locus-tag class description AF_RS00010 PF00005 ABC transporter AF_RS00020 PF02607 B12 binding domain AF_RS00020 PF02310 B12 binding domain AF_RS00035 PF02007 Tetrahydromethanopterin S-methyltransferase MtrH subunit AF_RS00045 PF02607 B12 binding domain AF_RS00045 PF02310 B12 binding domain AF_RS00075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS00075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS00080 PF00108 Thiolase, N-terminal domain AF_RS00080 PF02803 Thiolase, C-terminal domain AF_RS00090 PF02515 CoA-transferase family III AF_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS00095 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AF_RS00095 PF17203 Single cache domain 3 AF_RS00095 PF00989 PAS fold AF_RS00105 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AF_RS00105 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AF_RS00110 PF00465 Iron-containing alcohol dehydrogenase AF_RS00125 PF08734 GYD domain AF_RS00150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF_RS00150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AF_RS00155 PF02803 Thiolase, C-terminal domain AF_RS00155 PF00108 Thiolase, N-terminal domain AF_RS00160 PF01238 Phosphomannose isomerase type I AF_RS00170 PF02654 Cobalamin-5-phosphate synthase AF_RS00175 PF00534 Glycosyl transferases group 1 AF_RS00175 PF13439 Glycosyltransferase Family 4 AF_RS00180 PF00535 Glycosyl transferase family 2 AF_RS00190 PF00005 ABC transporter AF_RS00200 PF00534 Glycosyl transferases group 1 AF_RS00240 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) AF_RS00245 PF01546 Peptidase family M20/M25/M40 AF_RS00245 PF07687 Peptidase dimerisation domain AF_RS00290 PF02223 Thymidylate kinase AF_RS00295 PF00571 CBS domain AF_RS00335 PF18395 Cas3 C-terminal domain AF_RS00335 PF18019 HD domain AF_RS00335 PF00270 DEAD/DEAH box helicase AF_RS00360 PF02237 Biotin protein ligase C terminal domain AF_RS00360 PF03099 Biotin/lipoate A/B protein ligase family AF_RS00360 PF08279 HTH domain AF_RS00370 PF12800 4Fe-4S binding domain AF_RS00370 PF13247 4Fe-4S dicluster domain AF_RS00390 PF00202 Aminotransferase class-III AF_RS00425 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS00430 PF00005 ABC transporter AF_RS00435 PF00005 ABC transporter AF_RS00440 PF13193 AMP-binding enzyme C-terminal domain AF_RS00440 PF00501 AMP-binding enzyme AF_RS00450 PF01557 Fumarylacetoacetate (FAA) hydrolase family AF_RS00455 PF00005 ABC transporter AF_RS00455 PF08402 TOBE domain AF_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AF_RS00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AF_RS00525 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AF_RS00525 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AF_RS00530 PF01791 DeoC/LacD family aldolase AF_RS00540 PF01409 tRNA synthetases class II core domain (F) AF_RS00540 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AF_RS00550 PF02146 Sir2 family AF_RS00565 PF00795 Carbon-nitrogen hydrolase AF_RS00635 PF04493 Endonuclease V AF_RS00640 PF00850 Histone deacetylase domain AF_RS00645 PF00881 Nitroreductase family AF_RS00690 PF01209 ubiE/COQ5 methyltransferase family AF_RS00760 PF03239 Iron permease FTR1 family AF_RS00770 PF04060 Putative Fe-S cluster AF_RS00775 PF13247 4Fe-4S dicluster domain AF_RS00785 PF00384 Molybdopterin oxidoreductase AF_RS00785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AF_RS00785 PF01568 Molydopterin dinucleotide binding domain AF_RS00795 PF00994 Probable molybdopterin binding domain AF_RS00795 PF03453 MoeA N-terminal region (domain I and II) AF_RS00795 PF03454 MoeA C-terminal region (domain IV) AF_RS00810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AF_RS00810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AF_RS00870 PF13247 4Fe-4S dicluster domain AF_RS00875 PF00384 Molybdopterin oxidoreductase AF_RS00875 PF01568 Molydopterin dinucleotide binding domain AF_RS00925 PF01592 NifU-like N terminal domain AF_RS00930 PF00266 Aminotransferase class-V AF_RS00940 PF01206 Sulfurtransferase TusA AF_RS00975 PF13193 AMP-binding enzyme C-terminal domain AF_RS00975 PF00501 AMP-binding enzyme AF_RS00980 PF13193 AMP-binding enzyme C-terminal domain AF_RS00980 PF00501 AMP-binding enzyme AF_RS00985 PF00171 Aldehyde dehydrogenase family AF_RS00985 PF01575 MaoC like domain AF_RS00990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS00990 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS00990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS00995 PF00501 AMP-binding enzyme AF_RS01040 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AF_RS01050 PF00571 CBS domain AF_RS01050 PF01769 Divalent cation transporter AF_RS01050 PF03448 MgtE intracellular N domain AF_RS01055 PF00815 Histidinol dehydrogenase AF_RS01080 PF02254 TrkA-N domain AF_RS01080 PF02080 TrkA-C domain AF_RS01080 PF00999 Sodium/hydrogen exchanger family AF_RS01090 PF08502 LeuA allosteric (dimerisation) domain AF_RS01090 PF00682 HMGL-like AF_RS01095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF_RS01095 PF02785 Biotin carboxylase C-terminal domain AF_RS01095 PF00289 Biotin carboxylase, N-terminal domain AF_RS01100 PF00005 ABC transporter AF_RS01105 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF_RS01105 PF00005 ABC transporter AF_RS01115 PF02653 Branched-chain amino acid transport system / permease component AF_RS01125 PF00881 Nitroreductase family AF_RS01130 PF00800 Prephenate dehydratase AF_RS01130 PF01842 ACT domain AF_RS01130 PF01817 Chorismate mutase type II AF_RS01135 PF01487 Type I 3-dehydroquinase AF_RS01140 PF01959 3-dehydroquinate synthase II AF_RS01145 PF01791 DeoC/LacD family aldolase AF_RS01150 PF00497 Bacterial extracellular solute-binding proteins, family 3 AF_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS01165 PF01435 Peptidase family M48 AF_RS01170 PF00474 Sodium:solute symporter family AF_RS01175 PF16198 tRNA pseudouridylate synthase B C-terminal domain AF_RS01175 PF01509 TruB family pseudouridylate synthase (N terminal domain) AF_RS01180 PF00156 Phosphoribosyl transferase domain AF_RS01185 PF01979 Amidohydrolase family AF_RS01185 PF13382 Adenine deaminase C-terminal domain AF_RS01190 PF01980 tRNA-methyltransferase O AF_RS01190 PF18389 TrmO C-terminal domain AF_RS01195 PF00483 Nucleotidyl transferase AF_RS01210 PF01325 Iron dependent repressor, N-terminal DNA binding domain AF_RS01210 PF02742 Iron dependent repressor, metal binding and dimerisation domain AF_RS01210 PF18357 Diphteria toxin repressor SH3 domain AF_RS01215 PF07670 Nucleoside recognition AF_RS01215 PF02421 Ferrous iron transport protein B AF_RS01215 PF17910 FeoB cytosolic helical domain AF_RS01215 PF07664 Ferrous iron transport protein B C terminus AF_RS01215 PF04023 FeoA domain AF_RS01225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AF_RS01225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS01245 PF03966 Trm112p-like protein AF_RS01250 PF00117 Glutamine amidotransferase class-I AF_RS01250 PF06418 CTP synthase N-terminus AF_RS01255 PF00958 GMP synthase C terminal domain AF_RS01255 PF00117 Glutamine amidotransferase class-I AF_RS01255 PF02540 NAD synthase AF_RS01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS01260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_RS01305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AF_RS01305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AF_RS01315 PF13193 AMP-binding enzyme C-terminal domain AF_RS01315 PF00501 AMP-binding enzyme AF_RS01325 PF01066 CDP-alcohol phosphatidyltransferase AF_RS01325 PF00483 Nucleotidyl transferase AF_RS01335 PF00994 Probable molybdopterin binding domain AF_RS01340 PF00892 EamA-like transporter family AF_RS01355 PF00578 AhpC/TSA family AF_RS01355 PF10417 C-terminal domain of 1-Cys peroxiredoxin AF_RS01370 PF17806 Sarcosine oxidase A3 domain AF_RS01370 PF01571 Aminomethyltransferase folate-binding domain AF_RS01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS01370 PF08669 Glycine cleavage T-protein C-terminal barrel domain AF_RS01385 PF01266 FAD dependent oxidoreductase AF_RS01395 PF02277 Phosphoribosyltransferase AF_RS01415 PF01938 TRAM domain AF_RS01415 PF05958 tRNA (Uracil-5-)-methyltransferase AF_RS01430 PF00108 Thiolase, N-terminal domain AF_RS01430 PF02803 Thiolase, C-terminal domain AF_RS01440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS01440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS01445 PF01012 Electron transfer flavoprotein domain AF_RS01450 PF01012 Electron transfer flavoprotein domain AF_RS01450 PF00766 Electron transfer flavoprotein FAD-binding domain AF_RS01465 PF00005 ABC transporter AF_RS01580 PF00535 Glycosyl transferase family 2 AF_RS01640 PF00535 Glycosyl transferase family 2 AF_RS01640 PF01501 Glycosyl transferase family 8 AF_RS01645 PF00535 Glycosyl transferase family 2 AF_RS01650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AF_RS01655 PF04321 RmlD substrate binding domain AF_RS01660 PF16363 GDP-mannose 4,6 dehydratase AF_RS01665 PF00483 Nucleotidyl transferase AF_RS01675 PF13439 Glycosyltransferase Family 4 AF_RS01675 PF00534 Glycosyl transferases group 1 AF_RS01680 PF00535 Glycosyl transferase family 2 AF_RS01700 PF02163 Peptidase family M50 AF_RS01700 PF00571 CBS domain AF_RS01705 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AF_RS01705 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AF_RS01730 PF00437 Type II/IV secretion system protein AF_RS01735 PF00465 Iron-containing alcohol dehydrogenase AF_RS01755 PF03358 NADPH-dependent FMN reductase AF_RS01760 PF01880 Desulfoferrodoxin AF_RS01770 PF00403 Heavy-metal-associated domain AF_RS01820 PF12838 4Fe-4S dicluster domain AF_RS01820 PF13187 4Fe-4S dicluster domain AF_RS01825 PF00294 pfkB family carbohydrate kinase AF_RS01835 PF17191 RecG wedge domain AF_RS01835 PF00271 Helicase conserved C-terminal domain AF_RS01835 PF00270 DEAD/DEAH box helicase AF_RS01850 PF01370 NAD dependent epimerase/dehydratase family AF_RS01865 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS01865 PF05362 Lon protease (S16) C-terminal proteolytic domain AF_RS01875 PF16177 Acetyl-coenzyme A synthetase N-terminus AF_RS01875 PF00501 AMP-binding enzyme AF_RS01875 PF13193 AMP-binding enzyme C-terminal domain AF_RS01880 PF07690 Major Facilitator Superfamily AF_RS01890 PF01008 Initiation factor 2 subunit family AF_RS01900 PF02634 FdhD/NarQ family AF_RS01910 PF13344 Haloacid dehalogenase-like hydrolase AF_RS01920 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit AF_RS01920 PF04060 Putative Fe-S cluster AF_RS01925 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit AF_RS01930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AF_RS01935 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain AF_RS01935 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit AF_RS01965 PF00156 Phosphoribosyl transferase domain AF_RS01975 PF04055 Radical SAM superfamily AF_RS01985 PF04055 Radical SAM superfamily AF_RS02000 PF00005 ABC transporter AF_RS02005 PF01565 FAD binding domain AF_RS02005 PF02913 FAD linked oxidases, C-terminal domain AF_RS02010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS02010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS02040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_RS02045 PF00294 pfkB family carbohydrate kinase AF_RS02045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AF_RS02050 PF01884 PcrB family AF_RS02070 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AF_RS02085 PF00155 Aminotransferase class I and II AF_RS02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS02090 PF00512 His Kinase A (phospho-acceptor) domain AF_RS02090 PF00989 PAS fold AF_RS02090 PF08447 PAS fold AF_RS02095 PF09190 DALR domain AF_RS02095 PF01406 tRNA synthetases class I (C) catalytic domain AF_RS02135 PF03437 BtpA family AF_RS02150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF_RS02150 PF10414 Sirohaem synthase dimerisation region AF_RS02155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AF_RS02155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AF_RS02160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AF_RS02160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AF_RS02175 PF09269 Domain of unknown function (DUF1967) AF_RS02175 PF01018 GTP1/OBG AF_RS02175 PF01926 50S ribosome-binding GTPase AF_RS02185 PF00005 ABC transporter AF_RS02190 PF01032 FecCD transport family AF_RS02205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS02205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS02210 PF00378 Enoyl-CoA hydratase/isomerase AF_RS02215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS02215 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS02215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS02225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF_RS02225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AF_RS02235 PF01242 6-pyruvoyl tetrahydropterin synthase AF_RS02240 PF04055 Radical SAM superfamily AF_RS02245 PF06508 Queuosine biosynthesis protein QueC AF_RS02255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AF_RS02270 PF13426 PAS domain AF_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS02270 PF13188 PAS domain AF_RS02270 PF00989 PAS fold AF_RS02270 PF00512 His Kinase A (phospho-acceptor) domain AF_RS02275 PF00072 Response regulator receiver domain AF_RS02280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AF_RS02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS02280 PF00989 PAS fold AF_RS02280 PF17203 Single cache domain 3 AF_RS02290 PF18073 Rubredoxin metal binding domain AF_RS02305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AF_RS02305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS02320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AF_RS02320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AF_RS02320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AF_RS02320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AF_RS02325 PF03176 MMPL family AF_RS02360 PF01494 FAD binding domain AF_RS02365 PF03989 DNA gyrase C-terminal domain, beta-propeller AF_RS02365 PF00521 DNA gyrase/topoisomerase IV, subunit A AF_RS02380 PF16868 NMT1-like family AF_RS02385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS02390 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AF_RS02390 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AF_RS02390 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AF_RS02410 PF00403 Heavy-metal-associated domain AF_RS02415 PF01037 Lrp/AsnC ligand binding domain AF_RS02420 PF01758 Sodium Bile acid symporter family AF_RS02430 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS02430 PF17862 AAA+ lid domain AF_RS02430 PF01434 Peptidase family M41 AF_RS02450 PF00227 Proteasome subunit AF_RS02455 PF10996 Beta-Casp domain AF_RS02455 PF00753 Metallo-beta-lactamase superfamily AF_RS02455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AF_RS02465 PF00925 GTP cyclohydrolase II AF_RS02465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AF_RS02480 PF01804 Penicillin amidase AF_RS02505 PF00575 S1 RNA binding domain AF_RS02505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AF_RS02505 PF01138 3' exoribonuclease family, domain 1 AF_RS02505 PF03725 3' exoribonuclease family, domain 2 AF_RS02505 PF00013 KH domain AF_RS02510 PF00013 KH domain AF_RS02510 PF00575 S1 RNA binding domain AF_RS02510 PF03725 3' exoribonuclease family, domain 2 AF_RS02510 PF01138 3' exoribonuclease family, domain 1 AF_RS02510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AF_RS02515 PF03725 3' exoribonuclease family, domain 2 AF_RS02515 PF01138 3' exoribonuclease family, domain 1 AF_RS02530 PF00136 DNA polymerase family B AF_RS02530 PF03104 DNA polymerase family B, exonuclease domain AF_RS02540 PF13247 4Fe-4S dicluster domain AF_RS02575 PF02754 Cysteine-rich domain AF_RS02575 PF02665 Nitrate reductase gamma subunit AF_RS02575 PF13183 4Fe-4S dicluster domain AF_RS02585 PF01680 SOR/SNZ family AF_RS02590 PF01174 SNO glutamine amidotransferase family AF_RS02605 PF01209 ubiE/COQ5 methyltransferase family AF_RS02645 PF00288 GHMP kinases N terminal domain AF_RS02645 PF08544 GHMP kinases C terminal AF_RS02655 PF07687 Peptidase dimerisation domain AF_RS02655 PF01546 Peptidase family M20/M25/M40 AF_RS02680 PF03725 3' exoribonuclease family, domain 2 AF_RS02680 PF00575 S1 RNA binding domain AF_RS02680 PF00013 KH domain AF_RS02680 PF01138 3' exoribonuclease family, domain 1 AF_RS02680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AF_RS02685 PF00175 Oxidoreductase NAD-binding domain AF_RS02685 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AF_RS02685 PF00970 Oxidoreductase FAD-binding domain AF_RS02700 PF00899 ThiF family AF_RS02705 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AF_RS02705 PF12706 Beta-lactamase superfamily domain AF_RS02705 PF17770 Ribonuclease J C-terminal domain AF_RS02720 PF12327 FtsZ family, C-terminal domain AF_RS02720 PF00091 Tubulin/FtsZ family, GTPase domain AF_RS02735 PF00298 Ribosomal protein L11, RNA binding domain AF_RS02735 PF03946 Ribosomal protein L11, N-terminal domain AF_RS02765 PF02754 Cysteine-rich domain AF_RS02780 PF02754 Cysteine-rich domain AF_RS02785 PF02824 TGS domain AF_RS02785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF_RS02785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AF_RS02785 PF03129 Anticodon binding domain AF_RS02795 PF01979 Amidohydrolase family AF_RS02800 PF00291 Pyridoxal-phosphate dependent enzyme AF_RS02805 PF02597 ThiS family AF_RS02810 PF00899 ThiF family AF_RS02825 PF11823 Protein of unknown function (DUF3343) AF_RS02825 PF01206 Sulfurtransferase TusA AF_RS02830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS02865 PF00266 Aminotransferase class-V AF_RS02870 PF01592 NifU-like N terminal domain AF_RS02895 PF12327 FtsZ family, C-terminal domain AF_RS02895 PF00091 Tubulin/FtsZ family, GTPase domain AF_RS02920 PF00753 Metallo-beta-lactamase superfamily AF_RS02945 PF03372 Endonuclease/Exonuclease/phosphatase family AF_RS02950 PF00535 Glycosyl transferase family 2 AF_RS02965 PF01037 Lrp/AsnC ligand binding domain AF_RS02985 PF01702 Queuine tRNA-ribosyltransferase AF_RS02990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AF_RS02990 PF14572 Phosphoribosyl synthetase-associated domain AF_RS02995 PF01634 ATP phosphoribosyltransferase AF_RS02995 PF08029 HisG, C-terminal domain AF_RS03005 PF00009 Elongation factor Tu GTP binding domain AF_RS03005 PF03143 Elongation factor Tu C-terminal domain AF_RS03005 PF03144 Elongation factor Tu domain 2 AF_RS03025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AF_RS03025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AF_RS03025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AF_RS03075 PF13439 Glycosyltransferase Family 4 AF_RS03075 PF00534 Glycosyl transferases group 1 AF_RS03080 PF00534 Glycosyl transferases group 1 AF_RS03140 PF00534 Glycosyl transferases group 1 AF_RS03140 PF13439 Glycosyltransferase Family 4 AF_RS03165 PF01351 Ribonuclease HII AF_RS03170 PF00448 SRP54-type protein, GTPase domain AF_RS03170 PF02881 SRP54-type protein, helical bundle domain AF_RS03170 PF02978 Signal peptide binding domain AF_RS03175 PF04679 ATP dependent DNA ligase C terminal region AF_RS03175 PF01068 ATP dependent DNA ligase domain AF_RS03175 PF04675 DNA ligase N terminus AF_RS03200 PF00180 Isocitrate/isopropylmalate dehydrogenase AF_RS03205 PF00694 Aconitase C-terminal domain AF_RS03220 PF01106 NifU-like domain AF_RS03225 PF08264 Anticodon-binding domain of tRNA AF_RS03225 PF00133 tRNA synthetases class I (I, L, M and V) AF_RS03230 PF01113 Dihydrodipicolinate reductase, N-terminus AF_RS03235 PF16868 NMT1-like family AF_RS03250 PF00005 ABC transporter AF_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS03260 PF00005 ABC transporter AF_RS03285 PF00491 Arginase family AF_RS03290 PF00180 Isocitrate/isopropylmalate dehydrogenase AF_RS03325 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS03325 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AF_RS03325 PF10518 TAT (twin-arginine translocation) pathway signal sequence AF_RS03330 PF01523 Putative modulator of DNA gyrase AF_RS03350 PF00437 Type II/IV secretion system protein AF_RS03355 PF03819 MazG nucleotide pyrophosphohydrolase domain AF_RS03365 PF04205 FMN-binding domain AF_RS03365 PF03358 NADPH-dependent FMN reductase AF_RS03365 PF00890 FAD binding domain AF_RS03370 PF01593 Flavin containing amine oxidoreductase AF_RS03380 PF00069 Protein kinase domain AF_RS03380 PF03793 PASTA domain AF_RS03400 PF01264 Chorismate synthase AF_RS03405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS03405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS03405 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS03410 PF00501 AMP-binding enzyme AF_RS03410 PF13193 AMP-binding enzyme C-terminal domain AF_RS03415 PF00376 MerR family regulatory protein AF_RS03415 PF09278 MerR, DNA binding AF_RS03430 PF05191 Adenylate kinase, active site lid AF_RS03435 PF00501 AMP-binding enzyme AF_RS03435 PF16177 Acetyl-coenzyme A synthetase N-terminus AF_RS03435 PF13193 AMP-binding enzyme C-terminal domain AF_RS03450 PF00005 ABC transporter AF_RS03455 PF00890 FAD binding domain AF_RS03455 PF02910 Fumarate reductase flavoprotein C-term AF_RS03460 PF13183 4Fe-4S dicluster domain AF_RS03460 PF13085 2Fe-2S iron-sulfur cluster binding domain AF_RS03480 PF00378 Enoyl-CoA hydratase/isomerase AF_RS03490 PF00501 AMP-binding enzyme AF_RS03490 PF13193 AMP-binding enzyme C-terminal domain AF_RS03505 PF00850 Histone deacetylase domain AF_RS03510 PF00970 Oxidoreductase FAD-binding domain AF_RS03510 PF00111 2Fe-2S iron-sulfur cluster binding domain AF_RS03510 PF00175 Oxidoreductase NAD-binding domain AF_RS03540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AF_RS03550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AF_RS03550 PF02272 DHHA1 domain AF_RS03550 PF01411 tRNA synthetases class II (A) AF_RS03555 PF00696 Amino acid kinase family AF_RS03555 PF01842 ACT domain AF_RS03555 PF13840 ACT domain AF_RS03555 PF00742 Homoserine dehydrogenase AF_RS03555 PF03447 Homoserine dehydrogenase, NAD binding domain AF_RS03590 PF01255 Putative undecaprenyl diphosphate synthase AF_RS03605 PF00391 PEP-utilising enzyme, mobile domain AF_RS03605 PF02896 PEP-utilising enzyme, TIM barrel domain AF_RS03605 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AF_RS03620 PF00977 Histidine biosynthesis protein AF_RS03665 PF01888 CbiD AF_RS03670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF_RS03680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF_RS03690 PF01891 Cobalt uptake substrate-specific transmembrane region AF_RS03705 PF00005 ABC transporter AF_RS03715 PF02769 AIR synthase related protein, C-terminal domain AF_RS03715 PF00586 AIR synthase related protein, N-terminal domain AF_RS03735 PF02597 ThiS family AF_RS03755 PF01894 Uncharacterised protein family UPF0047 AF_RS03765 PF08753 NikR C terminal nickel binding domain AF_RS03765 PF01402 Ribbon-helix-helix protein, copG family AF_RS03770 PF03144 Elongation factor Tu domain 2 AF_RS03770 PF03143 Elongation factor Tu C-terminal domain AF_RS03770 PF00009 Elongation factor Tu GTP binding domain AF_RS03775 PF01180 Dihydroorotate dehydrogenase AF_RS03785 PF01678 Diaminopimelate epimerase AF_RS03800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS03825 PF02665 Nitrate reductase gamma subunit AF_RS03825 PF02754 Cysteine-rich domain AF_RS03825 PF13183 4Fe-4S dicluster domain AF_RS03830 PF02833 DHHA2 domain AF_RS03830 PF01368 DHH family AF_RS03885 PF00334 Nucleoside diphosphate kinase AF_RS03890 PF04760 Translation initiation factor IF-2, N-terminal region AF_RS03890 PF11987 Translation-initiation factor 2 AF_RS03890 PF00009 Elongation factor Tu GTP binding domain AF_RS03930 PF00579 tRNA synthetases class I (W and Y) AF_RS03955 PF01300 Telomere recombination AF_RS03955 PF03481 Putative GTP-binding controlling metal-binding AF_RS03970 PF02416 mttA/Hcf106 family AF_RS03980 PF01544 CorA-like Mg2+ transporter protein AF_RS03995 PF00892 EamA-like transporter family AF_RS04040 PF04055 Radical SAM superfamily AF_RS04045 PF04055 Radical SAM superfamily AF_RS04055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AF_RS04055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AF_RS04085 PF02652 L-lactate permease AF_RS04090 PF01070 FMN-dependent dehydrogenase AF_RS04095 PF01565 FAD binding domain AF_RS04095 PF02913 FAD linked oxidases, C-terminal domain AF_RS04115 PF11870 Domain of unknown function (DUF3390) AF_RS04115 PF13183 4Fe-4S dicluster domain AF_RS04115 PF02589 LUD domain AF_RS04130 PF01842 ACT domain AF_RS04130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AF_RS04130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF_RS04135 PF03266 NTPase AF_RS04140 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase AF_RS04155 PF00708 Acylphosphatase AF_RS04160 PF00977 Histidine biosynthesis protein AF_RS04175 PF00005 ABC transporter AF_RS04180 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF_RS04180 PF00005 ABC transporter AF_RS04190 PF02653 Branched-chain amino acid transport system / permease component AF_RS04215 PF00301 Rubredoxin AF_RS04215 PF01613 Flavin reductase like domain AF_RS04220 PF02915 Rubrerythrin AF_RS04225 PF02915 Rubrerythrin AF_RS04230 PF06397 Desulfoferrodoxin, N-terminal domain AF_RS04230 PF01880 Desulfoferrodoxin AF_RS04235 PF00210 Ferritin-like domain AF_RS04250 PF02080 TrkA-C domain AF_RS04250 PF02254 TrkA-N domain AF_RS04255 PF02386 Cation transport protein AF_RS04260 PF13193 AMP-binding enzyme C-terminal domain AF_RS04260 PF00501 AMP-binding enzyme AF_RS04265 PF00709 Adenylosuccinate synthetase AF_RS04285 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS04285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS04285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS04290 PF00999 Sodium/hydrogen exchanger family AF_RS04295 PF00571 CBS domain AF_RS04295 PF00005 ABC transporter AF_RS04300 PF00571 CBS domain AF_RS04315 PF03853 YjeF-related protein N-terminus AF_RS04320 PF00464 Serine hydroxymethyltransferase AF_RS04325 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AF_RS04325 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AF_RS04325 PF01189 16S rRNA methyltransferase RsmB/F AF_RS04335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AF_RS04335 PF00056 lactate/malate dehydrogenase, NAD binding domain AF_RS04360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AF_RS04370 PF01139 tRNA-splicing ligase RtcB AF_RS04385 PF00561 alpha/beta hydrolase fold AF_RS04390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AF_RS04390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AF_RS04400 PF01565 FAD binding domain AF_RS04400 PF02913 FAD linked oxidases, C-terminal domain AF_RS04405 PF01906 Putative heavy-metal-binding AF_RS04410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AF_RS04410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AF_RS04420 PF00156 Phosphoribosyl transferase domain AF_RS04440 PF00565 Staphylococcal nuclease homologue AF_RS04440 PF00746 LPXTG cell wall anchor motif AF_RS04440 PF00149 Calcineurin-like phosphoesterase AF_RS04440 PF02872 5'-nucleotidase, C-terminal domain AF_RS04455 PF02926 THUMP domain AF_RS04455 PF02568 Thiamine biosynthesis protein (ThiI) AF_RS04460 PF00301 Rubredoxin AF_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS04470 PF00672 HAMP domain AF_RS04470 PF00512 His Kinase A (phospho-acceptor) domain AF_RS04475 PF17763 Glutaminase/Asparaginase C-terminal domain AF_RS04475 PF00710 Asparaginase, N-terminal AF_RS04480 PF00206 Lyase AF_RS04480 PF14698 Argininosuccinate lyase C-terminal AF_RS04495 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AF_RS04495 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AF_RS04500 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AF_RS04500 PF05221 S-adenosyl-L-homocysteine hydrolase AF_RS04505 PF00005 ABC transporter AF_RS04510 PF02653 Branched-chain amino acid transport system / permease component AF_RS04515 PF02653 Branched-chain amino acid transport system / permease component AF_RS04520 PF02608 ABC transporter substrate-binding protein PnrA-like AF_RS04535 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AF_RS04535 PF17203 Single cache domain 3 AF_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS04535 PF00989 PAS fold AF_RS04540 PF00750 tRNA synthetases class I (R) AF_RS04540 PF03485 Arginyl tRNA synthetase N terminal domain AF_RS04540 PF05746 DALR anticodon binding domain AF_RS04570 PF01931 Protein of unknown function DUF84 AF_RS04585 PF07687 Peptidase dimerisation domain AF_RS04585 PF01546 Peptidase family M20/M25/M40 AF_RS04600 PF07690 Major Facilitator Superfamily AF_RS04610 PF05173 Dihydrodipicolinate reductase, C-terminus AF_RS04610 PF01113 Dihydrodipicolinate reductase, N-terminus AF_RS04615 PF00701 Dihydrodipicolinate synthetase family AF_RS04635 PF01253 Translation initiation factor SUI1 AF_RS04645 PF03129 Anticodon binding domain AF_RS04645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF_RS04650 PF01933 Uncharacterised protein family UPF0052 AF_RS04665 PF01336 OB-fold nucleic acid binding domain AF_RS04665 PF00152 tRNA synthetases class II (D, K and N) AF_RS04690 PF03061 Thioesterase superfamily AF_RS04700 PF13419 Haloacid dehalogenase-like hydrolase AF_RS04705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AF_RS04710 PF03453 MoeA N-terminal region (domain I and II) AF_RS04710 PF03454 MoeA C-terminal region (domain IV) AF_RS04710 PF00994 Probable molybdopterin binding domain AF_RS04715 PF03454 MoeA C-terminal region (domain IV) AF_RS04715 PF00994 Probable molybdopterin binding domain AF_RS04715 PF03453 MoeA N-terminal region (domain I and II) AF_RS04720 PF13607 Succinyl-CoA ligase like flavodoxin domain AF_RS04720 PF13380 CoA binding domain AF_RS04725 PF01063 Amino-transferase class IV AF_RS04735 PF01842 ACT domain AF_RS04735 PF00742 Homoserine dehydrogenase AF_RS04735 PF03447 Homoserine dehydrogenase, NAD binding domain AF_RS04745 PF03143 Elongation factor Tu C-terminal domain AF_RS04745 PF03144 Elongation factor Tu domain 2 AF_RS04745 PF00009 Elongation factor Tu GTP binding domain AF_RS04750 PF00338 Ribosomal protein S10p/S20e AF_RS04755 PF12706 Beta-lactamase superfamily domain AF_RS04770 PF01975 Survival protein SurE AF_RS04775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AF_RS04805 PF00120 Glutamine synthetase, catalytic domain AF_RS04805 PF03951 Glutamine synthetase, beta-Grasp domain AF_RS04810 PF12800 4Fe-4S binding domain AF_RS04810 PF13247 4Fe-4S dicluster domain AF_RS04815 PF04324 BFD-like [2Fe-2S] binding domain AF_RS04815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AF_RS04815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AF_RS04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS04815 PF18267 Rubredoxin NAD+ reductase C-terminal domain AF_RS04820 PF00310 Glutamine amidotransferases class-II AF_RS04825 PF01645 Conserved region in glutamate synthase AF_RS04825 PF13187 4Fe-4S dicluster domain AF_RS04845 PF08502 LeuA allosteric (dimerisation) domain AF_RS04845 PF00682 HMGL-like AF_RS04850 PF00005 ABC transporter AF_RS04855 PF00005 ABC transporter AF_RS04855 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF_RS04860 PF11862 Domain of unknown function (DUF3382) AF_RS04860 PF02653 Branched-chain amino acid transport system / permease component AF_RS04875 PF00378 Enoyl-CoA hydratase/isomerase AF_RS04880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS04880 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS04880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS04905 PF00474 Sodium:solute symporter family AF_RS04920 PF00929 Exonuclease AF_RS04925 PF02515 CoA-transferase family III AF_RS04930 PF02515 CoA-transferase family III AF_RS04935 PF13193 AMP-binding enzyme C-terminal domain AF_RS04935 PF00501 AMP-binding enzyme AF_RS04935 PF16177 Acetyl-coenzyme A synthetase N-terminus AF_RS04940 PF13193 AMP-binding enzyme C-terminal domain AF_RS04940 PF00501 AMP-binding enzyme AF_RS04945 PF00909 Ammonium Transporter Family AF_RS04950 PF00543 Nitrogen regulatory protein P-II AF_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS04960 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS04965 PF00005 ABC transporter AF_RS04965 PF00571 CBS domain AF_RS04970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AF_RS04985 PF00005 ABC transporter AF_RS04990 PF00475 Imidazoleglycerol-phosphate dehydratase AF_RS04995 PF00977 Histidine biosynthesis protein AF_RS05015 PF02515 CoA-transferase family III AF_RS05020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS05020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS05020 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS05035 PF01966 HD domain AF_RS05045 PF00437 Type II/IV secretion system protein AF_RS05050 PF01979 Amidohydrolase family AF_RS05065 PF02540 NAD synthase AF_RS05095 PF00005 ABC transporter AF_RS05140 PF00920 Dehydratase family AF_RS05155 PF12704 MacB-like periplasmic core domain AF_RS05155 PF02687 FtsX-like permease family AF_RS05160 PF00005 ABC transporter AF_RS05175 PF00005 ABC transporter AF_RS05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AF_RS05180 PF03459 TOBE domain AF_RS05190 PF00270 DEAD/DEAH box helicase AF_RS05190 PF01131 DNA topoisomerase AF_RS05190 PF01751 Toprim domain AF_RS05190 PF17915 Reverse gyrase zinc finger AF_RS05195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS05195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS05200 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS05200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS05200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS05205 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AF_RS05205 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AF_RS05210 PF00108 Thiolase, N-terminal domain AF_RS05210 PF02803 Thiolase, C-terminal domain AF_RS05215 PF13193 AMP-binding enzyme C-terminal domain AF_RS05215 PF00501 AMP-binding enzyme AF_RS05220 PF01935 Helicase HerA, central domain AF_RS05220 PF09378 HAS barrel domain AF_RS05230 PF02463 RecF/RecN/SMC N terminal domain AF_RS05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF_RS05240 PF00672 HAMP domain AF_RS05240 PF17202 Single cache domain 3 AF_RS05255 PF03705 CheR methyltransferase, all-alpha domain AF_RS05255 PF01739 CheR methyltransferase, SAM binding domain AF_RS05260 PF03975 CheD chemotactic sensory transduction AF_RS05265 PF04509 CheC-like family AF_RS05270 PF01627 Hpt domain AF_RS05270 PF07194 P2 response regulator binding domain AF_RS05270 PF01584 CheW-like domain AF_RS05270 PF02895 Signal transducing histidine kinase, homodimeric domain AF_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS05275 PF01339 CheB methylesterase AF_RS05275 PF00072 Response regulator receiver domain AF_RS05280 PF00072 Response regulator receiver domain AF_RS05290 PF01584 CheW-like domain AF_RS05295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF_RS05295 PF00672 HAMP domain AF_RS05295 PF17202 Single cache domain 3 AF_RS05315 PF00437 Type II/IV secretion system protein AF_RS05390 PF00072 Response regulator receiver domain AF_RS05395 PF00005 ABC transporter AF_RS05405 PF00296 Luciferase-like monooxygenase AF_RS05420 PF00474 Sodium:solute symporter family AF_RS05425 PF14535 AMP-binding enzyme C-terminal domain AF_RS05425 PF00501 AMP-binding enzyme AF_RS05435 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AF_RS05540 PF01050 Mannose-6-phosphate isomerase AF_RS05540 PF00483 Nucleotidyl transferase AF_RS05550 PF05681 Fumarate hydratase (Fumerase) AF_RS05550 PF05683 Fumarase C-terminus AF_RS05595 PF02577 Bifunctional nuclease AF_RS05620 PF00814 Glycoprotease family AF_RS05645 PF01138 3' exoribonuclease family, domain 1 AF_RS05645 PF00013 KH domain AF_RS05645 PF00575 S1 RNA binding domain AF_RS05645 PF03725 3' exoribonuclease family, domain 2 AF_RS05645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AF_RS05670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS05670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS05690 PF13186 Iron-sulfur cluster-binding domain AF_RS05690 PF04055 Radical SAM superfamily AF_RS05705 PF00572 Ribosomal protein L13 AF_RS05710 PF00380 Ribosomal protein S9/S16 AF_RS05725 PF00113 Enolase, C-terminal TIM barrel domain AF_RS05725 PF03952 Enolase, N-terminal domain AF_RS05730 PF00318 Ribosomal protein S2 AF_RS05745 PF00005 ABC transporter AF_RS05760 PF00005 ABC transporter AF_RS05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS05770 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS05775 PF00483 Nucleotidyl transferase AF_RS05785 PF07690 Major Facilitator Superfamily AF_RS05790 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AF_RS05790 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AF_RS05795 PF00162 Phosphoglycerate kinase AF_RS05800 PF01960 ArgJ family AF_RS05805 PF01037 Lrp/AsnC ligand binding domain AF_RS05810 PF08494 DEAD/H associated AF_RS05810 PF00270 DEAD/DEAH box helicase AF_RS05810 PF00271 Helicase conserved C-terminal domain AF_RS05860 PF02844 Phosphoribosylglycinamide synthetase, N domain AF_RS05860 PF02843 Phosphoribosylglycinamide synthetase, C domain AF_RS05860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AF_RS05870 PF01496 V-type ATPase 116kDa subunit family AF_RS05895 PF01992 ATP synthase (C/AC39) subunit AF_RS05905 PF16886 ATPsynthase alpha/beta subunit N-term extension AF_RS05905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AF_RS05905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF_RS05910 PF02874 ATP synthase alpha/beta family, beta-barrel domain AF_RS05910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF_RS05915 PF01813 ATP synthase subunit D AF_RS05920 PF02632 BioY family AF_RS05925 PF12558 ATP-binding cassette cobalt transporter AF_RS05925 PF00005 ABC transporter AF_RS05950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS05950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS05950 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS05960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS05960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS05985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AF_RS05985 PF01926 50S ribosome-binding GTPase AF_RS06000 PF00989 PAS fold AF_RS06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS06000 PF00512 His Kinase A (phospho-acceptor) domain AF_RS06010 PF00478 IMP dehydrogenase / GMP reductase domain AF_RS06010 PF00571 CBS domain AF_RS06030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS06030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS06035 PF00378 Enoyl-CoA hydratase/isomerase AF_RS06040 PF13380 CoA binding domain AF_RS06040 PF13607 Succinyl-CoA ligase like flavodoxin domain AF_RS06055 PF12002 MgsA AAA+ ATPase C terminal AF_RS06055 PF05496 Holliday junction DNA helicase RuvB P-loop domain AF_RS06055 PF16193 AAA C-terminal domain AF_RS06060 PF00296 Luciferase-like monooxygenase AF_RS06065 PF02803 Thiolase, C-terminal domain AF_RS06065 PF00108 Thiolase, N-terminal domain AF_RS06090 PF12800 4Fe-4S binding domain AF_RS06090 PF13247 4Fe-4S dicluster domain AF_RS06095 PF00384 Molybdopterin oxidoreductase AF_RS06095 PF01568 Molydopterin dinucleotide binding domain AF_RS06105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS06105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS06125 PF05853 beta-keto acid cleavage enzyme AF_RS06130 PF13607 Succinyl-CoA ligase like flavodoxin domain AF_RS06130 PF13380 CoA binding domain AF_RS06135 PF07085 DRTGG domain AF_RS06145 PF02441 Flavoprotein AF_RS06150 PF12327 FtsZ family, C-terminal domain AF_RS06150 PF00091 Tubulin/FtsZ family, GTPase domain AF_RS06155 PF01921 tRNA synthetases class I (K) AF_RS06170 PF01255 Putative undecaprenyl diphosphate synthase AF_RS06180 PF00474 Sodium:solute symporter family AF_RS06190 PF01966 HD domain AF_RS06190 PF00013 KH domain AF_RS06190 PF12072 Domain of unknown function (DUF3552) AF_RS06215 PF03176 MMPL family AF_RS06215 PF12823 Domain of unknown function (DUF3817) AF_RS06225 PF01978 Sugar-specific transcriptional regulator TrmB AF_RS06225 PF11495 Archaeal transcriptional regulator TrmB AF_RS06235 PF00293 NUDIX domain AF_RS06235 PF13344 Haloacid dehalogenase-like hydrolase AF_RS06255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AF_RS06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS06265 PF00291 Pyridoxal-phosphate dependent enzyme AF_RS06270 PF00202 Aminotransferase class-III AF_RS06275 PF03900 Porphobilinogen deaminase, C-terminal domain AF_RS06275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AF_RS06280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF_RS06290 PF00999 Sodium/hydrogen exchanger family AF_RS06300 PF01938 TRAM domain AF_RS06300 PF00919 Uncharacterized protein family UPF0004 AF_RS06300 PF04055 Radical SAM superfamily AF_RS06305 PF04474 Protein of unknown function (DUF554) AF_RS06325 PF00682 HMGL-like AF_RS06325 PF00364 Biotin-requiring enzyme AF_RS06325 PF02436 Conserved carboxylase domain AF_RS06340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AF_RS06340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AF_RS06345 PF00072 Response regulator receiver domain AF_RS06345 PF01339 CheB methylesterase AF_RS06350 PF01170 Putative RNA methylase family UPF0020 AF_RS06350 PF02926 THUMP domain AF_RS06360 PF00571 CBS domain AF_RS06360 PF00005 ABC transporter AF_RS06370 PF13193 AMP-binding enzyme C-terminal domain AF_RS06370 PF00501 AMP-binding enzyme AF_RS06375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AF_RS06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS06405 PF00005 ABC transporter AF_RS06405 PF09383 NIL domain AF_RS06415 PF00731 AIR carboxylase AF_RS06420 PF01259 SAICAR synthetase AF_RS06425 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AF_RS06425 PF00117 Glutamine amidotransferase class-I AF_RS06430 PF02142 MGS-like domain AF_RS06430 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AF_RS06430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF_RS06435 PF00731 AIR carboxylase AF_RS06445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AF_RS06445 PF00117 Glutamine amidotransferase class-I AF_RS06460 PF00696 Amino acid kinase family AF_RS06470 PF01965 DJ-1/PfpI family AF_RS06485 PF00085 Thioredoxin AF_RS06490 PF01434 Peptidase family M41 AF_RS06490 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS06490 PF17862 AAA+ lid domain AF_RS06500 PF13193 AMP-binding enzyme C-terminal domain AF_RS06500 PF00501 AMP-binding enzyme AF_RS06505 PF02310 B12 binding domain AF_RS06505 PF01642 Methylmalonyl-CoA mutase AF_RS06510 PF01642 Methylmalonyl-CoA mutase AF_RS06510 PF02310 B12 binding domain AF_RS06525 PF00108 Thiolase, N-terminal domain AF_RS06525 PF02803 Thiolase, C-terminal domain AF_RS06535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS06535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS06535 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS06555 PF00011 Hsp20/alpha crystallin family AF_RS06560 PF17862 AAA+ lid domain AF_RS06560 PF01434 Peptidase family M41 AF_RS06560 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS06575 PF00005 ABC transporter AF_RS06585 PF00121 Triosephosphate isomerase AF_RS06590 PF08714 Formaldehyde-activating enzyme (Fae) AF_RS06605 PF02223 Thymidylate kinase AF_RS06620 PF04055 Radical SAM superfamily AF_RS06620 PF06969 HemN C-terminal domain AF_RS06640 PF02515 CoA-transferase family III AF_RS06645 PF00291 Pyridoxal-phosphate dependent enzyme AF_RS06670 PF00958 GMP synthase C terminal domain AF_RS06670 PF02540 NAD synthase AF_RS06670 PF00117 Glutamine amidotransferase class-I AF_RS06675 PF01171 PP-loop family AF_RS06690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AF_RS06690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AF_RS06700 PF01926 50S ribosome-binding GTPase AF_RS06710 PF01266 FAD dependent oxidoreductase AF_RS06750 PF03186 CobD/Cbib protein AF_RS06760 PF07685 CobB/CobQ-like glutamine amidotransferase domain AF_RS06765 PF00252 Ribosomal protein L16p/L10e AF_RS06770 PF00285 Citrate synthase, C-terminal domain AF_RS06775 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AF_RS06775 PF00591 Glycosyl transferase family, a/b domain AF_RS06775 PF02885 Glycosyl transferase family, helical bundle domain AF_RS06780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AF_RS06780 PF02885 Glycosyl transferase family, helical bundle domain AF_RS06780 PF00591 Glycosyl transferase family, a/b domain AF_RS06785 PF00753 Metallo-beta-lactamase superfamily AF_RS06785 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF_RS06790 PF00902 Sec-independent protein translocase protein (TatC) AF_RS06810 PF00301 Rubredoxin AF_RS06815 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF_RS06815 PF00753 Metallo-beta-lactamase superfamily AF_RS06835 PF13462 Thioredoxin AF_RS06835 PF06965 Na+/H+ antiporter 1 AF_RS06845 PF12849 PBP superfamily domain AF_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS06855 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS06860 PF00005 ABC transporter AF_RS06865 PF01895 PhoU domain AF_RS06885 PF01926 50S ribosome-binding GTPase AF_RS06885 PF01018 GTP1/OBG AF_RS06885 PF09269 Domain of unknown function (DUF1967) AF_RS06890 PF02769 AIR synthase related protein, C-terminal domain AF_RS06890 PF00586 AIR synthase related protein, N-terminal domain AF_RS06895 PF07503 HypF finger AF_RS06895 PF01300 Telomere recombination AF_RS06895 PF00708 Acylphosphatase AF_RS06895 PF17788 HypF Kae1-like domain AF_RS06900 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AF_RS06905 PF02492 CobW/HypB/UreG, nucleotide-binding domain AF_RS06910 PF01455 HupF/HypC family AF_RS06915 PF01924 Hydrogenase formation hypA family AF_RS06925 PF00374 Nickel-dependent hydrogenase AF_RS06930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AF_RS06950 PF01494 FAD binding domain AF_RS06955 PF01750 Hydrogenase maturation protease AF_RS06965 PF00374 Nickel-dependent hydrogenase AF_RS06970 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AF_RS06970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AF_RS06985 PF00072 Response regulator receiver domain AF_RS07000 PF00005 ABC transporter AF_RS07005 PF00005 ABC transporter AF_RS07005 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF_RS07045 PF13249 Squalene-hopene cyclase N-terminal domain AF_RS07045 PF13243 Squalene-hopene cyclase C-terminal domain AF_RS07050 PF13360 PQQ-like domain AF_RS07060 PF00005 ABC transporter AF_RS07065 PF01032 FecCD transport family AF_RS07100 PF01555 DNA methylase AF_RS07135 PF14251 Domain of unknown function (DUF4346) AF_RS07140 PF00654 Voltage gated chloride channel AF_RS07150 PF00266 Aminotransferase class-V AF_RS07155 PF00294 pfkB family carbohydrate kinase AF_RS07155 PF01467 Cytidylyltransferase-like AF_RS07160 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AF_RS07160 PF14572 Phosphoribosyl synthetase-associated domain AF_RS07165 PF01145 SPFH domain / Band 7 family AF_RS07165 PF16200 C-terminal region of band_7 AF_RS07170 PF03699 Uncharacterised protein family (UPF0182) AF_RS07175 PF01177 Asp/Glu/Hydantoin racemase AF_RS07180 PF01966 HD domain AF_RS07185 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AF_RS07185 PF03484 tRNA synthetase B5 domain AF_RS07190 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AF_RS07190 PF01676 Metalloenzyme superfamily AF_RS07195 PF00230 Major intrinsic protein AF_RS07230 PF01949 Protein of unknown function DUF99 AF_RS07240 PF01137 RNA 3'-terminal phosphate cyclase AF_RS07240 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AF_RS07265 PF02934 GatB/GatE catalytic domain AF_RS07265 PF02637 GatB domain AF_RS07275 PF01950 Fructose-1,6-bisphosphatase AF_RS07280 PF06745 KaiC AF_RS07305 PF01037 Lrp/AsnC ligand binding domain AF_RS07310 PF01228 Glycine radical AF_RS07310 PF02901 Pyruvate formate lyase-like AF_RS07315 PF04055 Radical SAM superfamily AF_RS07320 PF00118 TCP-1/cpn60 chaperonin family AF_RS07325 PF08448 PAS fold AF_RS07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS07325 PF08447 PAS fold AF_RS07330 PF01588 Putative tRNA binding domain AF_RS07330 PF09334 tRNA synthetases class I (M) AF_RS07360 PF02559 CarD-like/TRCF domain AF_RS07360 PF00270 DEAD/DEAH box helicase AF_RS07360 PF00271 Helicase conserved C-terminal domain AF_RS07360 PF03461 TRCF domain AF_RS07360 PF17757 UvrB interaction domain AF_RS07385 PF00890 FAD binding domain AF_RS07415 PF00005 ABC transporter AF_RS07420 PF12704 MacB-like periplasmic core domain AF_RS07420 PF02687 FtsX-like permease family AF_RS07420 PF00005 ABC transporter AF_RS07430 PF02954 Bacterial regulatory protein, Fis family AF_RS07430 PF00072 Response regulator receiver domain AF_RS07430 PF00158 Sigma-54 interaction domain AF_RS07435 PF00072 Response regulator receiver domain AF_RS07445 PF03073 TspO/MBR family AF_RS07450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AF_RS07480 PF01702 Queuine tRNA-ribosyltransferase AF_RS07485 PF14010 Phosphoenolpyruvate carboxylase AF_RS07500 PF01467 Cytidylyltransferase-like AF_RS07500 PF00293 NUDIX domain AF_RS07510 PF00687 Ribosomal protein L1p/L10e family AF_RS07515 PF00466 Ribosomal protein L10 AF_RS07545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AF_RS07590 PF02774 Semialdehyde dehydrogenase, dimerisation domain AF_RS07590 PF01118 Semialdehyde dehydrogenase, NAD binding domain AF_RS07605 PF00753 Metallo-beta-lactamase superfamily AF_RS07610 PF13193 AMP-binding enzyme C-terminal domain AF_RS07610 PF00501 AMP-binding enzyme AF_RS07615 PF00549 CoA-ligase AF_RS07615 PF02629 CoA binding domain AF_RS07620 PF00902 Sec-independent protein translocase protein (TatC) AF_RS07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS07640 PF00512 His Kinase A (phospho-acceptor) domain AF_RS07645 PF03749 Sugar fermentation stimulation protein RE domain AF_RS07645 PF17746 SfsA N-terminal OB domain AF_RS07655 PF02441 Flavoprotein AF_RS07665 PF00753 Metallo-beta-lactamase superfamily AF_RS07665 PF00258 Flavodoxin AF_RS07675 PF01661 Macro domain AF_RS07680 PF17176 tRNA-binding domain AF_RS07680 PF08351 Domain of unknown function (DUF1726) AF_RS07680 PF13718 GNAT acetyltransferase 2 AF_RS07680 PF05127 Helicase AF_RS07755 PF12697 Alpha/beta hydrolase family AF_RS07760 PF02667 Short chain fatty acid transporter AF_RS07765 PF00549 CoA-ligase AF_RS07765 PF02629 CoA binding domain AF_RS07770 PF08442 ATP-grasp domain AF_RS07770 PF00549 CoA-ligase AF_RS07775 PF07690 Major Facilitator Superfamily AF_RS07780 PF03551 Transcriptional regulator PadR-like family AF_RS07800 PF05552 Conserved TM helix AF_RS07800 PF00924 Mechanosensitive ion channel AF_RS07820 PF00348 Polyprenyl synthetase AF_RS07830 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AF_RS07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS07850 PF02463 RecF/RecN/SMC N terminal domain AF_RS07850 PF06470 SMC proteins Flexible Hinge Domain AF_RS07875 PF12146 Serine aminopeptidase, S33 AF_RS07955 PF04079 Segregation and condensation complex subunit ScpB AF_RS07995 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AF_RS07995 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AF_RS08020 PF01488 Shikimate / quinate 5-dehydrogenase AF_RS08020 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AF_RS08030 PF01171 PP-loop family AF_RS08045 PF00290 Tryptophan synthase alpha chain AF_RS08050 PF00291 Pyridoxal-phosphate dependent enzyme AF_RS08055 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AF_RS08060 PF02885 Glycosyl transferase family, helical bundle domain AF_RS08060 PF00117 Glutamine amidotransferase class-I AF_RS08060 PF00591 Glycosyl transferase family, a/b domain AF_RS08065 PF04715 Anthranilate synthase component I, N terminal region AF_RS08065 PF00425 chorismate binding enzyme AF_RS08070 PF00591 Glycosyl transferase family, a/b domain AF_RS08070 PF02885 Glycosyl transferase family, helical bundle domain AF_RS08085 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS08090 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS08095 PF00005 ABC transporter AF_RS08095 PF08402 TOBE domain AF_RS08100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF_RS08100 PF09180 Prolyl-tRNA synthetase, C-terminal AF_RS08100 PF03129 Anticodon binding domain AF_RS08105 PF02675 S-adenosylmethionine decarboxylase AF_RS08110 PF01861 Branched-chain polyamine synthase A C-terminal domain AF_RS08115 PF00324 Amino acid permease AF_RS08130 PF06463 Molybdenum Cofactor Synthesis C AF_RS08130 PF04055 Radical SAM superfamily AF_RS08160 PF01037 Lrp/AsnC ligand binding domain AF_RS08165 PF00155 Aminotransferase class I and II AF_RS08170 PF02597 ThiS family AF_RS08200 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AF_RS08240 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AF_RS08240 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AF_RS08245 PF00989 PAS fold AF_RS08245 PF00672 HAMP domain AF_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS08245 PF00512 His Kinase A (phospho-acceptor) domain AF_RS08250 PF02915 Rubrerythrin AF_RS08255 PF00378 Enoyl-CoA hydratase/isomerase AF_RS08260 PF13393 Histidyl-tRNA synthetase AF_RS08260 PF03129 Anticodon binding domain AF_RS08265 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AF_RS08275 PF04127 DNA / pantothenate metabolism flavoprotein AF_RS08275 PF02441 Flavoprotein AF_RS08310 PF05922 Peptidase inhibitor I9 AF_RS08310 PF00082 Subtilase family AF_RS08315 PF00082 Subtilase family AF_RS08370 PF00317 Ribonucleotide reductase, all-alpha domain AF_RS08370 PF02867 Ribonucleotide reductase, barrel domain AF_RS08370 PF03477 ATP cone domain AF_RS08375 PF02423 Ornithine cyclodeaminase/mu-crystallin family AF_RS08395 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit AF_RS08395 PF13187 4Fe-4S dicluster domain AF_RS08400 PF00890 FAD binding domain AF_RS08405 PF14535 AMP-binding enzyme C-terminal domain AF_RS08405 PF00501 AMP-binding enzyme AF_RS08420 PF13685 Iron-containing alcohol dehydrogenase AF_RS08430 PF02146 Sir2 family AF_RS08435 PF01142 tRNA pseudouridine synthase D (TruD) AF_RS08475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AF_RS08510 PF10576 Iron-sulfur binding domain of endonuclease III AF_RS08510 PF00730 HhH-GPD superfamily base excision DNA repair protein AF_RS08510 PF00633 Helix-hairpin-helix motif AF_RS08515 PF02769 AIR synthase related protein, C-terminal domain AF_RS08515 PF00586 AIR synthase related protein, N-terminal domain AF_RS08525 PF08546 Ketopantoate reductase PanE/ApbA C terminal AF_RS08525 PF02558 Ketopantoate reductase PanE/ApbA AF_RS08540 PF01161 Phosphatidylethanolamine-binding protein AF_RS08545 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AF_RS08555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AF_RS08555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AF_RS08560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS08570 PF02621 Menaquinone biosynthesis AF_RS08580 PF12697 Alpha/beta hydrolase family AF_RS08590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AF_RS08590 PF18766 SWI2/SNF2 ATPase AF_RS08590 PF11867 Domain of unknown function (DUF3387) AF_RS08600 PF01420 Type I restriction modification DNA specificity domain AF_RS08635 PF07859 alpha/beta hydrolase fold AF_RS08640 PF07849 Protein of unknown function (DUF1641) AF_RS08650 PF10369 Small subunit of acetolactate synthase AF_RS08655 PF00205 Thiamine pyrophosphate enzyme, central domain AF_RS08655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS08655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF_RS08660 PF00672 HAMP domain AF_RS08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS08660 PF00512 His Kinase A (phospho-acceptor) domain AF_RS08685 PF02735 Ku70/Ku80 beta-barrel domain AF_RS08690 PF00390 Malic enzyme, N-terminal domain AF_RS08690 PF03949 Malic enzyme, NAD binding domain AF_RS08695 PF13439 Glycosyltransferase Family 4 AF_RS08695 PF00534 Glycosyl transferases group 1 AF_RS08705 PF01416 tRNA pseudouridine synthase AF_RS08715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AF_RS08715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AF_RS08735 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AF_RS08740 PF03190 Protein of unknown function, DUF255 AF_RS08760 PF00156 Phosphoribosyl transferase domain AF_RS08770 PF01047 MarR family AF_RS08775 PF01066 CDP-alcohol phosphatidyltransferase AF_RS08785 PF00909 Ammonium Transporter Family AF_RS08790 PF00543 Nitrogen regulatory protein P-II AF_RS08795 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF_RS08795 PF00753 Metallo-beta-lactamase superfamily AF_RS08800 PF00909 Ammonium Transporter Family AF_RS08805 PF00543 Nitrogen regulatory protein P-II AF_RS08810 PF01676 Metalloenzyme superfamily AF_RS08810 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AF_RS08815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AF_RS08815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AF_RS08830 PF03591 AzlC protein AF_RS08860 PF00694 Aconitase C-terminal domain AF_RS08870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AF_RS08875 PF01026 TatD related DNase AF_RS08885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AF_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS08895 PF12911 N-terminal TM domain of oligopeptide transport permease C AF_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component AF_RS08900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF_RS08900 PF00005 ABC transporter AF_RS08905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF_RS08905 PF00005 ABC transporter AF_RS08910 PF00501 AMP-binding enzyme AF_RS08910 PF13193 AMP-binding enzyme C-terminal domain AF_RS08915 PF13183 4Fe-4S dicluster domain AF_RS08915 PF02754 Cysteine-rich domain AF_RS08920 PF13520 Amino acid permease AF_RS08935 PF01784 NIF3 (NGG1p interacting factor 3) AF_RS08940 PF04026 SpoVG AF_RS08945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF_RS08945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AF_RS08950 PF00205 Thiamine pyrophosphate enzyme, central domain AF_RS08950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS08950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF_RS08965 PF00398 Ribosomal RNA adenine dimethylase AF_RS08985 PF13464 Domain of unknown function (DUF4115) AF_RS08990 PF01048 Phosphorylase superfamily AF_RS09025 PF05343 M42 glutamyl aminopeptidase AF_RS09030 PF01380 SIS domain AF_RS09035 PF01895 PhoU domain AF_RS09040 PF01384 Phosphate transporter family AF_RS09055 PF00588 SpoU rRNA Methylase family AF_RS09060 PF11870 Domain of unknown function (DUF3390) AF_RS09060 PF13183 4Fe-4S dicluster domain AF_RS09060 PF02589 LUD domain AF_RS09065 PF11870 Domain of unknown function (DUF3390) AF_RS09065 PF02589 LUD domain AF_RS09065 PF13183 4Fe-4S dicluster domain AF_RS09085 PF01131 DNA topoisomerase AF_RS09085 PF01751 Toprim domain AF_RS09085 PF01396 Topoisomerase DNA binding C4 zinc finger AF_RS09105 PF02142 MGS-like domain AF_RS09105 PF01808 AICARFT/IMPCHase bienzyme AF_RS09125 PF01434 Peptidase family M41 AF_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS09125 PF17862 AAA+ lid domain AF_RS09135 PF00202 Aminotransferase class-III AF_RS09145 PF00440 Bacterial regulatory proteins, tetR family AF_RS09155 PF00005 ABC transporter AF_RS09185 PF00361 Proton-conducting membrane transporter AF_RS09185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AF_RS09190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AF_RS09190 PF00361 Proton-conducting membrane transporter AF_RS09195 PF00361 Proton-conducting membrane transporter AF_RS09205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AF_RS09210 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AF_RS09215 PF00146 NADH dehydrogenase AF_RS09250 PF03447 Homoserine dehydrogenase, NAD binding domain AF_RS09250 PF01958 Domain of unknown function DUF108 AF_RS09255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AF_RS09255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AF_RS09260 PF00557 Metallopeptidase family M24 AF_RS09265 PF00005 ABC transporter AF_RS09275 PF01891 Cobalt uptake substrate-specific transmembrane region AF_RS09275 PF13190 PDGLE domain AF_RS09300 PF03063 Prismane/CO dehydrogenase family AF_RS09325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AF_RS09325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AF_RS09330 PF13193 AMP-binding enzyme C-terminal domain AF_RS09330 PF00501 AMP-binding enzyme AF_RS09345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF_RS09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF_RS09430 PF09827 CRISPR associated protein Cas2 AF_RS09435 PF01930 Domain of unknown function DUF83 AF_RS09440 PF01867 CRISPR associated protein Cas1 AF_RS09455 PF01061 ABC-2 type transporter AF_RS09460 PF00005 ABC transporter AF_RS09475 PF00562 RNA polymerase Rpb2, domain 6 AF_RS09475 PF04560 RNA polymerase Rpb2, domain 7 AF_RS09475 PF04563 RNA polymerase beta subunit AF_RS09475 PF04561 RNA polymerase Rpb2, domain 2 AF_RS09475 PF04565 RNA polymerase Rpb2, domain 3 AF_RS09475 PF10385 RNA polymerase beta subunit external 1 domain AF_RS09480 PF04561 RNA polymerase Rpb2, domain 2 AF_RS09480 PF04563 RNA polymerase beta subunit AF_RS09480 PF04565 RNA polymerase Rpb2, domain 3 AF_RS09480 PF10385 RNA polymerase beta subunit external 1 domain AF_RS09480 PF00562 RNA polymerase Rpb2, domain 6 AF_RS09480 PF04560 RNA polymerase Rpb2, domain 7 AF_RS09485 PF04998 RNA polymerase Rpb1, domain 5 AF_RS09485 PF04983 RNA polymerase Rpb1, domain 3 AF_RS09485 PF00623 RNA polymerase Rpb1, domain 2 AF_RS09485 PF05000 RNA polymerase Rpb1, domain 4 AF_RS09485 PF04997 RNA polymerase Rpb1, domain 1 AF_RS09490 PF04983 RNA polymerase Rpb1, domain 3 AF_RS09490 PF04997 RNA polymerase Rpb1, domain 1 AF_RS09490 PF05000 RNA polymerase Rpb1, domain 4 AF_RS09490 PF00623 RNA polymerase Rpb1, domain 2 AF_RS09490 PF04998 RNA polymerase Rpb1, domain 5 AF_RS09495 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AF_RS09500 PF00575 S1 RNA binding domain AF_RS09500 PF08529 NusA N-terminal domain AF_RS09500 PF13184 NusA-like KH domain AF_RS09510 PF00177 Ribosomal protein S7p/S5e AF_RS09515 PF03764 Elongation factor G, domain IV AF_RS09515 PF00009 Elongation factor Tu GTP binding domain AF_RS09515 PF03144 Elongation factor Tu domain 2 AF_RS09515 PF14492 Elongation Factor G, domain II AF_RS09515 PF00679 Elongation factor G C-terminus AF_RS09525 PF03358 NADPH-dependent FMN reductase AF_RS09535 PF00072 Response regulator receiver domain AF_RS09540 PF01807 CHC2 zinc finger AF_RS09540 PF08275 DNA primase catalytic core, N-terminal domain AF_RS09540 PF13662 Toprim domain AF_RS09545 PF02224 Cytidylate kinase AF_RS09555 PF00344 SecY translocase AF_RS09560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AF_RS09570 PF00333 Ribosomal protein S5, N-terminal domain AF_RS09570 PF03719 Ribosomal protein S5, C-terminal domain AF_RS09575 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AF_RS09590 PF00347 Ribosomal protein L6 AF_RS09595 PF00410 Ribosomal protein S8 AF_RS09605 PF00673 ribosomal L5P family C-terminus AF_RS09605 PF00281 Ribosomal protein L5 AF_RS09615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AF_RS09615 PF00467 KOW motif AF_RS09620 PF00238 Ribosomal protein L14p/L23e AF_RS09625 PF00366 Ribosomal protein S17 AF_RS09635 PF00831 Ribosomal L29 protein AF_RS09640 PF07650 KH domain AF_RS09640 PF00189 Ribosomal protein S3, C-terminal domain AF_RS09645 PF00237 Ribosomal protein L22p/L17e AF_RS09650 PF00203 Ribosomal protein S19 AF_RS09655 PF00181 Ribosomal Proteins L2, RNA binding domain AF_RS09655 PF03947 Ribosomal Proteins L2, C-terminal domain AF_RS09660 PF00276 Ribosomal protein L23 AF_RS09665 PF00573 Ribosomal protein L4/L1 family AF_RS09670 PF00297 Ribosomal protein L3 AF_RS09695 PF07969 Amidohydrolase family AF_RS09705 PF13193 AMP-binding enzyme C-terminal domain AF_RS09705 PF00501 AMP-binding enzyme AF_RS09720 PF02289 Cyclohydrolase (MCH) AF_RS09725 PF08745 PINc domain ribonuclease AF_RS09730 PF10609 NUBPL iron-transfer P-loop NTPase AF_RS09735 PF13607 Succinyl-CoA ligase like flavodoxin domain AF_RS09735 PF13380 CoA binding domain AF_RS09735 PF00583 Acetyltransferase (GNAT) family AF_RS09740 PF00586 AIR synthase related protein, N-terminal domain AF_RS09740 PF02769 AIR synthase related protein, C-terminal domain AF_RS09740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AF_RS09745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AF_RS09790 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AF_RS09790 PF01502 Phosphoribosyl-AMP cyclohydrolase AF_RS09795 PF01938 TRAM domain AF_RS09810 PF01425 Amidase AF_RS09815 PF01409 tRNA synthetases class II core domain (F) AF_RS09825 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AF_RS09830 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AF_RS09835 PF01869 BadF/BadG/BcrA/BcrD ATPase family AF_RS09840 PF00625 Guanylate kinase AF_RS09860 PF00330 Aconitase family (aconitate hydratase) AF_RS09885 PF00480 ROK family AF_RS09885 PF01325 Iron dependent repressor, N-terminal DNA binding domain AF_RS09890 PF01871 AMMECR1 AF_RS09900 PF00011 Hsp20/alpha crystallin family AF_RS09910 PF05958 tRNA (Uracil-5-)-methyltransferase AF_RS09910 PF01938 TRAM domain AF_RS09915 PF00490 Delta-aminolevulinic acid dehydratase AF_RS09920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AF_RS09920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AF_RS09920 PF01488 Shikimate / quinate 5-dehydrogenase AF_RS09925 PF17862 AAA+ lid domain AF_RS09925 PF06480 FtsH Extracellular AF_RS09925 PF01434 Peptidase family M41 AF_RS09925 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS09945 PF01578 Cytochrome C assembly protein AF_RS09950 PF00950 ABC 3 transport family AF_RS09955 PF00005 ABC transporter AF_RS09960 PF01297 Zinc-uptake complex component A periplasmic AF_RS09970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AF_RS09970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AF_RS10005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AF_RS10035 PF00209 Sodium:neurotransmitter symporter family AF_RS10050 PF13183 4Fe-4S dicluster domain AF_RS10050 PF02754 Cysteine-rich domain AF_RS10060 PF05221 S-adenosyl-L-homocysteine hydrolase AF_RS10060 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AF_RS10070 PF00155 Aminotransferase class I and II AF_RS10075 PF00282 Pyridoxal-dependent decarboxylase conserved domain AF_RS10080 PF12804 MobA-like NTP transferase domain AF_RS10085 PF04055 Radical SAM superfamily AF_RS10085 PF06463 Molybdenum Cofactor Synthesis C AF_RS10090 PF01872 RibD C-terminal domain AF_RS10090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AF_RS10100 PF13186 Iron-sulfur cluster-binding domain AF_RS10100 PF04055 Radical SAM superfamily AF_RS10125 PF14535 AMP-binding enzyme C-terminal domain AF_RS10125 PF00501 AMP-binding enzyme AF_RS10130 PF07690 Major Facilitator Superfamily AF_RS10135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF_RS10135 PF00205 Thiamine pyrophosphate enzyme, central domain AF_RS10135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS10140 PF16363 GDP-mannose 4,6 dehydratase AF_RS10145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS10145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS10145 PF00378 Enoyl-CoA hydratase/isomerase AF_RS10155 PF00465 Iron-containing alcohol dehydrogenase AF_RS10180 PF00155 Aminotransferase class I and II AF_RS10220 PF00512 His Kinase A (phospho-acceptor) domain AF_RS10220 PF13188 PAS domain AF_RS10220 PF13426 PAS domain AF_RS10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS10220 PF00989 PAS fold AF_RS10225 PF13193 AMP-binding enzyme C-terminal domain AF_RS10225 PF00501 AMP-binding enzyme AF_RS10230 PF00557 Metallopeptidase family M24 AF_RS10230 PF01321 Creatinase/Prolidase N-terminal domain AF_RS10235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF_RS10235 PF02403 Seryl-tRNA synthetase N-terminal domain AF_RS10240 PF01040 UbiA prenyltransferase family AF_RS10245 PF01008 Initiation factor 2 subunit family AF_RS10250 PF05670 NFACT protein RNA binding domain AF_RS10255 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AF_RS10255 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AF_RS10255 PF01189 16S rRNA methyltransferase RsmB/F AF_RS10275 PF00696 Amino acid kinase family AF_RS10285 PF01066 CDP-alcohol phosphatidyltransferase AF_RS10290 PF02666 Phosphatidylserine decarboxylase AF_RS10300 PF00303 Thymidylate synthase AF_RS10315 PF01894 Uncharacterised protein family UPF0047 AF_RS10320 PF01728 FtsJ-like methyltransferase AF_RS10325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS10330 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AF_RS10330 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AF_RS10345 PF02416 mttA/Hcf106 family AF_RS10350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS10350 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS10350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS10365 PF17864 RuvB AAA lid domain AF_RS10365 PF05491 RuvB C-terminal winged helix domain AF_RS10365 PF05496 Holliday junction DNA helicase RuvB P-loop domain AF_RS10375 PF02881 SRP54-type protein, helical bundle domain AF_RS10375 PF00448 SRP54-type protein, GTPase domain AF_RS10420 PF02774 Semialdehyde dehydrogenase, dimerisation domain AF_RS10420 PF01118 Semialdehyde dehydrogenase, NAD binding domain AF_RS10430 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase AF_RS10430 PF02741 FTR, proximal lobe AF_RS10435 PF02581 Thiamine monophosphate synthase AF_RS10440 PF02110 Hydroxyethylthiazole kinase family AF_RS10480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AF_RS10485 PF00364 Biotin-requiring enzyme AF_RS10485 PF00682 HMGL-like AF_RS10485 PF02436 Conserved carboxylase domain AF_RS10505 PF00288 GHMP kinases N terminal domain AF_RS10505 PF08544 GHMP kinases C terminal AF_RS10555 PF01969 Protein of unknown function DUF111 AF_RS10560 PF00004 ATPase family associated with various cellular activities (AAA) AF_RS10560 PF17862 AAA+ lid domain AF_RS10560 PF06480 FtsH Extracellular AF_RS10560 PF01434 Peptidase family M41 AF_RS10565 PF13378 Enolase C-terminal domain-like AF_RS10565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AF_RS10570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF_RS10570 PF00205 Thiamine pyrophosphate enzyme, central domain AF_RS10570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF_RS10575 PF00107 Zinc-binding dehydrogenase AF_RS10575 PF08240 Alcohol dehydrogenase GroES-like domain AF_RS10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS10615 PF00989 PAS fold AF_RS10615 PF17203 Single cache domain 3 AF_RS10615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AF_RS10625 PF01914 MarC family integral membrane protein AF_RS10650 PF02934 GatB/GatE catalytic domain AF_RS10650 PF02637 GatB domain AF_RS10660 PF00291 Pyridoxal-phosphate dependent enzyme AF_RS10660 PF00571 CBS domain AF_RS10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AF_RS10710 PF03466 LysR substrate binding domain AF_RS10715 PF00885 6,7-dimethyl-8-ribityllumazine synthase AF_RS10720 PF00155 Aminotransferase class I and II AF_RS10755 PF16916 Dimerisation domain of Zinc Transporter AF_RS10755 PF01545 Cation efflux family AF_RS10785 PF00085 Thioredoxin AF_RS10795 PF01018 GTP1/OBG AF_RS10795 PF01926 50S ribosome-binding GTPase AF_RS10805 PF00753 Metallo-beta-lactamase superfamily AF_RS10805 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF_RS10815 PF01967 MoaC family AF_RS10820 PF00857 Isochorismatase family AF_RS10830 PF12706 Beta-lactamase superfamily domain AF_RS10840 PF00753 Metallo-beta-lactamase superfamily AF_RS10840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AF_RS10840 PF10996 Beta-Casp domain AF_RS10850 PF02834 LigT like Phosphoesterase AF_RS10930 PF03060 Nitronate monooxygenase AF_RS10950 PF02926 THUMP domain AF_RS10950 PF10672 S-adenosylmethionine-dependent methyltransferase AF_RS10950 PF01170 Putative RNA methylase family UPF0020 AF_RS10955 PF02391 MoaE protein AF_RS10980 PF01479 S4 domain AF_RS10980 PF00163 Ribosomal protein S4/S9 N-terminal domain AF_RS10985 PF02629 CoA binding domain AF_RS10985 PF00549 CoA-ligase AF_RS10990 PF00549 CoA-ligase AF_RS10990 PF08442 ATP-grasp domain AF_RS11045 PF01916 Deoxyhypusine synthase AF_RS11050 PF04476 4-HFC-P synthase AF_RS11065 PF00330 Aconitase family (aconitate hydratase) AF_RS11070 PF00293 NUDIX domain AF_RS11105 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase AF_RS11105 PF02741 FTR, proximal lobe AF_RS11110 PF03070 TENA/THI-4/PQQC family AF_RS11110 PF08543 Phosphomethylpyrimidine kinase AF_RS11110 PF02581 Thiamine monophosphate synthase AF_RS11125 PF01230 HIT domain AF_RS11150 PF02310 B12 binding domain AF_RS11150 PF01642 Methylmalonyl-CoA mutase AF_RS11155 PF00682 HMGL-like AF_RS11155 PF00364 Biotin-requiring enzyme AF_RS11155 PF02436 Conserved carboxylase domain AF_RS11160 PF01039 Carboxyl transferase domain AF_RS11170 PF02310 B12 binding domain AF_RS11170 PF01642 Methylmalonyl-CoA mutase AF_RS11195 PF08264 Anticodon-binding domain of tRNA AF_RS11195 PF00133 tRNA synthetases class I (I, L, M and V) AF_RS11200 PF01557 Fumarylacetoacetate (FAA) hydrolase family AF_RS11205 PF02926 THUMP domain AF_RS11205 PF02568 Thiamine biosynthesis protein (ThiI) AF_RS11220 PF04358 DsrC like protein AF_RS11225 PF07685 CobB/CobQ-like glutamine amidotransferase domain AF_RS11225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AF_RS11240 PF01475 Ferric uptake regulator family AF_RS11245 PF00141 Peroxidase AF_RS11265 PF01725 Ham1 family AF_RS11270 PF00118 TCP-1/cpn60 chaperonin family AF_RS11290 PF00206 Lyase AF_RS11290 PF10397 Adenylosuccinate lyase C-terminus AF_RS11295 PF00108 Thiolase, N-terminal domain AF_RS11295 PF02803 Thiolase, C-terminal domain AF_RS11300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS11300 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS11300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS11330 PF00072 Response regulator receiver domain AF_RS11335 PF01979 Amidohydrolase family AF_RS11340 PF02464 Competence-damaged protein AF_RS11340 PF00994 Probable molybdopterin binding domain AF_RS11340 PF18146 Damage-inducible protein CinA KH domain AF_RS11345 PF00764 Arginosuccinate synthase AF_RS11350 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AF_RS11355 PF00270 DEAD/DEAH box helicase AF_RS11355 PF00271 Helicase conserved C-terminal domain AF_RS11360 PF01411 tRNA synthetases class II (A) AF_RS11360 PF02272 DHHA1 domain AF_RS11360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AF_RS11365 PF01996 F420-0:Gamma-glutamyl ligase AF_RS11365 PF00881 Nitroreductase family AF_RS11370 PF01820 D-ala D-ala ligase N-terminus AF_RS11370 PF07478 D-ala D-ala ligase C-terminus AF_RS11380 PF07690 Major Facilitator Superfamily AF_RS11415 PF03061 Thioesterase superfamily AF_RS11420 PF00117 Glutamine amidotransferase class-I AF_RS11425 PF00753 Metallo-beta-lactamase superfamily AF_RS11425 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF_RS11430 PF00881 Nitroreductase family AF_RS11440 PF10609 NUBPL iron-transfer P-loop NTPase AF_RS11460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF_RS11460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF_RS11465 PF02770 Acyl-CoA dehydrogenase, middle domain AF_RS11465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF_RS11465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF_RS11475 PF03167 Uracil DNA glycosylase superfamily AF_RS11495 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AF_RS11495 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AF_RS11505 PF00411 Ribosomal protein S11 AF_RS11510 PF01479 S4 domain AF_RS11510 PF00163 Ribosomal protein S4/S9 N-terminal domain AF_RS11515 PF00416 Ribosomal protein S13/S18 AF_RS11520 PF00348 Polyprenyl synthetase AF_RS11525 PF01070 FMN-dependent dehydrogenase AF_RS11530 PF00696 Amino acid kinase family AF_RS11535 PF00288 GHMP kinases N terminal domain AF_RS11535 PF08544 GHMP kinases C terminal AF_RS11535 PF10509 Galactokinase galactose-binding signature AF_RS11540 PF00850 Histone deacetylase domain AF_RS11565 PF00282 Pyridoxal-dependent decarboxylase conserved domain AF_RS11585 PF01066 CDP-alcohol phosphatidyltransferase AF_RS11585 PF00483 Nucleotidyl transferase AF_RS11590 PF01916 Deoxyhypusine synthase AF_RS11595 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AF_RS11605 PF18030 RimK PreATP-grasp domain AF_RS11605 PF08443 RimK-like ATP-grasp domain AF_RS11640 PF01875 Memo-like protein AF_RS11655 PF01575 MaoC like domain AF_RS11655 PF00171 Aldehyde dehydrogenase family AF_RS11660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AF_RS11660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AF_RS11665 PF00293 NUDIX domain AF_RS11665 PF01467 Cytidylyltransferase-like AF_RS11670 PF06463 Molybdenum Cofactor Synthesis C AF_RS11670 PF04055 Radical SAM superfamily AF_RS11705 PF02654 Cobalamin-5-phosphate synthase AF_RS11710 PF01189 16S rRNA methyltransferase RsmB/F AF_RS11710 PF01029 NusB family AF_RS11725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AF_RS11725 PF01488 Shikimate / quinate 5-dehydrogenase AF_RS11725 PF08501 Shikimate dehydrogenase substrate binding domain AF_RS11730 PF02686 Glu-tRNAGln amidotransferase C subunit AF_RS11735 PF01425 Amidase AF_RS11760 PF17284 Spermidine synthase tetramerisation domain AF_RS11770 PF00364 Biotin-requiring enzyme AF_RS11770 PF00561 alpha/beta hydrolase fold AF_RS11840 PF00176 SNF2 family N-terminal domain AF_RS11840 PF00271 Helicase conserved C-terminal domain AF_RS11910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AF_RS11910 PF00586 AIR synthase related protein, N-terminal domain AF_RS11910 PF02769 AIR synthase related protein, C-terminal domain AF_RS11915 PF00005 ABC transporter AF_RS11920 PF01458 Uncharacterized protein family (UPF0051) AF_RS11925 PF00155 Aminotransferase class I and II AF_RS11930 PF00583 Acetyltransferase (GNAT) family AF_RS11935 PF00501 AMP-binding enzyme AF_RS11935 PF13193 AMP-binding enzyme C-terminal domain AF_RS11960 PF00459 Inositol monophosphatase family AF_RS11965 PF01513 ATP-NAD kinase AF_RS12000 PF10609 NUBPL iron-transfer P-loop NTPase AF_RS12010 PF10609 NUBPL iron-transfer P-loop NTPase AF_RS12020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AF_RS12020 PF01568 Molydopterin dinucleotide binding domain AF_RS12020 PF00384 Molybdopterin oxidoreductase AF_RS12025 PF13247 4Fe-4S dicluster domain AF_RS12040 PF16916 Dimerisation domain of Zinc Transporter AF_RS12040 PF01545 Cation efflux family AF_RS12055 PF13193 AMP-binding enzyme C-terminal domain AF_RS12055 PF16177 Acetyl-coenzyme A synthetase N-terminus AF_RS12055 PF00501 AMP-binding enzyme AF_RS12075 PF07670 Nucleoside recognition AF_RS12075 PF02421 Ferrous iron transport protein B AF_RS12075 PF07664 Ferrous iron transport protein B C terminus AF_RS12075 PF17910 FeoB cytosolic helical domain AF_RS12080 PF02742 Iron dependent repressor, metal binding and dimerisation domain AF_RS12080 PF01325 Iron dependent repressor, N-terminal DNA binding domain AF_RS12100 PF00588 SpoU rRNA Methylase family AF_RS12100 PF08032 RNA 2'-O ribose methyltransferase substrate binding AF_RS12115 PF00583 Acetyltransferase (GNAT) family AF_RS12115 PF16199 Radical_SAM C-terminal domain AF_RS12115 PF04055 Radical SAM superfamily AF_RS12135 PF00271 Helicase conserved C-terminal domain AF_RS12135 PF09369 Domain of unknown function (DUF1998) AF_RS12135 PF00270 DEAD/DEAH box helicase AF_RS12140 PF00753 Metallo-beta-lactamase superfamily AF_RS12150 PF08331 Domain of unknown function (DUF1730) AF_RS12160 PF00296 Luciferase-like monooxygenase AF_RS12165 PF01964 Radical SAM ThiC family AF_RS12170 PF04055 Radical SAM superfamily AF_RS12170 PF13186 Iron-sulfur cluster-binding domain AF_RS12200 PF00072 Response regulator receiver domain AF_RS12210 PF08264 Anticodon-binding domain of tRNA AF_RS12210 PF13603 Leucyl-tRNA synthetase, Domain 2 AF_RS12210 PF00133 tRNA synthetases class I (I, L, M and V) AF_RS12210 PF09334 tRNA synthetases class I (M) AF_RS12230 PF07726 ATPase family associated with various cellular activities (AAA) AF_RS12230 PF17863 AAA lid domain AF_RS12250 PF00378 Enoyl-CoA hydratase/isomerase AF_RS12260 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AF_RS12275 PF09827 CRISPR associated protein Cas2 AF_RS12280 PF01867 CRISPR associated protein Cas1 AF_RS12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS12320 PF00512 His Kinase A (phospho-acceptor) domain AF_RS12320 PF00672 HAMP domain AF_RS12325 PF12706 Beta-lactamase superfamily domain AF_RS12340 PF00535 Glycosyl transferase family 2 AF_RS12365 PF13193 AMP-binding enzyme C-terminal domain AF_RS12365 PF00501 AMP-binding enzyme AF_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS12380 PF00512 His Kinase A (phospho-acceptor) domain AF_RS12380 PF13426 PAS domain AF_RS12380 PF13188 PAS domain AF_RS12380 PF00989 PAS fold AF_RS12385 PF13458 Periplasmic binding protein AF_RS12395 PF01978 Sugar-specific transcriptional regulator TrmB AF_RS12395 PF11495 Archaeal transcriptional regulator TrmB AF_RS12415 PF00072 Response regulator receiver domain AF_RS12415 PF01627 Hpt domain AF_RS12415 PF00512 His Kinase A (phospho-acceptor) domain AF_RS12415 PF00672 HAMP domain AF_RS12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS12415 PF17149 Periplasmic sensor domain found in signal transduction proteins AF_RS12465 PF01022 Bacterial regulatory protein, arsR family AF_RS12470 PF01578 Cytochrome C assembly protein AF_RS12470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AF_RS12495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF_RS12495 PF13188 PAS domain AF_RS12495 PF00989 PAS fold AF_RS12495 PF00512 His Kinase A (phospho-acceptor) domain AF_RS12495 PF13426 PAS domain AF_RS12585 PF01980 tRNA-methyltransferase O AF_RS12600 PF01209 ubiE/COQ5 methyltransferase family AF_RS12620 PF02001 Protein of unknown function DUF134 AF_RS12710 PF06745 KaiC AF_RS12790 PF13358 DDE superfamily endonuclease