locus-tag	class	description
BSQ44_RS00005	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_RS00010	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BSQ44_RS00030	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BSQ44_RS00035	COG0039	L-malate dehydrogenase activity
BSQ44_RS00040	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ44_RS00060	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BSQ44_RS00065	COG0567	Dehydrogenase, E1 component
BSQ44_RS00070	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_RS00075	COG1280	lysine exporter protein (LysE YggA)
BSQ44_RS00085	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BSQ44_RS00095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ44_RS00100	COG0564	pseudouridine synthase activity
BSQ44_RS00110	COG0346	lactoylglutathione lyase activity
BSQ44_RS00115	COG0217	transcriptional regulatory protein
BSQ44_RS00130	COG4221	oxidoreductase activity
BSQ44_RS00145	COG1132	(ABC) transporter
BSQ44_RS00155	COG1473	amidohydrolase
BSQ44_RS00195	COG1272	protein, Hemolysin III
BSQ44_RS00205	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_RS00245	COG0583	DNA-binding transcription factor activity
BSQ44_RS00250	COG2223	nitrite transmembrane transporter activity
BSQ44_RS00255	COG0137	argininosuccinate synthase activity
BSQ44_RS00270	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS00290	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BSQ44_RS00295	COG1329	Transcriptional regulator
BSQ44_RS00300	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BSQ44_RS00310	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS00325	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BSQ44_RS00345	COG0488	(ABC) transporter
BSQ44_RS00375	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_RS00380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS00415	COG0683	leucine binding
BSQ44_RS00420	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BSQ44_RS00440	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BSQ44_RS00450	COG1872	DUF167
BSQ44_RS00460	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BSQ44_RS00470	COG0228	four-way junction DNA binding
BSQ44_RS00475	COG0287	Prephenate dehydrogenase
BSQ44_RS00475	COG1605	Chorismate mutase
BSQ44_RS00480	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BSQ44_RS00490	COG0456	acetyltransferase
BSQ44_RS00490	COG1846	Transcriptional regulator
BSQ44_RS00500	COG1846	Transcriptional regulator
BSQ44_RS00520	COG1704	LemA family
BSQ44_RS00545	COG0210	DNA helicase
BSQ44_RS00550	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_RS00605	COG3654	unkown
BSQ44_RS00615	COG0481	GTPase activity
BSQ44_RS00625	COG2832	Protein of unknown function (DUF454)
BSQ44_RS00640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS00645	COG0765	amino acid transport
BSQ44_RS00650	COG2813	Specifically methylates the guanine in position
BSQ44_RS00665	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BSQ44_RS00670	COG3706	GGDEF domain
BSQ44_RS00720	COG3541	Predicted nucleotidyltransferase
BSQ44_RS00725	COG3132	Protein of unknown function, DUF480
BSQ44_RS00740	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_RS00745	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BSQ44_RS00750	COG1764	response to oxidative stress
BSQ44_RS00755	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_RS00760	COG1946	Acyl-CoA thioesterase
BSQ44_RS00765	COG0347	Belongs to the P(II) protein family
BSQ44_RS00770	COG0004	ammonium transporteR
BSQ44_RS00775	COG2261	transglycosylase associated protein
BSQ44_RS00775	COG1674	ftsk spoiiie
BSQ44_RS00780	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BSQ44_RS00800	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS00815	COG2264	protein methyltransferase activity
BSQ44_RS00830	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BSQ44_RS00835	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BSQ44_RS00840	COG0181	hydroxymethylbilane synthase activity
BSQ44_RS00865	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_RS00865	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BSQ44_RS00875	COG0335	large ribosomal subunit rRNA binding
BSQ44_RS00880	COG1396	sequence-specific DNA binding
BSQ44_RS00880	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_RS00895	COG0336	Belongs to the RNA methyltransferase TrmD family
BSQ44_RS00900	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BSQ44_RS00905	COG4974	Belongs to the 'phage' integrase family
BSQ44_RS00960	COG0517	IMP dehydrogenase activity
BSQ44_RS00980	COG0129	dihydroxy-acid dehydratase activity
BSQ44_RS00990	COG4214	carbohydrate transport
BSQ44_RS01010	COG1879	ABC-type sugar transport system periplasmic component
BSQ44_RS01015	COG1129	ABC transporter
BSQ44_RS01020	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS01025	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS01030	COG2186	Transcriptional regulator
BSQ44_RS01035	COG3734	2-keto-3-deoxy-galactonokinase
BSQ44_RS01045	COG1082	Xylose isomerase domain protein TIM barrel
BSQ44_RS01050	COG0673	inositol 2-dehydrogenase activity
BSQ44_RS01065	COG1082	Xylose isomerase domain protein TIM barrel
BSQ44_RS01070	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_RS01080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_RS01085	COG3842	ATPase activity
BSQ44_RS01090	COG3842	ATPase activity
BSQ44_RS01105	COG1175	transmembrane transport
BSQ44_RS01120	COG5441	Belongs to the UPF0261 family
BSQ44_RS01125	COG5564	TIM-barrel signal transduction protein
BSQ44_RS01140	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BSQ44_RS01145	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_RS01145	COG1902	pentaerythritol trinitrate reductase activity
BSQ44_RS01155	COG5598	trimethylamine methyltransferase
BSQ44_RS01160	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS01185	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS01210	COG3588	fructose-bisphosphate aldolase
BSQ44_RS01220	COG0126	phosphoglycerate kinase activity
BSQ44_RS01250	COG3750	Belongs to the UPF0335 family
BSQ44_RS01260	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BSQ44_RS01270	COG0463	Glycosyl transferase, family 2
BSQ44_RS01295	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_RS01345	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BSQ44_RS01350	COG0495	leucyl-tRNA aminoacylation
BSQ44_RS01365	COG3971	2-oxopent-4-enoate hydratase activity
BSQ44_RS01370	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BSQ44_RS01395	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BSQ44_RS01400	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BSQ44_RS01405	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BSQ44_RS01410	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BSQ44_RS01415	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BSQ44_RS01420	COG0494	nUDIX hydrolase
BSQ44_RS01430	COG0793	Belongs to the peptidase S41A family
BSQ44_RS01440	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BSQ44_RS01445	COG0799	negative regulation of ribosome biogenesis
BSQ44_RS01455	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BSQ44_RS01465	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BSQ44_RS01470	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BSQ44_RS01475	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BSQ44_RS01485	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_RS01490	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BSQ44_RS01495	COG3743	rRNA binding
BSQ44_RS01495	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BSQ44_RS01525	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BSQ44_RS01530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS01540	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS01550	COG1802	Transcriptional regulator
BSQ44_RS01555	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BSQ44_RS01605	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS01625	COG0604	alcohol dehydrogenase
BSQ44_RS01625	COG3321	synthase
BSQ44_RS01625	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS01640	COG0640	Transcriptional regulator
BSQ44_RS01655	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BSQ44_RS01660	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BSQ44_RS01665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BSQ44_RS01670	COG0457	Tetratricopeptide repeat
BSQ44_RS01685	COG0469	pyruvate kinase activity
BSQ44_RS01705	COG1217	gtp-binding protein TYPA
BSQ44_RS01715	COG1994	Peptidase M50
BSQ44_RS01715	COG0517	IMP dehydrogenase activity
BSQ44_RS01740	COG0288	reversible hydration of carbon dioxide
BSQ44_RS01770	COG3152	Membrane
BSQ44_RS01775	COG0473	3-isopropylmalate dehydrogenase activity
BSQ44_RS01790	COG0066	3-isopropylmalate dehydratase activity
BSQ44_RS01830	COG0587	DNA-directed DNA polymerase activity
BSQ44_RS01835	COG2835	tetraacyldisaccharide 4'-kinase activity
BSQ44_RS01840	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BSQ44_RS01855	COG3971	2-oxopent-4-enoate hydratase activity
BSQ44_RS01870	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS01895	COG0357	Ribosomal RNA small subunit methyltransferase G
BSQ44_RS01900	COG0445	tRNA wobble uridine modification
BSQ44_RS01905	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BSQ44_RS01910	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BSQ44_RS01915	COG1981	membrane
BSQ44_RS01920	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BSQ44_RS01925	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BSQ44_RS01930	COG0424	maF-like protein
BSQ44_RS01935	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BSQ44_RS01940	COG0237	dephospho-CoA kinase activity
BSQ44_RS01945	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BSQ44_RS01950	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BSQ44_RS01955	COG3030	protein affecting phage T7 exclusion by the F plasmid
BSQ44_RS01975	COG1396	sequence-specific DNA binding
BSQ44_RS01975	COG3800	Transcriptional regulator
BSQ44_RS01985	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BSQ44_RS02000	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BSQ44_RS02005	COG0131	Imidazoleglycerol-phosphate dehydratase
BSQ44_RS02015	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BSQ44_RS02020	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BSQ44_RS02030	COG0107	imidazoleglycerol-phosphate synthase activity
BSQ44_RS02035	COG0140	phosphoribosyl-ATP diphosphatase activity
BSQ44_RS02040	COG1072	(Pantothenic acid kinase))
BSQ44_RS02055	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ44_RS02060	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS02070	COG1072	(Pantothenic acid kinase))
BSQ44_RS02085	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_RS02095	COG0006	proline dipeptidase activity
BSQ44_RS02100	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_RS02105	COG1802	Transcriptional regulator
BSQ44_RS02115	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_RS02115	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS02125	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS02130	COG2721	sulfolactate sulfo-lyase activity
BSQ44_RS02140	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BSQ44_RS02145	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BSQ44_RS02155	COG0443	Heat shock 70 kDa protein
BSQ44_RS02165	COG0484	heat shock protein binding
BSQ44_RS02170	COG3963	phosphatidate phosphatase activity
BSQ44_RS02190	COG0284	orotidine-5'-phosphate decarboxylase activity
BSQ44_RS02215	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BSQ44_RS02235	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BSQ44_RS02240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_RS02250	COG0071	Belongs to the small heat shock protein (HSP20) family
BSQ44_RS02260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_RS02265	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BSQ44_RS02270	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BSQ44_RS02275	COG1137	ATPase activity
BSQ44_RS02280	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BSQ44_RS02290	COG0616	signal peptide processing
BSQ44_RS02295	COG0776	regulation of translation
BSQ44_RS02305	COG2423	ornithine cyclodeaminase activity
BSQ44_RS02310	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BSQ44_RS02310	COG0116	Belongs to the methyltransferase superfamily
BSQ44_RS02320	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BSQ44_RS02325	COG0604	alcohol dehydrogenase
BSQ44_RS02340	COG1295	ribonuclease BN
BSQ44_RS02415	COG2340	Cysteine-rich secretory protein family
BSQ44_RS02440	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_RS02450	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_RS02450	COG2010	Cytochrome c
BSQ44_RS02455	COG2863	cytochrome
BSQ44_RS02470	COG0668	transmembrane transport
BSQ44_RS02475	COG0281	malic enzyme
BSQ44_RS02475	COG0280	phosphate acetyltransferase
BSQ44_RS02480	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BSQ44_RS02510	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BSQ44_RS02520	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BSQ44_RS02525	COG4149	molybdate abc transporter
BSQ44_RS02530	COG0725	ABC transporter, periplasmic molybdate-binding protein
BSQ44_RS02545	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ44_RS02545	COG0072	phenylalanine-tRNA ligase activity
BSQ44_RS02595	COG4964	Belongs to the GSP D family
BSQ44_RS02630	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BSQ44_RS02635	COG0791	NLP P60 protein
BSQ44_RS02640	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_RS02645	COG4172	Belongs to the ABC transporter superfamily
BSQ44_RS02660	COG4239	(ABC) transporter, permease
BSQ44_RS02665	COG4174	ABC transporter (Permease)
BSQ44_RS02675	COG4166	transmembrane transport
BSQ44_RS02690	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BSQ44_RS02700	COG2816	NAD+ diphosphatase activity
BSQ44_RS02720	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ44_RS02755	COG1877	trehalose-phosphatase activity
BSQ44_RS02770	COG0366	Alpha amylase catalytic
BSQ44_RS02790	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BSQ44_RS02815	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BSQ44_RS02835	COG2094	Belongs to the DNA glycosylase MPG family
BSQ44_RS02840	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS02865	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS02870	COG3387	PFAM Glycoside hydrolase 15-related
BSQ44_RS02875	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_RS02880	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BSQ44_RS02895	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BSQ44_RS02905	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BSQ44_RS02910	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_RS02915	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BSQ44_RS02920	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_RS02925	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BSQ44_RS02935	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BSQ44_RS02940	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS02950	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BSQ44_RS02960	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS02965	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS02970	COG3845	ABC transporter
BSQ44_RS02975	COG1454	alcohol dehydrogenase
BSQ44_RS02985	COG2900	Belongs to the SlyX family
BSQ44_RS03000	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_RS03005	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_RS03015	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ44_RS03025	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ44_RS03030	COG5001	Diguanylate cyclase
BSQ44_RS03035	COG2813	Specifically methylates the guanine in position
BSQ44_RS03040	COG1185	polyribonucleotide nucleotidyltransferase activity
BSQ44_RS03045	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BSQ44_RS03055	COG0598	Magnesium transport protein CorA
BSQ44_RS03060	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BSQ44_RS03065	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BSQ44_RS03070	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BSQ44_RS03085	COG0779	Required for maturation of 30S ribosomal subunits
BSQ44_RS03110	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_RS03115	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS03145	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BSQ44_RS03155	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BSQ44_RS03160	COG0268	Binds directly to 16S ribosomal RNA
BSQ44_RS03170	COG1388	LysM domain
BSQ44_RS03170	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS03175	COG0366	Alpha amylase catalytic
BSQ44_RS03190	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BSQ44_RS03195	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BSQ44_RS03200	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BSQ44_RS03205	COG0728	peptidoglycan biosynthetic process
BSQ44_RS03220	COG0180	Tryptophanyl-tRNA synthetase
BSQ44_RS03230	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BSQ44_RS03235	COG0450	alkyl hydroperoxide reductase
BSQ44_RS03255	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS03260	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BSQ44_RS03270	COG1643	Atp-dependent helicase
BSQ44_RS03275	COG4136	ATPase activity
BSQ44_RS03280	COG4135	transport system, permease component
BSQ44_RS03285	COG4134	Bacterial extracellular solute-binding protein
BSQ44_RS03295	COG2188	Transcriptional regulator
BSQ44_RS03300	COG3624	Phosphonate C-P lyase system protein PhnG
BSQ44_RS03305	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BSQ44_RS03310	COG3626	phosphonate metabolism
BSQ44_RS03325	COG3627	carbon phosphorus lyase activity
BSQ44_RS03330	COG4107	phosphonate C-P lyase system protein PhnK
BSQ44_RS03335	COG4778	phosphonate C-P lyase system protein PhnL
BSQ44_RS03345	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BSQ44_RS03360	COG3639	organic phosphonate transmembrane transporter activity
BSQ44_RS03365	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
BSQ44_RS03370	COG3454	Phosphonate metabolism
BSQ44_RS03425	COG0693	protein deglycase activity
BSQ44_RS03430	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BSQ44_RS03435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_RS03440	COG0756	dUTP diphosphatase activity
BSQ44_RS03455	COG2814	Major facilitator Superfamily
BSQ44_RS03470	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BSQ44_RS03475	COG0746	molybdenum cofactor guanylyltransferase activity
BSQ44_RS03500	COG1968	undecaprenyl-diphosphatase activity
BSQ44_RS03510	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BSQ44_RS03520	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
BSQ44_RS03525	COG1803	Methylglyoxal synthase
BSQ44_RS03530	COG0837	glucose binding
BSQ44_RS03535	COG1132	(ABC) transporter
BSQ44_RS03540	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BSQ44_RS03545	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BSQ44_RS03565	COG0840	transmembrane signaling receptor activity
BSQ44_RS03570	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_RS03575	COG1702	phosphate starvation-inducible protein PhoH
BSQ44_RS03595	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BSQ44_RS03600	COG1396	sequence-specific DNA binding
BSQ44_RS03605	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BSQ44_RS03610	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BSQ44_RS03620	COG0019	diaminopimelate decarboxylase activity
BSQ44_RS03630	COG0165	Argininosuccinate lyase
BSQ44_RS03635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_RS03645	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_RS03645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_RS03650	COG2733	membrane
BSQ44_RS03665	COG0588	phosphoglycerate mutase activity
BSQ44_RS03680	COG1309	transcriptional regulator
BSQ44_RS03690	COG1131	(ABC) transporter
BSQ44_RS03695	COG0842	Transport permease protein
BSQ44_RS03705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_RS03710	COG1024	Enoyl-CoA hydratase
BSQ44_RS03720	COG1715	Restriction endonuclease
BSQ44_RS03860	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_RS03890	COG1475	DNA binding
BSQ44_RS04000	COG1388	LysM domain
BSQ44_RS04000	COG0791	NLP P60 protein
BSQ44_RS04035	COG1238	metal cluster binding
BSQ44_RS04055	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BSQ44_RS04060	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BSQ44_RS04065	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BSQ44_RS04070	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BSQ44_RS04075	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BSQ44_RS04110	COG0697	spore germination
BSQ44_RS04130	COG1309	transcriptional regulator
BSQ44_RS04135	COG0583	DNA-binding transcription factor activity
BSQ44_RS04150	COG0022	dehydrogenase e1 component
BSQ44_RS04155	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BSQ44_RS04165	COG1309	transcriptional regulator
BSQ44_RS04170	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS04195	COG1609	Transcriptional regulator
BSQ44_RS04200	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS04205	COG1309	transcriptional regulator
BSQ44_RS04210	COG1024	Enoyl-CoA hydratase
BSQ44_RS04225	COG0697	spore germination
BSQ44_RS04235	COG3002	Belongs to the UPF0753 family
BSQ44_RS04250	COG0583	DNA-binding transcription factor activity
BSQ44_RS04260	COG2030	dehydratase
BSQ44_RS04270	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS04275	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS04285	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04300	COG1022	Amp-dependent synthetase and ligase
BSQ44_RS04310	COG1024	Enoyl-CoA hydratase
BSQ44_RS04355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_RS04360	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_RS04360	COG0596	Alpha beta hydrolase
BSQ44_RS04365	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS04385	COG1396	sequence-specific DNA binding
BSQ44_RS04390	COG4166	transmembrane transport
BSQ44_RS04395	COG0601	transmembrane transport
BSQ44_RS04400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS04405	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS04410	COG4608	Belongs to the ABC transporter superfamily
BSQ44_RS04425	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
BSQ44_RS04425	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
BSQ44_RS04455	COG2079	MmgE PrpD family protein
BSQ44_RS04470	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS04475	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS04480	COG1802	Transcriptional regulator
BSQ44_RS04490	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_RS04500	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS04515	COG0583	DNA-binding transcription factor activity
BSQ44_RS04520	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS04530	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BSQ44_RS04535	COG0418	dihydroorotase activity
BSQ44_RS04540	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04545	COG4603	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04550	COG3845	ABC transporter
BSQ44_RS04565	COG0628	permease
BSQ44_RS04575	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_RS04625	COG3568	Endonuclease Exonuclease Phosphatase
BSQ44_RS04635	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ44_RS04640	COG2032	superoxide dismutase activity
BSQ44_RS04675	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS04700	COG0747	negative chemotaxis
BSQ44_RS04705	COG2186	Transcriptional regulator
BSQ44_RS04715	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS04725	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS04735	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04755	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04765	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS04775	COG1129	ABC transporter
BSQ44_RS04780	COG0037	tRNA processing
BSQ44_RS04780	COG0590	tRNA wobble adenosine to inosine editing
BSQ44_RS04825	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BSQ44_RS04830	COG0628	permease
BSQ44_RS04840	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_RS04845	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BSQ44_RS04850	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BSQ44_RS04880	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BSQ44_RS04885	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_RS04890	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BSQ44_RS04895	COG0110	maltose O-acetyltransferase activity
BSQ44_RS04900	COG0706	membrane insertase activity
BSQ44_RS04905	COG0594	ribonuclease P activity
BSQ44_RS04910	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BSQ44_RS04940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS04945	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS04950	COG1177	transmembrane transport
BSQ44_RS04965	COG3842	ATPase activity
BSQ44_RS04985	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BSQ44_RS05005	COG0242	peptide deformylase activity
BSQ44_RS05015	COG1487	ribonuclease activity
BSQ44_RS05020	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BSQ44_RS05030	COG0101	tRNA pseudouridine synthase activity
BSQ44_RS05040	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_RS05050	COG2171	N-acyltransferase activity
BSQ44_RS05065	COG3706	GGDEF domain
BSQ44_RS05075	COG0477	Major facilitator Superfamily
BSQ44_RS05090	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BSQ44_RS05140	COG3685	Protein conserved in bacteria
BSQ44_RS05145	COG1116	anion transmembrane transporter activity
BSQ44_RS05150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS05165	COG0667	Aldo Keto reductase
BSQ44_RS05170	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BSQ44_RS05180	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS05185	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BSQ44_RS05190	COG2186	Transcriptional regulator
BSQ44_RS05205	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS05210	COG1904	glucuronate isomerase
BSQ44_RS05215	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BSQ44_RS05225	COG3386	PFAM SMP-30 Gluconolaconase
BSQ44_RS05230	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS05235	COG5001	Diguanylate cyclase
BSQ44_RS05240	COG0189	ligase activity
BSQ44_RS05270	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BSQ44_RS05275	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS05280	COG2205	protein histidine kinase activity
BSQ44_RS05290	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_RS05290	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ44_RS05300	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BSQ44_RS05305	COG2205	protein histidine kinase activity
BSQ44_RS05310	COG3178	'Phosphotransferase
BSQ44_RS05315	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BSQ44_RS05320	COG2887	Belongs to the helicase family. UvrD subfamily
BSQ44_RS05325	COG1074	ATP-dependent DNA helicase activity
BSQ44_RS05345	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BSQ44_RS05350	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BSQ44_RS05355	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BSQ44_RS05365	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BSQ44_RS05390	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BSQ44_RS05405	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BSQ44_RS05415	COG0133	tryptophan synthase activity
BSQ44_RS05430	COG0159	tryptophan synthase activity
BSQ44_RS05435	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BSQ44_RS05440	COG0285	dihydrofolate synthase activity
BSQ44_RS05470	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_RS05490	COG0659	secondary active sulfate transmembrane transporter activity
BSQ44_RS05520	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_RS05525	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS05530	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ44_RS05555	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS05570	COG0410	ABC transporter
BSQ44_RS05595	COG1648	precorrin-2 dehydrogenase activity
BSQ44_RS05595	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BSQ44_RS05605	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BSQ44_RS05610	COG0175	sulfate reduction
BSQ44_RS05640	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_RS05655	COG2860	membrane
BSQ44_RS05660	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BSQ44_RS05665	COG1420	regulation of RNA biosynthetic process
BSQ44_RS05670	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BSQ44_RS05680	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BSQ44_RS05685	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ44_RS05690	COG3237	CsbD-like
BSQ44_RS05695	COG0539	negative regulation of cytoplasmic translation
BSQ44_RS05700	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BSQ44_RS05710	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS05715	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BSQ44_RS05720	COG3842	ATPase activity
BSQ44_RS05725	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS05730	COG1177	transmembrane transport
BSQ44_RS05745	COG0154	amidase activity
BSQ44_RS05755	COG0840	transmembrane signaling receptor activity
BSQ44_RS05795	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_RS05850	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_RS05855	COG0829	nickel cation binding
BSQ44_RS05860	COG0831	urea catabolic process
BSQ44_RS05865	COG3813	Protein conserved in bacteria
BSQ44_RS05875	COG0832	Belongs to the urease beta subunit family
BSQ44_RS05885	COG0804	urea catabolic process
BSQ44_RS05910	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BSQ44_RS05920	COG0830	nickel cation binding
BSQ44_RS05930	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BSQ44_RS05940	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BSQ44_RS05950	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_RS05965	COG2124	cytochrome p450
BSQ44_RS05980	COG0792	nuclease activity
BSQ44_RS05985	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BSQ44_RS05990	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BSQ44_RS06025	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS06035	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS06040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS06045	COG0028	Belongs to the TPP enzyme family
BSQ44_RS06065	COG4589	Belongs to the CDS family
BSQ44_RS06080	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_RS06090	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
BSQ44_RS06095	COG1595	DNA-templated transcription, initiation
BSQ44_RS06115	COG0415	Belongs to the DNA photolyase family
BSQ44_RS06140	COG0544	peptidyl-prolyl cis-trans isomerase activity
BSQ44_RS06145	COG0316	Belongs to the HesB IscA family
BSQ44_RS06150	COG3791	Glutathione-dependent formaldehyde-activating
BSQ44_RS06155	COG0306	phosphate transporter
BSQ44_RS06165	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BSQ44_RS06175	COG0513	Belongs to the DEAD box helicase family
BSQ44_RS06180	COG2207	Transcriptional regulator
BSQ44_RS06185	COG3920	Histidine kinase
BSQ44_RS06190	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BSQ44_RS06195	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ44_RS06200	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ44_RS06215	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BSQ44_RS06225	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS06230	COG1129	ABC transporter
BSQ44_RS06255	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS06305	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS06330	COG0582	viral genome integration into host DNA
BSQ44_RS06360	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BSQ44_RS06395	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BSQ44_RS06415	COG0475	glutathione-regulated potassium exporter activity
BSQ44_RS06415	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_RS06430	COG0840	transmembrane signaling receptor activity
BSQ44_RS06440	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BSQ44_RS06445	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BSQ44_RS06450	COG1797	cobyrinic acid a,c-diamide synthase activity
BSQ44_RS06535	COG1492	cobalamin metabolic process
BSQ44_RS06540	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BSQ44_RS06560	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ44_RS06575	COG3384	dioxygenase
BSQ44_RS06580	COG1414	Transcriptional regulator
BSQ44_RS06590	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS06625	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_RS06630	COG1309	transcriptional regulator
BSQ44_RS06655	COG5507	3-demethylubiquinone-9 3-methyltransferase
BSQ44_RS06660	COG1597	lipid kinase activity
BSQ44_RS06665	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ44_RS06665	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ44_RS06675	COG0735	belongs to the Fur family
BSQ44_RS06710	COG0156	8-amino-7-oxononanoate synthase activity
BSQ44_RS06725	COG1228	amidohydrolase
BSQ44_RS06730	COG2986	histidine ammonia-lyase
BSQ44_RS06740	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BSQ44_RS06750	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_RS06760	COG1393	Belongs to the ArsC family
BSQ44_RS06770	COG0640	Transcriptional regulator
BSQ44_RS06780	COG2085	NADP oxidoreductase coenzyme F420-dependent
BSQ44_RS06800	COG0582	viral genome integration into host DNA
BSQ44_RS06825	COG2309	aminopeptidase activity
BSQ44_RS07015	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BSQ44_RS07020	COG0477	Major facilitator Superfamily
BSQ44_RS07025	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BSQ44_RS07045	COG1160	GTP binding
BSQ44_RS07060	COG0356	it plays a direct role in the translocation of protons across the membrane
BSQ44_RS07065	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BSQ44_RS07070	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BSQ44_RS07075	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BSQ44_RS07080	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BSQ44_RS07090	COG0009	L-threonylcarbamoyladenylate synthase
BSQ44_RS07100	COG0751	glycine-tRNA ligase activity
BSQ44_RS07110	COG0752	glycyl-tRNA synthetase alpha subunit
BSQ44_RS07130	COG0142	geranyltranstransferase activity
BSQ44_RS07155	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BSQ44_RS07160	COG0521	Mo-molybdopterin cofactor biosynthetic process
BSQ44_RS07185	COG0151	Belongs to the GarS family
BSQ44_RS07215	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS07235	COG0259	pyridoxamine-phosphate oxidase activity
BSQ44_RS07245	COG0484	heat shock protein binding
BSQ44_RS07250	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ44_RS07265	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BSQ44_RS07285	COG0123	including yeast histone deacetylase and acetoin utilization protein
BSQ44_RS07290	COG1722	exodeoxyribonuclease VII activity
BSQ44_RS07305	COG1741	Belongs to the pirin family
BSQ44_RS07310	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BSQ44_RS07320	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BSQ44_RS07325	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BSQ44_RS07330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_RS07335	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BSQ44_RS07340	COG0312	modulator of DNA gyrase
BSQ44_RS07355	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_RS07360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_RS07365	COG0109	protoheme IX farnesyltransferase activity
BSQ44_RS07370	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BSQ44_RS07390	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BSQ44_RS07395	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BSQ44_RS07400	COG0328	RNA-DNA hybrid ribonuclease activity
BSQ44_RS07405	COG0678	peroxiredoxin activity
BSQ44_RS07415	COG1678	Uncharacterized ACR, COG1678
BSQ44_RS07425	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_RS07430	COG0612	Peptidase, M16
BSQ44_RS07460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_RS07465	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BSQ44_RS07490	COG1196	nuclear chromosome segregation
BSQ44_RS07525	COG1174	glycine betaine transport
BSQ44_RS07530	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS07545	COG0628	permease
BSQ44_RS07555	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BSQ44_RS07555	COG0574	Belongs to the PEP-utilizing enzyme family
BSQ44_RS07590	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_RS07600	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_RS07605	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BSQ44_RS07610	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_RS07630	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_RS07630	COG2010	Cytochrome c
BSQ44_RS07635	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_RS07660	COG3932	Exopolysaccharide synthesis, ExoD
BSQ44_RS07670	COG1268	BioY protein
BSQ44_RS07685	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS07720	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS07730	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS07760	COG0683	leucine binding
BSQ44_RS07770	COG5002	protein histidine kinase activity
BSQ44_RS07770	COG3447	MASE1 domain protein
BSQ44_RS07770	COG5001	Diguanylate cyclase
BSQ44_RS07780	COG1129	ABC transporter
BSQ44_RS07815	COG5002	protein histidine kinase activity
BSQ44_RS07860	COG2186	Transcriptional regulator
BSQ44_RS07870	COG1129	ABC transporter
BSQ44_RS07875	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS07880	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS07885	COG3386	PFAM SMP-30 Gluconolaconase
BSQ44_RS07895	COG1129	ABC transporter
BSQ44_RS07900	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS07910	COG0667	Aldo Keto reductase
BSQ44_RS07915	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BSQ44_RS07935	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS07940	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_RS07965	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS07980	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS07995	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS08010	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS08015	COG2072	flavoprotein involved in K transport
BSQ44_RS08045	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_RS08050	COG1802	Transcriptional regulator
BSQ44_RS08085	COG1137	ATPase activity
BSQ44_RS08090	COG1136	(ABC) transporter
BSQ44_RS08095	COG0673	inositol 2-dehydrogenase activity
BSQ44_RS08100	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS08150	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS08235	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_RS08240	COG0459	protein refolding
BSQ44_RS08260	COG0482	sulfurtransferase activity
BSQ44_RS08320	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS08330	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS08345	COG3842	ATPase activity
BSQ44_RS08365	COG4118	positive regulation of growth
BSQ44_RS08395	COG1435	thymidine kinase activity
BSQ44_RS08415	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BSQ44_RS08425	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_RS08440	COG0512	Glutamine amidotransferase of anthranilate synthase
BSQ44_RS08440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BSQ44_RS08445	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BSQ44_RS08455	COG0788	formyltetrahydrofolate deformylase activity
BSQ44_RS08465	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS08475	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ44_RS08495	COG0058	SHG alpha-glucan phosphorylase activity
BSQ44_RS08500	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BSQ44_RS08505	COG0297	glycogen (starch) synthase activity
BSQ44_RS08510	COG0033	Phosphoglucomutase
BSQ44_RS08530	COG2264	protein methyltransferase activity
BSQ44_RS08575	COG3750	Belongs to the UPF0335 family
BSQ44_RS08580	COG0629	single-stranded DNA binding
BSQ44_RS08805	COG3299	homolog of phage Mu protein gp47
BSQ44_RS08880	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_RS08880	COG2755	lipolytic protein G-D-S-L family
BSQ44_RS08885	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_RS08885	COG2755	lipolytic protein G-D-S-L family
BSQ44_RS08910	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS08915	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_RS08930	COG3119	arylsulfatase activity
BSQ44_RS08935	COG1309	transcriptional regulator
BSQ44_RS08955	COG0183	Belongs to the thiolase family
BSQ44_RS08960	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS08985	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_RS08995	COG2755	lipolytic protein G-D-S-L family
BSQ44_RS08995	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_RS09010	COG0433	COG0433 Predicted ATPase
BSQ44_RS09020	COG1388	LysM domain
BSQ44_RS09020	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS09030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_RS09035	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BSQ44_RS09045	COG2010	Cytochrome c
BSQ44_RS09060	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ44_RS09060	COG2111	Na H antiporter
BSQ44_RS09065	COG2111	Na H antiporter
BSQ44_RS09070	COG1006	Multisubunit Na H antiporter MnhC subunit
BSQ44_RS09075	COG0651	ATP synthesis coupled electron transport
BSQ44_RS09080	COG1863	multisubunit Na H antiporter MnhE subunit
BSQ44_RS09085	COG2212	antiporter activity
BSQ44_RS09090	COG1320	monovalent cation:proton antiporter activity
BSQ44_RS09095	COG4957	zinc ion binding
BSQ44_RS09105	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BSQ44_RS09115	COG2166	iron-sulfur cluster assembly
BSQ44_RS09125	COG2205	protein histidine kinase activity
BSQ44_RS09130	COG3409	Peptidoglycan-binding domain 1 protein
BSQ44_RS09130	COG3429	Glucose-6-phosphate dehydrogenase subunit
BSQ44_RS09165	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_RS09220	COG4235	cytochrome complex assembly
BSQ44_RS09225	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BSQ44_RS09230	COG1138	Cytochrome C-type biogenesis protein
BSQ44_RS09235	COG3088	subunit of a heme lyase
BSQ44_RS09245	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_RS09250	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS09260	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BSQ44_RS09265	COG2202	Pas domain
BSQ44_RS09265	COG2205	protein histidine kinase activity
BSQ44_RS09270	COG0308	aminopeptidase N
BSQ44_RS09300	COG0625	glutathione transferase activity
BSQ44_RS09345	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BSQ44_RS09375	COG0596	Alpha beta hydrolase
BSQ44_RS09395	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BSQ44_RS09400	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS09405	COG1309	transcriptional regulator
BSQ44_RS09410	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ44_RS09430	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS09455	COG2423	ornithine cyclodeaminase activity
BSQ44_RS09465	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS09490	COG2188	Transcriptional regulator
BSQ44_RS09520	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ44_RS09525	COG0066	3-isopropylmalate dehydratase activity
BSQ44_RS09530	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BSQ44_RS09565	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_RS09585	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS09610	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BSQ44_RS09630	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS09640	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS09645	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS09655	COG2267	carboxylic ester hydrolase activity
BSQ44_RS09660	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_RS09665	COG0625	glutathione transferase activity
BSQ44_RS09685	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_RS09700	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS09705	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS09710	COG2030	dehydratase
BSQ44_RS09725	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_RS09750	COG1136	(ABC) transporter
BSQ44_RS09755	COG0577	efflux transmembrane transporter activity
BSQ44_RS09780	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_RS09795	COG0765	amino acid transport
BSQ44_RS09800	COG0765	amino acid transport
BSQ44_RS09805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS09810	COG0583	DNA-binding transcription factor activity
BSQ44_RS09830	COG2301	Belongs to the HpcH HpaI aldolase family
BSQ44_RS09840	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS09845	COG1131	(ABC) transporter
BSQ44_RS09865	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS09905	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS09965	COG1064	alcohol dehydrogenase
BSQ44_RS09970	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_RS09995	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS10015	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS10040	COG0596	Alpha beta hydrolase
BSQ44_RS10050	COG0667	Aldo Keto reductase
BSQ44_RS10055	COG2188	Transcriptional regulator
BSQ44_RS10070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS10080	COG0655	NAD(P)H dehydrogenase (quinone) activity
BSQ44_RS10085	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_RS10095	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_RS10125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_RS10170	COG0741	lytic transglycosylase activity
BSQ44_RS10175	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_RS10180	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BSQ44_RS10230	COG1573	uracil-dna glycosylase
BSQ44_RS10240	COG1758	RNA polymerase activity
BSQ44_RS10255	COG0736	holo-[acyl-carrier-protein] synthase activity
BSQ44_RS10260	COG0681	Belongs to the peptidase S26 family
BSQ44_RS10265	COG0571	ribonuclease III activity
BSQ44_RS10270	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BSQ44_RS10275	COG0456	acetyltransferase
BSQ44_RS10275	COG1846	Transcriptional regulator
BSQ44_RS10285	COG1381	Involved in DNA repair and RecF pathway recombination
BSQ44_RS10310	COG0668	transmembrane transport
BSQ44_RS10325	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BSQ44_RS10335	COG0850	regulation of cytokinetic process
BSQ44_RS10345	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BSQ44_RS10350	COG0354	folic acid binding
BSQ44_RS10375	COG2135	peptidase activity
BSQ44_RS10380	COG0215	cysteine-tRNA ligase activity
BSQ44_RS10385	COG2852	Protein conserved in bacteria
BSQ44_RS10400	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_RS10420	COG0583	DNA-binding transcription factor activity
BSQ44_RS10435	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_RS10440	COG3710	Transcriptional regulator
BSQ44_RS10465	COG5265	(ABC) transporter
BSQ44_RS10475	COG3920	Histidine kinase
BSQ44_RS10475	COG2202	Pas domain
BSQ44_RS10480	COG4251	negative regulation of phosphorylation
BSQ44_RS10485	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
BSQ44_RS10490	COG0688	phosphatidylethanolamine metabolic process
BSQ44_RS10495	COG1183	phosphatidylcholine synthase activity
BSQ44_RS10505	COG0251	oxidation-reduction process
BSQ44_RS10520	COG0640	Transcriptional regulator
BSQ44_RS10530	COG0785	Cytochrome C biogenesis protein
BSQ44_RS10565	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BSQ44_RS10575	COG2391	methyltransferase activity
BSQ44_RS10580	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS10590	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BSQ44_RS10605	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BSQ44_RS10610	COG0305	Participates in initiation and elongation during chromosome replication
BSQ44_RS10615	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_RS10620	COG0359	binds to the 23S rRNA
BSQ44_RS10630	COG0360	Binds together with S18 to 16S ribosomal RNA
BSQ44_RS10640	COG1473	amidohydrolase
BSQ44_RS10645	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BSQ44_RS10655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_RS10660	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ44_RS10665	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BSQ44_RS10670	COG1561	YicC-like family, N-terminal region
BSQ44_RS10675	COG0194	GDP metabolic process
BSQ44_RS10680	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BSQ44_RS10685	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BSQ44_RS10710	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BSQ44_RS10725	COG1024	Enoyl-CoA hydratase
BSQ44_RS10730	COG0488	(ABC) transporter
BSQ44_RS10755	COG0105	UTP biosynthetic process
BSQ44_RS10765	COG0314	molybdopterin synthase activity
BSQ44_RS10775	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BSQ44_RS10780	COG0322	excinuclease ABC activity
BSQ44_RS10785	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS10795	COG0625	glutathione transferase activity
BSQ44_RS10810	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BSQ44_RS10815	COG0243	molybdopterin cofactor binding
BSQ44_RS10820	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BSQ44_RS10825	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BSQ44_RS10865	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BSQ44_RS10875	COG1088	dTDP-glucose 4,6-dehydratase activity
BSQ44_RS10880	COG1091	dTDP-4-dehydrorhamnose reductase activity
BSQ44_RS10930	COG0811	peptide transport
BSQ44_RS10950	COG3720	iron ion transport
BSQ44_RS10955	COG4558	Periplasmic binding protein
BSQ44_RS10960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ44_RS10965	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BSQ44_RS10980	COG0297	glycogen (starch) synthase activity
BSQ44_RS11010	COG1612	heme a metabolic process
BSQ44_RS11020	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BSQ44_RS11025	COG0010	Belongs to the arginase family
BSQ44_RS11035	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BSQ44_RS11040	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BSQ44_RS11055	COG1024	Enoyl-CoA hydratase
BSQ44_RS11075	COG1832	CoA-binding protein
BSQ44_RS11105	COG0776	regulation of translation
BSQ44_RS11115	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BSQ44_RS11120	COG0740	serine-type endopeptidase activity
BSQ44_RS11130	COG2124	cytochrome p450
BSQ44_RS11150	COG3383	formate dehydrogenase (NAD+) activity
BSQ44_RS11155	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BSQ44_RS11185	COG4251	negative regulation of phosphorylation
BSQ44_RS11190	COG0784	Response regulator, receiver
BSQ44_RS11195	COG2202	Pas domain
BSQ44_RS11195	COG3920	Histidine kinase
BSQ44_RS11200	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS11205	COG3025	triphosphatase activity
BSQ44_RS11215	COG1522	sequence-specific DNA binding
BSQ44_RS11230	COG2271	Major facilitator Superfamily
BSQ44_RS11245	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BSQ44_RS11265	COG0683	leucine binding
BSQ44_RS11280	COG1137	ATPase activity
BSQ44_RS11290	COG0657	acetylesterase activity
BSQ44_RS11300	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS11310	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_RS11325	COG0747	negative chemotaxis
BSQ44_RS11330	COG0601	transmembrane transport
BSQ44_RS11335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS11340	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS11350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS11355	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BSQ44_RS11375	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ44_RS11415	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_RS11430	COG0525	valine-tRNA ligase activity
BSQ44_RS11440	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BSQ44_RS11450	COG0708	Exodeoxyribonuclease III
BSQ44_RS11455	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_RS11460	COG3657	addiction module killer protein
BSQ44_RS11465	COG0174	glutamine synthetase
BSQ44_RS11470	COG0347	Belongs to the P(II) protein family
BSQ44_RS11475	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BSQ44_RS11475	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BSQ44_RS11485	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BSQ44_RS11495	COG1671	Belongs to the UPF0178 family
BSQ44_RS11540	COG3618	amidohydrolase
BSQ44_RS11580	COG2169	Transcriptional regulator
BSQ44_RS11580	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_RS11585	COG1609	Transcriptional regulator
BSQ44_RS11595	COG1175	transmembrane transport
BSQ44_RS11600	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS11615	COG3842	ATPase activity
BSQ44_RS11635	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BSQ44_RS11640	COG1024	Enoyl-CoA hydratase
BSQ44_RS11690	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BSQ44_RS11695	COG0300	oxidoreductase activity
BSQ44_RS11700	COG2207	Transcriptional regulator
BSQ44_RS11710	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BSQ44_RS11750	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BSQ44_RS11760	COG0511	ligase activity, forming carbon-carbon bonds
BSQ44_RS11775	COG0436	Aminotransferase
BSQ44_RS11780	COG2066	Belongs to the glutaminase family
BSQ44_RS11785	COG1530	ribonuclease E activity
BSQ44_RS11790	COG0860	N-Acetylmuramoyl-L-alanine amidase
BSQ44_RS11795	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_RS11805	COG0739	heme binding
BSQ44_RS11810	COG2833	Protein of unknown function (DUF455)
BSQ44_RS11815	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BSQ44_RS11825	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BSQ44_RS11830	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BSQ44_RS11835	COG2808	Putative FMN-binding domain
BSQ44_RS11840	COG2945	thiolester hydrolase activity
BSQ44_RS11850	COG0719	Fe-S assembly protein
BSQ44_RS11860	COG0396	ATPase activity
BSQ44_RS11865	COG0719	Fe-S assembly protein
BSQ44_RS11870	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BSQ44_RS11875	COG2151	metal-sulfur cluster biosynthetic enzyme
BSQ44_RS11885	COG2003	Belongs to the UPF0758 family
BSQ44_RS11890	COG0024	Methionine aminopeptidase
BSQ44_RS11925	COG0601	transmembrane transport
BSQ44_RS11930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS11960	COG2095	MarC family integral membrane protein
BSQ44_RS11965	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_RS12010	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS12020	COG3483	tryptophan 2,3-dioxygenase activity
BSQ44_RS12045	COG1024	Enoyl-CoA hydratase
BSQ44_RS12055	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS12065	COG0174	glutamine synthetase
BSQ44_RS12075	COG3384	dioxygenase
BSQ44_RS12085	COG0586	Pfam SNARE associated Golgi protein
BSQ44_RS12095	COG0210	DNA helicase
BSQ44_RS12120	COG3335	DDE superfamily endonuclease
BSQ44_RS12140	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ44_RS12140	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ44_RS12145	COG0509	glycine decarboxylation via glycine cleavage system
BSQ44_RS12150	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS12160	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BSQ44_RS12175	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_RS12185	COG2321	neutral zinc metallopeptidase
BSQ44_RS12195	COG0505	Belongs to the CarA family
BSQ44_RS12205	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BSQ44_RS12210	COG0840	transmembrane signaling receptor activity
BSQ44_RS12215	COG0730	response to heat
BSQ44_RS12230	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BSQ44_RS12235	COG2202	Pas domain
BSQ44_RS12235	COG2205	protein histidine kinase activity
BSQ44_RS12245	COG1573	uracil-dna glycosylase
BSQ44_RS12250	COG1522	sequence-specific DNA binding
BSQ44_RS12270	COG2084	Dehydrogenase
BSQ44_RS12285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS12295	COG2814	Major facilitator Superfamily
BSQ44_RS12310	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BSQ44_RS12345	COG0785	Cytochrome C biogenesis protein
BSQ44_RS12350	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BSQ44_RS12355	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BSQ44_RS12375	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BSQ44_RS12385	COG0784	Response regulator, receiver
BSQ44_RS12395	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BSQ44_RS12415	COG0557	exoribonuclease II activity
BSQ44_RS12420	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BSQ44_RS12420	COG1754	DNA topoisomerase type I activity
BSQ44_RS12445	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_RS12450	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_RS12460	COG0649	NAD binding
BSQ44_RS12470	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BSQ44_RS12475	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BSQ44_RS12495	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BSQ44_RS12505	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_RS12515	COG0713	ATP synthesis coupled electron transport
BSQ44_RS12530	COG1007	ATP synthesis coupled electron transport
BSQ44_RS12545	COG0346	lactoylglutathione lyase activity
BSQ44_RS12555	COG0442	prolyl-tRNA aminoacylation
BSQ44_RS12560	COG4591	ABC-type transport system involved in lipoprotein release permease component
BSQ44_RS12570	COG0405	Gamma-glutamyltransferase
BSQ44_RS12575	COG0321	lipoyl(octanoyl) transferase activity
BSQ44_RS12600	COG2239	Acts as a magnesium transporter
BSQ44_RS12630	COG0656	L-ascorbic acid biosynthetic process
BSQ44_RS12675	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_RS12680	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BSQ44_RS12685	COG1127	ABC transporter
BSQ44_RS12715	COG0633	Ferredoxin
BSQ44_RS12720	COG0492	ferredoxin-NADP+ reductase activity
BSQ44_RS12730	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BSQ44_RS12735	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BSQ44_RS12740	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BSQ44_RS12750	COG3768	UPF0283 membrane protein
BSQ44_RS12755	COG3106	COG3106 Predicted ATPase
BSQ44_RS12800	COG1129	ABC transporter
BSQ44_RS12820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ44_RS12825	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ44_RS12830	COG1121	(ABC) transporter
BSQ44_RS12835	COG0803	Belongs to the bacterial solute-binding protein 9 family
BSQ44_RS12845	COG2885	chlorophyll binding
BSQ44_RS12860	COG4993	Dehydrogenase
BSQ44_RS12870	COG2188	Transcriptional regulator
BSQ44_RS12875	COG2721	sulfolactate sulfo-lyase activity
BSQ44_RS12895	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_RS12900	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_RS12915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_RS12925	COG1858	cytochrome C peroxidase
BSQ44_RS12935	COG1522	sequence-specific DNA binding
BSQ44_RS12940	COG0506	proline dehydrogenase activity
BSQ44_RS12940	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_RS12940	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_RS12960	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_RS12980	COG1309	transcriptional regulator
BSQ44_RS13005	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BSQ44_RS13010	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_RS13030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BSQ44_RS13035	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BSQ44_RS13055	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BSQ44_RS13060	COG3791	Glutathione-dependent formaldehyde-activating
BSQ44_RS13065	COG0343	queuine tRNA-ribosyltransferase activity
BSQ44_RS13075	COG2308	Evidence 4 Homologs of previously reported genes of
BSQ44_RS13100	COG1846	Transcriptional regulator
BSQ44_RS13125	COG3842	ATPase activity
BSQ44_RS13135	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS13150	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BSQ44_RS13155	COG0540	Belongs to the ATCase OTCase family
BSQ44_RS13160	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BSQ44_RS13165	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BSQ44_RS13170	COG0758	DNA mediated transformation
BSQ44_RS13180	COG0174	glutamine synthetase
BSQ44_RS13190	COG3706	GGDEF domain
BSQ44_RS13205	COG2268	Band 7 protein
BSQ44_RS13240	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS13250	COG0384	phenazine biosynthesis protein PhzF
BSQ44_RS13260	COG0577	efflux transmembrane transporter activity
BSQ44_RS13260	COG1136	(ABC) transporter
BSQ44_RS13265	COG0577	efflux transmembrane transporter activity
BSQ44_RS13265	COG1136	(ABC) transporter
BSQ44_RS13275	COG1121	(ABC) transporter
BSQ44_RS13280	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BSQ44_RS13300	COG4166	transmembrane transport
BSQ44_RS13330	COG0316	Belongs to the HesB IscA family
BSQ44_RS13335	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BSQ44_RS13340	COG0018	arginyl-trna synthetase
BSQ44_RS13350	COG1472	Belongs to the glycosyl hydrolase 3 family
BSQ44_RS13355	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BSQ44_RS13360	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BSQ44_RS13365	COG3842	ATPase activity
BSQ44_RS13370	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ44_RS13375	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ44_RS13380	COG0805	protein transport
BSQ44_RS13385	COG2223	nitrite transmembrane transporter activity
BSQ44_RS13390	COG2207	Transcriptional regulator
BSQ44_RS13415	COG2301	Belongs to the HpcH HpaI aldolase family
BSQ44_RS13435	COG0412	Dienelactone hydrolase
BSQ44_RS13455	COG0277	FAD linked oxidase domain protein
BSQ44_RS13465	COG1271	oxidase subunit
BSQ44_RS13470	COG1294	oxidase, subunit
BSQ44_RS13500	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BSQ44_RS13520	COG0330	HflC and HflK could
BSQ44_RS13530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_RS13540	COG0560	Phosphoserine phosphatase
BSQ44_RS13540	COG3830	Belongs to the UPF0237 family
BSQ44_RS13545	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BSQ44_RS13560	COG0028	Belongs to the TPP enzyme family
BSQ44_RS13570	COG0440	acetolactate synthase activity
BSQ44_RS13575	COG0187	DNA topoisomerase II activity
BSQ44_RS13585	COG4964	Belongs to the GSP D family
BSQ44_RS13625	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_RS13635	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ44_RS13645	COG0281	malic enzyme
BSQ44_RS13645	COG0280	phosphate acetyltransferase
BSQ44_RS13665	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BSQ44_RS13690	COG1278	Cold shock
BSQ44_RS13750	COG1252	NADH dehydrogenase
BSQ44_RS13755	COG1218	3'(2'),5'-bisphosphate nucleotidase
BSQ44_RS13765	COG0175	sulfate reduction
BSQ44_RS13825	COG0024	Methionine aminopeptidase
BSQ44_RS13840	COG0303	'Molybdopterin
BSQ44_RS13845	COG0315	cyclic pyranopterin monophosphate synthase activity
BSQ44_RS13850	COG0134	indole-3-glycerol-phosphate synthase activity
BSQ44_RS13855	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BSQ44_RS13865	COG0149	triose-phosphate isomerase activity
BSQ44_RS13880	COG0504	CTP synthase activity
BSQ44_RS13900	COG1686	Belongs to the peptidase S11 family
BSQ44_RS13905	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BSQ44_RS13920	COG0084	hydrolase, TatD family'
BSQ44_RS13965	COG0432	Pfam Uncharacterised protein family UPF0047
BSQ44_RS13985	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ44_RS14000	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS14010	COG3845	ABC transporter
BSQ44_RS14020	COG1183	phosphatidylcholine synthase activity
BSQ44_RS14025	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_RS14030	COG0679	Auxin Efflux Carrier
BSQ44_RS14050	COG4770	biotin carboxylase activity
BSQ44_RS14060	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BSQ44_RS14065	COG2989	Protein conserved in bacteria
BSQ44_RS14070	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BSQ44_RS14070	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BSQ44_RS14075	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS14090	COG1846	Transcriptional regulator
BSQ44_RS14095	COG0589	response to stress
BSQ44_RS14100	COG0596	Alpha beta hydrolase
BSQ44_RS14110	COG1278	Cold shock
BSQ44_RS14120	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BSQ44_RS14135	COG0154	amidase activity
BSQ44_RS14140	COG0667	Aldo Keto reductase
BSQ44_RS14165	COG0746	molybdenum cofactor guanylyltransferase activity
BSQ44_RS14170	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BSQ44_RS14170	COG3608	succinylglutamate desuccinylase aspartoacylase
BSQ44_RS14190	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BSQ44_RS14195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_RS14205	COG3191	aminopeptidase activity
BSQ44_RS14220	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BSQ44_RS14240	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BSQ44_RS14245	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BSQ44_RS14255	COG0047	phosphoribosylformylglycinamidine synthase activity
BSQ44_RS14285	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ44_RS14300	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BSQ44_RS14315	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BSQ44_RS14320	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BSQ44_RS14325	COG1024	Enoyl-CoA hydratase
BSQ44_RS14355	COG1862	Preprotein translocase
BSQ44_RS14370	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_RS14375	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BSQ44_RS14380	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BSQ44_RS14395	COG0697	spore germination
BSQ44_RS14425	COG0803	Belongs to the bacterial solute-binding protein 9 family
BSQ44_RS14430	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BSQ44_RS14455	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BSQ44_RS14460	COG0546	phosphoglycolate phosphatase activity
BSQ44_RS14465	COG1278	Cold shock
BSQ44_RS14470	COG2084	Dehydrogenase
BSQ44_RS14475	COG3300	MHYT domain
BSQ44_RS14475	COG5001	Diguanylate cyclase
BSQ44_RS14485	COG0436	Aminotransferase
BSQ44_RS14510	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ44_RS14520	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_RS14540	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BSQ44_RS14545	COG3422	double-strand break repair
BSQ44_RS14550	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BSQ44_RS14560	COG0302	gtp cyclohydrolase
BSQ44_RS14565	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BSQ44_RS14570	COG1752	Esterase of the alpha-beta hydrolase superfamily
BSQ44_RS14580	COG1494	fructose-1,6-bisphosphatase
BSQ44_RS14600	COG0436	Aminotransferase
BSQ44_RS14610	COG3243	poly(R)-hydroxyalkanoic acid synthase
BSQ44_RS14625	COG1414	Transcriptional regulator
BSQ44_RS14630	COG0006	proline dipeptidase activity
BSQ44_RS14635	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS14640	COG1177	transmembrane transport
BSQ44_RS14650	COG3842	ATPase activity
BSQ44_RS14675	COG0629	single-stranded DNA binding
BSQ44_RS14695	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS14695	COG1388	LysM domain
BSQ44_RS14700	COG2885	chlorophyll binding
BSQ44_RS14705	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BSQ44_RS14720	COG0372	Belongs to the citrate synthase family
BSQ44_RS14725	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ44_RS14730	COG3494	Protein of unknown function (DUF1009)
BSQ44_RS14735	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ44_RS14740	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ44_RS14750	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_RS14755	COG0750	zinc metalloprotease
BSQ44_RS14765	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BSQ44_RS14770	COG0233	cytoplasmic translational termination
BSQ44_RS14775	COG0528	UMP kinase activity
BSQ44_RS14780	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BSQ44_RS14785	COG0052	Belongs to the universal ribosomal protein uS2 family
BSQ44_RS14820	COG0537	adenosine 5'-monophosphoramidase activity
BSQ44_RS14840	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BSQ44_RS14850	COG1686	Belongs to the peptidase S11 family
BSQ44_RS14855	COG0484	heat shock protein binding
BSQ44_RS14865	COG1192	Involved in chromosome partitioning
BSQ44_RS14875	COG1760	l-serine dehydratase
BSQ44_RS14895	COG2226	methyltransferase
BSQ44_RS14900	COG0154	amidase activity
BSQ44_RS14910	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BSQ44_RS14915	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BSQ44_RS14920	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BSQ44_RS14935	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS14945	COG0737	Belongs to the 5'-nucleotidase family
BSQ44_RS14950	COG1196	nuclear chromosome segregation
BSQ44_RS14950	COG3264	Mechanosensitive ion channel
BSQ44_RS14955	COG3300	MHYT domain
BSQ44_RS14955	COG5001	Diguanylate cyclase
BSQ44_RS14965	COG0686	Belongs to the AlaDH PNT family
BSQ44_RS14980	COG2897	thiosulfate sulfurtransferase activity
BSQ44_RS15005	COG1058	Belongs to the CinA family
BSQ44_RS15005	COG1546	Belongs to the CinA family
BSQ44_RS15010	COG0655	NAD(P)H dehydrogenase (quinone) activity
BSQ44_RS15020	COG0596	Alpha beta hydrolase
BSQ44_RS15020	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_RS15035	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_RS15050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS15055	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_RS15095	COG1846	Transcriptional regulator
BSQ44_RS15125	COG1335	isochorismatase
BSQ44_RS15185	COG3956	TIGRFAM MazG family protein
BSQ44_RS15190	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BSQ44_RS15195	COG1923	regulation of RNA biosynthetic process
BSQ44_RS15200	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_RS15205	COG0569	domain protein
BSQ44_RS15210	COG2204	response regulator
BSQ44_RS15215	COG5000	phosphorelay sensor kinase activity
BSQ44_RS15220	COG2204	response regulator
BSQ44_RS15225	COG3852	Histidine kinase
BSQ44_RS15235	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BSQ44_RS15235	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BSQ44_RS15250	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BSQ44_RS15290	COG0784	Response regulator, receiver
BSQ44_RS15290	COG4191	Histidine kinase
BSQ44_RS15300	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BSQ44_RS15315	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_RS15325	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_RS15325	COG0022	dehydrogenase e1 component
BSQ44_RS15330	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BSQ44_RS15340	COG0148	phosphopyruvate hydratase activity
BSQ44_RS15355	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BSQ44_RS15375	COG1215	transferase activity, transferring glycosyl groups
BSQ44_RS15380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_RS15385	COG0625	glutathione transferase activity
BSQ44_RS15390	COG0747	negative chemotaxis
BSQ44_RS15400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS15490	COG0778	Nitroreductase
BSQ44_RS15500	COG0006	proline dipeptidase activity
BSQ44_RS15520	COG0646	methionine synthase
BSQ44_RS15520	COG1410	methionine synthase
BSQ44_RS15535	COG2304	oxidoreductase activity
BSQ44_RS15570	COG5598	trimethylamine methyltransferase
BSQ44_RS15575	COG5012	cobalamin binding
BSQ44_RS15610	COG0646	methionine synthase
BSQ44_RS15610	COG1410	methionine synthase
BSQ44_RS15625	COG0583	DNA-binding transcription factor activity
BSQ44_RS15655	COG1280	lysine exporter protein (LysE YggA)
BSQ44_RS15700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_RS15715	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BSQ44_RS15720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS15730	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_RS15730	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS15745	COG0583	DNA-binding transcription factor activity
BSQ44_RS15805	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_RS15810	COG2040	homocysteine
BSQ44_RS15870	COG2226	methyltransferase
BSQ44_RS15885	COG4176	ABC-type proline glycine betaine transport system permease component
BSQ44_RS15890	COG4175	Glycine betaine
BSQ44_RS15890	COG0517	IMP dehydrogenase activity
BSQ44_RS15930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS15945	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_RS15980	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BSQ44_RS15985	COG1309	transcriptional regulator
BSQ44_RS16000	COG1733	regulation of RNA biosynthetic process
BSQ44_RS16010	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BSQ44_RS16025	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_RS16050	COG0702	epimerase
BSQ44_RS16090	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BSQ44_RS16105	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BSQ44_RS16110	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_RS16115	COG0203	ribosomal protein L17
BSQ44_RS16120	COG0202	RNA polymerase activity
BSQ44_RS16125	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BSQ44_RS16130	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BSQ44_RS16135	COG0563	adenylate kinase activity
BSQ44_RS16145	COG0200	Binds to the 23S rRNA
BSQ44_RS16150	COG1841	ribosomal large subunit assembly
BSQ44_RS16155	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BSQ44_RS16160	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BSQ44_RS16165	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BSQ44_RS16170	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BSQ44_RS16175	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BSQ44_RS16180	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BSQ44_RS16185	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BSQ44_RS16190	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BSQ44_RS16195	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BSQ44_RS16200	COG0255	Belongs to the universal ribosomal protein uL29 family
BSQ44_RS16205	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BSQ44_RS16210	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BSQ44_RS16215	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BSQ44_RS16220	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BSQ44_RS16225	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BSQ44_RS16230	COG0089	rRNA binding
BSQ44_RS16235	COG0088	Forms part of the polypeptide exit tunnel
BSQ44_RS16240	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BSQ44_RS16245	COG0051	transcription antitermination factor activity, RNA binding
BSQ44_RS16250	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ44_RS16255	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ44_RS16260	COG0049	tRNA binding
BSQ44_RS16265	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BSQ44_RS16275	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BSQ44_RS16280	COG0085	RNA polymerase activity
BSQ44_RS16285	COG0222	ribosome binding
BSQ44_RS16290	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BSQ44_RS16295	COG0081	regulation of translation
BSQ44_RS16300	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BSQ44_RS16310	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BSQ44_RS16340	COG1999	signal sequence binding
BSQ44_RS16350	COG2264	protein methyltransferase activity
BSQ44_RS16360	COG0006	proline dipeptidase activity
BSQ44_RS16360	COG0006	proline dipeptidase activity
BSQ44_RS16375	COG0497	DNA recombination
BSQ44_RS16380	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_RS16390	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BSQ44_RS16395	COG0849	cell division
BSQ44_RS16400	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BSQ44_RS16405	COG1181	Belongs to the D-alanine--D-alanine ligase family
BSQ44_RS16410	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BSQ44_RS16415	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BSQ44_RS16420	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BSQ44_RS16430	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BSQ44_RS16435	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BSQ44_RS16445	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BSQ44_RS16460	COG0275	rRNA processing
BSQ44_RS16465	COG2001	Belongs to the MraZ family
BSQ44_RS16470	COG0626	cystathionine gamma-synthase activity
BSQ44_RS16495	COG3023	N-Acetylmuramoyl-L-alanine amidase
BSQ44_RS16500	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BSQ44_RS16525	COG3769	mannosylglycerate metabolic process
BSQ44_RS16540	COG0366	Alpha amylase catalytic
BSQ44_RS16580	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ44_RS16585	COG2226	methyltransferase
BSQ44_RS16590	COG1720	tRNA m6t6A37 methyltransferase activity
BSQ44_RS16615	COG4106	trans-aconitate 2-methyltransferase activity
BSQ44_RS16640	COG0513	Belongs to the DEAD box helicase family
BSQ44_RS16645	COG4221	oxidoreductase activity
BSQ44_RS16655	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS16685	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS16690	COG0028	Belongs to the TPP enzyme family
BSQ44_RS16715	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BSQ44_RS16720	COG2151	metal-sulfur cluster biosynthetic enzyme
BSQ44_RS16725	COG3396	Phenylacetate-CoA oxygenase
BSQ44_RS16730	COG3460	Phenylacetate-CoA oxygenase
BSQ44_RS16750	COG3396	Phenylacetate-CoA oxygenase
BSQ44_RS16770	COG1309	transcriptional regulator
BSQ44_RS16775	COG3046	protein related to deoxyribodipyrimidine photolyase
BSQ44_RS16795	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BSQ44_RS16805	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BSQ44_RS16810	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BSQ44_RS16835	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BSQ44_RS16840	COG0248	Ppx GppA phosphatase
BSQ44_RS16845	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BSQ44_RS16855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_RS16865	COG1126	abc transporter atp-binding protein
BSQ44_RS16870	COG0765	amino acid transport
BSQ44_RS16875	COG4597	amino acid ABC transporter
BSQ44_RS16880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS16885	COG0626	cystathionine gamma-synthase activity
BSQ44_RS16900	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS16905	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS16915	COG3842	ATPase activity
BSQ44_RS16925	COG0514	ATP-dependent DNA helicase (RecQ)
BSQ44_RS16930	COG1802	Transcriptional regulator
BSQ44_RS16995	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BSQ44_RS17010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_RS17040	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_RS17095	COG2968	Membrane
BSQ44_RS17105	COG2983	Belongs to the UPF0260 family
BSQ44_RS17125	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ44_RS17205	COG3347	Dehydrogenase
BSQ44_RS17205	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS17210	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
BSQ44_RS17215	COG4423	Transcription factor
BSQ44_RS17225	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS17230	COG1129	ABC transporter
BSQ44_RS17240	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BSQ44_RS17260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_RS17265	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BSQ44_RS17270	COG0271	Belongs to the BolA IbaG family
BSQ44_RS17280	COG2814	Major facilitator Superfamily
BSQ44_RS17285	COG0037	tRNA processing
BSQ44_RS17290	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BSQ44_RS17305	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BSQ44_RS17310	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BSQ44_RS17320	COG0596	Alpha beta hydrolase
BSQ44_RS17330	COG0538	isocitrate dehydrogenase activity
BSQ44_RS17345	COG2453	phosphatase
BSQ44_RS17345	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_RS17350	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BSQ44_RS17355	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BSQ44_RS17365	COG2313	pseudouridylate synthase activity
BSQ44_RS17370	COG0673	inositol 2-dehydrogenase activity
BSQ44_RS17390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_RS17395	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_RS17405	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ44_RS17415	COG1560	Kdo2-lipid A biosynthetic process
BSQ44_RS17425	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_RS17460	COG3302	dmso reductase anchor subunit
BSQ44_RS17465	COG0437	4 iron, 4 sulfur cluster binding
BSQ44_RS17470	COG0243	molybdopterin cofactor binding
BSQ44_RS17475	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BSQ44_RS17500	COG0776	regulation of translation
BSQ44_RS17505	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BSQ44_RS17510	COG0416	fatty acid biosynthetic process
BSQ44_RS17525	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_RS17540	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BSQ44_RS17565	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
BSQ44_RS17570	COG2814	Major facilitator Superfamily
BSQ44_RS17575	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BSQ44_RS17580	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BSQ44_RS17590	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ44_RS17590	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ44_RS17595	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BSQ44_RS17620	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BSQ44_RS17625	COG2989	Protein conserved in bacteria
BSQ44_RS17640	COG1024	Enoyl-CoA hydratase
BSQ44_RS17645	COG0113	porphobilinogen synthase activity
BSQ44_RS17680	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BSQ44_RS17690	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_RS17700	COG3327	negative regulation of DNA-templated transcription, initiation
BSQ44_RS17715	COG2050	protein possibly involved in aromatic compounds catabolism
BSQ44_RS17720	COG2124	cytochrome p450
BSQ44_RS17725	COG2030	dehydratase
BSQ44_RS17725	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS17735	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BSQ44_RS17740	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_RS17755	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_RS17760	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_RS17775	COG3239	Fatty acid desaturase
BSQ44_RS17780	COG1278	Cold shock
BSQ44_RS17800	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS17805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS17825	COG1280	lysine exporter protein (LysE YggA)
BSQ44_RS17840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_RS17845	COG1309	transcriptional regulator
BSQ44_RS17850	COG2200	EAL domain
BSQ44_RS17850	COG2199	diguanylate cyclase activity
BSQ44_RS17875	COG0493	'glutamate synthase
BSQ44_RS17895	COG5598	trimethylamine methyltransferase
BSQ44_RS17910	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS17925	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS17940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS17945	COG0601	transmembrane transport
BSQ44_RS17950	COG0747	negative chemotaxis
BSQ44_RS17985	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_RS17990	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_RS18000	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ44_RS18005	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ44_RS18010	COG2373	Large extracellular alpha-helical protein
BSQ44_RS18015	COG4953	penicillin-binding protein 1C
BSQ44_RS18025	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BSQ44_RS18055	COG2267	carboxylic ester hydrolase activity
BSQ44_RS18060	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_RS18070	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS18075	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_RS18080	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS18090	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_RS18095	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BSQ44_RS18100	COG0583	DNA-binding transcription factor activity
BSQ44_RS18105	COG0492	ferredoxin-NADP+ reductase activity
BSQ44_RS18110	COG1522	sequence-specific DNA binding
BSQ44_RS18115	COG2264	protein methyltransferase activity
BSQ44_RS18120	COG0463	Glycosyl transferase, family 2
BSQ44_RS18125	COG0438	transferase activity, transferring glycosyl groups
BSQ44_RS18130	COG0438	transferase activity, transferring glycosyl groups
BSQ44_RS18135	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_RS18190	COG1607	acyl-coa hydrolase
BSQ44_RS18195	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_RS18200	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_RS18215	COG0596	Alpha beta hydrolase
BSQ44_RS18230	COG3920	Histidine kinase
BSQ44_RS18230	COG2202	Pas domain
BSQ44_RS18235	COG0277	FAD linked oxidase domain protein
BSQ44_RS18245	COG0556	nucleotide-excision repair
BSQ44_RS18250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_RS18275	COG1278	Cold shock
BSQ44_RS18280	COG1278	Cold shock
BSQ44_RS18290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ44_RS18295	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_RS18300	COG1846	Transcriptional regulator
BSQ44_RS18305	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS18325	COG0367	asparagine synthase
BSQ44_RS18335	COG0589	response to stress
BSQ44_RS18340	COG0659	secondary active sulfate transmembrane transporter activity
BSQ44_RS18345	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ44_RS18360	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BSQ44_RS18370	COG1496	oxidoreductase activity
BSQ44_RS18385	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BSQ44_RS18410	COG0583	DNA-binding transcription factor activity
BSQ44_RS18425	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BSQ44_RS18430	COG0193	aminoacyl-tRNA hydrolase activity
BSQ44_RS18455	COG0012	GTP binding
BSQ44_RS18545	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_RS18550	COG3608	succinylglutamate desuccinylase aspartoacylase
BSQ44_RS18555	COG2207	Transcriptional regulator
BSQ44_RS18555	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_RS18560	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_RS18600	COG4209	transmembrane transport
BSQ44_RS18610	COG2390	Transcriptional regulator
BSQ44_RS18615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_RS18620	COG0596	Alpha beta hydrolase
BSQ44_RS18655	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BSQ44_RS18660	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BSQ44_RS18665	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BSQ44_RS18665	COG2857	Cytochrome c1
BSQ44_RS18700	COG1132	(ABC) transporter
BSQ44_RS18705	COG1132	(ABC) transporter
BSQ44_RS18710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BSQ44_RS18720	COG0408	coproporphyrinogen oxidase activity
BSQ44_RS18730	COG0617	tRNA 3'-terminal CCA addition
BSQ44_RS18745	COG0714	Associated with various cellular activities
BSQ44_RS18770	COG0435	Glutathione S-transferase
BSQ44_RS18795	COG2267	carboxylic ester hydrolase activity
BSQ44_RS18800	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_RS18810	COG0596	Alpha beta hydrolase
BSQ44_RS18815	COG1024	Enoyl-CoA hydratase
BSQ44_RS18815	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_RS18820	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS18825	COG0183	Belongs to the thiolase family
BSQ44_RS18830	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS18835	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS18840	COG2116	formate transmembrane transporter activity
BSQ44_RS18890	COG1522	sequence-specific DNA binding
BSQ44_RS18930	COG1063	alcohol dehydrogenase
BSQ44_RS18945	COG3706	GGDEF domain
BSQ44_RS18955	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS18960	COG5001	Diguanylate cyclase
BSQ44_RS18960	COG3300	MHYT domain
BSQ44_RS18965	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BSQ44_RS18980	COG1663	tetraacyldisaccharide 4'-kinase activity
BSQ44_RS18985	COG1519	Transferase
BSQ44_RS19005	COG0312	modulator of DNA gyrase
BSQ44_RS19010	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_RS19010	COG0475	glutathione-regulated potassium exporter activity
BSQ44_RS19025	COG0612	Peptidase, M16
BSQ44_RS19030	COG0612	Peptidase, M16
BSQ44_RS19035	COG0742	ribosomal rna small subunit methyltransferase
BSQ44_RS19040	COG1187	pseudouridine synthase activity
BSQ44_RS19045	COG0590	tRNA wobble adenosine to inosine editing
BSQ44_RS19055	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BSQ44_RS19065	COG0196	riboflavin kinase activity
BSQ44_RS19090	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_RS19095	COG0459	protein refolding
BSQ44_RS19105	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_RS19110	COG0730	response to heat
BSQ44_RS19115	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS19120	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_RS19120	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS19125	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS19130	COG1253	flavin adenine dinucleotide binding
BSQ44_RS19135	COG0114	fumarate hydratase activity
BSQ44_RS19145	COG2259	Doxx family
BSQ44_RS19150	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BSQ44_RS19155	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BSQ44_RS19160	COG0124	histidyl-tRNA synthetase
BSQ44_RS19175	COG2818	Glycosylase
BSQ44_RS19180	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS19195	COG0247	lactate metabolic process
BSQ44_RS19215	COG0277	FAD linked oxidase domain protein
BSQ44_RS19230	COG0277	FAD linked oxidase domain protein
BSQ44_RS19235	COG2186	Transcriptional regulator
BSQ44_RS19240	COG0247	lactate metabolic process
BSQ44_RS19275	COG3706	GGDEF domain
BSQ44_RS19285	COG0443	Heat shock 70 kDa protein
BSQ44_RS19315	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_RS19365	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_RS19370	COG0583	DNA-binding transcription factor activity
BSQ44_RS19385	COG5490	Phasin protein
BSQ44_RS19390	COG2205	protein histidine kinase activity
BSQ44_RS19395	COG1840	ABC-type Fe3 transport system, periplasmic component
BSQ44_RS19400	COG1178	ABC-type Fe3 transport system permease component
BSQ44_RS19405	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_RS19420	COG1177	transmembrane transport
BSQ44_RS19425	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS19430	COG3842	ATPase activity
BSQ44_RS19440	COG0174	glutamine synthetase
BSQ44_RS19450	COG1254	Belongs to the acylphosphatase family
BSQ44_RS19455	COG0604	alcohol dehydrogenase
BSQ44_RS19465	COG3800	Transcriptional regulator
BSQ44_RS19465	COG1396	sequence-specific DNA binding
BSQ44_RS19470	COG2224	Isocitrate lyase
BSQ44_RS19485	COG0174	glutamine synthetase
BSQ44_RS19490	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_RS19500	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS19515	COG0471	metal ion transport
BSQ44_RS19515	COG3273	potassium ion transport
BSQ44_RS19535	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS19540	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BSQ44_RS19545	COG0363	glucosamine-6-phosphate deaminase activity
BSQ44_RS19550	COG0129	dihydroxy-acid dehydratase activity
BSQ44_RS19605	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BSQ44_RS19620	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_RS19625	COG3180	Ammonia monooxygenase
BSQ44_RS19635	COG0123	including yeast histone deacetylase and acetoin utilization protein
BSQ44_RS19640	COG0534	Mate efflux family protein
BSQ44_RS19645	COG0167	dihydroorotate dehydrogenase activity
BSQ44_RS19670	COG0784	Response regulator, receiver
BSQ44_RS19670	COG2198	Histidine kinase
BSQ44_RS19670	COG2205	protein histidine kinase activity
BSQ44_RS19675	COG1970	mechanosensitive ion channel activity
BSQ44_RS19680	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BSQ44_RS19680	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_RS19690	COG2133	pyrroloquinoline quinone binding
BSQ44_RS19695	COG0583	DNA-binding transcription factor activity
BSQ44_RS19700	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BSQ44_RS19705	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BSQ44_RS19715	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BSQ44_RS19730	COG0424	maF-like protein
BSQ44_RS19735	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BSQ44_RS19745	COG5328	Belongs to the UPF0262 family
BSQ44_RS19750	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BSQ44_RS19760	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BSQ44_RS19785	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BSQ44_RS19790	COG2943	transferase activity, transferring hexosyl groups
BSQ44_RS19820	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_RS19830	COG0436	Aminotransferase
BSQ44_RS19840	COG0477	Major facilitator Superfamily
BSQ44_RS19845	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BSQ44_RS19875	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BSQ44_RS19880	COG3246	L-lysine catabolic process to acetate
BSQ44_RS19920	COG2188	Transcriptional regulator
BSQ44_RS19925	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_RS19930	COG3845	ABC transporter
BSQ44_RS19935	COG4603	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS19940	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS19960	COG4821	SIS domain
BSQ44_RS20030	COG5001	Diguanylate cyclase
BSQ44_RS20035	COG5001	Diguanylate cyclase
BSQ44_RS20035	COG5002	protein histidine kinase activity
BSQ44_RS20085	COG4608	Belongs to the ABC transporter superfamily
BSQ44_RS20100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS20115	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BSQ44_RS20125	COG0277	FAD linked oxidase domain protein
BSQ44_RS20155	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BSQ44_RS20200	COG0717	Belongs to the dCTP deaminase family
BSQ44_RS20215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BSQ44_RS20220	COG2967	ApaG domain
BSQ44_RS20230	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BSQ44_RS20235	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BSQ44_RS20245	COG0704	Plays a role in the regulation of phosphate uptake
BSQ44_RS20250	COG5002	protein histidine kinase activity
BSQ44_RS20255	COG2326	polyphosphate kinase activity
BSQ44_RS20300	COG1024	Enoyl-CoA hydratase
BSQ44_RS20310	COG2197	response regulator
BSQ44_RS20315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_RS20325	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
BSQ44_RS20350	COG1024	Enoyl-CoA hydratase
BSQ44_RS20350	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_RS20355	COG2200	EAL domain
BSQ44_RS20355	COG2199	diguanylate cyclase activity
BSQ44_RS20360	COG0183	Belongs to the thiolase family
BSQ44_RS20375	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS20390	COG0730	response to heat
BSQ44_RS20410	COG1201	RNA secondary structure unwinding
BSQ44_RS20485	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BSQ44_RS20540	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS20545	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS20545	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_RS20555	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_RS20565	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_RS20570	COG0583	DNA-binding transcription factor activity
BSQ44_RS20575	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS20590	COG3246	L-lysine catabolic process to acetate
BSQ44_RS20630	COG0145	ligase activity
BSQ44_RS20640	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS20705	COG1793	dna ligase
BSQ44_RS20720	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BSQ44_RS20725	COG4608	Belongs to the ABC transporter superfamily
BSQ44_RS20730	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS20740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS20745	COG0601	transmembrane transport
BSQ44_RS20750	COG0747	negative chemotaxis
BSQ44_RS20760	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS20770	COG0546	phosphoglycolate phosphatase activity
BSQ44_RS20780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_RS20790	COG0840	transmembrane signaling receptor activity
BSQ44_RS20805	COG0129	dihydroxy-acid dehydratase activity
BSQ44_RS20815	COG1024	Enoyl-CoA hydratase
BSQ44_RS20835	COG0489	protein tyrosine kinase activity
BSQ44_RS20855	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS20860	COG1177	transmembrane transport
BSQ44_RS20865	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS20870	COG3842	ATPase activity
BSQ44_RS20875	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BSQ44_RS20885	COG0583	DNA-binding transcription factor activity
BSQ44_RS20900	COG2358	TRAP transporter, solute receptor (TAXI family
BSQ44_RS20915	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS20920	COG2201	protein-glutamate methylesterase activity
BSQ44_RS20925	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BSQ44_RS20930	COG0835	chemotaxis
BSQ44_RS20935	COG0643	Histidine kinase
BSQ44_RS20935	COG2198	Histidine kinase
BSQ44_RS20940	COG0784	Response regulator, receiver
BSQ44_RS20940	COG2198	Histidine kinase
BSQ44_RS20940	COG0643	Histidine kinase
BSQ44_RS20950	COG0840	transmembrane signaling receptor activity
BSQ44_RS20955	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_RS20965	COG0842	Transport permease protein
BSQ44_RS20970	COG1131	(ABC) transporter
BSQ44_RS20975	COG2226	methyltransferase
BSQ44_RS21005	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BSQ44_RS21030	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BSQ44_RS21060	COG0601	transmembrane transport
BSQ44_RS21065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS21070	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS21105	COG0438	transferase activity, transferring glycosyl groups
BSQ44_RS21115	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS21130	COG4172	Belongs to the ABC transporter superfamily
BSQ44_RS21140	COG0668	transmembrane transport
BSQ44_RS21150	COG2192	nodulation
BSQ44_RS21175	COG0673	inositol 2-dehydrogenase activity
BSQ44_RS21185	COG3842	ATPase activity
BSQ44_RS21190	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS21195	COG1175	transmembrane transport
BSQ44_RS21200	COG1653	transport
BSQ44_RS21210	COG2771	luxR family
BSQ44_RS21225	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BSQ44_RS21230	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BSQ44_RS21235	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BSQ44_RS21245	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BSQ44_RS21255	COG4786	Flagellar basal body rod
BSQ44_RS21260	COG1157	protein secretion by the type III secretion system
BSQ44_RS21270	COG1815	bacterial-type flagellum-dependent cell motility
BSQ44_RS21275	COG1558	bacterial-type flagellum-dependent cell motility
BSQ44_RS21280	COG1677	Flagellar hook-basal body complex protein FliE
BSQ44_RS21285	COG4786	Flagellar basal body rod
BSQ44_RS21290	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
BSQ44_RS21295	COG1706	bacterial-type flagellum-dependent cell motility
BSQ44_RS21305	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BSQ44_RS21315	COG1338	Plays a role in the flagellum-specific transport system
BSQ44_RS21320	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_RS21325	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_RS21330	COG1766	The M ring may be actively involved in energy transduction
BSQ44_RS21340	COG1360	Flagellar Motor Protein
BSQ44_RS21380	COG5442	Flagellar protein FlaF
BSQ44_RS21385	COG5443	negative regulation of bacterial-type flagellum assembly
BSQ44_RS21390	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BSQ44_RS21395	COG1987	bacterial-type flagellum assembly
BSQ44_RS21400	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BSQ44_RS21430	COG1024	Enoyl-CoA hydratase
BSQ44_RS21465	COG1022	Amp-dependent synthetase and ligase
BSQ44_RS21465	COG3320	Male sterility
BSQ44_RS21495	COG0753	catalase activity
BSQ44_RS21500	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS21535	COG4453	Protein conserved in bacteria
BSQ44_RS21540	COG3153	acetyltransferase
BSQ44_RS21545	COG0154	amidase activity
BSQ44_RS21560	COG0583	DNA-binding transcription factor activity
BSQ44_RS21585	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_RS21595	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS21600	COG1230	cation diffusion facilitator family transporter
BSQ44_RS21625	COG3273	potassium ion transport
BSQ44_RS21625	COG0471	metal ion transport
BSQ44_RS21630	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS21660	COG1054	Belongs to the UPF0176 family
BSQ44_RS21670	COG0800	Aldolase
BSQ44_RS21680	COG2204	response regulator
BSQ44_RS21710	COG0129	dihydroxy-acid dehydratase activity
BSQ44_RS21715	COG5310	Homospermidine synthase
BSQ44_RS21725	COG2738	Putative neutral zinc metallopeptidase
BSQ44_RS21735	COG0737	Belongs to the 5'-nucleotidase family
BSQ44_RS21745	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BSQ44_RS21765	COG0330	HflC and HflK could
BSQ44_RS21785	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BSQ44_RS21790	COG2951	lytic endotransglycosylase activity
BSQ44_RS21820	COG0067	glutamate synthase
BSQ44_RS21820	COG0069	glutamate synthase activity
BSQ44_RS21820	COG0070	glutamate synthase
BSQ44_RS21835	COG3220	belongs to the UPF0276 family
BSQ44_RS21850	COG0071	Belongs to the small heat shock protein (HSP20) family
BSQ44_RS21905	COG4608	Belongs to the ABC transporter superfamily
BSQ44_RS21910	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS21920	COG1609	Transcriptional regulator
BSQ44_RS21930	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_RS21945	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_RS21950	COG1024	Enoyl-CoA hydratase
BSQ44_RS21955	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_RS21965	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS21995	COG1024	Enoyl-CoA hydratase
BSQ44_RS22000	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS22005	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS22030	COG2358	TRAP transporter, solute receptor (TAXI family
BSQ44_RS22045	COG0747	negative chemotaxis
BSQ44_RS22050	COG0601	transmembrane transport
BSQ44_RS22055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS22085	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_RS22090	COG1473	amidohydrolase
BSQ44_RS22100	COG0154	amidase activity
BSQ44_RS22105	COG0583	DNA-binding transcription factor activity
BSQ44_RS22110	COG0546	phosphoglycolate phosphatase activity
BSQ44_RS22120	COG3842	ATPase activity
BSQ44_RS22130	COG4208	sulfate ABC transporter
BSQ44_RS22170	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS22185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ44_RS22190	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ44_RS22195	COG0488	(ABC) transporter
BSQ44_RS22205	COG1022	Amp-dependent synthetase and ligase
BSQ44_RS22225	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS22235	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS22235	COG0604	alcohol dehydrogenase
BSQ44_RS22235	COG3321	synthase
BSQ44_RS22240	COG1960	acyl-CoA dehydrogenase activity
BSQ44_RS22265	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS22275	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_RS22275	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS22290	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_RS22305	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BSQ44_RS22375	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS22390	COG5001	Diguanylate cyclase
BSQ44_RS22415	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS22420	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS22425	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BSQ44_RS22435	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ44_RS22460	COG0523	cobalamin synthesis protein
BSQ44_RS22480	COG1573	uracil-dna glycosylase
BSQ44_RS22490	COG3622	Belongs to the hyi family
BSQ44_RS22495	COG4702	Belongs to the UPF0303 family
BSQ44_RS22500	COG2258	MOSC domain
BSQ44_RS22505	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_RS22515	COG0583	DNA-binding transcription factor activity
BSQ44_RS22535	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_RS22545	COG2351	hydroxyisourate hydrolase activity
BSQ44_RS22550	COG3648	Uricase
BSQ44_RS22550	COG3195	allantoin biosynthetic process
BSQ44_RS22555	COG3257	ureidoglycine aminohydrolase activity
BSQ44_RS22560	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
BSQ44_RS22575	COG2944	sequence-specific DNA binding
BSQ44_RS22595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS22605	COG3609	addiction module antidote protein, CC2985 family
BSQ44_RS22615	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BSQ44_RS22660	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_RS22670	COG3246	L-lysine catabolic process to acetate
BSQ44_RS22675	COG4977	sequence-specific DNA binding
BSQ44_RS22680	COG4456	Virulence-associated protein
BSQ44_RS22690	COG0456	acetyltransferase
BSQ44_RS22695	COG1902	pentaerythritol trinitrate reductase activity
BSQ44_RS22705	COG0183	Belongs to the thiolase family
BSQ44_RS22710	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BSQ44_RS22720	COG1414	Transcriptional regulator
BSQ44_RS22730	COG3842	ATPase activity
BSQ44_RS22735	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS22740	COG1175	transmembrane transport
BSQ44_RS22750	COG0246	Mannitol dehydrogenase
BSQ44_RS22760	COG1312	Catalyzes the dehydration of D-mannonate
BSQ44_RS22770	COG2115	Belongs to the xylose isomerase family
BSQ44_RS22775	COG1070	Carbohydrate kinase
BSQ44_RS22785	COG1280	lysine exporter protein (LysE YggA)
BSQ44_RS22790	COG0596	Alpha beta hydrolase
BSQ44_RS22810	COG0642	Histidine kinase
BSQ44_RS22845	COG0739	heme binding
BSQ44_RS22850	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS22880	COG0697	spore germination
BSQ44_RS22885	COG0542	response to heat
BSQ44_RS22895	COG2890	protein-(glutamine-N5) methyltransferase activity
BSQ44_RS22900	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BSQ44_RS22920	COG0527	aspartate kinase activity
BSQ44_RS22935	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ44_RS22940	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
BSQ44_RS22960	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BSQ44_RS22975	COG2226	methyltransferase
BSQ44_RS22990	COG0494	nUDIX hydrolase
BSQ44_RS23000	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BSQ44_RS23005	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ44_RS23010	COG0653	protein targeting
BSQ44_RS23030	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_RS23040	COG1238	metal cluster binding
BSQ44_RS23060	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ44_RS23070	COG0697	spore germination
BSQ44_RS23080	COG0300	oxidoreductase activity
BSQ44_RS23110	COG2086	electron transfer activity
BSQ44_RS23115	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BSQ44_RS23120	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_RS23130	COG4251	negative regulation of phosphorylation
BSQ44_RS23130	COG3706	GGDEF domain
BSQ44_RS23130	COG2203	Gaf domain
BSQ44_RS23130	COG5001	Diguanylate cyclase
BSQ44_RS23155	COG2884	Cell division ATP-binding protein ftsE
BSQ44_RS23195	COG0287	Prephenate dehydrogenase
BSQ44_RS23200	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ44_RS23205	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BSQ44_RS23220	COG2226	methyltransferase
BSQ44_RS23225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ44_RS23250	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BSQ44_RS23315	COG4536	flavin adenine dinucleotide binding
BSQ44_RS23320	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BSQ44_RS23325	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BSQ44_RS23340	COG0825	malonyl-CoA metabolic process
BSQ44_RS23345	COG3034	peptidoglycan biosynthetic process
BSQ44_RS23350	COG0425	Belongs to the sulfur carrier protein TusA family
BSQ44_RS23350	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BSQ44_RS23355	COG0523	cobalamin synthesis protein
BSQ44_RS23360	COG1686	Belongs to the peptidase S11 family
BSQ44_RS23365	COG1473	amidohydrolase
BSQ44_RS23385	COG0747	negative chemotaxis
BSQ44_RS23390	COG0601	transmembrane transport
BSQ44_RS23395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_RS23415	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_RS23425	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_RS23435	COG3845	ABC transporter
BSQ44_RS23440	COG1335	isochorismatase
BSQ44_RS23455	COG3842	ATPase activity
BSQ44_RS23460	COG1177	transmembrane transport
BSQ44_RS23465	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_RS23480	COG0372	Belongs to the citrate synthase family
BSQ44_RS23485	COG0372	Belongs to the citrate synthase family
BSQ44_RS23505	COG2203	Gaf domain
BSQ44_RS23505	COG2199	diguanylate cyclase activity
BSQ44_RS23505	COG2200	EAL domain
BSQ44_RS23530	COG0798	PFAM Bile acid sodium symporter
BSQ44_RS23560	COG1042	CoA-binding domain protein
BSQ44_RS23560	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ44_RS23560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_RS23570	COG2217	Heavy metal translocating P-type atpase
BSQ44_RS23580	COG3118	belongs to the thioredoxin family
BSQ44_RS23620	COG1653	transport
BSQ44_RS23625	COG1175	transmembrane transport
BSQ44_RS23630	COG0395	ABC-type sugar transport system, permease component
BSQ44_RS23635	COG3842	ATPase activity
BSQ44_RS23645	COG1309	transcriptional regulator
BSQ44_RS23650	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_RS23660	COG1233	COG1233 Phytoene dehydrogenase and related
BSQ44_RS23665	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_RS23695	COG0346	lactoylglutathione lyase activity
BSQ44_RS23705	COG1597	lipid kinase activity
BSQ44_RS23725	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
BSQ44_RS23730	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_RS23750	COG0784	Response regulator, receiver
BSQ44_RS23755	COG3920	Histidine kinase
BSQ44_RS23755	COG2202	Pas domain
BSQ44_RS23770	COG1129	ABC transporter
BSQ44_RS23775	COG4214	carbohydrate transport
BSQ44_RS23780	COG4213	ABC transporter substrate-binding protein
BSQ44_RS23805	COG0745	RESPONSE REGULATOR receiver
BSQ44_RS23810	COG0704	Plays a role in the regulation of phosphate uptake
BSQ44_RS23815	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BSQ44_RS23825	COG0573	inorganic phosphate transmembrane transporter activity
BSQ44_RS23835	COG2205	protein histidine kinase activity
BSQ44_RS23835	COG3437	response regulator, receiver
BSQ44_RS23835	COG3850	Histidine kinase
BSQ44_RS23835	COG4999	Histidine kinase
BSQ44_RS23840	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_RS23850	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BSQ44_RS23865	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BSQ44_RS23890	COG2902	Dehydrogenase
BSQ44_RS23900	COG0138	bifunctional purine biosynthesis protein purh
BSQ44_RS23915	COG0501	Belongs to the peptidase M48B family
BSQ44_RS23945	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_RS23950	COG5425	PFAM Usg family protein
BSQ44_RS23965	COG1692	metallophosphoesterase
BSQ44_RS23970	COG1253	flavin adenine dinucleotide binding
BSQ44_RS24120	COG4974	Belongs to the 'phage' integrase family
BSQ44_RS24125	COG2885	chlorophyll binding
BSQ44_RS24410	COG0175	sulfate reduction
BSQ44_RS24415	COG3002	Belongs to the UPF0753 family
BSQ44_RS24420	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ44_RS24425	COG0583	DNA-binding transcription factor activity
BSQ44_RS24465	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_RS24525	COG0596	Alpha beta hydrolase
BSQ44_RS24565	COG4191	Histidine kinase
BSQ44_RS24565	COG0784	Response regulator, receiver
BSQ44_RS24600	COG1309	transcriptional regulator
BSQ44_RS24605	COG0586	Pfam SNARE associated Golgi protein
BSQ44_RS24620	COG3920	Histidine kinase
BSQ44_RS24660	COG3181	Tripartite tricarboxylate transporter family receptor
BSQ44_RS24665	COG2175	clavaminate synthase activity
BSQ44_RS24670	COG0583	DNA-binding transcription factor activity
BSQ44_RS24675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BSQ44_RS24685	COG0583	DNA-binding transcription factor activity
BSQ44_RS24690	COG1053	succinate dehydrogenase
BSQ44_RS24710	COG0473	3-isopropylmalate dehydrogenase activity
BSQ44_RS24710	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_RS24720	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BSQ44_RS24735	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_RS24750	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS24760	COG0583	DNA-binding transcription factor activity
BSQ44_RS24765	COG1053	succinate dehydrogenase
BSQ44_RS24770	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS24790	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_RS24795	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_RS24800	COG2072	flavoprotein involved in K transport
BSQ44_RS24805	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS24810	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS24815	COG0657	acetylesterase activity
BSQ44_RS24820	COG2072	flavoprotein involved in K transport
BSQ44_RS24835	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS24845	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS24850	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS24865	COG1047	Peptidyl-prolyl cis-trans
BSQ44_RS24885	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BSQ44_RS24890	COG0037	tRNA processing
BSQ44_RS24900	COG2885	chlorophyll binding
BSQ44_RS24915	COG0848	biopolymer transport protein
BSQ44_RS24925	COG0824	Thioesterase
BSQ44_RS24940	COG2255	four-way junction helicase activity
BSQ44_RS24945	COG0632	four-way junction helicase activity
BSQ44_RS24960	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BSQ44_RS24980	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_RS25020	COG0483	inositol monophosphate 1-phosphatase activity
BSQ44_RS25025	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS25035	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ44_RS25050	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BSQ44_RS25065	COG0142	geranyltranstransferase activity
BSQ44_RS25070	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BSQ44_RS25075	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BSQ44_RS25085	COG0405	Gamma-glutamyltransferase
BSQ44_RS25100	COG0183	Belongs to the thiolase family
BSQ44_RS25105	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_RS25115	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BSQ44_RS25125	COG3339	Conserved Protein
BSQ44_RS25130	COG2154	pterin-4-alpha-carbinolamine dehydratase
BSQ44_RS25145	COG4181	ATPase activity
BSQ44_RS25155	COG0670	Belongs to the BI1 family
BSQ44_RS25185	COG0583	DNA-binding transcription factor activity
BSQ44_RS25200	COG0640	Transcriptional regulator
BSQ44_RS25205	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_RS25215	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_RS25225	COG1570	exodeoxyribonuclease VII activity
BSQ44_RS25235	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BSQ44_RS25245	COG4133	protoheme IX ABC transporter activity
BSQ44_RS25250	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BSQ44_RS25260	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BSQ44_RS25270	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_RS25275	COG2378	regulation of single-species biofilm formation
BSQ44_RS25290	COG2917	probably involved in intracellular septation
BSQ44_RS25295	COG0552	protein localization to endoplasmic reticulum
BSQ44_RS25320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BSQ44_RS25325	COG1388	LysM domain
BSQ44_RS25325	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_RS25355	COG0789	Transcriptional regulator
BSQ44_RS25360	COG1914	H( )-stimulated, divalent metal cation uptake system
BSQ44_RS25400	COG0330	HflC and HflK could
BSQ44_RS25410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ44_RS25415	COG2217	Heavy metal translocating P-type atpase
BSQ44_RS25425	COG1999	signal sequence binding
BSQ44_RS25445	COG1276	copper resistance
BSQ44_RS25470	COG1999	signal sequence binding
BSQ44_RS25525	COG4634	DNA integration
BSQ44_RS25665	COG3831	ATPase activity
BSQ44_RS25745	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BSQ44_RS25750	COG2948	multi-organism process
BSQ44_RS25755	COG3504	Conjugal transfer protein
BSQ44_RS25780	COG0741	lytic transglycosylase activity
BSQ44_RS25795	COG3838	Conjugal transfer protein Trbc
BSQ44_RS25835	COG2264	protein methyltransferase activity
BSQ44_RS25845	COG3852	Histidine kinase
BSQ44_RS25850	COG1192	Involved in chromosome partitioning
BSQ44_RS25860	COG0640	Transcriptional regulator
BSQ44_RS25890	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BSQ44_RS25905	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_RS25920	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_RS25950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_RS25970	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BSQ44_RS25970	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BSQ44_RS25975	COG0785	Cytochrome C biogenesis protein
BSQ44_RS26020	COG2010	Cytochrome c
BSQ44_RS26020	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_RS26085	COG0741	lytic transglycosylase activity
BSQ44_RS26085	COG1196	nuclear chromosome segregation
BSQ44_RS26085	COG0739	heme binding
BSQ44_RS26090	COG4957	zinc ion binding
BSQ44_RS26110	COG2963	transposase activity
BSQ44_RS26115	COG3436	PFAM IS66 Orf2 family protein
BSQ44_RS26120	COG4372	Transposase
BSQ44_RS26145	COG0785	Cytochrome C biogenesis protein
BSQ44_RS26185	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BSQ44_RS26190	COG0785	Cytochrome C biogenesis protein
BSQ44_RS26205	COG1971	Probably functions as a manganese efflux pump
BSQ44_RS26240	COG0784	Response regulator, receiver
BSQ44_RS26445	COG1396	sequence-specific DNA binding
BSQ44_RS26505	COG1024	Enoyl-CoA hydratase
BSQ44_RS26675	COG3920	Histidine kinase
BSQ44_RS26675	COG2202	Pas domain
BSQ44_RS27150	COG0628	permease
BSQ44_RS27260	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BSQ44_RS27280	COG1215	transferase activity, transferring glycosyl groups
BSQ44_RS27315	COG3335	DDE superfamily endonuclease
BSQ44_RS27325	COG3335	DDE superfamily endonuclease
BSQ44_RS27345	COG1335	isochorismatase
BSQ44_RS27390	COG0456	acetyltransferase
BSQ44_RS27390	COG0454	-acetyltransferase
BSQ44_RS27445	COG3437	response regulator, receiver
BSQ44_RS27445	COG0784	Response regulator, receiver
BSQ44_RS27580	COG0444	Belongs to the ABC transporter superfamily
BSQ44_RS27585	COG4608	Belongs to the ABC transporter superfamily
BSQ44_RS27600	COG3437	response regulator, receiver
BSQ44_RS27600	COG0784	Response regulator, receiver
BSQ44_RS27640	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ44_RS27715	COG0154	amidase activity
BSQ44_RS27730	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_RS27790	COG2963	transposase activity
BSQ44_RS27800	COG2197	response regulator