ABU_RS00005 SM00382 ATPases associated with a variety of cellular activities ABU_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ABU_RS00010 SM00480 DNA polymerase III beta subunit ABU_RS00015 SM00387 Histidine kinase-like ATPases ABU_RS00015 SM00433 TopoisomeraseII ABU_RS00045 SM00382 ATPases associated with a variety of cellular activities ABU_RS00095 SM00998 Adenylosuccinate lyase C-terminus ABU_RS00135 SM00829 Enoylreductase ABU_RS00150 SM00845 GatB domain ABU_RS00170 SM00448 cheY-homologous receiver domain ABU_RS00170 SM00862 Transcriptional regulatory protein, C terminal ABU_RS00175 SM00091 PAS domain ABU_RS00175 SM00387 Histidine kinase-like ATPases ABU_RS00205 SM00878 Biotin carboxylase C-terminal domain ABU_RS00210 SM00487 DEAD-like helicases superfamily ABU_RS00210 SM00490 helicase superfamily c-terminal domain ABU_RS00245 SM00382 ATPases associated with a variety of cellular activities ABU_RS00250 SM00363 S4 RNA-binding domain ABU_RS00255 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS00260 SM00849 Metallo-beta-lactamase superfamily ABU_RS00265 SM00650 Ribosomal RNA adenine dimethylases ABU_RS00295 SM00360 RNA recognition motif ABU_RS00300 SM00448 cheY-homologous receiver domain ABU_RS00300 SM00862 Transcriptional regulatory protein, C terminal ABU_RS00305 SM00387 Histidine kinase-like ATPases ABU_RS00305 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS00330 SM00867 YceI-like domain ABU_RS00355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABU_RS00375 SM00450 Rhodanese Homology Domain ABU_RS00415 SM00937 ABU_RS00415 ABU_RS00430 SM00052 Putative diguanylate phosphodiesterase ABU_RS00430 SM00267 diguanylate cyclase ABU_RS00445 SM00382 ATPases associated with a variety of cellular activities ABU_RS00460 SM00448 cheY-homologous receiver domain ABU_RS00460 SM00862 Transcriptional regulatory protein, C terminal ABU_RS00465 SM00387 Histidine kinase-like ATPases ABU_RS00465 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS00510 SM00448 cheY-homologous receiver domain ABU_RS00510 SM00862 Transcriptional regulatory protein, C terminal ABU_RS00515 SM00387 Histidine kinase-like ATPases ABU_RS00515 SM01049 ABU_RS00515 ABU_RS00520 SM00947 Carbonic anhydrase ABU_RS00540 SM00382 ATPases associated with a variety of cellular activities ABU_RS00590 SM01018 B12 binding domain ABU_RS00600 SM00244 prohibitin homologues ABU_RS00640 SM00448 cheY-homologous receiver domain ABU_RS00655 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABU_RS00665 SM00788 Adenylosuccinate synthetase ABU_RS00680 SM00867 YceI-like domain ABU_RS00685 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU_RS00690 SM00867 YceI-like domain ABU_RS00705 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU_RS00740 SM00671 Sel1-like repeats. ABU_RS00780 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABU_RS00895 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS00895 SM00871 Bacterial transcription activator, effector binding domain ABU_RS00905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS00910 SM00487 DEAD-like helicases superfamily ABU_RS00910 SM00490 helicase superfamily c-terminal domain ABU_RS00915 SM00861 Transketolase, pyrimidine binding domain ABU_RS00945 SM00422 helix_turn_helix, mercury resistance ABU_RS00965 SM00563 Phosphate acyltransferases ABU_RS00970 SM00563 Phosphate acyltransferases ABU_RS00990 SM00248 ankyrin repeats ABU_RS00995 SM00938 Nitrogen regulatory protein P-II ABU_RS01075 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS01100 SM00732 Likely ribonuclease with RNase H fold. ABU_RS01195 SM00955 ABU_RS01195 ABU_RS01230 SM00840 ABU_RS01230 ABU_RS01235 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS01245 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS01270 SM00947 Carbonic anhydrase ABU_RS01325 SM00862 Transcriptional regulatory protein, C terminal ABU_RS01335 SM00782 PhnA Zinc-Ribbon ABU_RS01425 SM00382 ATPases associated with a variety of cellular activities ABU_RS01435 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABU_RS01440 SM00357 Cold shock protein domain ABU_RS01440 SM00382 ATPases associated with a variety of cellular activities ABU_RS01440 SM00959 Rho termination factor, N-terminal domain ABU_RS01455 SM00562 ABU_RS01455 ABU_RS01545 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABU_RS01555 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABU_RS01620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS01620 SM01049 ABU_RS01620 ABU_RS01670 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS01690 SM00382 ATPases associated with a variety of cellular activities ABU_RS01695 SM00382 ATPases associated with a variety of cellular activities ABU_RS01705 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS01750 SM00052 Putative diguanylate phosphodiesterase ABU_RS01750 SM00267 diguanylate cyclase ABU_RS01765 SM00320 WD40 repeats ABU_RS01790 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS01810 SM00387 Histidine kinase-like ATPases ABU_RS01810 SM01049 ABU_RS01810 ABU_RS01815 SM00448 cheY-homologous receiver domain ABU_RS01815 SM00862 Transcriptional regulatory protein, C terminal ABU_RS01835 SM00100 Cyclic nucleotide-monophosphate binding domain ABU_RS01835 SM00419 helix_turn_helix, cAMP Regulatory protein ABU_RS01845 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS01850 SM01387 ABU_RS01850 ABU_RS01865 SM00881 CoA binding domain ABU_RS01870 SM00387 Histidine kinase-like ATPases ABU_RS01870 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS01875 SM00448 cheY-homologous receiver domain ABU_RS01875 SM00862 Transcriptional regulatory protein, C terminal ABU_RS01970 SM01323 ABU_RS01970 ABU_RS02025 SM00487 DEAD-like helicases superfamily ABU_RS02025 SM00490 helicase superfamily c-terminal domain ABU_RS02030 SM00563 Phosphate acyltransferases ABU_RS02050 SM00487 DEAD-like helicases superfamily ABU_RS02050 SM00490 helicase superfamily c-terminal domain ABU_RS02050 SM00982 ABU_RS02050 ABU_RS02050 SM01058 CarD-like/TRCF domain ABU_RS02070 SM00448 cheY-homologous receiver domain ABU_RS02070 SM00862 Transcriptional regulatory protein, C terminal ABU_RS02085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS02090 SM00448 cheY-homologous receiver domain ABU_RS02095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS02095 SM00091 PAS domain ABU_RS02100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS02100 SM00091 PAS domain ABU_RS02100 SM00387 Histidine kinase-like ATPases ABU_RS02100 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS02130 SM00260 Two component signalling adaptor domain ABU_RS02155 SM00883 Chaperonin 10 Kd subunit ABU_RS02165 SM00387 Histidine kinase-like ATPases ABU_RS02165 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS02170 SM00448 cheY-homologous receiver domain ABU_RS02170 SM00862 Transcriptional regulatory protein, C terminal ABU_RS02185 SM00867 YceI-like domain ABU_RS02200 SM00382 ATPases associated with a variety of cellular activities ABU_RS02260 SM00382 ATPases associated with a variety of cellular activities ABU_RS02265 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS02265 SM00091 PAS domain ABU_RS02265 SM00448 cheY-homologous receiver domain ABU_RS02265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS02270 SM00448 cheY-homologous receiver domain ABU_RS02275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU_RS02275 SM00387 Histidine kinase-like ATPases ABU_RS02280 SM00917 LeuA allosteric (dimerisation) domain ABU_RS02290 SM01235 ABU_RS02290 ABU_RS02295 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABU_RS02295 SM00534 ATPase domain of DNA mismatch repair MUTS family ABU_RS02320 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS02345 SM00382 ATPases associated with a variety of cellular activities ABU_RS02360 SM00267 diguanylate cyclase ABU_RS02390 SM00838 Elongation factor G C-terminus ABU_RS02410 SM01400 ABU_RS02410 ABU_RS02485 SM00479 ABU_RS02485 ABU_RS02490 SM00100 Cyclic nucleotide-monophosphate binding domain ABU_RS02490 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS02515 SM00479 ABU_RS02515 ABU_RS02520 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS02535 SM00448 cheY-homologous receiver domain ABU_RS02535 SM00862 Transcriptional regulatory protein, C terminal ABU_RS02540 SM00387 Histidine kinase-like ATPases ABU_RS02540 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS02540 SM01049 ABU_RS02540 ABU_RS02635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS02635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU_RS02645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS02655 SM00155 Phospholipase D. Active site motifs. ABU_RS02675 SM00852 Probable molybdopterin binding domain ABU_RS02715 SM00382 ATPases associated with a variety of cellular activities ABU_RS02725 SM00072 Guanylate kinase homologues. ABU_RS02730 SM00052 Putative diguanylate phosphodiesterase ABU_RS02730 SM00267 diguanylate cyclase ABU_RS02730 SM00448 cheY-homologous receiver domain ABU_RS02750 SM00382 ATPases associated with a variety of cellular activities ABU_RS02765 SM00899 ABU_RS02765 ABU_RS02775 SM00382 ATPases associated with a variety of cellular activities ABU_RS02785 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS02795 SM00671 Sel1-like repeats. ABU_RS02895 SM00849 Metallo-beta-lactamase superfamily ABU_RS02905 SM00450 Rhodanese Homology Domain ABU_RS02965 SM00382 ATPases associated with a variety of cellular activities ABU_RS02965 SM00464 Found in ATP-dependent protease La (LON) ABU_RS02975 SM00226 Low molecular weight phosphatase family ABU_RS02985 SM00028 Tetratricopeptide repeats ABU_RS02990 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU_RS03000 SM00530 Helix-turn-helix XRE-family like proteins ABU_RS03010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS03015 SM00091 PAS domain ABU_RS03015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03030 SM00878 Biotin carboxylase C-terminal domain ABU_RS03055 SM00382 ATPases associated with a variety of cellular activities ABU_RS03075 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS03080 SM00267 diguanylate cyclase ABU_RS03090 SM00260 Two component signalling adaptor domain ABU_RS03090 SM00448 cheY-homologous receiver domain ABU_RS03110 SM00487 DEAD-like helicases superfamily ABU_RS03110 SM00490 helicase superfamily c-terminal domain ABU_RS03115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03120 SM00478 endonuclease III ABU_RS03140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03155 SM00448 cheY-homologous receiver domain ABU_RS03155 SM00862 Transcriptional regulatory protein, C terminal ABU_RS03160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS03160 SM00091 PAS domain ABU_RS03160 SM00387 Histidine kinase-like ATPases ABU_RS03165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03165 SM01358 ABU_RS03165 ABU_RS03170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03215 SM00646 ABU_RS03215 ABU_RS03225 SM00363 S4 RNA-binding domain ABU_RS03230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS03230 SM00954 Region found in RelA / SpoT proteins ABU_RS03235 SM01409 ABU_RS03235 ABU_RS03290 SM00267 diguanylate cyclase ABU_RS03295 SM00382 ATPases associated with a variety of cellular activities ABU_RS03300 SM00984 UDP binding domain ABU_RS03310 SM00984 UDP binding domain ABU_RS03380 SM00382 ATPases associated with a variety of cellular activities ABU_RS03540 SM00382 ATPases associated with a variety of cellular activities ABU_RS03550 SM00248 ankyrin repeats ABU_RS03615 SM00448 cheY-homologous receiver domain ABU_RS03615 SM00862 Transcriptional regulatory protein, C terminal ABU_RS03625 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABU_RS03700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS03700 SM00267 diguanylate cyclase ABU_RS03720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU_RS03760 SM01403 ABU_RS03760 ABU_RS03780 SM01382 ABU_RS03780 ABU_RS03780 SM01383 ABU_RS03780 ABU_RS03795 SM00322 K homology RNA-binding domain ABU_RS03815 SM01374 ABU_RS03815 ABU_RS03820 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABU_RS03870 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS03875 SM00986 Uracil DNA glycosylase superfamily ABU_RS03875 SM00987 UreE urease accessory protein, C-terminal domain ABU_RS03890 SM00260 Two component signalling adaptor domain ABU_RS03895 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS03910 SM00852 Probable molybdopterin binding domain ABU_RS03915 SM01059 Chloramphenicol acetyltransferase ABU_RS03920 SM00829 Enoylreductase ABU_RS03930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03935 SM01005 Alanine racemase, C-terminal domain ABU_RS03940 SM00465 GIY-YIG type nucleases (URI domain) ABU_RS03945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS03965 SM00448 cheY-homologous receiver domain ABU_RS03965 SM00862 Transcriptional regulatory protein, C terminal ABU_RS03970 SM00387 Histidine kinase-like ATPases ABU_RS03970 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS03970 SM00448 cheY-homologous receiver domain ABU_RS03975 SM00387 Histidine kinase-like ATPases ABU_RS03975 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS03975 SM00448 cheY-homologous receiver domain ABU_RS04020 SM00382 ATPases associated with a variety of cellular activities ABU_RS04045 SM00988 UreE urease accessory protein, N-terminal domain ABU_RS04090 SM00347 helix_turn_helix multiple antibiotic resistance protein ABU_RS04105 SM00267 diguanylate cyclase ABU_RS04145 SM00220 Serine/Threonine protein kinases, catalytic domain ABU_RS04155 SM00052 Putative diguanylate phosphodiesterase ABU_RS04160 SM00448 cheY-homologous receiver domain ABU_RS04160 SM00850 LytTr DNA-binding domain ABU_RS04235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS04295 SM00479 ABU_RS04295 ABU_RS04360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU_RS04375 SM01130 ABU_RS04375 ABU_RS04390 SM00382 ATPases associated with a variety of cellular activities ABU_RS04425 SM00382 ATPases associated with a variety of cellular activities ABU_RS04440 SM00052 Putative diguanylate phosphodiesterase ABU_RS04440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS04440 SM00091 PAS domain ABU_RS04440 SM00267 diguanylate cyclase ABU_RS04450 SM00382 ATPases associated with a variety of cellular activities ABU_RS04450 SM00962 SRP54-type protein, GTPase domain ABU_RS04465 SM00322 K homology RNA-binding domain ABU_RS04465 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS04525 SM00448 cheY-homologous receiver domain ABU_RS04525 SM00862 Transcriptional regulatory protein, C terminal ABU_RS04530 SM00387 Histidine kinase-like ATPases ABU_RS04540 SM00267 diguanylate cyclase ABU_RS04550 SM00382 ATPases associated with a variety of cellular activities ABU_RS04645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABU_RS04645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS04645 SM00849 Metallo-beta-lactamase superfamily ABU_RS04650 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ABU_RS04650 SM01080 ABU_RS04650 ABU_RS04655 SM00028 Tetratricopeptide repeats ABU_RS04700 SM00382 ATPases associated with a variety of cellular activities ABU_RS04710 SM00912 haemagglutination activity domain ABU_RS04855 SM00857 Resolvase, N terminal domain ABU_RS04870 SM00382 ATPases associated with a variety of cellular activities ABU_RS04870 SM01086 C-terminal, D2-small domain, of ClpB protein ABU_RS04885 SM00257 Lysin motif ABU_RS04935 SM00965 Secretin and TonB N terminus short domain ABU_RS04940 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABU_RS04945 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABU_RS04980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS04980 SM00091 PAS domain ABU_RS04980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS05010 SM00382 ATPases associated with a variety of cellular activities ABU_RS05020 SM00060 Fibronectin type 3 domain ABU_RS05025 SM00363 S4 RNA-binding domain ABU_RS05075 SM01329 ABU_RS05075 ABU_RS05105 SM00363 S4 RNA-binding domain ABU_RS05105 SM01390 ABU_RS05105 ABU_RS05110 SM00662 RNA polymerases D ABU_RS05125 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS05125 SM01240 ABU_RS05125 ABU_RS05140 SM00062 Bacterial periplasmic substrate-binding proteins ABU_RS05145 SM00448 cheY-homologous receiver domain ABU_RS05145 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05160 SM00112 Cadherin repeats. ABU_RS05160 SM00736 Dystroglycan-type cadherin-like domains. ABU_RS05175 SM00271 DnaJ molecular chaperone homology domain ABU_RS05180 SM00271 DnaJ molecular chaperone homology domain ABU_RS05190 SM00387 Histidine kinase-like ATPases ABU_RS05195 SM00448 cheY-homologous receiver domain ABU_RS05195 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05205 SM00382 ATPases associated with a variety of cellular activities ABU_RS05220 SM00829 Enoylreductase ABU_RS05265 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS05330 SM00382 ATPases associated with a variety of cellular activities ABU_RS05340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS05345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU_RS05345 SM00292 breast cancer carboxy-terminal domain ABU_RS05345 SM00532 Ligase N family ABU_RS05360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS05390 SM00919 Malic enzyme, NAD binding domain ABU_RS05390 SM01274 ABU_RS05390 ABU_RS05425 SM00448 cheY-homologous receiver domain ABU_RS05425 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05430 SM00387 Histidine kinase-like ATPases ABU_RS05435 SM00244 prohibitin homologues ABU_RS05475 SM00671 Sel1-like repeats. ABU_RS05525 SM00382 ATPases associated with a variety of cellular activities ABU_RS05540 SM00382 ATPases associated with a variety of cellular activities ABU_RS05550 SM00448 cheY-homologous receiver domain ABU_RS05550 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05555 SM00387 Histidine kinase-like ATPases ABU_RS05555 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS05575 SM00479 ABU_RS05575 ABU_RS05580 SM00267 diguanylate cyclase ABU_RS05585 SM00530 Helix-turn-helix XRE-family like proteins ABU_RS05590 SM00490 helicase superfamily c-terminal domain ABU_RS05595 SM00091 PAS domain ABU_RS05595 SM00387 Histidine kinase-like ATPases ABU_RS05600 SM00448 cheY-homologous receiver domain ABU_RS05600 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05610 SM00382 ATPases associated with a variety of cellular activities ABU_RS05620 SM00421 helix_turn_helix, Lux Regulon ABU_RS05630 SM00052 Putative diguanylate phosphodiesterase ABU_RS05630 SM00267 diguanylate cyclase ABU_RS05645 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS05650 SM00382 ATPases associated with a variety of cellular activities ABU_RS05660 SM00852 Probable molybdopterin binding domain ABU_RS05695 SM00530 Helix-turn-helix XRE-family like proteins ABU_RS05710 SM00382 ATPases associated with a variety of cellular activities ABU_RS05715 SM00871 Bacterial transcription activator, effector binding domain ABU_RS05740 SM00463 Small MutS-related domain ABU_RS05740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABU_RS05740 SM00534 ATPase domain of DNA mismatch repair MUTS family ABU_RS05745 SM00116 Domain in cystathionine beta-synthase and other proteins. ABU_RS05745 SM01091 Transporter associated domain ABU_RS05770 SM00938 Nitrogen regulatory protein P-II ABU_RS05805 SM00843 ABU_RS05805 ABU_RS05810 SM00448 cheY-homologous receiver domain ABU_RS05810 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05815 SM00387 Histidine kinase-like ATPases ABU_RS05825 SM00387 Histidine kinase-like ATPases ABU_RS05830 SM00448 cheY-homologous receiver domain ABU_RS05830 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05840 SM00448 cheY-homologous receiver domain ABU_RS05840 SM00862 Transcriptional regulatory protein, C terminal ABU_RS05895 SM01209 ABU_RS05895 ABU_RS05895 SM01210 ABU_RS05895 ABU_RS05915 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS05915 SM00322 K homology RNA-binding domain ABU_RS05920 SM00448 cheY-homologous receiver domain ABU_RS05925 SM00073 Histidine Phosphotransfer domain ABU_RS05925 SM00260 Two component signalling adaptor domain ABU_RS05925 SM00387 Histidine kinase-like ATPases ABU_RS05925 SM01231 ABU_RS05925 ABU_RS05930 SM00138 Methyltransferase, chemotaxis proteins ABU_RS05940 SM00448 cheY-homologous receiver domain ABU_RS05985 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS06180 SM01004 Delta-aminolevulinic acid dehydratase ABU_RS06185 SM00091 PAS domain ABU_RS06185 SM00387 Histidine kinase-like ATPases ABU_RS06190 SM00448 cheY-homologous receiver domain ABU_RS06190 SM00862 Transcriptional regulatory protein, C terminal ABU_RS06210 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS06250 SM00271 DnaJ molecular chaperone homology domain ABU_RS06275 SM00479 ABU_RS06275 ABU_RS06330 SM00448 cheY-homologous receiver domain ABU_RS06330 SM00862 Transcriptional regulatory protein, C terminal ABU_RS06335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABU_RS06335 SM00474 3'-5' exonuclease ABU_RS06335 SM00475 5'-3' exonuclease ABU_RS06335 SM00482 DNA polymerase A domain ABU_RS06350 SM00052 Putative diguanylate phosphodiesterase ABU_RS06350 SM00267 diguanylate cyclase ABU_RS06355 SM00382 ATPases associated with a variety of cellular activities ABU_RS06375 SM00363 S4 RNA-binding domain ABU_RS06435 SM00448 cheY-homologous receiver domain ABU_RS06435 SM00862 Transcriptional regulatory protein, C terminal ABU_RS06440 SM00387 Histidine kinase-like ATPases ABU_RS06440 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS06460 SM00271 DnaJ molecular chaperone homology domain ABU_RS06485 SM00849 Metallo-beta-lactamase superfamily ABU_RS06490 SM00267 diguanylate cyclase ABU_RS06495 SM00267 diguanylate cyclase ABU_RS06525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS06525 SM01049 ABU_RS06525 ABU_RS06535 SM00957 SecA DEAD-like domain ABU_RS06535 SM00958 SecA preprotein cross-linking domain ABU_RS06590 SM01007 Class II Aldolase and Adducin N-terminal domain ABU_RS06595 SM00411 bacterial (prokaryotic) histone like domain ABU_RS06640 SM00487 DEAD-like helicases superfamily ABU_RS06640 SM00490 helicase superfamily c-terminal domain ABU_RS06775 SM00448 cheY-homologous receiver domain ABU_RS06785 SM00091 PAS domain ABU_RS06785 SM00387 Histidine kinase-like ATPases ABU_RS06790 SM00271 DnaJ molecular chaperone homology domain ABU_RS06795 SM00422 helix_turn_helix, mercury resistance ABU_RS06805 SM00382 ATPases associated with a variety of cellular activities ABU_RS06845 SM00851 MGS-like domain ABU_RS06845 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABU_RS06880 SM00864 Tubulin/FtsZ family, GTPase domain ABU_RS06880 SM00865 Tubulin/FtsZ family, C-terminal domain ABU_RS06885 SM00842 Cell division protein FtsA ABU_RS06935 SM00382 ATPases associated with a variety of cellular activities ABU_RS06960 SM00487 DEAD-like helicases superfamily ABU_RS06960 SM00490 helicase superfamily c-terminal domain ABU_RS07035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS07080 SM00981 ABU_RS07080 ABU_RS07190 SM00267 diguanylate cyclase ABU_RS07255 SM00965 Secretin and TonB N terminus short domain ABU_RS07260 SM00267 diguanylate cyclase ABU_RS07290 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS07295 SM00478 endonuclease III ABU_RS07335 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS07365 SM00965 Secretin and TonB N terminus short domain ABU_RS07380 SM00487 DEAD-like helicases superfamily ABU_RS07380 SM00490 helicase superfamily c-terminal domain ABU_RS07385 SM00382 ATPases associated with a variety of cellular activities ABU_RS07400 SM00530 Helix-turn-helix XRE-family like proteins ABU_RS07420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS07450 SM00852 Probable molybdopterin binding domain ABU_RS07480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS07505 SM00387 Histidine kinase-like ATPases ABU_RS07510 SM00448 cheY-homologous receiver domain ABU_RS07530 SM00460 Transglutaminase/protease-like homologues ABU_RS07545 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABU_RS07600 SM00671 Sel1-like repeats. ABU_RS07670 SM00387 Histidine kinase-like ATPases ABU_RS07670 SM01049 ABU_RS07670 ABU_RS07680 SM00670 Large family of predicted nucleotide-binding domains ABU_RS07690 SM00052 Putative diguanylate phosphodiesterase ABU_RS07690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS07690 SM00267 diguanylate cyclase ABU_RS07700 SM00091 PAS domain ABU_RS07700 SM00267 diguanylate cyclase ABU_RS07705 SM00487 DEAD-like helicases superfamily ABU_RS07705 SM00490 helicase superfamily c-terminal domain ABU_RS07725 SM00387 Histidine kinase-like ATPases ABU_RS07740 SM00248 ankyrin repeats ABU_RS07765 SM00052 Putative diguanylate phosphodiesterase ABU_RS07765 SM00267 diguanylate cyclase ABU_RS07820 SM00965 Secretin and TonB N terminus short domain ABU_RS07855 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS07865 SM00966 SpoVT / AbrB like domain ABU_RS07890 SM01131 ABU_RS07890 ABU_RS07910 SM00448 cheY-homologous receiver domain ABU_RS07910 SM00862 Transcriptional regulatory protein, C terminal ABU_RS07915 SM00387 Histidine kinase-like ATPases ABU_RS07930 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABU_RS07975 SM00382 ATPases associated with a variety of cellular activities ABU_RS08005 SM00470 ParB-like nuclease domain ABU_RS08055 SM00400 zinc finger ABU_RS08055 SM00493 ABU_RS08055 ABU_RS08065 SM00358 Double-stranded RNA binding motif ABU_RS08065 SM00535 Ribonuclease III family ABU_RS08090 SM00855 Phosphoglycerate mutase family ABU_RS08105 SM01245 ABU_RS08105 ABU_RS08115 SM01234 ABU_RS08115 ABU_RS08130 SM00382 ATPases associated with a variety of cellular activities ABU_RS08130 SM01086 C-terminal, D2-small domain, of ClpB protein ABU_RS08185 SM00062 Bacterial periplasmic substrate-binding proteins ABU_RS08185 SM00387 Histidine kinase-like ATPases ABU_RS08190 SM00798 AICARFT/IMPCHase bienzyme ABU_RS08190 SM00851 MGS-like domain ABU_RS08225 SM00382 ATPases associated with a variety of cellular activities ABU_RS08625 SM00448 cheY-homologous receiver domain ABU_RS08625 SM00862 Transcriptional regulatory protein, C terminal ABU_RS08630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS08640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS08640 SM00091 PAS domain ABU_RS08640 SM00448 cheY-homologous receiver domain ABU_RS08640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS08645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS08645 SM01358 ABU_RS08645 ABU_RS08650 SM00062 Bacterial periplasmic substrate-binding proteins ABU_RS08650 SM00091 PAS domain ABU_RS08650 SM00387 Histidine kinase-like ATPases ABU_RS08680 SM00862 Transcriptional regulatory protein, C terminal ABU_RS08745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS08805 SM00387 Histidine kinase-like ATPases ABU_RS08810 SM00448 cheY-homologous receiver domain ABU_RS08810 SM00862 Transcriptional regulatory protein, C terminal ABU_RS08880 SM00382 ATPases associated with a variety of cellular activities ABU_RS08890 SM00450 Rhodanese Homology Domain ABU_RS08940 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABU_RS08945 SM00434 DNA Topoisomerase IV ABU_RS09150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS09155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS09175 SM00904 Riboflavin kinase ABU_RS09235 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABU_RS09250 SM00382 ATPases associated with a variety of cellular activities ABU_RS09260 SM00899 ABU_RS09260 ABU_RS09295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU_RS09325 SM00357 Cold shock protein domain ABU_RS09330 SM00448 cheY-homologous receiver domain ABU_RS09330 SM00862 Transcriptional regulatory protein, C terminal ABU_RS09335 SM00387 Histidine kinase-like ATPases ABU_RS09405 SM00663 RNA polymerase I subunit A N-terminus ABU_RS09430 SM00649 Ribosomal protein L11/L12 ABU_RS09435 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABU_RS09495 SM00382 ATPases associated with a variety of cellular activities ABU_RS09505 SM01230 ABU_RS09505 ABU_RS09590 SM00382 ATPases associated with a variety of cellular activities ABU_RS09590 SM01086 C-terminal, D2-small domain, of ClpB protein ABU_RS09635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS09645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABU_RS09660 SM00226 Low molecular weight phosphatase family ABU_RS09685 SM00382 ATPases associated with a variety of cellular activities ABU_RS09730 SM00382 ATPases associated with a variety of cellular activities ABU_RS09730 SM00962 SRP54-type protein, GTPase domain ABU_RS09760 SM00028 Tetratricopeptide repeats ABU_RS09820 SM00448 cheY-homologous receiver domain ABU_RS09855 SM00382 ATPases associated with a variety of cellular activities ABU_RS09855 SM00962 SRP54-type protein, GTPase domain ABU_RS09855 SM00963 SRP54-type protein, helical bundle domain ABU_RS09890 SM01001 AIR carboxylase ABU_RS09905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS09905 SM01049 ABU_RS09905 ABU_RS09920 SM00838 Elongation factor G C-terminus ABU_RS09920 SM00889 Elongation factor G, domain IV ABU_RS09960 SM00382 ATPases associated with a variety of cellular activities ABU_RS10020 SM00382 ATPases associated with a variety of cellular activities ABU_RS10025 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS10070 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS10070 SM00732 Likely ribonuclease with RNase H fold. ABU_RS10090 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS10090 SM00871 Bacterial transcription activator, effector binding domain ABU_RS10150 SM00905 Dihydroneopterin aldolase ABU_RS10155 SM01207 ABU_RS10155 ABU_RS10220 SM00841 Elongation factor P, C-terminal ABU_RS10220 SM01185 ABU_RS10220 ABU_RS10230 SM00316 Ribosomal protein S1-like RNA-binding domain ABU_RS10245 SM00874 tRNA synthetase B5 domain ABU_RS10245 SM00896 Ferredoxin-fold anticodon binding domain ABU_RS10265 SM00825 Beta-ketoacyl synthase ABU_RS10275 SM00822 ABU_RS10275 ABU_RS10340 SM00937 ABU_RS10340 ABU_RS10415 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS10440 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABU_RS10465 SM00387 Histidine kinase-like ATPases ABU_RS10465 SM00388 His Kinase A (phosphoacceptor) domain ABU_RS10470 SM00448 cheY-homologous receiver domain ABU_RS10470 SM00862 Transcriptional regulatory protein, C terminal ABU_RS10475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU_RS10540 SM00382 ATPases associated with a variety of cellular activities ABU_RS10570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABU_RS10570 SM00245 tail specific protease ABU_RS10585 SM01211 ABU_RS10585 ABU_RS10595 SM00563 Phosphate acyltransferases ABU_RS10615 SM00836 DALR anticodon binding domain ABU_RS10615 SM01016 Arginyl tRNA synthetase N terminal dom ABU_RS10630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABU_RS10655 SM00830 Chorismate mutase type II ABU_RS10665 SM00861 Transketolase, pyrimidine binding domain ABU_RS10695 SM00100 Cyclic nucleotide-monophosphate binding domain ABU_RS10695 SM00419 helix_turn_helix, cAMP Regulatory protein ABU_RS10705 SM00986 Uracil DNA glycosylase superfamily ABU_RS10705 SM00987 UreE urease accessory protein, C-terminal domain ABU_RS10765 SM00267 diguanylate cyclase ABU_RS10785 SM00965 Secretin and TonB N terminus short domain ABU_RS10865 SM00327 von Willebrand factor (vWF) type A domain ABU_RS10925 SM00052 Putative diguanylate phosphodiesterase ABU_RS10925 SM00267 diguanylate cyclase ABU_RS10940 SM00925 MltA specific insert domain ABU_RS10995 SM00248 ankyrin repeats ABU_RS11000 SM00487 DEAD-like helicases superfamily ABU_RS11000 SM00490 helicase superfamily c-terminal domain ABU_RS11025 SM01228 ABU_RS11025 ABU_RS11045 SM00382 ATPases associated with a variety of cellular activities ABU_RS11045 SM00994 ClpX C4-type zinc finger ABU_RS11045 SM01086 C-terminal, D2-small domain, of ClpB protein ABU_RS11080 SM00518 AP endonuclease family 2 ABU_RS11115 SM00671 Sel1-like repeats. ABU_RS11120 SM00671 Sel1-like repeats. ABU_RS11130 SM00382 ATPases associated with a variety of cellular activities ABU_RS11150 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABU_RS11150 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABU_RS11150 SM00493 ABU_RS11150 ABU_RS11160 SM00729 Elongator protein 3, MiaB family, Radical SAM ABU_RS11160 SM00876 Biotin and Thiamin Synthesis associated domain ABU_RS11175 SM01192 ABU_RS11175 ABU_RS11175 SM01193 ABU_RS11175 ABU_RS11180 SM00382 ATPases associated with a variety of cellular activities ABU_RS11285 SM00481 DNA polymerase alpha chain like domain ABU_RS11390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABU_RS11415 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS11430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABU_RS11435 SM00450 Rhodanese Homology Domain ABU_RS11440 SM00460 Transglutaminase/protease-like homologues ABU_RS11450 SM00460 Transglutaminase/protease-like homologues ABU_RS11455 SM00382 ATPases associated with a variety of cellular activities ABU_RS11475 SM00052 Putative diguanylate phosphodiesterase ABU_RS11545 SM00965 Secretin and TonB N terminus short domain ABU_RS11560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABU_RS11560 SM00091 PAS domain ABU_RS11560 SM00267 diguanylate cyclase ABU_RS11600 SM00448 cheY-homologous receiver domain ABU_RS11600 SM00862 Transcriptional regulatory protein, C terminal ABU_RS11605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABU_RS11615 SM00342 helix_turn_helix, arabinose operon control protein ABU_RS11620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABU_RS11670 SM00342 helix_turn_helix, arabinose operon control protein