locus-tag class description ABIV_RS00005 PF00308 Bacterial dnaA protein ABIV_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ABIV_RS00005 PF11638 DnaA N-terminal domain ABIV_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ABIV_RS00010 PF02767 DNA polymerase III beta subunit, central domain ABIV_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ABIV_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ABIV_RS00015 PF00204 DNA gyrase B ABIV_RS00015 PF01751 Toprim domain ABIV_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00030 PF02535 ZIP Zinc transporter ABIV_RS00035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABIV_RS00035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABIV_RS00040 PF01810 LysE type translocator ABIV_RS00045 PF12833 Helix-turn-helix domain ABIV_RS00065 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS00070 PF14489 QueF-like protein ABIV_RS00090 PF09335 SNARE associated Golgi protein ABIV_RS00095 PF00440 Bacterial regulatory proteins, tetR family ABIV_RS00095 PF08359 YsiA-like protein, C-terminal region ABIV_RS00100 PF00873 AcrB/AcrD/AcrF family ABIV_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABIV_RS00120 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00120 PF08447 PAS fold ABIV_RS00120 PF00989 PAS fold ABIV_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00125 PF00356 Bacterial regulatory proteins, lacI family ABIV_RS00130 PF13188 PAS domain ABIV_RS00130 PF00072 Response regulator receiver domain ABIV_RS00130 PF08448 PAS fold ABIV_RS00130 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00135 PF00849 RNA pseudouridylate synthase ABIV_RS00140 PF10397 Adenylosuccinate lyase C-terminus ABIV_RS00140 PF00206 Lyase ABIV_RS00145 PF03477 ATP cone domain ABIV_RS00145 PF00317 Ribonucleotide reductase, all-alpha domain ABIV_RS00145 PF02867 Ribonucleotide reductase, barrel domain ABIV_RS00150 PF00268 Ribonucleotide reductase, small chain ABIV_RS00160 PF03707 Bacterial signalling protein N terminal repeat ABIV_RS00160 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS00160 PF00563 EAL domain ABIV_RS00170 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00170 PF00072 Response regulator receiver domain ABIV_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABIV_RS00195 PF00873 AcrB/AcrD/AcrF family ABIV_RS00200 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABIV_RS00205 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABIV_RS00210 PF04055 Radical SAM superfamily ABIV_RS00225 PF00977 Histidine biosynthesis protein ABIV_RS00230 PF00398 Ribosomal RNA adenine dimethylase ABIV_RS00235 PF00753 Metallo-beta-lactamase superfamily ABIV_RS00235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABIV_RS00235 PF17770 Ribonuclease J C-terminal domain ABIV_RS00240 PF01380 SIS domain ABIV_RS00240 PF00571 CBS domain ABIV_RS00245 PF01479 S4 domain ABIV_RS00245 PF00849 RNA pseudouridylate synthase ABIV_RS00250 PF12002 MgsA AAA+ ATPase C terminal ABIV_RS00250 PF16193 AAA C-terminal domain ABIV_RS00250 PF01661 Macro domain ABIV_RS00250 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABIV_RS00255 PF03653 Uncharacterised protein family (UPF0093) ABIV_RS00260 PF13638 PIN domain ABIV_RS00260 PF02562 PhoH-like protein ABIV_RS00265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABIV_RS00265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABIV_RS00275 PF00890 FAD binding domain ABIV_RS00275 PF02910 Fumarate reductase flavoprotein C-term ABIV_RS00280 PF13085 2Fe-2S iron-sulfur cluster binding domain ABIV_RS00285 PF03480 Bacterial extracellular solute-binding protein, family 7 ABIV_RS00300 PF13537 Glutamine amidotransferase domain ABIV_RS00300 PF00733 Asparagine synthase ABIV_RS00310 PF01384 Phosphate transporter family ABIV_RS00320 PF00270 DEAD/DEAH box helicase ABIV_RS00320 PF00271 Helicase conserved C-terminal domain ABIV_RS00325 PF00289 Biotin carboxylase, N-terminal domain ABIV_RS00325 PF02785 Biotin carboxylase C-terminal domain ABIV_RS00325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABIV_RS00330 PF00364 Biotin-requiring enzyme ABIV_RS00345 PF02754 Cysteine-rich domain ABIV_RS00350 PF11870 Domain of unknown function (DUF3390) ABIV_RS00350 PF13183 4Fe-4S dicluster domain ABIV_RS00350 PF02589 LUD domain ABIV_RS00355 PF02589 LUD domain ABIV_RS00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00360 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00360 PF08448 PAS fold ABIV_RS00360 PF13188 PAS domain ABIV_RS00360 PF00072 Response regulator receiver domain ABIV_RS00365 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00365 PF00072 Response regulator receiver domain ABIV_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 ABIV_RS00380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABIV_RS00385 PF01565 FAD binding domain ABIV_RS00385 PF02913 FAD linked oxidases, C-terminal domain ABIV_RS00390 PF09312 SurA N-terminal domain ABIV_RS00390 PF00639 PPIC-type PPIASE domain ABIV_RS00395 PF02637 GatB domain ABIV_RS00395 PF02934 GatB/GatE catalytic domain ABIV_RS00400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABIV_RS00400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABIV_RS00405 PF03649 Uncharacterised protein family (UPF0014) ABIV_RS00415 PF01638 HxlR-like helix-turn-helix ABIV_RS00420 PF08240 Alcohol dehydrogenase GroES-like domain ABIV_RS00420 PF00107 Zinc-binding dehydrogenase ABIV_RS00425 PF01638 HxlR-like helix-turn-helix ABIV_RS00430 PF00085 Thioredoxin ABIV_RS00435 PF00171 Aldehyde dehydrogenase family ABIV_RS00445 PF01810 LysE type translocator ABIV_RS00450 PF12801 4Fe-4S binding domain ABIV_RS00450 PF13746 4Fe-4S dicluster domain ABIV_RS00450 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABIV_RS00455 PF08447 PAS fold ABIV_RS00455 PF00989 PAS fold ABIV_RS00455 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00460 PF00072 Response regulator receiver domain ABIV_RS00460 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABIV_RS00465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABIV_RS00465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABIV_RS00465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABIV_RS00475 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABIV_RS00490 PF08443 RimK-like ATP-grasp domain ABIV_RS00490 PF18030 RimK PreATP-grasp domain ABIV_RS00510 PF00318 Ribosomal protein S2 ABIV_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00530 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00530 PF00072 Response regulator receiver domain ABIV_RS00535 PF04264 YceI-like domain ABIV_RS00545 PF05114 Protein of unknown function (DUF692) ABIV_RS00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00555 PF00072 Response regulator receiver domain ABIV_RS00555 PF13426 PAS domain ABIV_RS00555 PF08448 PAS fold ABIV_RS00555 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00560 PF00072 Response regulator receiver domain ABIV_RS00560 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00575 PF01554 MatE ABIV_RS00580 PF00742 Homoserine dehydrogenase ABIV_RS00580 PF01842 ACT domain ABIV_RS00580 PF03447 Homoserine dehydrogenase, NAD binding domain ABIV_RS00585 PF00155 Aminotransferase class I and II ABIV_RS00595 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABIV_RS00595 PF00588 SpoU rRNA Methylase family ABIV_RS00600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS00605 PF01197 Ribosomal protein L31 ABIV_RS00615 PF00583 Acetyltransferase (GNAT) family ABIV_RS00615 PF00795 Carbon-nitrogen hydrolase ABIV_RS00620 PF01040 UbiA prenyltransferase family ABIV_RS00625 PF17156 Gammaproteobacterial periplasmic sensor domain ABIV_RS00625 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS00630 PF00924 Mechanosensitive ion channel ABIV_RS00640 PF00672 HAMP domain ABIV_RS00640 PF02203 Tar ligand binding domain homologue ABIV_RS00640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS00645 PF08447 PAS fold ABIV_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00645 PF08448 PAS fold ABIV_RS00650 PF02203 Tar ligand binding domain homologue ABIV_RS00650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS00650 PF00672 HAMP domain ABIV_RS00655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS00655 PF08447 PAS fold ABIV_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00660 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00670 PF02222 ATP-grasp domain ABIV_RS00680 PF01678 Diaminopimelate epimerase ABIV_RS00685 PF01121 Dephospho-CoA kinase ABIV_RS00690 PF17284 Spermidine synthase tetramerisation domain ABIV_RS00695 PF00586 AIR synthase related protein, N-terminal domain ABIV_RS00695 PF02769 AIR synthase related protein, C-terminal domain ABIV_RS00700 PF02678 Pirin ABIV_RS00700 PF17954 Quercetinase C-terminal cupin domain ABIV_RS00710 PF04264 YceI-like domain ABIV_RS00720 PF01810 LysE type translocator ABIV_RS00730 PF00266 Aminotransferase class-V ABIV_RS00735 PF13393 Histidyl-tRNA synthetase ABIV_RS00740 PF00709 Adenylosuccinate synthetase ABIV_RS00750 PF00117 Glutamine amidotransferase class-I ABIV_RS00750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABIV_RS00770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABIV_RS00770 PF02542 YgbB family ABIV_RS00785 PF01964 Radical SAM ThiC family ABIV_RS00790 PF01883 Iron-sulfur cluster assembly protein ABIV_RS00790 PF10609 NUBPL iron-transfer P-loop NTPase ABIV_RS00795 PF02525 Flavodoxin-like fold ABIV_RS00805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABIV_RS00805 PF01502 Phosphoribosyl-AMP cyclohydrolase ABIV_RS00820 PF01063 Amino-transferase class IV ABIV_RS00830 PF02574 Homocysteine S-methyltransferase ABIV_RS00830 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABIV_RS00830 PF02607 B12 binding domain ABIV_RS00830 PF02310 B12 binding domain ABIV_RS00830 PF00809 Pterin binding enzyme ABIV_RS00845 PF02664 S-Ribosylhomocysteinase (LuxS) ABIV_RS00850 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABIV_RS00850 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABIV_RS00850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABIV_RS00850 PF10371 Domain of unknown function ABIV_RS00850 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABIV_RS00855 PF13419 Haloacid dehalogenase-like hydrolase ABIV_RS00860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABIV_RS00865 PF00380 Ribosomal protein S9/S16 ABIV_RS00870 PF00572 Ribosomal protein L13 ABIV_RS00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS00875 PF00672 HAMP domain ABIV_RS00875 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS00880 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS00880 PF00072 Response regulator receiver domain ABIV_RS00890 PF01895 PhoU domain ABIV_RS00895 PF00005 ABC transporter ABIV_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS00905 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS00915 PF12792 CSS motif domain associated with EAL ABIV_RS00915 PF00563 EAL domain ABIV_RS00925 PF03462 PCRF domain ABIV_RS00925 PF00472 RF-1 domain ABIV_RS00930 PF01649 Ribosomal protein S20 ABIV_RS00935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABIV_RS00935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABIV_RS00935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABIV_RS00935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABIV_RS00940 PF01252 Signal peptidase (SPase) II ABIV_RS00945 PF00330 Aconitase family (aconitate hydratase) ABIV_RS00950 PF12804 MobA-like NTP transferase domain ABIV_RS00955 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS00975 PF00453 Ribosomal protein L20 ABIV_RS00980 PF01632 Ribosomal protein L35 ABIV_RS00985 PF05198 Translation initiation factor IF-3, N-terminal domain ABIV_RS00985 PF00707 Translation initiation factor IF-3, C-terminal domain ABIV_RS00990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABIV_RS00990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABIV_RS00990 PF03129 Anticodon binding domain ABIV_RS01020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABIV_RS01020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABIV_RS01040 PF02801 Beta-ketoacyl synthase, C-terminal domain ABIV_RS01040 PF00109 Beta-ketoacyl synthase, N-terminal domain ABIV_RS01055 PF00005 ABC transporter ABIV_RS01090 PF00221 Aromatic amino acid lyase ABIV_RS01110 PF00550 Phosphopantetheine attachment site ABIV_RS01115 PF00109 Beta-ketoacyl synthase, N-terminal domain ABIV_RS01115 PF02801 Beta-ketoacyl synthase, C-terminal domain ABIV_RS01135 PF13288 DXP reductoisomerase C-terminal domain ABIV_RS01135 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABIV_RS01135 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABIV_RS01155 PF00814 Glycoprotease family ABIV_RS01165 PF03853 YjeF-related protein N-terminus ABIV_RS01165 PF01256 Carbohydrate kinase ABIV_RS01170 PF03091 CutA1 divalent ion tolerance protein ABIV_RS01175 PF05690 Thiazole biosynthesis protein ThiG ABIV_RS01220 PF04829 Pre-toxin domain with VENN motif ABIV_RS01220 PF05860 haemagglutination activity domain ABIV_RS01220 PF15526 Novel toxin 21 ABIV_RS01220 PF15526 Novel toxin 21 ABIV_RS01220 PF13332 Hemagglutinin repeat ABIV_RS01220 PF13332 Hemagglutinin repeat ABIV_RS01220 PF04829 Pre-toxin domain with VENN motif ABIV_RS01220 PF05594 Haemagluttinin repeat ABIV_RS01220 PF05860 haemagglutination activity domain ABIV_RS01220 PF05594 Haemagluttinin repeat ABIV_RS01230 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABIV_RS01230 PF08479 POTRA domain, ShlB-type ABIV_RS01230 PF17287 POTRA domain ABIV_RS01235 PF03861 ANTAR domain ABIV_RS01235 PF00072 Response regulator receiver domain ABIV_RS01245 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS01245 PF00072 Response regulator receiver domain ABIV_RS01255 PF00072 Response regulator receiver domain ABIV_RS01255 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS01260 PF12282 Signal transduction histidine kinase ABIV_RS01260 PF07568 Histidine kinase ABIV_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS01275 PF13488 Glycine zipper ABIV_RS01275 PF00691 OmpA family ABIV_RS01280 PF11799 impB/mucB/samB family C-terminal domain ABIV_RS01280 PF00817 impB/mucB/samB family ABIV_RS01285 PF02021 Uncharacterised protein family UPF0102 ABIV_RS01295 PF00672 HAMP domain ABIV_RS01295 PF17200 Single Cache domain 2 ABIV_RS01295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS01305 PF00391 PEP-utilising enzyme, mobile domain ABIV_RS01305 PF02887 Pyruvate kinase, alpha/beta domain ABIV_RS01305 PF00224 Pyruvate kinase, barrel domain ABIV_RS01315 PF00202 Aminotransferase class-III ABIV_RS01325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABIV_RS01325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABIV_RS01330 PF00425 chorismate binding enzyme ABIV_RS01340 PF01063 Amino-transferase class IV ABIV_RS01350 PF03591 AzlC protein ABIV_RS01355 PF05437 Branched-chain amino acid transport protein (AzlD) ABIV_RS01360 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS01360 PF00072 Response regulator receiver domain ABIV_RS01365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABIV_RS01365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABIV_RS01370 PF02504 Fatty acid synthesis protein ABIV_RS01375 PF01783 Ribosomal L32p protein family ABIV_RS01385 PF00334 Nucleoside diphosphate kinase ABIV_RS01395 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABIV_RS01395 PF00578 AhpC/TSA family ABIV_RS01400 PF07497 Rho termination factor, RNA-binding domain ABIV_RS01400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABIV_RS01400 PF07498 Rho termination factor, N-terminal domain ABIV_RS01405 PF00005 ABC transporter ABIV_RS01405 PF09383 NIL domain ABIV_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS01415 PF03180 NLPA lipoprotein ABIV_RS01425 PF01177 Asp/Glu/Hydantoin racemase ABIV_RS01430 PF12169 DNA polymerase III subunits gamma and tau domain III ABIV_RS01430 PF12170 DNA polymerase III tau subunit V interacting with alpha ABIV_RS01445 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABIV_RS01445 PF03900 Porphobilinogen deaminase, C-terminal domain ABIV_RS01450 PF00857 Isochorismatase family ABIV_RS01455 PF13407 Periplasmic binding protein domain ABIV_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS01460 PF00072 Response regulator receiver domain ABIV_RS01460 PF13426 PAS domain ABIV_RS01470 PF04303 PrpF protein ABIV_RS01475 PF00330 Aconitase family (aconitate hydratase) ABIV_RS01475 PF00694 Aconitase C-terminal domain ABIV_RS01480 PF00285 Citrate synthase, C-terminal domain ABIV_RS01495 PF01810 LysE type translocator ABIV_RS01500 PF00440 Bacterial regulatory proteins, tetR family ABIV_RS01505 PF00303 Thymidylate synthase ABIV_RS01510 PF00186 Dihydrofolate reductase ABIV_RS01515 PF01758 Sodium Bile acid symporter family ABIV_RS01520 PF00005 ABC transporter ABIV_RS01525 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABIV_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS01535 PF01914 MarC family integral membrane protein ABIV_RS01540 PF01810 LysE type translocator ABIV_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS01550 PF08448 PAS fold ABIV_RS01550 PF08447 PAS fold ABIV_RS01560 PF01042 Endoribonuclease L-PSP ABIV_RS01570 PF00575 S1 RNA binding domain ABIV_RS01570 PF09371 Tex-like protein N-terminal domain ABIV_RS01570 PF16921 Tex protein YqgF-like domain ABIV_RS01570 PF17674 HHH domain ABIV_RS01575 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ABIV_RS01585 PF00549 CoA-ligase ABIV_RS01585 PF02629 CoA binding domain ABIV_RS01590 PF00549 CoA-ligase ABIV_RS01590 PF08442 ATP-grasp domain ABIV_RS01595 PF00171 Aldehyde dehydrogenase family ABIV_RS01600 PF00205 Thiamine pyrophosphate enzyme, central domain ABIV_RS01600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABIV_RS01600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABIV_RS01605 PF00350 Dynamin family ABIV_RS01610 PF00350 Dynamin family ABIV_RS01615 PF13085 2Fe-2S iron-sulfur cluster binding domain ABIV_RS01615 PF13183 4Fe-4S dicluster domain ABIV_RS01620 PF00890 FAD binding domain ABIV_RS01620 PF02910 Fumarate reductase flavoprotein C-term ABIV_RS01625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABIV_RS01630 PF00361 Proton-conducting membrane transporter ABIV_RS01635 PF00361 Proton-conducting membrane transporter ABIV_RS01635 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABIV_RS01640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABIV_RS01640 PF00361 Proton-conducting membrane transporter ABIV_RS01645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABIV_RS01650 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABIV_RS01655 PF12838 4Fe-4S dicluster domain ABIV_RS01660 PF00146 NADH dehydrogenase ABIV_RS01665 PF00384 Molybdopterin oxidoreductase ABIV_RS01665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABIV_RS01665 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABIV_RS01670 PF00285 Citrate synthase, C-terminal domain ABIV_RS01675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABIV_RS01675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABIV_RS01675 PF10531 SLBB domain ABIV_RS01685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABIV_RS01685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABIV_RS01690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABIV_RS01695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABIV_RS01700 PF00155 Aminotransferase class I and II ABIV_RS01705 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABIV_RS01710 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS01715 PF00117 Glutamine amidotransferase class-I ABIV_RS01755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABIV_RS01760 PF00905 Penicillin binding protein transpeptidase domain ABIV_RS01760 PF03717 Penicillin-binding Protein dimerisation domain ABIV_RS01760 PF03793 PASTA domain ABIV_RS01765 PF01098 Cell cycle protein ABIV_RS01770 PF03033 Glycosyltransferase family 28 N-terminal domain ABIV_RS01770 PF04101 Glycosyltransferase family 28 C-terminal domain ABIV_RS01775 PF02673 Bacitracin resistance protein BacA ABIV_RS01780 PF02621 Menaquinone biosynthesis ABIV_RS01790 PF02391 MoaE protein ABIV_RS01795 PF02811 PHP domain ABIV_RS01800 PF03951 Glutamine synthetase, beta-Grasp domain ABIV_RS01800 PF00120 Glutamine synthetase, catalytic domain ABIV_RS01805 PF00905 Penicillin binding protein transpeptidase domain ABIV_RS01805 PF00912 Transglycosylase ABIV_RS01810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABIV_RS01810 PF00005 ABC transporter ABIV_RS01815 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABIV_RS01815 PF01676 Metalloenzyme superfamily ABIV_RS01820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABIV_RS01820 PF00953 Glycosyl transferase family 4 ABIV_RS01825 PF08245 Mur ligase middle domain ABIV_RS01850 PF00009 Elongation factor Tu GTP binding domain ABIV_RS01850 PF03143 Elongation factor Tu C-terminal domain ABIV_RS01850 PF03144 Elongation factor Tu domain 2 ABIV_RS01855 PF00471 Ribosomal protein L33 ABIV_RS01870 PF02357 Transcription termination factor nusG ABIV_RS01875 PF03946 Ribosomal protein L11, N-terminal domain ABIV_RS01875 PF00298 Ribosomal protein L11, RNA binding domain ABIV_RS01880 PF00687 Ribosomal protein L1p/L10e family ABIV_RS01885 PF00466 Ribosomal protein L10 ABIV_RS01890 PF00542 Ribosomal protein L7/L12 C-terminal domain ABIV_RS01890 PF16320 Ribosomal protein L7/L12 dimerisation domain ABIV_RS01895 PF04565 RNA polymerase Rpb2, domain 3 ABIV_RS01895 PF10385 RNA polymerase beta subunit external 1 domain ABIV_RS01895 PF00562 RNA polymerase Rpb2, domain 6 ABIV_RS01895 PF04563 RNA polymerase beta subunit ABIV_RS01895 PF04561 RNA polymerase Rpb2, domain 2 ABIV_RS01895 PF04560 RNA polymerase Rpb2, domain 7 ABIV_RS01900 PF05000 RNA polymerase Rpb1, domain 4 ABIV_RS01900 PF04998 RNA polymerase Rpb1, domain 5 ABIV_RS01900 PF04983 RNA polymerase Rpb1, domain 3 ABIV_RS01900 PF04997 RNA polymerase Rpb1, domain 1 ABIV_RS01900 PF00623 RNA polymerase Rpb1, domain 2 ABIV_RS01920 PF00589 Phage integrase family ABIV_RS01920 PF13356 Arm DNA-binding domain ABIV_RS01930 PF02384 N-6 DNA Methylase ABIV_RS01985 PF00939 Sodium:sulfate symporter transmembrane region ABIV_RS02010 PF00005 ABC transporter ABIV_RS02020 PF09962 Uncharacterized conserved protein (DUF2196) ABIV_RS02025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABIV_RS02035 PF00034 Cytochrome c ABIV_RS02040 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABIV_RS02045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABIV_RS02050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABIV_RS02065 PF13186 Iron-sulfur cluster-binding domain ABIV_RS02065 PF04055 Radical SAM superfamily ABIV_RS02075 PF10414 Sirohaem synthase dimerisation region ABIV_RS02075 PF14824 Sirohaem biosynthesis protein central ABIV_RS02075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS02090 PF10414 Sirohaem synthase dimerisation region ABIV_RS02090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS02090 PF14824 Sirohaem biosynthesis protein central ABIV_RS02095 PF17805 AsnC-like ligand binding domain ABIV_RS02115 PF00654 Voltage gated chloride channel ABIV_RS02135 PF00164 Ribosomal protein S12/S23 ABIV_RS02140 PF00177 Ribosomal protein S7p/S5e ABIV_RS02145 PF03144 Elongation factor Tu domain 2 ABIV_RS02145 PF00009 Elongation factor Tu GTP binding domain ABIV_RS02145 PF00679 Elongation factor G C-terminus ABIV_RS02145 PF14492 Elongation Factor G, domain II ABIV_RS02145 PF03764 Elongation factor G, domain IV ABIV_RS02150 PF01513 ATP-NAD kinase ABIV_RS02155 PF13476 AAA domain ABIV_RS02165 PF17200 Single Cache domain 2 ABIV_RS02165 PF17200 Single Cache domain 2 ABIV_RS02165 PF00672 HAMP domain ABIV_RS02165 PF00672 HAMP domain ABIV_RS02165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02170 PF01136 Peptidase family U32 ABIV_RS02190 PF02091 Glycyl-tRNA synthetase alpha subunit ABIV_RS02195 PF01784 NIF3 (NGG1p interacting factor 3) ABIV_RS02205 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABIV_RS02210 PF00849 RNA pseudouridylate synthase ABIV_RS02215 PF00448 SRP54-type protein, GTPase domain ABIV_RS02215 PF02881 SRP54-type protein, helical bundle domain ABIV_RS02215 PF02978 Signal peptide binding domain ABIV_RS02220 PF00886 Ribosomal protein S16 ABIV_RS02230 PF01782 RimM N-terminal domain ABIV_RS02240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABIV_RS02240 PF00460 Flagella basal body rod protein ABIV_RS02245 PF00072 Response regulator receiver domain ABIV_RS02255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABIV_RS02255 PF00460 Flagella basal body rod protein ABIV_RS02260 PF00460 Flagella basal body rod protein ABIV_RS02265 PF08345 Flagellar M-ring protein C-terminal ABIV_RS02265 PF01514 Secretory protein of YscJ/FliF family ABIV_RS02270 PF14842 FliG N-terminal domain ABIV_RS02270 PF14841 FliG middle domain ABIV_RS02270 PF01706 FliG C-terminal domain ABIV_RS02280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABIV_RS02290 PF07559 Flagellar basal body protein FlaE ABIV_RS02290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABIV_RS02300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABIV_RS02300 PF07559 Flagellar basal body protein FlaE ABIV_RS02300 PF00460 Flagella basal body rod protein ABIV_RS02300 PF07196 Flagellin hook IN motif ABIV_RS02320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABIV_RS02325 PF01618 MotA/TolQ/ExbB proton channel family ABIV_RS02350 PF00448 SRP54-type protein, GTPase domain ABIV_RS02355 PF10609 NUBPL iron-transfer P-loop NTPase ABIV_RS02365 PF02049 Flagellar hook-basal body complex protein FliE ABIV_RS02370 PF00460 Flagella basal body rod protein ABIV_RS02370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABIV_RS02385 PF01312 FlhB HrpN YscU SpaS Family ABIV_RS02395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABIV_RS02395 PF18269 T3SS EscN ATPase C-terminal domain ABIV_RS02400 PF00669 Bacterial flagellin N-terminal helical region ABIV_RS02400 PF00700 Bacterial flagellin C-terminal helical region ABIV_RS02405 PF00771 FHIPEP family ABIV_RS02420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABIV_RS02420 PF00384 Molybdopterin oxidoreductase ABIV_RS02420 PF01568 Molydopterin dinucleotide binding domain ABIV_RS02430 PF03264 NapC/NirT cytochrome c family, N-terminal region ABIV_RS02435 PF02335 Cytochrome c552 ABIV_RS02440 PF05140 ResB-like family ABIV_RS02440 PF01578 Cytochrome C assembly protein ABIV_RS02450 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS02450 PF03707 Bacterial signalling protein N terminal repeat ABIV_RS02450 PF00563 EAL domain ABIV_RS02455 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABIV_RS02460 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS02460 PF07724 AAA domain (Cdc48 subfamily) ABIV_RS02460 PF17871 AAA lid domain ABIV_RS02460 PF02861 Clp amino terminal domain, pathogenicity island component ABIV_RS02460 PF10431 C-terminal, D2-small domain, of ClpB protein ABIV_RS02470 PF01966 HD domain ABIV_RS02480 PF01594 AI-2E family transporter ABIV_RS02485 PF17864 RuvB AAA lid domain ABIV_RS02485 PF05491 RuvB C-terminal winged helix domain ABIV_RS02485 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABIV_RS02490 PF02548 Ketopantoate hydroxymethyltransferase ABIV_RS02495 PF00290 Tryptophan synthase alpha chain ABIV_RS02500 PF04377 Arginine-tRNA-protein transferase, C terminus ABIV_RS02500 PF04376 Arginine-tRNA-protein transferase, N terminus ABIV_RS02510 PF02421 Ferrous iron transport protein B ABIV_RS02510 PF07670 Nucleoside recognition ABIV_RS02510 PF07664 Ferrous iron transport protein B C terminus ABIV_RS02520 PF01475 Ferric uptake regulator family ABIV_RS02525 PF00258 Flavodoxin ABIV_RS02530 PF03150 Di-haem cytochrome c peroxidase ABIV_RS02530 PF14376 Haem-binding domain ABIV_RS02530 PF00034 Cytochrome c ABIV_RS02535 PF00563 EAL domain ABIV_RS02535 PF03707 Bacterial signalling protein N terminal repeat ABIV_RS02535 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS02540 PF00563 EAL domain ABIV_RS02540 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS02540 PF01590 GAF domain ABIV_RS02540 PF00360 Phytochrome region ABIV_RS02550 PF00072 Response regulator receiver domain ABIV_RS02550 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS02565 PF00672 HAMP domain ABIV_RS02565 PF02743 Cache domain ABIV_RS02565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02570 PF00072 Response regulator receiver domain ABIV_RS02570 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02575 PF08447 PAS fold ABIV_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS02580 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS02580 PF00672 HAMP domain ABIV_RS02585 PF13277 YmdB-like protein ABIV_RS02605 PF01209 ubiE/COQ5 methyltransferase family ABIV_RS02610 PF13742 OB-fold nucleic acid binding domain ABIV_RS02610 PF02601 Exonuclease VII, large subunit ABIV_RS02615 PF02203 Tar ligand binding domain homologue ABIV_RS02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02615 PF00672 HAMP domain ABIV_RS02620 PF08447 PAS fold ABIV_RS02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS02625 PF01584 CheW-like domain ABIV_RS02630 PF00072 Response regulator receiver domain ABIV_RS02635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS02635 PF08448 PAS fold ABIV_RS02635 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS02635 PF00072 Response regulator receiver domain ABIV_RS02635 PF13188 PAS domain ABIV_RS02640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABIV_RS02650 PF02261 Aspartate decarboxylase ABIV_RS02655 PF02575 YbaB/EbfC DNA-binding family ABIV_RS02660 PF00348 Polyprenyl synthetase ABIV_RS02665 PF00166 Chaperonin 10 Kd subunit ABIV_RS02670 PF00118 TCP-1/cpn60 chaperonin family ABIV_RS02680 PF00459 Inositol monophosphatase family ABIV_RS02685 PF01380 SIS domain ABIV_RS02690 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABIV_RS02690 PF02772 S-adenosylmethionine synthetase, central domain ABIV_RS02690 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABIV_RS02695 PF17848 Acetyl-coA carboxylase zinc finger domain ABIV_RS02695 PF01039 Carboxyl transferase domain ABIV_RS02700 PF02590 Predicted SPOUT methyltransferase ABIV_RS02705 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABIV_RS02715 PF01207 Dihydrouridine synthase (Dus) ABIV_RS02725 PF17862 AAA+ lid domain ABIV_RS02725 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS02725 PF01434 Peptidase family M41 ABIV_RS02730 PF08447 PAS fold ABIV_RS02730 PF08448 PAS fold ABIV_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS02735 PF11849 Domain of unknown function (DUF3369) ABIV_RS02740 PF08448 PAS fold ABIV_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS02740 PF08447 PAS fold ABIV_RS02750 PF00682 HMGL-like ABIV_RS02750 PF08502 LeuA allosteric (dimerisation) domain ABIV_RS02755 PF07556 Protein of unknown function (DUF1538) ABIV_RS02760 PF00085 Thioredoxin ABIV_RS02770 PF01624 MutS domain I ABIV_RS02770 PF05192 MutS domain III ABIV_RS02770 PF05190 MutS family domain IV ABIV_RS02770 PF00488 MutS domain V ABIV_RS02770 PF05188 MutS domain II ABIV_RS02780 PF00440 Bacterial regulatory proteins, tetR family ABIV_RS02780 PF17932 Tetracyclin repressor-like, C-terminal domain ABIV_RS02790 PF00977 Histidine biosynthesis protein ABIV_RS02795 PF00117 Glutamine amidotransferase class-I ABIV_RS02800 PF00156 Phosphoribosyl transferase domain ABIV_RS02805 PF01022 Bacterial regulatory protein, arsR family ABIV_RS02810 PF00403 Heavy-metal-associated domain ABIV_RS02815 PF06421 GTP-binding protein LepA C-terminus ABIV_RS02815 PF00009 Elongation factor Tu GTP binding domain ABIV_RS02815 PF00679 Elongation factor G C-terminus ABIV_RS02815 PF03144 Elongation factor Tu domain 2 ABIV_RS02820 PF00691 OmpA family ABIV_RS02820 PF05736 OprF membrane domain ABIV_RS02825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABIV_RS02825 PF14572 Phosphoribosyl synthetase-associated domain ABIV_RS02845 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABIV_RS02850 PF01321 Creatinase/Prolidase N-terminal domain ABIV_RS02850 PF00557 Metallopeptidase family M24 ABIV_RS02855 PF01220 Dehydroquinase class II ABIV_RS02860 PF01979 Amidohydrolase family ABIV_RS02865 PF01343 Peptidase family S49 ABIV_RS02870 PF00270 DEAD/DEAH box helicase ABIV_RS02870 PF00271 Helicase conserved C-terminal domain ABIV_RS02875 PF00871 Acetokinase family ABIV_RS02880 PF01515 Phosphate acetyl/butaryl transferase ABIV_RS02885 PF00871 Acetokinase family ABIV_RS02900 PF00474 Sodium:solute symporter family ABIV_RS02910 PF00474 Sodium:solute symporter family ABIV_RS02920 PF00929 Exonuclease ABIV_RS02930 PF00474 Sodium:solute symporter family ABIV_RS02940 PF00072 Response regulator receiver domain ABIV_RS02940 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS02945 PF00672 HAMP domain ABIV_RS02945 PF13426 PAS domain ABIV_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS02945 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS02990 PF00994 Probable molybdopterin binding domain ABIV_RS02990 PF18146 Damage-inducible protein CinA KH domain ABIV_RS02990 PF02464 Competence-damaged protein ABIV_RS02995 PF06039 Malate:quinone oxidoreductase (Mqo) ABIV_RS03000 PF00133 tRNA synthetases class I (I, L, M and V) ABIV_RS03000 PF08264 Anticodon-binding domain of tRNA ABIV_RS03015 PF08245 Mur ligase middle domain ABIV_RS03015 PF02875 Mur ligase family, glutamate ligase domain ABIV_RS03035 PF00593 TonB dependent receptor ABIV_RS03035 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS03060 PF01882 Protein of unknown function DUF58 ABIV_RS03065 PF17863 AAA lid domain ABIV_RS03065 PF07726 ATPase family associated with various cellular activities (AAA) ABIV_RS03075 PF00318 Ribosomal protein S2 ABIV_RS03080 PF00889 Elongation factor TS ABIV_RS03085 PF00005 ABC transporter ABIV_RS03095 PF00625 Guanylate kinase ABIV_RS03100 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS03100 PF10442 FIST C domain ABIV_RS03100 PF08495 FIST N domain ABIV_RS03100 PF00563 EAL domain ABIV_RS03105 PF00403 Heavy-metal-associated domain ABIV_RS03120 PF01627 Hpt domain ABIV_RS03120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABIV_RS03120 PF00072 Response regulator receiver domain ABIV_RS03120 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03120 PF00672 HAMP domain ABIV_RS03125 PF00072 Response regulator receiver domain ABIV_RS03140 PF05362 Lon protease (S16) C-terminal proteolytic domain ABIV_RS03140 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS03140 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABIV_RS03145 PF13525 Outer membrane lipoprotein ABIV_RS03150 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABIV_RS03150 PF03807 NADP oxidoreductase coenzyme F420-dependent ABIV_RS03170 PF03553 Na+/H+ antiporter family ABIV_RS03170 PF13726 Na+-H+ antiporter family ABIV_RS03175 PF01725 Ham1 family ABIV_RS03180 PF07690 Major Facilitator Superfamily ABIV_RS03200 PF00873 AcrB/AcrD/AcrF family ABIV_RS03210 PF01925 Sulfite exporter TauE/SafE ABIV_RS03215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABIV_RS03215 PF12833 Helix-turn-helix domain ABIV_RS03215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABIV_RS03215 PF02805 Metal binding domain of Ada ABIV_RS03220 PF00464 Serine hydroxymethyltransferase ABIV_RS03230 PF08264 Anticodon-binding domain of tRNA ABIV_RS03230 PF00133 tRNA synthetases class I (I, L, M and V) ABIV_RS03230 PF10458 Valyl tRNA synthetase tRNA binding arm ABIV_RS03240 PF13361 UvrD-like helicase C-terminal domain ABIV_RS03240 PF00580 UvrD/REP helicase N-terminal domain ABIV_RS03255 PF01142 tRNA pseudouridine synthase D (TruD) ABIV_RS03265 PF02203 Tar ligand binding domain homologue ABIV_RS03265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS03265 PF00672 HAMP domain ABIV_RS03270 PF01330 RuvA N terminal domain ABIV_RS03270 PF07499 RuvA, C-terminal domain ABIV_RS03275 PF07478 D-ala D-ala ligase C-terminus ABIV_RS03275 PF01820 D-ala D-ala ligase N-terminus ABIV_RS03285 PF01225 Mur ligase family, catalytic domain ABIV_RS03285 PF02875 Mur ligase family, glutamate ligase domain ABIV_RS03285 PF08245 Mur ligase middle domain ABIV_RS03295 PF01230 HIT domain ABIV_RS03300 PF01327 Polypeptide deformylase ABIV_RS03320 PF01266 FAD dependent oxidoreductase ABIV_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03325 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS03325 PF00072 Response regulator receiver domain ABIV_RS03325 PF09456 RcsC Alpha-Beta-Loop (ABL) ABIV_RS03335 PF00338 Ribosomal protein S10p/S20e ABIV_RS03340 PF00297 Ribosomal protein L3 ABIV_RS03345 PF00573 Ribosomal protein L4/L1 family ABIV_RS03350 PF00276 Ribosomal protein L23 ABIV_RS03355 PF03947 Ribosomal Proteins L2, C-terminal domain ABIV_RS03355 PF00181 Ribosomal Proteins L2, RNA binding domain ABIV_RS03360 PF00203 Ribosomal protein S19 ABIV_RS03365 PF00237 Ribosomal protein L22p/L17e ABIV_RS03370 PF00189 Ribosomal protein S3, C-terminal domain ABIV_RS03370 PF07650 KH domain ABIV_RS03375 PF00252 Ribosomal protein L16p/L10e ABIV_RS03380 PF00831 Ribosomal L29 protein ABIV_RS03385 PF00366 Ribosomal protein S17 ABIV_RS03390 PF00238 Ribosomal protein L14p/L23e ABIV_RS03395 PF00467 KOW motif ABIV_RS03395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABIV_RS03400 PF00673 ribosomal L5P family C-terminus ABIV_RS03400 PF00281 Ribosomal protein L5 ABIV_RS03405 PF00253 Ribosomal protein S14p/S29e ABIV_RS03410 PF00410 Ribosomal protein S8 ABIV_RS03415 PF00347 Ribosomal protein L6 ABIV_RS03420 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABIV_RS03425 PF00333 Ribosomal protein S5, N-terminal domain ABIV_RS03425 PF03719 Ribosomal protein S5, C-terminal domain ABIV_RS03430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABIV_RS03435 PF00344 SecY translocase ABIV_RS03440 PF00557 Metallopeptidase family M24 ABIV_RS03445 PF01176 Translation initiation factor 1A / IF-1 ABIV_RS03450 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS03450 PF08448 PAS fold ABIV_RS03455 PF03167 Uracil DNA glycosylase superfamily ABIV_RS03465 PF02938 GAD domain ABIV_RS03465 PF01336 OB-fold nucleic acid binding domain ABIV_RS03465 PF00152 tRNA synthetases class II (D, K and N) ABIV_RS03480 PF08497 Radical SAM N-terminal ABIV_RS03480 PF04055 Radical SAM superfamily ABIV_RS03500 PF12794 Mechanosensitive ion channel inner membrane domain 1 ABIV_RS03500 PF12795 Mechanosensitive ion channel porin domain ABIV_RS03500 PF00924 Mechanosensitive ion channel ABIV_RS03505 PF01544 CorA-like Mg2+ transporter protein ABIV_RS03510 PF01769 Divalent cation transporter ABIV_RS03510 PF03448 MgtE intracellular N domain ABIV_RS03510 PF00571 CBS domain ABIV_RS03520 PF00842 Alanine racemase, C-terminal domain ABIV_RS03520 PF01168 Alanine racemase, N-terminal domain ABIV_RS03525 PF08459 UvrC Helix-hairpin-helix N-terminal ABIV_RS03525 PF02151 UvrB/uvrC motif ABIV_RS03525 PF01541 GIY-YIG catalytic domain ABIV_RS03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03530 PF08448 PAS fold ABIV_RS03530 PF08447 PAS fold ABIV_RS03535 PF02203 Tar ligand binding domain homologue ABIV_RS03535 PF00672 HAMP domain ABIV_RS03535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS03540 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS03540 PF00072 Response regulator receiver domain ABIV_RS03545 PF00672 HAMP domain ABIV_RS03545 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03545 PF13756 Stimulus-sensing domain ABIV_RS03545 PF13755 Sensor N-terminal transmembrane domain ABIV_RS03555 PF01636 Phosphotransferase enzyme family ABIV_RS03560 PF00255 Glutathione peroxidase ABIV_RS03570 PF01556 DnaJ C terminal domain ABIV_RS03570 PF00226 DnaJ domain ABIV_RS03570 PF00684 DnaJ central domain ABIV_RS03575 PF00672 HAMP domain ABIV_RS03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS03575 PF02203 Tar ligand binding domain homologue ABIV_RS03580 PF13426 PAS domain ABIV_RS03580 PF13188 PAS domain ABIV_RS03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03585 PF00684 DnaJ central domain ABIV_RS03585 PF01556 DnaJ C terminal domain ABIV_RS03585 PF00226 DnaJ domain ABIV_RS03605 PF00034 Cytochrome c ABIV_RS03605 PF03150 Di-haem cytochrome c peroxidase ABIV_RS03615 PF03372 Endonuclease/Exonuclease/phosphatase family ABIV_RS03620 PF00440 Bacterial regulatory proteins, tetR family ABIV_RS03625 PF00578 AhpC/TSA family ABIV_RS03645 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABIV_RS03650 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS03660 PF03788 LrgA family ABIV_RS03665 PF04172 LrgB-like family ABIV_RS03675 PF01047 MarR family ABIV_RS03685 PF03466 LysR substrate binding domain ABIV_RS03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABIV_RS03695 PF01361 Tautomerase enzyme ABIV_RS03705 PF01235 Sodium:alanine symporter family ABIV_RS03710 PF08448 PAS fold ABIV_RS03710 PF13188 PAS domain ABIV_RS03710 PF00072 Response regulator receiver domain ABIV_RS03710 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03715 PF00196 Bacterial regulatory proteins, luxR family ABIV_RS03715 PF00072 Response regulator receiver domain ABIV_RS03720 PF10415 Fumarase C C-terminus ABIV_RS03720 PF00206 Lyase ABIV_RS03730 PF01368 DHH family ABIV_RS03730 PF02833 DHHA2 domain ABIV_RS03735 PF02311 AraC-like ligand binding domain ABIV_RS03735 PF12833 Helix-turn-helix domain ABIV_RS03740 PF08502 LeuA allosteric (dimerisation) domain ABIV_RS03740 PF00682 HMGL-like ABIV_RS03750 PF08713 DNA alkylation repair enzyme ABIV_RS03755 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS03760 PF04073 Aminoacyl-tRNA editing domain ABIV_RS03765 PF05088 Bacterial NAD-glutamate dehydrogenase ABIV_RS03775 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS03775 PF00563 EAL domain ABIV_RS03775 PF00360 Phytochrome region ABIV_RS03775 PF01590 GAF domain ABIV_RS03790 PF00183 Hsp90 protein ABIV_RS03805 PF00183 Hsp90 protein ABIV_RS03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABIV_RS03815 PF03466 LysR substrate binding domain ABIV_RS03840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABIV_RS03840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABIV_RS03870 PF03641 Possible lysine decarboxylase ABIV_RS03875 PF08447 PAS fold ABIV_RS03875 PF08448 PAS fold ABIV_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS03880 PF00072 Response regulator receiver domain ABIV_RS03880 PF12833 Helix-turn-helix domain ABIV_RS03885 PF03480 Bacterial extracellular solute-binding protein, family 7 ABIV_RS03895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABIV_RS03900 PF03746 LamB/YcsF family ABIV_RS03910 PF02626 Carboxyltransferase domain, subdomain A and B ABIV_RS03920 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS03920 PF00563 EAL domain ABIV_RS03920 PF10442 FIST C domain ABIV_RS03920 PF08495 FIST N domain ABIV_RS03930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS03930 PF00672 HAMP domain ABIV_RS03930 PF02203 Tar ligand binding domain homologue ABIV_RS03935 PF00271 Helicase conserved C-terminal domain ABIV_RS03935 PF00270 DEAD/DEAH box helicase ABIV_RS03935 PF03880 DbpA RNA binding domain ABIV_RS03950 PF03631 Virulence factor BrkB ABIV_RS03955 PF02913 FAD linked oxidases, C-terminal domain ABIV_RS03955 PF01565 FAD binding domain ABIV_RS03965 PF00578 AhpC/TSA family ABIV_RS03970 PF13649 Methyltransferase domain ABIV_RS03975 PF06574 FAD synthetase ABIV_RS03975 PF01687 Riboflavin kinase ABIV_RS03980 PF01479 S4 domain ABIV_RS03980 PF01728 FtsJ-like methyltransferase ABIV_RS03985 PF09186 Domain of unknown function (DUF1949) ABIV_RS03985 PF01205 Uncharacterized protein family UPF0029 ABIV_RS03990 PF00263 Bacterial type II and III secretion system protein ABIV_RS03990 PF03958 Bacterial type II/III secretion system short domain ABIV_RS04005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABIV_RS04015 PF01645 Conserved region in glutamate synthase ABIV_RS04015 PF01645 Conserved region in glutamate synthase ABIV_RS04030 PF00793 DAHP synthetase I family ABIV_RS04035 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABIV_RS04040 PF01029 NusB family ABIV_RS04045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABIV_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS04070 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS04070 PF00989 PAS fold ABIV_RS04090 PF12833 Helix-turn-helix domain ABIV_RS04090 PF00072 Response regulator receiver domain ABIV_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS04095 PF08447 PAS fold ABIV_RS04095 PF08448 PAS fold ABIV_RS04100 PF12833 Helix-turn-helix domain ABIV_RS04120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABIV_RS04125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABIV_RS04130 PF03480 Bacterial extracellular solute-binding protein, family 7 ABIV_RS04135 PF03480 Bacterial extracellular solute-binding protein, family 7 ABIV_RS04140 PF01493 GXGXG motif ABIV_RS04140 PF01645 Conserved region in glutamate synthase ABIV_RS04140 PF04898 Glutamate synthase central domain ABIV_RS04140 PF00310 Glutamine amidotransferases class-II ABIV_RS04145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABIV_RS04145 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS04150 PF00459 Inositol monophosphatase family ABIV_RS04155 PF00037 4Fe-4S binding domain ABIV_RS04165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABIV_RS04175 PF01219 Prokaryotic diacylglycerol kinase ABIV_RS04200 PF10707 PhoP regulatory network protein YrbL ABIV_RS04205 PF00884 Sulfatase ABIV_RS04210 PF00534 Glycosyl transferases group 1 ABIV_RS04215 PF00535 Glycosyl transferase family 2 ABIV_RS04220 PF13439 Glycosyltransferase Family 4 ABIV_RS04220 PF00534 Glycosyl transferases group 1 ABIV_RS04230 PF00483 Nucleotidyl transferase ABIV_RS04235 PF16363 GDP-mannose 4,6 dehydratase ABIV_RS04240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABIV_RS04245 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS04250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABIV_RS04260 PF00884 Sulfatase ABIV_RS04270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABIV_RS04290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABIV_RS04295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABIV_RS04295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABIV_RS04305 PF00342 Phosphoglucose isomerase ABIV_RS04310 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS04315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABIV_RS04315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABIV_RS04315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABIV_RS04320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABIV_RS04320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABIV_RS04325 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS04330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABIV_RS04340 PF14602 Hexapeptide repeat of succinyl-transferase ABIV_RS04340 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS04340 PF12464 Maltose acetyltransferase ABIV_RS04355 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS04360 PF00535 Glycosyl transferase family 2 ABIV_RS04370 PF12464 Maltose acetyltransferase ABIV_RS04370 PF14602 Hexapeptide repeat of succinyl-transferase ABIV_RS04370 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS04385 PF00534 Glycosyl transferases group 1 ABIV_RS04385 PF13439 Glycosyltransferase Family 4 ABIV_RS04390 PF00117 Glutamine amidotransferase class-I ABIV_RS04395 PF00977 Histidine biosynthesis protein ABIV_RS04400 PF13439 Glycosyltransferase Family 4 ABIV_RS04405 PF02350 UDP-N-acetylglucosamine 2-epimerase ABIV_RS04420 PF02397 Bacterial sugar transferase ABIV_RS04425 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS04425 PF17836 PglD N-terminal domain ABIV_RS04430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABIV_RS04435 PF02719 Polysaccharide biosynthesis protein ABIV_RS04440 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS04445 PF01467 Cytidylyltransferase-like ABIV_RS04445 PF00294 pfkB family carbohydrate kinase ABIV_RS04450 PF13580 SIS domain ABIV_RS04460 PF14743 DNA ligase OB-like domain ABIV_RS04460 PF01068 ATP dependent DNA ligase domain ABIV_RS04465 PF00830 Ribosomal L28 family ABIV_RS04475 PF01960 ArgJ family ABIV_RS04485 PF03989 DNA gyrase C-terminal domain, beta-propeller ABIV_RS04485 PF00521 DNA gyrase/topoisomerase IV, subunit A ABIV_RS04490 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABIV_RS04490 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABIV_RS04500 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABIV_RS04505 PF04055 Radical SAM superfamily ABIV_RS04520 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABIV_RS04525 PF00226 DnaJ domain ABIV_RS04525 PF05099 Tellurite resistance protein TerB ABIV_RS04530 PF03737 Aldolase/RraA ABIV_RS04535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABIV_RS04535 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABIV_RS04540 PF08281 Sigma-70, region 4 ABIV_RS04540 PF04542 Sigma-70 region 2 ABIV_RS04550 PF00578 AhpC/TSA family ABIV_RS04550 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABIV_RS04555 PF08534 Redoxin ABIV_RS04560 PF02203 Tar ligand binding domain homologue ABIV_RS04560 PF00672 HAMP domain ABIV_RS04560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS04565 PF00563 EAL domain ABIV_RS04565 PF00360 Phytochrome region ABIV_RS04565 PF01590 GAF domain ABIV_RS04565 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS04575 PF00989 PAS fold ABIV_RS04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS04575 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS04580 PF03848 Tellurite resistance protein TehB ABIV_RS04590 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS04590 PF17151 Periplasmic sensor domain ABIV_RS04605 PF00005 ABC transporter ABIV_RS04610 PF02390 Putative methyltransferase ABIV_RS04620 PF00849 RNA pseudouridylate synthase ABIV_RS04620 PF01479 S4 domain ABIV_RS04625 PF01098 Cell cycle protein ABIV_RS04630 PF00491 Arginase family ABIV_RS04650 PF00202 Aminotransferase class-III ABIV_RS04655 PF06865 Pyrimidine/purine nucleoside phosphorylase ABIV_RS04675 PF04539 Sigma-70 region 3 ABIV_RS04675 PF00140 Sigma-70 factor, region 1.2 ABIV_RS04675 PF04542 Sigma-70 region 2 ABIV_RS04675 PF04545 Sigma-70, region 4 ABIV_RS04680 PF00694 Aconitase C-terminal domain ABIV_RS04685 PF00180 Isocitrate/isopropylmalate dehydrogenase ABIV_RS04700 PF00444 Ribosomal protein L36 ABIV_RS04705 PF00416 Ribosomal protein S13/S18 ABIV_RS04710 PF00411 Ribosomal protein S11 ABIV_RS04715 PF00163 Ribosomal protein S4/S9 N-terminal domain ABIV_RS04715 PF01479 S4 domain ABIV_RS04720 PF01000 RNA polymerase Rpb3/RpoA insert domain ABIV_RS04720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABIV_RS04720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABIV_RS04725 PF01196 Ribosomal protein L17 ABIV_RS04730 PF01425 Amidase ABIV_RS04735 PF00478 IMP dehydrogenase / GMP reductase domain ABIV_RS04735 PF00571 CBS domain ABIV_RS04800 PF05191 Adenylate kinase, active site lid ABIV_RS04805 PF07478 D-ala D-ala ligase C-terminus ABIV_RS04805 PF01820 D-ala D-ala ligase N-terminus ABIV_RS04810 PF00313 'Cold-shock' DNA-binding domain ABIV_RS04815 PF08448 PAS fold ABIV_RS04815 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS04840 PF00753 Metallo-beta-lactamase superfamily ABIV_RS04840 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABIV_RS04845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABIV_RS04850 PF03641 Possible lysine decarboxylase ABIV_RS04855 PF00258 Flavodoxin ABIV_RS04870 PF04143 Sulphur transport ABIV_RS04880 PF00962 Adenosine/AMP deaminase ABIV_RS04890 PF00561 alpha/beta hydrolase fold ABIV_RS04900 PF04002 RadC-like JAB domain ABIV_RS04915 PF00899 ThiF family ABIV_RS04920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABIV_RS04920 PF02142 MGS-like domain ABIV_RS04920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABIV_RS05185 PF00005 ABC transporter ABIV_RS05185 PF03412 Peptidase C39 family ABIV_RS05185 PF00664 ABC transporter transmembrane region ABIV_RS05275 PF13286 Phosphohydrolase-associated domain ABIV_RS05275 PF01966 HD domain ABIV_RS05290 PF02899 Phage integrase, N-terminal SAM-like domain ABIV_RS05290 PF00589 Phage integrase family ABIV_RS05295 PF00149 Calcineurin-like phosphoesterase ABIV_RS05295 PF12320 Type 5 capsule protein repressor C-terminal domain ABIV_RS05300 PF13476 AAA domain ABIV_RS05305 PF00005 ABC transporter ABIV_RS05315 PF00270 DEAD/DEAH box helicase ABIV_RS05315 PF00271 Helicase conserved C-terminal domain ABIV_RS05315 PF00570 HRDC domain ABIV_RS05315 PF16124 RecQ zinc-binding ABIV_RS05315 PF09382 RQC domain ABIV_RS05340 PF01966 HD domain ABIV_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS05350 PF00005 ABC transporter ABIV_RS05365 PF00593 TonB dependent receptor ABIV_RS05365 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS05370 PF00672 HAMP domain ABIV_RS05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS05370 PF18698 Histidine kinase sensor domain ABIV_RS05370 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS05375 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS05375 PF00072 Response regulator receiver domain ABIV_RS05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS05380 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS05385 PF00563 EAL domain ABIV_RS05385 PF08495 FIST N domain ABIV_RS05385 PF10442 FIST C domain ABIV_RS05385 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS05395 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS05395 PF17158 Membrane-associated sensor, integral membrane domain ABIV_RS05405 PF01761 3-dehydroquinate synthase ABIV_RS05415 PF00919 Uncharacterized protein family UPF0004 ABIV_RS05415 PF04055 Radical SAM superfamily ABIV_RS05420 PF17862 AAA+ lid domain ABIV_RS05420 PF01434 Peptidase family M41 ABIV_RS05420 PF06480 FtsH Extracellular ABIV_RS05420 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS05430 PF00994 Probable molybdopterin binding domain ABIV_RS05435 PF00939 Sodium:sulfate symporter transmembrane region ABIV_RS05440 PF00672 HAMP domain ABIV_RS05440 PF02203 Tar ligand binding domain homologue ABIV_RS05440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05445 PF09105 Elongation factor SelB, winged helix ABIV_RS05445 PF03144 Elongation factor Tu domain 2 ABIV_RS05445 PF09106 Elongation factor SelB, winged helix ABIV_RS05445 PF09107 Elongation factor SelB, winged helix ABIV_RS05445 PF00009 Elongation factor Tu GTP binding domain ABIV_RS05450 PF03841 L-seryl-tRNA selenium transferase ABIV_RS05455 PF02769 AIR synthase related protein, C-terminal domain ABIV_RS05455 PF00586 AIR synthase related protein, N-terminal domain ABIV_RS05465 PF00005 ABC transporter ABIV_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS05480 PF00072 Response regulator receiver domain ABIV_RS05480 PF00158 Sigma-54 interaction domain ABIV_RS05485 PF02702 Osmosensitive K+ channel His kinase sensor domain ABIV_RS05485 PF13493 Domain of unknown function (DUF4118) ABIV_RS05485 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS05515 PF13247 4Fe-4S dicluster domain ABIV_RS05525 PF02634 FdhD/NarQ family ABIV_RS05540 PF00994 Probable molybdopterin binding domain ABIV_RS05540 PF03453 MoeA N-terminal region (domain I and II) ABIV_RS05540 PF03454 MoeA C-terminal region (domain IV) ABIV_RS05545 PF00682 HMGL-like ABIV_RS05550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05550 PF00672 HAMP domain ABIV_RS05550 PF02203 Tar ligand binding domain homologue ABIV_RS05555 PF08447 PAS fold ABIV_RS05555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05560 PF01713 Smr domain ABIV_RS05560 PF00488 MutS domain V ABIV_RS05565 PF05552 Conserved TM helix ABIV_RS05565 PF00924 Mechanosensitive ion channel ABIV_RS05580 PF01546 Peptidase family M20/M25/M40 ABIV_RS05580 PF07687 Peptidase dimerisation domain ABIV_RS05595 PF02311 AraC-like ligand binding domain ABIV_RS05595 PF12833 Helix-turn-helix domain ABIV_RS05600 PF01161 Phosphatidylethanolamine-binding protein ABIV_RS05610 PF01177 Asp/Glu/Hydantoin racemase ABIV_RS05620 PF08274 PhnA Zinc-Ribbon ABIV_RS05620 PF03831 PhnA domain ABIV_RS05625 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABIV_RS05635 PF12833 Helix-turn-helix domain ABIV_RS05635 PF02311 AraC-like ligand binding domain ABIV_RS05650 PF00155 Aminotransferase class I and II ABIV_RS05650 PF00392 Bacterial regulatory proteins, gntR family ABIV_RS05655 PF03473 MOSC domain ABIV_RS05660 PF00202 Aminotransferase class-III ABIV_RS05700 PF01638 HxlR-like helix-turn-helix ABIV_RS05705 PF02525 Flavodoxin-like fold ABIV_RS05715 PF00881 Nitroreductase family ABIV_RS05720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABIV_RS05730 PF02926 THUMP domain ABIV_RS05730 PF02568 Thiamine biosynthesis protein (ThiI) ABIV_RS05735 PF08212 Lipocalin-like domain ABIV_RS05750 PF13426 PAS domain ABIV_RS05750 PF08447 PAS fold ABIV_RS05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05760 PF03851 UV-endonuclease UvdE ABIV_RS05770 PF03109 ABC1 family ABIV_RS05775 PF12792 CSS motif domain associated with EAL ABIV_RS05775 PF00563 EAL domain ABIV_RS05780 PF01243 Pyridoxamine 5'-phosphate oxidase ABIV_RS05780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABIV_RS05795 PF02581 Thiamine monophosphate synthase ABIV_RS05800 PF08543 Phosphomethylpyrimidine kinase ABIV_RS05820 PF01593 Flavin containing amine oxidoreductase ABIV_RS05845 PF10442 FIST C domain ABIV_RS05845 PF08495 FIST N domain ABIV_RS05845 PF00563 EAL domain ABIV_RS05845 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS05850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05850 PF00672 HAMP domain ABIV_RS05850 PF02203 Tar ligand binding domain homologue ABIV_RS05855 PF00005 ABC transporter ABIV_RS05855 PF12848 ABC transporter ABIV_RS05860 PF03061 Thioesterase superfamily ABIV_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS05870 PF00072 Response regulator receiver domain ABIV_RS05870 PF00672 HAMP domain ABIV_RS05870 PF01627 Hpt domain ABIV_RS05870 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS05870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABIV_RS05875 PF00072 Response regulator receiver domain ABIV_RS05880 PF12826 Helix-hairpin-helix motif ABIV_RS05880 PF00533 BRCA1 C Terminus (BRCT) domain ABIV_RS05880 PF01653 NAD-dependent DNA ligase adenylation domain ABIV_RS05880 PF03120 NAD-dependent DNA ligase OB-fold domain ABIV_RS05885 PF01209 ubiE/COQ5 methyltransferase family ABIV_RS05895 PF00672 HAMP domain ABIV_RS05895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS05895 PF02203 Tar ligand binding domain homologue ABIV_RS05900 PF00578 AhpC/TSA family ABIV_RS05900 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABIV_RS05930 PF00206 Lyase ABIV_RS05930 PF10415 Fumarase C C-terminus ABIV_RS05940 PF02743 Cache domain ABIV_RS05940 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS05945 PF01546 Peptidase family M20/M25/M40 ABIV_RS05945 PF07687 Peptidase dimerisation domain ABIV_RS05950 PF01613 Flavin reductase like domain ABIV_RS05970 PF01575 MaoC like domain ABIV_RS05975 PF13193 AMP-binding enzyme C-terminal domain ABIV_RS05975 PF00501 AMP-binding enzyme ABIV_RS05990 PF04055 Radical SAM superfamily ABIV_RS05995 PF03099 Biotin/lipoate A/B protein ligase family ABIV_RS06000 PF00456 Transketolase, thiamine diphosphate binding domain ABIV_RS06000 PF17831 Pyruvate dehydrogenase E1 component middle domain ABIV_RS06005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABIV_RS06005 PF00364 Biotin-requiring enzyme ABIV_RS06005 PF02817 e3 binding domain ABIV_RS06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS06010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABIV_RS06025 PF12848 ABC transporter ABIV_RS06025 PF16326 ABC transporter C-terminal domain ABIV_RS06025 PF00005 ABC transporter ABIV_RS06040 PF10502 Signal peptidase, peptidase S26 ABIV_RS06055 PF00589 Phage integrase family ABIV_RS06055 PF13495 Phage integrase, N-terminal SAM-like domain ABIV_RS06060 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS06060 PF00072 Response regulator receiver domain ABIV_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06065 PF08448 PAS fold ABIV_RS06065 PF08447 PAS fold ABIV_RS06070 PF03737 Aldolase/RraA ABIV_RS06100 PF00437 Type II/IV secretion system protein ABIV_RS06105 PF00263 Bacterial type II and III secretion system protein ABIV_RS06105 PF03958 Bacterial type II/III secretion system short domain ABIV_RS06135 PF00482 Type II secretion system (T2SS), protein F ABIV_RS06145 PF07963 Prokaryotic N-terminal methylation motif ABIV_RS06145 PF08334 Type II secretion system (T2SS), protein G ABIV_RS06175 PF01464 Transglycosylase SLT domain ABIV_RS06175 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ABIV_RS06185 PF00271 Helicase conserved C-terminal domain ABIV_RS06185 PF00270 DEAD/DEAH box helicase ABIV_RS06190 PF00209 Sodium:neurotransmitter symporter family ABIV_RS06200 PF02547 Queuosine biosynthesis protein ABIV_RS06205 PF00902 Sec-independent protein translocase protein (TatC) ABIV_RS06210 PF02416 mttA/Hcf106 family ABIV_RS06215 PF05099 Tellurite resistance protein TerB ABIV_RS06215 PF00226 DnaJ domain ABIV_RS06235 PF02540 NAD synthase ABIV_RS06240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABIV_RS06245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABIV_RS06260 PF03738 Glutathionylspermidine synthase preATP-grasp ABIV_RS06270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABIV_RS06270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABIV_RS06275 PF00582 Universal stress protein family ABIV_RS06280 PF02567 Phenazine biosynthesis-like protein ABIV_RS06305 PF12102 Domain of unknown function (DUF3578) ABIV_RS06305 PF07728 AAA domain (dynein-related subfamily) ABIV_RS06340 PF00149 Calcineurin-like phosphoesterase ABIV_RS06360 PF08501 Shikimate dehydrogenase substrate binding domain ABIV_RS06365 PF02578 Multi-copper polyphenol oxidoreductase laccase ABIV_RS06370 PF00390 Malic enzyme, N-terminal domain ABIV_RS06370 PF01515 Phosphate acetyl/butaryl transferase ABIV_RS06370 PF03949 Malic enzyme, NAD binding domain ABIV_RS06375 PF01842 ACT domain ABIV_RS06375 PF00551 Formyl transferase ABIV_RS06380 PF00588 SpoU rRNA Methylase family ABIV_RS06395 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS06395 PF00072 Response regulator receiver domain ABIV_RS06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06400 PF00672 HAMP domain ABIV_RS06400 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS06410 PF12801 4Fe-4S binding domain ABIV_RS06415 PF01618 MotA/TolQ/ExbB proton channel family ABIV_RS06420 PF02472 Biopolymer transport protein ExbD/TolR ABIV_RS06435 PF13419 Haloacid dehalogenase-like hydrolase ABIV_RS06440 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS06440 PF00072 Response regulator receiver domain ABIV_RS06445 PF01578 Cytochrome C assembly protein ABIV_RS06445 PF05140 ResB-like family ABIV_RS06450 PF08003 Protein of unknown function (DUF1698) ABIV_RS06455 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS06460 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS06460 PF01590 GAF domain ABIV_RS06460 PF00563 EAL domain ABIV_RS06460 PF00360 Phytochrome region ABIV_RS06470 PF04305 Protein of unknown function (DUF455) ABIV_RS06475 PF00625 Guanylate kinase ABIV_RS06485 PF00291 Pyridoxal-phosphate dependent enzyme ABIV_RS06490 PF01556 DnaJ C terminal domain ABIV_RS06490 PF00684 DnaJ central domain ABIV_RS06490 PF00226 DnaJ domain ABIV_RS06495 PF02132 RecR protein ABIV_RS06495 PF13662 Toprim domain ABIV_RS06510 PF08448 PAS fold ABIV_RS06510 PF08447 PAS fold ABIV_RS06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06515 PF12833 Helix-turn-helix domain ABIV_RS06515 PF00072 Response regulator receiver domain ABIV_RS06520 PF00072 Response regulator receiver domain ABIV_RS06530 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS06535 PF00764 Arginosuccinate synthase ABIV_RS06545 PF00591 Glycosyl transferase family, a/b domain ABIV_RS06545 PF02885 Glycosyl transferase family, helical bundle domain ABIV_RS06550 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABIV_RS06555 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABIV_RS06555 PF00005 ABC transporter ABIV_RS06560 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS06560 PF08448 PAS fold ABIV_RS06565 PF02348 Cytidylyltransferase ABIV_RS06570 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB ABIV_RS06570 PF08448 PAS fold ABIV_RS06570 PF00672 HAMP domain ABIV_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06570 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS06575 PF01612 3'-5' exonuclease ABIV_RS06575 PF00476 DNA polymerase family A ABIV_RS06575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABIV_RS06575 PF01367 5'-3' exonuclease, C-terminal SAM fold ABIV_RS06595 PF08447 PAS fold ABIV_RS06595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS06600 PF01790 Prolipoprotein diacylglyceryl transferase ABIV_RS06605 PF02754 Cysteine-rich domain ABIV_RS06605 PF13183 4Fe-4S dicluster domain ABIV_RS06605 PF02665 Nitrate reductase gamma subunit ABIV_RS06610 PF06969 HemN C-terminal domain ABIV_RS06610 PF04055 Radical SAM superfamily ABIV_RS06615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABIV_RS06615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABIV_RS06620 PF00731 AIR carboxylase ABIV_RS06625 PF02222 ATP-grasp domain ABIV_RS06625 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABIV_RS06645 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS06645 PF00072 Response regulator receiver domain ABIV_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06650 PF08448 PAS fold ABIV_RS06650 PF08447 PAS fold ABIV_RS06655 PF00490 Delta-aminolevulinic acid dehydratase ABIV_RS06660 PF00925 GTP cyclohydrolase II ABIV_RS06665 PF02527 rRNA small subunit methyltransferase G ABIV_RS06680 PF02092 Glycyl-tRNA synthetase beta subunit ABIV_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06685 PF00989 PAS fold ABIV_RS06685 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS06715 PF00925 GTP cyclohydrolase II ABIV_RS06715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABIV_RS06720 PF01293 Phosphoenolpyruvate carboxykinase ABIV_RS06725 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABIV_RS06730 PF00682 HMGL-like ABIV_RS06730 PF00364 Biotin-requiring enzyme ABIV_RS06730 PF02436 Conserved carboxylase domain ABIV_RS06735 PF04277 Oxaloacetate decarboxylase, gamma chain ABIV_RS06750 PF00133 tRNA synthetases class I (I, L, M and V) ABIV_RS06750 PF09334 tRNA synthetases class I (M) ABIV_RS06750 PF01588 Putative tRNA binding domain ABIV_RS06760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABIV_RS06780 PF02325 YGGT family ABIV_RS06785 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABIV_RS06790 PF05193 Peptidase M16 inactive domain ABIV_RS06795 PF04055 Radical SAM superfamily ABIV_RS06800 PF01103 Surface antigen ABIV_RS06800 PF07244 Surface antigen variable number repeat ABIV_RS06805 PF01842 ACT domain ABIV_RS06805 PF02153 Prephenate dehydrogenase ABIV_RS06810 PF00809 Pterin binding enzyme ABIV_RS06825 PF01842 ACT domain ABIV_RS06825 PF00696 Amino acid kinase family ABIV_RS06825 PF13840 ACT domain ABIV_RS06830 PF00293 NUDIX domain ABIV_RS06835 PF06969 HemN C-terminal domain ABIV_RS06835 PF04055 Radical SAM superfamily ABIV_RS06840 PF05175 Methyltransferase small domain ABIV_RS06840 PF17827 PrmC N-terminal domain ABIV_RS06845 PF01432 Peptidase family M3 ABIV_RS06860 PF00589 Phage integrase family ABIV_RS06860 PF18644 Phage integrase SAM-like domain ABIV_RS06865 PF00072 Response regulator receiver domain ABIV_RS06865 PF01339 CheB methylesterase ABIV_RS06870 PF03975 CheD chemotactic sensory transduction ABIV_RS06875 PF01739 CheR methyltransferase, SAM binding domain ABIV_RS06875 PF03705 CheR methyltransferase, all-alpha domain ABIV_RS06880 PF09078 CheY binding ABIV_RS06880 PF02895 Signal transducing histidine kinase, homodimeric domain ABIV_RS06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS06880 PF01627 Hpt domain ABIV_RS06880 PF01584 CheW-like domain ABIV_RS06885 PF00072 Response regulator receiver domain ABIV_RS06890 PF01138 3' exoribonuclease family, domain 1 ABIV_RS06890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABIV_RS06890 PF00013 KH domain ABIV_RS06890 PF00575 S1 RNA binding domain ABIV_RS06890 PF03725 3' exoribonuclease family, domain 2 ABIV_RS06900 PF04453 LPS transport system D ABIV_RS06900 PF03968 OstA-like protein ABIV_RS06910 PF02844 Phosphoribosylglycinamide synthetase, N domain ABIV_RS06910 PF02843 Phosphoribosylglycinamide synthetase, C domain ABIV_RS06910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABIV_RS06915 PF00916 Sulfate permease family ABIV_RS06915 PF01740 STAS domain ABIV_RS06920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABIV_RS06920 PF01926 50S ribosome-binding GTPase ABIV_RS06925 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ABIV_RS06925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABIV_RS06930 PF17854 FtsK alpha domain ABIV_RS06930 PF09397 Ftsk gamma domain ABIV_RS06930 PF01580 FtsK/SpoIIIE family ABIV_RS06935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABIV_RS06935 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS06940 PF10369 Small subunit of acetolactate synthase ABIV_RS06945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABIV_RS06945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABIV_RS06945 PF00205 Thiamine pyrophosphate enzyme, central domain ABIV_RS06955 PF02541 Ppx/GppA phosphatase family ABIV_RS06960 PF01066 CDP-alcohol phosphatidyltransferase ABIV_RS06965 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS06965 PF17158 Membrane-associated sensor, integral membrane domain ABIV_RS06970 PF01740 STAS domain ABIV_RS06970 PF00916 Sulfate permease family ABIV_RS06985 PF00085 Thioredoxin ABIV_RS06990 PF04463 Protein of unknown function (DUF523) ABIV_RS06995 PF01171 PP-loop family ABIV_RS07005 PF18030 RimK PreATP-grasp domain ABIV_RS07005 PF08443 RimK-like ATP-grasp domain ABIV_RS07020 PF00171 Aldehyde dehydrogenase family ABIV_RS07035 PF07681 DoxX ABIV_RS07040 PF00005 ABC transporter ABIV_RS07045 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABIV_RS07045 PF00005 ABC transporter ABIV_RS07050 PF11862 Domain of unknown function (DUF3382) ABIV_RS07050 PF02653 Branched-chain amino acid transport system / permease component ABIV_RS07055 PF02653 Branched-chain amino acid transport system / permease component ABIV_RS07145 PF00174 Oxidoreductase molybdopterin binding domain ABIV_RS07150 PF00994 Probable molybdopterin binding domain ABIV_RS07150 PF03454 MoeA C-terminal region (domain IV) ABIV_RS07150 PF03453 MoeA N-terminal region (domain I and II) ABIV_RS07155 PF00892 EamA-like transporter family ABIV_RS07165 PF02646 RmuC family ABIV_RS07170 PF01435 Peptidase family M48 ABIV_RS07170 PF16491 CAAX prenyl protease N-terminal, five membrane helices ABIV_RS07175 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS07180 PF03061 Thioesterase superfamily ABIV_RS07185 PF00589 Phage integrase family ABIV_RS07215 PF01434 Peptidase family M41 ABIV_RS07215 PF17862 AAA+ lid domain ABIV_RS07215 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS07245 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS07260 PF04023 FeoA domain ABIV_RS07265 PF07664 Ferrous iron transport protein B C terminus ABIV_RS07265 PF17910 FeoB cytosolic helical domain ABIV_RS07265 PF04023 FeoA domain ABIV_RS07265 PF02421 Ferrous iron transport protein B ABIV_RS07265 PF07670 Nucleoside recognition ABIV_RS07275 PF00248 Aldo/keto reductase family ABIV_RS07300 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABIV_RS07300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABIV_RS07315 PF00881 Nitroreductase family ABIV_RS07320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS07335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABIV_RS07335 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABIV_RS07350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS07350 PF14824 Sirohaem biosynthesis protein central ABIV_RS07350 PF10414 Sirohaem synthase dimerisation region ABIV_RS07355 PF01888 CbiD ABIV_RS07360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS07365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS07370 PF11760 Cobalamin synthesis G N-terminal ABIV_RS07370 PF11761 Cobalamin biosynthesis central region ABIV_RS07370 PF01890 Cobalamin synthesis G C-terminus ABIV_RS07375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS07385 PF00155 Aminotransferase class I and II ABIV_RS07390 PF03186 CobD/Cbib protein ABIV_RS07395 PF00891 O-methyltransferase domain ABIV_RS07400 PF01032 FecCD transport family ABIV_RS07405 PF00005 ABC transporter ABIV_RS07415 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS07415 PF00593 TonB dependent receptor ABIV_RS07435 PF02310 B12 binding domain ABIV_RS07440 PF06368 Methylaspartate mutase E chain (MutE) ABIV_RS07450 PF13193 AMP-binding enzyme C-terminal domain ABIV_RS07450 PF00501 AMP-binding enzyme ABIV_RS07460 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS07460 PF08448 PAS fold ABIV_RS07475 PF11066 Protein of unknown function (DUF2867) ABIV_RS07475 PF13460 NAD(P)H-binding ABIV_RS07480 PF00873 AcrB/AcrD/AcrF family ABIV_RS07490 PF01795 MraW methylase family ABIV_RS07500 PF00216 Bacterial DNA-binding protein ABIV_RS07510 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS07510 PF02743 Cache domain ABIV_RS07520 PF00669 Bacterial flagellin N-terminal helical region ABIV_RS07520 PF00700 Bacterial flagellin C-terminal helical region ABIV_RS07530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABIV_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS07545 PF00072 Response regulator receiver domain ABIV_RS07545 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS07560 PF00664 ABC transporter transmembrane region ABIV_RS07560 PF00005 ABC transporter ABIV_RS07575 PF04231 Endonuclease I ABIV_RS07585 PF03548 Outer membrane lipoprotein carrier protein LolA ABIV_RS07590 PF02810 SEC-C motif ABIV_RS07590 PF07516 SecA Wing and Scaffold domain ABIV_RS07590 PF00271 Helicase conserved C-terminal domain ABIV_RS07590 PF07517 SecA DEAD-like domain ABIV_RS07590 PF01043 SecA preprotein cross-linking domain ABIV_RS07595 PF02687 FtsX-like permease family ABIV_RS07595 PF12704 MacB-like periplasmic core domain ABIV_RS07610 PF03971 Monomeric isocitrate dehydrogenase ABIV_RS07615 PF00056 lactate/malate dehydrogenase, NAD binding domain ABIV_RS07615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABIV_RS07630 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABIV_RS07630 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABIV_RS07640 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABIV_RS07640 PF01266 FAD dependent oxidoreductase ABIV_RS07650 PF01556 DnaJ C terminal domain ABIV_RS07650 PF00684 DnaJ central domain ABIV_RS07650 PF00226 DnaJ domain ABIV_RS07655 PF13411 MerR HTH family regulatory protein ABIV_RS07660 PF12327 FtsZ family, C-terminal domain ABIV_RS07660 PF00091 Tubulin/FtsZ family, GTPase domain ABIV_RS07665 PF02491 SHS2 domain inserted in FTSA ABIV_RS07675 PF14490 Helix-hairpin-helix containing domain ABIV_RS07675 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ABIV_RS07675 PF13538 UvrD-like helicase C-terminal domain ABIV_RS07695 PF01312 FlhB HrpN YscU SpaS Family ABIV_RS07705 PF00905 Penicillin binding protein transpeptidase domain ABIV_RS07705 PF03717 Penicillin-binding Protein dimerisation domain ABIV_RS07710 PF00813 FliP family ABIV_RS07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS07715 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS07715 PF00989 PAS fold ABIV_RS07735 PF00873 AcrB/AcrD/AcrF family ABIV_RS07740 PF00873 AcrB/AcrD/AcrF family ABIV_RS07745 PF08448 PAS fold ABIV_RS07745 PF08447 PAS fold ABIV_RS07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS07755 PF01926 50S ribosome-binding GTPase ABIV_RS07775 PF00475 Imidazoleglycerol-phosphate dehydratase ABIV_RS07780 PF03330 Lytic transglycolase ABIV_RS07780 PF05036 Sporulation related domain ABIV_RS07785 PF01476 LysM domain ABIV_RS07785 PF01464 Transglycosylase SLT domain ABIV_RS07790 PF01026 TatD related DNase ABIV_RS07800 PF07724 AAA domain (Cdc48 subfamily) ABIV_RS07800 PF10431 C-terminal, D2-small domain, of ClpB protein ABIV_RS07805 PF00227 Proteasome subunit ABIV_RS07810 PF03948 Ribosomal protein L9, C-terminal domain ABIV_RS07810 PF01281 Ribosomal protein L9, N-terminal domain ABIV_RS07825 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS07825 PF00072 Response regulator receiver domain ABIV_RS07840 PF02441 Flavoprotein ABIV_RS07845 PF01467 Cytidylyltransferase-like ABIV_RS07850 PF02223 Thymidylate kinase ABIV_RS07855 PF03129 Anticodon binding domain ABIV_RS07855 PF13393 Histidyl-tRNA synthetase ABIV_RS07860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABIV_RS07860 PF17810 Arginine decarboxylase helical bundle domain ABIV_RS07860 PF17944 Arginine decarboxylase C-terminal helical extension ABIV_RS07865 PF06426 Serine acetyltransferase, N-terminal ABIV_RS07865 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS07870 PF01925 Sulfite exporter TauE/SafE ABIV_RS07875 PF00694 Aconitase C-terminal domain ABIV_RS07875 PF00330 Aconitase family (aconitate hydratase) ABIV_RS07880 PF00005 ABC transporter ABIV_RS07880 PF17755 UvrA DNA-binding domain ABIV_RS07880 PF17760 UvrA interaction domain ABIV_RS07890 PF01595 Cyclin M transmembrane N-terminal domain ABIV_RS07890 PF03471 Transporter associated domain ABIV_RS07890 PF00571 CBS domain ABIV_RS07905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABIV_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS07915 PF00005 ABC transporter ABIV_RS07915 PF00571 CBS domain ABIV_RS07950 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS07950 PF00563 EAL domain ABIV_RS07950 PF08448 PAS fold ABIV_RS07960 PF07690 Major Facilitator Superfamily ABIV_RS07965 PF17785 PUA-like domain ABIV_RS07965 PF10672 S-adenosylmethionine-dependent methyltransferase ABIV_RS07970 PF03449 Transcription elongation factor, N-terminal ABIV_RS07970 PF01272 Transcription elongation factor, GreA/GreB, C-term ABIV_RS07980 PF03749 Sugar fermentation stimulation protein RE domain ABIV_RS07980 PF17746 SfsA N-terminal OB domain ABIV_RS08000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABIV_RS08000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABIV_RS08005 PF09339 IclR helix-turn-helix domain ABIV_RS08005 PF01614 Bacterial transcriptional regulator ABIV_RS08010 PF01965 DJ-1/PfpI family ABIV_RS08025 PF00270 DEAD/DEAH box helicase ABIV_RS08025 PF00271 Helicase conserved C-terminal domain ABIV_RS08030 PF00561 alpha/beta hydrolase fold ABIV_RS08075 PF01906 Putative heavy-metal-binding ABIV_RS08100 PF01638 HxlR-like helix-turn-helix ABIV_RS08105 PF02525 Flavodoxin-like fold ABIV_RS08110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABIV_RS08110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABIV_RS08120 PF00849 RNA pseudouridylate synthase ABIV_RS08125 PF14493 Helix-turn-helix domain ABIV_RS08125 PF05970 PIF1-like helicase ABIV_RS08140 PF02540 NAD synthase ABIV_RS08140 PF00958 GMP synthase C terminal domain ABIV_RS08140 PF00117 Glutamine amidotransferase class-I ABIV_RS08145 PF03600 Citrate transporter ABIV_RS08150 PF00890 FAD binding domain ABIV_RS08165 PF00155 Aminotransferase class I and II ABIV_RS08170 PF16916 Dimerisation domain of Zinc Transporter ABIV_RS08170 PF01545 Cation efflux family ABIV_RS08200 PF16326 ABC transporter C-terminal domain ABIV_RS08200 PF00005 ABC transporter ABIV_RS08200 PF12848 ABC transporter ABIV_RS08205 PF09424 Yqey-like protein ABIV_RS08210 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS08215 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS08215 PF00072 Response regulator receiver domain ABIV_RS08220 PF02203 Tar ligand binding domain homologue ABIV_RS08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS08220 PF00672 HAMP domain ABIV_RS08260 PF00106 short chain dehydrogenase ABIV_RS08265 PF03553 Na+/H+ antiporter family ABIV_RS08270 PF13426 PAS domain ABIV_RS08270 PF00563 EAL domain ABIV_RS08270 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS08275 PF12911 N-terminal TM domain of oligopeptide transport permease C ABIV_RS08275 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS08300 PF12072 Domain of unknown function (DUF3552) ABIV_RS08300 PF01966 HD domain ABIV_RS08300 PF00013 KH domain ABIV_RS08310 PF00578 AhpC/TSA family ABIV_RS08315 PF00448 SRP54-type protein, GTPase domain ABIV_RS08325 PF00072 Response regulator receiver domain ABIV_RS08325 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS08330 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS08330 PF13426 PAS domain ABIV_RS08330 PF00672 HAMP domain ABIV_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS08335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABIV_RS08340 PF16226 Domain of unknown function (DUF4885) ABIV_RS08350 PF05728 Uncharacterised protein family (UPF0227) ABIV_RS08365 PF18073 Rubredoxin metal binding domain ABIV_RS08375 PF02130 Uncharacterized protein family UPF0054 ABIV_RS08380 PF01699 Sodium/calcium exchanger protein ABIV_RS08390 PF00210 Ferritin-like domain ABIV_RS08395 PF02915 Rubrerythrin ABIV_RS08405 PF03023 Lipid II flippase MurJ ABIV_RS08410 PF00664 ABC transporter transmembrane region ABIV_RS08410 PF00005 ABC transporter ABIV_RS08415 PF01180 Dihydroorotate dehydrogenase ABIV_RS08425 PF00701 Dihydrodipicolinate synthetase family ABIV_RS08435 PF01066 CDP-alcohol phosphatidyltransferase ABIV_RS08440 PF17820 PDZ domain ABIV_RS08440 PF02163 Peptidase family M50 ABIV_RS08445 PF01168 Alanine racemase, N-terminal domain ABIV_RS08465 PF00218 Indole-3-glycerol phosphate synthase ABIV_RS08475 PF03692 Putative zinc- or iron-chelating domain ABIV_RS08480 PF05175 Methyltransferase small domain ABIV_RS08490 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABIV_RS08490 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABIV_RS08490 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABIV_RS08495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABIV_RS08495 PF00205 Thiamine pyrophosphate enzyme, central domain ABIV_RS08495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABIV_RS08505 PF00893 Small Multidrug Resistance protein ABIV_RS08515 PF13291 ACT domain ABIV_RS08515 PF02824 TGS domain ABIV_RS08515 PF04607 Region found in RelA / SpoT proteins ABIV_RS08520 PF00929 Exonuclease ABIV_RS08520 PF02811 PHP domain ABIV_RS08520 PF14579 Helix-hairpin-helix motif ABIV_RS08520 PF14480 DNA polymerase III polC-type N-terminus I ABIV_RS08520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABIV_RS08520 PF11490 DNA polymerase III polC-type N-terminus II ABIV_RS08520 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABIV_RS08525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABIV_RS08530 PF00834 Ribulose-phosphate 3 epimerase family ABIV_RS08535 PF02470 MlaD protein ABIV_RS08540 PF04403 Paraquat-inducible protein A ABIV_RS08550 PF00529 HlyD membrane-fusion protein of T1SS ABIV_RS08550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABIV_RS08555 PF00873 AcrB/AcrD/AcrF family ABIV_RS08565 PF02253 Phospholipase A1 ABIV_RS08570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABIV_RS08575 PF01810 LysE type translocator ABIV_RS08580 PF07885 Ion channel ABIV_RS08595 PF01554 MatE ABIV_RS08600 PF17805 AsnC-like ligand binding domain ABIV_RS08605 PF12833 Helix-turn-helix domain ABIV_RS08605 PF02311 AraC-like ligand binding domain ABIV_RS08610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABIV_RS08620 PF13186 Iron-sulfur cluster-binding domain ABIV_RS08620 PF04055 Radical SAM superfamily ABIV_RS08635 PF02581 Thiamine monophosphate synthase ABIV_RS08635 PF08543 Phosphomethylpyrimidine kinase ABIV_RS08640 PF00293 NUDIX domain ABIV_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS08655 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS08655 PF00072 Response regulator receiver domain ABIV_RS08660 PF11849 Domain of unknown function (DUF3369) ABIV_RS08665 PF04461 Protein of unknown function (DUF520) ABIV_RS08670 PF00860 Permease family ABIV_RS08690 PF04241 Protein of unknown function (DUF423) ABIV_RS08700 PF00156 Phosphoribosyl transferase domain ABIV_RS08705 PF00860 Permease family ABIV_RS08710 PF00155 Aminotransferase class I and II ABIV_RS08715 PF12833 Helix-turn-helix domain ABIV_RS08720 PF00672 HAMP domain ABIV_RS08720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS08720 PF02203 Tar ligand binding domain homologue ABIV_RS08725 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS08725 PF00563 EAL domain ABIV_RS08725 PF01590 GAF domain ABIV_RS08725 PF00360 Phytochrome region ABIV_RS08730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABIV_RS08735 PF01894 Uncharacterised protein family UPF0047 ABIV_RS08750 PF12833 Helix-turn-helix domain ABIV_RS08760 PF01022 Bacterial regulatory protein, arsR family ABIV_RS08765 PF00403 Heavy-metal-associated domain ABIV_RS08770 PF12706 Beta-lactamase superfamily domain ABIV_RS08775 PF14602 Hexapeptide repeat of succinyl-transferase ABIV_RS08775 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ABIV_RS08780 PF17764 3′ DNA-binding domain (3′BD) ABIV_RS08780 PF00270 DEAD/DEAH box helicase ABIV_RS08780 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABIV_RS08780 PF18074 Primosomal protein N C-terminal domain ABIV_RS08780 PF00271 Helicase conserved C-terminal domain ABIV_RS08805 PF00005 ABC transporter ABIV_RS08810 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABIV_RS08810 PF00005 ABC transporter ABIV_RS08815 PF02653 Branched-chain amino acid transport system / permease component ABIV_RS08815 PF11862 Domain of unknown function (DUF3382) ABIV_RS08820 PF02653 Branched-chain amino acid transport system / permease component ABIV_RS08830 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ABIV_RS08835 PF00378 Enoyl-CoA hydratase/isomerase ABIV_RS08835 PF00551 Formyl transferase ABIV_RS08835 PF02911 Formyl transferase, C-terminal domain ABIV_RS08840 PF02769 AIR synthase related protein, C-terminal domain ABIV_RS08840 PF00586 AIR synthase related protein, N-terminal domain ABIV_RS08845 PF01924 Hydrogenase formation hypA family ABIV_RS08850 PF01455 HupF/HypC family ABIV_RS08855 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABIV_RS08865 PF12823 Domain of unknown function (DUF3817) ABIV_RS08870 PF00672 HAMP domain ABIV_RS08870 PF02203 Tar ligand binding domain homologue ABIV_RS08870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS08880 PF00209 Sodium:neurotransmitter symporter family ABIV_RS08890 PF17788 HypF Kae1-like domain ABIV_RS08890 PF01300 Telomere recombination ABIV_RS08890 PF07503 HypF finger ABIV_RS08890 PF00708 Acylphosphatase ABIV_RS08900 PF01750 Hydrogenase maturation protease ABIV_RS08905 PF01292 Prokaryotic cytochrome b561 ABIV_RS08910 PF00374 Nickel-dependent hydrogenase ABIV_RS08915 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABIV_RS08915 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABIV_RS08915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABIV_RS08925 PF01750 Hydrogenase maturation protease ABIV_RS08930 PF01292 Prokaryotic cytochrome b561 ABIV_RS08935 PF00374 Nickel-dependent hydrogenase ABIV_RS08940 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABIV_RS08940 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABIV_RS08940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABIV_RS08950 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABIV_RS08950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABIV_RS08960 PF11791 Aconitate B N-terminal domain ABIV_RS08960 PF06434 Aconitate hydratase 2 N-terminus ABIV_RS08960 PF00330 Aconitase family (aconitate hydratase) ABIV_RS08970 PF00892 EamA-like transporter family ABIV_RS08980 PF01709 Transcriptional regulator ABIV_RS08985 PF01551 Peptidase family M23 ABIV_RS08990 PF04333 MlaA lipoprotein ABIV_RS09005 PF03641 Possible lysine decarboxylase ABIV_RS09015 PF13419 Haloacid dehalogenase-like hydrolase ABIV_RS09020 PF00155 Aminotransferase class I and II ABIV_RS09045 PF08534 Redoxin ABIV_RS09050 PF02600 Disulfide bond formation protein DsbB ABIV_RS09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS09060 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS09070 PF01966 HD domain ABIV_RS09080 PF06865 Pyrimidine/purine nucleoside phosphorylase ABIV_RS09095 PF01926 50S ribosome-binding GTPase ABIV_RS09095 PF06071 Protein of unknown function (DUF933) ABIV_RS09100 PF00072 Response regulator receiver domain ABIV_RS09100 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS09105 PF01467 Cytidylyltransferase-like ABIV_RS09105 PF00294 pfkB family carbohydrate kinase ABIV_RS09110 PF00883 Cytosol aminopeptidase family, catalytic domain ABIV_RS09110 PF02789 Cytosol aminopeptidase family, N-terminal domain ABIV_RS09120 PF00291 Pyridoxal-phosphate dependent enzyme ABIV_RS09125 PF00156 Phosphoribosyl transferase domain ABIV_RS09130 PF08645 Polynucleotide kinase 3 phosphatase ABIV_RS09140 PF00772 DnaB-like helicase N terminal domain ABIV_RS09140 PF03796 DnaB-like helicase C terminal domain ABIV_RS09145 PF04551 GcpE protein ABIV_RS09155 PF01336 OB-fold nucleic acid binding domain ABIV_RS09155 PF00152 tRNA synthetases class II (D, K and N) ABIV_RS09160 PF00464 Serine hydroxymethyltransferase ABIV_RS09170 PF00425 chorismate binding enzyme ABIV_RS09170 PF04715 Anthranilate synthase component I, N terminal region ABIV_RS09175 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABIV_RS09180 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABIV_RS09190 PF00696 Amino acid kinase family ABIV_RS09195 PF01192 RNA polymerase Rpb6 ABIV_RS09200 PF04607 Region found in RelA / SpoT proteins ABIV_RS09200 PF02824 TGS domain ABIV_RS09200 PF13291 ACT domain ABIV_RS09205 PF00579 tRNA synthetases class I (W and Y) ABIV_RS09215 PF01520 N-acetylmuramoyl-L-alanine amidase ABIV_RS09215 PF11741 AMIN domain ABIV_RS09230 PF01195 Peptidyl-tRNA hydrolase ABIV_RS09235 PF14693 Ribosomal protein TL5, C-terminal domain ABIV_RS09235 PF01386 Ribosomal L25p family ABIV_RS09245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABIV_RS09245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABIV_RS09250 PF10502 Signal peptidase, peptidase S26 ABIV_RS09255 PF02502 Ribose/Galactose Isomerase ABIV_RS09295 PF00633 Helix-hairpin-helix motif ABIV_RS09295 PF00730 HhH-GPD superfamily base excision DNA repair protein ABIV_RS09295 PF10576 Iron-sulfur binding domain of endonuclease III ABIV_RS09305 PF17757 UvrB interaction domain ABIV_RS09305 PF12344 Ultra-violet resistance protein B ABIV_RS09305 PF02151 UvrB/uvrC motif ABIV_RS09305 PF04851 Type III restriction enzyme, res subunit ABIV_RS09305 PF00271 Helicase conserved C-terminal domain ABIV_RS09320 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABIV_RS09320 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABIV_RS09325 PF03449 Transcription elongation factor, N-terminal ABIV_RS09325 PF01272 Transcription elongation factor, GreA/GreB, C-term ABIV_RS09330 PF00899 ThiF family ABIV_RS09335 PF00072 Response regulator receiver domain ABIV_RS09335 PF01584 CheW-like domain ABIV_RS09340 PF14698 Argininosuccinate lyase C-terminal ABIV_RS09340 PF00206 Lyase ABIV_RS09345 PF01106 NifU-like domain ABIV_RS09345 PF01592 NifU-like N terminal domain ABIV_RS09345 PF04324 BFD-like [2Fe-2S] binding domain ABIV_RS09350 PF00266 Aminotransferase class-V ABIV_RS09355 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABIV_RS09360 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS09370 PF01458 Uncharacterized protein family (UPF0051) ABIV_RS09375 PF00005 ABC transporter ABIV_RS09380 PF01458 Uncharacterized protein family (UPF0051) ABIV_RS09385 PF00266 Aminotransferase class-V ABIV_RS09390 PF02657 Fe-S metabolism associated domain ABIV_RS09395 PF01883 Iron-sulfur cluster assembly protein ABIV_RS09405 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS09405 PF10442 FIST C domain ABIV_RS09405 PF00563 EAL domain ABIV_RS09405 PF08495 FIST N domain ABIV_RS09420 PF00873 AcrB/AcrD/AcrF family ABIV_RS09425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABIV_RS09435 PF00440 Bacterial regulatory proteins, tetR family ABIV_RS09435 PF16295 Tetracyclin repressor-like, C-terminal domain ABIV_RS09440 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABIV_RS09450 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS09450 PF00989 PAS fold ABIV_RS09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS09455 PF12833 Helix-turn-helix domain ABIV_RS09455 PF00072 Response regulator receiver domain ABIV_RS09460 PF18764 Nitrous oxide reductase propeller repeat ABIV_RS09460 PF13473 Cupredoxin-like domain ABIV_RS09460 PF18793 Nitrous oxide reductase propeller repeat 2 ABIV_RS09475 PF12800 4Fe-4S binding domain ABIV_RS09475 PF12838 4Fe-4S dicluster domain ABIV_RS09490 PF12801 4Fe-4S binding domain ABIV_RS09490 PF13237 4Fe-4S dicluster domain ABIV_RS09495 PF00005 ABC transporter ABIV_RS09515 PF01053 Cys/Met metabolism PLP-dependent enzyme ABIV_RS09520 PF01053 Cys/Met metabolism PLP-dependent enzyme ABIV_RS09530 PF03824 High-affinity nickel-transport protein ABIV_RS09545 PF06965 Na+/H+ antiporter 1 ABIV_RS09560 PF02630 SCO1/SenC ABIV_RS09565 PF02311 AraC-like ligand binding domain ABIV_RS09565 PF12833 Helix-turn-helix domain ABIV_RS09580 PF00375 Sodium:dicarboxylate symporter family ABIV_RS09605 PF00137 ATP synthase subunit C ABIV_RS09610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABIV_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS09620 PF12911 N-terminal TM domain of oligopeptide transport permease C ABIV_RS09620 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS09625 PF00005 ABC transporter ABIV_RS09630 PF00005 ABC transporter ABIV_RS09640 PF05661 Protein of unknown function (DUF808) ABIV_RS09650 PF02743 Cache domain ABIV_RS09650 PF00672 HAMP domain ABIV_RS09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS09660 PF00141 Peroxidase ABIV_RS09665 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS09680 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS09685 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS09685 PF08448 PAS fold ABIV_RS09690 PF00005 ABC transporter ABIV_RS09730 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS09730 PF00072 Response regulator receiver domain ABIV_RS09735 PF01475 Ferric uptake regulator family ABIV_RS09760 PF04116 Fatty acid hydroxylase superfamily ABIV_RS09765 PF03150 Di-haem cytochrome c peroxidase ABIV_RS09775 PF08443 RimK-like ATP-grasp domain ABIV_RS09775 PF18030 RimK PreATP-grasp domain ABIV_RS09790 PF00258 Flavodoxin ABIV_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS09815 PF00072 Response regulator receiver domain ABIV_RS09815 PF09308 LuxQ, periplasmic ABIV_RS09815 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS09825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABIV_RS09825 PF00005 ABC transporter ABIV_RS09830 PF00762 Ferrochelatase ABIV_RS09845 PF01875 Memo-like protein ABIV_RS09850 PF02698 DUF218 domain ABIV_RS09855 PF00005 ABC transporter ABIV_RS09860 PF00950 ABC 3 transport family ABIV_RS09865 PF17783 CvfB-like winged helix domain ABIV_RS09865 PF13509 S1 domain ABIV_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS09870 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS09870 PF00672 HAMP domain ABIV_RS09870 PF01627 Hpt domain ABIV_RS09870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABIV_RS09870 PF00072 Response regulator receiver domain ABIV_RS09875 PF08534 Redoxin ABIV_RS09880 PF00174 Oxidoreductase molybdopterin binding domain ABIV_RS09885 PF01794 Ferric reductase like transmembrane component ABIV_RS09925 PF00664 ABC transporter transmembrane region ABIV_RS09925 PF03412 Peptidase C39 family ABIV_RS09925 PF00005 ABC transporter ABIV_RS09935 PF00072 Response regulator receiver domain ABIV_RS09935 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS09980 PF01048 Phosphorylase superfamily ABIV_RS09985 PF00698 Acyl transferase domain ABIV_RS09990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABIV_RS10000 PF00691 OmpA family ABIV_RS10010 PF08338 Domain of unknown function (DUF1731) ABIV_RS10010 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS10015 PF04397 LytTr DNA-binding domain ABIV_RS10015 PF00072 Response regulator receiver domain ABIV_RS10020 PF06580 Histidine kinase ABIV_RS10020 PF07694 5TMR of 5TMR-LYT ABIV_RS10030 PF03441 FAD binding domain of DNA photolyase ABIV_RS10030 PF00875 DNA photolyase ABIV_RS10040 PF04052 TolB amino-terminal domain ABIV_RS10050 PF02472 Biopolymer transport protein ExbD/TolR ABIV_RS10055 PF01618 MotA/TolQ/ExbB proton channel family ABIV_RS10060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABIV_RS10065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABIV_RS10065 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABIV_RS10070 PF00231 ATP synthase ABIV_RS10075 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABIV_RS10075 PF00306 ATP synthase alpha/beta chain, C terminal domain ABIV_RS10075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABIV_RS10080 PF00213 ATP synthase delta (OSCP) subunit ABIV_RS10085 PF00430 ATP synthase B/B' CF(0) ABIV_RS10095 PF17762 HTH domain found in ParB protein ABIV_RS10095 PF02195 ParB-like nuclease domain ABIV_RS10100 PF13614 AAA domain ABIV_RS10105 PF08279 HTH domain ABIV_RS10105 PF03099 Biotin/lipoate A/B protein ligase family ABIV_RS10105 PF02237 Biotin protein ligase C terminal domain ABIV_RS10115 PF02911 Formyl transferase, C-terminal domain ABIV_RS10115 PF00551 Formyl transferase ABIV_RS10120 PF00696 Amino acid kinase family ABIV_RS10125 PF01018 GTP1/OBG ABIV_RS10125 PF01926 50S ribosome-binding GTPase ABIV_RS10130 PF01016 Ribosomal L27 protein ABIV_RS10135 PF00829 Ribosomal prokaryotic L21 protein ABIV_RS10140 PF01042 Endoribonuclease L-PSP ABIV_RS10145 PF13662 Toprim domain ABIV_RS10145 PF08275 DNA primase catalytic core, N-terminal domain ABIV_RS10145 PF16730 DnaG-primase C-terminal, helicase-binding domain ABIV_RS10145 PF01807 CHC2 zinc finger ABIV_RS10155 PF00075 RNase H ABIV_RS10160 PF14622 Ribonuclease-III-like ABIV_RS10160 PF00035 Double-stranded RNA binding motif ABIV_RS10165 PF01264 Chorismate synthase ABIV_RS10175 PF02001 Protein of unknown function DUF134 ABIV_RS10180 PF01435 Peptidase family M48 ABIV_RS10195 PF00300 Histidine phosphatase superfamily (branch 1) ABIV_RS10205 PF01926 50S ribosome-binding GTPase ABIV_RS10205 PF12631 MnmE helical domain ABIV_RS10205 PF10396 GTP-binding protein TrmE N-terminus ABIV_RS10215 PF14849 YidC periplasmic domain ABIV_RS10215 PF02096 60Kd inner membrane protein ABIV_RS10220 PF01809 Putative membrane protein insertion efficiency factor ABIV_RS10225 PF00825 Ribonuclease P ABIV_RS10230 PF00468 Ribosomal protein L34 ABIV_RS10235 PF10431 C-terminal, D2-small domain, of ClpB protein ABIV_RS10235 PF17871 AAA lid domain ABIV_RS10235 PF07724 AAA domain (Cdc48 subfamily) ABIV_RS10235 PF02861 Clp amino terminal domain, pathogenicity island component ABIV_RS10235 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS10240 PF00072 Response regulator receiver domain ABIV_RS10240 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS10240 PF13188 PAS domain ABIV_RS10240 PF08448 PAS fold ABIV_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10255 PF01351 Ribonuclease HII ABIV_RS10270 PF12796 Ankyrin repeats (3 copies) ABIV_RS10280 PF01625 Peptide methionine sulfoxide reductase ABIV_RS10285 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABIV_RS10290 PF00293 NUDIX domain ABIV_RS10295 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS10295 PF00072 Response regulator receiver domain ABIV_RS10295 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABIV_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10300 PF03601 Conserved hypothetical protein 698 ABIV_RS10305 PF03466 LysR substrate binding domain ABIV_RS10305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABIV_RS10320 PF02142 MGS-like domain ABIV_RS10320 PF01808 AICARFT/IMPCHase bienzyme ABIV_RS10335 PF01883 Iron-sulfur cluster assembly protein ABIV_RS10350 PF00586 AIR synthase related protein, N-terminal domain ABIV_RS10350 PF02769 AIR synthase related protein, C-terminal domain ABIV_RS10350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABIV_RS10360 PF10145 Phage-related minor tail protein ABIV_RS10360 PF01464 Transglycosylase SLT domain ABIV_RS10360 PF01551 Peptidase family M23 ABIV_RS10365 PF00571 CBS domain ABIV_RS10365 PF03448 MgtE intracellular N domain ABIV_RS10365 PF01769 Divalent cation transporter ABIV_RS10370 PF01227 GTP cyclohydrolase I ABIV_RS10380 PF00437 Type II/IV secretion system protein ABIV_RS10395 PF01926 50S ribosome-binding GTPase ABIV_RS10395 PF07650 KH domain ABIV_RS10405 PF11849 Domain of unknown function (DUF3369) ABIV_RS10415 PF01078 Magnesium chelatase, subunit ChlI ABIV_RS10415 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABIV_RS10420 PF08447 PAS fold ABIV_RS10420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS10425 PF01327 Polypeptide deformylase ABIV_RS10430 PF00574 Clp protease ABIV_RS10435 PF05698 Bacterial trigger factor protein (TF) C-terminus ABIV_RS10435 PF05697 Bacterial trigger factor protein (TF) ABIV_RS10435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABIV_RS10440 PF07584 Aerotolerance regulator N-terminal ABIV_RS10440 PF13519 von Willebrand factor type A domain ABIV_RS10445 PF03976 Polyphosphate kinase 2 (PPK2) ABIV_RS10450 PF03976 Polyphosphate kinase 2 (PPK2) ABIV_RS10455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABIV_RS10460 PF03435 Saccharopine dehydrogenase NADP binding domain ABIV_RS10460 PF16653 Saccharopine dehydrogenase C-terminal domain ABIV_RS10465 PF00202 Aminotransferase class-III ABIV_RS10505 PF00483 Nucleotidyl transferase ABIV_RS10515 PF17158 Membrane-associated sensor, integral membrane domain ABIV_RS10515 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS10525 PF03461 TRCF domain ABIV_RS10525 PF02559 CarD-like/TRCF domain ABIV_RS10525 PF00270 DEAD/DEAH box helicase ABIV_RS10525 PF00271 Helicase conserved C-terminal domain ABIV_RS10525 PF17757 UvrB interaction domain ABIV_RS10595 PF06067 Domain of unknown function (DUF932) ABIV_RS10630 PF12282 Signal transduction histidine kinase ABIV_RS10630 PF07568 Histidine kinase ABIV_RS10630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10635 PF00072 Response regulator receiver domain ABIV_RS10640 PF00593 TonB dependent receptor ABIV_RS10640 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS10665 PF02254 TrkA-N domain ABIV_RS10665 PF00999 Sodium/hydrogen exchanger family ABIV_RS10680 PF01551 Peptidase family M23 ABIV_RS10680 PF04225 Opacity-associated protein A LysM-like domain ABIV_RS10685 PF08245 Mur ligase middle domain ABIV_RS10695 PF13603 Leucyl-tRNA synthetase, Domain 2 ABIV_RS10695 PF09334 tRNA synthetases class I (M) ABIV_RS10695 PF00133 tRNA synthetases class I (I, L, M and V) ABIV_RS10715 PF07549 SecD/SecF GG Motif ABIV_RS10715 PF02355 Protein export membrane protein ABIV_RS10720 PF02355 Protein export membrane protein ABIV_RS10725 PF02699 Preprotein translocase subunit ABIV_RS10735 PF01966 HD domain ABIV_RS10735 PF12627 Probable RNA and SrmB- binding site of polymerase A ABIV_RS10735 PF01743 Poly A polymerase head domain ABIV_RS10740 PF00924 Mechanosensitive ion channel ABIV_RS10740 PF05552 Conserved TM helix ABIV_RS10745 PF04073 Aminoacyl-tRNA editing domain ABIV_RS10745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABIV_RS10745 PF03129 Anticodon binding domain ABIV_RS10750 PF01488 Shikimate / quinate 5-dehydrogenase ABIV_RS10750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABIV_RS10750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABIV_RS10755 PF00348 Polyprenyl synthetase ABIV_RS10765 PF00815 Histidinol dehydrogenase ABIV_RS10770 PF01202 Shikimate kinase ABIV_RS10785 PF02472 Biopolymer transport protein ExbD/TolR ABIV_RS10795 PF00171 Aldehyde dehydrogenase family ABIV_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10805 PF00072 Response regulator receiver domain ABIV_RS10805 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS10810 PF01116 Fructose-bisphosphate aldolase class-II ABIV_RS10820 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS10820 PF00072 Response regulator receiver domain ABIV_RS10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10825 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS10825 PF08521 Two-component sensor kinase N-terminal ABIV_RS10835 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABIV_RS10840 PF00364 Biotin-requiring enzyme ABIV_RS10840 PF00682 HMGL-like ABIV_RS10840 PF02436 Conserved carboxylase domain ABIV_RS10845 PF04277 Oxaloacetate decarboxylase, gamma chain ABIV_RS10865 PF00312 Ribosomal protein S15 ABIV_RS10875 PF06463 Molybdenum Cofactor Synthesis C ABIV_RS10875 PF04055 Radical SAM superfamily ABIV_RS10880 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABIV_RS10885 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS10895 PF00005 ABC transporter ABIV_RS10910 PF02885 Glycosyl transferase family, helical bundle domain ABIV_RS10910 PF00591 Glycosyl transferase family, a/b domain ABIV_RS10920 PF00563 EAL domain ABIV_RS10920 PF10442 FIST C domain ABIV_RS10920 PF08495 FIST N domain ABIV_RS10920 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS10930 PF02403 Seryl-tRNA synthetase N-terminal domain ABIV_RS10930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABIV_RS10945 PF00593 TonB dependent receptor ABIV_RS10945 PF07660 Secretin and TonB N terminus short domain ABIV_RS10945 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS10965 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS10965 PF00989 PAS fold ABIV_RS10970 PF12833 Helix-turn-helix domain ABIV_RS10970 PF00072 Response regulator receiver domain ABIV_RS10975 PF00593 TonB dependent receptor ABIV_RS10975 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS10990 PF01618 MotA/TolQ/ExbB proton channel family ABIV_RS10995 PF01618 MotA/TolQ/ExbB proton channel family ABIV_RS11000 PF02472 Biopolymer transport protein ExbD/TolR ABIV_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11015 PF08447 PAS fold ABIV_RS11015 PF08448 PAS fold ABIV_RS11020 PF11849 Domain of unknown function (DUF3369) ABIV_RS11030 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS11030 PF00593 TonB dependent receptor ABIV_RS11035 PF08021 Siderophore-interacting FAD-binding domain ABIV_RS11035 PF00664 ABC transporter transmembrane region ABIV_RS11035 PF00005 ABC transporter ABIV_RS11035 PF04954 Siderophore-interacting protein ABIV_RS11040 PF00005 ABC transporter ABIV_RS11040 PF00664 ABC transporter transmembrane region ABIV_RS11050 PF07690 Major Facilitator Superfamily ABIV_RS11055 PF02659 Putative manganese efflux pump ABIV_RS11065 PF00579 tRNA synthetases class I (W and Y) ABIV_RS11070 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS11080 PF01634 ATP phosphoribosyltransferase ABIV_RS11085 PF03309 Type III pantothenate kinase ABIV_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11095 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS11095 PF08448 PAS fold ABIV_RS11095 PF00072 Response regulator receiver domain ABIV_RS11095 PF13188 PAS domain ABIV_RS11100 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABIV_RS11100 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABIV_RS11115 PF06738 Putative threonine/serine exporter ABIV_RS11120 PF12821 Threonine/Serine exporter, ThrE ABIV_RS11135 PF00106 short chain dehydrogenase ABIV_RS11150 PF12848 ABC transporter ABIV_RS11150 PF00005 ABC transporter ABIV_RS11165 PF01245 Ribosomal protein L19 ABIV_RS11170 PF01746 tRNA (Guanine-1)-methyltransferase ABIV_RS11180 PF01717 Cobalamin-independent synthase, Catalytic domain ABIV_RS11180 PF08267 Cobalamin-independent synthase, N-terminal domain ABIV_RS11185 PF00291 Pyridoxal-phosphate dependent enzyme ABIV_RS11185 PF13291 ACT domain ABIV_RS11190 PF00119 ATP synthase A chain ABIV_RS11200 PF13361 UvrD-like helicase C-terminal domain ABIV_RS11200 PF00580 UvrD/REP helicase N-terminal domain ABIV_RS11205 PF00072 Response regulator receiver domain ABIV_RS11205 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS11210 PF00696 Amino acid kinase family ABIV_RS11215 PF00291 Pyridoxal-phosphate dependent enzyme ABIV_RS11225 PF00033 Cytochrome b/b6/petB ABIV_RS11225 PF00032 Cytochrome b(C-terminal)/b6/petD ABIV_RS11240 PF04452 RNA methyltransferase ABIV_RS11250 PF03453 MoeA N-terminal region (domain I and II) ABIV_RS11250 PF03454 MoeA C-terminal region (domain IV) ABIV_RS11250 PF00994 Probable molybdopterin binding domain ABIV_RS11255 PF06508 Queuosine biosynthesis protein QueC ABIV_RS11260 PF01242 6-pyruvoyl tetrahydropterin synthase ABIV_RS11275 PF00550 Phosphopantetheine attachment site ABIV_RS11280 PF02801 Beta-ketoacyl synthase, C-terminal domain ABIV_RS11280 PF00109 Beta-ketoacyl synthase, N-terminal domain ABIV_RS11285 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABIV_RS11290 PF01230 HIT domain ABIV_RS11295 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABIV_RS11295 PF01409 tRNA synthetases class II core domain (F) ABIV_RS11300 PF03147 Ferredoxin-fold anticodon binding domain ABIV_RS11300 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABIV_RS11300 PF03484 tRNA synthetase B5 domain ABIV_RS11300 PF01588 Putative tRNA binding domain ABIV_RS11305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABIV_RS11310 PF02401 LytB protein ABIV_RS11315 PF00575 S1 RNA binding domain ABIV_RS11320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABIV_RS11320 PF01842 ACT domain ABIV_RS11320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABIV_RS11325 PF01132 Elongation factor P (EF-P) OB domain ABIV_RS11325 PF08207 Elongation factor P (EF-P) KOW-like domain ABIV_RS11325 PF09285 Elongation factor P, C-terminal ABIV_RS11330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABIV_RS11330 PF01872 RibD C-terminal domain ABIV_RS11335 PF02576 RimP N-terminal domain ABIV_RS11340 PF02033 Ribosome-binding factor A ABIV_RS11345 PF00009 Elongation factor Tu GTP binding domain ABIV_RS11345 PF11987 Translation-initiation factor 2 ABIV_RS11345 PF04760 Translation initiation factor IF-2, N-terminal region ABIV_RS11355 PF08544 GHMP kinases C terminal ABIV_RS11355 PF00288 GHMP kinases N terminal domain ABIV_RS11365 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABIV_RS11370 PF01476 LysM domain ABIV_RS11370 PF01551 Peptidase family M23 ABIV_RS11380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABIV_RS11380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABIV_RS11385 PF02445 Quinolinate synthetase A protein ABIV_RS11390 PF02660 Glycerol-3-phosphate acyltransferase ABIV_RS11400 PF05538 Campylobacter major outer membrane protein ABIV_RS11410 PF00472 RF-1 domain ABIV_RS11410 PF03462 PCRF domain ABIV_RS11415 PF05538 Campylobacter major outer membrane protein ABIV_RS11440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABIV_RS11440 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ABIV_RS11455 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABIV_RS11460 PF01668 SmpB protein ABIV_RS11465 PF00288 GHMP kinases N terminal domain ABIV_RS11470 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABIV_RS11475 PF00580 UvrD/REP helicase N-terminal domain ABIV_RS11475 PF13361 UvrD-like helicase C-terminal domain ABIV_RS11480 PF03466 LysR substrate binding domain ABIV_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABIV_RS11485 PF04055 Radical SAM superfamily ABIV_RS11485 PF16199 Radical_SAM C-terminal domain ABIV_RS11490 PF13537 Glutamine amidotransferase domain ABIV_RS11490 PF00156 Phosphoribosyl transferase domain ABIV_RS11495 PF05173 Dihydrodipicolinate reductase, C-terminus ABIV_RS11495 PF01113 Dihydrodipicolinate reductase, N-terminus ABIV_RS11500 PF00085 Thioredoxin ABIV_RS11505 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS11510 PF01235 Sodium:alanine symporter family ABIV_RS11520 PF00085 Thioredoxin ABIV_RS11525 PF01411 tRNA synthetases class II (A) ABIV_RS11525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABIV_RS11525 PF02272 DHHA1 domain ABIV_RS11535 PF00877 NlpC/P60 family ABIV_RS11555 PF02545 Maf-like protein ABIV_RS11560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABIV_RS11560 PF02779 Transketolase, pyrimidine binding domain ABIV_RS11560 PF02780 Transketolase, C-terminal domain ABIV_RS11565 PF00155 Aminotransferase class I and II ABIV_RS11570 PF01842 ACT domain ABIV_RS11570 PF01817 Chorismate mutase type II ABIV_RS11570 PF00800 Prephenate dehydratase ABIV_RS11575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABIV_RS11575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABIV_RS11585 PF00121 Triosephosphate isomerase ABIV_RS11590 PF00162 Phosphoglycerate kinase ABIV_RS11595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABIV_RS11595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABIV_RS11600 PF01467 Cytidylyltransferase-like ABIV_RS11610 PF00750 tRNA synthetases class I (R) ABIV_RS11610 PF05746 DALR anticodon binding domain ABIV_RS11610 PF03485 Arginyl tRNA synthetase N terminal domain ABIV_RS11615 PF02416 mttA/Hcf106 family ABIV_RS11620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABIV_RS11625 PF01553 Acyltransferase ABIV_RS11640 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABIV_RS11645 PF01259 SAICAR synthetase ABIV_RS11650 PF03572 Peptidase family S41 ABIV_RS11650 PF13180 PDZ domain ABIV_RS11660 PF15437 Plasminogen-binding protein pgbA C-terminal ABIV_RS11665 PF01142 tRNA pseudouridine synthase D (TruD) ABIV_RS11680 PF13493 Domain of unknown function (DUF4118) ABIV_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11680 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS11680 PF02702 Osmosensitive K+ channel His kinase sensor domain ABIV_RS11695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABIV_RS11695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABIV_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS11710 PF00005 ABC transporter ABIV_RS11710 PF08402 TOBE domain ABIV_RS11715 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABIV_RS11730 PF03459 TOBE domain ABIV_RS11735 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABIV_RS11740 PF00365 Phosphofructokinase ABIV_RS11745 PF01594 AI-2E family transporter ABIV_RS11755 PF02254 TrkA-N domain ABIV_RS11755 PF00999 Sodium/hydrogen exchanger family ABIV_RS11760 PF00155 Aminotransferase class I and II ABIV_RS11770 PF00484 Carbonic anhydrase ABIV_RS11780 PF04055 Radical SAM superfamily ABIV_RS11785 PF09456 RcsC Alpha-Beta-Loop (ABL) ABIV_RS11785 PF00072 Response regulator receiver domain ABIV_RS11785 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11790 PF09308 LuxQ, periplasmic ABIV_RS11790 PF00072 Response regulator receiver domain ABIV_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11790 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS11795 PF08448 PAS fold ABIV_RS11795 PF08447 PAS fold ABIV_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11805 PF04028 Domain of unknown function (DUF374) ABIV_RS11810 PF04055 Radical SAM superfamily ABIV_RS11810 PF01938 TRAM domain ABIV_RS11810 PF00919 Uncharacterized protein family UPF0004 ABIV_RS11820 PF08529 NusA N-terminal domain ABIV_RS11820 PF13184 NusA-like KH domain ABIV_RS11825 PF09190 DALR domain ABIV_RS11825 PF01406 tRNA synthetases class I (C) catalytic domain ABIV_RS11830 PF02652 L-lactate permease ABIV_RS11835 PF00005 ABC transporter ABIV_RS11835 PF08402 TOBE domain ABIV_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS11845 PF13416 Bacterial extracellular solute-binding protein ABIV_RS11850 PF01084 Ribosomal protein S18 ABIV_RS11855 PF00436 Single-strand binding protein family ABIV_RS11860 PF01250 Ribosomal protein S6 ABIV_RS11865 PF06144 DNA polymerase III, delta subunit ABIV_RS11885 PF00575 S1 RNA binding domain ABIV_RS11885 PF17876 Cold shock domain ABIV_RS11885 PF08461 Ribonuclease R winged-helix domain ABIV_RS11885 PF00773 RNB domain ABIV_RS11885 PF08206 Ribonuclease B OB domain ABIV_RS11895 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS11895 PF00989 PAS fold ABIV_RS11900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABIV_RS11900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABIV_RS11925 PF02481 DNA recombination-mediator protein A ABIV_RS11925 PF17782 DprA winged helix domain ABIV_RS11930 PF06965 Na+/H+ antiporter 1 ABIV_RS11935 PF02875 Mur ligase family, glutamate ligase domain ABIV_RS11935 PF08245 Mur ligase middle domain ABIV_RS11935 PF01225 Mur ligase family, catalytic domain ABIV_RS11945 PF00155 Aminotransferase class I and II ABIV_RS11955 PF01702 Queuine tRNA-ribosyltransferase ABIV_RS11960 PF00263 Bacterial type II and III secretion system protein ABIV_RS11960 PF03958 Bacterial type II/III secretion system short domain ABIV_RS11985 PF00437 Type II/IV secretion system protein ABIV_RS12010 PF02686 Glu-tRNAGln amidotransferase C subunit ABIV_RS12015 PF03960 ArsC family ABIV_RS12025 PF01474 Class-II DAHP synthetase family ABIV_RS12030 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABIV_RS12040 PF03652 Holliday junction resolvase ABIV_RS12050 PF02743 Cache domain ABIV_RS12050 PF00672 HAMP domain ABIV_RS12050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS12055 PF11849 Domain of unknown function (DUF3369) ABIV_RS12060 PF01648 4'-phosphopantetheinyl transferase superfamily ABIV_RS12065 PF00528 Binding-protein-dependent transport system inner membrane component ABIV_RS12070 PF02569 Pantoate-beta-alanine ligase ABIV_RS12080 PF04055 Radical SAM superfamily ABIV_RS12080 PF18693 TRAM domain ABIV_RS12080 PF00919 Uncharacterized protein family UPF0004 ABIV_RS12085 PF01171 PP-loop family ABIV_RS12110 PF02107 Flagellar L-ring protein ABIV_RS12135 PF01313 Bacterial export proteins, family 3 ABIV_RS12145 PF02119 Flagellar P-ring protein ABIV_RS12150 PF02154 Flagellar motor switch protein FliM ABIV_RS12150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABIV_RS12160 PF00543 Nitrogen regulatory protein P-II ABIV_RS12165 PF00909 Ammonium Transporter Family ABIV_RS12170 PF00543 Nitrogen regulatory protein P-II ABIV_RS12175 PF00909 Ammonium Transporter Family ABIV_RS12190 PF01909 Nucleotidyltransferase domain ABIV_RS12190 PF01966 HD domain ABIV_RS12190 PF08335 GlnD PII-uridylyltransferase ABIV_RS12190 PF01842 ACT domain ABIV_RS12195 PF01553 Acyltransferase ABIV_RS12195 PF00501 AMP-binding enzyme ABIV_RS12200 PF00892 EamA-like transporter family ABIV_RS12215 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABIV_RS12220 PF02040 Arsenical pump membrane protein ABIV_RS12235 PF12833 Helix-turn-helix domain ABIV_RS12240 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS12245 PF00456 Transketolase, thiamine diphosphate binding domain ABIV_RS12245 PF02779 Transketolase, pyrimidine binding domain ABIV_RS12245 PF02780 Transketolase, C-terminal domain ABIV_RS12265 PF00005 ABC transporter ABIV_RS12265 PF03412 Peptidase C39 family ABIV_RS12265 PF00664 ABC transporter transmembrane region ABIV_RS12275 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS12275 PF00072 Response regulator receiver domain ABIV_RS12280 PF08447 PAS fold ABIV_RS12280 PF08448 PAS fold ABIV_RS12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS12300 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS12300 PF12804 MobA-like NTP transferase domain ABIV_RS12300 PF14602 Hexapeptide repeat of succinyl-transferase ABIV_RS12305 PF13419 Haloacid dehalogenase-like hydrolase ABIV_RS12305 PF00266 Aminotransferase class-V ABIV_RS12330 PF08245 Mur ligase middle domain ABIV_RS12330 PF02875 Mur ligase family, glutamate ligase domain ABIV_RS12330 PF01225 Mur ligase family, catalytic domain ABIV_RS12340 PF08245 Mur ligase middle domain ABIV_RS12355 PF00072 Response regulator receiver domain ABIV_RS12355 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS12360 PF08447 PAS fold ABIV_RS12360 PF08448 PAS fold ABIV_RS12360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS12365 PF17203 Single cache domain 3 ABIV_RS12365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABIV_RS12380 PF00072 Response regulator receiver domain ABIV_RS12405 PF00920 Dehydratase family ABIV_RS12410 PF13180 PDZ domain ABIV_RS12410 PF17820 PDZ domain ABIV_RS12415 PF00072 Response regulator receiver domain ABIV_RS12415 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS12435 PF02580 D-Tyr-tRNA(Tyr) deacylase ABIV_RS12440 PF07728 AAA domain (dynein-related subfamily) ABIV_RS12440 PF12102 Domain of unknown function (DUF3578) ABIV_RS12455 PF00155 Aminotransferase class I and II ABIV_RS12460 PF01914 MarC family integral membrane protein ABIV_RS12465 PF11412 Disulphide bond corrector protein DsbC ABIV_RS12465 PF02683 Cytochrome C biogenesis protein transmembrane region ABIV_RS12480 PF08495 FIST N domain ABIV_RS12480 PF10442 FIST C domain ABIV_RS12480 PF00563 EAL domain ABIV_RS12480 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS12485 PF02666 Phosphatidylserine decarboxylase ABIV_RS12495 PF03562 MltA specific insert domain ABIV_RS12495 PF06725 3D domain ABIV_RS12505 PF00012 Hsp70 protein ABIV_RS12510 PF01025 GrpE ABIV_RS12525 PF00072 Response regulator receiver domain ABIV_RS12525 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS12530 PF00072 Response regulator receiver domain ABIV_RS12530 PF13188 PAS domain ABIV_RS12530 PF08448 PAS fold ABIV_RS12530 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS12535 PF01416 tRNA pseudouridine synthase ABIV_RS12545 PF01478 Type IV leader peptidase family ABIV_RS12545 PF06750 Bacterial Peptidase A24 N-terminal domain ABIV_RS12550 PF01255 Putative undecaprenyl diphosphate synthase ABIV_RS12555 PF02441 Flavoprotein ABIV_RS12555 PF04127 DNA / pantothenate metabolism flavoprotein ABIV_RS12560 PF14602 Hexapeptide repeat of succinyl-transferase ABIV_RS12560 PF12804 MobA-like NTP transferase domain ABIV_RS12570 PF00270 DEAD/DEAH box helicase ABIV_RS12570 PF00271 Helicase conserved C-terminal domain ABIV_RS12570 PF17191 RecG wedge domain ABIV_RS12575 PF05958 tRNA (Uracil-5-)-methyltransferase ABIV_RS12580 PF00669 Bacterial flagellin N-terminal helical region ABIV_RS12580 PF07196 Flagellin hook IN motif ABIV_RS12580 PF00700 Bacterial flagellin C-terminal helical region ABIV_RS12585 PF00700 Bacterial flagellin C-terminal helical region ABIV_RS12585 PF07196 Flagellin hook IN motif ABIV_RS12585 PF00669 Bacterial flagellin N-terminal helical region ABIV_RS12600 PF01596 O-methyltransferase ABIV_RS12605 PF13537 Glutamine amidotransferase domain ABIV_RS12605 PF00733 Asparagine synthase ABIV_RS12610 PF16363 GDP-mannose 4,6 dehydratase ABIV_RS12665 PF13472 GDSL-like Lipase/Acylhydrolase family ABIV_RS12665 PF02348 Cytidylyltransferase ABIV_RS12670 PF00483 Nucleotidyl transferase ABIV_RS12675 PF02585 GlcNAc-PI de-N-acetylase ABIV_RS12680 PF00551 Formyl transferase ABIV_RS12680 PF02911 Formyl transferase, C-terminal domain ABIV_RS12680 PF01370 NAD dependent epimerase/dehydratase family ABIV_RS12685 PF02350 UDP-N-acetylglucosamine 2-epimerase ABIV_RS12690 PF08666 SAF domain ABIV_RS12690 PF03102 NeuB family ABIV_RS12700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABIV_RS12705 PF02719 Polysaccharide biosynthesis protein ABIV_RS12715 PF00154 recA bacterial DNA recombination protein ABIV_RS12720 PF03952 Enolase, N-terminal domain ABIV_RS12720 PF00113 Enolase, C-terminal TIM barrel domain ABIV_RS12735 PF02254 TrkA-N domain ABIV_RS12735 PF00999 Sodium/hydrogen exchanger family ABIV_RS12735 PF02080 TrkA-C domain ABIV_RS12740 PF06968 Biotin and Thiamin Synthesis associated domain ABIV_RS12740 PF04055 Radical SAM superfamily ABIV_RS12750 PF01751 Toprim domain ABIV_RS12750 PF01131 DNA topoisomerase ABIV_RS12750 PF13368 Topoisomerase C-terminal repeat ABIV_RS12755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABIV_RS12760 PF02621 Menaquinone biosynthesis ABIV_RS12765 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS12770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABIV_RS12775 PF00072 Response regulator receiver domain ABIV_RS12775 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS12785 PF00384 Molybdopterin oxidoreductase ABIV_RS12785 PF18364 Molybdopterin oxidoreductase N-terminal domain ABIV_RS12785 PF01568 Molydopterin dinucleotide binding domain ABIV_RS12790 PF00465 Iron-containing alcohol dehydrogenase ABIV_RS12800 PF00361 Proton-conducting membrane transporter ABIV_RS12805 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABIV_RS12805 PF00361 Proton-conducting membrane transporter ABIV_RS12810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABIV_RS12810 PF00361 Proton-conducting membrane transporter ABIV_RS12815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABIV_RS12820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABIV_RS12825 PF12838 4Fe-4S dicluster domain ABIV_RS12830 PF00146 NADH dehydrogenase ABIV_RS12835 PF12838 4Fe-4S dicluster domain ABIV_RS12835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABIV_RS12835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABIV_RS12835 PF00384 Molybdopterin oxidoreductase ABIV_RS12835 PF01568 Molydopterin dinucleotide binding domain ABIV_RS12850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABIV_RS12855 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABIV_RS12860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABIV_RS12865 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABIV_RS12870 PF00004 ATPase family associated with various cellular activities (AAA) ABIV_RS12870 PF16450 Proteasomal ATPase OB C-terminal domain ABIV_RS12870 PF17758 Proteasomal ATPase OB N-terminal domain ABIV_RS12905 PF01261 Xylose isomerase-like TIM barrel ABIV_RS12915 PF02677 Epoxyqueuosine reductase QueH ABIV_RS12920 PF02684 Lipid-A-disaccharide synthetase ABIV_RS12925 PF07977 FabA-like domain ABIV_RS12930 PF00132 Bacterial transferase hexapeptide (six repeats) ABIV_RS12930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABIV_RS12935 PF06689 ClpX C4-type zinc finger ABIV_RS12935 PF10431 C-terminal, D2-small domain, of ClpB protein ABIV_RS12935 PF07724 AAA domain (Cdc48 subfamily) ABIV_RS12950 PF00677 Lumazine binding domain ABIV_RS12955 PF13932 GidA associated domain ABIV_RS12955 PF01134 Glucose inhibited division protein A ABIV_RS12960 PF12801 4Fe-4S binding domain ABIV_RS12960 PF13746 4Fe-4S dicluster domain ABIV_RS12960 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABIV_RS12965 PF06418 CTP synthase N-terminus ABIV_RS12965 PF00117 Glutamine amidotransferase class-I ABIV_RS12970 PF17768 RecJ OB domain ABIV_RS12970 PF02272 DHHA1 domain ABIV_RS12970 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABIV_RS12970 PF01368 DHH family ABIV_RS12985 PF00117 Glutamine amidotransferase class-I ABIV_RS13005 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABIV_RS13005 PF14579 Helix-hairpin-helix motif ABIV_RS13005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABIV_RS13005 PF02811 PHP domain ABIV_RS13010 PF01975 Survival protein SurE ABIV_RS13035 PF01967 MoaC family ABIV_RS13040 PF01165 Ribosomal protein S21 ABIV_RS13075 PF01027 Inhibitor of apoptosis-promoting Bax1 ABIV_RS13080 PF02581 Thiamine monophosphate synthase ABIV_RS13080 PF17792 ThiD2 family ABIV_RS13085 PF13649 Methyltransferase domain ABIV_RS13090 PF03840 Preprotein translocase SecG subunit ABIV_RS13095 PF01765 Ribosome recycling factor ABIV_RS13100 PF00156 Phosphoribosyl transferase domain ABIV_RS13110 PF12832 MFS_1 like family ABIV_RS13120 PF00696 Amino acid kinase family ABIV_RS13120 PF13840 ACT domain ABIV_RS13125 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS13125 PF00072 Response regulator receiver domain ABIV_RS13135 PF06339 Ectoine synthase ABIV_RS13140 PF00202 Aminotransferase class-III ABIV_RS13145 PF00583 Acetyltransferase (GNAT) family ABIV_RS13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABIV_RS13155 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABIV_RS13155 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ABIV_RS13160 PF03883 Peroxide stress protein YaaA ABIV_RS13165 PF02810 SEC-C motif ABIV_RS13185 PF03167 Uracil DNA glycosylase superfamily ABIV_RS13195 PF13419 Haloacid dehalogenase-like hydrolase ABIV_RS13215 PF00571 CBS domain ABIV_RS13215 PF01595 Cyclin M transmembrane N-terminal domain ABIV_RS13220 PF01814 Hemerythrin HHE cation binding domain ABIV_RS13235 PF01047 MarR family ABIV_RS13245 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS13265 PF01053 Cys/Met metabolism PLP-dependent enzyme ABIV_RS13270 PF02082 Transcriptional regulator ABIV_RS13275 PF00291 Pyridoxal-phosphate dependent enzyme ABIV_RS13285 PF01507 Phosphoadenosine phosphosulfate reductase family ABIV_RS13290 PF01507 Phosphoadenosine phosphosulfate reductase family ABIV_RS13295 PF00009 Elongation factor Tu GTP binding domain ABIV_RS13300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABIV_RS13300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABIV_RS13305 PF00266 Aminotransferase class-V ABIV_RS13315 PF00593 TonB dependent receptor ABIV_RS13315 PF07715 TonB-dependent Receptor Plug Domain ABIV_RS13320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS13320 PF08447 PAS fold ABIV_RS13345 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ABIV_RS13350 PF12801 4Fe-4S binding domain ABIV_RS13350 PF13237 4Fe-4S dicluster domain ABIV_RS13355 PF12800 4Fe-4S binding domain ABIV_RS13355 PF12838 4Fe-4S dicluster domain ABIV_RS13360 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABIV_RS13360 PF01568 Molydopterin dinucleotide binding domain ABIV_RS13360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABIV_RS13360 PF00384 Molybdopterin oxidoreductase ABIV_RS13375 PF08447 PAS fold ABIV_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS13375 PF08448 PAS fold ABIV_RS13380 PF00149 Calcineurin-like phosphoesterase ABIV_RS13400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABIV_RS13400 PF17200 Single Cache domain 2 ABIV_RS13400 PF00672 HAMP domain ABIV_RS13405 PF00072 Response regulator receiver domain ABIV_RS13405 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS13410 PF00011 Hsp20/alpha crystallin family ABIV_RS13415 PF00009 Elongation factor Tu GTP binding domain ABIV_RS13415 PF00679 Elongation factor G C-terminus ABIV_RS13415 PF03144 Elongation factor Tu domain 2 ABIV_RS13425 PF00005 ABC transporter ABIV_RS13425 PF02687 FtsX-like permease family ABIV_RS13425 PF12704 MacB-like periplasmic core domain ABIV_RS13450 PF00149 Calcineurin-like phosphoesterase ABIV_RS13455 PF00072 Response regulator receiver domain ABIV_RS13455 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABIV_RS13460 PF00672 HAMP domain ABIV_RS13460 PF00512 His Kinase A (phospho-acceptor) domain ABIV_RS13465 PF11849 Domain of unknown function (DUF3369) ABIV_RS13470 PF08019 Phosphoethanolamine transferase EptA/EptB ABIV_RS13470 PF00884 Sulfatase ABIV_RS13475 PF04143 Sulphur transport ABIV_RS13480 PF01206 Sulfurtransferase TusA ABIV_RS13485 PF04960 Glutaminase ABIV_RS13515 PF00486 Transcriptional regulatory protein, C terminal ABIV_RS13515 PF00072 Response regulator receiver domain ABIV_RS13525 PF03458 UPF0126 domain ABIV_RS13530 PF00990 Diguanylate cyclase, GGDEF domain ABIV_RS13540 PF01339 CheB methylesterase ABIV_RS13540 PF00072 Response regulator receiver domain ABIV_RS13545 PF00551 Formyl transferase ABIV_RS13550 PF00892 EamA-like transporter family ABIV_RS13555 PF02075 Crossover junction endodeoxyribonuclease RuvC