locus-tag class description ACLO_RS00005 PF11638 DnaA N-terminal domain ACLO_RS00005 PF00308 Bacterial dnaA protein ACLO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ACLO_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACLO_RS00010 PF02767 DNA polymerase III beta subunit, central domain ACLO_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACLO_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS00015 PF00204 DNA gyrase B ACLO_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ACLO_RS00015 PF01751 Toprim domain ACLO_RS00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS00025 PF14489 QueF-like protein ACLO_RS00040 PF06779 Uncharacterised MFS-type transporter YbfB ACLO_RS00045 PF00849 RNA pseudouridylate synthase ACLO_RS00050 PF00206 Lyase ACLO_RS00050 PF10397 Adenylosuccinate lyase C-terminus ACLO_RS00055 PF02867 Ribonucleotide reductase, barrel domain ACLO_RS00055 PF00317 Ribonucleotide reductase, all-alpha domain ACLO_RS00055 PF03477 ATP cone domain ACLO_RS00060 PF00268 Ribonucleotide reductase, small chain ACLO_RS00070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACLO_RS00085 PF01928 CYTH domain ACLO_RS00090 PF03063 Prismane/CO dehydrogenase family ACLO_RS00100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACLO_RS00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS00110 PF00318 Ribosomal protein S2 ACLO_RS00115 PF00107 Zinc-binding dehydrogenase ACLO_RS00115 PF08240 Alcohol dehydrogenase GroES-like domain ACLO_RS00125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACLO_RS00125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACLO_RS00130 PF02637 GatB domain ACLO_RS00130 PF02934 GatB/GatE catalytic domain ACLO_RS00135 PF09312 SurA N-terminal domain ACLO_RS00135 PF00639 PPIC-type PPIASE domain ACLO_RS00145 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS00145 PF00072 Response regulator receiver domain ACLO_RS00150 PF08447 PAS fold ACLO_RS00150 PF00989 PAS fold ACLO_RS00150 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS00155 PF02589 LUD domain ACLO_RS00160 PF13183 4Fe-4S dicluster domain ACLO_RS00160 PF11870 Domain of unknown function (DUF3390) ACLO_RS00160 PF02589 LUD domain ACLO_RS00165 PF02754 Cysteine-rich domain ACLO_RS00175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACLO_RS00180 PF00364 Biotin-requiring enzyme ACLO_RS00185 PF00289 Biotin carboxylase, N-terminal domain ACLO_RS00185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACLO_RS00185 PF02785 Biotin carboxylase C-terminal domain ACLO_RS00190 PF00270 DEAD/DEAH box helicase ACLO_RS00190 PF00271 Helicase conserved C-terminal domain ACLO_RS00195 PF01384 Phosphate transporter family ACLO_RS00205 PF00733 Asparagine synthase ACLO_RS00205 PF13537 Glutamine amidotransferase domain ACLO_RS00215 PF00881 Nitroreductase family ACLO_RS00220 PF13085 2Fe-2S iron-sulfur cluster binding domain ACLO_RS00225 PF02910 Fumarate reductase flavoprotein C-term ACLO_RS00225 PF00890 FAD binding domain ACLO_RS00235 PF02562 PhoH-like protein ACLO_RS00235 PF13638 PIN domain ACLO_RS00245 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACLO_RS00245 PF12002 MgsA AAA+ ATPase C terminal ACLO_RS00245 PF01661 Macro domain ACLO_RS00245 PF16193 AAA C-terminal domain ACLO_RS00250 PF01479 S4 domain ACLO_RS00250 PF00849 RNA pseudouridylate synthase ACLO_RS00255 PF00571 CBS domain ACLO_RS00255 PF01380 SIS domain ACLO_RS00260 PF17770 Ribonuclease J C-terminal domain ACLO_RS00260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ACLO_RS00260 PF00753 Metallo-beta-lactamase superfamily ACLO_RS00265 PF00398 Ribosomal RNA adenine dimethylase ACLO_RS00270 PF00977 Histidine biosynthesis protein ACLO_RS00285 PF04055 Radical SAM superfamily ACLO_RS00290 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACLO_RS00295 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ACLO_RS00300 PF00072 Response regulator receiver domain ACLO_RS00300 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS00305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS00310 PF08448 PAS fold ACLO_RS00310 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS00330 PF00873 AcrB/AcrD/AcrF family ACLO_RS00335 PF04264 YceI-like domain ACLO_RS00345 PF01554 MatE ACLO_RS00350 PF00742 Homoserine dehydrogenase ACLO_RS00350 PF03447 Homoserine dehydrogenase, NAD binding domain ACLO_RS00350 PF01842 ACT domain ACLO_RS00355 PF00155 Aminotransferase class I and II ACLO_RS00365 PF00588 SpoU rRNA Methylase family ACLO_RS00365 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACLO_RS00370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACLO_RS00375 PF01197 Ribosomal protein L31 ACLO_RS00425 PF01695 IstB-like ATP binding protein ACLO_RS00490 PF00437 Type II/IV secretion system protein ACLO_RS00495 PF00437 Type II/IV secretion system protein ACLO_RS00525 PF02222 ATP-grasp domain ACLO_RS00530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACLO_RS00530 PF10135 Rod binding protein ACLO_RS00535 PF01678 Diaminopimelate epimerase ACLO_RS00540 PF01121 Dephospho-CoA kinase ACLO_RS00545 PF17284 Spermidine synthase tetramerisation domain ACLO_RS00550 PF02769 AIR synthase related protein, C-terminal domain ACLO_RS00550 PF00586 AIR synthase related protein, N-terminal domain ACLO_RS00555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACLO_RS00555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACLO_RS00560 PF17954 Quercetinase C-terminal cupin domain ACLO_RS00560 PF02678 Pirin ACLO_RS00565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACLO_RS00575 PF01047 MarR family ACLO_RS00580 PF00266 Aminotransferase class-V ACLO_RS00585 PF13393 Histidyl-tRNA synthetase ACLO_RS00590 PF00709 Adenylosuccinate synthetase ACLO_RS00600 PF00117 Glutamine amidotransferase class-I ACLO_RS00600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACLO_RS00615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACLO_RS00615 PF02542 YgbB family ACLO_RS00630 PF01964 Radical SAM ThiC family ACLO_RS00635 PF01883 Iron-sulfur cluster assembly protein ACLO_RS00635 PF10609 NUBPL iron-transfer P-loop NTPase ACLO_RS00645 PF01502 Phosphoribosyl-AMP cyclohydrolase ACLO_RS00645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACLO_RS00655 PF01063 Amino-transferase class IV ACLO_RS00665 PF00925 GTP cyclohydrolase II ACLO_RS00670 PF02203 Tar ligand binding domain homologue ACLO_RS00670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS00670 PF00672 HAMP domain ACLO_RS00680 PF02574 Homocysteine S-methyltransferase ACLO_RS00680 PF00809 Pterin binding enzyme ACLO_RS00680 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACLO_RS00680 PF02607 B12 binding domain ACLO_RS00680 PF02310 B12 binding domain ACLO_RS00685 PF00578 AhpC/TSA family ACLO_RS00685 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACLO_RS00700 PF00465 Iron-containing alcohol dehydrogenase ACLO_RS00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS00705 PF00989 PAS fold ACLO_RS00705 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS00705 PF08447 PAS fold ACLO_RS00715 PF00768 D-alanyl-D-alanine carboxypeptidase ACLO_RS00715 PF07943 Penicillin-binding protein 5, C-terminal domain ACLO_RS00730 PF02664 S-Ribosylhomocysteinase (LuxS) ACLO_RS00755 PF07273 Protein of unknown function (DUF1439) ACLO_RS00760 PF02405 Permease MlaE ACLO_RS00765 PF09383 NIL domain ACLO_RS00765 PF00005 ABC transporter ACLO_RS00780 PF05145 Transition state regulatory protein AbrB ACLO_RS00785 PF01638 HxlR-like helix-turn-helix ACLO_RS00790 PF02525 Flavodoxin-like fold ACLO_RS00795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACLO_RS00800 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ACLO_RS00800 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ACLO_RS00810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ACLO_RS00815 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS00820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACLO_RS00825 PF00380 Ribosomal protein S9/S16 ACLO_RS00830 PF00572 Ribosomal protein L13 ACLO_RS00835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS00835 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS00840 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS00840 PF00072 Response regulator receiver domain ACLO_RS00850 PF01895 PhoU domain ACLO_RS00855 PF00005 ABC transporter ACLO_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS00870 PF12849 PBP superfamily domain ACLO_RS00880 PF03462 PCRF domain ACLO_RS00880 PF00472 RF-1 domain ACLO_RS00885 PF01649 Ribosomal protein S20 ACLO_RS00890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACLO_RS00890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACLO_RS00890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACLO_RS00890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACLO_RS00895 PF01252 Signal peptidase (SPase) II ACLO_RS00900 PF00330 Aconitase family (aconitate hydratase) ACLO_RS00905 PF12804 MobA-like NTP transferase domain ACLO_RS00910 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS00920 PF00453 Ribosomal protein L20 ACLO_RS00925 PF01632 Ribosomal protein L35 ACLO_RS00930 PF00707 Translation initiation factor IF-3, C-terminal domain ACLO_RS00930 PF05198 Translation initiation factor IF-3, N-terminal domain ACLO_RS00935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACLO_RS00935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACLO_RS00935 PF03129 Anticodon binding domain ACLO_RS00965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACLO_RS00965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACLO_RS00965 PF13288 DXP reductoisomerase C-terminal domain ACLO_RS00985 PF00814 Glycoprotease family ACLO_RS00990 PF01253 Translation initiation factor SUI1 ACLO_RS00995 PF03853 YjeF-related protein N-terminus ACLO_RS00995 PF01256 Carbohydrate kinase ACLO_RS01000 PF03091 CutA1 divalent ion tolerance protein ACLO_RS01005 PF05690 Thiazole biosynthesis protein ThiG ACLO_RS01060 PF13784 Fic/DOC family N-terminal ACLO_RS01060 PF02661 Fic/DOC family ACLO_RS01070 PF10544 T5orf172 domain ACLO_RS01085 PF01022 Bacterial regulatory protein, arsR family ACLO_RS01090 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS01090 PF00072 Response regulator receiver domain ACLO_RS01100 PF02661 Fic/DOC family ACLO_RS01105 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ACLO_RS01110 PF02796 Helix-turn-helix domain of resolvase ACLO_RS01110 PF00239 Resolvase, N terminal domain ACLO_RS01120 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACLO_RS01125 PF00403 Heavy-metal-associated domain ACLO_RS01135 PF00873 AcrB/AcrD/AcrF family ACLO_RS01155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ACLO_RS01155 PF01348 Type II intron maturase ACLO_RS01160 PF02796 Helix-turn-helix domain of resolvase ACLO_RS01160 PF00239 Resolvase, N terminal domain ACLO_RS01165 PF00578 AhpC/TSA family ACLO_RS01170 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS01170 PF00072 Response regulator receiver domain ACLO_RS01185 PF00072 Response regulator receiver domain ACLO_RS01185 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS01200 PF18719 ArlS sensor domain ACLO_RS01200 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS01220 PF00403 Heavy-metal-associated domain ACLO_RS01235 PF05275 Copper resistance protein B precursor (CopB) ACLO_RS01240 PF07731 Multicopper oxidase ACLO_RS01240 PF07732 Multicopper oxidase ACLO_RS01240 PF00394 Multicopper oxidase ACLO_RS01260 PF03471 Transporter associated domain ACLO_RS01260 PF00571 CBS domain ACLO_RS01265 PF01594 AI-2E family transporter ACLO_RS01270 PF02416 mttA/Hcf106 family ACLO_RS01285 PF02673 Bacitracin resistance protein BacA ACLO_RS01375 PF01695 IstB-like ATP binding protein ACLO_RS01395 PF13173 AAA domain ACLO_RS01395 PF13635 Domain of unknown function (DUF4143) ACLO_RS01425 PF00589 Phage integrase family ACLO_RS01445 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ACLO_RS01450 PF08502 LeuA allosteric (dimerisation) domain ACLO_RS01450 PF00682 HMGL-like ACLO_RS01465 PF01699 Sodium/calcium exchanger protein ACLO_RS01470 PF02203 Tar ligand binding domain homologue ACLO_RS01470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS01470 PF00672 HAMP domain ACLO_RS01485 PF08448 PAS fold ACLO_RS01485 PF08447 PAS fold ACLO_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS01490 PF00072 Response regulator receiver domain ACLO_RS01490 PF02954 Bacterial regulatory protein, Fis family ACLO_RS01490 PF00158 Sigma-54 interaction domain ACLO_RS01500 PF00664 ABC transporter transmembrane region ACLO_RS01500 PF00005 ABC transporter ACLO_RS01500 PF03412 Peptidase C39 family ACLO_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS01515 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS01515 PF00989 PAS fold ACLO_RS01520 PF02779 Transketolase, pyrimidine binding domain ACLO_RS01520 PF02780 Transketolase, C-terminal domain ACLO_RS01520 PF00456 Transketolase, thiamine diphosphate binding domain ACLO_RS01535 PF03788 LrgA family ACLO_RS01540 PF04172 LrgB-like family ACLO_RS01550 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACLO_RS01565 PF00916 Sulfate permease family ACLO_RS01565 PF01740 STAS domain ACLO_RS01570 PF01739 CheR methyltransferase, SAM binding domain ACLO_RS01570 PF03705 CheR methyltransferase, all-alpha domain ACLO_RS01570 PF08448 PAS fold ACLO_RS01570 PF01339 CheB methylesterase ACLO_RS01575 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS01575 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS01575 PF00563 EAL domain ACLO_RS01585 PF01553 Acyltransferase ACLO_RS01585 PF00501 AMP-binding enzyme ACLO_RS01595 PF08335 GlnD PII-uridylyltransferase ACLO_RS01595 PF01966 HD domain ACLO_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS01605 PF00989 PAS fold ACLO_RS01605 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ACLO_RS01605 PF17203 Single cache domain 3 ACLO_RS01620 PF00909 Ammonium Transporter Family ACLO_RS01625 PF00543 Nitrogen regulatory protein P-II ACLO_RS01630 PF00909 Ammonium Transporter Family ACLO_RS01635 PF00543 Nitrogen regulatory protein P-II ACLO_RS01645 PF02154 Flagellar motor switch protein FliM ACLO_RS01645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACLO_RS01650 PF02119 Flagellar P-ring protein ACLO_RS01660 PF01313 Bacterial export proteins, family 3 ACLO_RS01685 PF02107 Flagellar L-ring protein ACLO_RS01690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS01690 PF00460 Flagella basal body rod protein ACLO_RS01695 PF07195 Flagellar hook-associated protein 2 C-terminus ACLO_RS01695 PF02465 Flagellar hook-associated protein 2 N-terminus ACLO_RS01700 PF02561 Flagellar protein FliS ACLO_RS01710 PF01171 PP-loop family ACLO_RS01715 PF18693 TRAM domain ACLO_RS01715 PF00919 Uncharacterized protein family UPF0004 ACLO_RS01715 PF04055 Radical SAM superfamily ACLO_RS01720 PF02569 Pantoate-beta-alanine ligase ACLO_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS01730 PF01648 4'-phosphopantetheinyl transferase superfamily ACLO_RS01735 PF03652 Holliday junction resolvase ACLO_RS01750 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACLO_RS01755 PF01474 Class-II DAHP synthetase family ACLO_RS01760 PF03502 Nucleoside-specific channel-forming protein, Tsx ACLO_RS01765 PF03960 ArsC family ACLO_RS01770 PF02686 Glu-tRNAGln amidotransferase C subunit ACLO_RS01775 PF01702 Queuine tRNA-ribosyltransferase ACLO_RS01785 PF00155 Aminotransferase class I and II ACLO_RS01795 PF02875 Mur ligase family, glutamate ligase domain ACLO_RS01795 PF08245 Mur ligase middle domain ACLO_RS01795 PF01225 Mur ligase family, catalytic domain ACLO_RS01805 PF04748 Divergent polysaccharide deacetylase ACLO_RS01810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACLO_RS01810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACLO_RS01815 PF00773 RNB domain ACLO_RS01820 PF02623 FliW protein ACLO_RS01830 PF01250 Ribosomal protein S6 ACLO_RS01835 PF00436 Single-strand binding protein family ACLO_RS01840 PF01084 Ribosomal protein S18 ACLO_RS01850 PF01406 tRNA synthetases class I (C) catalytic domain ACLO_RS01850 PF09190 DALR domain ACLO_RS01855 PF08529 NusA N-terminal domain ACLO_RS01855 PF13184 NusA-like KH domain ACLO_RS01865 PF04055 Radical SAM superfamily ACLO_RS01865 PF00919 Uncharacterized protein family UPF0004 ACLO_RS01865 PF01938 TRAM domain ACLO_RS01870 PF04028 Domain of unknown function (DUF374) ACLO_RS01880 PF04055 Radical SAM superfamily ACLO_RS01890 PF00484 Carbonic anhydrase ACLO_RS01895 PF00155 Aminotransferase class I and II ACLO_RS01900 PF02021 Uncharacterised protein family UPF0102 ACLO_RS01915 PF05736 OprF membrane domain ACLO_RS01915 PF00691 OmpA family ACLO_RS01920 PF00224 Pyruvate kinase, barrel domain ACLO_RS01920 PF00391 PEP-utilising enzyme, mobile domain ACLO_RS01920 PF02887 Pyruvate kinase, alpha/beta domain ACLO_RS01925 PF00690 Cation transporter/ATPase, N-terminus ACLO_RS01925 PF00689 Cation transporting ATPase, C-terminus ACLO_RS01935 PF00202 Aminotransferase class-III ACLO_RS01945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACLO_RS01945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACLO_RS01950 PF00425 chorismate binding enzyme ACLO_RS01955 PF01063 Amino-transferase class IV ACLO_RS01970 PF03591 AzlC protein ACLO_RS01975 PF05437 Branched-chain amino acid transport protein (AzlD) ACLO_RS01980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACLO_RS01980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACLO_RS01985 PF02504 Fatty acid synthesis protein ACLO_RS01990 PF01783 Ribosomal L32p protein family ACLO_RS02000 PF00334 Nucleoside diphosphate kinase ACLO_RS02005 PF00037 4Fe-4S binding domain ACLO_RS02010 PF00578 AhpC/TSA family ACLO_RS02010 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACLO_RS02015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACLO_RS02015 PF07498 Rho termination factor, N-terminal domain ACLO_RS02015 PF07497 Rho termination factor, RNA-binding domain ACLO_RS02020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACLO_RS02020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACLO_RS02025 PF01177 Asp/Glu/Hydantoin racemase ACLO_RS02030 PF12169 DNA polymerase III subunits gamma and tau domain III ACLO_RS02030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACLO_RS02030 PF12170 DNA polymerase III tau subunit V interacting with alpha ACLO_RS02040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACLO_RS02040 PF03900 Porphobilinogen deaminase, C-terminal domain ACLO_RS02050 PF00563 EAL domain ACLO_RS02050 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS02055 PF04303 PrpF protein ACLO_RS02060 PF00694 Aconitase C-terminal domain ACLO_RS02060 PF00330 Aconitase family (aconitate hydratase) ACLO_RS02065 PF00285 Citrate synthase, C-terminal domain ACLO_RS02080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACLO_RS02080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACLO_RS02105 PF00570 HRDC domain ACLO_RS02105 PF16124 RecQ zinc-binding ACLO_RS02105 PF09382 RQC domain ACLO_RS02105 PF00270 DEAD/DEAH box helicase ACLO_RS02105 PF00271 Helicase conserved C-terminal domain ACLO_RS02110 PF13649 Methyltransferase domain ACLO_RS02125 PF01863 Protein of unknown function DUF45 ACLO_RS02130 PF00350 Dynamin family ACLO_RS02135 PF00350 Dynamin family ACLO_RS02140 PF13183 4Fe-4S dicluster domain ACLO_RS02140 PF13085 2Fe-2S iron-sulfur cluster binding domain ACLO_RS02145 PF02910 Fumarate reductase flavoprotein C-term ACLO_RS02145 PF00890 FAD binding domain ACLO_RS02150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACLO_RS02155 PF00361 Proton-conducting membrane transporter ACLO_RS02160 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACLO_RS02160 PF00361 Proton-conducting membrane transporter ACLO_RS02165 PF00361 Proton-conducting membrane transporter ACLO_RS02165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACLO_RS02170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACLO_RS02175 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACLO_RS02180 PF12838 4Fe-4S dicluster domain ACLO_RS02185 PF00146 NADH dehydrogenase ACLO_RS02190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACLO_RS02190 PF00384 Molybdopterin oxidoreductase ACLO_RS02190 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ACLO_RS02195 PF00285 Citrate synthase, C-terminal domain ACLO_RS02200 PF10531 SLBB domain ACLO_RS02200 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACLO_RS02200 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACLO_RS02210 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACLO_RS02210 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACLO_RS02215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACLO_RS02220 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACLO_RS02225 PF00155 Aminotransferase class I and II ACLO_RS02230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ACLO_RS02235 PF12821 Threonine/Serine exporter, ThrE ACLO_RS02235 PF06738 Putative threonine/serine exporter ACLO_RS02240 PF06738 Putative threonine/serine exporter ACLO_RS02250 PF03309 Type III pantothenate kinase ACLO_RS02255 PF01634 ATP phosphoribosyltransferase ACLO_RS02270 PF08448 PAS fold ACLO_RS02270 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS02275 PF00579 tRNA synthetases class I (W and Y) ACLO_RS02290 PF02403 Seryl-tRNA synthetase N-terminal domain ACLO_RS02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACLO_RS02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS02305 PF08447 PAS fold ACLO_RS02325 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ACLO_RS02330 PF00037 4Fe-4S binding domain ACLO_RS02330 PF12801 4Fe-4S binding domain ACLO_RS02335 PF12800 4Fe-4S binding domain ACLO_RS02335 PF12838 4Fe-4S dicluster domain ACLO_RS02340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACLO_RS02340 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACLO_RS02340 PF01568 Molydopterin dinucleotide binding domain ACLO_RS02340 PF00384 Molybdopterin oxidoreductase ACLO_RS02345 PF03480 Bacterial extracellular solute-binding protein, family 7 ACLO_RS02350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACLO_RS02355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACLO_RS02360 PF08447 PAS fold ACLO_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS02360 PF08448 PAS fold ACLO_RS02365 PF00072 Response regulator receiver domain ACLO_RS02370 PF03737 Aldolase/RraA ACLO_RS02375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACLO_RS02390 PF00591 Glycosyl transferase family, a/b domain ACLO_RS02390 PF02885 Glycosyl transferase family, helical bundle domain ACLO_RS02395 PF06463 Molybdenum Cofactor Synthesis C ACLO_RS02395 PF04055 Radical SAM superfamily ACLO_RS02410 PF02222 ATP-grasp domain ACLO_RS02410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACLO_RS02415 PF00731 AIR carboxylase ACLO_RS02420 PF00312 Ribosomal protein S15 ACLO_RS02425 PF02082 Transcriptional regulator ACLO_RS02440 PF08521 Two-component sensor kinase N-terminal ACLO_RS02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS02440 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS02445 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS02445 PF00072 Response regulator receiver domain ACLO_RS02455 PF01116 Fructose-bisphosphate aldolase class-II ACLO_RS02460 PF00005 ABC transporter ACLO_RS02460 PF08402 TOBE domain ACLO_RS02465 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS02475 PF13416 Bacterial extracellular solute-binding protein ACLO_RS02480 PF00313 'Cold-shock' DNA-binding domain ACLO_RS02485 PF02472 Biopolymer transport protein ExbD/TolR ACLO_RS02490 PF01618 MotA/TolQ/ExbB proton channel family ACLO_RS02500 PF08447 PAS fold ACLO_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS02500 PF00989 PAS fold ACLO_RS02500 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS02505 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS02505 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS02505 PF00563 EAL domain ACLO_RS02510 PF01202 Shikimate kinase ACLO_RS02515 PF00815 Histidinol dehydrogenase ACLO_RS02525 PF00348 Polyprenyl synthetase ACLO_RS02530 PF01488 Shikimate / quinate 5-dehydrogenase ACLO_RS02530 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACLO_RS02530 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACLO_RS02535 PF04073 Aminoacyl-tRNA editing domain ACLO_RS02535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACLO_RS02535 PF03129 Anticodon binding domain ACLO_RS02540 PF05552 Conserved TM helix ACLO_RS02540 PF00924 Mechanosensitive ion channel ACLO_RS02545 PF01966 HD domain ACLO_RS02545 PF01743 Poly A polymerase head domain ACLO_RS02545 PF12627 Probable RNA and SrmB- binding site of polymerase A ACLO_RS02570 PF02699 Preprotein translocase subunit ACLO_RS02575 PF02355 Protein export membrane protein ACLO_RS02580 PF02355 Protein export membrane protein ACLO_RS02580 PF07549 SecD/SecF GG Motif ACLO_RS02590 PF09334 tRNA synthetases class I (M) ACLO_RS02590 PF00133 tRNA synthetases class I (I, L, M and V) ACLO_RS02590 PF13603 Leucyl-tRNA synthetase, Domain 2 ACLO_RS02600 PF08245 Mur ligase middle domain ACLO_RS02600 PF02875 Mur ligase family, glutamate ligase domain ACLO_RS02610 PF00999 Sodium/hydrogen exchanger family ACLO_RS02610 PF02254 TrkA-N domain ACLO_RS02640 PF02086 D12 class N6 adenine-specific DNA methyltransferase ACLO_RS02655 PF04556 DpnII restriction endonuclease ACLO_RS02670 PF01555 DNA methylase ACLO_RS02675 PF02559 CarD-like/TRCF domain ACLO_RS02675 PF00270 DEAD/DEAH box helicase ACLO_RS02675 PF00271 Helicase conserved C-terminal domain ACLO_RS02675 PF03461 TRCF domain ACLO_RS02675 PF17757 UvrB interaction domain ACLO_RS02685 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS02685 PF00360 Phytochrome region ACLO_RS02685 PF00563 EAL domain ACLO_RS02685 PF01590 GAF domain ACLO_RS02695 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS02695 PF00072 Response regulator receiver domain ACLO_RS02710 PF02743 Cache domain ACLO_RS02710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS02710 PF00672 HAMP domain ACLO_RS02715 PF00072 Response regulator receiver domain ACLO_RS02715 PF00158 Sigma-54 interaction domain ACLO_RS02715 PF02954 Bacterial regulatory protein, Fis family ACLO_RS02720 PF13581 Histidine kinase-like ATPase domain ACLO_RS02720 PF07536 HWE histidine kinase ACLO_RS02720 PF13426 PAS domain ACLO_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS02725 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS02725 PF00672 HAMP domain ACLO_RS02730 PF13277 YmdB-like protein ACLO_RS02745 PF01209 ubiE/COQ5 methyltransferase family ACLO_RS02750 PF02601 Exonuclease VII, large subunit ACLO_RS02750 PF13742 OB-fold nucleic acid binding domain ACLO_RS02755 PF01584 CheW-like domain ACLO_RS02760 PF02954 Bacterial regulatory protein, Fis family ACLO_RS02760 PF00072 Response regulator receiver domain ACLO_RS02760 PF00158 Sigma-54 interaction domain ACLO_RS02765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACLO_RS02775 PF02261 Aspartate decarboxylase ACLO_RS02780 PF02575 YbaB/EbfC DNA-binding family ACLO_RS02785 PF00348 Polyprenyl synthetase ACLO_RS02790 PF00166 Chaperonin 10 Kd subunit ACLO_RS02795 PF00118 TCP-1/cpn60 chaperonin family ACLO_RS02800 PF00459 Inositol monophosphatase family ACLO_RS02805 PF01380 SIS domain ACLO_RS02820 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACLO_RS02820 PF02772 S-adenosylmethionine synthetase, central domain ACLO_RS02820 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACLO_RS02825 PF17848 Acetyl-coA carboxylase zinc finger domain ACLO_RS02825 PF01039 Carboxyl transferase domain ACLO_RS02830 PF02581 Thiamine monophosphate synthase ACLO_RS02835 PF02590 Predicted SPOUT methyltransferase ACLO_RS02845 PF01207 Dihydrouridine synthase (Dus) ACLO_RS02855 PF01434 Peptidase family M41 ACLO_RS02855 PF17862 AAA+ lid domain ACLO_RS02855 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS02860 PF00682 HMGL-like ACLO_RS02860 PF08502 LeuA allosteric (dimerisation) domain ACLO_RS02875 PF01624 MutS domain I ACLO_RS02875 PF05188 MutS domain II ACLO_RS02875 PF05192 MutS domain III ACLO_RS02875 PF00488 MutS domain V ACLO_RS02875 PF05190 MutS family domain IV ACLO_RS02890 PF03334 Na+/H+ antiporter subunit ACLO_RS02910 PF00361 Proton-conducting membrane transporter ACLO_RS02915 PF00361 Proton-conducting membrane transporter ACLO_RS02920 PF00361 Proton-conducting membrane transporter ACLO_RS02925 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS02930 PF00977 Histidine biosynthesis protein ACLO_RS02935 PF01370 NAD dependent epimerase/dehydratase family ACLO_RS02935 PF08338 Domain of unknown function (DUF1731) ACLO_RS02940 PF00117 Glutamine amidotransferase class-I ACLO_RS02960 PF06067 Domain of unknown function (DUF932) ACLO_RS03000 PF02384 N-6 DNA Methylase ACLO_RS03005 PF01420 Type I restriction modification DNA specificity domain ACLO_RS03010 PF13166 AAA domain ACLO_RS03020 PF12728 Helix-turn-helix domain ACLO_RS03020 PF02661 Fic/DOC family ACLO_RS03025 PF18766 SWI2/SNF2 ATPase ACLO_RS03025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACLO_RS03025 PF11867 Domain of unknown function (DUF3387) ACLO_RS03060 PF06421 GTP-binding protein LepA C-terminus ACLO_RS03060 PF00009 Elongation factor Tu GTP binding domain ACLO_RS03060 PF00679 Elongation factor G C-terminus ACLO_RS03060 PF03144 Elongation factor Tu domain 2 ACLO_RS03065 PF05736 OprF membrane domain ACLO_RS03065 PF00691 OmpA family ACLO_RS03070 PF05736 OprF membrane domain ACLO_RS03070 PF00691 OmpA family ACLO_RS03075 PF14572 Phosphoribosyl synthetase-associated domain ACLO_RS03075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACLO_RS03100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACLO_RS03105 PF01321 Creatinase/Prolidase N-terminal domain ACLO_RS03105 PF00557 Metallopeptidase family M24 ACLO_RS03110 PF01220 Dehydroquinase class II ACLO_RS03115 PF01979 Amidohydrolase family ACLO_RS03120 PF01343 Peptidase family S49 ACLO_RS03125 PF00871 Acetokinase family ACLO_RS03130 PF01515 Phosphate acetyl/butaryl transferase ACLO_RS03135 PF00871 Acetokinase family ACLO_RS03145 PF00929 Exonuclease ACLO_RS03145 PF02811 PHP domain ACLO_RS03145 PF14579 Helix-hairpin-helix motif ACLO_RS03145 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACLO_RS03145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACLO_RS03155 PF00474 Sodium:solute symporter family ACLO_RS03165 PF00474 Sodium:solute symporter family ACLO_RS03175 PF00929 Exonuclease ACLO_RS03185 PF00474 Sodium:solute symporter family ACLO_RS03195 PF00072 Response regulator receiver domain ACLO_RS03195 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS03200 PF13426 PAS domain ACLO_RS03200 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS03200 PF00672 HAMP domain ACLO_RS03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS03245 PF02464 Competence-damaged protein ACLO_RS03245 PF00994 Probable molybdopterin binding domain ACLO_RS03245 PF18146 Damage-inducible protein CinA KH domain ACLO_RS03250 PF06039 Malate:quinone oxidoreductase (Mqo) ACLO_RS03255 PF00133 tRNA synthetases class I (I, L, M and V) ACLO_RS03255 PF08264 Anticodon-binding domain of tRNA ACLO_RS03270 PF02875 Mur ligase family, glutamate ligase domain ACLO_RS03270 PF08245 Mur ligase middle domain ACLO_RS03275 PF08447 PAS fold ACLO_RS03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS03275 PF08448 PAS fold ACLO_RS03290 PF01882 Protein of unknown function DUF58 ACLO_RS03295 PF07726 ATPase family associated with various cellular activities (AAA) ACLO_RS03295 PF17863 AAA lid domain ACLO_RS03300 PF00318 Ribosomal protein S2 ACLO_RS03305 PF00889 Elongation factor TS ACLO_RS03310 PF00005 ABC transporter ACLO_RS03320 PF00625 Guanylate kinase ACLO_RS03325 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS03325 PF00563 EAL domain ACLO_RS03325 PF08448 PAS fold ACLO_RS03330 PF00403 Heavy-metal-associated domain ACLO_RS03345 PF00005 ABC transporter ACLO_RS03345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACLO_RS03350 PF00762 Ferrochelatase ACLO_RS03355 PF01871 AMMECR1 ACLO_RS03360 PF01875 Memo-like protein ACLO_RS03365 PF02698 DUF218 domain ACLO_RS03370 PF00005 ABC transporter ACLO_RS03375 PF00950 ABC 3 transport family ACLO_RS03385 PF02690 Na+/Pi-cotransporter ACLO_RS03395 PF17783 CvfB-like winged helix domain ACLO_RS03395 PF13509 S1 domain ACLO_RS03400 PF08534 Redoxin ACLO_RS03415 PF00174 Oxidoreductase molybdopterin binding domain ACLO_RS03420 PF01794 Ferric reductase like transmembrane component ACLO_RS03425 PF13533 Biotin-lipoyl like ACLO_RS03430 PF00873 AcrB/AcrD/AcrF family ACLO_RS03440 PF00580 UvrD/REP helicase N-terminal domain ACLO_RS03440 PF13361 UvrD-like helicase C-terminal domain ACLO_RS03445 PF00999 Sodium/hydrogen exchanger family ACLO_RS03445 PF02254 TrkA-N domain ACLO_RS03445 PF02080 TrkA-C domain ACLO_RS03450 PF00174 Oxidoreductase molybdopterin binding domain ACLO_RS03455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACLO_RS03490 PF03190 Protein of unknown function, DUF255 ACLO_RS03525 PF00753 Metallo-beta-lactamase superfamily ACLO_RS03540 PF00133 tRNA synthetases class I (I, L, M and V) ACLO_RS03540 PF10458 Valyl tRNA synthetase tRNA binding arm ACLO_RS03540 PF08264 Anticodon-binding domain of tRNA ACLO_RS03545 PF01554 MatE ACLO_RS03550 PF00583 Acetyltransferase (GNAT) family ACLO_RS03560 PF09962 Uncharacterized conserved protein (DUF2196) ACLO_RS03565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACLO_RS03570 PF00873 AcrB/AcrD/AcrF family ACLO_RS03590 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS03600 PF07690 Major Facilitator Superfamily ACLO_RS03605 PF01725 Ham1 family ACLO_RS03625 PF03807 NADP oxidoreductase coenzyme F420-dependent ACLO_RS03625 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACLO_RS03630 PF13525 Outer membrane lipoprotein ACLO_RS03635 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACLO_RS03635 PF05362 Lon protease (S16) C-terminal proteolytic domain ACLO_RS03635 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS03670 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACLO_RS03685 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACLO_RS03700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACLO_RS03700 PF00529 HlyD membrane-fusion protein of T1SS ACLO_RS03705 PF00873 AcrB/AcrD/AcrF family ACLO_RS03715 PF00893 Small Multidrug Resistance protein ACLO_RS03725 PF08448 PAS fold ACLO_RS03725 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS03730 PF06977 SdiA-regulated ACLO_RS03735 PF00289 Biotin carboxylase, N-terminal domain ACLO_RS03735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACLO_RS03735 PF02785 Biotin carboxylase C-terminal domain ACLO_RS03740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS03740 PF08447 PAS fold ACLO_RS03745 PF00672 HAMP domain ACLO_RS03745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS03745 PF02203 Tar ligand binding domain homologue ACLO_RS03750 PF00892 EamA-like transporter family ACLO_RS03775 PF02657 Fe-S metabolism associated domain ACLO_RS03780 PF00266 Aminotransferase class-V ACLO_RS03790 PF00005 ABC transporter ACLO_RS03795 PF01458 Uncharacterized protein family (UPF0051) ACLO_RS03800 PF00266 Aminotransferase class-V ACLO_RS03805 PF01106 NifU-like domain ACLO_RS03805 PF01592 NifU-like N terminal domain ACLO_RS03805 PF04324 BFD-like [2Fe-2S] binding domain ACLO_RS03815 PF03448 MgtE intracellular N domain ACLO_RS03815 PF01769 Divalent cation transporter ACLO_RS03815 PF00571 CBS domain ACLO_RS03820 PF01925 Sulfite exporter TauE/SafE ACLO_RS03825 PF17151 Periplasmic sensor domain ACLO_RS03825 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS03850 PF00206 Lyase ACLO_RS03850 PF14698 Argininosuccinate lyase C-terminal ACLO_RS03855 PF01584 CheW-like domain ACLO_RS03855 PF00072 Response regulator receiver domain ACLO_RS03860 PF00899 ThiF family ACLO_RS03865 PF01272 Transcription elongation factor, GreA/GreB, C-term ACLO_RS03865 PF03449 Transcription elongation factor, N-terminal ACLO_RS03870 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACLO_RS03870 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACLO_RS03885 PF04851 Type III restriction enzyme, res subunit ACLO_RS03885 PF02151 UvrB/uvrC motif ACLO_RS03885 PF12344 Ultra-violet resistance protein B ACLO_RS03885 PF17757 UvrB interaction domain ACLO_RS03885 PF00271 Helicase conserved C-terminal domain ACLO_RS03890 PF00730 HhH-GPD superfamily base excision DNA repair protein ACLO_RS03890 PF10576 Iron-sulfur binding domain of endonuclease III ACLO_RS03890 PF00633 Helix-hairpin-helix motif ACLO_RS03920 PF02502 Ribose/Galactose Isomerase ACLO_RS03925 PF10502 Signal peptidase, peptidase S26 ACLO_RS03930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACLO_RS03930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACLO_RS03935 PF01386 Ribosomal L25p family ACLO_RS03935 PF14693 Ribosomal protein TL5, C-terminal domain ACLO_RS03940 PF01195 Peptidyl-tRNA hydrolase ACLO_RS03955 PF01520 N-acetylmuramoyl-L-alanine amidase ACLO_RS03965 PF00579 tRNA synthetases class I (W and Y) ACLO_RS03965 PF01479 S4 domain ACLO_RS03970 PF02824 TGS domain ACLO_RS03970 PF04607 Region found in RelA / SpoT proteins ACLO_RS03970 PF13291 ACT domain ACLO_RS03975 PF01192 RNA polymerase Rpb6 ACLO_RS03980 PF00696 Amino acid kinase family ACLO_RS03990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACLO_RS03995 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACLO_RS04000 PF00425 chorismate binding enzyme ACLO_RS04000 PF04715 Anthranilate synthase component I, N terminal region ACLO_RS04010 PF00464 Serine hydroxymethyltransferase ACLO_RS04015 PF00152 tRNA synthetases class II (D, K and N) ACLO_RS04015 PF01336 OB-fold nucleic acid binding domain ACLO_RS04025 PF08448 PAS fold ACLO_RS04025 PF08447 PAS fold ACLO_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS04030 PF04551 GcpE protein ACLO_RS04035 PF17151 Periplasmic sensor domain ACLO_RS04035 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS04040 PF00772 DnaB-like helicase N terminal domain ACLO_RS04040 PF03796 DnaB-like helicase C terminal domain ACLO_RS04045 PF07963 Prokaryotic N-terminal methylation motif ACLO_RS04045 PF08334 Type II secretion system (T2SS), protein G ACLO_RS04050 PF14743 DNA ligase OB-like domain ACLO_RS04050 PF01068 ATP dependent DNA ligase domain ACLO_RS04055 PF00156 Phosphoribosyl transferase domain ACLO_RS04060 PF00291 Pyridoxal-phosphate dependent enzyme ACLO_RS04070 PF02789 Cytosol aminopeptidase family, N-terminal domain ACLO_RS04070 PF00883 Cytosol aminopeptidase family, catalytic domain ACLO_RS04080 PF02472 Biopolymer transport protein ExbD/TolR ACLO_RS04085 PF01618 MotA/TolQ/ExbB proton channel family ACLO_RS04100 PF00005 ABC transporter ACLO_RS04100 PF02687 FtsX-like permease family ACLO_RS04100 PF12704 MacB-like periplasmic core domain ACLO_RS04105 PF00005 ABC transporter ACLO_RS04105 PF12704 MacB-like periplasmic core domain ACLO_RS04105 PF02687 FtsX-like permease family ACLO_RS04125 PF01261 Xylose isomerase-like TIM barrel ACLO_RS04190 PF01475 Ferric uptake regulator family ACLO_RS04205 PF17910 FeoB cytosolic helical domain ACLO_RS04205 PF02421 Ferrous iron transport protein B ACLO_RS04205 PF07670 Nucleoside recognition ACLO_RS04205 PF07664 Ferrous iron transport protein B C terminus ACLO_RS04205 PF04023 FeoA domain ACLO_RS04210 PF04023 FeoA domain ACLO_RS04220 PF00005 ABC transporter ACLO_RS04230 PF10636 Hemin uptake protein hemP ACLO_RS04235 PF00593 TonB dependent receptor ACLO_RS04235 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS04240 PF13640 2OG-Fe(II) oxygenase superfamily ACLO_RS04240 PF18331 PKHD-type hydroxylase C-terminal domain ACLO_RS04245 PF01070 FMN-dependent dehydrogenase ACLO_RS04250 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS04250 PF00593 TonB dependent receptor ACLO_RS04265 PF01740 STAS domain ACLO_RS04265 PF13426 PAS domain ACLO_RS04275 PF02769 AIR synthase related protein, C-terminal domain ACLO_RS04275 PF00586 AIR synthase related protein, N-terminal domain ACLO_RS04280 PF01142 tRNA pseudouridine synthase D (TruD) ACLO_RS04295 PF01330 RuvA N terminal domain ACLO_RS04295 PF07499 RuvA, C-terminal domain ACLO_RS04300 PF01820 D-ala D-ala ligase N-terminus ACLO_RS04300 PF07478 D-ala D-ala ligase C-terminus ACLO_RS04305 PF00561 alpha/beta hydrolase fold ACLO_RS04310 PF02875 Mur ligase family, glutamate ligase domain ACLO_RS04310 PF08245 Mur ligase middle domain ACLO_RS04310 PF01225 Mur ligase family, catalytic domain ACLO_RS04325 PF01266 FAD dependent oxidoreductase ACLO_RS04330 PF00338 Ribosomal protein S10p/S20e ACLO_RS04335 PF00297 Ribosomal protein L3 ACLO_RS04340 PF00573 Ribosomal protein L4/L1 family ACLO_RS04345 PF00276 Ribosomal protein L23 ACLO_RS04350 PF00181 Ribosomal Proteins L2, RNA binding domain ACLO_RS04350 PF03947 Ribosomal Proteins L2, C-terminal domain ACLO_RS04355 PF00203 Ribosomal protein S19 ACLO_RS04360 PF00237 Ribosomal protein L22p/L17e ACLO_RS04365 PF07650 KH domain ACLO_RS04365 PF00189 Ribosomal protein S3, C-terminal domain ACLO_RS04370 PF00252 Ribosomal protein L16p/L10e ACLO_RS04375 PF00831 Ribosomal L29 protein ACLO_RS04380 PF00366 Ribosomal protein S17 ACLO_RS04385 PF00238 Ribosomal protein L14p/L23e ACLO_RS04390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACLO_RS04390 PF00467 KOW motif ACLO_RS04395 PF00281 Ribosomal protein L5 ACLO_RS04395 PF00673 ribosomal L5P family C-terminus ACLO_RS04400 PF00253 Ribosomal protein S14p/S29e ACLO_RS04405 PF00410 Ribosomal protein S8 ACLO_RS04410 PF00347 Ribosomal protein L6 ACLO_RS04415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACLO_RS04420 PF00333 Ribosomal protein S5, N-terminal domain ACLO_RS04420 PF03719 Ribosomal protein S5, C-terminal domain ACLO_RS04425 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACLO_RS04430 PF00344 SecY translocase ACLO_RS04435 PF00557 Metallopeptidase family M24 ACLO_RS04440 PF01176 Translation initiation factor 1A / IF-1 ACLO_RS04450 PF03167 Uracil DNA glycosylase superfamily ACLO_RS04460 PF00152 tRNA synthetases class II (D, K and N) ACLO_RS04460 PF02938 GAD domain ACLO_RS04460 PF01336 OB-fold nucleic acid binding domain ACLO_RS04475 PF04055 Radical SAM superfamily ACLO_RS04475 PF08497 Radical SAM N-terminal ACLO_RS04480 PF05191 Adenylate kinase, active site lid ACLO_RS04500 PF02653 Branched-chain amino acid transport system / permease component ACLO_RS04510 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACLO_RS04510 PF00005 ABC transporter ACLO_RS04515 PF00005 ABC transporter ACLO_RS04530 PF01774 UreD urease accessory protein ACLO_RS04535 PF00699 Urease beta subunit ACLO_RS04535 PF00547 Urease, gamma subunit ACLO_RS04540 PF01979 Amidohydrolase family ACLO_RS04540 PF00449 Urease alpha-subunit, N-terminal domain ACLO_RS04545 PF05194 UreE urease accessory protein, C-terminal domain ACLO_RS04555 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACLO_RS04560 PF00873 AcrB/AcrD/AcrF family ACLO_RS04565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACLO_RS04565 PF00529 HlyD membrane-fusion protein of T1SS ACLO_RS04585 PF08448 PAS fold ACLO_RS04585 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS04590 PF03372 Endonuclease/Exonuclease/phosphatase family ACLO_RS04620 PF00342 Phosphoglucose isomerase ACLO_RS04625 PF00483 Nucleotidyl transferase ACLO_RS04630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACLO_RS04630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACLO_RS04630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACLO_RS04630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACLO_RS04665 PF06865 Pyrimidine/purine nucleoside phosphorylase ACLO_RS04685 PF06071 Protein of unknown function (DUF933) ACLO_RS04685 PF01926 50S ribosome-binding GTPase ACLO_RS04690 PF00860 Permease family ACLO_RS04695 PF00156 Phosphoribosyl transferase domain ACLO_RS04700 PF04241 Protein of unknown function (DUF423) ACLO_RS04715 PF00860 Permease family ACLO_RS04720 PF04461 Protein of unknown function (DUF520) ACLO_RS04730 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS04730 PF00072 Response regulator receiver domain ACLO_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS04740 PF00293 NUDIX domain ACLO_RS04750 PF02253 Phospholipase A1 ACLO_RS04755 PF00834 Ribulose-phosphate 3 epimerase family ACLO_RS04760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACLO_RS04765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACLO_RS04765 PF11490 DNA polymerase III polC-type N-terminus II ACLO_RS04765 PF14579 Helix-hairpin-helix motif ACLO_RS04765 PF02811 PHP domain ACLO_RS04765 PF00929 Exonuclease ACLO_RS04765 PF14480 DNA polymerase III polC-type N-terminus I ACLO_RS04765 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACLO_RS04770 PF13291 ACT domain ACLO_RS04770 PF04607 Region found in RelA / SpoT proteins ACLO_RS04770 PF02824 TGS domain ACLO_RS04780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACLO_RS04785 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ACLO_RS04785 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ACLO_RS04785 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ACLO_RS04795 PF05175 Methyltransferase small domain ACLO_RS04800 PF03692 Putative zinc- or iron-chelating domain ACLO_RS04810 PF00218 Indole-3-glycerol phosphate synthase ACLO_RS04815 PF03466 LysR substrate binding domain ACLO_RS04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACLO_RS04820 PF01361 Tautomerase enzyme ACLO_RS04830 PF01168 Alanine racemase, N-terminal domain ACLO_RS04835 PF17820 PDZ domain ACLO_RS04835 PF02163 Peptidase family M50 ACLO_RS04840 PF01066 CDP-alcohol phosphatidyltransferase ACLO_RS04850 PF00701 Dihydrodipicolinate synthetase family ACLO_RS04865 PF01180 Dihydroorotate dehydrogenase ACLO_RS04870 PF00005 ABC transporter ACLO_RS04870 PF00664 ABC transporter transmembrane region ACLO_RS04875 PF03023 Lipid II flippase MurJ ACLO_RS04885 PF02915 Rubrerythrin ACLO_RS04895 PF01699 Sodium/calcium exchanger protein ACLO_RS04900 PF02130 Uncharacterized protein family UPF0054 ACLO_RS04905 PF18073 Rubredoxin metal binding domain ACLO_RS04945 PF00448 SRP54-type protein, GTPase domain ACLO_RS04950 PF00578 AhpC/TSA family ACLO_RS04960 PF01966 HD domain ACLO_RS04960 PF00013 KH domain ACLO_RS04960 PF12072 Domain of unknown function (DUF3552) ACLO_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS04970 PF12911 N-terminal TM domain of oligopeptide transport permease C ACLO_RS04980 PF00106 short chain dehydrogenase ACLO_RS04995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACLO_RS05005 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS05005 PF00072 Response regulator receiver domain ACLO_RS05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACLO_RS05020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACLO_RS05025 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS05025 PF17151 Periplasmic sensor domain ACLO_RS05030 PF09424 Yqey-like protein ACLO_RS05045 PF02535 ZIP Zinc transporter ACLO_RS05050 PF01966 HD domain ACLO_RS05055 PF01545 Cation efflux family ACLO_RS05055 PF16916 Dimerisation domain of Zinc Transporter ACLO_RS05060 PF00155 Aminotransferase class I and II ACLO_RS05065 PF01863 Protein of unknown function DUF45 ACLO_RS05080 PF02910 Fumarate reductase flavoprotein C-term ACLO_RS05080 PF00890 FAD binding domain ACLO_RS05085 PF00117 Glutamine amidotransferase class-I ACLO_RS05085 PF00958 GMP synthase C terminal domain ACLO_RS05085 PF02540 NAD synthase ACLO_RS05095 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ACLO_RS05100 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ACLO_RS05110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACLO_RS05115 PF00226 DnaJ domain ACLO_RS05115 PF05099 Tellurite resistance protein TerB ACLO_RS05130 PF01042 Endoribonuclease L-PSP ACLO_RS05155 PF00561 alpha/beta hydrolase fold ACLO_RS05160 PF17746 SfsA N-terminal OB domain ACLO_RS05160 PF03749 Sugar fermentation stimulation protein RE domain ACLO_RS05175 PF03062 MBOAT, membrane-bound O-acyltransferase family ACLO_RS05180 PF00849 RNA pseudouridylate synthase ACLO_RS05185 PF01272 Transcription elongation factor, GreA/GreB, C-term ACLO_RS05185 PF03449 Transcription elongation factor, N-terminal ACLO_RS05190 PF17785 PUA-like domain ACLO_RS05190 PF10672 S-adenosylmethionine-dependent methyltransferase ACLO_RS05195 PF07690 Major Facilitator Superfamily ACLO_RS05210 PF01103 Surface antigen ACLO_RS05210 PF07244 Surface antigen variable number repeat ACLO_RS05210 PF17243 POTRA domain TamA domain 1 ACLO_RS05215 PF00106 short chain dehydrogenase ACLO_RS05220 PF02540 NAD synthase ACLO_RS05220 PF00958 GMP synthase C terminal domain ACLO_RS05220 PF00117 Glutamine amidotransferase class-I ACLO_RS05265 PF07669 Eco57I restriction-modification methylase ACLO_RS05275 PF00571 CBS domain ACLO_RS05275 PF03471 Transporter associated domain ACLO_RS05280 PF03734 L,D-transpeptidase catalytic domain ACLO_RS05280 PF01471 Putative peptidoglycan binding domain ACLO_RS05285 PF01594 AI-2E family transporter ACLO_RS05290 PF01966 HD domain ACLO_RS05305 PF03471 Transporter associated domain ACLO_RS05305 PF00571 CBS domain ACLO_RS05305 PF01595 Cyclin M transmembrane N-terminal domain ACLO_RS05320 PF17760 UvrA interaction domain ACLO_RS05320 PF17755 UvrA DNA-binding domain ACLO_RS05325 PF00440 Bacterial regulatory proteins, tetR family ACLO_RS05325 PF17932 Tetracyclin repressor-like, C-terminal domain ACLO_RS05340 PF00271 Helicase conserved C-terminal domain ACLO_RS05340 PF00270 DEAD/DEAH box helicase ACLO_RS05350 PF00132 Bacterial transferase hexapeptide (six repeats) ACLO_RS05350 PF06426 Serine acetyltransferase, N-terminal ACLO_RS05355 PF17810 Arginine decarboxylase helical bundle domain ACLO_RS05355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACLO_RS05355 PF17944 Arginine decarboxylase C-terminal helical extension ACLO_RS05360 PF03129 Anticodon binding domain ACLO_RS05360 PF13393 Histidyl-tRNA synthetase ACLO_RS05365 PF02223 Thymidylate kinase ACLO_RS05370 PF01467 Cytidylyltransferase-like ACLO_RS05375 PF02441 Flavoprotein ACLO_RS05385 PF01281 Ribosomal protein L9, N-terminal domain ACLO_RS05385 PF03948 Ribosomal protein L9, C-terminal domain ACLO_RS05390 PF00227 Proteasome subunit ACLO_RS05395 PF07724 AAA domain (Cdc48 subfamily) ACLO_RS05395 PF10431 C-terminal, D2-small domain, of ClpB protein ACLO_RS05405 PF01026 TatD related DNase ACLO_RS05415 PF03330 Lytic transglycolase ACLO_RS05415 PF05036 Sporulation related domain ACLO_RS05420 PF00475 Imidazoleglycerol-phosphate dehydratase ACLO_RS05440 PF01926 50S ribosome-binding GTPase ACLO_RS05445 PF00583 Acetyltransferase (GNAT) family ACLO_RS05450 PF00155 Aminotransferase class I and II ACLO_RS05450 PF00392 Bacterial regulatory proteins, gntR family ACLO_RS05455 PF01243 Pyridoxamine 5'-phosphate oxidase ACLO_RS05465 PF00873 AcrB/AcrD/AcrF family ACLO_RS05470 PF00873 AcrB/AcrD/AcrF family ACLO_RS05475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACLO_RS05485 PF00581 Rhodanese-like domain ACLO_RS05490 PF00989 PAS fold ACLO_RS05490 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05495 PF00813 FliP family ACLO_RS05500 PF05223 NTF2-like N-terminal transpeptidase domain ACLO_RS05500 PF00905 Penicillin binding protein transpeptidase domain ACLO_RS05500 PF03717 Penicillin-binding Protein dimerisation domain ACLO_RS05525 PF05199 GMC oxidoreductase ACLO_RS05525 PF00732 GMC oxidoreductase ACLO_RS05550 PF02491 SHS2 domain inserted in FTSA ACLO_RS05555 PF00091 Tubulin/FtsZ family, GTPase domain ACLO_RS05555 PF12327 FtsZ family, C-terminal domain ACLO_RS05570 PF01218 Coproporphyrinogen III oxidase ACLO_RS05580 PF00561 alpha/beta hydrolase fold ACLO_RS05585 PF02609 Exonuclease VII small subunit ACLO_RS05590 PF00488 MutS domain V ACLO_RS05590 PF01713 Smr domain ACLO_RS05610 PF01546 Peptidase family M20/M25/M40 ACLO_RS05610 PF07687 Peptidase dimerisation domain ACLO_RS05620 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ACLO_RS05635 PF00005 ABC transporter ACLO_RS05650 PF01817 Chorismate mutase type II ACLO_RS05650 PF00800 Prephenate dehydratase ACLO_RS05655 PF08274 PhnA Zinc-Ribbon ACLO_RS05655 PF03831 PhnA domain ACLO_RS05675 PF01161 Phosphatidylethanolamine-binding protein ACLO_RS05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACLO_RS05680 PF03466 LysR substrate binding domain ACLO_RS05685 PF03601 Conserved hypothetical protein 698 ACLO_RS05695 PF02203 Tar ligand binding domain homologue ACLO_RS05695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS05695 PF00672 HAMP domain ACLO_RS05710 PF01638 HxlR-like helix-turn-helix ACLO_RS05715 PF02525 Flavodoxin-like fold ACLO_RS05725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACLO_RS05730 PF00881 Nitroreductase family ACLO_RS05740 PF00989 PAS fold ACLO_RS05740 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS05740 PF18698 Histidine kinase sensor domain ACLO_RS05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05740 PF00672 HAMP domain ACLO_RS05755 PF08447 PAS fold ACLO_RS05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05755 PF08448 PAS fold ACLO_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05760 PF08447 PAS fold ACLO_RS05760 PF08448 PAS fold ACLO_RS05770 PF02895 Signal transducing histidine kinase, homodimeric domain ACLO_RS05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS05770 PF01584 CheW-like domain ACLO_RS05770 PF01627 Hpt domain ACLO_RS05770 PF09078 CheY binding ACLO_RS05775 PF00072 Response regulator receiver domain ACLO_RS05775 PF00196 Bacterial regulatory proteins, luxR family ACLO_RS05785 PF01593 Flavin containing amine oxidoreductase ACLO_RS05790 PF03109 ABC1 family ACLO_RS05800 PF11849 Domain of unknown function (DUF3369) ACLO_RS05810 PF08212 Lipocalin-like domain ACLO_RS05825 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ACLO_RS05840 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS05840 PF10442 FIST C domain ACLO_RS05840 PF08495 FIST N domain ACLO_RS05840 PF00563 EAL domain ACLO_RS05860 PF01593 Flavin containing amine oxidoreductase ACLO_RS05865 PF08212 Lipocalin-like domain ACLO_RS05875 PF00106 short chain dehydrogenase ACLO_RS05885 PF12848 ABC transporter ACLO_RS05885 PF00005 ABC transporter ACLO_RS05890 PF03061 Thioesterase superfamily ACLO_RS05895 PF11849 Domain of unknown function (DUF3369) ACLO_RS05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS05900 PF02203 Tar ligand binding domain homologue ACLO_RS05900 PF00672 HAMP domain ACLO_RS05905 PF08447 PAS fold ACLO_RS05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS05910 PF01653 NAD-dependent DNA ligase adenylation domain ACLO_RS05910 PF12826 Helix-hairpin-helix motif ACLO_RS05910 PF00533 BRCA1 C Terminus (BRCT) domain ACLO_RS05910 PF03120 NAD-dependent DNA ligase OB-fold domain ACLO_RS05930 PF00589 Phage integrase family ACLO_RS05935 PF01695 IstB-like ATP binding protein ACLO_RS06030 PF01906 Putative heavy-metal-binding ACLO_RS06040 PF00589 Phage integrase family ACLO_RS06040 PF02899 Phage integrase, N-terminal SAM-like domain ACLO_RS06085 PF09397 Ftsk gamma domain ACLO_RS06085 PF17854 FtsK alpha domain ACLO_RS06085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACLO_RS06085 PF01580 FtsK/SpoIIIE family ACLO_RS06090 PF01546 Peptidase family M20/M25/M40 ACLO_RS06090 PF07687 Peptidase dimerisation domain ACLO_RS06095 PF08447 PAS fold ACLO_RS06095 PF08448 PAS fold ACLO_RS06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS06100 PF00072 Response regulator receiver domain ACLO_RS06100 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS06105 PF01578 Cytochrome C assembly protein ACLO_RS06105 PF05140 ResB-like family ACLO_RS06140 PF14659 Phage integrase, N-terminal SAM-like domain ACLO_RS06140 PF00589 Phage integrase family ACLO_RS06145 PF08003 Protein of unknown function (DUF1698) ACLO_RS06150 PF00360 Phytochrome region ACLO_RS06150 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06150 PF01590 GAF domain ACLO_RS06150 PF00563 EAL domain ACLO_RS06155 PF08448 PAS fold ACLO_RS06155 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06155 PF00563 EAL domain ACLO_RS06155 PF08447 PAS fold ACLO_RS06160 PF00753 Metallo-beta-lactamase superfamily ACLO_RS06180 PF00291 Pyridoxal-phosphate dependent enzyme ACLO_RS06185 PF01556 DnaJ C terminal domain ACLO_RS06185 PF00684 DnaJ central domain ACLO_RS06185 PF00226 DnaJ domain ACLO_RS06190 PF13662 Toprim domain ACLO_RS06190 PF02132 RecR protein ACLO_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS06200 PF08448 PAS fold ACLO_RS06200 PF08447 PAS fold ACLO_RS06210 PF00132 Bacterial transferase hexapeptide (six repeats) ACLO_RS06215 PF00764 Arginosuccinate synthase ACLO_RS06220 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06220 PF00072 Response regulator receiver domain ACLO_RS06225 PF00593 TonB dependent receptor ACLO_RS06225 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS06235 PF00591 Glycosyl transferase family, a/b domain ACLO_RS06235 PF02885 Glycosyl transferase family, helical bundle domain ACLO_RS06240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACLO_RS06245 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACLO_RS06245 PF00005 ABC transporter ACLO_RS06250 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06250 PF08448 PAS fold ACLO_RS06255 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06255 PF00563 EAL domain ACLO_RS06255 PF08495 FIST N domain ACLO_RS06255 PF10442 FIST C domain ACLO_RS06260 PF02348 Cytidylyltransferase ACLO_RS06265 PF01367 5'-3' exonuclease, C-terminal SAM fold ACLO_RS06265 PF00476 DNA polymerase family A ACLO_RS06265 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACLO_RS06285 PF01790 Prolipoprotein diacylglyceryl transferase ACLO_RS06290 PF02754 Cysteine-rich domain ACLO_RS06290 PF02665 Nitrate reductase gamma subunit ACLO_RS06290 PF13183 4Fe-4S dicluster domain ACLO_RS06300 PF03737 Aldolase/RraA ACLO_RS06330 PF02547 Queuosine biosynthesis protein ACLO_RS06335 PF00902 Sec-independent protein translocase protein (TatC) ACLO_RS06340 PF02416 mttA/Hcf106 family ACLO_RS06345 PF00226 DnaJ domain ACLO_RS06345 PF05099 Tellurite resistance protein TerB ACLO_RS06365 PF02540 NAD synthase ACLO_RS06370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACLO_RS06375 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACLO_RS06385 PF04055 Radical SAM superfamily ACLO_RS06385 PF06969 HemN C-terminal domain ACLO_RS06390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACLO_RS06390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACLO_RS06395 PF00317 Ribonucleotide reductase, all-alpha domain ACLO_RS06395 PF02867 Ribonucleotide reductase, barrel domain ACLO_RS06395 PF03477 ATP cone domain ACLO_RS06410 PF00072 Response regulator receiver domain ACLO_RS06410 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS06415 PF08447 PAS fold ACLO_RS06415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS06420 PF00490 Delta-aminolevulinic acid dehydratase ACLO_RS06425 PF00925 GTP cyclohydrolase II ACLO_RS06430 PF02527 rRNA small subunit methyltransferase G ACLO_RS06450 PF02092 Glycyl-tRNA synthetase beta subunit ACLO_RS06460 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS06460 PF00072 Response regulator receiver domain ACLO_RS06470 PF16200 C-terminal region of band_7 ACLO_RS06470 PF01145 SPFH domain / Band 7 family ACLO_RS06510 PF01618 MotA/TolQ/ExbB proton channel family ACLO_RS06515 PF02472 Biopolymer transport protein ExbD/TolR ACLO_RS06530 PF13476 AAA domain ACLO_RS06540 PF01695 IstB-like ATP binding protein ACLO_RS06570 PF03737 Aldolase/RraA ACLO_RS06575 PF05971 RNA methyltransferase ACLO_RS06580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACLO_RS06585 PF00849 RNA pseudouridylate synthase ACLO_RS06585 PF01479 S4 domain ACLO_RS06595 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS06620 PF00593 TonB dependent receptor ACLO_RS06620 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS06625 PF01497 Periplasmic binding protein ACLO_RS06630 PF00005 ABC transporter ACLO_RS06635 PF01032 FecCD transport family ACLO_RS06660 PF00248 Aldo/keto reductase family ACLO_RS06665 PF08501 Shikimate dehydrogenase substrate binding domain ACLO_RS06670 PF08241 Methyltransferase domain ACLO_RS06680 PF00390 Malic enzyme, N-terminal domain ACLO_RS06680 PF03949 Malic enzyme, NAD binding domain ACLO_RS06680 PF01515 Phosphate acetyl/butaryl transferase ACLO_RS06685 PF00551 Formyl transferase ACLO_RS06685 PF01842 ACT domain ACLO_RS06690 PF00588 SpoU rRNA Methylase family ACLO_RS06710 PF00925 GTP cyclohydrolase II ACLO_RS06710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACLO_RS06720 PF01293 Phosphoenolpyruvate carboxykinase ACLO_RS06725 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ACLO_RS06730 PF00682 HMGL-like ACLO_RS06730 PF08502 LeuA allosteric (dimerisation) domain ACLO_RS06750 PF01588 Putative tRNA binding domain ACLO_RS06750 PF09334 tRNA synthetases class I (M) ACLO_RS06750 PF00133 tRNA synthetases class I (I, L, M and V) ACLO_RS06760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACLO_RS06785 PF02325 YGGT family ACLO_RS06790 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACLO_RS06795 PF05193 Peptidase M16 inactive domain ACLO_RS06800 PF04055 Radical SAM superfamily ACLO_RS06805 PF01103 Surface antigen ACLO_RS06805 PF07244 Surface antigen variable number repeat ACLO_RS06810 PF02153 Prephenate dehydrogenase ACLO_RS06810 PF01842 ACT domain ACLO_RS06815 PF00809 Pterin binding enzyme ACLO_RS06830 PF00696 Amino acid kinase family ACLO_RS06830 PF01842 ACT domain ACLO_RS06830 PF13840 ACT domain ACLO_RS06835 PF00293 NUDIX domain ACLO_RS06840 PF04055 Radical SAM superfamily ACLO_RS06840 PF06969 HemN C-terminal domain ACLO_RS06845 PF05175 Methyltransferase small domain ACLO_RS06845 PF17827 PrmC N-terminal domain ACLO_RS06850 PF01432 Peptidase family M3 ACLO_RS06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACLO_RS06870 PF03459 TOBE domain ACLO_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS06890 PF00005 ABC transporter ACLO_RS06890 PF08402 TOBE domain ACLO_RS06895 PF18644 Phage integrase SAM-like domain ACLO_RS06895 PF00589 Phage integrase family ACLO_RS06900 PF01339 CheB methylesterase ACLO_RS06900 PF00072 Response regulator receiver domain ACLO_RS06905 PF03975 CheD chemotactic sensory transduction ACLO_RS06910 PF01739 CheR methyltransferase, SAM binding domain ACLO_RS06910 PF03705 CheR methyltransferase, all-alpha domain ACLO_RS06915 PF09078 CheY binding ACLO_RS06915 PF01627 Hpt domain ACLO_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS06915 PF02895 Signal transducing histidine kinase, homodimeric domain ACLO_RS06915 PF01584 CheW-like domain ACLO_RS06920 PF00072 Response regulator receiver domain ACLO_RS06925 PF01138 3' exoribonuclease family, domain 1 ACLO_RS06925 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACLO_RS06925 PF00013 KH domain ACLO_RS06925 PF03725 3' exoribonuclease family, domain 2 ACLO_RS06925 PF00575 S1 RNA binding domain ACLO_RS06935 PF03968 OstA-like protein ACLO_RS06935 PF04453 LPS transport system D ACLO_RS06945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACLO_RS06945 PF02843 Phosphoribosylglycinamide synthetase, C domain ACLO_RS06945 PF02844 Phosphoribosylglycinamide synthetase, N domain ACLO_RS06955 PF00916 Sulfate permease family ACLO_RS06955 PF01740 STAS domain ACLO_RS06960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACLO_RS06960 PF01926 50S ribosome-binding GTPase ACLO_RS06965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACLO_RS06965 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ACLO_RS06970 PF01580 FtsK/SpoIIIE family ACLO_RS06970 PF09397 Ftsk gamma domain ACLO_RS06970 PF17854 FtsK alpha domain ACLO_RS06975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACLO_RS06975 PF00132 Bacterial transferase hexapeptide (six repeats) ACLO_RS06980 PF10369 Small subunit of acetolactate synthase ACLO_RS06985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACLO_RS06985 PF00205 Thiamine pyrophosphate enzyme, central domain ACLO_RS06985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACLO_RS06990 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS06990 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS06990 PF00563 EAL domain ACLO_RS07005 PF02541 Ppx/GppA phosphatase family ACLO_RS07015 PF01590 GAF domain ACLO_RS07015 PF00563 EAL domain ACLO_RS07015 PF00360 Phytochrome region ACLO_RS07015 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS07030 PF00085 Thioredoxin ACLO_RS07040 PF01171 PP-loop family ACLO_RS07050 PF03453 MoeA N-terminal region (domain I and II) ACLO_RS07050 PF03454 MoeA C-terminal region (domain IV) ACLO_RS07050 PF00994 Probable molybdopterin binding domain ACLO_RS07065 PF02646 RmuC family ACLO_RS07070 PF16491 CAAX prenyl protease N-terminal, five membrane helices ACLO_RS07070 PF01435 Peptidase family M48 ACLO_RS07080 PF03061 Thioesterase superfamily ACLO_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07090 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS07095 PF11849 Domain of unknown function (DUF3369) ACLO_RS07100 PF08447 PAS fold ACLO_RS07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS07105 PF02203 Tar ligand binding domain homologue ACLO_RS07105 PF00672 HAMP domain ACLO_RS07105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS07110 PF08447 PAS fold ACLO_RS07110 PF08448 PAS fold ACLO_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07115 PF00072 Response regulator receiver domain ACLO_RS07115 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS07120 PF00072 Response regulator receiver domain ACLO_RS07125 PF00672 HAMP domain ACLO_RS07125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS07125 PF00072 Response regulator receiver domain ACLO_RS07125 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07125 PF01627 Hpt domain ACLO_RS07130 PF00672 HAMP domain ACLO_RS07130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS07130 PF02203 Tar ligand binding domain homologue ACLO_RS07145 PF02417 Chromate transporter ACLO_RS07150 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACLO_RS07160 PF02040 Arsenical pump membrane protein ACLO_RS07165 PF01022 Bacterial regulatory protein, arsR family ACLO_RS07175 PF03738 Glutathionylspermidine synthase preATP-grasp ACLO_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07180 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS07180 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACLO_RS07185 PF13407 Periplasmic binding protein domain ACLO_RS07190 PF01966 HD domain ACLO_RS07205 PF01043 SecA preprotein cross-linking domain ACLO_RS07205 PF07517 SecA DEAD-like domain ACLO_RS07205 PF00271 Helicase conserved C-terminal domain ACLO_RS07205 PF02810 SEC-C motif ACLO_RS07205 PF07516 SecA Wing and Scaffold domain ACLO_RS07210 PF12704 MacB-like periplasmic core domain ACLO_RS07210 PF02687 FtsX-like permease family ACLO_RS07225 PF03971 Monomeric isocitrate dehydrogenase ACLO_RS07230 PF00056 lactate/malate dehydrogenase, NAD binding domain ACLO_RS07230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACLO_RS07240 PF02310 B12 binding domain ACLO_RS07245 PF06368 Methylaspartate mutase E chain (MutE) ACLO_RS07250 PF13941 MutL protein ACLO_RS07255 PF13193 AMP-binding enzyme C-terminal domain ACLO_RS07255 PF00501 AMP-binding enzyme ACLO_RS07285 PF00149 Calcineurin-like phosphoesterase ACLO_RS07295 PF00873 AcrB/AcrD/AcrF family ACLO_RS07305 PF01795 MraW methylase family ACLO_RS07315 PF00216 Bacterial DNA-binding protein ACLO_RS07330 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACLO_RS07330 PF01266 FAD dependent oxidoreductase ACLO_RS07340 PF00072 Response regulator receiver domain ACLO_RS07350 PF08447 PAS fold ACLO_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07350 PF08448 PAS fold ACLO_RS07355 PF01556 DnaJ C terminal domain ACLO_RS07355 PF00226 DnaJ domain ACLO_RS07360 PF13411 MerR HTH family regulatory protein ACLO_RS07365 PF00589 Phage integrase family ACLO_RS07365 PF02899 Phage integrase, N-terminal SAM-like domain ACLO_RS07435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACLO_RS07435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACLO_RS07435 PF02142 MGS-like domain ACLO_RS07440 PF01810 LysE type translocator ACLO_RS07445 PF00899 ThiF family ACLO_RS07450 PF00563 EAL domain ACLO_RS07450 PF12792 CSS motif domain associated with EAL ACLO_RS07455 PF01522 Polysaccharide deacetylase ACLO_RS07460 PF00939 Sodium:sulfate symporter transmembrane region ACLO_RS07465 PF00994 Probable molybdopterin binding domain ACLO_RS07475 PF01434 Peptidase family M41 ACLO_RS07475 PF17862 AAA+ lid domain ACLO_RS07475 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS07480 PF00919 Uncharacterized protein family UPF0004 ACLO_RS07480 PF04055 Radical SAM superfamily ACLO_RS07490 PF01761 3-dehydroquinate synthase ACLO_RS07495 PF00270 DEAD/DEAH box helicase ACLO_RS07495 PF00271 Helicase conserved C-terminal domain ACLO_RS07500 PF00762 Ferrochelatase ACLO_RS07515 PF07568 Histidine kinase ACLO_RS07515 PF12282 Signal transduction histidine kinase ACLO_RS07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07530 PF00072 Response regulator receiver domain ACLO_RS07530 PF04397 LytTr DNA-binding domain ACLO_RS07535 PF06580 Histidine kinase ACLO_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07535 PF07694 5TMR of 5TMR-LYT ACLO_RS07540 PF01850 PIN domain ACLO_RS07575 PF00669 Bacterial flagellin N-terminal helical region ACLO_RS07575 PF00700 Bacterial flagellin C-terminal helical region ACLO_RS07575 PF00669 Bacterial flagellin N-terminal helical region ACLO_RS07575 PF07196 Flagellin hook IN motif ACLO_RS07575 PF00700 Bacterial flagellin C-terminal helical region ACLO_RS07575 PF07196 Flagellin hook IN motif ACLO_RS07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07595 PF00072 Response regulator receiver domain ACLO_RS07595 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS07615 PF00664 ABC transporter transmembrane region ACLO_RS07615 PF00005 ABC transporter ACLO_RS07620 PF01594 AI-2E family transporter ACLO_RS07630 PF00563 EAL domain ACLO_RS07630 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS07630 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS07635 PF00085 Thioredoxin ACLO_RS07640 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACLO_RS07640 PF00578 AhpC/TSA family ACLO_RS07645 PF01627 Hpt domain ACLO_RS07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07645 PF00072 Response regulator receiver domain ACLO_RS07645 PF00672 HAMP domain ACLO_RS07645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS07645 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS07655 PF00933 Glycosyl hydrolase family 3 N terminal domain ACLO_RS07655 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACLO_RS07675 PF00072 Response regulator receiver domain ACLO_RS07675 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS07680 PF02652 L-lactate permease ACLO_RS07685 PF00684 DnaJ central domain ACLO_RS07685 PF01556 DnaJ C terminal domain ACLO_RS07685 PF00226 DnaJ domain ACLO_RS07715 PF00158 Sigma-54 interaction domain ACLO_RS07715 PF00072 Response regulator receiver domain ACLO_RS07720 PF00072 Response regulator receiver domain ACLO_RS07720 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS07720 PF01627 Hpt domain ACLO_RS07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACLO_RS07730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACLO_RS07735 PF00571 CBS domain ACLO_RS07735 PF00478 IMP dehydrogenase / GMP reductase domain ACLO_RS07740 PF01425 Amidase ACLO_RS07745 PF01196 Ribosomal protein L17 ACLO_RS07750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACLO_RS07750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACLO_RS07750 PF01000 RNA polymerase Rpb3/RpoA insert domain ACLO_RS07755 PF00163 Ribosomal protein S4/S9 N-terminal domain ACLO_RS07755 PF01479 S4 domain ACLO_RS07760 PF00411 Ribosomal protein S11 ACLO_RS07765 PF00416 Ribosomal protein S13/S18 ACLO_RS07770 PF00444 Ribosomal protein L36 ACLO_RS07785 PF00180 Isocitrate/isopropylmalate dehydrogenase ACLO_RS07790 PF00694 Aconitase C-terminal domain ACLO_RS07795 PF04539 Sigma-70 region 3 ACLO_RS07795 PF00140 Sigma-70 factor, region 1.2 ACLO_RS07795 PF04542 Sigma-70 region 2 ACLO_RS07795 PF04545 Sigma-70, region 4 ACLO_RS07815 PF06865 Pyrimidine/purine nucleoside phosphorylase ACLO_RS07820 PF00202 Aminotransferase class-III ACLO_RS07845 PF01098 Cell cycle protein ACLO_RS07850 PF00849 RNA pseudouridylate synthase ACLO_RS07850 PF01479 S4 domain ACLO_RS07855 PF02903 Alpha amylase, N-terminal ig-like domain ACLO_RS07855 PF00128 Alpha amylase, catalytic domain ACLO_RS07860 PF02390 Putative methyltransferase ACLO_RS07865 PF00005 ABC transporter ACLO_RS07880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACLO_RS07890 PF12848 ABC transporter ACLO_RS07890 PF16326 ABC transporter C-terminal domain ACLO_RS07890 PF00005 ABC transporter ACLO_RS07905 PF00176 SNF2 family N-terminal domain ACLO_RS07905 PF00271 Helicase conserved C-terminal domain ACLO_RS07920 PF14602 Hexapeptide repeat of succinyl-transferase ACLO_RS07920 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ACLO_RS07925 PF00270 DEAD/DEAH box helicase ACLO_RS07925 PF00271 Helicase conserved C-terminal domain ACLO_RS07925 PF18074 Primosomal protein N C-terminal domain ACLO_RS07925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACLO_RS07950 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ACLO_RS07955 PF00586 AIR synthase related protein, N-terminal domain ACLO_RS07955 PF02769 AIR synthase related protein, C-terminal domain ACLO_RS07975 PF01924 Hydrogenase formation hypA family ACLO_RS07980 PF01455 HupF/HypC family ACLO_RS07985 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACLO_RS07990 PF00005 ABC transporter ACLO_RS08005 PF01891 Cobalt uptake substrate-specific transmembrane region ACLO_RS08015 PF00672 HAMP domain ACLO_RS08015 PF02203 Tar ligand binding domain homologue ACLO_RS08015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS08040 PF12823 Domain of unknown function (DUF3817) ACLO_RS08050 PF02926 THUMP domain ACLO_RS08050 PF02568 Thiamine biosynthesis protein (ThiI) ACLO_RS08075 PF03471 Transporter associated domain ACLO_RS08075 PF00999 Sodium/hydrogen exchanger family ACLO_RS08075 PF02080 TrkA-C domain ACLO_RS08085 PF07556 Protein of unknown function (DUF1538) ACLO_RS08090 PF00571 CBS domain ACLO_RS08110 PF07503 HypF finger ACLO_RS08110 PF01300 Telomere recombination ACLO_RS08110 PF00708 Acylphosphatase ACLO_RS08110 PF17788 HypF Kae1-like domain ACLO_RS08120 PF01750 Hydrogenase maturation protease ACLO_RS08125 PF01292 Prokaryotic cytochrome b561 ACLO_RS08130 PF00374 Nickel-dependent hydrogenase ACLO_RS08135 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACLO_RS08135 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ACLO_RS08135 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACLO_RS08140 PF00374 Nickel-dependent hydrogenase ACLO_RS08145 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ACLO_RS08145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACLO_RS08150 PF00440 Bacterial regulatory proteins, tetR family ACLO_RS08150 PF18665 Tetracyclin repressor-like, C-terminal domain ACLO_RS08155 PF06434 Aconitate hydratase 2 N-terminus ACLO_RS08155 PF00330 Aconitase family (aconitate hydratase) ACLO_RS08155 PF11791 Aconitate B N-terminal domain ACLO_RS08165 PF00360 Phytochrome region ACLO_RS08165 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS08165 PF01590 GAF domain ACLO_RS08165 PF00563 EAL domain ACLO_RS08180 PF00501 AMP-binding enzyme ACLO_RS08185 PF02803 Thiolase, C-terminal domain ACLO_RS08185 PF00108 Thiolase, N-terminal domain ACLO_RS08190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACLO_RS08190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACLO_RS08190 PF00378 Enoyl-CoA hydratase/isomerase ACLO_RS08195 PF02770 Acyl-CoA dehydrogenase, middle domain ACLO_RS08195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACLO_RS08195 PF09317 Domain of unknown function (DUF1974) ACLO_RS08195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACLO_RS08235 PF01695 IstB-like ATP binding protein ACLO_RS08250 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS08250 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS08250 PF00563 EAL domain ACLO_RS08270 PF01709 Transcriptional regulator ACLO_RS08275 PF01551 Peptidase family M23 ACLO_RS08280 PF04333 MlaA lipoprotein ACLO_RS08295 PF03641 Possible lysine decarboxylase ACLO_RS08300 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS08325 PF02600 Disulfide bond formation protein DsbB ACLO_RS08345 PF02028 BCCT, betaine/carnitine/choline family transporter ACLO_RS08350 PF07690 Major Facilitator Superfamily ACLO_RS08370 PF00464 Serine hydroxymethyltransferase ACLO_RS08375 PF02805 Metal binding domain of Ada ACLO_RS08375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACLO_RS08375 PF12833 Helix-turn-helix domain ACLO_RS08375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACLO_RS08385 PF03062 MBOAT, membrane-bound O-acyltransferase family ACLO_RS08395 PF01263 Aldose 1-epimerase ACLO_RS08400 PF00905 Penicillin binding protein transpeptidase domain ACLO_RS08405 PF00271 Helicase conserved C-terminal domain ACLO_RS08405 PF00270 DEAD/DEAH box helicase ACLO_RS08410 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ACLO_RS08410 PF18381 YcaO cyclodehydratase C-terminal domain ACLO_RS08430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS08430 PF02203 Tar ligand binding domain homologue ACLO_RS08430 PF00672 HAMP domain ACLO_RS08440 PF00075 RNase H ACLO_RS08445 PF00682 HMGL-like ACLO_RS08445 PF07836 DmpG-like communication domain ACLO_RS08460 PF11799 impB/mucB/samB family C-terminal domain ACLO_RS08460 PF11798 IMS family HHH motif ACLO_RS08460 PF00817 impB/mucB/samB family ACLO_RS08470 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS08470 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ACLO_RS08470 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACLO_RS08485 PF00005 ABC transporter ACLO_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS08495 PF12849 PBP superfamily domain ACLO_RS08500 PF03453 MoeA N-terminal region (domain I and II) ACLO_RS08500 PF00994 Probable molybdopterin binding domain ACLO_RS08500 PF03454 MoeA C-terminal region (domain IV) ACLO_RS08510 PF03459 TOBE domain ACLO_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACLO_RS08520 PF02634 FdhD/NarQ family ACLO_RS08530 PF13247 4Fe-4S dicluster domain ACLO_RS08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08560 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08565 PF00158 Sigma-54 interaction domain ACLO_RS08565 PF00072 Response regulator receiver domain ACLO_RS08565 PF02954 Bacterial regulatory protein, Fis family ACLO_RS08580 PF01022 Bacterial regulatory protein, arsR family ACLO_RS08605 PF17863 AAA lid domain ACLO_RS08605 PF07726 ATPase family associated with various cellular activities (AAA) ACLO_RS08610 PF01882 Protein of unknown function DUF58 ACLO_RS08625 PF13519 von Willebrand factor type A domain ACLO_RS08645 PF01841 Transglutaminase-like superfamily ACLO_RS08650 PF02769 AIR synthase related protein, C-terminal domain ACLO_RS08650 PF00586 AIR synthase related protein, N-terminal domain ACLO_RS08660 PF03841 L-seryl-tRNA selenium transferase ACLO_RS08665 PF00009 Elongation factor Tu GTP binding domain ACLO_RS08665 PF03144 Elongation factor Tu domain 2 ACLO_RS08665 PF09107 Elongation factor SelB, winged helix ACLO_RS08665 PF09105 Elongation factor SelB, winged helix ACLO_RS08665 PF09106 Elongation factor SelB, winged helix ACLO_RS08670 PF13361 UvrD-like helicase C-terminal domain ACLO_RS08670 PF00580 UvrD/REP helicase N-terminal domain ACLO_RS08690 PF00158 Sigma-54 interaction domain ACLO_RS08690 PF00072 Response regulator receiver domain ACLO_RS08695 PF00072 Response regulator receiver domain ACLO_RS08700 PF01627 Hpt domain ACLO_RS08700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS08700 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08700 PF00672 HAMP domain ACLO_RS08700 PF00072 Response regulator receiver domain ACLO_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08705 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08705 PF01627 Hpt domain ACLO_RS08705 PF00672 HAMP domain ACLO_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS08705 PF00072 Response regulator receiver domain ACLO_RS08710 PF00072 Response regulator receiver domain ACLO_RS08715 PF00672 HAMP domain ACLO_RS08715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08715 PF01627 Hpt domain ACLO_RS08715 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08715 PF00072 Response regulator receiver domain ACLO_RS08750 PF08448 PAS fold ACLO_RS08750 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS08750 PF00563 EAL domain ACLO_RS08770 PF01502 Phosphoribosyl-AMP cyclohydrolase ACLO_RS08775 PF04909 Amidohydrolase ACLO_RS08780 PF01242 6-pyruvoyl tetrahydropterin synthase ACLO_RS08790 PF01966 HD domain ACLO_RS08795 PF01243 Pyridoxamine 5'-phosphate oxidase ACLO_RS08795 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACLO_RS08810 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS08810 PF00563 EAL domain ACLO_RS08810 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS08815 PF00270 DEAD/DEAH box helicase ACLO_RS08815 PF00271 Helicase conserved C-terminal domain ACLO_RS08815 PF03880 DbpA RNA binding domain ACLO_RS08830 PF00563 EAL domain ACLO_RS08840 PF02626 Carboxyltransferase domain, subdomain A and B ACLO_RS08850 PF03746 LamB/YcsF family ACLO_RS08875 PF00005 ABC transporter ACLO_RS08880 PF13533 Biotin-lipoyl like ACLO_RS08890 PF01384 Phosphate transporter family ACLO_RS08905 PF00183 Hsp90 protein ACLO_RS08910 PF00230 Major intrinsic protein ACLO_RS08915 PF00141 Peroxidase ACLO_RS08925 PF00072 Response regulator receiver domain ACLO_RS08925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACLO_RS08925 PF01627 Hpt domain ACLO_RS08925 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08925 PF00672 HAMP domain ACLO_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08930 PF00072 Response regulator receiver domain ACLO_RS08945 PF04403 Paraquat-inducible protein A ACLO_RS08960 PF00563 EAL domain ACLO_RS08960 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS08960 PF08448 PAS fold ACLO_RS08970 PF02702 Osmosensitive K+ channel His kinase sensor domain ACLO_RS08970 PF13493 Domain of unknown function (DUF4118) ACLO_RS08970 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS08975 PF00072 Response regulator receiver domain ACLO_RS08975 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS08980 PF02386 Cation transport protein ACLO_RS08985 PF02254 TrkA-N domain ACLO_RS08985 PF02080 TrkA-C domain ACLO_RS09000 PF05088 Bacterial NAD-glutamate dehydrogenase ACLO_RS09005 PF04073 Aminoacyl-tRNA editing domain ACLO_RS09010 PF08713 DNA alkylation repair enzyme ACLO_RS09020 PF00491 Arginase family ACLO_RS09025 PF08502 LeuA allosteric (dimerisation) domain ACLO_RS09025 PF00682 HMGL-like ACLO_RS09030 PF12833 Helix-turn-helix domain ACLO_RS09035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACLO_RS09035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACLO_RS09040 PF01368 DHH family ACLO_RS09040 PF02833 DHHA2 domain ACLO_RS09050 PF10415 Fumarase C C-terminus ACLO_RS09050 PF00206 Lyase ACLO_RS09055 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS09055 PF00072 Response regulator receiver domain ACLO_RS09060 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS09060 PF02743 Cache domain ACLO_RS09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS09065 PF01235 Sodium:alanine symporter family ACLO_RS09070 PF01048 Phosphorylase superfamily ACLO_RS09075 PF00698 Acyl transferase domain ACLO_RS09080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACLO_RS09090 PF01389 OmpA-like transmembrane domain ACLO_RS09090 PF00691 OmpA family ACLO_RS09095 PF00210 Ferritin-like domain ACLO_RS09100 PF04052 TolB amino-terminal domain ACLO_RS09110 PF02472 Biopolymer transport protein ExbD/TolR ACLO_RS09115 PF01618 MotA/TolQ/ExbB proton channel family ACLO_RS09120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACLO_RS09125 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACLO_RS09125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACLO_RS09130 PF00231 ATP synthase ACLO_RS09135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACLO_RS09135 PF00306 ATP synthase alpha/beta chain, C terminal domain ACLO_RS09135 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACLO_RS09140 PF00213 ATP synthase delta (OSCP) subunit ACLO_RS09145 PF00430 ATP synthase B/B' CF(0) ACLO_RS09155 PF02195 ParB-like nuclease domain ACLO_RS09155 PF17762 HTH domain found in ParB protein ACLO_RS09160 PF13614 AAA domain ACLO_RS09165 PF02237 Biotin protein ligase C terminal domain ACLO_RS09165 PF03099 Biotin/lipoate A/B protein ligase family ACLO_RS09165 PF08279 HTH domain ACLO_RS09175 PF00551 Formyl transferase ACLO_RS09175 PF02911 Formyl transferase, C-terminal domain ACLO_RS09180 PF00696 Amino acid kinase family ACLO_RS09185 PF01926 50S ribosome-binding GTPase ACLO_RS09185 PF01018 GTP1/OBG ACLO_RS09190 PF01016 Ribosomal L27 protein ACLO_RS09195 PF00829 Ribosomal prokaryotic L21 protein ACLO_RS09200 PF01042 Endoribonuclease L-PSP ACLO_RS09205 PF08275 DNA primase catalytic core, N-terminal domain ACLO_RS09205 PF16730 DnaG-primase C-terminal, helicase-binding domain ACLO_RS09205 PF01807 CHC2 zinc finger ACLO_RS09205 PF13662 Toprim domain ACLO_RS09215 PF00035 Double-stranded RNA binding motif ACLO_RS09215 PF14622 Ribonuclease-III-like ACLO_RS09220 PF01264 Chorismate synthase ACLO_RS09230 PF01435 Peptidase family M48 ACLO_RS09235 PF00300 Histidine phosphatase superfamily (branch 1) ACLO_RS09245 PF10396 GTP-binding protein TrmE N-terminus ACLO_RS09245 PF12631 MnmE helical domain ACLO_RS09245 PF01926 50S ribosome-binding GTPase ACLO_RS09255 PF14849 YidC periplasmic domain ACLO_RS09255 PF02096 60Kd inner membrane protein ACLO_RS09260 PF01809 Putative membrane protein insertion efficiency factor ACLO_RS09265 PF00825 Ribonuclease P ACLO_RS09270 PF00468 Ribosomal protein L34 ACLO_RS09275 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS09275 PF17871 AAA lid domain ACLO_RS09275 PF02861 Clp amino terminal domain, pathogenicity island component ACLO_RS09275 PF10431 C-terminal, D2-small domain, of ClpB protein ACLO_RS09275 PF07724 AAA domain (Cdc48 subfamily) ACLO_RS09280 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS09280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS09290 PF01351 Ribonuclease HII ACLO_RS09305 PF01625 Peptide methionine sulfoxide reductase ACLO_RS09310 PF01641 SelR domain ACLO_RS09315 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACLO_RS09325 PF13344 Haloacid dehalogenase-like hydrolase ACLO_RS09325 PF00293 NUDIX domain ACLO_RS09335 PF09308 LuxQ, periplasmic ACLO_RS09335 PF00072 Response regulator receiver domain ACLO_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS09335 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS09340 PF00072 Response regulator receiver domain ACLO_RS09345 PF00072 Response regulator receiver domain ACLO_RS09345 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS09355 PF02416 mttA/Hcf106 family ACLO_RS09365 PF02355 Protein export membrane protein ACLO_RS09370 PF02355 Protein export membrane protein ACLO_RS09370 PF07549 SecD/SecF GG Motif ACLO_RS09375 PF03741 Integral membrane protein TerC family ACLO_RS09380 PF01522 Polysaccharide deacetylase ACLO_RS09385 PF02203 Tar ligand binding domain homologue ACLO_RS09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS09385 PF00672 HAMP domain ACLO_RS09390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS09390 PF02203 Tar ligand binding domain homologue ACLO_RS09390 PF00672 HAMP domain ACLO_RS09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS09395 PF02203 Tar ligand binding domain homologue ACLO_RS09395 PF00672 HAMP domain ACLO_RS09400 PF00255 Glutathione peroxidase ACLO_RS09405 PF04973 Nicotinamide mononucleotide transporter ACLO_RS09415 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS09415 PF17158 Membrane-associated sensor, integral membrane domain ACLO_RS09420 PF01541 GIY-YIG catalytic domain ACLO_RS09420 PF02151 UvrB/uvrC motif ACLO_RS09420 PF08459 UvrC Helix-hairpin-helix N-terminal ACLO_RS09425 PF01168 Alanine racemase, N-terminal domain ACLO_RS09425 PF00842 Alanine racemase, C-terminal domain ACLO_RS09440 PF00202 Aminotransferase class-III ACLO_RS09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS09445 PF08447 PAS fold ACLO_RS09445 PF08448 PAS fold ACLO_RS09450 PF02142 MGS-like domain ACLO_RS09450 PF01808 AICARFT/IMPCHase bienzyme ACLO_RS09455 PF02769 AIR synthase related protein, C-terminal domain ACLO_RS09455 PF00586 AIR synthase related protein, N-terminal domain ACLO_RS09455 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACLO_RS09465 PF01476 LysM domain ACLO_RS09465 PF01551 Peptidase family M23 ACLO_RS09465 PF08525 Opacity-associated protein A N-terminal motif ACLO_RS09475 PF00583 Acetyltransferase (GNAT) family ACLO_RS09480 PF00202 Aminotransferase class-III ACLO_RS09485 PF06339 Ectoine synthase ACLO_RS09490 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ACLO_RS09495 PF00696 Amino acid kinase family ACLO_RS09495 PF13840 ACT domain ACLO_RS09500 PF01227 GTP cyclohydrolase I ACLO_RS09505 PF01544 CorA-like Mg2+ transporter protein ACLO_RS09510 PF00482 Type II secretion system (T2SS), protein F ACLO_RS09515 PF00437 Type II/IV secretion system protein ACLO_RS09530 PF01926 50S ribosome-binding GTPase ACLO_RS09530 PF07650 KH domain ACLO_RS09535 PF01078 Magnesium chelatase, subunit ChlI ACLO_RS09535 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACLO_RS09545 PF01327 Polypeptide deformylase ACLO_RS09550 PF00574 Clp protease ACLO_RS09555 PF05698 Bacterial trigger factor protein (TF) C-terminus ACLO_RS09555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACLO_RS09555 PF05697 Bacterial trigger factor protein (TF) ACLO_RS09560 PF13519 von Willebrand factor type A domain ACLO_RS09565 PF03976 Polyphosphate kinase 2 (PPK2) ACLO_RS09570 PF03976 Polyphosphate kinase 2 (PPK2) ACLO_RS09575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACLO_RS09580 PF00301 Rubredoxin ACLO_RS09585 PF03435 Saccharopine dehydrogenase NADP binding domain ACLO_RS09585 PF16653 Saccharopine dehydrogenase C-terminal domain ACLO_RS09595 PF13356 Arm DNA-binding domain ACLO_RS09595 PF14659 Phage integrase, N-terminal SAM-like domain ACLO_RS09595 PF00589 Phage integrase family ACLO_RS09600 PF02810 SEC-C motif ACLO_RS09600 PF07516 SecA Wing and Scaffold domain ACLO_RS09600 PF01043 SecA preprotein cross-linking domain ACLO_RS09600 PF07517 SecA DEAD-like domain ACLO_RS09670 PF01695 IstB-like ATP binding protein ACLO_RS09785 PF07152 YaeQ protein ACLO_RS09805 PF01053 Cys/Met metabolism PLP-dependent enzyme ACLO_RS09810 PF01053 Cys/Met metabolism PLP-dependent enzyme ACLO_RS09825 PF00072 Response regulator receiver domain ACLO_RS09825 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS09830 PF00583 Acetyltransferase (GNAT) family ACLO_RS09840 PF03824 High-affinity nickel-transport protein ACLO_RS09855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACLO_RS09855 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACLO_RS09855 PF13244 Domain of unknown function (DUF4040) ACLO_RS09855 PF00361 Proton-conducting membrane transporter ACLO_RS09860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACLO_RS09865 PF00361 Proton-conducting membrane transporter ACLO_RS09870 PF01899 Na+/H+ ion antiporter subunit ACLO_RS09875 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACLO_RS09890 PF08448 PAS fold ACLO_RS09890 PF08447 PAS fold ACLO_RS09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS09895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACLO_RS09900 PF02203 Tar ligand binding domain homologue ACLO_RS09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS09900 PF00672 HAMP domain ACLO_RS09905 PF12792 CSS motif domain associated with EAL ACLO_RS09905 PF00563 EAL domain ACLO_RS09910 PF00005 ABC transporter ACLO_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS09920 PF00005 ABC transporter ACLO_RS09925 PF04324 BFD-like [2Fe-2S] binding domain ACLO_RS09925 PF01568 Molydopterin dinucleotide binding domain ACLO_RS09925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACLO_RS09925 PF00384 Molybdopterin oxidoreductase ACLO_RS09930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS09930 PF04324 BFD-like [2Fe-2S] binding domain ACLO_RS09930 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACLO_RS09930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACLO_RS09930 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACLO_RS09945 PF03150 Di-haem cytochrome c peroxidase ACLO_RS09950 PF04116 Fatty acid hydroxylase superfamily ACLO_RS09980 PF00137 ATP synthase subunit C ACLO_RS09985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS09985 PF00672 HAMP domain ACLO_RS09985 PF02743 Cache domain ACLO_RS10130 PF02899 Phage integrase, N-terminal SAM-like domain ACLO_RS10130 PF00589 Phage integrase family ACLO_RS10140 PF02899 Phage integrase, N-terminal SAM-like domain ACLO_RS10140 PF00589 Phage integrase family ACLO_RS10145 PF00924 Mechanosensitive ion channel ACLO_RS10170 PF00171 Aldehyde dehydrogenase family ACLO_RS10185 PF13746 4Fe-4S dicluster domain ACLO_RS10185 PF12801 4Fe-4S binding domain ACLO_RS10185 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ACLO_RS10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS10190 PF00989 PAS fold ACLO_RS10190 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS10190 PF08447 PAS fold ACLO_RS10195 PF00072 Response regulator receiver domain ACLO_RS10195 PF12833 Helix-turn-helix domain ACLO_RS10205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACLO_RS10205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACLO_RS10205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACLO_RS10205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACLO_RS10235 PF00258 Flavodoxin ACLO_RS10240 PF01475 Ferric uptake regulator family ACLO_RS10250 PF07664 Ferrous iron transport protein B C terminus ACLO_RS10250 PF02421 Ferrous iron transport protein B ACLO_RS10250 PF07670 Nucleoside recognition ACLO_RS10265 PF04376 Arginine-tRNA-protein transferase, N terminus ACLO_RS10265 PF04377 Arginine-tRNA-protein transferase, C terminus ACLO_RS10270 PF00290 Tryptophan synthase alpha chain ACLO_RS10275 PF02548 Ketopantoate hydroxymethyltransferase ACLO_RS10280 PF17864 RuvB AAA lid domain ACLO_RS10280 PF05491 RuvB C-terminal winged helix domain ACLO_RS10280 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACLO_RS10285 PF01594 AI-2E family transporter ACLO_RS10295 PF09905 DNA-binding protein VF530 ACLO_RS10325 PF01695 IstB-like ATP binding protein ACLO_RS10350 PF04055 Radical SAM superfamily ACLO_RS10355 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACLO_RS10365 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACLO_RS10365 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACLO_RS10370 PF03989 DNA gyrase C-terminal domain, beta-propeller ACLO_RS10370 PF00521 DNA gyrase/topoisomerase IV, subunit A ACLO_RS10380 PF01960 ArgJ family ACLO_RS10390 PF00830 Ribosomal L28 family ACLO_RS10400 PF08645 Polynucleotide kinase 3 phosphatase ACLO_RS10405 PF01370 NAD dependent epimerase/dehydratase family ACLO_RS10410 PF01467 Cytidylyltransferase-like ACLO_RS10410 PF00294 pfkB family carbohydrate kinase ACLO_RS10415 PF13580 SIS domain ACLO_RS10420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACLO_RS10435 PF00535 Glycosyl transferase family 2 ACLO_RS10450 PF13439 Glycosyltransferase Family 4 ACLO_RS10450 PF00534 Glycosyl transferases group 1 ACLO_RS10455 PF00535 Glycosyl transferase family 2 ACLO_RS10470 PF00535 Glycosyl transferase family 2 ACLO_RS10475 PF16363 GDP-mannose 4,6 dehydratase ACLO_RS10485 PF04321 RmlD substrate binding domain ACLO_RS10490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACLO_RS10495 PF00483 Nucleotidyl transferase ACLO_RS10515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACLO_RS10520 PF02541 Ppx/GppA phosphatase family ACLO_RS10525 PF00037 4Fe-4S binding domain ACLO_RS10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS10535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACLO_RS10540 PF01645 Conserved region in glutamate synthase ACLO_RS10540 PF01493 GXGXG motif ACLO_RS10540 PF00310 Glutamine amidotransferases class-II ACLO_RS10540 PF04898 Glutamate synthase central domain ACLO_RS10545 PF03009 Glycerophosphoryl diester phosphodiesterase family ACLO_RS10575 PF08447 PAS fold ACLO_RS10575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS10575 PF08448 PAS fold ACLO_RS10610 PF02719 Polysaccharide biosynthesis protein ACLO_RS10615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACLO_RS10620 PF00953 Glycosyl transferase family 4 ACLO_RS10635 PF01850 PIN domain ACLO_RS10660 PF01370 NAD dependent epimerase/dehydratase family ACLO_RS10670 PF01370 NAD dependent epimerase/dehydratase family ACLO_RS10685 PF00535 Glycosyl transferase family 2 ACLO_RS10695 PF00535 Glycosyl transferase family 2 ACLO_RS10705 PF00132 Bacterial transferase hexapeptide (six repeats) ACLO_RS10720 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS10725 PF02348 Cytidylyltransferase ACLO_RS10740 PF16363 GDP-mannose 4,6 dehydratase ACLO_RS10755 PF04321 RmlD substrate binding domain ACLO_RS10760 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACLO_RS10765 PF00483 Nucleotidyl transferase ACLO_RS10770 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACLO_RS10775 PF01029 NusB family ACLO_RS10780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACLO_RS10815 PF00793 DAHP synthetase I family ACLO_RS10835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACLO_RS10850 PF03958 Bacterial type II/III secretion system short domain ACLO_RS10850 PF00263 Bacterial type II and III secretion system protein ACLO_RS10855 PF01205 Uncharacterized protein family UPF0029 ACLO_RS10855 PF09186 Domain of unknown function (DUF1949) ACLO_RS10860 PF01479 S4 domain ACLO_RS10860 PF01728 FtsJ-like methyltransferase ACLO_RS10865 PF01687 Riboflavin kinase ACLO_RS10865 PF06574 FAD synthetase ACLO_RS10870 PF13649 Methyltransferase domain ACLO_RS10875 PF00578 AhpC/TSA family ACLO_RS10885 PF01565 FAD binding domain ACLO_RS10885 PF02913 FAD linked oxidases, C-terminal domain ACLO_RS10890 PF03631 Virulence factor BrkB ACLO_RS10930 PF07724 AAA domain (Cdc48 subfamily) ACLO_RS10930 PF17871 AAA lid domain ACLO_RS10930 PF02861 Clp amino terminal domain, pathogenicity island component ACLO_RS10930 PF10431 C-terminal, D2-small domain, of ClpB protein ACLO_RS10930 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS10935 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACLO_RS10950 PF00501 AMP-binding enzyme ACLO_RS10950 PF13193 AMP-binding enzyme C-terminal domain ACLO_RS10955 PF01575 MaoC like domain ACLO_RS10975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS10975 PF00672 HAMP domain ACLO_RS10975 PF02203 Tar ligand binding domain homologue ACLO_RS10980 PF01741 Large-conductance mechanosensitive channel, MscL ACLO_RS10985 PF01613 Flavin reductase like domain ACLO_RS11015 PF00771 FHIPEP family ACLO_RS11020 PF00700 Bacterial flagellin C-terminal helical region ACLO_RS11020 PF00669 Bacterial flagellin N-terminal helical region ACLO_RS11025 PF18269 T3SS EscN ATPase C-terminal domain ACLO_RS11025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACLO_RS11035 PF01312 FlhB HrpN YscU SpaS Family ACLO_RS11050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS11050 PF00460 Flagella basal body rod protein ACLO_RS11055 PF02049 Flagellar hook-basal body complex protein FliE ACLO_RS11065 PF10609 NUBPL iron-transfer P-loop NTPase ACLO_RS11070 PF00448 SRP54-type protein, GTPase domain ACLO_RS11095 PF01618 MotA/TolQ/ExbB proton channel family ACLO_RS11100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACLO_RS11120 PF00460 Flagella basal body rod protein ACLO_RS11120 PF07559 Flagellar basal body protein FlaE ACLO_RS11120 PF07196 Flagellin hook IN motif ACLO_RS11120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS11125 PF00460 Flagella basal body rod protein ACLO_RS11125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS11135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACLO_RS11145 PF14842 FliG N-terminal domain ACLO_RS11145 PF01706 FliG C-terminal domain ACLO_RS11145 PF14841 FliG middle domain ACLO_RS11150 PF08345 Flagellar M-ring protein C-terminal ACLO_RS11150 PF01514 Secretory protein of YscJ/FliF family ACLO_RS11155 PF00460 Flagella basal body rod protein ACLO_RS11160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS11160 PF00460 Flagella basal body rod protein ACLO_RS11170 PF00072 Response regulator receiver domain ACLO_RS11175 PF00460 Flagella basal body rod protein ACLO_RS11175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACLO_RS11190 PF01782 RimM N-terminal domain ACLO_RS11200 PF00886 Ribosomal protein S16 ACLO_RS11205 PF02978 Signal peptide binding domain ACLO_RS11205 PF02881 SRP54-type protein, helical bundle domain ACLO_RS11205 PF00448 SRP54-type protein, GTPase domain ACLO_RS11210 PF00849 RNA pseudouridylate synthase ACLO_RS11215 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACLO_RS11215 PF00534 Glycosyl transferases group 1 ACLO_RS11225 PF01784 NIF3 (NGG1p interacting factor 3) ACLO_RS11230 PF02091 Glycyl-tRNA synthetase alpha subunit ACLO_RS11240 PF00731 AIR carboxylase ACLO_RS11255 PF17200 Single Cache domain 2 ACLO_RS11255 PF00672 HAMP domain ACLO_RS11255 PF00672 HAMP domain ACLO_RS11255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS11255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS11255 PF17200 Single Cache domain 2 ACLO_RS11260 PF13476 AAA domain ACLO_RS11265 PF01513 ATP-NAD kinase ACLO_RS11270 PF14492 Elongation Factor G, domain II ACLO_RS11270 PF03764 Elongation factor G, domain IV ACLO_RS11270 PF00009 Elongation factor Tu GTP binding domain ACLO_RS11270 PF00679 Elongation factor G C-terminus ACLO_RS11270 PF03144 Elongation factor Tu domain 2 ACLO_RS11275 PF00177 Ribosomal protein S7p/S5e ACLO_RS11280 PF00164 Ribosomal protein S12/S23 ACLO_RS11340 PF02384 N-6 DNA Methylase ACLO_RS11340 PF12161 HsdM N-terminal domain ACLO_RS11345 PF08448 PAS fold ACLO_RS11345 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS11375 PF00149 Calcineurin-like phosphoesterase ACLO_RS11395 PF03432 Relaxase/Mobilisation nuclease domain ACLO_RS11430 PF13356 Arm DNA-binding domain ACLO_RS11430 PF00589 Phage integrase family ACLO_RS11445 PF04997 RNA polymerase Rpb1, domain 1 ACLO_RS11445 PF00623 RNA polymerase Rpb1, domain 2 ACLO_RS11445 PF05000 RNA polymerase Rpb1, domain 4 ACLO_RS11445 PF04998 RNA polymerase Rpb1, domain 5 ACLO_RS11445 PF04983 RNA polymerase Rpb1, domain 3 ACLO_RS11450 PF04560 RNA polymerase Rpb2, domain 7 ACLO_RS11450 PF04563 RNA polymerase beta subunit ACLO_RS11450 PF04561 RNA polymerase Rpb2, domain 2 ACLO_RS11450 PF04565 RNA polymerase Rpb2, domain 3 ACLO_RS11450 PF10385 RNA polymerase beta subunit external 1 domain ACLO_RS11450 PF00562 RNA polymerase Rpb2, domain 6 ACLO_RS11455 PF00542 Ribosomal protein L7/L12 C-terminal domain ACLO_RS11455 PF16320 Ribosomal protein L7/L12 dimerisation domain ACLO_RS11460 PF00466 Ribosomal protein L10 ACLO_RS11465 PF00687 Ribosomal protein L1p/L10e family ACLO_RS11470 PF03946 Ribosomal protein L11, N-terminal domain ACLO_RS11470 PF00298 Ribosomal protein L11, RNA binding domain ACLO_RS11475 PF02357 Transcription termination factor nusG ACLO_RS11490 PF00471 Ribosomal protein L33 ACLO_RS11495 PF03144 Elongation factor Tu domain 2 ACLO_RS11495 PF03143 Elongation factor Tu C-terminal domain ACLO_RS11495 PF00009 Elongation factor Tu GTP binding domain ACLO_RS11520 PF08245 Mur ligase middle domain ACLO_RS11525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ACLO_RS11525 PF00953 Glycosyl transferase family 4 ACLO_RS11530 PF01676 Metalloenzyme superfamily ACLO_RS11530 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ACLO_RS11535 PF00005 ABC transporter ACLO_RS11535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACLO_RS11540 PF00905 Penicillin binding protein transpeptidase domain ACLO_RS11540 PF00912 Transglycosylase ACLO_RS11540 PF17092 Penicillin-binding protein OB-like domain ACLO_RS11545 PF03951 Glutamine synthetase, beta-Grasp domain ACLO_RS11545 PF00120 Glutamine synthetase, catalytic domain ACLO_RS11555 PF07694 5TMR of 5TMR-LYT ACLO_RS11555 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS11560 PF02391 MoaE protein ACLO_RS11570 PF02621 Menaquinone biosynthesis ACLO_RS11580 PF03033 Glycosyltransferase family 28 N-terminal domain ACLO_RS11580 PF04101 Glycosyltransferase family 28 C-terminal domain ACLO_RS11585 PF01098 Cell cycle protein ACLO_RS11595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACLO_RS11635 PF00117 Glutamine amidotransferase class-I ACLO_RS11640 PF13416 Bacterial extracellular solute-binding protein ACLO_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS11650 PF00005 ABC transporter ACLO_RS11660 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS11660 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS11660 PF00563 EAL domain ACLO_RS11665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACLO_RS11665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACLO_RS11690 PF17674 HHH domain ACLO_RS11690 PF00575 S1 RNA binding domain ACLO_RS11690 PF09371 Tex-like protein N-terminal domain ACLO_RS11690 PF16921 Tex protein YqgF-like domain ACLO_RS11695 PF08448 PAS fold ACLO_RS11695 PF00563 EAL domain ACLO_RS11695 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS11700 PF01042 Endoribonuclease L-PSP ACLO_RS11715 PF00155 Aminotransferase class I and II ACLO_RS11720 PF09335 SNARE associated Golgi protein ACLO_RS11730 PF01245 Ribosomal protein L19 ACLO_RS11735 PF01746 tRNA (Guanine-1)-methyltransferase ACLO_RS11745 PF08267 Cobalamin-independent synthase, N-terminal domain ACLO_RS11745 PF01717 Cobalamin-independent synthase, Catalytic domain ACLO_RS11750 PF00291 Pyridoxal-phosphate dependent enzyme ACLO_RS11750 PF13291 ACT domain ACLO_RS11755 PF00119 ATP synthase A chain ACLO_RS11765 PF00580 UvrD/REP helicase N-terminal domain ACLO_RS11765 PF13361 UvrD-like helicase C-terminal domain ACLO_RS11770 PF00696 Amino acid kinase family ACLO_RS11775 PF00291 Pyridoxal-phosphate dependent enzyme ACLO_RS11785 PF00032 Cytochrome b(C-terminal)/b6/petD ACLO_RS11785 PF00033 Cytochrome b/b6/petB ACLO_RS11790 PF00034 Cytochrome c ACLO_RS11800 PF04452 RNA methyltransferase ACLO_RS11810 PF03454 MoeA C-terminal region (domain IV) ACLO_RS11810 PF03453 MoeA N-terminal region (domain I and II) ACLO_RS11810 PF00994 Probable molybdopterin binding domain ACLO_RS11815 PF06508 Queuosine biosynthesis protein QueC ACLO_RS11825 PF04055 Radical SAM superfamily ACLO_RS11835 PF00550 Phosphopantetheine attachment site ACLO_RS11840 PF02801 Beta-ketoacyl synthase, C-terminal domain ACLO_RS11840 PF00109 Beta-ketoacyl synthase, N-terminal domain ACLO_RS11845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACLO_RS11850 PF01230 HIT domain ACLO_RS11855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACLO_RS11855 PF01409 tRNA synthetases class II core domain (F) ACLO_RS11860 PF03147 Ferredoxin-fold anticodon binding domain ACLO_RS11860 PF03484 tRNA synthetase B5 domain ACLO_RS11860 PF01588 Putative tRNA binding domain ACLO_RS11860 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACLO_RS11865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACLO_RS11870 PF02401 LytB protein ACLO_RS11875 PF00575 S1 RNA binding domain ACLO_RS11880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACLO_RS11880 PF01842 ACT domain ACLO_RS11880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACLO_RS11885 PF08207 Elongation factor P (EF-P) KOW-like domain ACLO_RS11885 PF01132 Elongation factor P (EF-P) OB domain ACLO_RS11885 PF09285 Elongation factor P, C-terminal ACLO_RS11890 PF01872 RibD C-terminal domain ACLO_RS11890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACLO_RS11895 PF02576 RimP N-terminal domain ACLO_RS11900 PF02033 Ribosome-binding factor A ACLO_RS11905 PF04760 Translation initiation factor IF-2, N-terminal region ACLO_RS11905 PF11987 Translation-initiation factor 2 ACLO_RS11905 PF00009 Elongation factor Tu GTP binding domain ACLO_RS11915 PF08544 GHMP kinases C terminal ACLO_RS11915 PF00288 GHMP kinases N terminal domain ACLO_RS11925 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACLO_RS11940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACLO_RS11940 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACLO_RS11945 PF02445 Quinolinate synthetase A protein ACLO_RS11950 PF02660 Glycerol-3-phosphate acyltransferase ACLO_RS11960 PF05538 Campylobacter major outer membrane protein ACLO_RS11990 PF00472 RF-1 domain ACLO_RS11990 PF03462 PCRF domain ACLO_RS12015 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ACLO_RS12015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACLO_RS12030 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACLO_RS12035 PF01668 SmpB protein ACLO_RS12040 PF00288 GHMP kinases N terminal domain ACLO_RS12045 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACLO_RS12050 PF13361 UvrD-like helicase C-terminal domain ACLO_RS12050 PF00580 UvrD/REP helicase N-terminal domain ACLO_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACLO_RS12055 PF03466 LysR substrate binding domain ACLO_RS12060 PF04055 Radical SAM superfamily ACLO_RS12060 PF16199 Radical_SAM C-terminal domain ACLO_RS12065 PF00156 Phosphoribosyl transferase domain ACLO_RS12065 PF13537 Glutamine amidotransferase domain ACLO_RS12070 PF05173 Dihydrodipicolinate reductase, C-terminus ACLO_RS12070 PF01113 Dihydrodipicolinate reductase, N-terminus ACLO_RS12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS12080 PF00085 Thioredoxin ACLO_RS12085 PF02272 DHHA1 domain ACLO_RS12085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACLO_RS12085 PF01411 tRNA synthetases class II (A) ACLO_RS12110 PF00877 NlpC/P60 family ACLO_RS12115 PF00877 NlpC/P60 family ACLO_RS12130 PF02545 Maf-like protein ACLO_RS12135 PF00034 Cytochrome c ACLO_RS12135 PF03150 Di-haem cytochrome c peroxidase ACLO_RS12140 PF02779 Transketolase, pyrimidine binding domain ACLO_RS12140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACLO_RS12140 PF02780 Transketolase, C-terminal domain ACLO_RS12145 PF00155 Aminotransferase class I and II ACLO_RS12150 PF01842 ACT domain ACLO_RS12150 PF00800 Prephenate dehydratase ACLO_RS12150 PF01817 Chorismate mutase type II ACLO_RS12155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACLO_RS12155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACLO_RS12165 PF00121 Triosephosphate isomerase ACLO_RS12170 PF00162 Phosphoglycerate kinase ACLO_RS12175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACLO_RS12175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACLO_RS12180 PF01467 Cytidylyltransferase-like ACLO_RS12190 PF03485 Arginyl tRNA synthetase N terminal domain ACLO_RS12190 PF00750 tRNA synthetases class I (R) ACLO_RS12190 PF05746 DALR anticodon binding domain ACLO_RS12195 PF02416 mttA/Hcf106 family ACLO_RS12200 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACLO_RS12205 PF01553 Acyltransferase ACLO_RS12220 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ACLO_RS12225 PF01259 SAICAR synthetase ACLO_RS12230 PF03572 Peptidase family S41 ACLO_RS12230 PF13180 PDZ domain ACLO_RS12245 PF01142 tRNA pseudouridine synthase D (TruD) ACLO_RS12260 PF12704 MacB-like periplasmic core domain ACLO_RS12260 PF02687 FtsX-like permease family ACLO_RS12260 PF00005 ABC transporter ACLO_RS12290 PF00920 Dehydratase family ACLO_RS12295 PF17820 PDZ domain ACLO_RS12295 PF13180 PDZ domain ACLO_RS12300 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS12300 PF00072 Response regulator receiver domain ACLO_RS12315 PF03186 CobD/Cbib protein ACLO_RS12320 PF11066 Protein of unknown function (DUF2867) ACLO_RS12320 PF13460 NAD(P)H-binding ACLO_RS12335 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACLO_RS12335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACLO_RS12355 PF00155 Aminotransferase class I and II ACLO_RS12360 PF02654 Cobalamin-5-phosphate synthase ACLO_RS12370 PF01914 MarC family integral membrane protein ACLO_RS12375 PF02348 Cytidylyltransferase ACLO_RS12375 PF13472 GDSL-like Lipase/Acylhydrolase family ACLO_RS12395 PF11412 Disulphide bond corrector protein DsbC ACLO_RS12395 PF02683 Cytochrome C biogenesis protein transmembrane region ACLO_RS12400 PF00085 Thioredoxin ACLO_RS12405 PF00581 Rhodanese-like domain ACLO_RS12420 PF08443 RimK-like ATP-grasp domain ACLO_RS12420 PF18030 RimK PreATP-grasp domain ACLO_RS12435 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS12435 PF00563 EAL domain ACLO_RS12435 PF08495 FIST N domain ACLO_RS12435 PF10442 FIST C domain ACLO_RS12440 PF02666 Phosphatidylserine decarboxylase ACLO_RS12450 PF03562 MltA specific insert domain ACLO_RS12450 PF06725 3D domain ACLO_RS12460 PF00012 Hsp70 protein ACLO_RS12465 PF01025 GrpE ACLO_RS12470 PF01628 HrcA protein C terminal domain ACLO_RS12475 PF16868 NMT1-like family ACLO_RS12485 PF00196 Bacterial regulatory proteins, luxR family ACLO_RS12485 PF00072 Response regulator receiver domain ACLO_RS12490 PF08448 PAS fold ACLO_RS12490 PF08447 PAS fold ACLO_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS12495 PF01416 tRNA pseudouridine synthase ACLO_RS12505 PF01478 Type IV leader peptidase family ACLO_RS12505 PF06750 Bacterial Peptidase A24 N-terminal domain ACLO_RS12510 PF01255 Putative undecaprenyl diphosphate synthase ACLO_RS12515 PF04127 DNA / pantothenate metabolism flavoprotein ACLO_RS12515 PF02441 Flavoprotein ACLO_RS12520 PF14602 Hexapeptide repeat of succinyl-transferase ACLO_RS12520 PF12804 MobA-like NTP transferase domain ACLO_RS12530 PF00270 DEAD/DEAH box helicase ACLO_RS12530 PF08148 DSHCT (NUC185) domain ACLO_RS12530 PF00271 Helicase conserved C-terminal domain ACLO_RS12535 PF05958 tRNA (Uracil-5-)-methyltransferase ACLO_RS12545 PF00700 Bacterial flagellin C-terminal helical region ACLO_RS12545 PF00669 Bacterial flagellin N-terminal helical region ACLO_RS12545 PF07196 Flagellin hook IN motif ACLO_RS12565 PF02348 Cytidylyltransferase ACLO_RS12570 PF00483 Nucleotidyl transferase ACLO_RS12580 PF02350 UDP-N-acetylglucosamine 2-epimerase ACLO_RS12585 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS12600 PF01593 Flavin containing amine oxidoreductase ACLO_RS12605 PF03102 NeuB family ACLO_RS12605 PF08666 SAF domain ACLO_RS12615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACLO_RS12620 PF02719 Polysaccharide biosynthesis protein ACLO_RS12625 PF17191 RecG wedge domain ACLO_RS12625 PF13749 Putative ATP-dependent DNA helicase recG C-terminal ACLO_RS12625 PF00270 DEAD/DEAH box helicase ACLO_RS12635 PF00154 recA bacterial DNA recombination protein ACLO_RS12640 PF00113 Enolase, C-terminal TIM barrel domain ACLO_RS12640 PF03952 Enolase, N-terminal domain ACLO_RS12655 PF04055 Radical SAM superfamily ACLO_RS12655 PF06968 Biotin and Thiamin Synthesis associated domain ACLO_RS12665 PF13368 Topoisomerase C-terminal repeat ACLO_RS12665 PF01751 Toprim domain ACLO_RS12665 PF01131 DNA topoisomerase ACLO_RS12670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACLO_RS12675 PF02621 Menaquinone biosynthesis ACLO_RS12685 PF00361 Proton-conducting membrane transporter ACLO_RS12690 PF00361 Proton-conducting membrane transporter ACLO_RS12690 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACLO_RS12695 PF00361 Proton-conducting membrane transporter ACLO_RS12695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACLO_RS12700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACLO_RS12705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACLO_RS12710 PF12838 4Fe-4S dicluster domain ACLO_RS12715 PF00146 NADH dehydrogenase ACLO_RS12720 PF00384 Molybdopterin oxidoreductase ACLO_RS12720 PF01568 Molydopterin dinucleotide binding domain ACLO_RS12720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACLO_RS12720 PF12838 4Fe-4S dicluster domain ACLO_RS12720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACLO_RS12735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACLO_RS12740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACLO_RS12745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACLO_RS12750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACLO_RS12755 PF16450 Proteasomal ATPase OB C-terminal domain ACLO_RS12755 PF00004 ATPase family associated with various cellular activities (AAA) ACLO_RS12755 PF17758 Proteasomal ATPase OB N-terminal domain ACLO_RS12780 PF00916 Sulfate permease family ACLO_RS12780 PF01740 STAS domain ACLO_RS12785 PF01261 Xylose isomerase-like TIM barrel ACLO_RS12790 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACLO_RS12795 PF00209 Sodium:neurotransmitter symporter family ACLO_RS12805 PF02677 Epoxyqueuosine reductase QueH ACLO_RS12810 PF02684 Lipid-A-disaccharide synthetase ACLO_RS12815 PF07977 FabA-like domain ACLO_RS12820 PF00132 Bacterial transferase hexapeptide (six repeats) ACLO_RS12820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACLO_RS12825 PF06689 ClpX C4-type zinc finger ACLO_RS12825 PF07724 AAA domain (Cdc48 subfamily) ACLO_RS12825 PF10431 C-terminal, D2-small domain, of ClpB protein ACLO_RS12840 PF00677 Lumazine binding domain ACLO_RS12845 PF13932 GidA associated domain ACLO_RS12845 PF01134 Glucose inhibited division protein A ACLO_RS12860 PF13746 4Fe-4S dicluster domain ACLO_RS12860 PF12801 4Fe-4S binding domain ACLO_RS12860 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ACLO_RS12865 PF06418 CTP synthase N-terminus ACLO_RS12865 PF00117 Glutamine amidotransferase class-I ACLO_RS12870 PF01368 DHH family ACLO_RS12870 PF02272 DHHA1 domain ACLO_RS12870 PF17768 RecJ OB domain ACLO_RS12870 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ACLO_RS12900 PF02811 PHP domain ACLO_RS12900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACLO_RS12900 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACLO_RS12900 PF14579 Helix-hairpin-helix motif ACLO_RS12905 PF01975 Survival protein SurE ACLO_RS12915 PF01165 Ribosomal protein S21 ACLO_RS12920 PF01967 MoaC family ACLO_RS12955 PF01027 Inhibitor of apoptosis-promoting Bax1 ACLO_RS12960 PF17792 ThiD2 family ACLO_RS12960 PF02581 Thiamine monophosphate synthase ACLO_RS12970 PF03840 Preprotein translocase SecG subunit ACLO_RS12980 PF01765 Ribosome recycling factor ACLO_RS12985 PF00156 Phosphoribosyl transferase domain ACLO_RS12995 PF12832 MFS_1 like family ACLO_RS13000 PF12795 Mechanosensitive ion channel porin domain ACLO_RS13000 PF00924 Mechanosensitive ion channel ACLO_RS13000 PF12794 Mechanosensitive ion channel inner membrane domain 1 ACLO_RS13005 PF01544 CorA-like Mg2+ transporter protein ACLO_RS13010 PF03883 Peroxide stress protein YaaA ACLO_RS13015 PF02810 SEC-C motif ACLO_RS13040 PF03167 Uracil DNA glycosylase superfamily ACLO_RS13045 PF00171 Aldehyde dehydrogenase family ACLO_RS13050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACLO_RS13050 PF00205 Thiamine pyrophosphate enzyme, central domain ACLO_RS13050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACLO_RS13055 PF04011 LemA family ACLO_RS13070 PF13419 Haloacid dehalogenase-like hydrolase ACLO_RS13080 PF00210 Ferritin-like domain ACLO_RS13085 PF01047 MarR family ACLO_RS13090 PF07690 Major Facilitator Superfamily ACLO_RS13095 PF02203 Tar ligand binding domain homologue ACLO_RS13095 PF00672 HAMP domain ACLO_RS13095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13155 PF01053 Cys/Met metabolism PLP-dependent enzyme ACLO_RS13160 PF02082 Transcriptional regulator ACLO_RS13165 PF00291 Pyridoxal-phosphate dependent enzyme ACLO_RS13175 PF01507 Phosphoadenosine phosphosulfate reductase family ACLO_RS13180 PF01507 Phosphoadenosine phosphosulfate reductase family ACLO_RS13185 PF00009 Elongation factor Tu GTP binding domain ACLO_RS13190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACLO_RS13190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACLO_RS13195 PF00266 Aminotransferase class-V ACLO_RS13210 PF00149 Calcineurin-like phosphoesterase ACLO_RS13215 PF00011 Hsp20/alpha crystallin family ACLO_RS13225 PF14403 Circularly permuted ATP-grasp type 2 ACLO_RS13225 PF04168 A predicted alpha-helical domain with a conserved ER motif. ACLO_RS13230 PF08379 Bacterial transglutaminase-like N-terminal region ACLO_RS13230 PF01841 Transglutaminase-like superfamily ACLO_RS13235 PF12857 TOBE-like domain ACLO_RS13235 PF00005 ABC transporter ACLO_RS13235 PF17850 CysA C-terminal regulatory domain ACLO_RS13240 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS13245 PF00528 Binding-protein-dependent transport system inner membrane component ACLO_RS13255 PF02082 Transcriptional regulator ACLO_RS13275 PF14403 Circularly permuted ATP-grasp type 2 ACLO_RS13285 PF00884 Sulfatase ACLO_RS13285 PF08019 Phosphoethanolamine transferase EptA/EptB ACLO_RS13295 PF01219 Prokaryotic diacylglycerol kinase ACLO_RS13315 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS13315 PF00072 Response regulator receiver domain ACLO_RS13325 PF04143 Sulphur transport ACLO_RS13330 PF01206 Sulfurtransferase TusA ACLO_RS13335 PF02511 Thymidylate synthase complementing protein ACLO_RS13340 PF04960 Glutaminase ACLO_RS13345 PF03458 UPF0126 domain ACLO_RS13355 PF02911 Formyl transferase, C-terminal domain ACLO_RS13355 PF00551 Formyl transferase ACLO_RS13360 PF02075 Crossover junction endodeoxyribonuclease RuvC ACLO_RS13370 PF00772 DnaB-like helicase N terminal domain ACLO_RS13370 PF03796 DnaB-like helicase C terminal domain ACLO_RS13380 PF02195 ParB-like nuclease domain ACLO_RS13385 PF13614 AAA domain ACLO_RS13395 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS13395 PF00593 TonB dependent receptor ACLO_RS13415 PF00005 ABC transporter ACLO_RS13430 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS13430 PF00593 TonB dependent receptor ACLO_RS13445 PF00072 Response regulator receiver domain ACLO_RS13445 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS13455 PF13657 HipA N-terminal domain ACLO_RS13455 PF07804 HipA-like C-terminal domain ACLO_RS13505 PF08447 PAS fold ACLO_RS13505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13510 PF00672 HAMP domain ACLO_RS13510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13510 PF02203 Tar ligand binding domain homologue ACLO_RS13515 PF02203 Tar ligand binding domain homologue ACLO_RS13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13515 PF00672 HAMP domain ACLO_RS13535 PF08447 PAS fold ACLO_RS13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13540 PF00672 HAMP domain ACLO_RS13540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13540 PF02203 Tar ligand binding domain homologue ACLO_RS13550 PF09078 CheY binding ACLO_RS13550 PF02895 Signal transducing histidine kinase, homodimeric domain ACLO_RS13550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS13550 PF01627 Hpt domain ACLO_RS13550 PF01584 CheW-like domain ACLO_RS13560 PF00563 EAL domain ACLO_RS13560 PF01590 GAF domain ACLO_RS13560 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS13560 PF00360 Phytochrome region ACLO_RS13570 PF00872 Transposase, Mutator family ACLO_RS13580 PF00872 Transposase, Mutator family ACLO_RS13590 PF01695 IstB-like ATP binding protein ACLO_RS13600 PF01867 CRISPR associated protein Cas1 ACLO_RS13615 PF13173 AAA domain ACLO_RS13615 PF13635 Domain of unknown function (DUF4143) ACLO_RS13685 PF18211 Csm1 subunit domain B ACLO_RS13685 PF01966 HD domain ACLO_RS13695 PF03787 RAMP superfamily ACLO_RS13730 PF07804 HipA-like C-terminal domain ACLO_RS13730 PF13657 HipA N-terminal domain ACLO_RS13740 PF01867 CRISPR associated protein Cas1 ACLO_RS13745 PF09827 CRISPR associated protein Cas2 ACLO_RS13785 PF02203 Tar ligand binding domain homologue ACLO_RS13785 PF00672 HAMP domain ACLO_RS13785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS13795 PF00440 Bacterial regulatory proteins, tetR family ACLO_RS13795 PF08360 QacR-like protein, C-terminal region ACLO_RS13815 PF02899 Phage integrase, N-terminal SAM-like domain ACLO_RS13815 PF00589 Phage integrase family ACLO_RS13835 PF00196 Bacterial regulatory proteins, luxR family ACLO_RS13840 PF00529 HlyD membrane-fusion protein of T1SS ACLO_RS13840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACLO_RS13845 PF03412 Peptidase C39 family ACLO_RS13845 PF00005 ABC transporter ACLO_RS13845 PF00664 ABC transporter transmembrane region ACLO_RS13850 PF00691 OmpA family ACLO_RS13850 PF05736 OprF membrane domain ACLO_RS13855 PF00486 Transcriptional regulatory protein, C terminal ACLO_RS13855 PF00072 Response regulator receiver domain ACLO_RS13860 PF08448 PAS fold ACLO_RS13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS13860 PF08447 PAS fold ACLO_RS13875 PF00593 TonB dependent receptor ACLO_RS13885 PF08448 PAS fold ACLO_RS13885 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS13885 PF00563 EAL domain ACLO_RS13920 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS13920 PF00593 TonB dependent receptor ACLO_RS13925 PF17853 GGDEF-like domain ACLO_RS13925 PF12833 Helix-turn-helix domain ACLO_RS13945 PF00593 TonB dependent receptor ACLO_RS13945 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS13955 PF00873 AcrB/AcrD/AcrF family ACLO_RS13970 PF00072 Response regulator receiver domain ACLO_RS13970 PF12833 Helix-turn-helix domain ACLO_RS13975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS13975 PF00512 His Kinase A (phospho-acceptor) domain ACLO_RS13975 PF00989 PAS fold ACLO_RS13990 PF10415 Fumarase C C-terminus ACLO_RS13990 PF00206 Lyase ACLO_RS14010 PF07715 TonB-dependent Receptor Plug Domain ACLO_RS14010 PF00593 TonB dependent receptor ACLO_RS14020 PF12282 Signal transduction histidine kinase ACLO_RS14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS14020 PF07568 Histidine kinase ACLO_RS14030 PF02203 Tar ligand binding domain homologue ACLO_RS14030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACLO_RS14030 PF00672 HAMP domain ACLO_RS14035 PF03707 Bacterial signalling protein N terminal repeat ACLO_RS14035 PF00990 Diguanylate cyclase, GGDEF domain ACLO_RS14035 PF00563 EAL domain ACLO_RS14040 PF01842 ACT domain ACLO_RS14040 PF00800 Prephenate dehydratase ACLO_RS14040 PF01817 Chorismate mutase type II ACLO_RS14055 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACLO_RS14055 PF02558 Ketopantoate reductase PanE/ApbA ACLO_RS14060 PF00561 alpha/beta hydrolase fold ACLO_RS14065 PF00296 Luciferase-like monooxygenase ACLO_RS14070 PF01361 Tautomerase enzyme ACLO_RS14085 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ACLO_RS14085 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACLO_RS14095 PF00171 Aldehyde dehydrogenase family ACLO_RS14100 PF03928 Haem-degrading ACLO_RS14105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACLO_RS14110 PF00111 2Fe-2S iron-sulfur cluster binding domain ACLO_RS14110 PF00175 Oxidoreductase NAD-binding domain ACLO_RS14110 PF00970 Oxidoreductase FAD-binding domain ACLO_RS14130 PF01925 Sulfite exporter TauE/SafE ACLO_RS14135 PF00111 2Fe-2S iron-sulfur cluster binding domain ACLO_RS14135 PF00175 Oxidoreductase NAD-binding domain ACLO_RS14135 PF00970 Oxidoreductase FAD-binding domain ACLO_RS14145 PF04945 YHS domain ACLO_RS14145 PF02332 Methane/Phenol/Toluene Hydroxylase ACLO_RS14150 PF02406 MmoB/DmpM family ACLO_RS14155 PF02332 Methane/Phenol/Toluene Hydroxylase ACLO_RS14165 PF12282 Signal transduction histidine kinase ACLO_RS14165 PF07568 Histidine kinase ACLO_RS14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACLO_RS14170 PF00072 Response regulator receiver domain ACLO_RS14170 PF02954 Bacterial regulatory protein, Fis family ACLO_RS14170 PF00158 Sigma-54 interaction domain ACLO_RS14175 PF00106 short chain dehydrogenase ACLO_RS14180 PF00180 Isocitrate/isopropylmalate dehydrogenase