locus-tag class description ACIB15232_RS00005 PF00308 Bacterial dnaA protein ACIB15232_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ACIB15232_RS00005 PF11638 DnaA N-terminal domain ACIB15232_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACIB15232_RS00010 PF02767 DNA polymerase III beta subunit, central domain ACIB15232_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACIB15232_RS00015 PF01751 Toprim domain ACIB15232_RS00015 PF00204 DNA gyrase B ACIB15232_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ACIB15232_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS00020 PF14489 QueF-like protein ACIB15232_RS00035 PF13649 Methyltransferase domain ACIB15232_RS00040 PF00005 ABC transporter ACIB15232_RS00040 PF08402 TOBE domain ACIB15232_RS00045 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS00055 PF03459 TOBE domain ACIB15232_RS00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACIB15232_RS00060 PF13194 Domain of unknown function (DUF4010) ACIB15232_RS00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACIB15232_RS00065 PF03466 LysR substrate binding domain ACIB15232_RS00080 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS00085 PF01507 Phosphoadenosine phosphosulfate reductase family ACIB15232_RS00090 PF01507 Phosphoadenosine phosphosulfate reductase family ACIB15232_RS00100 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS00105 PF02082 Transcriptional regulator ACIB15232_RS00110 PF01053 Cys/Met metabolism PLP-dependent enzyme ACIB15232_RS00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS00125 PF02203 Tar ligand binding domain homologue ACIB15232_RS00125 PF00672 HAMP domain ACIB15232_RS00140 PF02321 Outer membrane efflux protein ACIB15232_RS00145 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS00150 PF00529 HlyD membrane-fusion protein of T1SS ACIB15232_RS00150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACIB15232_RS00155 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS00155 PF17158 Membrane-associated sensor, integral membrane domain ACIB15232_RS00165 PF07690 Major Facilitator Superfamily ACIB15232_RS00170 PF00210 Ferritin-like domain ACIB15232_RS00175 PF13419 Haloacid dehalogenase-like hydrolase ACIB15232_RS00180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACIB15232_RS00180 PF00205 Thiamine pyrophosphate enzyme, central domain ACIB15232_RS00180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACIB15232_RS00185 PF00171 Aldehyde dehydrogenase family ACIB15232_RS00190 PF03167 Uracil DNA glycosylase superfamily ACIB15232_RS00210 PF02810 SEC-C motif ACIB15232_RS00215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACIB15232_RS00215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACIB15232_RS00220 PF03883 Peroxide stress protein YaaA ACIB15232_RS00225 PF01544 CorA-like Mg2+ transporter protein ACIB15232_RS00240 PF00156 Phosphoribosyl transferase domain ACIB15232_RS00245 PF01765 Ribosome recycling factor ACIB15232_RS00255 PF03840 Preprotein translocase SecG subunit ACIB15232_RS00265 PF17792 ThiD2 family ACIB15232_RS00265 PF02581 Thiamine monophosphate synthase ACIB15232_RS00270 PF01027 Inhibitor of apoptosis-promoting Bax1 ACIB15232_RS00300 PF07196 Flagellin hook IN motif ACIB15232_RS00300 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS00300 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS00310 PF07196 Flagellin hook IN motif ACIB15232_RS00310 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS00310 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS00325 PF02348 Cytidylyltransferase ACIB15232_RS00335 PF00483 Nucleotidyl transferase ACIB15232_RS00340 PF02585 GlcNAc-PI de-N-acetylase ACIB15232_RS00345 PF02911 Formyl transferase, C-terminal domain ACIB15232_RS00345 PF00551 Formyl transferase ACIB15232_RS00345 PF01370 NAD dependent epimerase/dehydratase family ACIB15232_RS00350 PF02350 UDP-N-acetylglucosamine 2-epimerase ACIB15232_RS00355 PF08666 SAF domain ACIB15232_RS00355 PF03102 NeuB family ACIB15232_RS00365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACIB15232_RS00370 PF02719 Polysaccharide biosynthesis protein ACIB15232_RS00380 PF00154 recA bacterial DNA recombination protein ACIB15232_RS00385 PF00113 Enolase, C-terminal TIM barrel domain ACIB15232_RS00385 PF03952 Enolase, N-terminal domain ACIB15232_RS00400 PF04055 Radical SAM superfamily ACIB15232_RS00400 PF06968 Biotin and Thiamin Synthesis associated domain ACIB15232_RS00410 PF13368 Topoisomerase C-terminal repeat ACIB15232_RS00410 PF01751 Toprim domain ACIB15232_RS00410 PF01131 DNA topoisomerase ACIB15232_RS00415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACIB15232_RS00420 PF02621 Menaquinone biosynthesis ACIB15232_RS00425 PF01165 Ribosomal protein S21 ACIB15232_RS00430 PF01967 MoaC family ACIB15232_RS00445 PF00361 Proton-conducting membrane transporter ACIB15232_RS00450 PF00361 Proton-conducting membrane transporter ACIB15232_RS00450 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACIB15232_RS00455 PF00361 Proton-conducting membrane transporter ACIB15232_RS00455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACIB15232_RS00460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACIB15232_RS00465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACIB15232_RS00470 PF12838 4Fe-4S dicluster domain ACIB15232_RS00475 PF00146 NADH dehydrogenase ACIB15232_RS00480 PF12838 4Fe-4S dicluster domain ACIB15232_RS00480 PF00384 Molybdopterin oxidoreductase ACIB15232_RS00480 PF01568 Molydopterin dinucleotide binding domain ACIB15232_RS00480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACIB15232_RS00480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACIB15232_RS00495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACIB15232_RS00500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACIB15232_RS00505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACIB15232_RS00510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACIB15232_RS00515 PF17758 Proteasomal ATPase OB N-terminal domain ACIB15232_RS00515 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS00515 PF16450 Proteasomal ATPase OB C-terminal domain ACIB15232_RS00530 PF01740 STAS domain ACIB15232_RS00530 PF00916 Sulfate permease family ACIB15232_RS00535 PF01261 Xylose isomerase-like TIM barrel ACIB15232_RS00540 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS00550 PF02677 Epoxyqueuosine reductase QueH ACIB15232_RS00555 PF02684 Lipid-A-disaccharide synthetase ACIB15232_RS00560 PF07977 FabA-like domain ACIB15232_RS00565 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS00565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACIB15232_RS00570 PF07724 AAA domain (Cdc48 subfamily) ACIB15232_RS00570 PF06689 ClpX C4-type zinc finger ACIB15232_RS00570 PF10431 C-terminal, D2-small domain, of ClpB protein ACIB15232_RS00585 PF00677 Lumazine binding domain ACIB15232_RS00590 PF01134 Glucose inhibited division protein A ACIB15232_RS00590 PF13932 GidA associated domain ACIB15232_RS00595 PF05958 tRNA (Uracil-5-)-methyltransferase ACIB15232_RS00600 PF00270 DEAD/DEAH box helicase ACIB15232_RS00600 PF00271 Helicase conserved C-terminal domain ACIB15232_RS00600 PF17191 RecG wedge domain ACIB15232_RS00610 PF14602 Hexapeptide repeat of succinyl-transferase ACIB15232_RS00610 PF12804 MobA-like NTP transferase domain ACIB15232_RS00615 PF02441 Flavoprotein ACIB15232_RS00615 PF04127 DNA / pantothenate metabolism flavoprotein ACIB15232_RS00620 PF01255 Putative undecaprenyl diphosphate synthase ACIB15232_RS00635 PF01416 tRNA pseudouridine synthase ACIB15232_RS00640 PF01628 HrcA protein C terminal domain ACIB15232_RS00645 PF01025 GrpE ACIB15232_RS00650 PF00012 Hsp70 protein ACIB15232_RS00655 PF03562 MltA specific insert domain ACIB15232_RS00655 PF06725 3D domain ACIB15232_RS00665 PF02666 Phosphatidylserine decarboxylase ACIB15232_RS00670 PF00563 EAL domain ACIB15232_RS00670 PF08495 FIST N domain ACIB15232_RS00670 PF10442 FIST C domain ACIB15232_RS00670 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS00685 PF18030 RimK PreATP-grasp domain ACIB15232_RS00685 PF08443 RimK-like ATP-grasp domain ACIB15232_RS00690 PF00581 Rhodanese-like domain ACIB15232_RS00695 PF00085 Thioredoxin ACIB15232_RS00700 PF00085 Thioredoxin ACIB15232_RS00700 PF02683 Cytochrome C biogenesis protein transmembrane region ACIB15232_RS00700 PF11412 Disulphide bond corrector protein DsbC ACIB15232_RS00710 PF00939 Sodium:sulfate symporter transmembrane region ACIB15232_RS00740 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS00740 PF00072 Response regulator receiver domain ACIB15232_RS00745 PF17820 PDZ domain ACIB15232_RS00745 PF13180 PDZ domain ACIB15232_RS00750 PF00920 Dehydratase family ACIB15232_RS00800 PF01051 Initiator Replication protein ACIB15232_RS00810 PF02491 SHS2 domain inserted in FTSA ACIB15232_RS00840 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS00840 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS00840 PF07196 Flagellin hook IN motif ACIB15232_RS00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS00855 PF00072 Response regulator receiver domain ACIB15232_RS00855 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS00860 PF00239 Resolvase, N terminal domain ACIB15232_RS00860 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS00895 PF00005 ABC transporter ACIB15232_RS00905 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACIB15232_RS00910 PF01142 tRNA pseudouridine synthase D (TruD) ACIB15232_RS00915 PF15437 Plasminogen-binding protein pgbA C-terminal ACIB15232_RS00925 PF03572 Peptidase family S41 ACIB15232_RS00925 PF13180 PDZ domain ACIB15232_RS00930 PF01259 SAICAR synthetase ACIB15232_RS00935 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ACIB15232_RS00950 PF01553 Acyltransferase ACIB15232_RS00955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACIB15232_RS00960 PF02416 mttA/Hcf106 family ACIB15232_RS00965 PF02416 mttA/Hcf106 family ACIB15232_RS00970 PF00750 tRNA synthetases class I (R) ACIB15232_RS00970 PF03485 Arginyl tRNA synthetase N terminal domain ACIB15232_RS00970 PF05746 DALR anticodon binding domain ACIB15232_RS00980 PF01467 Cytidylyltransferase-like ACIB15232_RS00985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACIB15232_RS00985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACIB15232_RS00990 PF00162 Phosphoglycerate kinase ACIB15232_RS00995 PF00121 Triosephosphate isomerase ACIB15232_RS01005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACIB15232_RS01005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACIB15232_RS01010 PF00800 Prephenate dehydratase ACIB15232_RS01010 PF01817 Chorismate mutase type II ACIB15232_RS01010 PF01842 ACT domain ACIB15232_RS01015 PF00155 Aminotransferase class I and II ACIB15232_RS01020 PF02779 Transketolase, pyrimidine binding domain ACIB15232_RS01020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACIB15232_RS01020 PF02780 Transketolase, C-terminal domain ACIB15232_RS01025 PF03150 Di-haem cytochrome c peroxidase ACIB15232_RS01025 PF00034 Cytochrome c ACIB15232_RS01030 PF02545 Maf-like protein ACIB15232_RS01040 PF00877 NlpC/P60 family ACIB15232_RS01045 PF00877 NlpC/P60 family ACIB15232_RS01065 PF02272 DHHA1 domain ACIB15232_RS01065 PF01411 tRNA synthetases class II (A) ACIB15232_RS01065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACIB15232_RS01070 PF00085 Thioredoxin ACIB15232_RS01075 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS01080 PF05173 Dihydrodipicolinate reductase, C-terminus ACIB15232_RS01080 PF01113 Dihydrodipicolinate reductase, N-terminus ACIB15232_RS01085 PF00156 Phosphoribosyl transferase domain ACIB15232_RS01085 PF13537 Glutamine amidotransferase domain ACIB15232_RS01095 PF03466 LysR substrate binding domain ACIB15232_RS01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACIB15232_RS01100 PF13361 UvrD-like helicase C-terminal domain ACIB15232_RS01100 PF00580 UvrD/REP helicase N-terminal domain ACIB15232_RS01105 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACIB15232_RS01110 PF00288 GHMP kinases N terminal domain ACIB15232_RS01115 PF01668 SmpB protein ACIB15232_RS01120 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACIB15232_RS01165 PF03462 PCRF domain ACIB15232_RS01165 PF00472 RF-1 domain ACIB15232_RS01170 PF08207 Elongation factor P (EF-P) KOW-like domain ACIB15232_RS01170 PF09285 Elongation factor P, C-terminal ACIB15232_RS01170 PF01132 Elongation factor P (EF-P) OB domain ACIB15232_RS01175 PF01842 ACT domain ACIB15232_RS01175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACIB15232_RS01175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACIB15232_RS01180 PF00575 S1 RNA binding domain ACIB15232_RS01185 PF02401 LytB protein ACIB15232_RS01190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACIB15232_RS01195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACIB15232_RS01195 PF03147 Ferredoxin-fold anticodon binding domain ACIB15232_RS01195 PF03484 tRNA synthetase B5 domain ACIB15232_RS01195 PF01588 Putative tRNA binding domain ACIB15232_RS01200 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACIB15232_RS01200 PF01409 tRNA synthetases class II core domain (F) ACIB15232_RS01205 PF01230 HIT domain ACIB15232_RS01210 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACIB15232_RS01215 PF02801 Beta-ketoacyl synthase, C-terminal domain ACIB15232_RS01215 PF00109 Beta-ketoacyl synthase, N-terminal domain ACIB15232_RS01220 PF00550 Phosphopantetheine attachment site ACIB15232_RS01240 PF06508 Queuosine biosynthesis protein QueC ACIB15232_RS01250 PF04452 RNA methyltransferase ACIB15232_RS01265 PF00032 Cytochrome b(C-terminal)/b6/petD ACIB15232_RS01265 PF00033 Cytochrome b/b6/petB ACIB15232_RS01275 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS01280 PF00696 Amino acid kinase family ACIB15232_RS01285 PF13361 UvrD-like helicase C-terminal domain ACIB15232_RS01285 PF00580 UvrD/REP helicase N-terminal domain ACIB15232_RS01295 PF00119 ATP synthase A chain ACIB15232_RS01300 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS01300 PF13291 ACT domain ACIB15232_RS01305 PF01717 Cobalamin-independent synthase, Catalytic domain ACIB15232_RS01305 PF08267 Cobalamin-independent synthase, N-terminal domain ACIB15232_RS01315 PF01746 tRNA (Guanine-1)-methyltransferase ACIB15232_RS01320 PF01245 Ribosomal protein L19 ACIB15232_RS01325 PF09335 SNARE associated Golgi protein ACIB15232_RS01330 PF00155 Aminotransferase class I and II ACIB15232_RS01345 PF01042 Endoribonuclease L-PSP ACIB15232_RS01355 PF17674 HHH domain ACIB15232_RS01355 PF09371 Tex-like protein N-terminal domain ACIB15232_RS01355 PF00575 S1 RNA binding domain ACIB15232_RS01355 PF16921 Tex protein YqgF-like domain ACIB15232_RS01370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACIB15232_RS01370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACIB15232_RS01375 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS01375 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS01375 PF00563 EAL domain ACIB15232_RS01380 PF08402 TOBE domain ACIB15232_RS01380 PF00005 ABC transporter ACIB15232_RS01385 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS01390 PF13416 Bacterial extracellular solute-binding protein ACIB15232_RS01395 PF00117 Glutamine amidotransferase class-I ACIB15232_RS01435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACIB15232_RS01440 PF00905 Penicillin binding protein transpeptidase domain ACIB15232_RS01440 PF03717 Penicillin-binding Protein dimerisation domain ACIB15232_RS01440 PF03793 PASTA domain ACIB15232_RS01445 PF01098 Cell cycle protein ACIB15232_RS01450 PF03033 Glycosyltransferase family 28 N-terminal domain ACIB15232_RS01450 PF04101 Glycosyltransferase family 28 C-terminal domain ACIB15232_RS01455 PF02673 Bacitracin resistance protein BacA ACIB15232_RS01460 PF02621 Menaquinone biosynthesis ACIB15232_RS01470 PF02391 MoaE protein ACIB15232_RS01480 PF00120 Glutamine synthetase, catalytic domain ACIB15232_RS01480 PF03951 Glutamine synthetase, beta-Grasp domain ACIB15232_RS01485 PF00912 Transglycosylase ACIB15232_RS01485 PF00905 Penicillin binding protein transpeptidase domain ACIB15232_RS01495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ACIB15232_RS01495 PF01676 Metalloenzyme superfamily ACIB15232_RS01500 PF00953 Glycosyl transferase family 4 ACIB15232_RS01500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ACIB15232_RS01505 PF08245 Mur ligase middle domain ACIB15232_RS01530 PF03143 Elongation factor Tu C-terminal domain ACIB15232_RS01530 PF03144 Elongation factor Tu domain 2 ACIB15232_RS01530 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS01535 PF00471 Ribosomal protein L33 ACIB15232_RS01550 PF02357 Transcription termination factor nusG ACIB15232_RS01555 PF03946 Ribosomal protein L11, N-terminal domain ACIB15232_RS01555 PF00298 Ribosomal protein L11, RNA binding domain ACIB15232_RS01560 PF00687 Ribosomal protein L1p/L10e family ACIB15232_RS01565 PF00466 Ribosomal protein L10 ACIB15232_RS01570 PF16320 Ribosomal protein L7/L12 dimerisation domain ACIB15232_RS01570 PF00542 Ribosomal protein L7/L12 C-terminal domain ACIB15232_RS01575 PF04563 RNA polymerase beta subunit ACIB15232_RS01575 PF04561 RNA polymerase Rpb2, domain 2 ACIB15232_RS01575 PF04560 RNA polymerase Rpb2, domain 7 ACIB15232_RS01575 PF04565 RNA polymerase Rpb2, domain 3 ACIB15232_RS01575 PF00562 RNA polymerase Rpb2, domain 6 ACIB15232_RS01575 PF10385 RNA polymerase beta subunit external 1 domain ACIB15232_RS01580 PF00623 RNA polymerase Rpb1, domain 2 ACIB15232_RS01580 PF04983 RNA polymerase Rpb1, domain 3 ACIB15232_RS01580 PF04997 RNA polymerase Rpb1, domain 1 ACIB15232_RS01580 PF04998 RNA polymerase Rpb1, domain 5 ACIB15232_RS01580 PF05000 RNA polymerase Rpb1, domain 4 ACIB15232_RS01595 PF00672 HAMP domain ACIB15232_RS01595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS01595 PF02203 Tar ligand binding domain homologue ACIB15232_RS01600 PF00578 AhpC/TSA family ACIB15232_RS01600 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACIB15232_RS01605 PF00085 Thioredoxin ACIB15232_RS01610 PF02659 Putative manganese efflux pump ACIB15232_RS01615 PF01545 Cation efflux family ACIB15232_RS01615 PF16916 Dimerisation domain of Zinc Transporter ACIB15232_RS01640 PF08447 PAS fold ACIB15232_RS01640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS01645 PF07690 Major Facilitator Superfamily ACIB15232_RS01655 PF00164 Ribosomal protein S12/S23 ACIB15232_RS01660 PF00177 Ribosomal protein S7p/S5e ACIB15232_RS01665 PF03764 Elongation factor G, domain IV ACIB15232_RS01665 PF00679 Elongation factor G C-terminus ACIB15232_RS01665 PF14492 Elongation Factor G, domain II ACIB15232_RS01665 PF03144 Elongation factor Tu domain 2 ACIB15232_RS01665 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS01670 PF01513 ATP-NAD kinase ACIB15232_RS01675 PF13476 AAA domain ACIB15232_RS01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS01680 PF17200 Single Cache domain 2 ACIB15232_RS01680 PF00672 HAMP domain ACIB15232_RS01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS01680 PF17200 Single Cache domain 2 ACIB15232_RS01680 PF00672 HAMP domain ACIB15232_RS01685 PF01136 Peptidase family U32 ACIB15232_RS01695 PF00731 AIR carboxylase ACIB15232_RS01705 PF02091 Glycyl-tRNA synthetase alpha subunit ACIB15232_RS01710 PF01784 NIF3 (NGG1p interacting factor 3) ACIB15232_RS01720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACIB15232_RS01720 PF02390 Putative methyltransferase ACIB15232_RS01725 PF00849 RNA pseudouridylate synthase ACIB15232_RS01730 PF02978 Signal peptide binding domain ACIB15232_RS01730 PF02881 SRP54-type protein, helical bundle domain ACIB15232_RS01730 PF00448 SRP54-type protein, GTPase domain ACIB15232_RS01735 PF00886 Ribosomal protein S16 ACIB15232_RS01745 PF01782 RimM N-terminal domain ACIB15232_RS01760 PF00460 Flagella basal body rod protein ACIB15232_RS01760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACIB15232_RS01765 PF00072 Response regulator receiver domain ACIB15232_RS01775 PF00460 Flagella basal body rod protein ACIB15232_RS01775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACIB15232_RS01780 PF00460 Flagella basal body rod protein ACIB15232_RS01785 PF01514 Secretory protein of YscJ/FliF family ACIB15232_RS01785 PF08345 Flagellar M-ring protein C-terminal ACIB15232_RS01790 PF14842 FliG N-terminal domain ACIB15232_RS01790 PF14841 FliG middle domain ACIB15232_RS01790 PF01706 FliG C-terminal domain ACIB15232_RS01800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACIB15232_RS01810 PF00460 Flagella basal body rod protein ACIB15232_RS01810 PF07196 Flagellin hook IN motif ACIB15232_RS01810 PF07559 Flagellar basal body protein FlaE ACIB15232_RS01810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACIB15232_RS01815 PF07559 Flagellar basal body protein FlaE ACIB15232_RS01815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACIB15232_RS01815 PF00460 Flagella basal body rod protein ACIB15232_RS01815 PF07196 Flagellin hook IN motif ACIB15232_RS01835 PF16973 Flagellar motor switch protein FliN N-terminal ACIB15232_RS01835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACIB15232_RS01855 PF00448 SRP54-type protein, GTPase domain ACIB15232_RS01860 PF10609 NUBPL iron-transfer P-loop NTPase ACIB15232_RS01870 PF02049 Flagellar hook-basal body complex protein FliE ACIB15232_RS01875 PF00460 Flagella basal body rod protein ACIB15232_RS01875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACIB15232_RS01890 PF01312 FlhB HrpN YscU SpaS Family ACIB15232_RS01900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACIB15232_RS01900 PF18269 T3SS EscN ATPase C-terminal domain ACIB15232_RS01905 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS01905 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS01910 PF00771 FHIPEP family ACIB15232_RS01920 PF01613 Flavin reductase like domain ACIB15232_RS01925 PF01741 Large-conductance mechanosensitive channel, MscL ACIB15232_RS01930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS01930 PF02203 Tar ligand binding domain homologue ACIB15232_RS01930 PF00672 HAMP domain ACIB15232_RS01950 PF01575 MaoC like domain ACIB15232_RS01955 PF13193 AMP-binding enzyme C-terminal domain ACIB15232_RS01955 PF00501 AMP-binding enzyme ACIB15232_RS01970 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACIB15232_RS01975 PF10431 C-terminal, D2-small domain, of ClpB protein ACIB15232_RS01975 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS01975 PF07724 AAA domain (Cdc48 subfamily) ACIB15232_RS01975 PF17871 AAA lid domain ACIB15232_RS01975 PF02861 Clp amino terminal domain, pathogenicity island component ACIB15232_RS02010 PF00665 Integrase core domain ACIB15232_RS02010 PF13333 Integrase core domain ACIB15232_RS02010 PF13276 HTH-like domain ACIB15232_RS02015 PF03631 Virulence factor BrkB ACIB15232_RS02020 PF02913 FAD linked oxidases, C-terminal domain ACIB15232_RS02020 PF01565 FAD binding domain ACIB15232_RS02030 PF00578 AhpC/TSA family ACIB15232_RS02035 PF13649 Methyltransferase domain ACIB15232_RS02045 PF01479 S4 domain ACIB15232_RS02045 PF01728 FtsJ-like methyltransferase ACIB15232_RS02050 PF01205 Uncharacterized protein family UPF0029 ACIB15232_RS02050 PF09186 Domain of unknown function (DUF1949) ACIB15232_RS02065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACIB15232_RS02075 PF00793 DAHP synthetase I family ACIB15232_RS02080 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACIB15232_RS02085 PF01029 NusB family ACIB15232_RS02090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACIB15232_RS02155 PF00459 Inositol monophosphatase family ACIB15232_RS02160 PF00037 4Fe-4S binding domain ACIB15232_RS02170 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACIB15232_RS02185 PF01219 Prokaryotic diacylglycerol kinase ACIB15232_RS02195 PF00483 Nucleotidyl transferase ACIB15232_RS02200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACIB15232_RS02205 PF04321 RmlD substrate binding domain ACIB15232_RS02210 PF16363 GDP-mannose 4,6 dehydratase ACIB15232_RS02225 PF00535 Glycosyl transferase family 2 ACIB15232_RS02230 PF00535 Glycosyl transferase family 2 ACIB15232_RS02240 PF03062 MBOAT, membrane-bound O-acyltransferase family ACIB15232_RS02250 PF03062 MBOAT, membrane-bound O-acyltransferase family ACIB15232_RS02260 PF13439 Glycosyltransferase Family 4 ACIB15232_RS02260 PF00534 Glycosyl transferases group 1 ACIB15232_RS02275 PF00535 Glycosyl transferase family 2 ACIB15232_RS02290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACIB15232_RS02295 PF00884 Sulfatase ACIB15232_RS02300 PF13580 SIS domain ACIB15232_RS02305 PF00294 pfkB family carbohydrate kinase ACIB15232_RS02305 PF01467 Cytidylyltransferase-like ACIB15232_RS02310 PF01370 NAD dependent epimerase/dehydratase family ACIB15232_RS02315 PF08645 Polynucleotide kinase 3 phosphatase ACIB15232_RS02325 PF00830 Ribosomal L28 family ACIB15232_RS02335 PF01960 ArgJ family ACIB15232_RS02345 PF00521 DNA gyrase/topoisomerase IV, subunit A ACIB15232_RS02345 PF03989 DNA gyrase C-terminal domain, beta-propeller ACIB15232_RS02350 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACIB15232_RS02350 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACIB15232_RS02360 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACIB15232_RS02400 PF09905 DNA-binding protein VF530 ACIB15232_RS02420 PF01209 ubiE/COQ5 methyltransferase family ACIB15232_RS02425 PF02601 Exonuclease VII, large subunit ACIB15232_RS02425 PF13742 OB-fold nucleic acid binding domain ACIB15232_RS02430 PF01584 CheW-like domain ACIB15232_RS02435 PF00072 Response regulator receiver domain ACIB15232_RS02440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACIB15232_RS02445 PF02261 Aspartate decarboxylase ACIB15232_RS02450 PF02575 YbaB/EbfC DNA-binding family ACIB15232_RS02455 PF00348 Polyprenyl synthetase ACIB15232_RS02460 PF00166 Chaperonin 10 Kd subunit ACIB15232_RS02465 PF00118 TCP-1/cpn60 chaperonin family ACIB15232_RS02480 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS02480 PF00072 Response regulator receiver domain ACIB15232_RS02485 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS02485 PF18719 ArlS sensor domain ACIB15232_RS02490 PF00459 Inositol monophosphatase family ACIB15232_RS02495 PF01380 SIS domain ACIB15232_RS02500 PF02772 S-adenosylmethionine synthetase, central domain ACIB15232_RS02500 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACIB15232_RS02500 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACIB15232_RS02505 PF01039 Carboxyl transferase domain ACIB15232_RS02505 PF17848 Acetyl-coA carboxylase zinc finger domain ACIB15232_RS02510 PF02581 Thiamine monophosphate synthase ACIB15232_RS02515 PF02590 Predicted SPOUT methyltransferase ACIB15232_RS02525 PF01207 Dihydrouridine synthase (Dus) ACIB15232_RS02535 PF01434 Peptidase family M41 ACIB15232_RS02535 PF17862 AAA+ lid domain ACIB15232_RS02535 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS02540 PF01594 AI-2E family transporter ACIB15232_RS02545 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACIB15232_RS02545 PF17864 RuvB AAA lid domain ACIB15232_RS02545 PF05491 RuvB C-terminal winged helix domain ACIB15232_RS02550 PF02548 Ketopantoate hydroxymethyltransferase ACIB15232_RS02555 PF00290 Tryptophan synthase alpha chain ACIB15232_RS02560 PF04377 Arginine-tRNA-protein transferase, C terminus ACIB15232_RS02560 PF04376 Arginine-tRNA-protein transferase, N terminus ACIB15232_RS02570 PF02421 Ferrous iron transport protein B ACIB15232_RS02570 PF07670 Nucleoside recognition ACIB15232_RS02570 PF07664 Ferrous iron transport protein B C terminus ACIB15232_RS02580 PF01475 Ferric uptake regulator family ACIB15232_RS02595 PF00072 Response regulator receiver domain ACIB15232_RS02595 PF12833 Helix-turn-helix domain ACIB15232_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS02600 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS02600 PF00989 PAS fold ACIB15232_RS02600 PF08447 PAS fold ACIB15232_RS02625 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS02630 PF00293 NUDIX domain ACIB15232_RS02630 PF13344 Haloacid dehalogenase-like hydrolase ACIB15232_RS02635 PF00149 Calcineurin-like phosphoesterase ACIB15232_RS02655 PF01047 MarR family ACIB15232_RS02665 PF13426 PAS domain ACIB15232_RS02665 PF08447 PAS fold ACIB15232_RS02665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS02685 PF16653 Saccharopine dehydrogenase C-terminal domain ACIB15232_RS02685 PF03435 Saccharopine dehydrogenase NADP binding domain ACIB15232_RS02690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACIB15232_RS02695 PF03976 Polyphosphate kinase 2 (PPK2) ACIB15232_RS02700 PF03976 Polyphosphate kinase 2 (PPK2) ACIB15232_RS02705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACIB15232_RS02705 PF05698 Bacterial trigger factor protein (TF) C-terminus ACIB15232_RS02705 PF05697 Bacterial trigger factor protein (TF) ACIB15232_RS02710 PF00574 Clp protease ACIB15232_RS02715 PF01327 Polypeptide deformylase ACIB15232_RS02725 PF01078 Magnesium chelatase, subunit ChlI ACIB15232_RS02725 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACIB15232_RS02735 PF01695 IstB-like ATP binding protein ACIB15232_RS02745 PF00665 Integrase core domain ACIB15232_RS02770 PF01078 Magnesium chelatase, subunit ChlI ACIB15232_RS02770 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACIB15232_RS02775 PF00682 HMGL-like ACIB15232_RS02775 PF08502 LeuA allosteric (dimerisation) domain ACIB15232_RS02805 PF01695 IstB-like ATP binding protein ACIB15232_RS02810 PF00665 Integrase core domain ACIB15232_RS02810 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS02830 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS02845 PF00440 Bacterial regulatory proteins, tetR family ACIB15232_RS02845 PF08359 YsiA-like protein, C-terminal region ACIB15232_RS02855 PF10544 T5orf172 domain ACIB15232_RS02860 PF10544 T5orf172 domain ACIB15232_RS02865 PF01043 SecA preprotein cross-linking domain ACIB15232_RS02865 PF07516 SecA Wing and Scaffold domain ACIB15232_RS02865 PF07517 SecA DEAD-like domain ACIB15232_RS02875 PF05192 MutS domain III ACIB15232_RS02875 PF00488 MutS domain V ACIB15232_RS02875 PF05190 MutS family domain IV ACIB15232_RS02875 PF05188 MutS domain II ACIB15232_RS02875 PF01624 MutS domain I ACIB15232_RS02880 PF01914 MarC family integral membrane protein ACIB15232_RS02885 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS02885 PF00072 Response regulator receiver domain ACIB15232_RS02890 PF00977 Histidine biosynthesis protein ACIB15232_RS02895 PF00117 Glutamine amidotransferase class-I ACIB15232_RS02905 PF06421 GTP-binding protein LepA C-terminus ACIB15232_RS02905 PF03144 Elongation factor Tu domain 2 ACIB15232_RS02905 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS02905 PF00679 Elongation factor G C-terminus ACIB15232_RS02910 PF13488 Glycine zipper ACIB15232_RS02910 PF00691 OmpA family ACIB15232_RS02915 PF05736 OprF membrane domain ACIB15232_RS02915 PF00691 OmpA family ACIB15232_RS02920 PF14572 Phosphoribosyl synthetase-associated domain ACIB15232_RS02920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACIB15232_RS02955 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACIB15232_RS02960 PF01321 Creatinase/Prolidase N-terminal domain ACIB15232_RS02960 PF00557 Metallopeptidase family M24 ACIB15232_RS02965 PF01220 Dehydroquinase class II ACIB15232_RS02970 PF01979 Amidohydrolase family ACIB15232_RS02975 PF01343 Peptidase family S49 ACIB15232_RS02980 PF00871 Acetokinase family ACIB15232_RS02985 PF01515 Phosphate acetyl/butaryl transferase ACIB15232_RS02990 PF00871 Acetokinase family ACIB15232_RS02995 PF00871 Acetokinase family ACIB15232_RS03000 PF02811 PHP domain ACIB15232_RS03000 PF14579 Helix-hairpin-helix motif ACIB15232_RS03000 PF00929 Exonuclease ACIB15232_RS03000 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACIB15232_RS03000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACIB15232_RS03010 PF00474 Sodium:solute symporter family ACIB15232_RS03020 PF00474 Sodium:solute symporter family ACIB15232_RS03030 PF10431 C-terminal, D2-small domain, of ClpB protein ACIB15232_RS03030 PF17871 AAA lid domain ACIB15232_RS03030 PF07724 AAA domain (Cdc48 subfamily) ACIB15232_RS03030 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS03040 PF14579 Helix-hairpin-helix motif ACIB15232_RS03040 PF02811 PHP domain ACIB15232_RS03040 PF00929 Exonuclease ACIB15232_RS03040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACIB15232_RS03040 PF11490 DNA polymerase III polC-type N-terminus II ACIB15232_RS03040 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACIB15232_RS03050 PF00474 Sodium:solute symporter family ACIB15232_RS03060 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS03060 PF00072 Response regulator receiver domain ACIB15232_RS03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS03065 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS03110 PF00994 Probable molybdopterin binding domain ACIB15232_RS03110 PF18146 Damage-inducible protein CinA KH domain ACIB15232_RS03110 PF02464 Competence-damaged protein ACIB15232_RS03115 PF06039 Malate:quinone oxidoreductase (Mqo) ACIB15232_RS03120 PF08264 Anticodon-binding domain of tRNA ACIB15232_RS03120 PF00133 tRNA synthetases class I (I, L, M and V) ACIB15232_RS03135 PF02875 Mur ligase family, glutamate ligase domain ACIB15232_RS03135 PF08245 Mur ligase middle domain ACIB15232_RS03140 PF00318 Ribosomal protein S2 ACIB15232_RS03145 PF00889 Elongation factor TS ACIB15232_RS03150 PF00005 ABC transporter ACIB15232_RS03160 PF00625 Guanylate kinase ACIB15232_RS03165 PF00072 Response regulator receiver domain ACIB15232_RS03165 PF02954 Bacterial regulatory protein, Fis family ACIB15232_RS03165 PF00158 Sigma-54 interaction domain ACIB15232_RS03170 PF00403 Heavy-metal-associated domain ACIB15232_RS03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACIB15232_RS03185 PF00005 ABC transporter ACIB15232_RS03190 PF00762 Ferrochelatase ACIB15232_RS03195 PF01368 DHH family ACIB15232_RS03195 PF02833 DHHA2 domain ACIB15232_RS03200 PF00924 Mechanosensitive ion channel ACIB15232_RS03205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACIB15232_RS03205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACIB15232_RS03215 PF00491 Arginase family ACIB15232_RS03220 PF00313 'Cold-shock' DNA-binding domain ACIB15232_RS03225 PF00005 ABC transporter ACIB15232_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS03240 PF12849 PBP superfamily domain ACIB15232_RS03245 PF04073 Aminoacyl-tRNA editing domain ACIB15232_RS03275 PF04403 Paraquat-inducible protein A ACIB15232_RS03280 PF02470 MlaD protein ACIB15232_RS03300 PF00230 Major intrinsic protein ACIB15232_RS03310 PF00183 Hsp90 protein ACIB15232_RS03315 PF13533 Biotin-lipoyl like ACIB15232_RS03320 PF00005 ABC transporter ACIB15232_RS03335 PF01964 Radical SAM ThiC family ACIB15232_RS03340 PF17284 Spermidine synthase tetramerisation domain ACIB15232_RS03345 PF08447 PAS fold ACIB15232_RS03345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS03360 PF00563 EAL domain ACIB15232_RS03360 PF08495 FIST N domain ACIB15232_RS03360 PF10442 FIST C domain ACIB15232_RS03360 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS03375 PF00271 Helicase conserved C-terminal domain ACIB15232_RS03375 PF03880 DbpA RNA binding domain ACIB15232_RS03375 PF00270 DEAD/DEAH box helicase ACIB15232_RS03380 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS03380 PF00563 EAL domain ACIB15232_RS03380 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS03385 PF01243 Pyridoxamine 5'-phosphate oxidase ACIB15232_RS03385 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACIB15232_RS03390 PF08447 PAS fold ACIB15232_RS03390 PF13426 PAS domain ACIB15232_RS03390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS03405 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS03405 PF00563 EAL domain ACIB15232_RS03405 PF08448 PAS fold ACIB15232_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS03415 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS03420 PF00005 ABC transporter ACIB15232_RS03425 PF00950 ABC 3 transport family ACIB15232_RS03430 PF13509 S1 domain ACIB15232_RS03430 PF17783 CvfB-like winged helix domain ACIB15232_RS03435 PF08534 Redoxin ACIB15232_RS03445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACIB15232_RS03445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACIB15232_RS03450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACIB15232_RS03460 PF13361 UvrD-like helicase C-terminal domain ACIB15232_RS03460 PF00580 UvrD/REP helicase N-terminal domain ACIB15232_RS03465 PF00999 Sodium/hydrogen exchanger family ACIB15232_RS03465 PF02080 TrkA-C domain ACIB15232_RS03465 PF02254 TrkA-N domain ACIB15232_RS03470 PF00174 Oxidoreductase molybdopterin binding domain ACIB15232_RS03475 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACIB15232_RS03480 PF00034 Cytochrome c ACIB15232_RS03550 PF00589 Phage integrase family ACIB15232_RS03550 PF14659 Phage integrase, N-terminal SAM-like domain ACIB15232_RS03595 PF09106 Elongation factor SelB, winged helix ACIB15232_RS03595 PF09107 Elongation factor SelB, winged helix ACIB15232_RS03595 PF09105 Elongation factor SelB, winged helix ACIB15232_RS03595 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS03595 PF03144 Elongation factor Tu domain 2 ACIB15232_RS03600 PF03841 L-seryl-tRNA selenium transferase ACIB15232_RS03625 PF00175 Oxidoreductase NAD-binding domain ACIB15232_RS03625 PF00111 2Fe-2S iron-sulfur cluster binding domain ACIB15232_RS03625 PF00970 Oxidoreductase FAD-binding domain ACIB15232_RS03635 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACIB15232_RS03645 PF00255 Glutathione peroxidase ACIB15232_RS03655 PF01966 HD domain ACIB15232_RS03670 PF02769 AIR synthase related protein, C-terminal domain ACIB15232_RS03670 PF00586 AIR synthase related protein, N-terminal domain ACIB15232_RS03675 PF01841 Transglutaminase-like superfamily ACIB15232_RS03690 PF00072 Response regulator receiver domain ACIB15232_RS03695 PF00072 Response regulator receiver domain ACIB15232_RS03695 PF13188 PAS domain ACIB15232_RS03695 PF08448 PAS fold ACIB15232_RS03695 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS03720 PF12838 4Fe-4S dicluster domain ACIB15232_RS03720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACIB15232_RS03720 PF01568 Molydopterin dinucleotide binding domain ACIB15232_RS03720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACIB15232_RS03720 PF00384 Molybdopterin oxidoreductase ACIB15232_RS03725 PF00384 Molybdopterin oxidoreductase ACIB15232_RS03725 PF01568 Molydopterin dinucleotide binding domain ACIB15232_RS03725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACIB15232_RS03730 PF13247 4Fe-4S dicluster domain ACIB15232_RS03740 PF02634 FdhD/NarQ family ACIB15232_RS03755 PF00994 Probable molybdopterin binding domain ACIB15232_RS03755 PF03454 MoeA C-terminal region (domain IV) ACIB15232_RS03755 PF03453 MoeA N-terminal region (domain I and II) ACIB15232_RS03760 PF12849 PBP superfamily domain ACIB15232_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS03770 PF00005 ABC transporter ACIB15232_RS03785 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS03785 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACIB15232_RS03785 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ACIB15232_RS03790 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS03790 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACIB15232_RS03790 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ACIB15232_RS03800 PF11799 impB/mucB/samB family C-terminal domain ACIB15232_RS03800 PF00817 impB/mucB/samB family ACIB15232_RS03805 PF01384 Phosphate transporter family ACIB15232_RS03820 PF00682 HMGL-like ACIB15232_RS03825 PF00075 RNase H ACIB15232_RS03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS03830 PF02203 Tar ligand binding domain homologue ACIB15232_RS03830 PF00672 HAMP domain ACIB15232_RS03845 PF00271 Helicase conserved C-terminal domain ACIB15232_RS03845 PF00270 DEAD/DEAH box helicase ACIB15232_RS03850 PF00403 Heavy-metal-associated domain ACIB15232_RS03855 PF01263 Aldose 1-epimerase ACIB15232_RS03860 PF04055 Radical SAM superfamily ACIB15232_RS03860 PF08497 Radical SAM N-terminal ACIB15232_RS03865 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS03865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACIB15232_RS03870 PF02817 e3 binding domain ACIB15232_RS03870 PF00364 Biotin-requiring enzyme ACIB15232_RS03870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACIB15232_RS03875 PF17831 Pyruvate dehydrogenase E1 component middle domain ACIB15232_RS03875 PF00456 Transketolase, thiamine diphosphate binding domain ACIB15232_RS03880 PF10437 Bacterial lipoate protein ligase C-terminus ACIB15232_RS03880 PF03099 Biotin/lipoate A/B protein ligase family ACIB15232_RS03885 PF04055 Radical SAM superfamily ACIB15232_RS03900 PF02910 Fumarate reductase flavoprotein C-term ACIB15232_RS03900 PF00890 FAD binding domain ACIB15232_RS03905 PF02540 NAD synthase ACIB15232_RS03905 PF00958 GMP synthase C terminal domain ACIB15232_RS03905 PF00117 Glutamine amidotransferase class-I ACIB15232_RS03910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACIB15232_RS03930 PF00561 alpha/beta hydrolase fold ACIB15232_RS03940 PF02926 THUMP domain ACIB15232_RS03940 PF01170 Putative RNA methylase family UPF0020 ACIB15232_RS03940 PF10672 S-adenosylmethionine-dependent methyltransferase ACIB15232_RS03950 PF03734 L,D-transpeptidase catalytic domain ACIB15232_RS03950 PF01471 Putative peptidoglycan binding domain ACIB15232_RS03975 PF00005 ABC transporter ACIB15232_RS03975 PF17760 UvrA interaction domain ACIB15232_RS03975 PF17755 UvrA DNA-binding domain ACIB15232_RS03995 PF02926 THUMP domain ACIB15232_RS03995 PF02568 Thiamine biosynthesis protein (ThiI) ACIB15232_RS04010 PF12823 Domain of unknown function (DUF3817) ACIB15232_RS04025 PF05661 Protein of unknown function (DUF808) ACIB15232_RS04030 PF01522 Polysaccharide deacetylase ACIB15232_RS04060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACIB15232_RS04060 PF18074 Primosomal protein N C-terminal domain ACIB15232_RS04060 PF17764 3′ DNA-binding domain (3′BD) ACIB15232_RS04060 PF00270 DEAD/DEAH box helicase ACIB15232_RS04060 PF00271 Helicase conserved C-terminal domain ACIB15232_RS04065 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ACIB15232_RS04065 PF14602 Hexapeptide repeat of succinyl-transferase ACIB15232_RS04075 PF00005 ABC transporter ACIB15232_RS04075 PF12848 ABC transporter ACIB15232_RS04075 PF16326 ABC transporter C-terminal domain ACIB15232_RS04080 PF18381 YcaO cyclodehydratase C-terminal domain ACIB15232_RS04080 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ACIB15232_RS04090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACIB15232_RS04090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACIB15232_RS04090 PF02805 Metal binding domain of Ada ACIB15232_RS04090 PF12833 Helix-turn-helix domain ACIB15232_RS04095 PF00464 Serine hydroxymethyltransferase ACIB15232_RS04105 PF02254 TrkA-N domain ACIB15232_RS04105 PF00999 Sodium/hydrogen exchanger family ACIB15232_RS04115 PF02600 Disulfide bond formation protein DsbB ACIB15232_RS04130 PF08534 Redoxin ACIB15232_RS04135 PF13419 Haloacid dehalogenase-like hydrolase ACIB15232_RS04140 PF03641 Possible lysine decarboxylase ACIB15232_RS04155 PF04333 MlaA lipoprotein ACIB15232_RS04160 PF01709 Transcriptional regulator ACIB15232_RS04180 PF00563 EAL domain ACIB15232_RS04180 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS04180 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS04190 PF06434 Aconitate hydratase 2 N-terminus ACIB15232_RS04190 PF00330 Aconitase family (aconitate hydratase) ACIB15232_RS04190 PF11791 Aconitate B N-terminal domain ACIB15232_RS04195 PF16916 Dimerisation domain of Zinc Transporter ACIB15232_RS04195 PF01545 Cation efflux family ACIB15232_RS04200 PF00155 Aminotransferase class I and II ACIB15232_RS04205 PF01863 Protein of unknown function DUF45 ACIB15232_RS04225 PF00005 ABC transporter ACIB15232_RS04230 PF02390 Putative methyltransferase ACIB15232_RS04235 PF02903 Alpha amylase, N-terminal ig-like domain ACIB15232_RS04235 PF00128 Alpha amylase, catalytic domain ACIB15232_RS04240 PF00849 RNA pseudouridylate synthase ACIB15232_RS04240 PF01479 S4 domain ACIB15232_RS04245 PF01098 Cell cycle protein ACIB15232_RS04250 PF03544 Gram-negative bacterial TonB protein C-terminal ACIB15232_RS04255 PF00202 Aminotransferase class-III ACIB15232_RS04260 PF06865 Pyrimidine/purine nucleoside phosphorylase ACIB15232_RS04275 PF04545 Sigma-70, region 4 ACIB15232_RS04275 PF04542 Sigma-70 region 2 ACIB15232_RS04275 PF04539 Sigma-70 region 3 ACIB15232_RS04275 PF00140 Sigma-70 factor, region 1.2 ACIB15232_RS04280 PF00694 Aconitase C-terminal domain ACIB15232_RS04285 PF00180 Isocitrate/isopropylmalate dehydrogenase ACIB15232_RS04300 PF00444 Ribosomal protein L36 ACIB15232_RS04305 PF00416 Ribosomal protein S13/S18 ACIB15232_RS04310 PF00411 Ribosomal protein S11 ACIB15232_RS04315 PF00163 Ribosomal protein S4/S9 N-terminal domain ACIB15232_RS04315 PF01479 S4 domain ACIB15232_RS04320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACIB15232_RS04320 PF01000 RNA polymerase Rpb3/RpoA insert domain ACIB15232_RS04320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACIB15232_RS04325 PF01196 Ribosomal protein L17 ACIB15232_RS04330 PF01425 Amidase ACIB15232_RS04335 PF00571 CBS domain ACIB15232_RS04335 PF00478 IMP dehydrogenase / GMP reductase domain ACIB15232_RS04350 PF00672 HAMP domain ACIB15232_RS04350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS04350 PF02203 Tar ligand binding domain homologue ACIB15232_RS04355 PF01653 NAD-dependent DNA ligase adenylation domain ACIB15232_RS04355 PF00533 BRCA1 C Terminus (BRCT) domain ACIB15232_RS04355 PF03120 NAD-dependent DNA ligase OB-fold domain ACIB15232_RS04355 PF12826 Helix-hairpin-helix motif ACIB15232_RS04360 PF02203 Tar ligand binding domain homologue ACIB15232_RS04360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS04360 PF00672 HAMP domain ACIB15232_RS04365 PF03738 Glutathionylspermidine synthase preATP-grasp ACIB15232_RS04375 PF00005 ABC transporter ACIB15232_RS04380 PF00893 Small Multidrug Resistance protein ACIB15232_RS04400 PF02525 Flavodoxin-like fold ACIB15232_RS04405 PF01161 Phosphatidylethanolamine-binding protein ACIB15232_RS04430 PF03601 Conserved hypothetical protein 698 ACIB15232_RS04445 PF01548 Transposase ACIB15232_RS04445 PF02371 Transposase IS116/IS110/IS902 family ACIB15232_RS04455 PF01638 HxlR-like helix-turn-helix ACIB15232_RS04460 PF02525 Flavodoxin-like fold ACIB15232_RS04465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACIB15232_RS04470 PF00881 Nitroreductase family ACIB15232_RS04480 PF12848 ABC transporter ACIB15232_RS04480 PF00005 ABC transporter ACIB15232_RS04485 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACIB15232_RS04500 PF11066 Protein of unknown function (DUF2867) ACIB15232_RS04500 PF13460 NAD(P)H-binding ACIB15232_RS04505 PF13462 Thioredoxin ACIB15232_RS04510 PF01625 Peptide methionine sulfoxide reductase ACIB15232_RS04510 PF08534 Redoxin ACIB15232_RS04510 PF01641 SelR domain ACIB15232_RS04515 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS04520 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS04525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACIB15232_RS04535 PF11849 Domain of unknown function (DUF3369) ACIB15232_RS04540 PF00813 FliP family ACIB15232_RS04545 PF03717 Penicillin-binding Protein dimerisation domain ACIB15232_RS04545 PF00905 Penicillin binding protein transpeptidase domain ACIB15232_RS04565 PF08448 PAS fold ACIB15232_RS04565 PF08447 PAS fold ACIB15232_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS04570 PF00842 Alanine racemase, C-terminal domain ACIB15232_RS04570 PF01168 Alanine racemase, N-terminal domain ACIB15232_RS04575 PF08459 UvrC Helix-hairpin-helix N-terminal ACIB15232_RS04575 PF01541 GIY-YIG catalytic domain ACIB15232_RS04575 PF02151 UvrB/uvrC motif ACIB15232_RS04580 PF04973 Nicotinamide mononucleotide transporter ACIB15232_RS04590 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS04595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACIB15232_RS04625 PF02678 Pirin ACIB15232_RS04625 PF17954 Quercetinase C-terminal cupin domain ACIB15232_RS04630 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS04630 PF00672 HAMP domain ACIB15232_RS04635 PF00072 Response regulator receiver domain ACIB15232_RS04635 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS04640 PF01914 MarC family integral membrane protein ACIB15232_RS04645 PF09962 Uncharacterized conserved protein (DUF2196) ACIB15232_RS04650 PF11849 Domain of unknown function (DUF3369) ACIB15232_RS04665 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS04665 PF00239 Resolvase, N terminal domain ACIB15232_RS04670 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS04670 PF00072 Response regulator receiver domain ACIB15232_RS04675 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS04675 PF08521 Two-component sensor kinase N-terminal ACIB15232_RS04680 PF04076 Bacterial OB fold (BOF) protein ACIB15232_RS04685 PF00872 Transposase, Mutator family ACIB15232_RS04690 PF00872 Transposase, Mutator family ACIB15232_RS04720 PF01740 STAS domain ACIB15232_RS04720 PF00916 Sulfate permease family ACIB15232_RS04725 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS04725 PF00239 Resolvase, N terminal domain ACIB15232_RS04745 PF01695 IstB-like ATP binding protein ACIB15232_RS04750 PF00665 Integrase core domain ACIB15232_RS04785 PF02463 RecF/RecN/SMC N terminal domain ACIB15232_RS04860 PF12167 Arm DNA-binding domain ACIB15232_RS04860 PF00589 Phage integrase family ACIB15232_RS04865 PF03061 Thioesterase superfamily ACIB15232_RS04875 PF16491 CAAX prenyl protease N-terminal, five membrane helices ACIB15232_RS04875 PF01435 Peptidase family M48 ACIB15232_RS04880 PF02646 RmuC family ACIB15232_RS04885 PF04228 Putative neutral zinc metallopeptidase ACIB15232_RS04895 PF03454 MoeA C-terminal region (domain IV) ACIB15232_RS04895 PF03453 MoeA N-terminal region (domain I and II) ACIB15232_RS04895 PF00994 Probable molybdopterin binding domain ACIB15232_RS04905 PF01171 PP-loop family ACIB15232_RS04915 PF00085 Thioredoxin ACIB15232_RS04930 PF00360 Phytochrome region ACIB15232_RS04930 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS04930 PF00563 EAL domain ACIB15232_RS04930 PF01590 GAF domain ACIB15232_RS04940 PF02541 Ppx/GppA phosphatase family ACIB15232_RS04950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACIB15232_RS04950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACIB15232_RS04950 PF00205 Thiamine pyrophosphate enzyme, central domain ACIB15232_RS04955 PF10369 Small subunit of acetolactate synthase ACIB15232_RS04960 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACIB15232_RS04960 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS04965 PF17854 FtsK alpha domain ACIB15232_RS04965 PF01580 FtsK/SpoIIIE family ACIB15232_RS04965 PF09397 Ftsk gamma domain ACIB15232_RS04975 PF05525 Branched-chain amino acid transport protein ACIB15232_RS04980 PF03741 Integral membrane protein TerC family ACIB15232_RS04985 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS04985 PF00072 Response regulator receiver domain ACIB15232_RS04990 PF08448 PAS fold ACIB15232_RS04990 PF08447 PAS fold ACIB15232_RS04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS04995 PF00490 Delta-aminolevulinic acid dehydratase ACIB15232_RS05000 PF00925 GTP cyclohydrolase II ACIB15232_RS05005 PF02527 rRNA small subunit methyltransferase G ACIB15232_RS05020 PF02092 Glycyl-tRNA synthetase beta subunit ACIB15232_RS05025 PF00589 Phage integrase family ACIB15232_RS05025 PF18644 Phage integrase SAM-like domain ACIB15232_RS05030 PF00925 GTP cyclohydrolase II ACIB15232_RS05030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACIB15232_RS05035 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACIB15232_RS05035 PF00005 ABC transporter ACIB15232_RS05045 PF02885 Glycosyl transferase family, helical bundle domain ACIB15232_RS05045 PF00591 Glycosyl transferase family, a/b domain ACIB15232_RS05055 PF00764 Arginosuccinate synthase ACIB15232_RS05060 PF00501 AMP-binding enzyme ACIB15232_RS05060 PF13193 AMP-binding enzyme C-terminal domain ACIB15232_RS05065 PF03062 MBOAT, membrane-bound O-acyltransferase family ACIB15232_RS05075 PF00550 Phosphopantetheine attachment site ACIB15232_RS05080 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS05085 PF00005 ABC transporter ACIB15232_RS05100 PF13190 PDGLE domain ACIB15232_RS05100 PF01891 Cobalt uptake substrate-specific transmembrane region ACIB15232_RS05110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ACIB15232_RS05115 PF02769 AIR synthase related protein, C-terminal domain ACIB15232_RS05115 PF00586 AIR synthase related protein, N-terminal domain ACIB15232_RS05125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACIB15232_RS05125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACIB15232_RS05130 PF01924 Hydrogenase formation hypA family ACIB15232_RS05135 PF01455 HupF/HypC family ACIB15232_RS05140 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACIB15232_RS05155 PF01300 Telomere recombination ACIB15232_RS05155 PF17788 HypF Kae1-like domain ACIB15232_RS05155 PF00708 Acylphosphatase ACIB15232_RS05155 PF07503 HypF finger ACIB15232_RS05165 PF01750 Hydrogenase maturation protease ACIB15232_RS05170 PF01292 Prokaryotic cytochrome b561 ACIB15232_RS05175 PF00374 Nickel-dependent hydrogenase ACIB15232_RS05180 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACIB15232_RS05180 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ACIB15232_RS05180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACIB15232_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS05190 PF08448 PAS fold ACIB15232_RS05190 PF08447 PAS fold ACIB15232_RS05200 PF13662 Toprim domain ACIB15232_RS05200 PF02132 RecR protein ACIB15232_RS05205 PF01556 DnaJ C terminal domain ACIB15232_RS05205 PF00226 DnaJ domain ACIB15232_RS05205 PF00684 DnaJ central domain ACIB15232_RS05225 PF00753 Metallo-beta-lactamase superfamily ACIB15232_RS05230 PF13188 PAS domain ACIB15232_RS05230 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS05230 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS05230 PF00563 EAL domain ACIB15232_RS05235 PF01590 GAF domain ACIB15232_RS05235 PF00360 Phytochrome region ACIB15232_RS05235 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS05235 PF00563 EAL domain ACIB15232_RS05240 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS05240 PF07196 Flagellin hook IN motif ACIB15232_RS05240 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS05240 PF00700 Bacterial flagellin C-terminal helical region ACIB15232_RS05240 PF00669 Bacterial flagellin N-terminal helical region ACIB15232_RS05240 PF07196 Flagellin hook IN motif ACIB15232_RS05245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACIB15232_RS05245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACIB15232_RS05245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACIB15232_RS05245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACIB15232_RS05250 PF00483 Nucleotidyl transferase ACIB15232_RS05255 PF00342 Phosphoglucose isomerase ACIB15232_RS05275 PF03372 Endonuclease/Exonuclease/phosphatase family ACIB15232_RS05280 PF08003 Protein of unknown function (DUF1698) ACIB15232_RS05285 PF01578 Cytochrome C assembly protein ACIB15232_RS05285 PF05140 ResB-like family ACIB15232_RS05290 PF01546 Peptidase family M20/M25/M40 ACIB15232_RS05290 PF07687 Peptidase dimerisation domain ACIB15232_RS05300 PF00488 MutS domain V ACIB15232_RS05300 PF01713 Smr domain ACIB15232_RS05310 PF00994 Probable molybdopterin binding domain ACIB15232_RS05320 PF01434 Peptidase family M41 ACIB15232_RS05320 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS05320 PF17862 AAA+ lid domain ACIB15232_RS05320 PF06480 FtsH Extracellular ACIB15232_RS05325 PF00919 Uncharacterized protein family UPF0004 ACIB15232_RS05325 PF04055 Radical SAM superfamily ACIB15232_RS05335 PF01761 3-dehydroquinate synthase ACIB15232_RS05350 PF01432 Peptidase family M3 ACIB15232_RS05355 PF17827 PrmC N-terminal domain ACIB15232_RS05355 PF05175 Methyltransferase small domain ACIB15232_RS05360 PF04055 Radical SAM superfamily ACIB15232_RS05360 PF06969 HemN C-terminal domain ACIB15232_RS05365 PF00293 NUDIX domain ACIB15232_RS05370 PF01842 ACT domain ACIB15232_RS05370 PF00696 Amino acid kinase family ACIB15232_RS05370 PF13840 ACT domain ACIB15232_RS05385 PF00809 Pterin binding enzyme ACIB15232_RS05390 PF00571 CBS domain ACIB15232_RS05390 PF03471 Transporter associated domain ACIB15232_RS05390 PF01595 Cyclin M transmembrane N-terminal domain ACIB15232_RS05410 PF01593 Flavin containing amine oxidoreductase ACIB15232_RS05425 PF00106 short chain dehydrogenase ACIB15232_RS05430 PF02153 Prephenate dehydrogenase ACIB15232_RS05430 PF01842 ACT domain ACIB15232_RS05435 PF01103 Surface antigen ACIB15232_RS05435 PF07244 Surface antigen variable number repeat ACIB15232_RS05440 PF04055 Radical SAM superfamily ACIB15232_RS05445 PF05193 Peptidase M16 inactive domain ACIB15232_RS05450 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACIB15232_RS05475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACIB15232_RS05485 PF01588 Putative tRNA binding domain ACIB15232_RS05485 PF09334 tRNA synthetases class I (M) ACIB15232_RS05485 PF00133 tRNA synthetases class I (I, L, M and V) ACIB15232_RS05500 PF01293 Phosphoenolpyruvate carboxykinase ACIB15232_RS05505 PF00072 Response regulator receiver domain ACIB15232_RS05505 PF01339 CheB methylesterase ACIB15232_RS05510 PF03975 CheD chemotactic sensory transduction ACIB15232_RS05515 PF03705 CheR methyltransferase, all-alpha domain ACIB15232_RS05515 PF01739 CheR methyltransferase, SAM binding domain ACIB15232_RS05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS05520 PF01584 CheW-like domain ACIB15232_RS05520 PF02895 Signal transducing histidine kinase, homodimeric domain ACIB15232_RS05520 PF01627 Hpt domain ACIB15232_RS05520 PF09078 CheY binding ACIB15232_RS05525 PF00072 Response regulator receiver domain ACIB15232_RS05530 PF03725 3' exoribonuclease family, domain 2 ACIB15232_RS05530 PF00013 KH domain ACIB15232_RS05530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACIB15232_RS05530 PF01138 3' exoribonuclease family, domain 1 ACIB15232_RS05530 PF00575 S1 RNA binding domain ACIB15232_RS05540 PF04453 LPS transport system D ACIB15232_RS05540 PF03968 OstA-like protein ACIB15232_RS05550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACIB15232_RS05550 PF02843 Phosphoribosylglycinamide synthetase, C domain ACIB15232_RS05550 PF02844 Phosphoribosylglycinamide synthetase, N domain ACIB15232_RS05560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACIB15232_RS05560 PF01926 50S ribosome-binding GTPase ACIB15232_RS05580 PF03971 Monomeric isocitrate dehydrogenase ACIB15232_RS05585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACIB15232_RS05585 PF00056 lactate/malate dehydrogenase, NAD binding domain ACIB15232_RS05610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACIB15232_RS05610 PF01266 FAD dependent oxidoreductase ACIB15232_RS05615 PF00072 Response regulator receiver domain ACIB15232_RS05625 PF08448 PAS fold ACIB15232_RS05625 PF08447 PAS fold ACIB15232_RS05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS05630 PF00226 DnaJ domain ACIB15232_RS05630 PF01556 DnaJ C terminal domain ACIB15232_RS05635 PF13411 MerR HTH family regulatory protein ACIB15232_RS05655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACIB15232_RS05655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACIB15232_RS05660 PF06969 HemN C-terminal domain ACIB15232_RS05660 PF04055 Radical SAM superfamily ACIB15232_RS05665 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACIB15232_RS05670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACIB15232_RS05675 PF02540 NAD synthase ACIB15232_RS05690 PF00226 DnaJ domain ACIB15232_RS05690 PF05099 Tellurite resistance protein TerB ACIB15232_RS05710 PF01979 Amidohydrolase family ACIB15232_RS05710 PF13382 Adenine deaminase C-terminal domain ACIB15232_RS05715 PF02416 mttA/Hcf106 family ACIB15232_RS05720 PF00902 Sec-independent protein translocase protein (TatC) ACIB15232_RS05725 PF02547 Queuosine biosynthesis protein ACIB15232_RS05730 PF13307 Helicase C-terminal domain ACIB15232_RS05730 PF00929 Exonuclease ACIB15232_RS05750 PF02665 Nitrate reductase gamma subunit ACIB15232_RS05750 PF13183 4Fe-4S dicluster domain ACIB15232_RS05750 PF02754 Cysteine-rich domain ACIB15232_RS05755 PF01790 Prolipoprotein diacylglyceryl transferase ACIB15232_RS05770 PF01367 5'-3' exonuclease, C-terminal SAM fold ACIB15232_RS05770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACIB15232_RS05770 PF00476 DNA polymerase family A ACIB15232_RS05775 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS05775 PF05230 MASE2 domain ACIB15232_RS05785 PF02348 Cytidylyltransferase ACIB15232_RS05800 PF01795 MraW methylase family ACIB15232_RS05810 PF00216 Bacterial DNA-binding protein ACIB15232_RS05825 PF00589 Phage integrase family ACIB15232_RS05825 PF02899 Phage integrase, N-terminal SAM-like domain ACIB15232_RS05840 PF00072 Response regulator receiver domain ACIB15232_RS05840 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS05885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACIB15232_RS05885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACIB15232_RS05885 PF02142 MGS-like domain ACIB15232_RS05890 PF00899 ThiF family ACIB15232_RS05895 PF02609 Exonuclease VII small subunit ACIB15232_RS05900 PF00561 alpha/beta hydrolase fold ACIB15232_RS05910 PF04143 Sulphur transport ACIB15232_RS05915 PF00091 Tubulin/FtsZ family, GTPase domain ACIB15232_RS05915 PF12327 FtsZ family, C-terminal domain ACIB15232_RS05920 PF02491 SHS2 domain inserted in FTSA ACIB15232_RS05940 PF03960 ArsC family ACIB15232_RS05945 PF00849 RNA pseudouridylate synthase ACIB15232_RS05945 PF01479 S4 domain ACIB15232_RS05955 PF13614 AAA domain ACIB15232_RS05960 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACIB15232_RS05965 PF05971 RNA methyltransferase ACIB15232_RS05970 PF03737 Aldolase/RraA ACIB15232_RS05975 PF00872 Transposase, Mutator family ACIB15232_RS05985 PF13476 AAA domain ACIB15232_RS06010 PF01145 SPFH domain / Band 7 family ACIB15232_RS06010 PF16200 C-terminal region of band_7 ACIB15232_RS06025 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS06025 PF00072 Response regulator receiver domain ACIB15232_RS06040 PF00588 SpoU rRNA Methylase family ACIB15232_RS06045 PF01842 ACT domain ACIB15232_RS06045 PF00551 Formyl transferase ACIB15232_RS06050 PF02578 Multi-copper polyphenol oxidoreductase laccase ACIB15232_RS06060 PF08501 Shikimate dehydrogenase substrate binding domain ACIB15232_RS06210 PF02311 AraC-like ligand binding domain ACIB15232_RS06210 PF12833 Helix-turn-helix domain ACIB15232_RS06215 PF00682 HMGL-like ACIB15232_RS06215 PF08502 LeuA allosteric (dimerisation) domain ACIB15232_RS06220 PF00239 Resolvase, N terminal domain ACIB15232_RS06220 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS06235 PF13614 AAA domain ACIB15232_RS06245 PF18766 SWI2/SNF2 ATPase ACIB15232_RS06245 PF11867 Domain of unknown function (DUF3387) ACIB15232_RS06245 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACIB15232_RS06265 PF01420 Type I restriction modification DNA specificity domain ACIB15232_RS06270 PF12161 HsdM N-terminal domain ACIB15232_RS06270 PF02384 N-6 DNA Methylase ACIB15232_RS06285 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS06290 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain ACIB15232_RS06290 PF01113 Dihydrodipicolinate reductase, N-terminus ACIB15232_RS06295 PF00672 HAMP domain ACIB15232_RS06295 PF02203 Tar ligand binding domain homologue ACIB15232_RS06295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS06315 PF00271 Helicase conserved C-terminal domain ACIB15232_RS06315 PF00270 DEAD/DEAH box helicase ACIB15232_RS06320 PF00248 Aldo/keto reductase family ACIB15232_RS06340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACIB15232_RS06340 PF00929 Exonuclease ACIB15232_RS06340 PF02811 PHP domain ACIB15232_RS06340 PF14579 Helix-hairpin-helix motif ACIB15232_RS06340 PF14480 DNA polymerase III polC-type N-terminus I ACIB15232_RS06340 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACIB15232_RS06340 PF11490 DNA polymerase III polC-type N-terminus II ACIB15232_RS06345 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACIB15232_RS06350 PF00834 Ribulose-phosphate 3 epimerase family ACIB15232_RS06355 PF02253 Phospholipase A1 ACIB15232_RS06365 PF00293 NUDIX domain ACIB15232_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS06375 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS06375 PF00072 Response regulator receiver domain ACIB15232_RS06380 PF04461 Protein of unknown function (DUF520) ACIB15232_RS06385 PF04241 Protein of unknown function (DUF423) ACIB15232_RS06390 PF00156 Phosphoribosyl transferase domain ACIB15232_RS06420 PF00072 Response regulator receiver domain ACIB15232_RS06420 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS06425 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS06425 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACIB15232_RS06430 PF00270 DEAD/DEAH box helicase ACIB15232_RS06430 PF00271 Helicase conserved C-terminal domain ACIB15232_RS06435 PF01032 FecCD transport family ACIB15232_RS06440 PF00005 ABC transporter ACIB15232_RS06445 PF01497 Periplasmic binding protein ACIB15232_RS06450 PF07715 TonB-dependent Receptor Plug Domain ACIB15232_RS06450 PF00593 TonB dependent receptor ACIB15232_RS06475 PF03548 Outer membrane lipoprotein carrier protein LolA ACIB15232_RS06480 PF07517 SecA DEAD-like domain ACIB15232_RS06480 PF01043 SecA preprotein cross-linking domain ACIB15232_RS06480 PF02810 SEC-C motif ACIB15232_RS06480 PF00271 Helicase conserved C-terminal domain ACIB15232_RS06480 PF07516 SecA Wing and Scaffold domain ACIB15232_RS06485 PF02687 FtsX-like permease family ACIB15232_RS06485 PF12704 MacB-like periplasmic core domain ACIB15232_RS06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS06510 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS06510 PF00072 Response regulator receiver domain ACIB15232_RS06520 PF00005 ABC transporter ACIB15232_RS06520 PF00664 ABC transporter transmembrane region ACIB15232_RS06530 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS06530 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS06530 PF00563 EAL domain ACIB15232_RS06540 PF08212 Lipocalin-like domain ACIB15232_RS06545 PF00762 Ferrochelatase ACIB15232_RS06550 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ACIB15232_RS06565 PF03109 ABC1 family ACIB15232_RS06575 PF00563 EAL domain ACIB15232_RS06575 PF12792 CSS motif domain associated with EAL ACIB15232_RS06580 PF00072 Response regulator receiver domain ACIB15232_RS06580 PF04397 LytTr DNA-binding domain ACIB15232_RS06585 PF07694 5TMR of 5TMR-LYT ACIB15232_RS06585 PF13492 GAF domain ACIB15232_RS06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS06585 PF06580 Histidine kinase ACIB15232_RS06590 PF01593 Flavin containing amine oxidoreductase ACIB15232_RS06595 PF00875 DNA photolyase ACIB15232_RS06595 PF03441 FAD binding domain of DNA photolyase ACIB15232_RS06605 PF08338 Domain of unknown function (DUF1731) ACIB15232_RS06605 PF01370 NAD dependent epimerase/dehydratase family ACIB15232_RS06610 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACIB15232_RS06610 PF00933 Glycosyl hydrolase family 3 N terminal domain ACIB15232_RS06615 PF00684 DnaJ central domain ACIB15232_RS06615 PF00226 DnaJ domain ACIB15232_RS06615 PF01556 DnaJ C terminal domain ACIB15232_RS06620 PF01556 DnaJ C terminal domain ACIB15232_RS06620 PF00226 DnaJ domain ACIB15232_RS06620 PF00684 DnaJ central domain ACIB15232_RS06630 PF03061 Thioesterase superfamily ACIB15232_RS06635 PF00583 Acetyltransferase (GNAT) family ACIB15232_RS06640 PF01926 50S ribosome-binding GTPase ACIB15232_RS06660 PF00475 Imidazoleglycerol-phosphate dehydratase ACIB15232_RS06665 PF03330 Lytic transglycolase ACIB15232_RS06665 PF05036 Sporulation related domain ACIB15232_RS06670 PF01464 Transglycosylase SLT domain ACIB15232_RS06670 PF01476 LysM domain ACIB15232_RS06675 PF01026 TatD related DNase ACIB15232_RS06685 PF07724 AAA domain (Cdc48 subfamily) ACIB15232_RS06685 PF10431 C-terminal, D2-small domain, of ClpB protein ACIB15232_RS06690 PF00227 Proteasome subunit ACIB15232_RS06695 PF01281 Ribosomal protein L9, N-terminal domain ACIB15232_RS06695 PF03948 Ribosomal protein L9, C-terminal domain ACIB15232_RS06705 PF02441 Flavoprotein ACIB15232_RS06710 PF01467 Cytidylyltransferase-like ACIB15232_RS06715 PF02223 Thymidylate kinase ACIB15232_RS06720 PF03129 Anticodon binding domain ACIB15232_RS06720 PF13393 Histidyl-tRNA synthetase ACIB15232_RS06725 PF17810 Arginine decarboxylase helical bundle domain ACIB15232_RS06725 PF17944 Arginine decarboxylase C-terminal helical extension ACIB15232_RS06725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACIB15232_RS06730 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS06730 PF06426 Serine acetyltransferase, N-terminal ACIB15232_RS06735 PF01925 Sulfite exporter TauE/SafE ACIB15232_RS06750 PF12848 ABC transporter ACIB15232_RS06750 PF16326 ABC transporter C-terminal domain ACIB15232_RS06750 PF00005 ABC transporter ACIB15232_RS06760 PF17158 Membrane-associated sensor, integral membrane domain ACIB15232_RS06760 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS06770 PF00072 Response regulator receiver domain ACIB15232_RS06770 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS06780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACIB15232_RS06790 PF00106 short chain dehydrogenase ACIB15232_RS06795 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS06795 PF12911 N-terminal TM domain of oligopeptide transport permease C ACIB15232_RS06805 PF01966 HD domain ACIB15232_RS06805 PF12072 Domain of unknown function (DUF3552) ACIB15232_RS06805 PF00013 KH domain ACIB15232_RS06810 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACIB15232_RS06815 PF00578 AhpC/TSA family ACIB15232_RS06820 PF00448 SRP54-type protein, GTPase domain ACIB15232_RS06830 PF00563 EAL domain ACIB15232_RS06830 PF03707 Bacterial signalling protein N terminal repeat ACIB15232_RS06830 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS06835 PF00034 Cytochrome c ACIB15232_RS06835 PF03150 Di-haem cytochrome c peroxidase ACIB15232_RS06860 PF18073 Rubredoxin metal binding domain ACIB15232_RS06870 PF02130 Uncharacterized protein family UPF0054 ACIB15232_RS06875 PF01475 Ferric uptake regulator family ACIB15232_RS06885 PF03023 Lipid II flippase MurJ ACIB15232_RS06890 PF00005 ABC transporter ACIB15232_RS06890 PF00664 ABC transporter transmembrane region ACIB15232_RS06895 PF01180 Dihydroorotate dehydrogenase ACIB15232_RS06905 PF00701 Dihydrodipicolinate synthetase family ACIB15232_RS06915 PF01066 CDP-alcohol phosphatidyltransferase ACIB15232_RS06920 PF02163 Peptidase family M50 ACIB15232_RS06920 PF17820 PDZ domain ACIB15232_RS06925 PF01168 Alanine racemase, N-terminal domain ACIB15232_RS06930 PF01361 Tautomerase enzyme ACIB15232_RS06940 PF00218 Indole-3-glycerol phosphate synthase ACIB15232_RS06950 PF03692 Putative zinc- or iron-chelating domain ACIB15232_RS06955 PF05175 Methyltransferase small domain ACIB15232_RS06965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ACIB15232_RS06965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ACIB15232_RS06965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ACIB15232_RS06970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACIB15232_RS06980 PF00465 Iron-containing alcohol dehydrogenase ACIB15232_RS06985 PF00155 Aminotransferase class I and II ACIB15232_RS07000 PF05191 Adenylate kinase, active site lid ACIB15232_RS07010 PF00152 tRNA synthetases class II (D, K and N) ACIB15232_RS07010 PF01336 OB-fold nucleic acid binding domain ACIB15232_RS07010 PF02938 GAD domain ACIB15232_RS07020 PF03167 Uracil DNA glycosylase superfamily ACIB15232_RS07025 PF01176 Translation initiation factor 1A / IF-1 ACIB15232_RS07030 PF00557 Metallopeptidase family M24 ACIB15232_RS07035 PF00344 SecY translocase ACIB15232_RS07040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACIB15232_RS07045 PF03719 Ribosomal protein S5, C-terminal domain ACIB15232_RS07045 PF00333 Ribosomal protein S5, N-terminal domain ACIB15232_RS07050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACIB15232_RS07055 PF00347 Ribosomal protein L6 ACIB15232_RS07060 PF00410 Ribosomal protein S8 ACIB15232_RS07065 PF00253 Ribosomal protein S14p/S29e ACIB15232_RS07070 PF00281 Ribosomal protein L5 ACIB15232_RS07070 PF00673 ribosomal L5P family C-terminus ACIB15232_RS07075 PF00467 KOW motif ACIB15232_RS07075 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACIB15232_RS07080 PF00238 Ribosomal protein L14p/L23e ACIB15232_RS07085 PF00366 Ribosomal protein S17 ACIB15232_RS07090 PF00831 Ribosomal L29 protein ACIB15232_RS07095 PF00252 Ribosomal protein L16p/L10e ACIB15232_RS07100 PF07650 KH domain ACIB15232_RS07100 PF00189 Ribosomal protein S3, C-terminal domain ACIB15232_RS07105 PF00237 Ribosomal protein L22p/L17e ACIB15232_RS07110 PF00203 Ribosomal protein S19 ACIB15232_RS07115 PF00181 Ribosomal Proteins L2, RNA binding domain ACIB15232_RS07115 PF03947 Ribosomal Proteins L2, C-terminal domain ACIB15232_RS07120 PF00276 Ribosomal protein L23 ACIB15232_RS07125 PF00573 Ribosomal protein L4/L1 family ACIB15232_RS07130 PF00297 Ribosomal protein L3 ACIB15232_RS07135 PF00338 Ribosomal protein S10p/S20e ACIB15232_RS07150 PF08245 Mur ligase middle domain ACIB15232_RS07150 PF02875 Mur ligase family, glutamate ligase domain ACIB15232_RS07150 PF01225 Mur ligase family, catalytic domain ACIB15232_RS07155 PF00561 alpha/beta hydrolase fold ACIB15232_RS07160 PF07478 D-ala D-ala ligase C-terminus ACIB15232_RS07160 PF01820 D-ala D-ala ligase N-terminus ACIB15232_RS07165 PF07499 RuvA, C-terminal domain ACIB15232_RS07165 PF01330 RuvA N terminal domain ACIB15232_RS07170 PF02203 Tar ligand binding domain homologue ACIB15232_RS07170 PF00672 HAMP domain ACIB15232_RS07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS07185 PF01142 tRNA pseudouridine synthase D (TruD) ACIB15232_RS07190 PF02769 AIR synthase related protein, C-terminal domain ACIB15232_RS07190 PF00586 AIR synthase related protein, N-terminal domain ACIB15232_RS07205 PF06865 Pyrimidine/purine nucleoside phosphorylase ACIB15232_RS07225 PF01926 50S ribosome-binding GTPase ACIB15232_RS07225 PF06071 Protein of unknown function (DUF933) ACIB15232_RS07235 PF13407 Periplasmic binding protein domain ACIB15232_RS07240 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS07240 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACIB15232_RS07245 PF13722 5TM C-terminal transporter carbon starvation CstA ACIB15232_RS07245 PF02554 Carbon starvation protein CstA ACIB15232_RS07280 PF07715 TonB-dependent Receptor Plug Domain ACIB15232_RS07280 PF00593 TonB dependent receptor ACIB15232_RS07285 PF17158 Membrane-associated sensor, integral membrane domain ACIB15232_RS07285 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS07290 PF00005 ABC transporter ACIB15232_RS07290 PF02687 FtsX-like permease family ACIB15232_RS07290 PF12704 MacB-like periplasmic core domain ACIB15232_RS07295 PF12704 MacB-like periplasmic core domain ACIB15232_RS07295 PF02687 FtsX-like permease family ACIB15232_RS07295 PF00005 ABC transporter ACIB15232_RS07310 PF01618 MotA/TolQ/ExbB proton channel family ACIB15232_RS07315 PF02472 Biopolymer transport protein ExbD/TolR ACIB15232_RS07325 PF00883 Cytosol aminopeptidase family, catalytic domain ACIB15232_RS07325 PF02789 Cytosol aminopeptidase family, N-terminal domain ACIB15232_RS07335 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS07340 PF00156 Phosphoribosyl transferase domain ACIB15232_RS07345 PF07963 Prokaryotic N-terminal methylation motif ACIB15232_RS07345 PF08334 Type II secretion system (T2SS), protein G ACIB15232_RS07350 PF00772 DnaB-like helicase N terminal domain ACIB15232_RS07350 PF03796 DnaB-like helicase C terminal domain ACIB15232_RS07355 PF04551 GcpE protein ACIB15232_RS07360 PF08447 PAS fold ACIB15232_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS07360 PF08448 PAS fold ACIB15232_RS07370 PF00152 tRNA synthetases class II (D, K and N) ACIB15232_RS07370 PF01336 OB-fold nucleic acid binding domain ACIB15232_RS07375 PF00464 Serine hydroxymethyltransferase ACIB15232_RS07385 PF04715 Anthranilate synthase component I, N terminal region ACIB15232_RS07385 PF00425 chorismate binding enzyme ACIB15232_RS07390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACIB15232_RS07395 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACIB15232_RS07405 PF00696 Amino acid kinase family ACIB15232_RS07410 PF01192 RNA polymerase Rpb6 ACIB15232_RS07415 PF02824 TGS domain ACIB15232_RS07415 PF04607 Region found in RelA / SpoT proteins ACIB15232_RS07415 PF13291 ACT domain ACIB15232_RS07420 PF00579 tRNA synthetases class I (W and Y) ACIB15232_RS07420 PF01479 S4 domain ACIB15232_RS07430 PF01520 N-acetylmuramoyl-L-alanine amidase ACIB15232_RS07445 PF01195 Peptidyl-tRNA hydrolase ACIB15232_RS07450 PF01386 Ribosomal L25p family ACIB15232_RS07450 PF14693 Ribosomal protein TL5, C-terminal domain ACIB15232_RS07455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACIB15232_RS07455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACIB15232_RS07460 PF10502 Signal peptidase, peptidase S26 ACIB15232_RS07465 PF02502 Ribose/Galactose Isomerase ACIB15232_RS07485 PF00730 HhH-GPD superfamily base excision DNA repair protein ACIB15232_RS07485 PF00633 Helix-hairpin-helix motif ACIB15232_RS07485 PF10576 Iron-sulfur binding domain of endonuclease III ACIB15232_RS07490 PF00271 Helicase conserved C-terminal domain ACIB15232_RS07490 PF04851 Type III restriction enzyme, res subunit ACIB15232_RS07490 PF02151 UvrB/uvrC motif ACIB15232_RS07490 PF12344 Ultra-violet resistance protein B ACIB15232_RS07490 PF17757 UvrB interaction domain ACIB15232_RS07500 PF03449 Transcription elongation factor, N-terminal ACIB15232_RS07500 PF01272 Transcription elongation factor, GreA/GreB, C-term ACIB15232_RS07505 PF00899 ThiF family ACIB15232_RS07510 PF00072 Response regulator receiver domain ACIB15232_RS07510 PF01584 CheW-like domain ACIB15232_RS07515 PF00206 Lyase ACIB15232_RS07515 PF14698 Argininosuccinate lyase C-terminal ACIB15232_RS07520 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS07520 PF07694 5TMR of 5TMR-LYT ACIB15232_RS07525 PF03448 MgtE intracellular N domain ACIB15232_RS07525 PF01769 Divalent cation transporter ACIB15232_RS07525 PF00571 CBS domain ACIB15232_RS07530 PF04324 BFD-like [2Fe-2S] binding domain ACIB15232_RS07530 PF01106 NifU-like domain ACIB15232_RS07530 PF01592 NifU-like N terminal domain ACIB15232_RS07535 PF01458 Uncharacterized protein family (UPF0051) ACIB15232_RS07540 PF00005 ABC transporter ACIB15232_RS07550 PF00266 Aminotransferase class-V ACIB15232_RS07555 PF02657 Fe-S metabolism associated domain ACIB15232_RS07560 PF01883 Iron-sulfur cluster assembly protein ACIB15232_RS07565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACIB15232_RS07565 PF00289 Biotin carboxylase, N-terminal domain ACIB15232_RS07565 PF02785 Biotin carboxylase C-terminal domain ACIB15232_RS07575 PF00672 HAMP domain ACIB15232_RS07575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS07575 PF02203 Tar ligand binding domain homologue ACIB15232_RS07580 PF08447 PAS fold ACIB15232_RS07580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS07585 PF13426 PAS domain ACIB15232_RS07585 PF08447 PAS fold ACIB15232_RS07585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS07595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACIB15232_RS07595 PF10414 Sirohaem synthase dimerisation region ACIB15232_RS07595 PF14824 Sirohaem biosynthesis protein central ACIB15232_RS07605 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS07605 PF05362 Lon protease (S16) C-terminal proteolytic domain ACIB15232_RS07605 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACIB15232_RS07610 PF13525 Outer membrane lipoprotein ACIB15232_RS07615 PF03807 NADP oxidoreductase coenzyme F420-dependent ACIB15232_RS07615 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACIB15232_RS07635 PF01725 Ham1 family ACIB15232_RS07640 PF07690 Major Facilitator Superfamily ACIB15232_RS07655 PF02698 DUF218 domain ACIB15232_RS07660 PF00753 Metallo-beta-lactamase superfamily ACIB15232_RS07660 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACIB15232_RS07675 PF08264 Anticodon-binding domain of tRNA ACIB15232_RS07675 PF00133 tRNA synthetases class I (I, L, M and V) ACIB15232_RS07675 PF10458 Valyl tRNA synthetase tRNA binding arm ACIB15232_RS07680 PF10414 Sirohaem synthase dimerisation region ACIB15232_RS07680 PF14824 Sirohaem biosynthesis protein central ACIB15232_RS07680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACIB15232_RS07690 PF00710 Asparaginase, N-terminal ACIB15232_RS07690 PF17763 Glutaminase/Asparaginase C-terminal domain ACIB15232_RS07695 PF00206 Lyase ACIB15232_RS07695 PF10415 Fumarase C C-terminus ACIB15232_RS07700 PF01048 Phosphorylase superfamily ACIB15232_RS07705 PF00698 Acyl transferase domain ACIB15232_RS07710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACIB15232_RS07720 PF00691 OmpA family ACIB15232_RS07720 PF01389 OmpA-like transmembrane domain ACIB15232_RS07725 PF04052 TolB amino-terminal domain ACIB15232_RS07735 PF02472 Biopolymer transport protein ExbD/TolR ACIB15232_RS07740 PF01618 MotA/TolQ/ExbB proton channel family ACIB15232_RS07745 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACIB15232_RS07750 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACIB15232_RS07750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACIB15232_RS07755 PF00231 ATP synthase ACIB15232_RS07760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACIB15232_RS07760 PF00306 ATP synthase alpha/beta chain, C terminal domain ACIB15232_RS07760 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACIB15232_RS07765 PF00213 ATP synthase delta (OSCP) subunit ACIB15232_RS07770 PF00430 ATP synthase B/B' CF(0) ACIB15232_RS07780 PF02195 ParB-like nuclease domain ACIB15232_RS07780 PF17762 HTH domain found in ParB protein ACIB15232_RS07785 PF13614 AAA domain ACIB15232_RS07800 PF00551 Formyl transferase ACIB15232_RS07800 PF02911 Formyl transferase, C-terminal domain ACIB15232_RS07805 PF00696 Amino acid kinase family ACIB15232_RS07810 PF01018 GTP1/OBG ACIB15232_RS07810 PF01926 50S ribosome-binding GTPase ACIB15232_RS07815 PF01016 Ribosomal L27 protein ACIB15232_RS07820 PF00829 Ribosomal prokaryotic L21 protein ACIB15232_RS07825 PF16730 DnaG-primase C-terminal, helicase-binding domain ACIB15232_RS07825 PF13662 Toprim domain ACIB15232_RS07825 PF08275 DNA primase catalytic core, N-terminal domain ACIB15232_RS07825 PF01807 CHC2 zinc finger ACIB15232_RS07835 PF14622 Ribonuclease-III-like ACIB15232_RS07835 PF00035 Double-stranded RNA binding motif ACIB15232_RS07840 PF01264 Chorismate synthase ACIB15232_RS07850 PF00884 Sulfatase ACIB15232_RS07855 PF01435 Peptidase family M48 ACIB15232_RS07865 PF00300 Histidine phosphatase superfamily (branch 1) ACIB15232_RS07875 PF10396 GTP-binding protein TrmE N-terminus ACIB15232_RS07875 PF01926 50S ribosome-binding GTPase ACIB15232_RS07875 PF12631 MnmE helical domain ACIB15232_RS07885 PF02096 60Kd inner membrane protein ACIB15232_RS07885 PF14849 YidC periplasmic domain ACIB15232_RS07890 PF01809 Putative membrane protein insertion efficiency factor ACIB15232_RS07895 PF00825 Ribonuclease P ACIB15232_RS07900 PF00468 Ribosomal protein L34 ACIB15232_RS07905 PF07724 AAA domain (Cdc48 subfamily) ACIB15232_RS07905 PF10431 C-terminal, D2-small domain, of ClpB protein ACIB15232_RS07905 PF17871 AAA lid domain ACIB15232_RS07905 PF02861 Clp amino terminal domain, pathogenicity island component ACIB15232_RS07905 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS07910 PF01351 Ribonuclease HII ACIB15232_RS07915 PF03976 Polyphosphate kinase 2 (PPK2) ACIB15232_RS07930 PF01625 Peptide methionine sulfoxide reductase ACIB15232_RS07940 PF00293 NUDIX domain ACIB15232_RS07945 PF00202 Aminotransferase class-III ACIB15232_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS07950 PF08447 PAS fold ACIB15232_RS07950 PF08448 PAS fold ACIB15232_RS07955 PF01808 AICARFT/IMPCHase bienzyme ACIB15232_RS07955 PF02142 MGS-like domain ACIB15232_RS07960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACIB15232_RS07960 PF02769 AIR synthase related protein, C-terminal domain ACIB15232_RS07960 PF00586 AIR synthase related protein, N-terminal domain ACIB15232_RS07970 PF01551 Peptidase family M23 ACIB15232_RS07970 PF01476 LysM domain ACIB15232_RS07970 PF08525 Opacity-associated protein A N-terminal motif ACIB15232_RS07975 PF01227 GTP cyclohydrolase I ACIB15232_RS07980 PF01544 CorA-like Mg2+ transporter protein ACIB15232_RS08000 PF01926 50S ribosome-binding GTPase ACIB15232_RS08000 PF07650 KH domain ACIB15232_RS08015 PF01053 Cys/Met metabolism PLP-dependent enzyme ACIB15232_RS08020 PF01053 Cys/Met metabolism PLP-dependent enzyme ACIB15232_RS08040 PF06965 Na+/H+ antiporter 1 ACIB15232_RS08045 PF03150 Di-haem cytochrome c peroxidase ACIB15232_RS08050 PF04116 Fatty acid hydroxylase superfamily ACIB15232_RS08075 PF00137 ATP synthase subunit C ACIB15232_RS08085 PF08448 PAS fold ACIB15232_RS08085 PF08447 PAS fold ACIB15232_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS08105 PF00171 Aldehyde dehydrogenase family ACIB15232_RS08115 PF13277 YmdB-like protein ACIB15232_RS08120 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS08125 PF00709 Adenylosuccinate synthetase ACIB15232_RS08130 PF00072 Response regulator receiver domain ACIB15232_RS08130 PF08769 Sporulation initiation factor Spo0A C terminal ACIB15232_RS08135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS08135 PF02743 Cache domain ACIB15232_RS08135 PF00672 HAMP domain ACIB15232_RS08150 PF00072 Response regulator receiver domain ACIB15232_RS08150 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS08160 PF00360 Phytochrome region ACIB15232_RS08160 PF00563 EAL domain ACIB15232_RS08160 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS08160 PF01590 GAF domain ACIB15232_RS08170 PF04357 TamB, inner membrane protein subunit of TAM complex ACIB15232_RS08185 PF00270 DEAD/DEAH box helicase ACIB15232_RS08185 PF17757 UvrB interaction domain ACIB15232_RS08185 PF03461 TRCF domain ACIB15232_RS08185 PF00271 Helicase conserved C-terminal domain ACIB15232_RS08185 PF02559 CarD-like/TRCF domain ACIB15232_RS08220 PF08245 Mur ligase middle domain ACIB15232_RS08220 PF02875 Mur ligase family, glutamate ligase domain ACIB15232_RS08230 PF00133 tRNA synthetases class I (I, L, M and V) ACIB15232_RS08230 PF09334 tRNA synthetases class I (M) ACIB15232_RS08230 PF13603 Leucyl-tRNA synthetase, Domain 2 ACIB15232_RS08240 PF01618 MotA/TolQ/ExbB proton channel family ACIB15232_RS08245 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACIB15232_RS08245 PF00691 OmpA family ACIB15232_RS08255 PF02355 Protein export membrane protein ACIB15232_RS08255 PF07549 SecD/SecF GG Motif ACIB15232_RS08260 PF02355 Protein export membrane protein ACIB15232_RS08265 PF02699 Preprotein translocase subunit ACIB15232_RS08285 PF01743 Poly A polymerase head domain ACIB15232_RS08285 PF12626 Polymerase A arginine-rich C-terminus ACIB15232_RS08285 PF12627 Probable RNA and SrmB- binding site of polymerase A ACIB15232_RS08290 PF05552 Conserved TM helix ACIB15232_RS08290 PF00924 Mechanosensitive ion channel ACIB15232_RS08295 PF03129 Anticodon binding domain ACIB15232_RS08295 PF04073 Aminoacyl-tRNA editing domain ACIB15232_RS08295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACIB15232_RS08300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACIB15232_RS08300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACIB15232_RS08300 PF01488 Shikimate / quinate 5-dehydrogenase ACIB15232_RS08305 PF00348 Polyprenyl synthetase ACIB15232_RS08315 PF00815 Histidinol dehydrogenase ACIB15232_RS08320 PF01202 Shikimate kinase ACIB15232_RS08330 PF01618 MotA/TolQ/ExbB proton channel family ACIB15232_RS08335 PF02472 Biopolymer transport protein ExbD/TolR ACIB15232_RS08340 PF01116 Fructose-bisphosphate aldolase class-II ACIB15232_RS08345 PF00639 PPIC-type PPIASE domain ACIB15232_RS08350 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS08350 PF00072 Response regulator receiver domain ACIB15232_RS08355 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS08360 PF13380 CoA binding domain ACIB15232_RS08375 PF00312 Ribosomal protein S15 ACIB15232_RS08380 PF06463 Molybdenum Cofactor Synthesis C ACIB15232_RS08380 PF04055 Radical SAM superfamily ACIB15232_RS08385 PF00591 Glycosyl transferase family, a/b domain ACIB15232_RS08385 PF02885 Glycosyl transferase family, helical bundle domain ACIB15232_RS08390 PF02371 Transposase IS116/IS110/IS902 family ACIB15232_RS08390 PF01548 Transposase ACIB15232_RS08405 PF00384 Molybdopterin oxidoreductase ACIB15232_RS08405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACIB15232_RS08405 PF01568 Molydopterin dinucleotide binding domain ACIB15232_RS08405 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACIB15232_RS08410 PF12800 4Fe-4S binding domain ACIB15232_RS08410 PF12838 4Fe-4S dicluster domain ACIB15232_RS08415 PF00037 4Fe-4S binding domain ACIB15232_RS08415 PF12801 4Fe-4S binding domain ACIB15232_RS08420 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ACIB15232_RS08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS08440 PF08447 PAS fold ACIB15232_RS08445 PF00563 EAL domain ACIB15232_RS08445 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS08445 PF08448 PAS fold ACIB15232_RS08460 PF02403 Seryl-tRNA synthetase N-terminal domain ACIB15232_RS08460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACIB15232_RS08465 PF00579 tRNA synthetases class I (W and Y) ACIB15232_RS08470 PF06977 SdiA-regulated ACIB15232_RS08480 PF01634 ATP phosphoribosyltransferase ACIB15232_RS08485 PF03309 Type III pantothenate kinase ACIB15232_RS08495 PF06738 Putative threonine/serine exporter ACIB15232_RS08495 PF12821 Threonine/Serine exporter, ThrE ACIB15232_RS08500 PF12821 Threonine/Serine exporter, ThrE ACIB15232_RS08500 PF06738 Putative threonine/serine exporter ACIB15232_RS08505 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ACIB15232_RS08510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACIB15232_RS08515 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACIB15232_RS08520 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACIB15232_RS08520 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACIB15232_RS08530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACIB15232_RS08530 PF10531 SLBB domain ACIB15232_RS08530 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACIB15232_RS08535 PF00285 Citrate synthase, C-terminal domain ACIB15232_RS08540 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACIB15232_RS08540 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ACIB15232_RS08540 PF00384 Molybdopterin oxidoreductase ACIB15232_RS08545 PF00146 NADH dehydrogenase ACIB15232_RS08550 PF12838 4Fe-4S dicluster domain ACIB15232_RS08555 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACIB15232_RS08560 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACIB15232_RS08565 PF00361 Proton-conducting membrane transporter ACIB15232_RS08565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACIB15232_RS08570 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACIB15232_RS08570 PF00361 Proton-conducting membrane transporter ACIB15232_RS08575 PF00361 Proton-conducting membrane transporter ACIB15232_RS08580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACIB15232_RS08585 PF02910 Fumarate reductase flavoprotein C-term ACIB15232_RS08585 PF00890 FAD binding domain ACIB15232_RS08590 PF13085 2Fe-2S iron-sulfur cluster binding domain ACIB15232_RS08590 PF13183 4Fe-4S dicluster domain ACIB15232_RS08595 PF00350 Dynamin family ACIB15232_RS08600 PF00350 Dynamin family ACIB15232_RS08605 PF08274 PhnA Zinc-Ribbon ACIB15232_RS08605 PF03831 PhnA domain ACIB15232_RS08630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACIB15232_RS08630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACIB15232_RS08645 PF00285 Citrate synthase, C-terminal domain ACIB15232_RS08650 PF00694 Aconitase C-terminal domain ACIB15232_RS08650 PF00330 Aconitase family (aconitate hydratase) ACIB15232_RS08655 PF04303 PrpF protein ACIB15232_RS08660 PF00857 Isochorismatase family ACIB15232_RS08665 PF03900 Porphobilinogen deaminase, C-terminal domain ACIB15232_RS08665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACIB15232_RS08675 PF12170 DNA polymerase III tau subunit V interacting with alpha ACIB15232_RS08675 PF12169 DNA polymerase III subunits gamma and tau domain III ACIB15232_RS08680 PF01177 Asp/Glu/Hydantoin racemase ACIB15232_RS08685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACIB15232_RS08685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACIB15232_RS08690 PF07497 Rho termination factor, RNA-binding domain ACIB15232_RS08690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACIB15232_RS08690 PF07498 Rho termination factor, N-terminal domain ACIB15232_RS08695 PF00578 AhpC/TSA family ACIB15232_RS08695 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACIB15232_RS08705 PF00334 Nucleoside diphosphate kinase ACIB15232_RS08715 PF01783 Ribosomal L32p protein family ACIB15232_RS08720 PF02504 Fatty acid synthesis protein ACIB15232_RS08725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACIB15232_RS08725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACIB15232_RS08745 PF00425 chorismate binding enzyme ACIB15232_RS08750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACIB15232_RS08750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACIB15232_RS08760 PF05538 Campylobacter major outer membrane protein ACIB15232_RS08765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACIB15232_RS08765 PF02154 Flagellar motor switch protein FliM ACIB15232_RS08770 PF02119 Flagellar P-ring protein ACIB15232_RS08780 PF01313 Bacterial export proteins, family 3 ACIB15232_RS08805 PF02107 Flagellar L-ring protein ACIB15232_RS08815 PF07196 Flagellin hook IN motif ACIB15232_RS08815 PF07195 Flagellar hook-associated protein 2 C-terminus ACIB15232_RS08815 PF02465 Flagellar hook-associated protein 2 N-terminus ACIB15232_RS08820 PF02561 Flagellar protein FliS ACIB15232_RS08830 PF04055 Radical SAM superfamily ACIB15232_RS08840 PF00484 Carbonic anhydrase ACIB15232_RS08845 PF00155 Aminotransferase class I and II ACIB15232_RS08855 PF02021 Uncharacterised protein family UPF0102 ACIB15232_RS08870 PF00691 OmpA family ACIB15232_RS08870 PF00223 Photosystem I psaA/psaB protein ACIB15232_RS08880 PF00391 PEP-utilising enzyme, mobile domain ACIB15232_RS08880 PF00224 Pyruvate kinase, barrel domain ACIB15232_RS08880 PF02887 Pyruvate kinase, alpha/beta domain ACIB15232_RS08890 PF01975 Survival protein SurE ACIB15232_RS08895 PF02811 PHP domain ACIB15232_RS08895 PF14579 Helix-hairpin-helix motif ACIB15232_RS08895 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACIB15232_RS08895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACIB15232_RS08915 PF01368 DHH family ACIB15232_RS08915 PF02272 DHHA1 domain ACIB15232_RS08915 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ACIB15232_RS08915 PF17768 RecJ OB domain ACIB15232_RS08920 PF06418 CTP synthase N-terminus ACIB15232_RS08920 PF00117 Glutamine amidotransferase class-I ACIB15232_RS08925 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ACIB15232_RS08925 PF12801 4Fe-4S binding domain ACIB15232_RS08925 PF13746 4Fe-4S dicluster domain ACIB15232_RS08935 PF00202 Aminotransferase class-III ACIB15232_RS08945 PF02660 Glycerol-3-phosphate acyltransferase ACIB15232_RS08950 PF02445 Quinolinate synthetase A protein ACIB15232_RS08955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACIB15232_RS08955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACIB15232_RS08960 PF02272 DHHA1 domain ACIB15232_RS08960 PF01368 DHH family ACIB15232_RS08970 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACIB15232_RS08980 PF08544 GHMP kinases C terminal ACIB15232_RS08980 PF00288 GHMP kinases N terminal domain ACIB15232_RS08990 PF04760 Translation initiation factor IF-2, N-terminal region ACIB15232_RS08990 PF11987 Translation-initiation factor 2 ACIB15232_RS08990 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS08995 PF02033 Ribosome-binding factor A ACIB15232_RS09000 PF02576 RimP N-terminal domain ACIB15232_RS09005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACIB15232_RS09005 PF01872 RibD C-terminal domain ACIB15232_RS09015 PF04028 Domain of unknown function (DUF374) ACIB15232_RS09020 PF04055 Radical SAM superfamily ACIB15232_RS09020 PF00919 Uncharacterized protein family UPF0004 ACIB15232_RS09020 PF01938 TRAM domain ACIB15232_RS09030 PF08529 NusA N-terminal domain ACIB15232_RS09030 PF13184 NusA-like KH domain ACIB15232_RS09035 PF09190 DALR domain ACIB15232_RS09035 PF01406 tRNA synthetases class I (C) catalytic domain ACIB15232_RS09040 PF01084 Ribosomal protein S18 ACIB15232_RS09045 PF00436 Single-strand binding protein family ACIB15232_RS09050 PF01250 Ribosomal protein S6 ACIB15232_RS09065 PF00575 S1 RNA binding domain ACIB15232_RS09065 PF00773 RNB domain ACIB15232_RS09065 PF08206 Ribonuclease B OB domain ACIB15232_RS09065 PF08461 Ribonuclease R winged-helix domain ACIB15232_RS09065 PF17876 Cold shock domain ACIB15232_RS09070 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACIB15232_RS09070 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACIB15232_RS09085 PF08245 Mur ligase middle domain ACIB15232_RS09085 PF01225 Mur ligase family, catalytic domain ACIB15232_RS09085 PF02875 Mur ligase family, glutamate ligase domain ACIB15232_RS09100 PF01702 Queuine tRNA-ribosyltransferase ACIB15232_RS09105 PF02686 Glu-tRNAGln amidotransferase C subunit ACIB15232_RS09110 PF03960 ArsC family ACIB15232_RS09115 PF03502 Nucleoside-specific channel-forming protein, Tsx ACIB15232_RS09120 PF01474 Class-II DAHP synthetase family ACIB15232_RS09125 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACIB15232_RS09140 PF03652 Holliday junction resolvase ACIB15232_RS09155 PF01648 4'-phosphopantetheinyl transferase superfamily ACIB15232_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS09165 PF02569 Pantoate-beta-alanine ligase ACIB15232_RS09175 PF00919 Uncharacterized protein family UPF0004 ACIB15232_RS09175 PF18693 TRAM domain ACIB15232_RS09175 PF04055 Radical SAM superfamily ACIB15232_RS09180 PF01171 PP-loop family ACIB15232_RS09190 PF00543 Nitrogen regulatory protein P-II ACIB15232_RS09205 PF01966 HD domain ACIB15232_RS09205 PF08335 GlnD PII-uridylyltransferase ACIB15232_RS09210 PF01553 Acyltransferase ACIB15232_RS09210 PF00501 AMP-binding enzyme ACIB15232_RS09215 PF00375 Sodium:dicarboxylate symporter family ACIB15232_RS09245 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACIB15232_RS09250 PF02040 Arsenical pump membrane protein ACIB15232_RS09260 PF02374 Anion-transporting ATPase ACIB15232_RS09265 PF06953 Arsenical resistance operon trans-acting repressor ArsD ACIB15232_RS09270 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACIB15232_RS09280 PF00456 Transketolase, thiamine diphosphate binding domain ACIB15232_RS09280 PF02780 Transketolase, C-terminal domain ACIB15232_RS09280 PF02779 Transketolase, pyrimidine binding domain ACIB15232_RS09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS09285 PF00989 PAS fold ACIB15232_RS09285 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS09295 PF13533 Biotin-lipoyl like ACIB15232_RS09300 PF00664 ABC transporter transmembrane region ACIB15232_RS09300 PF03412 Peptidase C39 family ACIB15232_RS09300 PF00005 ABC transporter ACIB15232_RS09315 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS09315 PF00072 Response regulator receiver domain ACIB15232_RS09320 PF08448 PAS fold ACIB15232_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS09320 PF08447 PAS fold ACIB15232_RS09330 PF02203 Tar ligand binding domain homologue ACIB15232_RS09330 PF00672 HAMP domain ACIB15232_RS09330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS09335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACIB15232_RS09350 PF00364 Biotin-requiring enzyme ACIB15232_RS09385 PF05690 Thiazole biosynthesis protein ThiG ACIB15232_RS09395 PF03853 YjeF-related protein N-terminus ACIB15232_RS09395 PF01256 Carbohydrate kinase ACIB15232_RS09405 PF00814 Glycoprotease family ACIB15232_RS09420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACIB15232_RS09420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACIB15232_RS09420 PF13288 DXP reductoisomerase C-terminal domain ACIB15232_RS09450 PF03129 Anticodon binding domain ACIB15232_RS09450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACIB15232_RS09450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACIB15232_RS09455 PF00707 Translation initiation factor IF-3, C-terminal domain ACIB15232_RS09455 PF05198 Translation initiation factor IF-3, N-terminal domain ACIB15232_RS09460 PF01632 Ribosomal protein L35 ACIB15232_RS09465 PF00453 Ribosomal protein L20 ACIB15232_RS09480 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACIB15232_RS09485 PF12804 MobA-like NTP transferase domain ACIB15232_RS09490 PF00330 Aconitase family (aconitate hydratase) ACIB15232_RS09495 PF01252 Signal peptidase (SPase) II ACIB15232_RS09500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACIB15232_RS09500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACIB15232_RS09500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACIB15232_RS09500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACIB15232_RS09505 PF01649 Ribosomal protein S20 ACIB15232_RS09510 PF00472 RF-1 domain ACIB15232_RS09510 PF03462 PCRF domain ACIB15232_RS09515 PF12849 PBP superfamily domain ACIB15232_RS09520 PF12792 CSS motif domain associated with EAL ACIB15232_RS09520 PF00563 EAL domain ACIB15232_RS09525 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS09530 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS09535 PF00005 ABC transporter ACIB15232_RS09540 PF01895 PhoU domain ACIB15232_RS09550 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS09550 PF00072 Response regulator receiver domain ACIB15232_RS09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS09555 PF13493 Domain of unknown function (DUF4118) ACIB15232_RS09555 PF02702 Osmosensitive K+ channel His kinase sensor domain ACIB15232_RS09555 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS09560 PF00572 Ribosomal protein L13 ACIB15232_RS09565 PF00380 Ribosomal protein S9/S16 ACIB15232_RS09575 PF03070 TENA/THI-4/PQQC family ACIB15232_RS09580 PF02110 Hydroxyethylthiazole kinase family ACIB15232_RS09585 PF08543 Phosphomethylpyrimidine kinase ACIB15232_RS09585 PF02581 Thiamine monophosphate synthase ACIB15232_RS09590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACIB15232_RS09595 PF13419 Haloacid dehalogenase-like hydrolase ACIB15232_RS09615 PF09383 NIL domain ACIB15232_RS09615 PF00005 ABC transporter ACIB15232_RS09620 PF02405 Permease MlaE ACIB15232_RS09625 PF02664 S-Ribosylhomocysteinase (LuxS) ACIB15232_RS09635 PF07943 Penicillin-binding protein 5, C-terminal domain ACIB15232_RS09635 PF00768 D-alanyl-D-alanine carboxypeptidase ACIB15232_RS09645 PF00117 Glutamine amidotransferase class-I ACIB15232_RS09645 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACIB15232_RS09655 PF00709 Adenylosuccinate synthetase ACIB15232_RS09660 PF13393 Histidyl-tRNA synthetase ACIB15232_RS09665 PF00266 Aminotransferase class-V ACIB15232_RS09680 PF04264 YceI-like domain ACIB15232_RS09695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACIB15232_RS09695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACIB15232_RS09700 PF03447 Homoserine dehydrogenase, NAD binding domain ACIB15232_RS09700 PF00742 Homoserine dehydrogenase ACIB15232_RS09700 PF01842 ACT domain ACIB15232_RS09705 PF00155 Aminotransferase class I and II ACIB15232_RS09715 PF00588 SpoU rRNA Methylase family ACIB15232_RS09715 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACIB15232_RS09720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACIB15232_RS09725 PF01197 Ribosomal protein L31 ACIB15232_RS09765 PF00589 Phage integrase family ACIB15232_RS09765 PF02899 Phage integrase, N-terminal SAM-like domain ACIB15232_RS09770 PF01380 SIS domain ACIB15232_RS09775 PF02719 Polysaccharide biosynthesis protein ACIB15232_RS09780 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACIB15232_RS09785 PF00953 Glycosyl transferase family 4 ACIB15232_RS09800 PF02350 UDP-N-acetylglucosamine 2-epimerase ACIB15232_RS09805 PF01370 NAD dependent epimerase/dehydratase family ACIB15232_RS09810 PF08485 Polysaccharide biosynthesis protein C-terminal ACIB15232_RS09810 PF02719 Polysaccharide biosynthesis protein ACIB15232_RS09815 PF00977 Histidine biosynthesis protein ACIB15232_RS09820 PF00117 Glutamine amidotransferase class-I ACIB15232_RS09840 PF02350 UDP-N-acetylglucosamine 2-epimerase ACIB15232_RS09850 PF01757 Acyltransferase family ACIB15232_RS09860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACIB15232_RS09865 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS09870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACIB15232_RS09870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACIB15232_RS09875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACIB15232_RS09875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACIB15232_RS09875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACIB15232_RS09920 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ACIB15232_RS09950 PF04335 VirB8 protein ACIB15232_RS09960 PF03743 Bacterial conjugation TrbI-like protein ACIB15232_RS09965 PF00437 Type II/IV secretion system protein ACIB15232_RS09970 PF02534 Type IV secretory system Conjugative DNA transfer ACIB15232_RS09995 PF13362 Toprim domain ACIB15232_RS09995 PF18818 Metallopeptidase superfamily domain ACIB15232_RS09995 PF08401 Domain of unknown function (DUF1738) ACIB15232_RS10030 PF13657 HipA N-terminal domain ACIB15232_RS10030 PF07804 HipA-like C-terminal domain ACIB15232_RS10045 PF01348 Type II intron maturase ACIB15232_RS10045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ACIB15232_RS10055 PF12344 Ultra-violet resistance protein B ACIB15232_RS10055 PF17757 UvrB interaction domain ACIB15232_RS10055 PF02151 UvrB/uvrC motif ACIB15232_RS10055 PF04851 Type III restriction enzyme, res subunit ACIB15232_RS10055 PF00271 Helicase conserved C-terminal domain ACIB15232_RS10075 PF00171 Aldehyde dehydrogenase family ACIB15232_RS10080 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS10080 PF00239 Resolvase, N terminal domain ACIB15232_RS10105 PF00665 Integrase core domain ACIB15232_RS10170 PF00437 Type II/IV secretion system protein ACIB15232_RS10205 PF01121 Dephospho-CoA kinase ACIB15232_RS10210 PF02769 AIR synthase related protein, C-terminal domain ACIB15232_RS10210 PF00586 AIR synthase related protein, N-terminal domain ACIB15232_RS10215 PF08448 PAS fold ACIB15232_RS10215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS10215 PF08447 PAS fold ACIB15232_RS10225 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACIB15232_RS10225 PF00809 Pterin binding enzyme ACIB15232_RS10225 PF02310 B12 binding domain ACIB15232_RS10225 PF02574 Homocysteine S-methyltransferase ACIB15232_RS10225 PF02607 B12 binding domain ACIB15232_RS10235 PF01297 Zinc-uptake complex component A periplasmic ACIB15232_RS10240 PF00005 ABC transporter ACIB15232_RS10245 PF00950 ABC 3 transport family ACIB15232_RS10255 PF01063 Amino-transferase class IV ACIB15232_RS10270 PF01502 Phosphoribosyl-AMP cyclohydrolase ACIB15232_RS10270 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACIB15232_RS10280 PF01883 Iron-sulfur cluster assembly protein ACIB15232_RS10280 PF10609 NUBPL iron-transfer P-loop NTPase ACIB15232_RS10295 PF02542 YgbB family ACIB15232_RS10295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACIB15232_RS10300 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS10300 PF00072 Response regulator receiver domain ACIB15232_RS10305 PF04608 Phosphatidylglycerophosphatase A ACIB15232_RS10310 PF04264 YceI-like domain ACIB15232_RS10315 PF00873 AcrB/AcrD/AcrF family ACIB15232_RS10335 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS10335 PF00072 Response regulator receiver domain ACIB15232_RS10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS10345 PF00072 Response regulator receiver domain ACIB15232_RS10345 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS10350 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ACIB15232_RS10355 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACIB15232_RS10360 PF04055 Radical SAM superfamily ACIB15232_RS10375 PF00977 Histidine biosynthesis protein ACIB15232_RS10380 PF00398 Ribosomal RNA adenine dimethylase ACIB15232_RS10385 PF00753 Metallo-beta-lactamase superfamily ACIB15232_RS10385 PF17770 Ribonuclease J C-terminal domain ACIB15232_RS10385 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ACIB15232_RS10390 PF01380 SIS domain ACIB15232_RS10390 PF00571 CBS domain ACIB15232_RS10395 PF01479 S4 domain ACIB15232_RS10395 PF00849 RNA pseudouridylate synthase ACIB15232_RS10400 PF16193 AAA C-terminal domain ACIB15232_RS10400 PF01661 Macro domain ACIB15232_RS10400 PF12002 MgsA AAA+ ATPase C terminal ACIB15232_RS10400 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACIB15232_RS10405 PF03653 Uncharacterised protein family (UPF0093) ACIB15232_RS10410 PF13638 PIN domain ACIB15232_RS10410 PF02562 PhoH-like protein ACIB15232_RS10420 PF13537 Glutamine amidotransferase domain ACIB15232_RS10420 PF00733 Asparagine synthase ACIB15232_RS10430 PF01384 Phosphate transporter family ACIB15232_RS10435 PF00270 DEAD/DEAH box helicase ACIB15232_RS10435 PF00271 Helicase conserved C-terminal domain ACIB15232_RS10440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACIB15232_RS10440 PF00289 Biotin carboxylase, N-terminal domain ACIB15232_RS10440 PF02785 Biotin carboxylase C-terminal domain ACIB15232_RS10445 PF00364 Biotin-requiring enzyme ACIB15232_RS10450 PF01872 RibD C-terminal domain ACIB15232_RS10450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACIB15232_RS10460 PF02637 GatB domain ACIB15232_RS10460 PF02934 GatB/GatE catalytic domain ACIB15232_RS10465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACIB15232_RS10465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACIB15232_RS10470 PF08240 Alcohol dehydrogenase GroES-like domain ACIB15232_RS10470 PF00107 Zinc-binding dehydrogenase ACIB15232_RS10480 PF05736 OprF membrane domain ACIB15232_RS10480 PF00691 OmpA family ACIB15232_RS10485 PF00268 Ribonucleotide reductase, small chain ACIB15232_RS10490 PF00317 Ribonucleotide reductase, all-alpha domain ACIB15232_RS10490 PF03477 ATP cone domain ACIB15232_RS10490 PF02867 Ribonucleotide reductase, barrel domain ACIB15232_RS10495 PF00206 Lyase ACIB15232_RS10495 PF10397 Adenylosuccinate lyase C-terminus ACIB15232_RS10500 PF00849 RNA pseudouridylate synthase ACIB15232_RS10510 PF03458 UPF0126 domain ACIB15232_RS10515 PF02511 Thymidylate synthase complementing protein ACIB15232_RS10530 PF00072 Response regulator receiver domain ACIB15232_RS10530 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS10565 PF00884 Sulfatase ACIB15232_RS10565 PF08019 Phosphoethanolamine transferase EptA/EptB ACIB15232_RS10570 PF01206 Sulfurtransferase TusA ACIB15232_RS10575 PF02371 Transposase IS116/IS110/IS902 family ACIB15232_RS10575 PF01548 Transposase ACIB15232_RS10580 PF04143 Sulphur transport ACIB15232_RS10585 PF03144 Elongation factor Tu domain 2 ACIB15232_RS10585 PF00679 Elongation factor G C-terminus ACIB15232_RS10585 PF00009 Elongation factor Tu GTP binding domain ACIB15232_RS10590 PF02082 Transcriptional regulator ACIB15232_RS10595 PF00563 EAL domain ACIB15232_RS10595 PF08495 FIST N domain ACIB15232_RS10595 PF10442 FIST C domain ACIB15232_RS10595 PF00990 Diguanylate cyclase, GGDEF domain ACIB15232_RS10600 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS10605 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS10610 PF12857 TOBE-like domain ACIB15232_RS10610 PF17850 CysA C-terminal regulatory domain ACIB15232_RS10610 PF00005 ABC transporter ACIB15232_RS10620 PF00149 Calcineurin-like phosphoesterase ACIB15232_RS10625 PF00266 Aminotransferase class-V ACIB15232_RS10635 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS10640 PF00551 Formyl transferase ACIB15232_RS10640 PF02911 Formyl transferase, C-terminal domain ACIB15232_RS10645 PF02075 Crossover junction endodeoxyribonuclease RuvC ACIB15232_RS10670 PF03796 DnaB-like helicase C terminal domain ACIB15232_RS10670 PF00772 DnaB-like helicase N terminal domain ACIB15232_RS10680 PF02195 ParB-like nuclease domain ACIB15232_RS10685 PF13614 AAA domain ACIB15232_RS10690 PF09382 RQC domain ACIB15232_RS10690 PF00270 DEAD/DEAH box helicase ACIB15232_RS10690 PF00570 HRDC domain ACIB15232_RS10690 PF16124 RecQ zinc-binding ACIB15232_RS10690 PF00271 Helicase conserved C-terminal domain ACIB15232_RS10750 PF00665 Integrase core domain ACIB15232_RS10755 PF00011 Hsp20/alpha crystallin family ACIB15232_RS10760 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS10760 PF00072 Response regulator receiver domain ACIB15232_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS10765 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS10765 PF00989 PAS fold ACIB15232_RS10765 PF08447 PAS fold ACIB15232_RS10825 PF01548 Transposase ACIB15232_RS10825 PF02371 Transposase IS116/IS110/IS902 family ACIB15232_RS10830 PF05656 Protein of unknown function (DUF805) ACIB15232_RS10880 PF12419 SNF2 Helicase protein ACIB15232_RS10880 PF00271 Helicase conserved C-terminal domain ACIB15232_RS10880 PF00176 SNF2 family N-terminal domain ACIB15232_RS10885 PF09084 NMT1/THI5 like ACIB15232_RS10890 PF00296 Luciferase-like monooxygenase ACIB15232_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS10900 PF00005 ABC transporter ACIB15232_RS10915 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACIB15232_RS10920 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS10925 PF00528 Binding-protein-dependent transport system inner membrane component ACIB15232_RS10930 PF00005 ABC transporter ACIB15232_RS10940 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS10950 PF02371 Transposase IS116/IS110/IS902 family ACIB15232_RS10950 PF01548 Transposase ACIB15232_RS10955 PF02597 ThiS family ACIB15232_RS10980 PF00266 Aminotransferase class-V ACIB15232_RS10985 PF00132 Bacterial transferase hexapeptide (six repeats) ACIB15232_RS10985 PF06426 Serine acetyltransferase, N-terminal ACIB15232_RS10995 PF00291 Pyridoxal-phosphate dependent enzyme ACIB15232_RS11000 PF02203 Tar ligand binding domain homologue ACIB15232_RS11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11000 PF00672 HAMP domain ACIB15232_RS11005 PF08447 PAS fold ACIB15232_RS11005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11025 PF00672 HAMP domain ACIB15232_RS11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11025 PF02203 Tar ligand binding domain homologue ACIB15232_RS11040 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACIB15232_RS11050 PF00672 HAMP domain ACIB15232_RS11050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11050 PF02203 Tar ligand binding domain homologue ACIB15232_RS11055 PF02535 ZIP Zinc transporter ACIB15232_RS11060 PF00593 TonB dependent receptor ACIB15232_RS11060 PF07715 TonB-dependent Receptor Plug Domain ACIB15232_RS11080 PF00011 Hsp20/alpha crystallin family ACIB15232_RS11085 PF02661 Fic/DOC family ACIB15232_RS11095 PF18644 Phage integrase SAM-like domain ACIB15232_RS11095 PF00589 Phage integrase family ACIB15232_RS11100 PF09962 Uncharacterized conserved protein (DUF2196) ACIB15232_RS11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS11105 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS11105 PF00989 PAS fold ACIB15232_RS11105 PF08447 PAS fold ACIB15232_RS11110 PF01348 Type II intron maturase ACIB15232_RS11110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ACIB15232_RS11125 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ACIB15232_RS11130 PF00313 'Cold-shock' DNA-binding domain ACIB15232_RS11155 PF00665 Integrase core domain ACIB15232_RS11220 PF01527 Transposase ACIB15232_RS11225 PF00589 Phage integrase family ACIB15232_RS11225 PF02899 Phage integrase, N-terminal SAM-like domain ACIB15232_RS11230 PF09962 Uncharacterized conserved protein (DUF2196) ACIB15232_RS11235 PF17758 Proteasomal ATPase OB N-terminal domain ACIB15232_RS11235 PF00004 ATPase family associated with various cellular activities (AAA) ACIB15232_RS11235 PF16450 Proteasomal ATPase OB C-terminal domain ACIB15232_RS11290 PF02146 Sir2 family ACIB15232_RS11315 PF00580 UvrD/REP helicase N-terminal domain ACIB15232_RS11315 PF13361 UvrD-like helicase C-terminal domain ACIB15232_RS11315 PF12705 PD-(D/E)XK nuclease superfamily ACIB15232_RS11320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ACIB15232_RS11320 PF01348 Type II intron maturase ACIB15232_RS11325 PF01526 Tn3 transposase DDE domain ACIB15232_RS11325 PF13700 Domain of unknown function (DUF4158) ACIB15232_RS11330 PF00239 Resolvase, N terminal domain ACIB15232_RS11330 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS11345 PF16226 Domain of unknown function (DUF4885) ACIB15232_RS11350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ACIB15232_RS11350 PF01348 Type II intron maturase ACIB15232_RS11365 PF00216 Bacterial DNA-binding protein ACIB15232_RS11370 PF02899 Phage integrase, N-terminal SAM-like domain ACIB15232_RS11370 PF00589 Phage integrase family ACIB15232_RS11430 PF06986 Type-1V conjugative transfer system mating pair stabilisation ACIB15232_RS11435 PF01464 Transglycosylase SLT domain ACIB15232_RS11450 PF03743 Bacterial conjugation TrbI-like protein ACIB15232_RS11505 PF00580 UvrD/REP helicase N-terminal domain ACIB15232_RS11505 PF13361 UvrD-like helicase C-terminal domain ACIB15232_RS11530 PF00817 impB/mucB/samB family ACIB15232_RS11530 PF11799 impB/mucB/samB family C-terminal domain ACIB15232_RS11545 PF01719 Plasmid replication protein ACIB15232_RS11550 PF07690 Major Facilitator Superfamily ACIB15232_RS11555 PF01076 Plasmid recombination enzyme ACIB15232_RS11650 PF02311 AraC-like ligand binding domain ACIB15232_RS11650 PF12833 Helix-turn-helix domain ACIB15232_RS11660 PF02796 Helix-turn-helix domain of resolvase ACIB15232_RS11660 PF00239 Resolvase, N terminal domain ACIB15232_RS11665 PF07715 TonB-dependent Receptor Plug Domain ACIB15232_RS11665 PF00593 TonB dependent receptor ACIB15232_RS11665 PF07660 Secretin and TonB N terminus short domain ACIB15232_RS11675 PF04076 Bacterial OB fold (BOF) protein ACIB15232_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACIB15232_RS11680 PF00512 His Kinase A (phospho-acceptor) domain ACIB15232_RS11680 PF08521 Two-component sensor kinase N-terminal ACIB15232_RS11695 PF00072 Response regulator receiver domain ACIB15232_RS11695 PF00486 Transcriptional regulatory protein, C terminal ACIB15232_RS11740 PF04231 Endonuclease I ACIB15232_RS11760 PF00872 Transposase, Mutator family ACIB15232_RS11765 PF00085 Thioredoxin ACIB15232_RS11770 PF00578 AhpC/TSA family ACIB15232_RS11770 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACIB15232_RS11775 PF00141 Peroxidase ACIB15232_RS11780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11780 PF08447 PAS fold ACIB15232_RS11785 PF02203 Tar ligand binding domain homologue ACIB15232_RS11785 PF00672 HAMP domain ACIB15232_RS11785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACIB15232_RS11795 PF09905 DNA-binding protein VF530