ABED_RS00005 SM00382 ATPases associated with a variety of cellular activities ABED_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ABED_RS00010 SM00480 DNA polymerase III beta subunit ABED_RS00015 SM00387 Histidine kinase-like ATPases ABED_RS00015 SM00433 TopoisomeraseII ABED_RS00045 SM00382 ATPases associated with a variety of cellular activities ABED_RS00095 SM00998 Adenylosuccinate lyase C-terminus ABED_RS00135 SM00829 Enoylreductase ABED_RS00150 SM00845 GatB domain ABED_RS00170 SM00448 cheY-homologous receiver domain ABED_RS00170 SM00862 Transcriptional regulatory protein, C terminal ABED_RS00175 SM00091 PAS domain ABED_RS00175 SM00387 Histidine kinase-like ATPases ABED_RS00205 SM00878 Biotin carboxylase C-terminal domain ABED_RS00210 SM00487 DEAD-like helicases superfamily ABED_RS00210 SM00490 helicase superfamily c-terminal domain ABED_RS00245 SM00382 ATPases associated with a variety of cellular activities ABED_RS00250 SM00363 S4 RNA-binding domain ABED_RS00255 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS00260 SM00849 Metallo-beta-lactamase superfamily ABED_RS00265 SM00650 Ribosomal RNA adenine dimethylases ABED_RS00295 SM00360 RNA recognition motif ABED_RS00300 SM00448 cheY-homologous receiver domain ABED_RS00300 SM00862 Transcriptional regulatory protein, C terminal ABED_RS00305 SM00387 Histidine kinase-like ATPases ABED_RS00305 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS00330 SM00867 YceI-like domain ABED_RS00355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABED_RS00375 SM00450 Rhodanese Homology Domain ABED_RS00415 SM00937 ABED_RS00415 ABED_RS00430 SM00052 Putative diguanylate phosphodiesterase ABED_RS00430 SM00267 diguanylate cyclase ABED_RS00445 SM00382 ATPases associated with a variety of cellular activities ABED_RS00460 SM00448 cheY-homologous receiver domain ABED_RS00460 SM00862 Transcriptional regulatory protein, C terminal ABED_RS00465 SM00387 Histidine kinase-like ATPases ABED_RS00465 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS00505 SM00382 ATPases associated with a variety of cellular activities ABED_RS00545 SM01018 B12 binding domain ABED_RS00555 SM00244 prohibitin homologues ABED_RS00595 SM00448 cheY-homologous receiver domain ABED_RS00610 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABED_RS00620 SM00788 Adenylosuccinate synthetase ABED_RS00635 SM00867 YceI-like domain ABED_RS00640 SM00347 helix_turn_helix multiple antibiotic resistance protein ABED_RS00645 SM00867 YceI-like domain ABED_RS00665 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABED_RS00700 SM00671 Sel1-like repeats. ABED_RS00740 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABED_RS00855 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS00855 SM00871 Bacterial transcription activator, effector binding domain ABED_RS00860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS00865 SM00487 DEAD-like helicases superfamily ABED_RS00865 SM00490 helicase superfamily c-terminal domain ABED_RS00875 SM00347 helix_turn_helix multiple antibiotic resistance protein ABED_RS00880 SM00861 Transketolase, pyrimidine binding domain ABED_RS00910 SM00422 helix_turn_helix, mercury resistance ABED_RS00930 SM00563 Phosphate acyltransferases ABED_RS00935 SM00563 Phosphate acyltransferases ABED_RS00955 SM00248 ankyrin repeats ABED_RS00960 SM00938 Nitrogen regulatory protein P-II ABED_RS01040 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS01065 SM00732 Likely ribonuclease with RNase H fold. ABED_RS01145 SM00955 ABED_RS01145 ABED_RS01180 SM00840 ABED_RS01180 ABED_RS01185 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS01195 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS01225 SM00947 Carbonic anhydrase ABED_RS01280 SM00862 Transcriptional regulatory protein, C terminal ABED_RS01290 SM00782 PhnA Zinc-Ribbon ABED_RS01380 SM00382 ATPases associated with a variety of cellular activities ABED_RS01390 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABED_RS01395 SM00357 Cold shock protein domain ABED_RS01395 SM00382 ATPases associated with a variety of cellular activities ABED_RS01395 SM00959 Rho termination factor, N-terminal domain ABED_RS01410 SM00562 ABED_RS01410 ABED_RS01500 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABED_RS01510 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABED_RS01575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS01575 SM01049 ABED_RS01575 ABED_RS01615 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS01665 SM00052 Putative diguanylate phosphodiesterase ABED_RS01665 SM00267 diguanylate cyclase ABED_RS01680 SM00320 WD40 repeats ABED_RS01705 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABED_RS01725 SM00387 Histidine kinase-like ATPases ABED_RS01725 SM01049 ABED_RS01725 ABED_RS01730 SM00448 cheY-homologous receiver domain ABED_RS01730 SM00862 Transcriptional regulatory protein, C terminal ABED_RS01750 SM00100 Cyclic nucleotide-monophosphate binding domain ABED_RS01750 SM00419 helix_turn_helix, cAMP Regulatory protein ABED_RS01760 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS01765 SM01387 ABED_RS01765 ABED_RS01780 SM00881 CoA binding domain ABED_RS01785 SM00387 Histidine kinase-like ATPases ABED_RS01785 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS01790 SM00448 cheY-homologous receiver domain ABED_RS01790 SM00862 Transcriptional regulatory protein, C terminal ABED_RS01885 SM01323 ABED_RS01885 ABED_RS01940 SM00487 DEAD-like helicases superfamily ABED_RS01940 SM00490 helicase superfamily c-terminal domain ABED_RS01945 SM00563 Phosphate acyltransferases ABED_RS01965 SM00487 DEAD-like helicases superfamily ABED_RS01965 SM00490 helicase superfamily c-terminal domain ABED_RS01965 SM00982 ABED_RS01965 ABED_RS01965 SM01058 CarD-like/TRCF domain ABED_RS01985 SM00448 cheY-homologous receiver domain ABED_RS01985 SM00862 Transcriptional regulatory protein, C terminal ABED_RS02000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02005 SM00448 cheY-homologous receiver domain ABED_RS02010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS02010 SM00091 PAS domain ABED_RS02015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS02015 SM00091 PAS domain ABED_RS02015 SM00387 Histidine kinase-like ATPases ABED_RS02015 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS02045 SM00260 Two component signalling adaptor domain ABED_RS02070 SM00883 Chaperonin 10 Kd subunit ABED_RS02080 SM00387 Histidine kinase-like ATPases ABED_RS02080 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS02085 SM00448 cheY-homologous receiver domain ABED_RS02085 SM00862 Transcriptional regulatory protein, C terminal ABED_RS02100 SM00867 YceI-like domain ABED_RS02115 SM00382 ATPases associated with a variety of cellular activities ABED_RS02175 SM00382 ATPases associated with a variety of cellular activities ABED_RS02180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS02180 SM00091 PAS domain ABED_RS02180 SM00448 cheY-homologous receiver domain ABED_RS02180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS02185 SM00448 cheY-homologous receiver domain ABED_RS02190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABED_RS02190 SM00387 Histidine kinase-like ATPases ABED_RS02195 SM00917 LeuA allosteric (dimerisation) domain ABED_RS02205 SM01235 ABED_RS02205 ABED_RS02210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABED_RS02210 SM00534 ATPase domain of DNA mismatch repair MUTS family ABED_RS02235 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS02260 SM00382 ATPases associated with a variety of cellular activities ABED_RS02275 SM00267 diguanylate cyclase ABED_RS02310 SM00838 Elongation factor G C-terminus ABED_RS02330 SM01400 ABED_RS02330 ABED_RS02400 SM00479 ABED_RS02400 ABED_RS02405 SM00100 Cyclic nucleotide-monophosphate binding domain ABED_RS02405 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS02430 SM00479 ABED_RS02430 ABED_RS02435 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS02450 SM00448 cheY-homologous receiver domain ABED_RS02450 SM00862 Transcriptional regulatory protein, C terminal ABED_RS02455 SM00387 Histidine kinase-like ATPases ABED_RS02455 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS02455 SM01049 ABED_RS02455 ABED_RS02530 SM00912 haemagglutination activity domain ABED_RS02540 SM00912 haemagglutination activity domain ABED_RS02545 SM00448 cheY-homologous receiver domain ABED_RS02545 SM00862 Transcriptional regulatory protein, C terminal ABED_RS02575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABED_RS02585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02595 SM00155 Phospholipase D. Active site motifs. ABED_RS02615 SM00852 Probable molybdopterin binding domain ABED_RS02655 SM00382 ATPases associated with a variety of cellular activities ABED_RS02665 SM00072 Guanylate kinase homologues. ABED_RS02670 SM00052 Putative diguanylate phosphodiesterase ABED_RS02670 SM00267 diguanylate cyclase ABED_RS02670 SM00448 cheY-homologous receiver domain ABED_RS02690 SM00382 ATPases associated with a variety of cellular activities ABED_RS02705 SM00899 ABED_RS02705 ABED_RS02715 SM00382 ATPases associated with a variety of cellular activities ABED_RS02725 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS02735 SM00671 Sel1-like repeats. ABED_RS02810 SM00382 ATPases associated with a variety of cellular activities ABED_RS02810 SM00464 Found in ATP-dependent protease La (LON) ABED_RS02820 SM00226 Low molecular weight phosphatase family ABED_RS02830 SM00028 Tetratricopeptide repeats ABED_RS02835 SM00347 helix_turn_helix multiple antibiotic resistance protein ABED_RS02845 SM00530 Helix-turn-helix XRE-family like proteins ABED_RS02855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS02860 SM00091 PAS domain ABED_RS02860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02880 SM00878 Biotin carboxylase C-terminal domain ABED_RS02905 SM00382 ATPases associated with a variety of cellular activities ABED_RS02925 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS02930 SM00267 diguanylate cyclase ABED_RS02940 SM00260 Two component signalling adaptor domain ABED_RS02940 SM00448 cheY-homologous receiver domain ABED_RS02960 SM00487 DEAD-like helicases superfamily ABED_RS02960 SM00490 helicase superfamily c-terminal domain ABED_RS02965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS02970 SM00478 endonuclease III ABED_RS02990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03005 SM00448 cheY-homologous receiver domain ABED_RS03005 SM00862 Transcriptional regulatory protein, C terminal ABED_RS03010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS03010 SM00091 PAS domain ABED_RS03010 SM00387 Histidine kinase-like ATPases ABED_RS03015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03015 SM01358 ABED_RS03015 ABED_RS03070 SM00646 ABED_RS03070 ABED_RS03080 SM00363 S4 RNA-binding domain ABED_RS03085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS03085 SM00954 Region found in RelA / SpoT proteins ABED_RS03090 SM01409 ABED_RS03090 ABED_RS03145 SM00267 diguanylate cyclase ABED_RS03150 SM00382 ATPases associated with a variety of cellular activities ABED_RS03365 SM00382 ATPases associated with a variety of cellular activities ABED_RS03375 SM00248 ankyrin repeats ABED_RS03440 SM00448 cheY-homologous receiver domain ABED_RS03440 SM00862 Transcriptional regulatory protein, C terminal ABED_RS03450 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABED_RS03530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABED_RS03565 SM01403 ABED_RS03565 ABED_RS03585 SM01382 ABED_RS03585 ABED_RS03585 SM01383 ABED_RS03585 ABED_RS03600 SM00322 K homology RNA-binding domain ABED_RS03620 SM01374 ABED_RS03620 ABED_RS03625 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABED_RS03675 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS03680 SM00986 Uracil DNA glycosylase superfamily ABED_RS03680 SM00987 UreE urease accessory protein, C-terminal domain ABED_RS03695 SM00260 Two component signalling adaptor domain ABED_RS03700 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS03715 SM00852 Probable molybdopterin binding domain ABED_RS03720 SM01059 Chloramphenicol acetyltransferase ABED_RS03730 SM00829 Enoylreductase ABED_RS03740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03745 SM01005 Alanine racemase, C-terminal domain ABED_RS03750 SM00465 GIY-YIG type nucleases (URI domain) ABED_RS03755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS03805 SM00347 helix_turn_helix multiple antibiotic resistance protein ABED_RS03820 SM00267 diguanylate cyclase ABED_RS03860 SM00220 Serine/Threonine protein kinases, catalytic domain ABED_RS03870 SM00052 Putative diguanylate phosphodiesterase ABED_RS03875 SM00448 cheY-homologous receiver domain ABED_RS03875 SM00850 LytTr DNA-binding domain ABED_RS03950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS04010 SM00479 ABED_RS04010 ABED_RS04115 SM00530 Helix-turn-helix XRE-family like proteins ABED_RS04160 SM00487 DEAD-like helicases superfamily ABED_RS04190 SM00530 Helix-turn-helix XRE-family like proteins ABED_RS04210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS04215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS04225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABED_RS04240 SM01130 ABED_RS04240 ABED_RS04255 SM00382 ATPases associated with a variety of cellular activities ABED_RS04290 SM00382 ATPases associated with a variety of cellular activities ABED_RS04305 SM00052 Putative diguanylate phosphodiesterase ABED_RS04305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS04305 SM00091 PAS domain ABED_RS04305 SM00267 diguanylate cyclase ABED_RS04315 SM00382 ATPases associated with a variety of cellular activities ABED_RS04315 SM00962 SRP54-type protein, GTPase domain ABED_RS04330 SM00322 K homology RNA-binding domain ABED_RS04330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS04370 SM00448 cheY-homologous receiver domain ABED_RS04370 SM00862 Transcriptional regulatory protein, C terminal ABED_RS04375 SM00387 Histidine kinase-like ATPases ABED_RS04375 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS04385 SM00267 diguanylate cyclase ABED_RS04395 SM00382 ATPases associated with a variety of cellular activities ABED_RS04480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABED_RS04480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS04480 SM00849 Metallo-beta-lactamase superfamily ABED_RS04485 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ABED_RS04485 SM01080 ABED_RS04485 ABED_RS04490 SM00028 Tetratricopeptide repeats ABED_RS04545 SM00382 ATPases associated with a variety of cellular activities ABED_RS04555 SM00912 haemagglutination activity domain ABED_RS04590 SM00219 Tyrosine kinase, catalytic domain ABED_RS04590 SM00220 Serine/Threonine protein kinases, catalytic domain ABED_RS04675 SM00857 Resolvase, N terminal domain ABED_RS04690 SM00382 ATPases associated with a variety of cellular activities ABED_RS04690 SM01086 C-terminal, D2-small domain, of ClpB protein ABED_RS04705 SM00257 Lysin motif ABED_RS04755 SM00965 Secretin and TonB N terminus short domain ABED_RS04760 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABED_RS04765 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABED_RS04800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS04800 SM00091 PAS domain ABED_RS04800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS04830 SM00382 ATPases associated with a variety of cellular activities ABED_RS04840 SM00060 Fibronectin type 3 domain ABED_RS04845 SM00363 S4 RNA-binding domain ABED_RS04895 SM01329 ABED_RS04895 ABED_RS04925 SM00363 S4 RNA-binding domain ABED_RS04925 SM01390 ABED_RS04925 ABED_RS04930 SM00662 RNA polymerases D ABED_RS04945 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS04945 SM01240 ABED_RS04945 ABED_RS04960 SM00062 Bacterial periplasmic substrate-binding proteins ABED_RS04965 SM00448 cheY-homologous receiver domain ABED_RS04965 SM00862 Transcriptional regulatory protein, C terminal ABED_RS04980 SM00112 Cadherin repeats. ABED_RS04980 SM00736 Dystroglycan-type cadherin-like domains. ABED_RS04995 SM00271 DnaJ molecular chaperone homology domain ABED_RS05000 SM00271 DnaJ molecular chaperone homology domain ABED_RS05010 SM00387 Histidine kinase-like ATPases ABED_RS05015 SM00448 cheY-homologous receiver domain ABED_RS05015 SM00862 Transcriptional regulatory protein, C terminal ABED_RS05020 SM00912 haemagglutination activity domain ABED_RS05035 SM00382 ATPases associated with a variety of cellular activities ABED_RS05095 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS05175 SM00382 ATPases associated with a variety of cellular activities ABED_RS05185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS05190 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABED_RS05190 SM00292 breast cancer carboxy-terminal domain ABED_RS05190 SM00532 Ligase N family ABED_RS05205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS05225 SM00919 Malic enzyme, NAD binding domain ABED_RS05225 SM01274 ABED_RS05225 ABED_RS05260 SM00448 cheY-homologous receiver domain ABED_RS05260 SM00862 Transcriptional regulatory protein, C terminal ABED_RS05265 SM00387 Histidine kinase-like ATPases ABED_RS05270 SM00244 prohibitin homologues ABED_RS05285 SM00671 Sel1-like repeats. ABED_RS05335 SM00382 ATPases associated with a variety of cellular activities ABED_RS05355 SM00382 ATPases associated with a variety of cellular activities ABED_RS05365 SM00448 cheY-homologous receiver domain ABED_RS05365 SM00862 Transcriptional regulatory protein, C terminal ABED_RS05370 SM00387 Histidine kinase-like ATPases ABED_RS05370 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS05390 SM00479 ABED_RS05390 ABED_RS05395 SM00267 diguanylate cyclase ABED_RS05400 SM00530 Helix-turn-helix XRE-family like proteins ABED_RS05405 SM00490 helicase superfamily c-terminal domain ABED_RS05410 SM00091 PAS domain ABED_RS05410 SM00387 Histidine kinase-like ATPases ABED_RS05415 SM00448 cheY-homologous receiver domain ABED_RS05415 SM00862 Transcriptional regulatory protein, C terminal ABED_RS05425 SM00382 ATPases associated with a variety of cellular activities ABED_RS05435 SM00421 helix_turn_helix, Lux Regulon ABED_RS05445 SM00052 Putative diguanylate phosphodiesterase ABED_RS05445 SM00267 diguanylate cyclase ABED_RS05460 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS05465 SM00382 ATPases associated with a variety of cellular activities ABED_RS05475 SM00852 Probable molybdopterin binding domain ABED_RS05505 SM00530 Helix-turn-helix XRE-family like proteins ABED_RS05515 SM00871 Bacterial transcription activator, effector binding domain ABED_RS05540 SM00463 Small MutS-related domain ABED_RS05540 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABED_RS05540 SM00534 ATPase domain of DNA mismatch repair MUTS family ABED_RS05545 SM00116 Domain in cystathionine beta-synthase and other proteins. ABED_RS05545 SM01091 Transporter associated domain ABED_RS05565 SM00938 Nitrogen regulatory protein P-II ABED_RS05600 SM00843 ABED_RS05600 ABED_RS05640 SM01209 ABED_RS05640 ABED_RS05640 SM01210 ABED_RS05640 ABED_RS05660 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS05660 SM00322 K homology RNA-binding domain ABED_RS05665 SM00448 cheY-homologous receiver domain ABED_RS05670 SM00073 Histidine Phosphotransfer domain ABED_RS05670 SM00260 Two component signalling adaptor domain ABED_RS05670 SM00387 Histidine kinase-like ATPases ABED_RS05670 SM01231 ABED_RS05670 ABED_RS05675 SM00138 Methyltransferase, chemotaxis proteins ABED_RS05685 SM00448 cheY-homologous receiver domain ABED_RS05730 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS05890 SM01004 Delta-aminolevulinic acid dehydratase ABED_RS05895 SM00091 PAS domain ABED_RS05895 SM00387 Histidine kinase-like ATPases ABED_RS05900 SM00448 cheY-homologous receiver domain ABED_RS05900 SM00862 Transcriptional regulatory protein, C terminal ABED_RS05920 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS05960 SM00271 DnaJ molecular chaperone homology domain ABED_RS05985 SM00479 ABED_RS05985 ABED_RS06035 SM00448 cheY-homologous receiver domain ABED_RS06035 SM00862 Transcriptional regulatory protein, C terminal ABED_RS06040 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABED_RS06040 SM00474 3'-5' exonuclease ABED_RS06040 SM00475 5'-3' exonuclease ABED_RS06040 SM00482 DNA polymerase A domain ABED_RS06055 SM00052 Putative diguanylate phosphodiesterase ABED_RS06055 SM00267 diguanylate cyclase ABED_RS06060 SM00382 ATPases associated with a variety of cellular activities ABED_RS06080 SM00363 S4 RNA-binding domain ABED_RS06125 SM00448 cheY-homologous receiver domain ABED_RS06125 SM00862 Transcriptional regulatory protein, C terminal ABED_RS06130 SM00387 Histidine kinase-like ATPases ABED_RS06130 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS06150 SM00271 DnaJ molecular chaperone homology domain ABED_RS06175 SM00849 Metallo-beta-lactamase superfamily ABED_RS06180 SM00267 diguanylate cyclase ABED_RS06185 SM00267 diguanylate cyclase ABED_RS06215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS06215 SM01049 ABED_RS06215 ABED_RS06225 SM00957 SecA DEAD-like domain ABED_RS06225 SM00958 SecA preprotein cross-linking domain ABED_RS06280 SM01007 Class II Aldolase and Adducin N-terminal domain ABED_RS06285 SM00411 bacterial (prokaryotic) histone like domain ABED_RS06445 SM00448 cheY-homologous receiver domain ABED_RS06455 SM00091 PAS domain ABED_RS06455 SM00387 Histidine kinase-like ATPases ABED_RS06460 SM00271 DnaJ molecular chaperone homology domain ABED_RS06465 SM00422 helix_turn_helix, mercury resistance ABED_RS06475 SM00382 ATPases associated with a variety of cellular activities ABED_RS06515 SM00851 MGS-like domain ABED_RS06515 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABED_RS06550 SM00864 Tubulin/FtsZ family, GTPase domain ABED_RS06550 SM00865 Tubulin/FtsZ family, C-terminal domain ABED_RS06555 SM00842 Cell division protein FtsA ABED_RS06595 SM00382 ATPases associated with a variety of cellular activities ABED_RS06620 SM00487 DEAD-like helicases superfamily ABED_RS06620 SM00490 helicase superfamily c-terminal domain ABED_RS06690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS06730 SM00981 ABED_RS06730 ABED_RS06840 SM00267 diguanylate cyclase ABED_RS06905 SM00965 Secretin and TonB N terminus short domain ABED_RS06910 SM00267 diguanylate cyclase ABED_RS06940 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS06945 SM00478 endonuclease III ABED_RS06970 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS07000 SM00965 Secretin and TonB N terminus short domain ABED_RS07015 SM00487 DEAD-like helicases superfamily ABED_RS07015 SM00490 helicase superfamily c-terminal domain ABED_RS07035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS07065 SM00852 Probable molybdopterin binding domain ABED_RS07095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABED_RS07120 SM00387 Histidine kinase-like ATPases ABED_RS07125 SM00448 cheY-homologous receiver domain ABED_RS07145 SM00460 Transglutaminase/protease-like homologues ABED_RS07160 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABED_RS07215 SM00671 Sel1-like repeats. ABED_RS07275 SM00387 Histidine kinase-like ATPases ABED_RS07275 SM01049 ABED_RS07275 ABED_RS07285 SM00670 Large family of predicted nucleotide-binding domains ABED_RS07295 SM00052 Putative diguanylate phosphodiesterase ABED_RS07295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS07295 SM00267 diguanylate cyclase ABED_RS07305 SM00091 PAS domain ABED_RS07305 SM00267 diguanylate cyclase ABED_RS07310 SM00487 DEAD-like helicases superfamily ABED_RS07310 SM00490 helicase superfamily c-terminal domain ABED_RS07330 SM00387 Histidine kinase-like ATPases ABED_RS07345 SM00248 ankyrin repeats ABED_RS07370 SM00052 Putative diguanylate phosphodiesterase ABED_RS07370 SM00267 diguanylate cyclase ABED_RS07425 SM00965 Secretin and TonB N terminus short domain ABED_RS07450 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS07470 SM01131 ABED_RS07470 ABED_RS07495 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABED_RS07540 SM00382 ATPases associated with a variety of cellular activities ABED_RS07570 SM00470 ParB-like nuclease domain ABED_RS07615 SM00400 zinc finger ABED_RS07615 SM00493 ABED_RS07615 ABED_RS07625 SM00358 Double-stranded RNA binding motif ABED_RS07625 SM00535 Ribonuclease III family ABED_RS07650 SM00855 Phosphoglycerate mutase family ABED_RS07665 SM01245 ABED_RS07665 ABED_RS07675 SM01234 ABED_RS07675 ABED_RS07690 SM00382 ATPases associated with a variety of cellular activities ABED_RS07690 SM01086 C-terminal, D2-small domain, of ClpB protein ABED_RS07745 SM00062 Bacterial periplasmic substrate-binding proteins ABED_RS07745 SM00387 Histidine kinase-like ATPases ABED_RS07750 SM00798 AICARFT/IMPCHase bienzyme ABED_RS07750 SM00851 MGS-like domain ABED_RS07785 SM00382 ATPases associated with a variety of cellular activities ABED_RS07860 SM00487 DEAD-like helicases superfamily ABED_RS07890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS07895 SM00091 PAS domain ABED_RS07960 SM00448 cheY-homologous receiver domain ABED_RS07960 SM00862 Transcriptional regulatory protein, C terminal ABED_RS07965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS07975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS07975 SM00091 PAS domain ABED_RS07975 SM00448 cheY-homologous receiver domain ABED_RS07975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABED_RS07980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS07980 SM01358 ABED_RS07980 ABED_RS07985 SM00062 Bacterial periplasmic substrate-binding proteins ABED_RS07985 SM00091 PAS domain ABED_RS07985 SM00387 Histidine kinase-like ATPases ABED_RS08015 SM00862 Transcriptional regulatory protein, C terminal ABED_RS08125 SM00387 Histidine kinase-like ATPases ABED_RS08130 SM00448 cheY-homologous receiver domain ABED_RS08130 SM00862 Transcriptional regulatory protein, C terminal ABED_RS08195 SM00382 ATPases associated with a variety of cellular activities ABED_RS08205 SM00450 Rhodanese Homology Domain ABED_RS08255 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABED_RS08260 SM00434 DNA Topoisomerase IV ABED_RS08480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS08485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS08505 SM00904 Riboflavin kinase ABED_RS08565 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABED_RS08580 SM00382 ATPases associated with a variety of cellular activities ABED_RS08590 SM00899 ABED_RS08590 ABED_RS08625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABED_RS08655 SM00357 Cold shock protein domain ABED_RS08660 SM00448 cheY-homologous receiver domain ABED_RS08660 SM00862 Transcriptional regulatory protein, C terminal ABED_RS08665 SM00387 Histidine kinase-like ATPases ABED_RS08710 SM00663 RNA polymerase I subunit A N-terminus ABED_RS08735 SM00649 Ribosomal protein L11/L12 ABED_RS08740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABED_RS08800 SM00382 ATPases associated with a variety of cellular activities ABED_RS08810 SM01230 ABED_RS08810 ABED_RS08895 SM00382 ATPases associated with a variety of cellular activities ABED_RS08895 SM01086 C-terminal, D2-small domain, of ClpB protein ABED_RS08940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS08950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABED_RS08965 SM00226 Low molecular weight phosphatase family ABED_RS08990 SM00382 ATPases associated with a variety of cellular activities ABED_RS09035 SM00382 ATPases associated with a variety of cellular activities ABED_RS09035 SM00962 SRP54-type protein, GTPase domain ABED_RS09065 SM00028 Tetratricopeptide repeats ABED_RS09125 SM00448 cheY-homologous receiver domain ABED_RS09160 SM00382 ATPases associated with a variety of cellular activities ABED_RS09160 SM00962 SRP54-type protein, GTPase domain ABED_RS09160 SM00963 SRP54-type protein, helical bundle domain ABED_RS09195 SM01001 AIR carboxylase ABED_RS09210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS09210 SM01049 ABED_RS09210 ABED_RS09225 SM00838 Elongation factor G C-terminus ABED_RS09225 SM00889 Elongation factor G, domain IV ABED_RS09265 SM00382 ATPases associated with a variety of cellular activities ABED_RS09340 SM00382 ATPases associated with a variety of cellular activities ABED_RS09345 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS09390 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS09390 SM00732 Likely ribonuclease with RNase H fold. ABED_RS09410 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS09410 SM00871 Bacterial transcription activator, effector binding domain ABED_RS09470 SM00905 Dihydroneopterin aldolase ABED_RS09475 SM01207 ABED_RS09475 ABED_RS09540 SM00841 Elongation factor P, C-terminal ABED_RS09540 SM01185 ABED_RS09540 ABED_RS09550 SM00316 Ribosomal protein S1-like RNA-binding domain ABED_RS09565 SM00874 tRNA synthetase B5 domain ABED_RS09565 SM00896 Ferredoxin-fold anticodon binding domain ABED_RS09585 SM00825 Beta-ketoacyl synthase ABED_RS09595 SM00822 ABED_RS09595 ABED_RS09660 SM00937 ABED_RS09660 ABED_RS09735 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS09760 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABED_RS09785 SM00387 Histidine kinase-like ATPases ABED_RS09785 SM00388 His Kinase A (phosphoacceptor) domain ABED_RS09790 SM00448 cheY-homologous receiver domain ABED_RS09790 SM00862 Transcriptional regulatory protein, C terminal ABED_RS09795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABED_RS09830 SM00382 ATPases associated with a variety of cellular activities ABED_RS09860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABED_RS09860 SM00245 tail specific protease ABED_RS09875 SM01211 ABED_RS09875 ABED_RS09885 SM00563 Phosphate acyltransferases ABED_RS09905 SM00836 DALR anticodon binding domain ABED_RS09905 SM01016 Arginyl tRNA synthetase N terminal dom ABED_RS09920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABED_RS09945 SM00830 Chorismate mutase type II ABED_RS09955 SM00861 Transketolase, pyrimidine binding domain ABED_RS09985 SM00100 Cyclic nucleotide-monophosphate binding domain ABED_RS09985 SM00419 helix_turn_helix, cAMP Regulatory protein ABED_RS09995 SM00986 Uracil DNA glycosylase superfamily ABED_RS09995 SM00987 UreE urease accessory protein, C-terminal domain ABED_RS10055 SM00267 diguanylate cyclase ABED_RS10075 SM00965 Secretin and TonB N terminus short domain ABED_RS10155 SM00327 von Willebrand factor (vWF) type A domain ABED_RS10215 SM00052 Putative diguanylate phosphodiesterase ABED_RS10215 SM00267 diguanylate cyclase ABED_RS10230 SM00925 MltA specific insert domain ABED_RS10285 SM00248 ankyrin repeats ABED_RS10290 SM00487 DEAD-like helicases superfamily ABED_RS10290 SM00490 helicase superfamily c-terminal domain ABED_RS10390 SM01228 ABED_RS10390 ABED_RS10410 SM00382 ATPases associated with a variety of cellular activities ABED_RS10410 SM00994 ClpX C4-type zinc finger ABED_RS10410 SM01086 C-terminal, D2-small domain, of ClpB protein ABED_RS10445 SM00518 AP endonuclease family 2 ABED_RS10480 SM00671 Sel1-like repeats. ABED_RS10485 SM00671 Sel1-like repeats. ABED_RS10495 SM00382 ATPases associated with a variety of cellular activities ABED_RS10515 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABED_RS10515 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABED_RS10515 SM00493 ABED_RS10515 ABED_RS10525 SM00729 Elongator protein 3, MiaB family, Radical SAM ABED_RS10525 SM00876 Biotin and Thiamin Synthesis associated domain ABED_RS10540 SM01192 ABED_RS10540 ABED_RS10540 SM01193 ABED_RS10540 ABED_RS10545 SM00382 ATPases associated with a variety of cellular activities ABED_RS10590 SM01209 ABED_RS10590 ABED_RS10655 SM00481 DNA polymerase alpha chain like domain ABED_RS10785 SM00857 Resolvase, N terminal domain ABED_RS10815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABED_RS10840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABED_RS10845 SM00450 Rhodanese Homology Domain ABED_RS10850 SM00460 Transglutaminase/protease-like homologues ABED_RS10860 SM00460 Transglutaminase/protease-like homologues ABED_RS10865 SM00382 ATPases associated with a variety of cellular activities ABED_RS10885 SM00052 Putative diguanylate phosphodiesterase ABED_RS10910 SM00382 ATPases associated with a variety of cellular activities ABED_RS10925 SM00062 Bacterial periplasmic substrate-binding proteins ABED_RS10935 SM00382 ATPases associated with a variety of cellular activities ABED_RS10950 SM00062 Bacterial periplasmic substrate-binding proteins ABED_RS11010 SM00965 Secretin and TonB N terminus short domain ABED_RS11025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABED_RS11025 SM00091 PAS domain ABED_RS11025 SM00267 diguanylate cyclase ABED_RS11070 SM00448 cheY-homologous receiver domain ABED_RS11070 SM00862 Transcriptional regulatory protein, C terminal ABED_RS11075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABED_RS11085 SM00342 helix_turn_helix, arabinose operon control protein ABED_RS11090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.