locus-tag class description ABU_RS00005 PF00308 Bacterial dnaA protein ABU_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ABU_RS00005 PF11638 DnaA N-terminal domain ABU_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ABU_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ABU_RS00010 PF02767 DNA polymerase III beta subunit, central domain ABU_RS00015 PF00204 DNA gyrase B ABU_RS00015 PF01751 Toprim domain ABU_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ABU_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS00025 PF14489 QueF-like protein ABU_RS00035 PF09335 SNARE associated Golgi protein ABU_RS00040 PF13649 Methyltransferase domain ABU_RS00045 PF00005 ABC transporter ABU_RS00045 PF08402 TOBE domain ABU_RS00050 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS00065 PF03459 TOBE domain ABU_RS00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU_RS00075 PF03466 LysR substrate binding domain ABU_RS00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU_RS00090 PF00849 RNA pseudouridylate synthase ABU_RS00095 PF10397 Adenylosuccinate lyase C-terminus ABU_RS00095 PF00206 Lyase ABU_RS00100 PF02867 Ribonucleotide reductase, barrel domain ABU_RS00100 PF03477 ATP cone domain ABU_RS00100 PF00317 Ribonucleotide reductase, all-alpha domain ABU_RS00105 PF00268 Ribonucleotide reductase, small chain ABU_RS00125 PF00691 OmpA family ABU_RS00125 PF18393 MotY N-terminal domain ABU_RS00135 PF08240 Alcohol dehydrogenase GroES-like domain ABU_RS00135 PF00107 Zinc-binding dehydrogenase ABU_RS00140 PF01638 HxlR-like helix-turn-helix ABU_RS00145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABU_RS00145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABU_RS00150 PF02934 GatB/GatE catalytic domain ABU_RS00150 PF02637 GatB domain ABU_RS00165 PF02652 L-lactate permease ABU_RS00170 PF00072 Response regulator receiver domain ABU_RS00170 PF00486 Transcriptional regulatory protein, C terminal ABU_RS00175 PF00989 PAS fold ABU_RS00175 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS00180 PF02589 LUD domain ABU_RS00185 PF13183 4Fe-4S dicluster domain ABU_RS00185 PF11870 Domain of unknown function (DUF3390) ABU_RS00185 PF02589 LUD domain ABU_RS00190 PF02754 Cysteine-rich domain ABU_RS00195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU_RS00200 PF00364 Biotin-requiring enzyme ABU_RS00205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU_RS00205 PF02785 Biotin carboxylase C-terminal domain ABU_RS00205 PF00289 Biotin carboxylase, N-terminal domain ABU_RS00210 PF00270 DEAD/DEAH box helicase ABU_RS00210 PF00271 Helicase conserved C-terminal domain ABU_RS00215 PF01384 Phosphate transporter family ABU_RS00225 PF13537 Glutamine amidotransferase domain ABU_RS00225 PF00733 Asparagine synthase ABU_RS00235 PF02562 PhoH-like protein ABU_RS00235 PF13638 PIN domain ABU_RS00240 PF03653 Uncharacterised protein family (UPF0093) ABU_RS00245 PF12002 MgsA AAA+ ATPase C terminal ABU_RS00245 PF01661 Macro domain ABU_RS00245 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABU_RS00245 PF16193 AAA C-terminal domain ABU_RS00250 PF00849 RNA pseudouridylate synthase ABU_RS00250 PF01479 S4 domain ABU_RS00255 PF01380 SIS domain ABU_RS00255 PF00571 CBS domain ABU_RS00260 PF17770 Ribonuclease J C-terminal domain ABU_RS00260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABU_RS00260 PF00753 Metallo-beta-lactamase superfamily ABU_RS00265 PF00398 Ribosomal RNA adenine dimethylase ABU_RS00270 PF00977 Histidine biosynthesis protein ABU_RS00285 PF04055 Radical SAM superfamily ABU_RS00290 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABU_RS00295 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABU_RS00300 PF00072 Response regulator receiver domain ABU_RS00300 PF00486 Transcriptional regulatory protein, C terminal ABU_RS00305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS00325 PF00873 AcrB/AcrD/AcrF family ABU_RS00330 PF04264 YceI-like domain ABU_RS00355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABU_RS00355 PF03129 Anticodon binding domain ABU_RS00355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU_RS00360 PF05198 Translation initiation factor IF-3, N-terminal domain ABU_RS00360 PF00707 Translation initiation factor IF-3, C-terminal domain ABU_RS00365 PF01632 Ribosomal protein L35 ABU_RS00370 PF00453 Ribosomal protein L20 ABU_RS00385 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS00390 PF12804 MobA-like NTP transferase domain ABU_RS00395 PF00330 Aconitase family (aconitate hydratase) ABU_RS00400 PF01252 Signal peptidase (SPase) II ABU_RS00405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABU_RS00405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABU_RS00405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABU_RS00405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABU_RS00410 PF01649 Ribosomal protein S20 ABU_RS00415 PF03462 PCRF domain ABU_RS00415 PF00472 RF-1 domain ABU_RS00425 PF12849 PBP superfamily domain ABU_RS00430 PF12792 CSS motif domain associated with EAL ABU_RS00430 PF00563 EAL domain ABU_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS00445 PF00005 ABC transporter ABU_RS00450 PF01895 PhoU domain ABU_RS00460 PF00072 Response regulator receiver domain ABU_RS00460 PF00486 Transcriptional regulatory protein, C terminal ABU_RS00465 PF16736 Single Cache-like ABU_RS00465 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS00465 PF00989 PAS fold ABU_RS00470 PF00572 Ribosomal protein L13 ABU_RS00475 PF00380 Ribosomal protein S9/S16 ABU_RS00480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABU_RS00485 PF13419 Haloacid dehalogenase-like hydrolase ABU_RS00505 PF01970 Tripartite tricarboxylate transporter TctA family ABU_RS00510 PF01627 Hpt domain ABU_RS00510 PF00072 Response regulator receiver domain ABU_RS00510 PF00486 Transcriptional regulatory protein, C terminal ABU_RS00515 PF08448 PAS fold ABU_RS00515 PF08447 PAS fold ABU_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS00520 PF00484 Carbonic anhydrase ABU_RS00540 PF09383 NIL domain ABU_RS00540 PF00005 ABC transporter ABU_RS00545 PF02405 Permease MlaE ABU_RS00560 PF02664 S-Ribosylhomocysteinase (LuxS) ABU_RS00575 PF00768 D-alanyl-D-alanine carboxypeptidase ABU_RS00575 PF07943 Penicillin-binding protein 5, C-terminal domain ABU_RS00590 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABU_RS00590 PF00809 Pterin binding enzyme ABU_RS00590 PF02310 B12 binding domain ABU_RS00590 PF02574 Homocysteine S-methyltransferase ABU_RS00590 PF02607 B12 binding domain ABU_RS00595 PF01063 Amino-transferase class IV ABU_RS00610 PF01502 Phosphoribosyl-AMP cyclohydrolase ABU_RS00610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABU_RS00620 PF01883 Iron-sulfur cluster assembly protein ABU_RS00620 PF10609 NUBPL iron-transfer P-loop NTPase ABU_RS00625 PF01964 Radical SAM ThiC family ABU_RS00635 PF02542 YgbB family ABU_RS00635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABU_RS00645 PF04608 Phosphatidylglycerophosphatase A ABU_RS00655 PF00117 Glutamine amidotransferase class-I ABU_RS00655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABU_RS00665 PF00709 Adenylosuccinate synthetase ABU_RS00670 PF13393 Histidyl-tRNA synthetase ABU_RS00675 PF00266 Aminotransferase class-V ABU_RS00680 PF04264 YceI-like domain ABU_RS00685 PF01047 MarR family ABU_RS00690 PF04264 YceI-like domain ABU_RS00700 PF17954 Quercetinase C-terminal cupin domain ABU_RS00700 PF02678 Pirin ABU_RS00705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU_RS00705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABU_RS00710 PF00586 AIR synthase related protein, N-terminal domain ABU_RS00710 PF02769 AIR synthase related protein, C-terminal domain ABU_RS00715 PF17284 Spermidine synthase tetramerisation domain ABU_RS00720 PF01121 Dephospho-CoA kinase ABU_RS00725 PF01678 Diaminopimelate epimerase ABU_RS00730 PF02222 ATP-grasp domain ABU_RS00735 PF00583 Acetyltransferase (GNAT) family ABU_RS00770 PF01197 Ribosomal protein L31 ABU_RS00775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU_RS00780 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABU_RS00780 PF00588 SpoU rRNA Methylase family ABU_RS00790 PF00155 Aminotransferase class I and II ABU_RS00795 PF00742 Homoserine dehydrogenase ABU_RS00795 PF03447 Homoserine dehydrogenase, NAD binding domain ABU_RS00795 PF01842 ACT domain ABU_RS00810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABU_RS00810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABU_RS00810 PF13288 DXP reductoisomerase C-terminal domain ABU_RS00825 PF00814 Glycoprotease family ABU_RS00830 PF01253 Translation initiation factor SUI1 ABU_RS00835 PF03853 YjeF-related protein N-terminus ABU_RS00835 PF01256 Carbohydrate kinase ABU_RS00840 PF03091 CutA1 divalent ion tolerance protein ABU_RS00845 PF05690 Thiazole biosynthesis protein ThiG ABU_RS00885 PF02436 Conserved carboxylase domain ABU_RS00885 PF00682 HMGL-like ABU_RS00895 PF12833 Helix-turn-helix domain ABU_RS00900 PF01699 Sodium/calcium exchanger protein ABU_RS00905 PF17200 Single Cache domain 2 ABU_RS00905 PF00672 HAMP domain ABU_RS00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS00910 PF08463 EcoEI R protein C-terminal ABU_RS00910 PF00271 Helicase conserved C-terminal domain ABU_RS00910 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ABU_RS00910 PF04851 Type III restriction enzyme, res subunit ABU_RS00915 PF02780 Transketolase, C-terminal domain ABU_RS00915 PF02779 Transketolase, pyrimidine binding domain ABU_RS00915 PF00456 Transketolase, thiamine diphosphate binding domain ABU_RS00920 PF03788 LrgA family ABU_RS00925 PF04172 LrgB-like family ABU_RS00935 PF03994 Domain of Unknown Function (DUF350) ABU_RS00940 PF00375 Sodium:dicarboxylate symporter family ABU_RS00970 PF01553 Acyltransferase ABU_RS00970 PF13193 AMP-binding enzyme C-terminal domain ABU_RS00970 PF00501 AMP-binding enzyme ABU_RS00975 PF01966 HD domain ABU_RS00975 PF08335 GlnD PII-uridylyltransferase ABU_RS00990 PF12796 Ankyrin repeats (3 copies) ABU_RS00995 PF00543 Nitrogen regulatory protein P-II ABU_RS01005 PF02154 Flagellar motor switch protein FliM ABU_RS01005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABU_RS01010 PF02119 Flagellar P-ring protein ABU_RS01020 PF01313 Bacterial export proteins, family 3 ABU_RS01045 PF02107 Flagellar L-ring protein ABU_RS01055 PF07196 Flagellin hook IN motif ABU_RS01055 PF07195 Flagellar hook-associated protein 2 C-terminus ABU_RS01055 PF02465 Flagellar hook-associated protein 2 N-terminus ABU_RS01060 PF02561 Flagellar protein FliS ABU_RS01070 PF01171 PP-loop family ABU_RS01075 PF04055 Radical SAM superfamily ABU_RS01075 PF00919 Uncharacterized protein family UPF0004 ABU_RS01075 PF18693 TRAM domain ABU_RS01080 PF02569 Pantoate-beta-alanine ligase ABU_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS01090 PF01648 4'-phosphopantetheinyl transferase superfamily ABU_RS01095 PF03616 Sodium/glutamate symporter ABU_RS01100 PF03652 Holliday junction resolvase ABU_RS01115 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABU_RS01120 PF01474 Class-II DAHP synthetase family ABU_RS01125 PF03502 Nucleoside-specific channel-forming protein, Tsx ABU_RS01145 PF03960 ArsC family ABU_RS01150 PF02686 Glu-tRNAGln amidotransferase C subunit ABU_RS01155 PF01702 Queuine tRNA-ribosyltransferase ABU_RS01165 PF00155 Aminotransferase class I and II ABU_RS01175 PF02875 Mur ligase family, glutamate ligase domain ABU_RS01175 PF08245 Mur ligase middle domain ABU_RS01175 PF01225 Mur ligase family, catalytic domain ABU_RS01185 PF04748 Divergent polysaccharide deacetylase ABU_RS01190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABU_RS01190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABU_RS01195 PF00773 RNB domain ABU_RS01200 PF02623 FliW protein ABU_RS01210 PF01250 Ribosomal protein S6 ABU_RS01215 PF00436 Single-strand binding protein family ABU_RS01220 PF01084 Ribosomal protein S18 ABU_RS01230 PF01406 tRNA synthetases class I (C) catalytic domain ABU_RS01230 PF09190 DALR domain ABU_RS01235 PF13184 NusA-like KH domain ABU_RS01235 PF08529 NusA N-terminal domain ABU_RS01245 PF01938 TRAM domain ABU_RS01245 PF04055 Radical SAM superfamily ABU_RS01245 PF00919 Uncharacterized protein family UPF0004 ABU_RS01250 PF04028 Domain of unknown function (DUF374) ABU_RS01260 PF04055 Radical SAM superfamily ABU_RS01270 PF00484 Carbonic anhydrase ABU_RS01275 PF00155 Aminotransferase class I and II ABU_RS01280 PF02021 Uncharacterised protein family UPF0102 ABU_RS01285 PF05690 Thiazole biosynthesis protein ThiG ABU_RS01285 PF02597 ThiS family ABU_RS01295 PF00224 Pyruvate kinase, barrel domain ABU_RS01295 PF00391 PEP-utilising enzyme, mobile domain ABU_RS01295 PF02887 Pyruvate kinase, alpha/beta domain ABU_RS01300 PF00202 Aminotransferase class-III ABU_RS01310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABU_RS01310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABU_RS01315 PF00425 chorismate binding enzyme ABU_RS01330 PF01063 Amino-transferase class IV ABU_RS01335 PF03831 PhnA domain ABU_RS01335 PF08274 PhnA Zinc-Ribbon ABU_RS01340 PF01863 Protein of unknown function DUF45 ABU_RS01345 PF01925 Sulfite exporter TauE/SafE ABU_RS01370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU_RS01370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABU_RS01385 PF00285 Citrate synthase, C-terminal domain ABU_RS01390 PF00330 Aconitase family (aconitate hydratase) ABU_RS01390 PF00694 Aconitase C-terminal domain ABU_RS01395 PF04303 PrpF protein ABU_RS01415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABU_RS01415 PF03900 Porphobilinogen deaminase, C-terminal domain ABU_RS01425 PF12170 DNA polymerase III tau subunit V interacting with alpha ABU_RS01425 PF12169 DNA polymerase III subunits gamma and tau domain III ABU_RS01430 PF01177 Asp/Glu/Hydantoin racemase ABU_RS01435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABU_RS01435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU_RS01440 PF07497 Rho termination factor, RNA-binding domain ABU_RS01440 PF07498 Rho termination factor, N-terminal domain ABU_RS01440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU_RS01445 PF00578 AhpC/TSA family ABU_RS01445 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABU_RS01450 PF00037 4Fe-4S binding domain ABU_RS01455 PF00334 Nucleoside diphosphate kinase ABU_RS01465 PF01783 Ribosomal L32p protein family ABU_RS01470 PF02504 Fatty acid synthesis protein ABU_RS01475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABU_RS01475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABU_RS01485 PF00350 Dynamin family ABU_RS01490 PF00350 Dynamin family ABU_RS01495 PF13183 4Fe-4S dicluster domain ABU_RS01495 PF13085 2Fe-2S iron-sulfur cluster binding domain ABU_RS01500 PF00890 FAD binding domain ABU_RS01500 PF02910 Fumarate reductase flavoprotein C-term ABU_RS01505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABU_RS01510 PF00361 Proton-conducting membrane transporter ABU_RS01515 PF00361 Proton-conducting membrane transporter ABU_RS01515 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABU_RS01520 PF00361 Proton-conducting membrane transporter ABU_RS01520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABU_RS01525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABU_RS01530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABU_RS01535 PF12838 4Fe-4S dicluster domain ABU_RS01540 PF00146 NADH dehydrogenase ABU_RS01545 PF00384 Molybdopterin oxidoreductase ABU_RS01545 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU_RS01545 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABU_RS01550 PF00285 Citrate synthase, C-terminal domain ABU_RS01555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABU_RS01555 PF10531 SLBB domain ABU_RS01555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABU_RS01565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABU_RS01565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABU_RS01570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABU_RS01575 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABU_RS01580 PF00155 Aminotransferase class I and II ABU_RS01585 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABU_RS01590 PF12821 Threonine/Serine exporter, ThrE ABU_RS01590 PF06738 Putative threonine/serine exporter ABU_RS01595 PF06738 Putative threonine/serine exporter ABU_RS01605 PF03309 Type III pantothenate kinase ABU_RS01610 PF01634 ATP phosphoribosyltransferase ABU_RS01620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS01620 PF00672 HAMP domain ABU_RS01620 PF02203 Tar ligand binding domain homologue ABU_RS01625 PF06977 SdiA-regulated ABU_RS01635 PF00579 tRNA synthetases class I (W and Y) ABU_RS01640 PF00593 TonB dependent receptor ABU_RS01655 PF13649 Methyltransferase domain ABU_RS01665 PF00593 TonB dependent receptor ABU_RS01665 PF07715 TonB-dependent Receptor Plug Domain ABU_RS01675 PF02659 Putative manganese efflux pump ABU_RS01680 PF07690 Major Facilitator Superfamily ABU_RS01690 PF00005 ABC transporter ABU_RS01690 PF00664 ABC transporter transmembrane region ABU_RS01695 PF04954 Siderophore-interacting protein ABU_RS01695 PF08021 Siderophore-interacting FAD-binding domain ABU_RS01695 PF00005 ABC transporter ABU_RS01695 PF00664 ABC transporter transmembrane region ABU_RS01700 PF00593 TonB dependent receptor ABU_RS01700 PF07715 TonB-dependent Receptor Plug Domain ABU_RS01720 PF01545 Cation efflux family ABU_RS01725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU_RS01725 PF02403 Seryl-tRNA synthetase N-terminal domain ABU_RS01730 PF01578 Cytochrome C assembly protein ABU_RS01730 PF05140 ResB-like family ABU_RS01735 PF02335 Cytochrome c552 ABU_RS01740 PF03264 NapC/NirT cytochrome c family, N-terminal region ABU_RS01750 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS01750 PF10442 FIST C domain ABU_RS01750 PF08495 FIST N domain ABU_RS01750 PF00563 EAL domain ABU_RS01755 PF08447 PAS fold ABU_RS01755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS01775 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ABU_RS01780 PF00037 4Fe-4S binding domain ABU_RS01780 PF12801 4Fe-4S binding domain ABU_RS01785 PF12838 4Fe-4S dicluster domain ABU_RS01785 PF12800 4Fe-4S binding domain ABU_RS01790 PF00384 Molybdopterin oxidoreductase ABU_RS01790 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABU_RS01790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS01790 PF01568 Molydopterin dinucleotide binding domain ABU_RS01795 PF03480 Bacterial extracellular solute-binding protein, family 7 ABU_RS01800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABU_RS01805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABU_RS01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS01810 PF08447 PAS fold ABU_RS01810 PF08448 PAS fold ABU_RS01815 PF00072 Response regulator receiver domain ABU_RS01820 PF03737 Aldolase/RraA ABU_RS01825 PF14824 Sirohaem biosynthesis protein central ABU_RS01825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABU_RS01825 PF10414 Sirohaem synthase dimerisation region ABU_RS01835 PF00027 Cyclic nucleotide-binding domain ABU_RS01835 PF13545 Crp-like helix-turn-helix domain ABU_RS01840 PF00591 Glycosyl transferase family, a/b domain ABU_RS01840 PF02885 Glycosyl transferase family, helical bundle domain ABU_RS01845 PF06463 Molybdenum Cofactor Synthesis C ABU_RS01845 PF04055 Radical SAM superfamily ABU_RS01850 PF00312 Ribosomal protein S15 ABU_RS01865 PF13380 CoA binding domain ABU_RS01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS01870 PF08521 Two-component sensor kinase N-terminal ABU_RS01870 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS01875 PF00486 Transcriptional regulatory protein, C terminal ABU_RS01875 PF00072 Response regulator receiver domain ABU_RS01880 PF00639 PPIC-type PPIASE domain ABU_RS01885 PF01116 Fructose-bisphosphate aldolase class-II ABU_RS01890 PF00171 Aldehyde dehydrogenase family ABU_RS01900 PF02472 Biopolymer transport protein ExbD/TolR ABU_RS01905 PF01618 MotA/TolQ/ExbB proton channel family ABU_RS01915 PF01202 Shikimate kinase ABU_RS01920 PF00815 Histidinol dehydrogenase ABU_RS01930 PF00348 Polyprenyl synthetase ABU_RS01935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABU_RS01935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABU_RS01935 PF01488 Shikimate / quinate 5-dehydrogenase ABU_RS01940 PF03129 Anticodon binding domain ABU_RS01940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABU_RS01940 PF04073 Aminoacyl-tRNA editing domain ABU_RS01945 PF00924 Mechanosensitive ion channel ABU_RS01945 PF05552 Conserved TM helix ABU_RS01950 PF01966 HD domain ABU_RS01950 PF12627 Probable RNA and SrmB- binding site of polymerase A ABU_RS01950 PF01743 Poly A polymerase head domain ABU_RS01970 PF02699 Preprotein translocase subunit ABU_RS01975 PF02355 Protein export membrane protein ABU_RS01980 PF02355 Protein export membrane protein ABU_RS01980 PF07549 SecD/SecF GG Motif ABU_RS01995 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABU_RS01995 PF00691 OmpA family ABU_RS02000 PF01618 MotA/TolQ/ExbB proton channel family ABU_RS02010 PF09334 tRNA synthetases class I (M) ABU_RS02010 PF13603 Leucyl-tRNA synthetase, Domain 2 ABU_RS02010 PF00133 tRNA synthetases class I (I, L, M and V) ABU_RS02020 PF08245 Mur ligase middle domain ABU_RS02050 PF00271 Helicase conserved C-terminal domain ABU_RS02050 PF00270 DEAD/DEAH box helicase ABU_RS02050 PF17757 UvrB interaction domain ABU_RS02050 PF02559 CarD-like/TRCF domain ABU_RS02050 PF03461 TRCF domain ABU_RS02070 PF00486 Transcriptional regulatory protein, C terminal ABU_RS02070 PF00072 Response regulator receiver domain ABU_RS02085 PF02743 Cache domain ABU_RS02085 PF00672 HAMP domain ABU_RS02085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS02090 PF00072 Response regulator receiver domain ABU_RS02090 PF02954 Bacterial regulatory protein, Fis family ABU_RS02090 PF00158 Sigma-54 interaction domain ABU_RS02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS02100 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS02100 PF13426 PAS domain ABU_RS02100 PF00672 HAMP domain ABU_RS02105 PF13277 YmdB-like protein ABU_RS02120 PF01209 ubiE/COQ5 methyltransferase family ABU_RS02125 PF13742 OB-fold nucleic acid binding domain ABU_RS02125 PF02601 Exonuclease VII, large subunit ABU_RS02130 PF01584 CheW-like domain ABU_RS02135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABU_RS02140 PF02261 Aspartate decarboxylase ABU_RS02145 PF02575 YbaB/EbfC DNA-binding family ABU_RS02150 PF00348 Polyprenyl synthetase ABU_RS02155 PF00166 Chaperonin 10 Kd subunit ABU_RS02160 PF00118 TCP-1/cpn60 chaperonin family ABU_RS02165 PF18719 ArlS sensor domain ABU_RS02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS02165 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS02170 PF00486 Transcriptional regulatory protein, C terminal ABU_RS02170 PF00072 Response regulator receiver domain ABU_RS02175 PF00149 Calcineurin-like phosphoesterase ABU_RS02200 PF00005 ABC transporter ABU_RS02215 PF00459 Inositol monophosphatase family ABU_RS02220 PF01380 SIS domain ABU_RS02225 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABU_RS02225 PF02772 S-adenosylmethionine synthetase, central domain ABU_RS02225 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABU_RS02230 PF01039 Carboxyl transferase domain ABU_RS02230 PF17848 Acetyl-coA carboxylase zinc finger domain ABU_RS02235 PF02581 Thiamine monophosphate synthase ABU_RS02240 PF02590 Predicted SPOUT methyltransferase ABU_RS02250 PF01207 Dihydrouridine synthase (Dus) ABU_RS02260 PF17862 AAA+ lid domain ABU_RS02260 PF01434 Peptidase family M41 ABU_RS02260 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS02265 PF11849 Domain of unknown function (DUF3369) ABU_RS02270 PF00072 Response regulator receiver domain ABU_RS02270 PF00486 Transcriptional regulatory protein, C terminal ABU_RS02275 PF08447 PAS fold ABU_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS02275 PF08448 PAS fold ABU_RS02280 PF08502 LeuA allosteric (dimerisation) domain ABU_RS02280 PF00682 HMGL-like ABU_RS02295 PF00488 MutS domain V ABU_RS02295 PF05190 MutS family domain IV ABU_RS02295 PF05192 MutS domain III ABU_RS02295 PF05188 MutS domain II ABU_RS02295 PF01624 MutS domain I ABU_RS02300 PF00873 AcrB/AcrD/AcrF family ABU_RS02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS02335 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit ABU_RS02345 PF03412 Peptidase C39 family ABU_RS02345 PF00664 ABC transporter transmembrane region ABU_RS02345 PF00005 ABC transporter ABU_RS02355 PF01266 FAD dependent oxidoreductase ABU_RS02360 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS02365 PF00977 Histidine biosynthesis protein ABU_RS02370 PF08338 Domain of unknown function (DUF1731) ABU_RS02370 PF01370 NAD dependent epimerase/dehydratase family ABU_RS02375 PF00117 Glutamine amidotransferase class-I ABU_RS02390 PF06421 GTP-binding protein LepA C-terminus ABU_RS02390 PF03144 Elongation factor Tu domain 2 ABU_RS02390 PF00679 Elongation factor G C-terminus ABU_RS02390 PF00009 Elongation factor Tu GTP binding domain ABU_RS02395 PF02583 Metal-sensitive transcriptional repressor ABU_RS02400 PF00403 Heavy-metal-associated domain ABU_RS02405 PF00691 OmpA family ABU_RS02405 PF05736 OprF membrane domain ABU_RS02410 PF14572 Phosphoribosyl synthetase-associated domain ABU_RS02410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABU_RS02430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABU_RS02435 PF01321 Creatinase/Prolidase N-terminal domain ABU_RS02435 PF00557 Metallopeptidase family M24 ABU_RS02440 PF01220 Dehydroquinase class II ABU_RS02445 PF01979 Amidohydrolase family ABU_RS02450 PF01343 Peptidase family S49 ABU_RS02460 PF00871 Acetokinase family ABU_RS02465 PF01515 Phosphate acetyl/butaryl transferase ABU_RS02470 PF00871 Acetokinase family ABU_RS02480 PF00871 Acetokinase family ABU_RS02485 PF11490 DNA polymerase III polC-type N-terminus II ABU_RS02485 PF00929 Exonuclease ABU_RS02485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU_RS02485 PF02811 PHP domain ABU_RS02485 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU_RS02485 PF14579 Helix-hairpin-helix motif ABU_RS02485 PF14480 DNA polymerase III polC-type N-terminus I ABU_RS02495 PF00474 Sodium:solute symporter family ABU_RS02505 PF00474 Sodium:solute symporter family ABU_RS02515 PF11490 DNA polymerase III polC-type N-terminus II ABU_RS02515 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU_RS02515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU_RS02515 PF14579 Helix-hairpin-helix motif ABU_RS02515 PF00929 Exonuclease ABU_RS02515 PF02811 PHP domain ABU_RS02525 PF00474 Sodium:solute symporter family ABU_RS02535 PF00072 Response regulator receiver domain ABU_RS02535 PF00486 Transcriptional regulatory protein, C terminal ABU_RS02540 PF00672 HAMP domain ABU_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS02540 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS02540 PF13426 PAS domain ABU_RS02585 PF00994 Probable molybdopterin binding domain ABU_RS02585 PF18146 Damage-inducible protein CinA KH domain ABU_RS02585 PF02464 Competence-damaged protein ABU_RS02590 PF06039 Malate:quinone oxidoreductase (Mqo) ABU_RS02595 PF08264 Anticodon-binding domain of tRNA ABU_RS02595 PF00133 tRNA synthetases class I (I, L, M and V) ABU_RS02610 PF02875 Mur ligase family, glutamate ligase domain ABU_RS02610 PF08245 Mur ligase middle domain ABU_RS02625 PF00248 Aldo/keto reductase family ABU_RS02630 PF01384 Phosphate transporter family ABU_RS02635 PF02203 Tar ligand binding domain homologue ABU_RS02635 PF00672 HAMP domain ABU_RS02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS02645 PF02203 Tar ligand binding domain homologue ABU_RS02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS02645 PF00672 HAMP domain ABU_RS02650 PF03061 Thioesterase superfamily ABU_RS02660 PF01435 Peptidase family M48 ABU_RS02660 PF16491 CAAX prenyl protease N-terminal, five membrane helices ABU_RS02665 PF02646 RmuC family ABU_RS02675 PF00994 Probable molybdopterin binding domain ABU_RS02675 PF03453 MoeA N-terminal region (domain I and II) ABU_RS02675 PF03454 MoeA C-terminal region (domain IV) ABU_RS02685 PF01171 PP-loop family ABU_RS02705 PF00318 Ribosomal protein S2 ABU_RS02710 PF00889 Elongation factor TS ABU_RS02715 PF00005 ABC transporter ABU_RS02725 PF00625 Guanylate kinase ABU_RS02730 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS02730 PF00563 EAL domain ABU_RS02730 PF08448 PAS fold ABU_RS02735 PF00403 Heavy-metal-associated domain ABU_RS02750 PF00005 ABC transporter ABU_RS02750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU_RS02755 PF00762 Ferrochelatase ABU_RS02760 PF07664 Ferrous iron transport protein B C terminus ABU_RS02760 PF02421 Ferrous iron transport protein B ABU_RS02760 PF07670 Nucleoside recognition ABU_RS02770 PF02698 DUF218 domain ABU_RS02775 PF00005 ABC transporter ABU_RS02780 PF00950 ABC 3 transport family ABU_RS02785 PF17783 CvfB-like winged helix domain ABU_RS02785 PF13509 S1 domain ABU_RS02790 PF08534 Redoxin ABU_RS02810 PF00174 Oxidoreductase molybdopterin binding domain ABU_RS02815 PF01794 Ferric reductase like transmembrane component ABU_RS02820 PF13361 UvrD-like helicase C-terminal domain ABU_RS02820 PF00580 UvrD/REP helicase N-terminal domain ABU_RS02825 PF00999 Sodium/hydrogen exchanger family ABU_RS02825 PF02080 TrkA-C domain ABU_RS02825 PF02254 TrkA-N domain ABU_RS02830 PF00174 Oxidoreductase molybdopterin binding domain ABU_RS02870 PF03190 Protein of unknown function, DUF255 ABU_RS02895 PF00753 Metallo-beta-lactamase superfamily ABU_RS02910 PF10458 Valyl tRNA synthetase tRNA binding arm ABU_RS02910 PF08264 Anticodon-binding domain of tRNA ABU_RS02910 PF00133 tRNA synthetases class I (I, L, M and V) ABU_RS02920 PF09962 Uncharacterized conserved protein (DUF2196) ABU_RS02930 PF07690 Major Facilitator Superfamily ABU_RS02935 PF01725 Ham1 family ABU_RS02955 PF03807 NADP oxidoreductase coenzyme F420-dependent ABU_RS02955 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABU_RS02960 PF13525 Outer membrane lipoprotein ABU_RS02965 PF05362 Lon protease (S16) C-terminal proteolytic domain ABU_RS02965 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABU_RS02965 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS02975 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU_RS02990 PF01047 MarR family ABU_RS03005 PF08447 PAS fold ABU_RS03005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03010 PF02203 Tar ligand binding domain homologue ABU_RS03010 PF00672 HAMP domain ABU_RS03010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03015 PF13426 PAS domain ABU_RS03015 PF08447 PAS fold ABU_RS03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU_RS03030 PF02785 Biotin carboxylase C-terminal domain ABU_RS03030 PF00289 Biotin carboxylase, N-terminal domain ABU_RS03035 PF01883 Iron-sulfur cluster assembly protein ABU_RS03040 PF02657 Fe-S metabolism associated domain ABU_RS03045 PF00266 Aminotransferase class-V ABU_RS03055 PF00005 ABC transporter ABU_RS03060 PF01458 Uncharacterized protein family (UPF0051) ABU_RS03065 PF00266 Aminotransferase class-V ABU_RS03070 PF04324 BFD-like [2Fe-2S] binding domain ABU_RS03070 PF01106 NifU-like domain ABU_RS03070 PF01592 NifU-like N terminal domain ABU_RS03075 PF03448 MgtE intracellular N domain ABU_RS03075 PF00571 CBS domain ABU_RS03075 PF01769 Divalent cation transporter ABU_RS03080 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS03080 PF07694 5TMR of 5TMR-LYT ABU_RS03085 PF14698 Argininosuccinate lyase C-terminal ABU_RS03085 PF00206 Lyase ABU_RS03090 PF01584 CheW-like domain ABU_RS03090 PF00072 Response regulator receiver domain ABU_RS03095 PF00899 ThiF family ABU_RS03100 PF01272 Transcription elongation factor, GreA/GreB, C-term ABU_RS03100 PF03449 Transcription elongation factor, N-terminal ABU_RS03110 PF04851 Type III restriction enzyme, res subunit ABU_RS03110 PF00271 Helicase conserved C-terminal domain ABU_RS03110 PF17757 UvrB interaction domain ABU_RS03110 PF12344 Ultra-violet resistance protein B ABU_RS03110 PF02151 UvrB/uvrC motif ABU_RS03115 PF00672 HAMP domain ABU_RS03115 PF02203 Tar ligand binding domain homologue ABU_RS03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03120 PF10576 Iron-sulfur binding domain of endonuclease III ABU_RS03120 PF00633 Helix-hairpin-helix motif ABU_RS03120 PF00730 HhH-GPD superfamily base excision DNA repair protein ABU_RS03140 PF00672 HAMP domain ABU_RS03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03140 PF02203 Tar ligand binding domain homologue ABU_RS03155 PF01627 Hpt domain ABU_RS03155 PF00072 Response regulator receiver domain ABU_RS03155 PF00486 Transcriptional regulatory protein, C terminal ABU_RS03160 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS03160 PF00989 PAS fold ABU_RS03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03165 PF00672 HAMP domain ABU_RS03165 PF02203 Tar ligand binding domain homologue ABU_RS03170 PF00672 HAMP domain ABU_RS03170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03170 PF02203 Tar ligand binding domain homologue ABU_RS03180 PF02502 Ribose/Galactose Isomerase ABU_RS03185 PF10502 Signal peptidase, peptidase S26 ABU_RS03190 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABU_RS03190 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABU_RS03195 PF01386 Ribosomal L25p family ABU_RS03195 PF14693 Ribosomal protein TL5, C-terminal domain ABU_RS03200 PF01195 Peptidyl-tRNA hydrolase ABU_RS03215 PF01520 N-acetylmuramoyl-L-alanine amidase ABU_RS03225 PF01479 S4 domain ABU_RS03225 PF00579 tRNA synthetases class I (W and Y) ABU_RS03230 PF02824 TGS domain ABU_RS03230 PF04607 Region found in RelA / SpoT proteins ABU_RS03230 PF13291 ACT domain ABU_RS03235 PF01192 RNA polymerase Rpb6 ABU_RS03240 PF00696 Amino acid kinase family ABU_RS03250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABU_RS03255 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABU_RS03260 PF00425 chorismate binding enzyme ABU_RS03260 PF04715 Anthranilate synthase component I, N terminal region ABU_RS03270 PF00464 Serine hydroxymethyltransferase ABU_RS03275 PF01336 OB-fold nucleic acid binding domain ABU_RS03275 PF00152 tRNA synthetases class II (D, K and N) ABU_RS03285 PF04551 GcpE protein ABU_RS03290 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS03295 PF03796 DnaB-like helicase C terminal domain ABU_RS03295 PF00772 DnaB-like helicase N terminal domain ABU_RS03300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABU_RS03300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABU_RS03300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABU_RS03305 PF01370 NAD dependent epimerase/dehydratase family ABU_RS03310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABU_RS03310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABU_RS03310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABU_RS03315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABU_RS03315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABU_RS03320 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS03325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU_RS03330 PF01266 FAD dependent oxidoreductase ABU_RS03335 PF16363 GDP-mannose 4,6 dehydratase ABU_RS03340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU_RS03345 PF00733 Asparagine synthase ABU_RS03345 PF13537 Glutamine amidotransferase domain ABU_RS03360 PF00117 Glutamine amidotransferase class-I ABU_RS03365 PF00977 Histidine biosynthesis protein ABU_RS03380 PF00005 ABC transporter ABU_RS03380 PF00664 ABC transporter transmembrane region ABU_RS03385 PF01757 Acyltransferase family ABU_RS03390 PF13439 Glycosyltransferase Family 4 ABU_RS03390 PF00534 Glycosyl transferases group 1 ABU_RS03395 PF00733 Asparagine synthase ABU_RS03395 PF13537 Glutamine amidotransferase domain ABU_RS03420 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS03435 PF00534 Glycosyl transferases group 1 ABU_RS03435 PF13439 Glycosyltransferase Family 4 ABU_RS03440 PF00958 GMP synthase C terminal domain ABU_RS03440 PF00117 Glutamine amidotransferase class-I ABU_RS03440 PF02540 NAD synthase ABU_RS03445 PF00117 Glutamine amidotransferase class-I ABU_RS03450 PF00977 Histidine biosynthesis protein ABU_RS03460 PF02350 UDP-N-acetylglucosamine 2-epimerase ABU_RS03465 PF00535 Glycosyl transferase family 2 ABU_RS03470 PF00953 Glycosyl transferase family 4 ABU_RS03475 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABU_RS03480 PF02719 Polysaccharide biosynthesis protein ABU_RS03490 PF01068 ATP dependent DNA ligase domain ABU_RS03490 PF14743 DNA ligase OB-like domain ABU_RS03495 PF00156 Phosphoribosyl transferase domain ABU_RS03500 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS03510 PF00883 Cytosol aminopeptidase family, catalytic domain ABU_RS03510 PF02789 Cytosol aminopeptidase family, N-terminal domain ABU_RS03520 PF02472 Biopolymer transport protein ExbD/TolR ABU_RS03525 PF01618 MotA/TolQ/ExbB proton channel family ABU_RS03540 PF00005 ABC transporter ABU_RS03540 PF02687 FtsX-like permease family ABU_RS03540 PF12704 MacB-like periplasmic core domain ABU_RS03545 PF00005 ABC transporter ABU_RS03545 PF02687 FtsX-like permease family ABU_RS03545 PF12704 MacB-like periplasmic core domain ABU_RS03590 PF01475 Ferric uptake regulator family ABU_RS03600 PF00206 Lyase ABU_RS03600 PF10415 Fumarase C C-terminus ABU_RS03610 PF13581 Histidine kinase-like ATPase domain ABU_RS03610 PF07568 Histidine kinase ABU_RS03610 PF13426 PAS domain ABU_RS03615 PF00072 Response regulator receiver domain ABU_RS03620 PF00593 TonB dependent receptor ABU_RS03620 PF07715 TonB-dependent Receptor Plug Domain ABU_RS03625 PF18331 PKHD-type hydroxylase C-terminal domain ABU_RS03625 PF13640 2OG-Fe(II) oxygenase superfamily ABU_RS03630 PF01070 FMN-dependent dehydrogenase ABU_RS03635 PF00593 TonB dependent receptor ABU_RS03635 PF07715 TonB-dependent Receptor Plug Domain ABU_RS03640 PF00756 Putative esterase ABU_RS03645 PF13847 Methyltransferase domain ABU_RS03665 PF02554 Carbon starvation protein CstA ABU_RS03665 PF13722 5TM C-terminal transporter carbon starvation CstA ABU_RS03670 PF06071 Protein of unknown function (DUF933) ABU_RS03670 PF01926 50S ribosome-binding GTPase ABU_RS03690 PF06865 Pyrimidine/purine nucleoside phosphorylase ABU_RS03700 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS03700 PF00072 Response regulator receiver domain ABU_RS03705 PF02769 AIR synthase related protein, C-terminal domain ABU_RS03705 PF00586 AIR synthase related protein, N-terminal domain ABU_RS03710 PF01142 tRNA pseudouridine synthase D (TruD) ABU_RS03720 PF02203 Tar ligand binding domain homologue ABU_RS03720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03720 PF00672 HAMP domain ABU_RS03725 PF01330 RuvA N terminal domain ABU_RS03725 PF07499 RuvA, C-terminal domain ABU_RS03730 PF07478 D-ala D-ala ligase C-terminus ABU_RS03730 PF01820 D-ala D-ala ligase N-terminus ABU_RS03740 PF02875 Mur ligase family, glutamate ligase domain ABU_RS03740 PF08245 Mur ligase middle domain ABU_RS03745 PF01230 HIT domain ABU_RS03760 PF00338 Ribosomal protein S10p/S20e ABU_RS03765 PF00297 Ribosomal protein L3 ABU_RS03770 PF00573 Ribosomal protein L4/L1 family ABU_RS03775 PF00276 Ribosomal protein L23 ABU_RS03780 PF00181 Ribosomal Proteins L2, RNA binding domain ABU_RS03780 PF03947 Ribosomal Proteins L2, C-terminal domain ABU_RS03785 PF00203 Ribosomal protein S19 ABU_RS03790 PF00237 Ribosomal protein L22p/L17e ABU_RS03795 PF07650 KH domain ABU_RS03795 PF00189 Ribosomal protein S3, C-terminal domain ABU_RS03800 PF00252 Ribosomal protein L16p/L10e ABU_RS03805 PF00831 Ribosomal L29 protein ABU_RS03810 PF00366 Ribosomal protein S17 ABU_RS03815 PF00238 Ribosomal protein L14p/L23e ABU_RS03820 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABU_RS03820 PF00467 KOW motif ABU_RS03825 PF00673 ribosomal L5P family C-terminus ABU_RS03825 PF00281 Ribosomal protein L5 ABU_RS03830 PF00253 Ribosomal protein S14p/S29e ABU_RS03835 PF00410 Ribosomal protein S8 ABU_RS03840 PF00347 Ribosomal protein L6 ABU_RS03845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABU_RS03850 PF03719 Ribosomal protein S5, C-terminal domain ABU_RS03850 PF00333 Ribosomal protein S5, N-terminal domain ABU_RS03855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABU_RS03860 PF00344 SecY translocase ABU_RS03865 PF00557 Metallopeptidase family M24 ABU_RS03870 PF01176 Translation initiation factor 1A / IF-1 ABU_RS03875 PF03167 Uracil DNA glycosylase superfamily ABU_RS03885 PF01336 OB-fold nucleic acid binding domain ABU_RS03885 PF02938 GAD domain ABU_RS03885 PF00152 tRNA synthetases class II (D, K and N) ABU_RS03895 PF08497 Radical SAM N-terminal ABU_RS03895 PF04055 Radical SAM superfamily ABU_RS03900 PF05191 Adenylate kinase, active site lid ABU_RS03915 PF00302 Chloramphenicol acetyltransferase ABU_RS03920 PF08240 Alcohol dehydrogenase GroES-like domain ABU_RS03920 PF00107 Zinc-binding dehydrogenase ABU_RS03925 PF00465 Iron-containing alcohol dehydrogenase ABU_RS03930 PF00672 HAMP domain ABU_RS03930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03930 PF02203 Tar ligand binding domain homologue ABU_RS03935 PF01168 Alanine racemase, N-terminal domain ABU_RS03935 PF00842 Alanine racemase, C-terminal domain ABU_RS03940 PF08459 UvrC Helix-hairpin-helix N-terminal ABU_RS03940 PF02151 UvrB/uvrC motif ABU_RS03940 PF01541 GIY-YIG catalytic domain ABU_RS03945 PF02203 Tar ligand binding domain homologue ABU_RS03945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03945 PF00672 HAMP domain ABU_RS03955 PF02203 Tar ligand binding domain homologue ABU_RS03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03955 PF00672 HAMP domain ABU_RS03960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS03960 PF00672 HAMP domain ABU_RS03960 PF02203 Tar ligand binding domain homologue ABU_RS03965 PF00072 Response regulator receiver domain ABU_RS03965 PF00486 Transcriptional regulatory protein, C terminal ABU_RS03970 PF00072 Response regulator receiver domain ABU_RS03970 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS03975 PF00072 Response regulator receiver domain ABU_RS03975 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS03975 PF09308 LuxQ, periplasmic ABU_RS03980 PF13344 Haloacid dehalogenase-like hydrolase ABU_RS03980 PF00293 NUDIX domain ABU_RS04005 PF02653 Branched-chain amino acid transport system / permease component ABU_RS04015 PF00005 ABC transporter ABU_RS04015 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABU_RS04020 PF00005 ABC transporter ABU_RS04030 PF01774 UreD urease accessory protein ABU_RS04035 PF00547 Urease, gamma subunit ABU_RS04035 PF00699 Urease beta subunit ABU_RS04040 PF01979 Amidohydrolase family ABU_RS04040 PF00449 Urease alpha-subunit, N-terminal domain ABU_RS04045 PF05194 UreE urease accessory protein, C-terminal domain ABU_RS04055 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABU_RS04070 PF08360 QacR-like protein, C-terminal region ABU_RS04070 PF00440 Bacterial regulatory proteins, tetR family ABU_RS04075 PF00873 AcrB/AcrD/AcrF family ABU_RS04080 PF00529 HlyD membrane-fusion protein of T1SS ABU_RS04080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS04105 PF08448 PAS fold ABU_RS04105 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS04110 PF03372 Endonuclease/Exonuclease/phosphatase family ABU_RS04130 PF08212 Lipocalin-like domain ABU_RS04145 PF03109 ABC1 family ABU_RS04155 PF12792 CSS motif domain associated with EAL ABU_RS04155 PF00563 EAL domain ABU_RS04160 PF04397 LytTr DNA-binding domain ABU_RS04160 PF00072 Response regulator receiver domain ABU_RS04165 PF06580 Histidine kinase ABU_RS04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS04165 PF13492 GAF domain ABU_RS04165 PF07694 5TMR of 5TMR-LYT ABU_RS04170 PF01593 Flavin containing amine oxidoreductase ABU_RS04175 PF03441 FAD binding domain of DNA photolyase ABU_RS04175 PF00875 DNA photolyase ABU_RS04195 PF00342 Phosphoglucose isomerase ABU_RS04200 PF00483 Nucleotidyl transferase ABU_RS04205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABU_RS04205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABU_RS04205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABU_RS04205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABU_RS04235 PF02203 Tar ligand binding domain homologue ABU_RS04235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS04235 PF00672 HAMP domain ABU_RS04240 PF08447 PAS fold ABU_RS04240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS04245 PF01361 Tautomerase enzyme ABU_RS04250 PF03466 LysR substrate binding domain ABU_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU_RS04255 PF00218 Indole-3-glycerol phosphate synthase ABU_RS04265 PF03692 Putative zinc- or iron-chelating domain ABU_RS04270 PF05175 Methyltransferase small domain ABU_RS04280 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ABU_RS04280 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ABU_RS04280 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ABU_RS04285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU_RS04295 PF14579 Helix-hairpin-helix motif ABU_RS04295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU_RS04295 PF11490 DNA polymerase III polC-type N-terminus II ABU_RS04295 PF14480 DNA polymerase III polC-type N-terminus I ABU_RS04295 PF02811 PHP domain ABU_RS04295 PF00929 Exonuclease ABU_RS04295 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU_RS04300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABU_RS04305 PF00834 Ribulose-phosphate 3 epimerase family ABU_RS04310 PF02253 Phospholipase A1 ABU_RS04320 PF00293 NUDIX domain ABU_RS04325 PF04461 Protein of unknown function (DUF520) ABU_RS04335 PF04241 Protein of unknown function (DUF423) ABU_RS04340 PF00156 Phosphoribosyl transferase domain ABU_RS04355 PF01168 Alanine racemase, N-terminal domain ABU_RS04360 PF17820 PDZ domain ABU_RS04360 PF02163 Peptidase family M50 ABU_RS04365 PF01066 CDP-alcohol phosphatidyltransferase ABU_RS04375 PF00701 Dihydrodipicolinate synthetase family ABU_RS04385 PF01180 Dihydroorotate dehydrogenase ABU_RS04390 PF00664 ABC transporter transmembrane region ABU_RS04390 PF00005 ABC transporter ABU_RS04395 PF03023 Lipid II flippase MurJ ABU_RS04410 PF02130 Uncharacterized protein family UPF0054 ABU_RS04420 PF03575 Peptidase family S51 ABU_RS04425 PF18073 Rubredoxin metal binding domain ABU_RS04430 PF05728 Uncharacterised protein family (UPF0227) ABU_RS04435 PF03150 Di-haem cytochrome c peroxidase ABU_RS04435 PF00034 Cytochrome c ABU_RS04435 PF14376 Haem-binding domain ABU_RS04440 PF03707 Bacterial signalling protein N terminal repeat ABU_RS04440 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS04440 PF00563 EAL domain ABU_RS04450 PF00448 SRP54-type protein, GTPase domain ABU_RS04455 PF00578 AhpC/TSA family ABU_RS04460 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABU_RS04465 PF12072 Domain of unknown function (DUF3552) ABU_RS04465 PF00013 KH domain ABU_RS04465 PF01966 HD domain ABU_RS04475 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS04475 PF12911 N-terminal TM domain of oligopeptide transport permease C ABU_RS04500 PF00106 short chain dehydrogenase ABU_RS04515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU_RS04525 PF00072 Response regulator receiver domain ABU_RS04525 PF00486 Transcriptional regulatory protein, C terminal ABU_RS04530 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS04535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABU_RS04535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABU_RS04540 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS04545 PF09424 Yqey-like protein ABU_RS04550 PF00005 ABC transporter ABU_RS04550 PF12848 ABC transporter ABU_RS04550 PF16326 ABC transporter C-terminal domain ABU_RS04560 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS04565 PF00561 alpha/beta hydrolase fold ABU_RS04590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABU_RS04615 PF00958 GMP synthase C terminal domain ABU_RS04615 PF00117 Glutamine amidotransferase class-I ABU_RS04615 PF02540 NAD synthase ABU_RS04620 PF00890 FAD binding domain ABU_RS04635 PF00155 Aminotransferase class I and II ABU_RS04640 PF16916 Dimerisation domain of Zinc Transporter ABU_RS04640 PF01545 Cation efflux family ABU_RS04645 PF01966 HD domain ABU_RS04645 PF00072 Response regulator receiver domain ABU_RS04650 PF00211 Adenylate and Guanylate cyclase catalytic domain ABU_RS04675 PF07690 Major Facilitator Superfamily ABU_RS04685 PF13190 PDGLE domain ABU_RS04685 PF01891 Cobalt uptake substrate-specific transmembrane region ABU_RS04700 PF00005 ABC transporter ABU_RS04705 PF17287 POTRA domain ABU_RS04705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABU_RS04705 PF08479 POTRA domain, ShlB-type ABU_RS04710 PF15526 Novel toxin 21 ABU_RS04710 PF05860 haemagglutination activity domain ABU_RS04710 PF05594 Haemagluttinin repeat ABU_RS04710 PF13332 Hemagglutinin repeat ABU_RS04710 PF04829 Pre-toxin domain with VENN motif ABU_RS04710 PF13332 Hemagglutinin repeat ABU_RS04710 PF05594 Haemagluttinin repeat ABU_RS04710 PF04829 Pre-toxin domain with VENN motif ABU_RS04710 PF15526 Novel toxin 21 ABU_RS04710 PF05860 haemagglutination activity domain ABU_RS04775 PF01594 AI-2E family transporter ABU_RS04800 PF17755 UvrA DNA-binding domain ABU_RS04800 PF17760 UvrA interaction domain ABU_RS04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS04810 PF08447 PAS fold ABU_RS04820 PF01925 Sulfite exporter TauE/SafE ABU_RS04825 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS04825 PF06426 Serine acetyltransferase, N-terminal ABU_RS04830 PF17810 Arginine decarboxylase helical bundle domain ABU_RS04830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABU_RS04830 PF17944 Arginine decarboxylase C-terminal helical extension ABU_RS04835 PF13393 Histidyl-tRNA synthetase ABU_RS04835 PF03129 Anticodon binding domain ABU_RS04840 PF02223 Thymidylate kinase ABU_RS04845 PF01467 Cytidylyltransferase-like ABU_RS04850 PF02441 Flavoprotein ABU_RS04860 PF03948 Ribosomal protein L9, C-terminal domain ABU_RS04860 PF01281 Ribosomal protein L9, N-terminal domain ABU_RS04865 PF00227 Proteasome subunit ABU_RS04870 PF10431 C-terminal, D2-small domain, of ClpB protein ABU_RS04870 PF07724 AAA domain (Cdc48 subfamily) ABU_RS04880 PF01026 TatD related DNase ABU_RS04890 PF05036 Sporulation related domain ABU_RS04890 PF03330 Lytic transglycolase ABU_RS04895 PF00475 Imidazoleglycerol-phosphate dehydratase ABU_RS04915 PF01926 50S ribosome-binding GTPase ABU_RS04920 PF00583 Acetyltransferase (GNAT) family ABU_RS04940 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABU_RS04945 PF00392 Bacterial regulatory proteins, gntR family ABU_RS04945 PF00155 Aminotransferase class I and II ABU_RS04965 PF00873 AcrB/AcrD/AcrF family ABU_RS04970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS04970 PF00529 HlyD membrane-fusion protein of T1SS ABU_RS04980 PF11849 Domain of unknown function (DUF3369) ABU_RS04985 PF00813 FliP family ABU_RS04990 PF00905 Penicillin binding protein transpeptidase domain ABU_RS04990 PF03717 Penicillin-binding Protein dimerisation domain ABU_RS05010 PF00005 ABC transporter ABU_RS05015 PF02390 Putative methyltransferase ABU_RS05020 PF02903 Alpha amylase, N-terminal ig-like domain ABU_RS05020 PF00128 Alpha amylase, catalytic domain ABU_RS05025 PF01479 S4 domain ABU_RS05025 PF00849 RNA pseudouridylate synthase ABU_RS05030 PF01098 Cell cycle protein ABU_RS05040 PF00202 Aminotransferase class-III ABU_RS05045 PF06865 Pyrimidine/purine nucleoside phosphorylase ABU_RS05065 PF04545 Sigma-70, region 4 ABU_RS05065 PF04539 Sigma-70 region 3 ABU_RS05065 PF00140 Sigma-70 factor, region 1.2 ABU_RS05065 PF04542 Sigma-70 region 2 ABU_RS05070 PF00694 Aconitase C-terminal domain ABU_RS05075 PF00180 Isocitrate/isopropylmalate dehydrogenase ABU_RS05090 PF00444 Ribosomal protein L36 ABU_RS05095 PF00416 Ribosomal protein S13/S18 ABU_RS05100 PF00411 Ribosomal protein S11 ABU_RS05105 PF00163 Ribosomal protein S4/S9 N-terminal domain ABU_RS05105 PF01479 S4 domain ABU_RS05110 PF01000 RNA polymerase Rpb3/RpoA insert domain ABU_RS05110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABU_RS05110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABU_RS05115 PF01196 Ribosomal protein L17 ABU_RS05120 PF01425 Amidase ABU_RS05125 PF00478 IMP dehydrogenase / GMP reductase domain ABU_RS05125 PF00571 CBS domain ABU_RS05145 PF00072 Response regulator receiver domain ABU_RS05145 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05175 PF00684 DnaJ central domain ABU_RS05175 PF01556 DnaJ C terminal domain ABU_RS05175 PF00226 DnaJ domain ABU_RS05185 PF00933 Glycosyl hydrolase family 3 N terminal domain ABU_RS05190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABU_RS05190 PF17203 Single cache domain 3 ABU_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05195 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS05195 PF09456 RcsC Alpha-Beta-Loop (ABL) ABU_RS05195 PF00072 Response regulator receiver domain ABU_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05205 PF00005 ABC transporter ABU_RS05220 PF00107 Zinc-binding dehydrogenase ABU_RS05220 PF08240 Alcohol dehydrogenase GroES-like domain ABU_RS05240 PF01638 HxlR-like helix-turn-helix ABU_RS05245 PF02525 Flavodoxin-like fold ABU_RS05255 PF00893 Small Multidrug Resistance protein ABU_RS05270 PF01161 Phosphatidylethanolamine-binding protein ABU_RS05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU_RS05275 PF03466 LysR substrate binding domain ABU_RS05280 PF03601 Conserved hypothetical protein 698 ABU_RS05295 PF01638 HxlR-like helix-turn-helix ABU_RS05300 PF02525 Flavodoxin-like fold ABU_RS05310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABU_RS05320 PF00881 Nitroreductase family ABU_RS05330 PF00005 ABC transporter ABU_RS05330 PF12848 ABC transporter ABU_RS05335 PF03061 Thioesterase superfamily ABU_RS05340 PF00672 HAMP domain ABU_RS05340 PF02203 Tar ligand binding domain homologue ABU_RS05340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS05345 PF03120 NAD-dependent DNA ligase OB-fold domain ABU_RS05345 PF00533 BRCA1 C Terminus (BRCT) domain ABU_RS05345 PF12826 Helix-hairpin-helix motif ABU_RS05345 PF01653 NAD-dependent DNA ligase adenylation domain ABU_RS05350 PF03738 Glutathionylspermidine synthase preATP-grasp ABU_RS05360 PF01966 HD domain ABU_RS05365 PF02661 Fic/DOC family ABU_RS05365 PF13784 Fic/DOC family N-terminal ABU_RS05370 PF13784 Fic/DOC family N-terminal ABU_RS05370 PF02661 Fic/DOC family ABU_RS05375 PF08501 Shikimate dehydrogenase substrate binding domain ABU_RS05385 PF02578 Multi-copper polyphenol oxidoreductase laccase ABU_RS05390 PF00390 Malic enzyme, N-terminal domain ABU_RS05390 PF01515 Phosphate acetyl/butaryl transferase ABU_RS05390 PF03949 Malic enzyme, NAD binding domain ABU_RS05395 PF00551 Formyl transferase ABU_RS05395 PF01842 ACT domain ABU_RS05400 PF00588 SpoU rRNA Methylase family ABU_RS05425 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05425 PF00072 Response regulator receiver domain ABU_RS05435 PF01145 SPFH domain / Band 7 family ABU_RS05435 PF16200 C-terminal region of band_7 ABU_RS05455 PF01654 Cytochrome bd terminal oxidase subunit I ABU_RS05485 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABU_RS05490 PF01479 S4 domain ABU_RS05490 PF00849 RNA pseudouridylate synthase ABU_RS05495 PF13419 Haloacid dehalogenase-like hydrolase ABU_RS05515 PF07715 TonB-dependent Receptor Plug Domain ABU_RS05515 PF00593 TonB dependent receptor ABU_RS05525 PF00005 ABC transporter ABU_RS05530 PF01032 FecCD transport family ABU_RS05535 PF00300 Histidine phosphatase superfamily (branch 1) ABU_RS05540 PF00664 ABC transporter transmembrane region ABU_RS05540 PF00005 ABC transporter ABU_RS05550 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05550 PF00072 Response regulator receiver domain ABU_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05580 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS05590 PF00271 Helicase conserved C-terminal domain ABU_RS05590 PF00270 DEAD/DEAH box helicase ABU_RS05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05595 PF08447 PAS fold ABU_RS05595 PF08448 PAS fold ABU_RS05600 PF00072 Response regulator receiver domain ABU_RS05600 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05605 PF00691 OmpA family ABU_RS05605 PF05736 OprF membrane domain ABU_RS05610 PF03412 Peptidase C39 family ABU_RS05610 PF00005 ABC transporter ABU_RS05610 PF00664 ABC transporter transmembrane region ABU_RS05620 PF00196 Bacterial regulatory proteins, luxR family ABU_RS05620 PF00072 Response regulator receiver domain ABU_RS05635 PF01761 3-dehydroquinate synthase ABU_RS05645 PF04055 Radical SAM superfamily ABU_RS05645 PF00919 Uncharacterized protein family UPF0004 ABU_RS05650 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS05650 PF17862 AAA+ lid domain ABU_RS05650 PF06480 FtsH Extracellular ABU_RS05650 PF01434 Peptidase family M41 ABU_RS05660 PF00994 Probable molybdopterin binding domain ABU_RS05665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABU_RS05710 PF00005 ABC transporter ABU_RS05710 PF12848 ABC transporter ABU_RS05725 PF00384 Molybdopterin oxidoreductase ABU_RS05725 PF18364 Molybdopterin oxidoreductase N-terminal domain ABU_RS05725 PF01568 Molydopterin dinucleotide binding domain ABU_RS05730 PF00561 alpha/beta hydrolase fold ABU_RS05735 PF00440 Bacterial regulatory proteins, tetR family ABU_RS05735 PF16925 Tetracyclin repressor-like, C-terminal domain ABU_RS05740 PF00488 MutS domain V ABU_RS05740 PF01713 Smr domain ABU_RS05745 PF03471 Transporter associated domain ABU_RS05745 PF00571 CBS domain ABU_RS05745 PF01595 Cyclin M transmembrane N-terminal domain ABU_RS05760 PF01546 Peptidase family M20/M25/M40 ABU_RS05760 PF07687 Peptidase dimerisation domain ABU_RS05765 PF00909 Ammonium Transporter Family ABU_RS05770 PF00543 Nitrogen regulatory protein P-II ABU_RS05780 PF02541 Ppx/GppA phosphatase family ABU_RS05790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU_RS05790 PF00205 Thiamine pyrophosphate enzyme, central domain ABU_RS05790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU_RS05795 PF10369 Small subunit of acetolactate synthase ABU_RS05800 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS05800 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABU_RS05805 PF09397 Ftsk gamma domain ABU_RS05805 PF17854 FtsK alpha domain ABU_RS05805 PF01580 FtsK/SpoIIIE family ABU_RS05810 PF00072 Response regulator receiver domain ABU_RS05810 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05825 PF12282 Signal transduction histidine kinase ABU_RS05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05825 PF07568 Histidine kinase ABU_RS05840 PF00072 Response regulator receiver domain ABU_RS05840 PF00486 Transcriptional regulatory protein, C terminal ABU_RS05860 PF02810 SEC-C motif ABU_RS05865 PF00149 Calcineurin-like phosphoesterase ABU_RS05865 PF12320 Type 5 capsule protein repressor C-terminal domain ABU_RS05870 PF13086 AAA domain ABU_RS05870 PF13087 AAA domain ABU_RS05870 PF13195 Protein of unknown function (DUF4011) ABU_RS05875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABU_RS05880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABU_RS05880 PF01926 50S ribosome-binding GTPase ABU_RS05885 PF01740 STAS domain ABU_RS05885 PF00916 Sulfate permease family ABU_RS05895 PF02844 Phosphoribosylglycinamide synthetase, N domain ABU_RS05895 PF02843 Phosphoribosylglycinamide synthetase, C domain ABU_RS05895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABU_RS05905 PF04453 LPS transport system D ABU_RS05905 PF03968 OstA-like protein ABU_RS05915 PF00013 KH domain ABU_RS05915 PF00575 S1 RNA binding domain ABU_RS05915 PF03725 3' exoribonuclease family, domain 2 ABU_RS05915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABU_RS05915 PF01138 3' exoribonuclease family, domain 1 ABU_RS05920 PF00072 Response regulator receiver domain ABU_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS05925 PF09078 CheY binding ABU_RS05925 PF01584 CheW-like domain ABU_RS05925 PF01627 Hpt domain ABU_RS05925 PF02895 Signal transducing histidine kinase, homodimeric domain ABU_RS05930 PF03705 CheR methyltransferase, all-alpha domain ABU_RS05930 PF01739 CheR methyltransferase, SAM binding domain ABU_RS05935 PF03975 CheD chemotactic sensory transduction ABU_RS05940 PF01339 CheB methylesterase ABU_RS05940 PF00072 Response regulator receiver domain ABU_RS05950 PF07690 Major Facilitator Superfamily ABU_RS05955 PF00589 Phage integrase family ABU_RS05955 PF18644 Phage integrase SAM-like domain ABU_RS05975 PF01432 Peptidase family M3 ABU_RS05980 PF05175 Methyltransferase small domain ABU_RS05980 PF17827 PrmC N-terminal domain ABU_RS05985 PF06969 HemN C-terminal domain ABU_RS05985 PF04055 Radical SAM superfamily ABU_RS05990 PF00293 NUDIX domain ABU_RS05995 PF13840 ACT domain ABU_RS05995 PF00696 Amino acid kinase family ABU_RS05995 PF01842 ACT domain ABU_RS06010 PF00809 Pterin binding enzyme ABU_RS06030 PF01593 Flavin containing amine oxidoreductase ABU_RS06035 PF08212 Lipocalin-like domain ABU_RS06045 PF00106 short chain dehydrogenase ABU_RS06050 PF01842 ACT domain ABU_RS06050 PF02153 Prephenate dehydrogenase ABU_RS06055 PF01103 Surface antigen ABU_RS06055 PF07244 Surface antigen variable number repeat ABU_RS06060 PF04055 Radical SAM superfamily ABU_RS06065 PF05193 Peptidase M16 inactive domain ABU_RS06070 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABU_RS06095 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABU_RS06105 PF00133 tRNA synthetases class I (I, L, M and V) ABU_RS06105 PF09334 tRNA synthetases class I (M) ABU_RS06105 PF01588 Putative tRNA binding domain ABU_RS06125 PF02436 Conserved carboxylase domain ABU_RS06125 PF00682 HMGL-like ABU_RS06130 PF01293 Phosphoenolpyruvate carboxykinase ABU_RS06135 PF00925 GTP cyclohydrolase II ABU_RS06135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABU_RS06155 PF02092 Glycyl-tRNA synthetase beta subunit ABU_RS06165 PF02069 Prokaryotic metallothionein ABU_RS06170 PF02527 rRNA small subunit methyltransferase G ABU_RS06175 PF00925 GTP cyclohydrolase II ABU_RS06180 PF00490 Delta-aminolevulinic acid dehydratase ABU_RS06185 PF00072 Response regulator receiver domain ABU_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS06185 PF13426 PAS domain ABU_RS06190 PF00486 Transcriptional regulatory protein, C terminal ABU_RS06190 PF00072 Response regulator receiver domain ABU_RS06200 PF00317 Ribonucleotide reductase, all-alpha domain ABU_RS06200 PF03477 ATP cone domain ABU_RS06200 PF02867 Ribonucleotide reductase, barrel domain ABU_RS06205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABU_RS06205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABU_RS06210 PF04055 Radical SAM superfamily ABU_RS06210 PF06969 HemN C-terminal domain ABU_RS06225 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABU_RS06230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU_RS06235 PF02540 NAD synthase ABU_RS06250 PF05099 Tellurite resistance protein TerB ABU_RS06250 PF00226 DnaJ domain ABU_RS06265 PF00902 Sec-independent protein translocase protein (TatC) ABU_RS06270 PF02547 Queuosine biosynthesis protein ABU_RS06275 PF00929 Exonuclease ABU_RS06295 PF03781 Sulfatase-modifying factor enzyme 1 ABU_RS06295 PF12867 DinB superfamily ABU_RS06315 PF02754 Cysteine-rich domain ABU_RS06315 PF13183 4Fe-4S dicluster domain ABU_RS06315 PF02665 Nitrate reductase gamma subunit ABU_RS06320 PF01790 Prolipoprotein diacylglyceryl transferase ABU_RS06335 PF01367 5'-3' exonuclease, C-terminal SAM fold ABU_RS06335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABU_RS06335 PF00476 DNA polymerase family A ABU_RS06335 PF01612 3'-5' exonuclease ABU_RS06345 PF02348 Cytidylyltransferase ABU_RS06350 PF10442 FIST C domain ABU_RS06350 PF00563 EAL domain ABU_RS06350 PF08495 FIST N domain ABU_RS06350 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS06355 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABU_RS06355 PF00005 ABC transporter ABU_RS06360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABU_RS06365 PF02885 Glycosyl transferase family, helical bundle domain ABU_RS06365 PF00591 Glycosyl transferase family, a/b domain ABU_RS06380 PF00764 Arginosuccinate synthase ABU_RS06385 PF00501 AMP-binding enzyme ABU_RS06385 PF13193 AMP-binding enzyme C-terminal domain ABU_RS06390 PF03062 MBOAT, membrane-bound O-acyltransferase family ABU_RS06400 PF00550 Phosphopantetheine attachment site ABU_RS06405 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS06410 PF00916 Sulfate permease family ABU_RS06410 PF01740 STAS domain ABU_RS06425 PF02080 TrkA-C domain ABU_RS06425 PF02254 TrkA-N domain ABU_RS06430 PF02386 Cation transport protein ABU_RS06435 PF00486 Transcriptional regulatory protein, C terminal ABU_RS06435 PF00072 Response regulator receiver domain ABU_RS06440 PF13493 Domain of unknown function (DUF4118) ABU_RS06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS06440 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS06440 PF02702 Osmosensitive K+ channel His kinase sensor domain ABU_RS06455 PF13662 Toprim domain ABU_RS06455 PF02132 RecR protein ABU_RS06460 PF00684 DnaJ central domain ABU_RS06460 PF00226 DnaJ domain ABU_RS06460 PF01556 DnaJ C terminal domain ABU_RS06465 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS06485 PF00753 Metallo-beta-lactamase superfamily ABU_RS06495 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS06500 PF08003 Protein of unknown function (DUF1698) ABU_RS06510 PF05140 ResB-like family ABU_RS06510 PF01578 Cytochrome C assembly protein ABU_RS06515 PF01546 Peptidase family M20/M25/M40 ABU_RS06515 PF07687 Peptidase dimerisation domain ABU_RS06525 PF02203 Tar ligand binding domain homologue ABU_RS06525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS06525 PF00672 HAMP domain ABU_RS06535 PF00271 Helicase conserved C-terminal domain ABU_RS06535 PF02810 SEC-C motif ABU_RS06535 PF07517 SecA DEAD-like domain ABU_RS06535 PF01043 SecA preprotein cross-linking domain ABU_RS06535 PF07516 SecA Wing and Scaffold domain ABU_RS06540 PF12704 MacB-like periplasmic core domain ABU_RS06540 PF02687 FtsX-like permease family ABU_RS06550 PF02618 YceG-like family ABU_RS06555 PF03971 Monomeric isocitrate dehydrogenase ABU_RS06560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABU_RS06560 PF00056 lactate/malate dehydrogenase, NAD binding domain ABU_RS06585 PF01795 MraW methylase family ABU_RS06595 PF00216 Bacterial DNA-binding protein ABU_RS06605 PF13356 Arm DNA-binding domain ABU_RS06605 PF00589 Phage integrase family ABU_RS06640 PF00271 Helicase conserved C-terminal domain ABU_RS06750 PF02082 Transcriptional regulator ABU_RS06755 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABU_RS06765 PF01266 FAD dependent oxidoreductase ABU_RS06765 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABU_RS06775 PF00072 Response regulator receiver domain ABU_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS06785 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS06790 PF00226 DnaJ domain ABU_RS06790 PF01556 DnaJ C terminal domain ABU_RS06795 PF13411 MerR HTH family regulatory protein ABU_RS06800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS06805 PF00005 ABC transporter ABU_RS06820 PF03741 Integral membrane protein TerC family ABU_RS06825 PF05525 Branched-chain amino acid transport protein ABU_RS06845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU_RS06845 PF02142 MGS-like domain ABU_RS06845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABU_RS06855 PF06965 Na+/H+ antiporter 1 ABU_RS06865 PF00561 alpha/beta hydrolase fold ABU_RS06870 PF00593 TonB dependent receptor ABU_RS06870 PF07715 TonB-dependent Receptor Plug Domain ABU_RS06880 PF12327 FtsZ family, C-terminal domain ABU_RS06880 PF00091 Tubulin/FtsZ family, GTPase domain ABU_RS06885 PF02491 SHS2 domain inserted in FTSA ABU_RS06905 PF03960 ArsC family ABU_RS06935 PF16326 ABC transporter C-terminal domain ABU_RS06935 PF00005 ABC transporter ABU_RS06935 PF12848 ABC transporter ABU_RS06945 PF14602 Hexapeptide repeat of succinyl-transferase ABU_RS06945 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ABU_RS06950 PF13419 Haloacid dehalogenase-like hydrolase ABU_RS06960 PF00271 Helicase conserved C-terminal domain ABU_RS06960 PF00270 DEAD/DEAH box helicase ABU_RS06960 PF17764 3′ DNA-binding domain (3′BD) ABU_RS06960 PF18074 Primosomal protein N C-terminal domain ABU_RS06960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABU_RS06985 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ABU_RS06990 PF00586 AIR synthase related protein, N-terminal domain ABU_RS06990 PF02769 AIR synthase related protein, C-terminal domain ABU_RS07000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABU_RS07000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABU_RS07005 PF07728 AAA domain (dynein-related subfamily) ABU_RS07005 PF12102 Domain of unknown function (DUF3578) ABU_RS07015 PF01924 Hydrogenase formation hypA family ABU_RS07020 PF01455 HupF/HypC family ABU_RS07025 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABU_RS07035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS07035 PF02203 Tar ligand binding domain homologue ABU_RS07035 PF00672 HAMP domain ABU_RS07050 PF05661 Protein of unknown function (DUF808) ABU_RS07070 PF12823 Domain of unknown function (DUF3817) ABU_RS07080 PF02568 Thiamine biosynthesis protein (ThiI) ABU_RS07080 PF02926 THUMP domain ABU_RS07100 PF00708 Acylphosphatase ABU_RS07100 PF01300 Telomere recombination ABU_RS07100 PF07503 HypF finger ABU_RS07100 PF17788 HypF Kae1-like domain ABU_RS07110 PF01750 Hydrogenase maturation protease ABU_RS07115 PF01292 Prokaryotic cytochrome b561 ABU_RS07120 PF00374 Nickel-dependent hydrogenase ABU_RS07125 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABU_RS07125 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABU_RS07125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABU_RS07145 PF01750 Hydrogenase maturation protease ABU_RS07150 PF01292 Prokaryotic cytochrome b561 ABU_RS07155 PF00374 Nickel-dependent hydrogenase ABU_RS07160 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABU_RS07160 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABU_RS07160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABU_RS07170 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABU_RS07170 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ABU_RS07180 PF06434 Aconitate hydratase 2 N-terminus ABU_RS07180 PF11791 Aconitate B N-terminal domain ABU_RS07180 PF00330 Aconitase family (aconitate hydratase) ABU_RS07190 PF01590 GAF domain ABU_RS07190 PF00563 EAL domain ABU_RS07190 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS07190 PF00360 Phytochrome region ABU_RS07195 PF01709 Transcriptional regulator ABU_RS07200 PF04333 MlaA lipoprotein ABU_RS07215 PF03641 Possible lysine decarboxylase ABU_RS07220 PF13419 Haloacid dehalogenase-like hydrolase ABU_RS07225 PF08534 Redoxin ABU_RS07235 PF02600 Disulfide bond formation protein DsbB ABU_RS07255 PF00593 TonB dependent receptor ABU_RS07255 PF07660 Secretin and TonB N terminus short domain ABU_RS07255 PF07715 TonB-dependent Receptor Plug Domain ABU_RS07260 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS07270 PF02028 BCCT, betaine/carnitine/choline family transporter ABU_RS07275 PF02254 TrkA-N domain ABU_RS07275 PF00999 Sodium/hydrogen exchanger family ABU_RS07285 PF00464 Serine hydroxymethyltransferase ABU_RS07290 PF02805 Metal binding domain of Ada ABU_RS07290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABU_RS07290 PF12833 Helix-turn-helix domain ABU_RS07290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABU_RS07320 PF03594 Benzoate membrane transport protein ABU_RS07325 PF00202 Aminotransferase class-III ABU_RS07330 PF03473 MOSC domain ABU_RS07335 PF04055 Radical SAM superfamily ABU_RS07340 PF10437 Bacterial lipoate protein ligase C-terminus ABU_RS07340 PF03099 Biotin/lipoate A/B protein ligase family ABU_RS07345 PF00456 Transketolase, thiamine diphosphate binding domain ABU_RS07345 PF17831 Pyruvate dehydrogenase E1 component middle domain ABU_RS07350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABU_RS07350 PF00364 Biotin-requiring enzyme ABU_RS07350 PF02817 e3 binding domain ABU_RS07355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABU_RS07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS07360 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABU_RS07365 PF00593 TonB dependent receptor ABU_RS07365 PF07715 TonB-dependent Receptor Plug Domain ABU_RS07370 PF01263 Aldose 1-epimerase ABU_RS07375 PF00905 Penicillin binding protein transpeptidase domain ABU_RS07380 PF00270 DEAD/DEAH box helicase ABU_RS07380 PF00271 Helicase conserved C-terminal domain ABU_RS07390 PF00145 C-5 cytosine-specific DNA methylase ABU_RS07390 PF01381 Helix-turn-helix ABU_RS07405 PF18381 YcaO cyclodehydratase C-terminal domain ABU_RS07405 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ABU_RS07420 PF02203 Tar ligand binding domain homologue ABU_RS07420 PF00672 HAMP domain ABU_RS07420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS07425 PF00075 RNase H ABU_RS07430 PF00682 HMGL-like ABU_RS07445 PF11799 impB/mucB/samB family C-terminal domain ABU_RS07445 PF11798 IMS family HHH motif ABU_RS07445 PF00817 impB/mucB/samB family ABU_RS07450 PF03454 MoeA C-terminal region (domain IV) ABU_RS07450 PF00994 Probable molybdopterin binding domain ABU_RS07450 PF03453 MoeA N-terminal region (domain I and II) ABU_RS07460 PF02634 FdhD/NarQ family ABU_RS07470 PF13247 4Fe-4S dicluster domain ABU_RS07475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS07475 PF00384 Molybdopterin oxidoreductase ABU_RS07475 PF01568 Molydopterin dinucleotide binding domain ABU_RS07480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS07480 PF00384 Molybdopterin oxidoreductase ABU_RS07480 PF01568 Molydopterin dinucleotide binding domain ABU_RS07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS07505 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS07530 PF01841 Transglutaminase-like superfamily ABU_RS07540 PF13247 4Fe-4S dicluster domain ABU_RS07545 PF00384 Molybdopterin oxidoreductase ABU_RS07545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS07545 PF01568 Molydopterin dinucleotide binding domain ABU_RS07555 PF02769 AIR synthase related protein, C-terminal domain ABU_RS07555 PF00586 AIR synthase related protein, N-terminal domain ABU_RS07610 PF03841 L-seryl-tRNA selenium transferase ABU_RS07615 PF09105 Elongation factor SelB, winged helix ABU_RS07615 PF00009 Elongation factor Tu GTP binding domain ABU_RS07615 PF09106 Elongation factor SelB, winged helix ABU_RS07615 PF03144 Elongation factor Tu domain 2 ABU_RS07615 PF09107 Elongation factor SelB, winged helix ABU_RS07670 PF08448 PAS fold ABU_RS07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS07670 PF08447 PAS fold ABU_RS07675 PF03358 NADPH-dependent FMN reductase ABU_RS07685 PF01966 HD domain ABU_RS07690 PF00563 EAL domain ABU_RS07690 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS07690 PF08448 PAS fold ABU_RS07695 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABU_RS07695 PF01243 Pyridoxamine 5'-phosphate oxidase ABU_RS07700 PF00563 EAL domain ABU_RS07700 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS07700 PF03707 Bacterial signalling protein N terminal repeat ABU_RS07705 PF00271 Helicase conserved C-terminal domain ABU_RS07705 PF00270 DEAD/DEAH box helicase ABU_RS07705 PF03880 DbpA RNA binding domain ABU_RS07725 PF00183 Hsp90 protein ABU_RS07730 PF00141 Peroxidase ABU_RS07750 PF04403 Paraquat-inducible protein A ABU_RS07765 PF00563 EAL domain ABU_RS07765 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS07765 PF08448 PAS fold ABU_RS07785 PF04073 Aminoacyl-tRNA editing domain ABU_RS07795 PF08713 DNA alkylation repair enzyme ABU_RS07810 PF01965 DJ-1/PfpI family ABU_RS07815 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus ABU_RS07815 PF05175 Methyltransferase small domain ABU_RS07820 PF07660 Secretin and TonB N terminus short domain ABU_RS07820 PF00593 TonB dependent receptor ABU_RS07820 PF07715 TonB-dependent Receptor Plug Domain ABU_RS07840 PF08281 Sigma-70, region 4 ABU_RS07840 PF04542 Sigma-70 region 2 ABU_RS07845 PF00491 Arginase family ABU_RS07850 PF00682 HMGL-like ABU_RS07850 PF08502 LeuA allosteric (dimerisation) domain ABU_RS07855 PF12833 Helix-turn-helix domain ABU_RS07860 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ABU_RS07875 PF00593 TonB dependent receptor ABU_RS07875 PF07715 TonB-dependent Receptor Plug Domain ABU_RS07880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABU_RS07880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABU_RS07885 PF00924 Mechanosensitive ion channel ABU_RS07890 PF02833 DHHA2 domain ABU_RS07890 PF01368 DHH family ABU_RS07905 PF10415 Fumarase C C-terminus ABU_RS07905 PF00206 Lyase ABU_RS07910 PF00072 Response regulator receiver domain ABU_RS07910 PF00486 Transcriptional regulatory protein, C terminal ABU_RS07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS07915 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS07920 PF01235 Sodium:alanine symporter family ABU_RS07925 PF01048 Phosphorylase superfamily ABU_RS07930 PF00698 Acyl transferase domain ABU_RS07935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABU_RS07950 PF04052 TolB amino-terminal domain ABU_RS07960 PF02472 Biopolymer transport protein ExbD/TolR ABU_RS07965 PF01618 MotA/TolQ/ExbB proton channel family ABU_RS07970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABU_RS07975 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABU_RS07975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU_RS07980 PF00231 ATP synthase ABU_RS07985 PF00306 ATP synthase alpha/beta chain, C terminal domain ABU_RS07985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU_RS07985 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABU_RS07990 PF00213 ATP synthase delta (OSCP) subunit ABU_RS07995 PF00430 ATP synthase B/B' CF(0) ABU_RS08005 PF17762 HTH domain found in ParB protein ABU_RS08005 PF02195 ParB-like nuclease domain ABU_RS08010 PF13614 AAA domain ABU_RS08030 PF00551 Formyl transferase ABU_RS08030 PF02911 Formyl transferase, C-terminal domain ABU_RS08035 PF00696 Amino acid kinase family ABU_RS08040 PF01926 50S ribosome-binding GTPase ABU_RS08040 PF01018 GTP1/OBG ABU_RS08045 PF01016 Ribosomal L27 protein ABU_RS08050 PF00829 Ribosomal prokaryotic L21 protein ABU_RS08055 PF16730 DnaG-primase C-terminal, helicase-binding domain ABU_RS08055 PF13662 Toprim domain ABU_RS08055 PF08275 DNA primase catalytic core, N-terminal domain ABU_RS08055 PF01807 CHC2 zinc finger ABU_RS08065 PF00035 Double-stranded RNA binding motif ABU_RS08065 PF14622 Ribonuclease-III-like ABU_RS08070 PF01264 Chorismate synthase ABU_RS08080 PF01435 Peptidase family M48 ABU_RS08090 PF00300 Histidine phosphatase superfamily (branch 1) ABU_RS08100 PF10396 GTP-binding protein TrmE N-terminus ABU_RS08100 PF12631 MnmE helical domain ABU_RS08100 PF01926 50S ribosome-binding GTPase ABU_RS08110 PF02096 60Kd inner membrane protein ABU_RS08110 PF14849 YidC periplasmic domain ABU_RS08115 PF01809 Putative membrane protein insertion efficiency factor ABU_RS08125 PF00468 Ribosomal protein L34 ABU_RS08130 PF10431 C-terminal, D2-small domain, of ClpB protein ABU_RS08130 PF17871 AAA lid domain ABU_RS08130 PF07724 AAA domain (Cdc48 subfamily) ABU_RS08130 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS08130 PF02861 Clp amino terminal domain, pathogenicity island component ABU_RS08135 PF01351 Ribonuclease HII ABU_RS08145 PF03976 Polyphosphate kinase 2 (PPK2) ABU_RS08155 PF01625 Peptide methionine sulfoxide reductase ABU_RS08160 PF01641 SelR domain ABU_RS08165 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABU_RS08180 PF04055 Radical SAM superfamily ABU_RS08180 PF06968 Biotin and Thiamin Synthesis associated domain ABU_RS08180 PF00202 Aminotransferase class-III ABU_RS08185 PF08448 PAS fold ABU_RS08185 PF08447 PAS fold ABU_RS08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS08190 PF02142 MGS-like domain ABU_RS08190 PF01808 AICARFT/IMPCHase bienzyme ABU_RS08195 PF00586 AIR synthase related protein, N-terminal domain ABU_RS08195 PF02769 AIR synthase related protein, C-terminal domain ABU_RS08195 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABU_RS08205 PF01476 LysM domain ABU_RS08205 PF08525 Opacity-associated protein A N-terminal motif ABU_RS08205 PF01551 Peptidase family M23 ABU_RS08210 PF01227 GTP cyclohydrolase I ABU_RS08215 PF01544 CorA-like Mg2+ transporter protein ABU_RS08220 PF00482 Type II secretion system (T2SS), protein F ABU_RS08225 PF00437 Type II/IV secretion system protein ABU_RS08250 PF02086 D12 class N6 adenine-specific DNA methyltransferase ABU_RS08485 PF01926 50S ribosome-binding GTPase ABU_RS08485 PF07650 KH domain ABU_RS08495 PF01078 Magnesium chelatase, subunit ChlI ABU_RS08495 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABU_RS08505 PF01327 Polypeptide deformylase ABU_RS08510 PF00574 Clp protease ABU_RS08515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABU_RS08515 PF05698 Bacterial trigger factor protein (TF) C-terminus ABU_RS08515 PF05697 Bacterial trigger factor protein (TF) ABU_RS08520 PF03976 Polyphosphate kinase 2 (PPK2) ABU_RS08525 PF03976 Polyphosphate kinase 2 (PPK2) ABU_RS08530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABU_RS08535 PF03435 Saccharopine dehydrogenase NADP binding domain ABU_RS08535 PF16653 Saccharopine dehydrogenase C-terminal domain ABU_RS08540 PF00589 Phage integrase family ABU_RS08540 PF02899 Phage integrase, N-terminal SAM-like domain ABU_RS08580 PF02463 RecF/RecN/SMC N terminal domain ABU_RS08580 PF06470 SMC proteins Flexible Hinge Domain ABU_RS08590 PF12161 HsdM N-terminal domain ABU_RS08590 PF02384 N-6 DNA Methylase ABU_RS08615 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU_RS08620 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU_RS08625 PF00072 Response regulator receiver domain ABU_RS08625 PF00486 Transcriptional regulatory protein, C terminal ABU_RS08630 PF02203 Tar ligand binding domain homologue ABU_RS08630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS08630 PF00672 HAMP domain ABU_RS08640 PF11849 Domain of unknown function (DUF3369) ABU_RS08645 PF00672 HAMP domain ABU_RS08645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS08645 PF02203 Tar ligand binding domain homologue ABU_RS08650 PF00672 HAMP domain ABU_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS08650 PF18698 Histidine kinase sensor domain ABU_RS08650 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS08670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU_RS08680 PF00486 Transcriptional regulatory protein, C terminal ABU_RS08680 PF00072 Response regulator receiver domain ABU_RS08690 PF03824 High-affinity nickel-transport protein ABU_RS08705 PF06965 Na+/H+ antiporter 1 ABU_RS08710 PF03150 Di-haem cytochrome c peroxidase ABU_RS08715 PF04116 Fatty acid hydroxylase superfamily ABU_RS08740 PF00137 ATP synthase subunit C ABU_RS08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS08745 PF02203 Tar ligand binding domain homologue ABU_RS08745 PF00672 HAMP domain ABU_RS08755 PF01594 AI-2E family transporter ABU_RS08780 PF08543 Phosphomethylpyrimidine kinase ABU_RS08785 PF00171 Aldehyde dehydrogenase family ABU_RS08800 PF12801 4Fe-4S binding domain ABU_RS08800 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABU_RS08800 PF13746 4Fe-4S dicluster domain ABU_RS08805 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS08810 PF12833 Helix-turn-helix domain ABU_RS08810 PF00072 Response regulator receiver domain ABU_RS08820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABU_RS08820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABU_RS08820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABU_RS08820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABU_RS08825 PF00795 Carbon-nitrogen hydrolase ABU_RS08845 PF00258 Flavodoxin ABU_RS08850 PF01475 Ferric uptake regulator family ABU_RS08860 PF04377 Arginine-tRNA-protein transferase, C terminus ABU_RS08860 PF04376 Arginine-tRNA-protein transferase, N terminus ABU_RS08865 PF00290 Tryptophan synthase alpha chain ABU_RS08870 PF00654 Voltage gated chloride channel ABU_RS08875 PF02548 Ketopantoate hydroxymethyltransferase ABU_RS08880 PF05491 RuvB C-terminal winged helix domain ABU_RS08880 PF17864 RuvB AAA lid domain ABU_RS08880 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABU_RS08885 PF01594 AI-2E family transporter ABU_RS08925 PF04055 Radical SAM superfamily ABU_RS08930 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABU_RS08940 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABU_RS08940 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABU_RS08945 PF00521 DNA gyrase/topoisomerase IV, subunit A ABU_RS08945 PF03989 DNA gyrase C-terminal domain, beta-propeller ABU_RS08955 PF01960 ArgJ family ABU_RS08965 PF00830 Ribosomal L28 family ABU_RS08980 PF01370 NAD dependent epimerase/dehydratase family ABU_RS08985 PF01467 Cytidylyltransferase-like ABU_RS08985 PF00294 pfkB family carbohydrate kinase ABU_RS08990 PF13580 SIS domain ABU_RS08995 PF00884 Sulfatase ABU_RS09000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABU_RS09010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABU_RS09020 PF00884 Sulfatase ABU_RS09035 PF03062 MBOAT, membrane-bound O-acyltransferase family ABU_RS09040 PF13439 Glycosyltransferase Family 4 ABU_RS09040 PF00534 Glycosyl transferases group 1 ABU_RS09045 PF00535 Glycosyl transferase family 2 ABU_RS09050 PF00534 Glycosyl transferases group 1 ABU_RS09050 PF13439 Glycosyltransferase Family 4 ABU_RS09055 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ABU_RS09055 PF00535 Glycosyl transferase family 2 ABU_RS09075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU_RS09080 PF16363 GDP-mannose 4,6 dehydratase ABU_RS09085 PF00483 Nucleotidyl transferase ABU_RS09095 PF01219 Prokaryotic diacylglycerol kinase ABU_RS09110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABU_RS09120 PF00037 4Fe-4S binding domain ABU_RS09130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS09130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABU_RS09135 PF01493 GXGXG motif ABU_RS09135 PF01645 Conserved region in glutamate synthase ABU_RS09135 PF04898 Glutamate synthase central domain ABU_RS09135 PF00310 Glutamine amidotransferases class-II ABU_RS09150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS09150 PF02203 Tar ligand binding domain homologue ABU_RS09150 PF00672 HAMP domain ABU_RS09155 PF02203 Tar ligand binding domain homologue ABU_RS09155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS09155 PF00672 HAMP domain ABU_RS09160 PF03958 Bacterial type II/III secretion system short domain ABU_RS09160 PF00263 Bacterial type II and III secretion system protein ABU_RS09165 PF09186 Domain of unknown function (DUF1949) ABU_RS09165 PF01205 Uncharacterized protein family UPF0029 ABU_RS09170 PF01479 S4 domain ABU_RS09170 PF01728 FtsJ-like methyltransferase ABU_RS09175 PF01687 Riboflavin kinase ABU_RS09175 PF06574 FAD synthetase ABU_RS09180 PF13649 Methyltransferase domain ABU_RS09185 PF00578 AhpC/TSA family ABU_RS09195 PF02913 FAD linked oxidases, C-terminal domain ABU_RS09195 PF01565 FAD binding domain ABU_RS09200 PF03631 Virulence factor BrkB ABU_RS09210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABU_RS09220 PF00793 DAHP synthetase I family ABU_RS09225 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABU_RS09230 PF01029 NusB family ABU_RS09235 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU_RS09250 PF00005 ABC transporter ABU_RS09260 PF04023 FeoA domain ABU_RS09265 PF07664 Ferrous iron transport protein B C terminus ABU_RS09265 PF04023 FeoA domain ABU_RS09265 PF17910 FeoB cytosolic helical domain ABU_RS09265 PF02421 Ferrous iron transport protein B ABU_RS09265 PF07670 Nucleoside recognition ABU_RS09290 PF00403 Heavy-metal-associated domain ABU_RS09295 PF01022 Bacterial regulatory protein, arsR family ABU_RS09300 PF00593 TonB dependent receptor ABU_RS09300 PF07715 TonB-dependent Receptor Plug Domain ABU_RS09310 PF00873 AcrB/AcrD/AcrF family ABU_RS09325 PF00313 'Cold-shock' DNA-binding domain ABU_RS09330 PF00072 Response regulator receiver domain ABU_RS09330 PF12833 Helix-turn-helix domain ABU_RS09335 PF00989 PAS fold ABU_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS09335 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS09355 PF01051 Initiator Replication protein ABU_RS09385 PF00578 AhpC/TSA family ABU_RS09385 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABU_RS09390 PF00085 Thioredoxin ABU_RS09405 PF04998 RNA polymerase Rpb1, domain 5 ABU_RS09405 PF04997 RNA polymerase Rpb1, domain 1 ABU_RS09405 PF00623 RNA polymerase Rpb1, domain 2 ABU_RS09405 PF05000 RNA polymerase Rpb1, domain 4 ABU_RS09405 PF04983 RNA polymerase Rpb1, domain 3 ABU_RS09410 PF04563 RNA polymerase beta subunit ABU_RS09410 PF04565 RNA polymerase Rpb2, domain 3 ABU_RS09410 PF10385 RNA polymerase beta subunit external 1 domain ABU_RS09410 PF04561 RNA polymerase Rpb2, domain 2 ABU_RS09410 PF04560 RNA polymerase Rpb2, domain 7 ABU_RS09410 PF00562 RNA polymerase Rpb2, domain 6 ABU_RS09415 PF16320 Ribosomal protein L7/L12 dimerisation domain ABU_RS09415 PF00542 Ribosomal protein L7/L12 C-terminal domain ABU_RS09420 PF00466 Ribosomal protein L10 ABU_RS09425 PF00687 Ribosomal protein L1p/L10e family ABU_RS09430 PF03946 Ribosomal protein L11, N-terminal domain ABU_RS09430 PF00298 Ribosomal protein L11, RNA binding domain ABU_RS09435 PF02357 Transcription termination factor nusG ABU_RS09450 PF00471 Ribosomal protein L33 ABU_RS09455 PF03143 Elongation factor Tu C-terminal domain ABU_RS09455 PF00009 Elongation factor Tu GTP binding domain ABU_RS09455 PF03144 Elongation factor Tu domain 2 ABU_RS09480 PF08245 Mur ligase middle domain ABU_RS09485 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABU_RS09485 PF00953 Glycosyl transferase family 4 ABU_RS09490 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABU_RS09490 PF01676 Metalloenzyme superfamily ABU_RS09495 PF00005 ABC transporter ABU_RS09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABU_RS09500 PF00912 Transglycosylase ABU_RS09500 PF00905 Penicillin binding protein transpeptidase domain ABU_RS09505 PF00120 Glutamine synthetase, catalytic domain ABU_RS09505 PF03951 Glutamine synthetase, beta-Grasp domain ABU_RS09515 PF02391 MoaE protein ABU_RS09525 PF02621 Menaquinone biosynthesis ABU_RS09530 PF02673 Bacitracin resistance protein BacA ABU_RS09535 PF03033 Glycosyltransferase family 28 N-terminal domain ABU_RS09535 PF04101 Glycosyltransferase family 28 C-terminal domain ABU_RS09540 PF01098 Cell cycle protein ABU_RS09545 PF00905 Penicillin binding protein transpeptidase domain ABU_RS09550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABU_RS09590 PF10431 C-terminal, D2-small domain, of ClpB protein ABU_RS09590 PF02861 Clp amino terminal domain, pathogenicity island component ABU_RS09590 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS09590 PF17871 AAA lid domain ABU_RS09590 PF07724 AAA domain (Cdc48 subfamily) ABU_RS09595 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABU_RS09610 PF13193 AMP-binding enzyme C-terminal domain ABU_RS09610 PF00501 AMP-binding enzyme ABU_RS09615 PF01575 MaoC like domain ABU_RS09635 PF02203 Tar ligand binding domain homologue ABU_RS09635 PF00672 HAMP domain ABU_RS09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS09640 PF02040 Arsenical pump membrane protein ABU_RS09660 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABU_RS09665 PF01613 Flavin reductase like domain ABU_RS09675 PF00771 FHIPEP family ABU_RS09680 PF00669 Bacterial flagellin N-terminal helical region ABU_RS09680 PF00700 Bacterial flagellin C-terminal helical region ABU_RS09685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABU_RS09685 PF18269 T3SS EscN ATPase C-terminal domain ABU_RS09695 PF01312 FlhB HrpN YscU SpaS Family ABU_RS09710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU_RS09710 PF00460 Flagella basal body rod protein ABU_RS09715 PF02049 Flagellar hook-basal body complex protein FliE ABU_RS09725 PF10609 NUBPL iron-transfer P-loop NTPase ABU_RS09730 PF00448 SRP54-type protein, GTPase domain ABU_RS09750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABU_RS09770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU_RS09770 PF00460 Flagella basal body rod protein ABU_RS09770 PF07196 Flagellin hook IN motif ABU_RS09770 PF07559 Flagellar basal body protein FlaE ABU_RS09775 PF00460 Flagella basal body rod protein ABU_RS09775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU_RS09785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABU_RS09795 PF01706 FliG C-terminal domain ABU_RS09795 PF14841 FliG middle domain ABU_RS09795 PF14842 FliG N-terminal domain ABU_RS09800 PF01514 Secretory protein of YscJ/FliF family ABU_RS09800 PF08345 Flagellar M-ring protein C-terminal ABU_RS09805 PF00460 Flagella basal body rod protein ABU_RS09810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU_RS09810 PF00460 Flagella basal body rod protein ABU_RS09820 PF00072 Response regulator receiver domain ABU_RS09825 PF00460 Flagella basal body rod protein ABU_RS09825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABU_RS09840 PF01782 RimM N-terminal domain ABU_RS09850 PF00886 Ribosomal protein S16 ABU_RS09855 PF00448 SRP54-type protein, GTPase domain ABU_RS09855 PF02881 SRP54-type protein, helical bundle domain ABU_RS09855 PF02978 Signal peptide binding domain ABU_RS09860 PF00849 RNA pseudouridylate synthase ABU_RS09865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABU_RS09865 PF00534 Glycosyl transferases group 1 ABU_RS09875 PF01784 NIF3 (NGG1p interacting factor 3) ABU_RS09880 PF02091 Glycyl-tRNA synthetase alpha subunit ABU_RS09890 PF00731 AIR carboxylase ABU_RS09900 PF01136 Peptidase family U32 ABU_RS09905 PF00672 HAMP domain ABU_RS09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS09905 PF17200 Single Cache domain 2 ABU_RS09910 PF13476 AAA domain ABU_RS09915 PF01513 ATP-NAD kinase ABU_RS09920 PF00679 Elongation factor G C-terminus ABU_RS09920 PF14492 Elongation Factor G, domain II ABU_RS09920 PF03764 Elongation factor G, domain IV ABU_RS09920 PF00009 Elongation factor Tu GTP binding domain ABU_RS09920 PF03144 Elongation factor Tu domain 2 ABU_RS09925 PF00177 Ribosomal protein S7p/S5e ABU_RS09930 PF00164 Ribosomal protein S12/S23 ABU_RS09940 PF07690 Major Facilitator Superfamily ABU_RS09945 PF00593 TonB dependent receptor ABU_RS09945 PF07715 TonB-dependent Receptor Plug Domain ABU_RS09960 PF00005 ABC transporter ABU_RS09965 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS10005 PF00117 Glutamine amidotransferase class-I ABU_RS10010 PF13416 Bacterial extracellular solute-binding protein ABU_RS10015 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS10020 PF08402 TOBE domain ABU_RS10020 PF00005 ABC transporter ABU_RS10030 PF07715 TonB-dependent Receptor Plug Domain ABU_RS10030 PF00593 TonB dependent receptor ABU_RS10050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABU_RS10050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABU_RS10070 PF16921 Tex protein YqgF-like domain ABU_RS10070 PF09371 Tex-like protein N-terminal domain ABU_RS10070 PF00575 S1 RNA binding domain ABU_RS10070 PF17674 HHH domain ABU_RS10080 PF01042 Endoribonuclease L-PSP ABU_RS10095 PF00155 Aminotransferase class I and II ABU_RS10105 PF09335 SNARE associated Golgi protein ABU_RS10110 PF01245 Ribosomal protein L19 ABU_RS10115 PF01746 tRNA (Guanine-1)-methyltransferase ABU_RS10125 PF08267 Cobalamin-independent synthase, N-terminal domain ABU_RS10125 PF01717 Cobalamin-independent synthase, Catalytic domain ABU_RS10130 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS10130 PF13291 ACT domain ABU_RS10135 PF00119 ATP synthase A chain ABU_RS10145 PF05538 Campylobacter major outer membrane protein ABU_RS10155 PF02660 Glycerol-3-phosphate acyltransferase ABU_RS10160 PF02445 Quinolinate synthetase A protein ABU_RS10165 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABU_RS10165 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABU_RS10180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABU_RS10190 PF00288 GHMP kinases N terminal domain ABU_RS10190 PF08544 GHMP kinases C terminal ABU_RS10200 PF04760 Translation initiation factor IF-2, N-terminal region ABU_RS10200 PF00009 Elongation factor Tu GTP binding domain ABU_RS10200 PF11987 Translation-initiation factor 2 ABU_RS10205 PF02033 Ribosome-binding factor A ABU_RS10210 PF02576 RimP N-terminal domain ABU_RS10215 PF01872 RibD C-terminal domain ABU_RS10215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABU_RS10220 PF09285 Elongation factor P, C-terminal ABU_RS10220 PF08207 Elongation factor P (EF-P) KOW-like domain ABU_RS10220 PF01132 Elongation factor P (EF-P) OB domain ABU_RS10225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABU_RS10225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABU_RS10225 PF01842 ACT domain ABU_RS10230 PF00575 S1 RNA binding domain ABU_RS10235 PF02401 LytB protein ABU_RS10240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABU_RS10245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABU_RS10245 PF01588 Putative tRNA binding domain ABU_RS10245 PF03484 tRNA synthetase B5 domain ABU_RS10245 PF03147 Ferredoxin-fold anticodon binding domain ABU_RS10250 PF01409 tRNA synthetases class II core domain (F) ABU_RS10250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABU_RS10255 PF01230 HIT domain ABU_RS10260 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABU_RS10265 PF02801 Beta-ketoacyl synthase, C-terminal domain ABU_RS10265 PF00109 Beta-ketoacyl synthase, N-terminal domain ABU_RS10270 PF00550 Phosphopantetheine attachment site ABU_RS10280 PF04055 Radical SAM superfamily ABU_RS10290 PF06508 Queuosine biosynthesis protein QueC ABU_RS10300 PF04452 RNA methyltransferase ABU_RS10310 PF00033 Cytochrome b/b6/petB ABU_RS10310 PF00032 Cytochrome b(C-terminal)/b6/petD ABU_RS10315 PF00355 Rieske [2Fe-2S] domain ABU_RS10320 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS10325 PF00696 Amino acid kinase family ABU_RS10330 PF13361 UvrD-like helicase C-terminal domain ABU_RS10330 PF00580 UvrD/REP helicase N-terminal domain ABU_RS10340 PF00472 RF-1 domain ABU_RS10340 PF03462 PCRF domain ABU_RS10345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABU_RS10370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABU_RS10370 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ABU_RS10385 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABU_RS10390 PF01668 SmpB protein ABU_RS10395 PF00288 GHMP kinases N terminal domain ABU_RS10400 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABU_RS10405 PF00580 UvrD/REP helicase N-terminal domain ABU_RS10405 PF13361 UvrD-like helicase C-terminal domain ABU_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABU_RS10410 PF03466 LysR substrate binding domain ABU_RS10415 PF16199 Radical_SAM C-terminal domain ABU_RS10415 PF04055 Radical SAM superfamily ABU_RS10420 PF13537 Glutamine amidotransferase domain ABU_RS10420 PF00156 Phosphoribosyl transferase domain ABU_RS10425 PF05173 Dihydrodipicolinate reductase, C-terminus ABU_RS10425 PF01113 Dihydrodipicolinate reductase, N-terminus ABU_RS10430 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS10435 PF00085 Thioredoxin ABU_RS10440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABU_RS10440 PF01411 tRNA synthetases class II (A) ABU_RS10440 PF02272 DHHA1 domain ABU_RS10470 PF00072 Response regulator receiver domain ABU_RS10470 PF00486 Transcriptional regulatory protein, C terminal ABU_RS10475 PF13180 PDZ domain ABU_RS10475 PF17820 PDZ domain ABU_RS10480 PF00920 Dehydratase family ABU_RS10540 PF09383 NIL domain ABU_RS10540 PF00005 ABC transporter ABU_RS10555 PF01142 tRNA pseudouridine synthase D (TruD) ABU_RS10560 PF15437 Plasminogen-binding protein pgbA C-terminal ABU_RS10570 PF13180 PDZ domain ABU_RS10570 PF03572 Peptidase family S41 ABU_RS10575 PF01259 SAICAR synthetase ABU_RS10580 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABU_RS10595 PF01553 Acyltransferase ABU_RS10600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABU_RS10605 PF02416 mttA/Hcf106 family ABU_RS10610 PF02416 mttA/Hcf106 family ABU_RS10615 PF03485 Arginyl tRNA synthetase N terminal domain ABU_RS10615 PF05746 DALR anticodon binding domain ABU_RS10615 PF00750 tRNA synthetases class I (R) ABU_RS10625 PF01467 Cytidylyltransferase-like ABU_RS10630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABU_RS10630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU_RS10635 PF00162 Phosphoglycerate kinase ABU_RS10640 PF00121 Triosephosphate isomerase ABU_RS10650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABU_RS10650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABU_RS10655 PF01842 ACT domain ABU_RS10655 PF01817 Chorismate mutase type II ABU_RS10655 PF00800 Prephenate dehydratase ABU_RS10660 PF00155 Aminotransferase class I and II ABU_RS10665 PF02780 Transketolase, C-terminal domain ABU_RS10665 PF02779 Transketolase, pyrimidine binding domain ABU_RS10665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABU_RS10670 PF00034 Cytochrome c ABU_RS10670 PF03150 Di-haem cytochrome c peroxidase ABU_RS10675 PF02545 Maf-like protein ABU_RS10690 PF00877 NlpC/P60 family ABU_RS10705 PF03167 Uracil DNA glycosylase superfamily ABU_RS10710 PF00171 Aldehyde dehydrogenase family ABU_RS10715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABU_RS10715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABU_RS10715 PF00205 Thiamine pyrophosphate enzyme, central domain ABU_RS10720 PF04011 LemA family ABU_RS10735 PF13419 Haloacid dehalogenase-like hydrolase ABU_RS10740 PF00210 Ferritin-like domain ABU_RS10755 PF07690 Major Facilitator Superfamily ABU_RS10765 PF00072 Response regulator receiver domain ABU_RS10765 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS10770 PF00529 HlyD membrane-fusion protein of T1SS ABU_RS10770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS10775 PF00873 AcrB/AcrD/AcrF family ABU_RS10780 PF02321 Outer membrane efflux protein ABU_RS10785 PF07715 TonB-dependent Receptor Plug Domain ABU_RS10785 PF00593 TonB dependent receptor ABU_RS10795 PF08281 Sigma-70, region 4 ABU_RS10795 PF04542 Sigma-70 region 2 ABU_RS10815 PF01053 Cys/Met metabolism PLP-dependent enzyme ABU_RS10820 PF02082 Transcriptional regulator ABU_RS10825 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS10835 PF01507 Phosphoadenosine phosphosulfate reductase family ABU_RS10840 PF01507 Phosphoadenosine phosphosulfate reductase family ABU_RS10845 PF00009 Elongation factor Tu GTP binding domain ABU_RS10850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABU_RS10850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABU_RS10860 PF02347 Glycine cleavage system P-protein ABU_RS10865 PF04650 YSIRK type signal peptide ABU_RS10865 PF17961 Bacterial Ig domain ABU_RS10865 PF00746 LPXTG cell wall anchor motif ABU_RS10865 PF17210 SdrD B-like domain ABU_RS10890 PF02277 Phosphoribosyltransferase ABU_RS10895 PF00939 Sodium:sulfate symporter transmembrane region ABU_RS10905 PF11412 Disulphide bond corrector protein DsbC ABU_RS10905 PF02683 Cytochrome C biogenesis protein transmembrane region ABU_RS10910 PF18030 RimK PreATP-grasp domain ABU_RS10910 PF08443 RimK-like ATP-grasp domain ABU_RS10925 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS10925 PF10442 FIST C domain ABU_RS10925 PF08495 FIST N domain ABU_RS10925 PF00563 EAL domain ABU_RS10930 PF02666 Phosphatidylserine decarboxylase ABU_RS10940 PF06725 3D domain ABU_RS10940 PF03562 MltA specific insert domain ABU_RS10945 PF00012 Hsp70 protein ABU_RS10950 PF01025 GrpE ABU_RS10955 PF01628 HrcA protein C terminal domain ABU_RS10965 PF01416 tRNA pseudouridine synthase ABU_RS10980 PF01255 Putative undecaprenyl diphosphate synthase ABU_RS10985 PF04127 DNA / pantothenate metabolism flavoprotein ABU_RS10985 PF02441 Flavoprotein ABU_RS10990 PF14602 Hexapeptide repeat of succinyl-transferase ABU_RS10990 PF12804 MobA-like NTP transferase domain ABU_RS11000 PF00271 Helicase conserved C-terminal domain ABU_RS11000 PF08148 DSHCT (NUC185) domain ABU_RS11000 PF00270 DEAD/DEAH box helicase ABU_RS11005 PF05958 tRNA (Uracil-5-)-methyltransferase ABU_RS11010 PF00293 NUDIX domain ABU_RS11025 PF01134 Glucose inhibited division protein A ABU_RS11025 PF13932 GidA associated domain ABU_RS11030 PF00677 Lumazine binding domain ABU_RS11045 PF06689 ClpX C4-type zinc finger ABU_RS11045 PF07724 AAA domain (Cdc48 subfamily) ABU_RS11045 PF10431 C-terminal, D2-small domain, of ClpB protein ABU_RS11050 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABU_RS11050 PF00132 Bacterial transferase hexapeptide (six repeats) ABU_RS11055 PF07977 FabA-like domain ABU_RS11060 PF02684 Lipid-A-disaccharide synthetase ABU_RS11065 PF02677 Epoxyqueuosine reductase QueH ABU_RS11075 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABU_RS11080 PF01261 Xylose isomerase-like TIM barrel ABU_RS11085 PF02321 Outer membrane efflux protein ABU_RS11090 PF00873 AcrB/AcrD/AcrF family ABU_RS11095 PF00529 HlyD membrane-fusion protein of T1SS ABU_RS11095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABU_RS11105 PF07690 Major Facilitator Superfamily ABU_RS11110 PF00916 Sulfate permease family ABU_RS11110 PF01740 STAS domain ABU_RS11130 PF17758 Proteasomal ATPase OB N-terminal domain ABU_RS11130 PF16450 Proteasomal ATPase OB C-terminal domain ABU_RS11130 PF00004 ATPase family associated with various cellular activities (AAA) ABU_RS11140 PF02621 Menaquinone biosynthesis ABU_RS11145 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABU_RS11150 PF01131 DNA topoisomerase ABU_RS11150 PF01751 Toprim domain ABU_RS11150 PF13368 Topoisomerase C-terminal repeat ABU_RS11160 PF06968 Biotin and Thiamin Synthesis associated domain ABU_RS11160 PF04055 Radical SAM superfamily ABU_RS11175 PF03952 Enolase, N-terminal domain ABU_RS11175 PF00113 Enolase, C-terminal TIM barrel domain ABU_RS11180 PF00154 recA bacterial DNA recombination protein ABU_RS11190 PF02719 Polysaccharide biosynthesis protein ABU_RS11195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABU_RS11200 PF02348 Cytidylyltransferase ABU_RS11205 PF08666 SAF domain ABU_RS11205 PF03102 NeuB family ABU_RS11225 PF02222 ATP-grasp domain ABU_RS11245 PF00700 Bacterial flagellin C-terminal helical region ABU_RS11245 PF07196 Flagellin hook IN motif ABU_RS11245 PF00669 Bacterial flagellin N-terminal helical region ABU_RS11250 PF00700 Bacterial flagellin C-terminal helical region ABU_RS11250 PF07196 Flagellin hook IN motif ABU_RS11250 PF00669 Bacterial flagellin N-terminal helical region ABU_RS11255 PF13746 4Fe-4S dicluster domain ABU_RS11255 PF12801 4Fe-4S binding domain ABU_RS11255 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABU_RS11260 PF00117 Glutamine amidotransferase class-I ABU_RS11260 PF06418 CTP synthase N-terminus ABU_RS11265 PF02272 DHHA1 domain ABU_RS11265 PF01368 DHH family ABU_RS11265 PF17768 RecJ OB domain ABU_RS11285 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABU_RS11285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABU_RS11285 PF02811 PHP domain ABU_RS11285 PF14579 Helix-hairpin-helix motif ABU_RS11290 PF01975 Survival protein SurE ABU_RS11305 PF01967 MoaC family ABU_RS11310 PF01165 Ribosomal protein S21 ABU_RS11340 PF01027 Inhibitor of apoptosis-promoting Bax1 ABU_RS11345 PF17792 ThiD2 family ABU_RS11345 PF02581 Thiamine monophosphate synthase ABU_RS11355 PF03840 Preprotein translocase SecG subunit ABU_RS11360 PF01765 Ribosome recycling factor ABU_RS11365 PF00156 Phosphoribosyl transferase domain ABU_RS11380 PF01544 CorA-like Mg2+ transporter protein ABU_RS11385 PF03883 Peroxide stress protein YaaA ABU_RS11400 PF00149 Calcineurin-like phosphoesterase ABU_RS11410 PF07715 TonB-dependent Receptor Plug Domain ABU_RS11410 PF00593 TonB dependent receptor ABU_RS11415 PF12833 Helix-turn-helix domain ABU_RS11420 PF00011 Hsp20/alpha crystallin family ABU_RS11425 PF01814 Hemerythrin HHE cation binding domain ABU_RS11430 PF17200 Single Cache domain 2 ABU_RS11430 PF00672 HAMP domain ABU_RS11430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABU_RS11435 PF00581 Rhodanese-like domain ABU_RS11435 PF00899 ThiF family ABU_RS11445 PF14403 Circularly permuted ATP-grasp type 2 ABU_RS11445 PF04168 A predicted alpha-helical domain with a conserved ER motif. ABU_RS11450 PF01841 Transglutaminase-like superfamily ABU_RS11450 PF08379 Bacterial transglutaminase-like N-terminal region ABU_RS11455 PF17850 CysA C-terminal regulatory domain ABU_RS11455 PF00005 ABC transporter ABU_RS11455 PF12857 TOBE-like domain ABU_RS11460 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component ABU_RS11470 PF00291 Pyridoxal-phosphate dependent enzyme ABU_RS11475 PF00563 EAL domain ABU_RS11475 PF08495 FIST N domain ABU_RS11475 PF10442 FIST C domain ABU_RS11475 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS11480 PF02597 ThiS family ABU_RS11510 PF14403 Circularly permuted ATP-grasp type 2 ABU_RS11515 PF00009 Elongation factor Tu GTP binding domain ABU_RS11515 PF03144 Elongation factor Tu domain 2 ABU_RS11515 PF00679 Elongation factor G C-terminus ABU_RS11520 PF04143 Sulphur transport ABU_RS11525 PF01206 Sulfurtransferase TusA ABU_RS11545 PF07660 Secretin and TonB N terminus short domain ABU_RS11545 PF00593 TonB dependent receptor ABU_RS11545 PF07715 TonB-dependent Receptor Plug Domain ABU_RS11560 PF08448 PAS fold ABU_RS11560 PF00990 Diguanylate cyclase, GGDEF domain ABU_RS11565 PF00884 Sulfatase ABU_RS11565 PF08019 Phosphoethanolamine transferase EptA/EptB ABU_RS11600 PF00486 Transcriptional regulatory protein, C terminal ABU_RS11600 PF00072 Response regulator receiver domain ABU_RS11605 PF00672 HAMP domain ABU_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABU_RS11605 PF00512 His Kinase A (phospho-acceptor) domain ABU_RS11610 PF08241 Methyltransferase domain ABU_RS11620 PF11849 Domain of unknown function (DUF3369) ABU_RS11625 PF02511 Thymidylate synthase complementing protein ABU_RS11630 PF04960 Glutaminase ABU_RS11635 PF03458 UPF0126 domain ABU_RS11645 PF00551 Formyl transferase ABU_RS11645 PF02911 Formyl transferase, C-terminal domain ABU_RS11650 PF02075 Crossover junction endodeoxyribonuclease RuvC ABU_RS11670 PF12833 Helix-turn-helix domain