locus-tag class description ADFLV_RS00005 PF00308 Bacterial dnaA protein ADFLV_RS00005 PF11638 DnaA N-terminal domain ADFLV_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ADFLV_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ADFLV_RS00010 PF02767 DNA polymerase III beta subunit, central domain ADFLV_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ADFLV_RS00015 PF01751 Toprim domain ADFLV_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ADFLV_RS00015 PF00204 DNA gyrase B ADFLV_RS00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS00025 PF14489 QueF-like protein ADFLV_RS00085 PF13356 Arm DNA-binding domain ADFLV_RS00085 PF00589 Phage integrase family ADFLV_RS00090 PF09335 SNARE associated Golgi protein ADFLV_RS00095 PF12838 4Fe-4S dicluster domain ADFLV_RS00100 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS00100 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS00100 PF06689 ClpX C4-type zinc finger ADFLV_RS00115 PF02954 Bacterial regulatory protein, Fis family ADFLV_RS00115 PF01590 GAF domain ADFLV_RS00115 PF00158 Sigma-54 interaction domain ADFLV_RS00125 PF02910 Fumarate reductase flavoprotein C-term ADFLV_RS00125 PF00890 FAD binding domain ADFLV_RS00130 PF00248 Aldo/keto reductase family ADFLV_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS00135 PF03459 TOBE domain ADFLV_RS00140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ADFLV_RS00140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ADFLV_RS00145 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS00160 PF13649 Methyltransferase domain ADFLV_RS00165 PF00005 ABC transporter ADFLV_RS00180 PF00296 Luciferase-like monooxygenase ADFLV_RS00185 PF08402 TOBE domain ADFLV_RS00185 PF00005 ABC transporter ADFLV_RS00190 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS00205 PF03459 TOBE domain ADFLV_RS00210 PF00148 Nitrogenase component 1 type Oxidoreductase ADFLV_RS00210 PF11844 Domain of unknown function (DUF3364) ADFLV_RS00215 PF00148 Nitrogenase component 1 type Oxidoreductase ADFLV_RS00225 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ADFLV_RS00230 PF03976 Polyphosphate kinase 2 (PPK2) ADFLV_RS00240 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS00245 PF00309 Sigma-54 factor, Activator interacting domain (AID) ADFLV_RS00245 PF04963 Sigma-54 factor, core binding domain ADFLV_RS00245 PF04552 Sigma-54, DNA binding domain ADFLV_RS00250 PF00111 2Fe-2S iron-sulfur cluster binding domain ADFLV_RS00265 PF03206 Nitrogen fixation protein NifW ADFLV_RS00270 PF00258 Flavodoxin ADFLV_RS00275 PF03270 Protein of unknown function, DUF269 ADFLV_RS00280 PF02579 Dinitrogenase iron-molybdenum cofactor ADFLV_RS00305 PF00148 Nitrogenase component 1 type Oxidoreductase ADFLV_RS00325 PF00148 Nitrogenase component 1 type Oxidoreductase ADFLV_RS00330 PF02525 Flavodoxin-like fold ADFLV_RS00335 PF01638 HxlR-like helix-turn-helix ADFLV_RS00350 PF02579 Dinitrogenase iron-molybdenum cofactor ADFLV_RS00355 PF00753 Metallo-beta-lactamase superfamily ADFLV_RS00355 PF00258 Flavodoxin ADFLV_RS00360 PF03466 LysR substrate binding domain ADFLV_RS00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS00370 PF01810 LysE type translocator ADFLV_RS00380 PF02579 Dinitrogenase iron-molybdenum cofactor ADFLV_RS00380 PF04055 Radical SAM superfamily ADFLV_RS00390 PF00682 HMGL-like ADFLV_RS00420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS00420 PF00672 HAMP domain ADFLV_RS00420 PF02203 Tar ligand binding domain homologue ADFLV_RS00425 PF08447 PAS fold ADFLV_RS00425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS00430 PF00849 RNA pseudouridylate synthase ADFLV_RS00435 PF10397 Adenylosuccinate lyase C-terminus ADFLV_RS00435 PF00206 Lyase ADFLV_RS00440 PF02867 Ribonucleotide reductase, barrel domain ADFLV_RS00440 PF03477 ATP cone domain ADFLV_RS00440 PF00317 Ribonucleotide reductase, all-alpha domain ADFLV_RS00445 PF00268 Ribonucleotide reductase, small chain ADFLV_RS00460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ADFLV_RS00475 PF01928 CYTH domain ADFLV_RS00480 PF03063 Prismane/CO dehydrogenase family ADFLV_RS00495 PF00691 OmpA family ADFLV_RS00500 PF00318 Ribosomal protein S2 ADFLV_RS00505 PF00107 Zinc-binding dehydrogenase ADFLV_RS00505 PF08240 Alcohol dehydrogenase GroES-like domain ADFLV_RS00510 PF01638 HxlR-like helix-turn-helix ADFLV_RS00515 PF03649 Uncharacterised protein family (UPF0014) ADFLV_RS00525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ADFLV_RS00525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ADFLV_RS00530 PF02934 GatB/GatE catalytic domain ADFLV_RS00530 PF02637 GatB domain ADFLV_RS00545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ADFLV_RS00555 PF03480 Bacterial extracellular solute-binding protein, family 7 ADFLV_RS00560 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS00565 PF00072 Response regulator receiver domain ADFLV_RS00565 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS00570 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS00570 PF00072 Response regulator receiver domain ADFLV_RS00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS00575 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS00575 PF00989 PAS fold ADFLV_RS00580 PF02589 LUD domain ADFLV_RS00585 PF13183 4Fe-4S dicluster domain ADFLV_RS00585 PF02589 LUD domain ADFLV_RS00585 PF11870 Domain of unknown function (DUF3390) ADFLV_RS00590 PF02754 Cysteine-rich domain ADFLV_RS00600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ADFLV_RS00605 PF00364 Biotin-requiring enzyme ADFLV_RS00610 PF02785 Biotin carboxylase C-terminal domain ADFLV_RS00610 PF00289 Biotin carboxylase, N-terminal domain ADFLV_RS00610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ADFLV_RS00615 PF00270 DEAD/DEAH box helicase ADFLV_RS00615 PF00271 Helicase conserved C-terminal domain ADFLV_RS00620 PF01384 Phosphate transporter family ADFLV_RS00630 PF13537 Glutamine amidotransferase domain ADFLV_RS00630 PF00733 Asparagine synthase ADFLV_RS00640 PF00881 Nitroreductase family ADFLV_RS00645 PF03480 Bacterial extracellular solute-binding protein, family 7 ADFLV_RS00650 PF13183 4Fe-4S dicluster domain ADFLV_RS00650 PF13085 2Fe-2S iron-sulfur cluster binding domain ADFLV_RS00655 PF02910 Fumarate reductase flavoprotein C-term ADFLV_RS00655 PF00890 FAD binding domain ADFLV_RS00665 PF13638 PIN domain ADFLV_RS00665 PF02562 PhoH-like protein ADFLV_RS00675 PF05496 Holliday junction DNA helicase RuvB P-loop domain ADFLV_RS00675 PF16193 AAA C-terminal domain ADFLV_RS00675 PF01661 Macro domain ADFLV_RS00675 PF12002 MgsA AAA+ ATPase C terminal ADFLV_RS00680 PF01479 S4 domain ADFLV_RS00680 PF00849 RNA pseudouridylate synthase ADFLV_RS00685 PF01380 SIS domain ADFLV_RS00685 PF00571 CBS domain ADFLV_RS00690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ADFLV_RS00690 PF17770 Ribonuclease J C-terminal domain ADFLV_RS00690 PF00753 Metallo-beta-lactamase superfamily ADFLV_RS00695 PF00398 Ribosomal RNA adenine dimethylase ADFLV_RS00700 PF00977 Histidine biosynthesis protein ADFLV_RS00715 PF04055 Radical SAM superfamily ADFLV_RS00720 PF00749 tRNA synthetases class I (E and Q), catalytic domain ADFLV_RS00725 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ADFLV_RS00730 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS00730 PF00072 Response regulator receiver domain ADFLV_RS00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS00755 PF00873 AcrB/AcrD/AcrF family ADFLV_RS00760 PF04264 YceI-like domain ADFLV_RS00770 PF01554 MatE ADFLV_RS00775 PF13411 MerR HTH family regulatory protein ADFLV_RS00780 PF00857 Isochorismatase family ADFLV_RS00785 PF03447 Homoserine dehydrogenase, NAD binding domain ADFLV_RS00785 PF00742 Homoserine dehydrogenase ADFLV_RS00785 PF01842 ACT domain ADFLV_RS00790 PF00155 Aminotransferase class I and II ADFLV_RS00800 PF08032 RNA 2'-O ribose methyltransferase substrate binding ADFLV_RS00800 PF00588 SpoU rRNA Methylase family ADFLV_RS00805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ADFLV_RS00810 PF01197 Ribosomal protein L31 ADFLV_RS00875 PF00437 Type II/IV secretion system protein ADFLV_RS00905 PF02222 ATP-grasp domain ADFLV_RS00915 PF01678 Diaminopimelate epimerase ADFLV_RS00920 PF01121 Dephospho-CoA kinase ADFLV_RS00925 PF17284 Spermidine synthase tetramerisation domain ADFLV_RS00930 PF02769 AIR synthase related protein, C-terminal domain ADFLV_RS00930 PF00586 AIR synthase related protein, N-terminal domain ADFLV_RS00935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ADFLV_RS00935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ADFLV_RS00940 PF02678 Pirin ADFLV_RS00940 PF17954 Quercetinase C-terminal cupin domain ADFLV_RS00955 PF04264 YceI-like domain ADFLV_RS00960 PF01047 MarR family ADFLV_RS00965 PF00266 Aminotransferase class-V ADFLV_RS00970 PF13393 Histidyl-tRNA synthetase ADFLV_RS00975 PF00709 Adenylosuccinate synthetase ADFLV_RS00985 PF00117 Glutamine amidotransferase class-I ADFLV_RS00985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ADFLV_RS00990 PF04608 Phosphatidylglycerophosphatase A ADFLV_RS01000 PF02542 YgbB family ADFLV_RS01000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ADFLV_RS01015 PF01964 Radical SAM ThiC family ADFLV_RS01020 PF10609 NUBPL iron-transfer P-loop NTPase ADFLV_RS01020 PF01883 Iron-sulfur cluster assembly protein ADFLV_RS01030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ADFLV_RS01030 PF01502 Phosphoribosyl-AMP cyclohydrolase ADFLV_RS01040 PF01063 Amino-transferase class IV ADFLV_RS01050 PF00925 GTP cyclohydrolase II ADFLV_RS01060 PF02965 Vitamin B12 dependent methionine synthase, activation domain ADFLV_RS01060 PF00809 Pterin binding enzyme ADFLV_RS01060 PF02310 B12 binding domain ADFLV_RS01060 PF02607 B12 binding domain ADFLV_RS01060 PF02574 Homocysteine S-methyltransferase ADFLV_RS01065 PF00892 EamA-like transporter family ADFLV_RS01075 PF00465 Iron-containing alcohol dehydrogenase ADFLV_RS01080 PF09997 Predicted membrane protein (DUF2238) ADFLV_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS01085 PF08447 PAS fold ADFLV_RS01085 PF08448 PAS fold ADFLV_RS01095 PF07943 Penicillin-binding protein 5, C-terminal domain ADFLV_RS01095 PF00768 D-alanyl-D-alanine carboxypeptidase ADFLV_RS01110 PF02664 S-Ribosylhomocysteinase (LuxS) ADFLV_RS01150 PF02405 Permease MlaE ADFLV_RS01155 PF09383 NIL domain ADFLV_RS01155 PF00005 ABC transporter ADFLV_RS01175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ADFLV_RS01180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ADFLV_RS01180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ADFLV_RS01190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ADFLV_RS01195 PF13419 Haloacid dehalogenase-like hydrolase ADFLV_RS01200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ADFLV_RS01205 PF00380 Ribosomal protein S9/S16 ADFLV_RS01210 PF00572 Ribosomal protein L13 ADFLV_RS01215 PF00989 PAS fold ADFLV_RS01215 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS01215 PF16736 Single Cache-like ADFLV_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS01220 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS01220 PF00072 Response regulator receiver domain ADFLV_RS01230 PF01895 PhoU domain ADFLV_RS01235 PF00005 ABC transporter ADFLV_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS01245 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS01250 PF01590 GAF domain ADFLV_RS01250 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS01250 PF00989 PAS fold ADFLV_RS01250 PF00563 EAL domain ADFLV_RS01255 PF12849 PBP superfamily domain ADFLV_RS01265 PF03462 PCRF domain ADFLV_RS01265 PF00472 RF-1 domain ADFLV_RS01270 PF01649 Ribosomal protein S20 ADFLV_RS01275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ADFLV_RS01275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ADFLV_RS01275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ADFLV_RS01275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ADFLV_RS01280 PF01252 Signal peptidase (SPase) II ADFLV_RS01285 PF00330 Aconitase family (aconitate hydratase) ADFLV_RS01290 PF12804 MobA-like NTP transferase domain ADFLV_RS01300 PF00453 Ribosomal protein L20 ADFLV_RS01305 PF01632 Ribosomal protein L35 ADFLV_RS01310 PF00707 Translation initiation factor IF-3, C-terminal domain ADFLV_RS01310 PF05198 Translation initiation factor IF-3, N-terminal domain ADFLV_RS01315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ADFLV_RS01315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ADFLV_RS01315 PF03129 Anticodon binding domain ADFLV_RS01350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ADFLV_RS01350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ADFLV_RS01350 PF13288 DXP reductoisomerase C-terminal domain ADFLV_RS01370 PF00814 Glycoprotease family ADFLV_RS01375 PF01253 Translation initiation factor SUI1 ADFLV_RS01380 PF01256 Carbohydrate kinase ADFLV_RS01380 PF03853 YjeF-related protein N-terminus ADFLV_RS01385 PF03091 CutA1 divalent ion tolerance protein ADFLV_RS01390 PF05690 Thiazole biosynthesis protein ThiG ADFLV_RS01415 PF00589 Phage integrase family ADFLV_RS01415 PF14659 Phage integrase, N-terminal SAM-like domain ADFLV_RS01505 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ADFLV_RS01525 PF01699 Sodium/calcium exchanger protein ADFLV_RS01540 PF00271 Helicase conserved C-terminal domain ADFLV_RS01540 PF08463 EcoEI R protein C-terminal ADFLV_RS01540 PF04851 Type III restriction enzyme, res subunit ADFLV_RS01540 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ADFLV_RS01550 PF08448 PAS fold ADFLV_RS01550 PF08447 PAS fold ADFLV_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS01555 PF00072 Response regulator receiver domain ADFLV_RS01555 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS01565 PF03412 Peptidase C39 family ADFLV_RS01565 PF00664 ABC transporter transmembrane region ADFLV_RS01565 PF00005 ABC transporter ADFLV_RS01570 PF13533 Biotin-lipoyl like ADFLV_RS01580 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS01580 PF00989 PAS fold ADFLV_RS01585 PF02779 Transketolase, pyrimidine binding domain ADFLV_RS01585 PF02780 Transketolase, C-terminal domain ADFLV_RS01585 PF00456 Transketolase, thiamine diphosphate binding domain ADFLV_RS01595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ADFLV_RS01595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ADFLV_RS01610 PF04172 LrgB-like family ADFLV_RS01615 PF01022 Bacterial regulatory protein, arsR family ADFLV_RS01625 PF02040 Arsenical pump membrane protein ADFLV_RS01630 PF01451 Low molecular weight phosphotyrosine protein phosphatase ADFLV_RS01645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ADFLV_RS01650 PF00916 Sulfate permease family ADFLV_RS01650 PF01740 STAS domain ADFLV_RS01680 PF01553 Acyltransferase ADFLV_RS01680 PF00501 AMP-binding enzyme ADFLV_RS01690 PF08335 GlnD PII-uridylyltransferase ADFLV_RS01690 PF01966 HD domain ADFLV_RS01700 PF02743 Cache domain ADFLV_RS01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS01700 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS01715 PF12796 Ankyrin repeats (3 copies) ADFLV_RS01720 PF00909 Ammonium Transporter Family ADFLV_RS01725 PF00543 Nitrogen regulatory protein P-II ADFLV_RS01730 PF00909 Ammonium Transporter Family ADFLV_RS01735 PF00543 Nitrogen regulatory protein P-II ADFLV_RS01745 PF02154 Flagellar motor switch protein FliM ADFLV_RS01745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ADFLV_RS01750 PF02119 Flagellar P-ring protein ADFLV_RS01760 PF01313 Bacterial export proteins, family 3 ADFLV_RS01785 PF02107 Flagellar L-ring protein ADFLV_RS01795 PF02465 Flagellar hook-associated protein 2 N-terminus ADFLV_RS01795 PF07196 Flagellin hook IN motif ADFLV_RS01795 PF07195 Flagellar hook-associated protein 2 C-terminus ADFLV_RS01800 PF02561 Flagellar protein FliS ADFLV_RS01810 PF01171 PP-loop family ADFLV_RS01815 PF00919 Uncharacterized protein family UPF0004 ADFLV_RS01815 PF04055 Radical SAM superfamily ADFLV_RS01815 PF18693 TRAM domain ADFLV_RS01820 PF02569 Pantoate-beta-alanine ligase ADFLV_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS01835 PF01648 4'-phosphopantetheinyl transferase superfamily ADFLV_RS01840 PF03652 Holliday junction resolvase ADFLV_RS01855 PF00923 Transaldolase/Fructose-6-phosphate aldolase ADFLV_RS01860 PF01474 Class-II DAHP synthetase family ADFLV_RS01865 PF03502 Nucleoside-specific channel-forming protein, Tsx ADFLV_RS01875 PF03960 ArsC family ADFLV_RS01880 PF02686 Glu-tRNAGln amidotransferase C subunit ADFLV_RS01885 PF01702 Queuine tRNA-ribosyltransferase ADFLV_RS01895 PF00155 Aminotransferase class I and II ADFLV_RS01905 PF01225 Mur ligase family, catalytic domain ADFLV_RS01905 PF02875 Mur ligase family, glutamate ligase domain ADFLV_RS01905 PF08245 Mur ligase middle domain ADFLV_RS01910 PF06965 Na+/H+ antiporter 1 ADFLV_RS01920 PF04748 Divergent polysaccharide deacetylase ADFLV_RS01925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ADFLV_RS01925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ADFLV_RS01930 PF00773 RNB domain ADFLV_RS01945 PF01250 Ribosomal protein S6 ADFLV_RS01950 PF00436 Single-strand binding protein family ADFLV_RS01955 PF01084 Ribosomal protein S18 ADFLV_RS01960 PF01406 tRNA synthetases class I (C) catalytic domain ADFLV_RS01960 PF09190 DALR domain ADFLV_RS01965 PF08529 NusA N-terminal domain ADFLV_RS01965 PF13184 NusA-like KH domain ADFLV_RS01975 PF00919 Uncharacterized protein family UPF0004 ADFLV_RS01975 PF01938 TRAM domain ADFLV_RS01975 PF04055 Radical SAM superfamily ADFLV_RS01980 PF04028 Domain of unknown function (DUF374) ADFLV_RS01990 PF04055 Radical SAM superfamily ADFLV_RS02000 PF00484 Carbonic anhydrase ADFLV_RS02005 PF00155 Aminotransferase class I and II ADFLV_RS02010 PF02021 Uncharacterised protein family UPF0102 ADFLV_RS02025 PF05736 OprF membrane domain ADFLV_RS02025 PF00691 OmpA family ADFLV_RS02030 PF02887 Pyruvate kinase, alpha/beta domain ADFLV_RS02030 PF00224 Pyruvate kinase, barrel domain ADFLV_RS02030 PF00391 PEP-utilising enzyme, mobile domain ADFLV_RS02040 PF00202 Aminotransferase class-III ADFLV_RS02050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ADFLV_RS02050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ADFLV_RS02055 PF00425 chorismate binding enzyme ADFLV_RS02075 PF03591 AzlC protein ADFLV_RS02080 PF05437 Branched-chain amino acid transport protein (AzlD) ADFLV_RS02085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ADFLV_RS02085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ADFLV_RS02090 PF02504 Fatty acid synthesis protein ADFLV_RS02095 PF01783 Ribosomal L32p protein family ADFLV_RS02105 PF00334 Nucleoside diphosphate kinase ADFLV_RS02110 PF00037 4Fe-4S binding domain ADFLV_RS02115 PF00578 AhpC/TSA family ADFLV_RS02115 PF10417 C-terminal domain of 1-Cys peroxiredoxin ADFLV_RS02120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ADFLV_RS02120 PF07498 Rho termination factor, N-terminal domain ADFLV_RS02120 PF07497 Rho termination factor, RNA-binding domain ADFLV_RS02130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ADFLV_RS02130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ADFLV_RS02135 PF01177 Asp/Glu/Hydantoin racemase ADFLV_RS02140 PF12169 DNA polymerase III subunits gamma and tau domain III ADFLV_RS02140 PF12170 DNA polymerase III tau subunit V interacting with alpha ADFLV_RS02140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ADFLV_RS02150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ADFLV_RS02150 PF03900 Porphobilinogen deaminase, C-terminal domain ADFLV_RS02160 PF00072 Response regulator receiver domain ADFLV_RS02160 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS02165 PF04303 PrpF protein ADFLV_RS02170 PF00694 Aconitase C-terminal domain ADFLV_RS02170 PF00330 Aconitase family (aconitate hydratase) ADFLV_RS02175 PF00285 Citrate synthase, C-terminal domain ADFLV_RS02190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ADFLV_RS02190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADFLV_RS02225 PF12833 Helix-turn-helix domain ADFLV_RS02225 PF06445 GyrI-like small molecule binding domain ADFLV_RS02230 PF00270 DEAD/DEAH box helicase ADFLV_RS02230 PF00271 Helicase conserved C-terminal domain ADFLV_RS02230 PF00570 HRDC domain ADFLV_RS02230 PF09382 RQC domain ADFLV_RS02230 PF16124 RecQ zinc-binding ADFLV_RS02240 PF01022 Bacterial regulatory protein, arsR family ADFLV_RS02245 PF00403 Heavy-metal-associated domain ADFLV_RS02260 PF01863 Protein of unknown function DUF45 ADFLV_RS02265 PF00350 Dynamin family ADFLV_RS02270 PF00350 Dynamin family ADFLV_RS02275 PF13085 2Fe-2S iron-sulfur cluster binding domain ADFLV_RS02275 PF13183 4Fe-4S dicluster domain ADFLV_RS02280 PF02910 Fumarate reductase flavoprotein C-term ADFLV_RS02280 PF00890 FAD binding domain ADFLV_RS02285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ADFLV_RS02290 PF00361 Proton-conducting membrane transporter ADFLV_RS02295 PF00361 Proton-conducting membrane transporter ADFLV_RS02295 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ADFLV_RS02300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ADFLV_RS02300 PF00361 Proton-conducting membrane transporter ADFLV_RS02305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ADFLV_RS02310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ADFLV_RS02315 PF12838 4Fe-4S dicluster domain ADFLV_RS02320 PF00146 NADH dehydrogenase ADFLV_RS02325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ADFLV_RS02325 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ADFLV_RS02325 PF00384 Molybdopterin oxidoreductase ADFLV_RS02330 PF00285 Citrate synthase, C-terminal domain ADFLV_RS02335 PF10531 SLBB domain ADFLV_RS02335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ADFLV_RS02335 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ADFLV_RS02345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ADFLV_RS02345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ADFLV_RS02350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ADFLV_RS02355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ADFLV_RS02360 PF00155 Aminotransferase class I and II ADFLV_RS02365 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ADFLV_RS02370 PF06738 Putative threonine/serine exporter ADFLV_RS02370 PF12821 Threonine/Serine exporter, ThrE ADFLV_RS02375 PF06738 Putative threonine/serine exporter ADFLV_RS02385 PF01555 DNA methylase ADFLV_RS02400 PF03309 Type III pantothenate kinase ADFLV_RS02405 PF01634 ATP phosphoribosyltransferase ADFLV_RS02415 PF08448 PAS fold ADFLV_RS02415 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS02420 PF00579 tRNA synthetases class I (W and Y) ADFLV_RS02425 PF16916 Dimerisation domain of Zinc Transporter ADFLV_RS02425 PF01545 Cation efflux family ADFLV_RS02440 PF02403 Seryl-tRNA synthetase N-terminal domain ADFLV_RS02440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ADFLV_RS02445 PF16655 PhoD-like phosphatase, N-terminal domain ADFLV_RS02445 PF09423 PhoD-like phosphatase ADFLV_RS02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS02460 PF08447 PAS fold ADFLV_RS02480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ADFLV_RS02485 PF12801 4Fe-4S binding domain ADFLV_RS02485 PF00037 4Fe-4S binding domain ADFLV_RS02490 PF12800 4Fe-4S binding domain ADFLV_RS02490 PF12838 4Fe-4S dicluster domain ADFLV_RS02495 PF01568 Molydopterin dinucleotide binding domain ADFLV_RS02495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ADFLV_RS02495 PF00384 Molybdopterin oxidoreductase ADFLV_RS02495 PF10518 TAT (twin-arginine translocation) pathway signal sequence ADFLV_RS02500 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS02500 PF10442 FIST C domain ADFLV_RS02500 PF08495 FIST N domain ADFLV_RS02500 PF00563 EAL domain ADFLV_RS02505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ADFLV_RS02520 PF02885 Glycosyl transferase family, helical bundle domain ADFLV_RS02520 PF00591 Glycosyl transferase family, a/b domain ADFLV_RS02525 PF04055 Radical SAM superfamily ADFLV_RS02525 PF06463 Molybdenum Cofactor Synthesis C ADFLV_RS02530 PF00312 Ribosomal protein S15 ADFLV_RS02545 PF13380 CoA binding domain ADFLV_RS02550 PF08521 Two-component sensor kinase N-terminal ADFLV_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02550 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS02555 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS02555 PF00072 Response regulator receiver domain ADFLV_RS02560 PF00639 PPIC-type PPIASE domain ADFLV_RS02565 PF01116 Fructose-bisphosphate aldolase class-II ADFLV_RS02570 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS02570 PF00072 Response regulator receiver domain ADFLV_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02580 PF00171 Aldehyde dehydrogenase family ADFLV_RS02590 PF02472 Biopolymer transport protein ExbD/TolR ADFLV_RS02595 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS02605 PF00989 PAS fold ADFLV_RS02605 PF08447 PAS fold ADFLV_RS02605 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02610 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS02610 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS02610 PF00563 EAL domain ADFLV_RS02615 PF01202 Shikimate kinase ADFLV_RS02620 PF00815 Histidinol dehydrogenase ADFLV_RS02630 PF00348 Polyprenyl synthetase ADFLV_RS02635 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ADFLV_RS02635 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ADFLV_RS02635 PF01488 Shikimate / quinate 5-dehydrogenase ADFLV_RS02640 PF04073 Aminoacyl-tRNA editing domain ADFLV_RS02640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ADFLV_RS02640 PF03129 Anticodon binding domain ADFLV_RS02645 PF05552 Conserved TM helix ADFLV_RS02645 PF00924 Mechanosensitive ion channel ADFLV_RS02650 PF01743 Poly A polymerase head domain ADFLV_RS02650 PF12627 Probable RNA and SrmB- binding site of polymerase A ADFLV_RS02650 PF01966 HD domain ADFLV_RS02670 PF02699 Preprotein translocase subunit ADFLV_RS02675 PF02355 Protein export membrane protein ADFLV_RS02680 PF07549 SecD/SecF GG Motif ADFLV_RS02680 PF02355 Protein export membrane protein ADFLV_RS02695 PF09334 tRNA synthetases class I (M) ADFLV_RS02695 PF13603 Leucyl-tRNA synthetase, Domain 2 ADFLV_RS02695 PF00133 tRNA synthetases class I (I, L, M and V) ADFLV_RS02705 PF08245 Mur ligase middle domain ADFLV_RS02715 PF02254 TrkA-N domain ADFLV_RS02715 PF00999 Sodium/hydrogen exchanger family ADFLV_RS02740 PF03824 High-affinity nickel-transport protein ADFLV_RS02760 PF04286 Protein of unknown function (DUF445) ADFLV_RS02775 PF02559 CarD-like/TRCF domain ADFLV_RS02775 PF00270 DEAD/DEAH box helicase ADFLV_RS02775 PF00271 Helicase conserved C-terminal domain ADFLV_RS02775 PF03461 TRCF domain ADFLV_RS02775 PF17757 UvrB interaction domain ADFLV_RS02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02790 PF00072 Response regulator receiver domain ADFLV_RS02790 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS02790 PF12833 Helix-turn-helix domain ADFLV_RS02790 PF07494 Two component regulator propeller ADFLV_RS02790 PF07495 Y_Y_Y domain ADFLV_RS02800 PF00563 EAL domain ADFLV_RS02800 PF01590 GAF domain ADFLV_RS02800 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS02800 PF00360 Phytochrome region ADFLV_RS02810 PF00072 Response regulator receiver domain ADFLV_RS02810 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS02825 PF02743 Cache domain ADFLV_RS02825 PF00672 HAMP domain ADFLV_RS02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS02830 PF00072 Response regulator receiver domain ADFLV_RS02830 PF02954 Bacterial regulatory protein, Fis family ADFLV_RS02830 PF00158 Sigma-54 interaction domain ADFLV_RS02835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS02835 PF08447 PAS fold ADFLV_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02840 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS02845 PF13277 YmdB-like protein ADFLV_RS02860 PF01209 ubiE/COQ5 methyltransferase family ADFLV_RS02865 PF13742 OB-fold nucleic acid binding domain ADFLV_RS02865 PF02601 Exonuclease VII, large subunit ADFLV_RS02870 PF01584 CheW-like domain ADFLV_RS02875 PF02954 Bacterial regulatory protein, Fis family ADFLV_RS02875 PF00072 Response regulator receiver domain ADFLV_RS02875 PF00158 Sigma-54 interaction domain ADFLV_RS02880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ADFLV_RS02890 PF02261 Aspartate decarboxylase ADFLV_RS02895 PF02575 YbaB/EbfC DNA-binding family ADFLV_RS02900 PF00348 Polyprenyl synthetase ADFLV_RS02905 PF00166 Chaperonin 10 Kd subunit ADFLV_RS02910 PF00118 TCP-1/cpn60 chaperonin family ADFLV_RS02920 PF00672 HAMP domain ADFLV_RS02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS02920 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS02925 PF00072 Response regulator receiver domain ADFLV_RS02925 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS02930 PF00149 Calcineurin-like phosphoesterase ADFLV_RS02940 PF04264 YceI-like domain ADFLV_RS02955 PF00005 ABC transporter ADFLV_RS02965 PF00459 Inositol monophosphatase family ADFLV_RS02970 PF01380 SIS domain ADFLV_RS02985 PF00438 S-adenosylmethionine synthetase, N-terminal domain ADFLV_RS02985 PF02772 S-adenosylmethionine synthetase, central domain ADFLV_RS02985 PF02773 S-adenosylmethionine synthetase, C-terminal domain ADFLV_RS02990 PF01039 Carboxyl transferase domain ADFLV_RS02990 PF17848 Acetyl-coA carboxylase zinc finger domain ADFLV_RS02995 PF02581 Thiamine monophosphate synthase ADFLV_RS03000 PF02590 Predicted SPOUT methyltransferase ADFLV_RS03010 PF01207 Dihydrouridine synthase (Dus) ADFLV_RS03020 PF01434 Peptidase family M41 ADFLV_RS03020 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS03020 PF17862 AAA+ lid domain ADFLV_RS03025 PF11849 Domain of unknown function (DUF3369) ADFLV_RS03030 PF08448 PAS fold ADFLV_RS03030 PF08447 PAS fold ADFLV_RS03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS03035 PF00682 HMGL-like ADFLV_RS03035 PF08502 LeuA allosteric (dimerisation) domain ADFLV_RS03040 PF07556 Protein of unknown function (DUF1538) ADFLV_RS03045 PF00085 Thioredoxin ADFLV_RS03055 PF00488 MutS domain V ADFLV_RS03055 PF05190 MutS family domain IV ADFLV_RS03055 PF05192 MutS domain III ADFLV_RS03055 PF05188 MutS domain II ADFLV_RS03055 PF01624 MutS domain I ADFLV_RS03075 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit ADFLV_RS03085 PF00005 ABC transporter ADFLV_RS03085 PF00664 ABC transporter transmembrane region ADFLV_RS03095 PF01266 FAD dependent oxidoreductase ADFLV_RS03100 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS03105 PF00977 Histidine biosynthesis protein ADFLV_RS03110 PF01370 NAD dependent epimerase/dehydratase family ADFLV_RS03110 PF08338 Domain of unknown function (DUF1731) ADFLV_RS03115 PF00117 Glutamine amidotransferase class-I ADFLV_RS03125 PF00679 Elongation factor G C-terminus ADFLV_RS03125 PF00009 Elongation factor Tu GTP binding domain ADFLV_RS03125 PF03144 Elongation factor Tu domain 2 ADFLV_RS03125 PF06421 GTP-binding protein LepA C-terminus ADFLV_RS03130 PF05736 OprF membrane domain ADFLV_RS03130 PF00691 OmpA family ADFLV_RS03135 PF05736 OprF membrane domain ADFLV_RS03135 PF00691 OmpA family ADFLV_RS03140 PF14572 Phosphoribosyl synthetase-associated domain ADFLV_RS03140 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ADFLV_RS03155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ADFLV_RS03160 PF00557 Metallopeptidase family M24 ADFLV_RS03160 PF01321 Creatinase/Prolidase N-terminal domain ADFLV_RS03165 PF01220 Dehydroquinase class II ADFLV_RS03170 PF01979 Amidohydrolase family ADFLV_RS03175 PF01343 Peptidase family S49 ADFLV_RS03180 PF00871 Acetokinase family ADFLV_RS03185 PF01515 Phosphate acetyl/butaryl transferase ADFLV_RS03190 PF00871 Acetokinase family ADFLV_RS03195 PF00871 Acetokinase family ADFLV_RS03200 PF00929 Exonuclease ADFLV_RS03200 PF07733 Bacterial DNA polymerase III alpha NTPase domain ADFLV_RS03200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ADFLV_RS03200 PF02811 PHP domain ADFLV_RS03200 PF11490 DNA polymerase III polC-type N-terminus II ADFLV_RS03200 PF14480 DNA polymerase III polC-type N-terminus I ADFLV_RS03200 PF14579 Helix-hairpin-helix motif ADFLV_RS03210 PF00474 Sodium:solute symporter family ADFLV_RS03220 PF00474 Sodium:solute symporter family ADFLV_RS03230 PF00929 Exonuclease ADFLV_RS03240 PF00474 Sodium:solute symporter family ADFLV_RS03250 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS03250 PF00072 Response regulator receiver domain ADFLV_RS03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS03255 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS03300 PF00994 Probable molybdopterin binding domain ADFLV_RS03300 PF02464 Competence-damaged protein ADFLV_RS03300 PF18146 Damage-inducible protein CinA KH domain ADFLV_RS03305 PF06039 Malate:quinone oxidoreductase (Mqo) ADFLV_RS03310 PF00133 tRNA synthetases class I (I, L, M and V) ADFLV_RS03310 PF08264 Anticodon-binding domain of tRNA ADFLV_RS03325 PF02875 Mur ligase family, glutamate ligase domain ADFLV_RS03325 PF08245 Mur ligase middle domain ADFLV_RS03335 PF08448 PAS fold ADFLV_RS03335 PF08447 PAS fold ADFLV_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS03350 PF01882 Protein of unknown function DUF58 ADFLV_RS03355 PF07726 ATPase family associated with various cellular activities (AAA) ADFLV_RS03355 PF17863 AAA lid domain ADFLV_RS03360 PF00318 Ribosomal protein S2 ADFLV_RS03365 PF00889 Elongation factor TS ADFLV_RS03370 PF00005 ABC transporter ADFLV_RS03380 PF00625 Guanylate kinase ADFLV_RS03385 PF08448 PAS fold ADFLV_RS03385 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS03385 PF00563 EAL domain ADFLV_RS03390 PF00403 Heavy-metal-associated domain ADFLV_RS03405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ADFLV_RS03405 PF00005 ABC transporter ADFLV_RS03410 PF00762 Ferrochelatase ADFLV_RS03425 PF01875 Memo-like protein ADFLV_RS03435 PF00005 ABC transporter ADFLV_RS03440 PF00950 ABC 3 transport family ADFLV_RS03455 PF17783 CvfB-like winged helix domain ADFLV_RS03455 PF13509 S1 domain ADFLV_RS03460 PF08534 Redoxin ADFLV_RS03465 PF08238 Sel1 repeat ADFLV_RS03465 PF13181 Tetratricopeptide repeat ADFLV_RS03475 PF00174 Oxidoreductase molybdopterin binding domain ADFLV_RS03480 PF01794 Ferric reductase like transmembrane component ADFLV_RS03485 PF13361 UvrD-like helicase C-terminal domain ADFLV_RS03485 PF00580 UvrD/REP helicase N-terminal domain ADFLV_RS03490 PF02254 TrkA-N domain ADFLV_RS03490 PF02080 TrkA-C domain ADFLV_RS03490 PF00999 Sodium/hydrogen exchanger family ADFLV_RS03495 PF00174 Oxidoreductase molybdopterin binding domain ADFLV_RS03555 PF01614 Bacterial transcriptional regulator ADFLV_RS03555 PF09339 IclR helix-turn-helix domain ADFLV_RS03560 PF01965 DJ-1/PfpI family ADFLV_RS03565 PF00753 Metallo-beta-lactamase superfamily ADFLV_RS03580 PF10458 Valyl tRNA synthetase tRNA binding arm ADFLV_RS03580 PF00133 tRNA synthetases class I (I, L, M and V) ADFLV_RS03580 PF08264 Anticodon-binding domain of tRNA ADFLV_RS03585 PF09962 Uncharacterized conserved protein (DUF2196) ADFLV_RS03590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ADFLV_RS03600 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS03610 PF07690 Major Facilitator Superfamily ADFLV_RS03615 PF01725 Ham1 family ADFLV_RS03625 PF00196 Bacterial regulatory proteins, luxR family ADFLV_RS03625 PF00072 Response regulator receiver domain ADFLV_RS03635 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ADFLV_RS03635 PF08479 POTRA domain, ShlB-type ADFLV_RS03655 PF03807 NADP oxidoreductase coenzyme F420-dependent ADFLV_RS03655 PF14748 Pyrroline-5-carboxylate reductase dimerisation ADFLV_RS03660 PF13525 Outer membrane lipoprotein ADFLV_RS03665 PF02190 ATP-dependent protease La (LON) substrate-binding domain ADFLV_RS03665 PF05362 Lon protease (S16) C-terminal proteolytic domain ADFLV_RS03665 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS03685 PF01451 Low molecular weight phosphotyrosine protein phosphatase ADFLV_RS03690 PF08447 PAS fold ADFLV_RS03690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS03690 PF13426 PAS domain ADFLV_RS03695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ADFLV_RS03700 PF17932 Tetracyclin repressor-like, C-terminal domain ADFLV_RS03700 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS03705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ADFLV_RS03705 PF00529 HlyD membrane-fusion protein of T1SS ADFLV_RS03720 PF00892 EamA-like transporter family ADFLV_RS03725 PF02203 Tar ligand binding domain homologue ADFLV_RS03725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS03725 PF00672 HAMP domain ADFLV_RS03740 PF02785 Biotin carboxylase C-terminal domain ADFLV_RS03740 PF00289 Biotin carboxylase, N-terminal domain ADFLV_RS03740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ADFLV_RS03745 PF08212 Lipocalin-like domain ADFLV_RS03750 PF02567 Phenazine biosynthesis-like protein ADFLV_RS03775 PF01883 Iron-sulfur cluster assembly protein ADFLV_RS03780 PF02657 Fe-S metabolism associated domain ADFLV_RS03785 PF00266 Aminotransferase class-V ADFLV_RS03795 PF00005 ABC transporter ADFLV_RS03800 PF01458 Uncharacterized protein family (UPF0051) ADFLV_RS03805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS03805 PF00989 PAS fold ADFLV_RS03805 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS03805 PF08447 PAS fold ADFLV_RS03810 PF13426 PAS domain ADFLV_RS03810 PF01740 STAS domain ADFLV_RS03815 PF00266 Aminotransferase class-V ADFLV_RS03820 PF01592 NifU-like N terminal domain ADFLV_RS03820 PF04324 BFD-like [2Fe-2S] binding domain ADFLV_RS03820 PF01106 NifU-like domain ADFLV_RS03825 PF01810 LysE type translocator ADFLV_RS03840 PF00571 CBS domain ADFLV_RS03840 PF01769 Divalent cation transporter ADFLV_RS03840 PF03448 MgtE intracellular N domain ADFLV_RS03845 PF01925 Sulfite exporter TauE/SafE ADFLV_RS03850 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS03850 PF17151 Periplasmic sensor domain ADFLV_RS03870 PF14698 Argininosuccinate lyase C-terminal ADFLV_RS03870 PF00206 Lyase ADFLV_RS03875 PF01584 CheW-like domain ADFLV_RS03875 PF00072 Response regulator receiver domain ADFLV_RS03880 PF00899 ThiF family ADFLV_RS03885 PF01272 Transcription elongation factor, GreA/GreB, C-term ADFLV_RS03885 PF03449 Transcription elongation factor, N-terminal ADFLV_RS03900 PF02151 UvrB/uvrC motif ADFLV_RS03900 PF12344 Ultra-violet resistance protein B ADFLV_RS03900 PF17757 UvrB interaction domain ADFLV_RS03900 PF04851 Type III restriction enzyme, res subunit ADFLV_RS03900 PF00271 Helicase conserved C-terminal domain ADFLV_RS03905 PF00730 HhH-GPD superfamily base excision DNA repair protein ADFLV_RS03905 PF00633 Helix-hairpin-helix motif ADFLV_RS03905 PF10576 Iron-sulfur binding domain of endonuclease III ADFLV_RS03915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ADFLV_RS03915 PF01266 FAD dependent oxidoreductase ADFLV_RS03940 PF02502 Ribose/Galactose Isomerase ADFLV_RS03945 PF10502 Signal peptidase, peptidase S26 ADFLV_RS03950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ADFLV_RS03950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ADFLV_RS03955 PF01386 Ribosomal L25p family ADFLV_RS03955 PF14693 Ribosomal protein TL5, C-terminal domain ADFLV_RS03960 PF01195 Peptidyl-tRNA hydrolase ADFLV_RS03975 PF01520 N-acetylmuramoyl-L-alanine amidase ADFLV_RS03985 PF00579 tRNA synthetases class I (W and Y) ADFLV_RS03985 PF01479 S4 domain ADFLV_RS03990 PF13291 ACT domain ADFLV_RS03990 PF02824 TGS domain ADFLV_RS03990 PF04607 Region found in RelA / SpoT proteins ADFLV_RS03995 PF01192 RNA polymerase Rpb6 ADFLV_RS04000 PF00696 Amino acid kinase family ADFLV_RS04010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ADFLV_RS04015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ADFLV_RS04020 PF00425 chorismate binding enzyme ADFLV_RS04020 PF04715 Anthranilate synthase component I, N terminal region ADFLV_RS04030 PF00464 Serine hydroxymethyltransferase ADFLV_RS04035 PF00152 tRNA synthetases class II (D, K and N) ADFLV_RS04035 PF01336 OB-fold nucleic acid binding domain ADFLV_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS04045 PF08447 PAS fold ADFLV_RS04045 PF08448 PAS fold ADFLV_RS04050 PF04551 GcpE protein ADFLV_RS04055 PF17151 Periplasmic sensor domain ADFLV_RS04055 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS04060 PF03796 DnaB-like helicase C terminal domain ADFLV_RS04060 PF00772 DnaB-like helicase N terminal domain ADFLV_RS04075 PF16363 GDP-mannose 4,6 dehydratase ADFLV_RS04080 PF00483 Nucleotidyl transferase ADFLV_RS04085 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ADFLV_RS04090 PF04321 RmlD substrate binding domain ADFLV_RS04100 PF16363 GDP-mannose 4,6 dehydratase ADFLV_RS04115 PF13419 Haloacid dehalogenase-like hydrolase ADFLV_RS04130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ADFLV_RS04160 PF00535 Glycosyl transferase family 2 ADFLV_RS04165 PF01370 NAD dependent epimerase/dehydratase family ADFLV_RS04175 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ADFLV_RS04185 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ADFLV_RS04190 PF00953 Glycosyl transferase family 4 ADFLV_RS04195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ADFLV_RS04200 PF02719 Polysaccharide biosynthesis protein ADFLV_RS04210 PF14743 DNA ligase OB-like domain ADFLV_RS04210 PF01068 ATP dependent DNA ligase domain ADFLV_RS04215 PF00156 Phosphoribosyl transferase domain ADFLV_RS04220 PF00291 Pyridoxal-phosphate dependent enzyme ADFLV_RS04230 PF00883 Cytosol aminopeptidase family, catalytic domain ADFLV_RS04230 PF02789 Cytosol aminopeptidase family, N-terminal domain ADFLV_RS04235 PF02472 Biopolymer transport protein ExbD/TolR ADFLV_RS04240 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS04260 PF00005 ABC transporter ADFLV_RS04260 PF02687 FtsX-like permease family ADFLV_RS04260 PF12704 MacB-like periplasmic core domain ADFLV_RS04265 PF00005 ABC transporter ADFLV_RS04265 PF02687 FtsX-like permease family ADFLV_RS04265 PF12704 MacB-like periplasmic core domain ADFLV_RS04310 PF01475 Ferric uptake regulator family ADFLV_RS04320 PF00206 Lyase ADFLV_RS04320 PF10415 Fumarase C C-terminus ADFLV_RS04350 PF02421 Ferrous iron transport protein B ADFLV_RS04350 PF04023 FeoA domain ADFLV_RS04350 PF07664 Ferrous iron transport protein B C terminus ADFLV_RS04350 PF17910 FeoB cytosolic helical domain ADFLV_RS04350 PF07670 Nucleoside recognition ADFLV_RS04355 PF04023 FeoA domain ADFLV_RS04365 PF07715 TonB-dependent Receptor Plug Domain ADFLV_RS04365 PF00593 TonB dependent receptor ADFLV_RS04370 PF00756 Putative esterase ADFLV_RS04375 PF13426 PAS domain ADFLV_RS04375 PF07568 Histidine kinase ADFLV_RS04375 PF13581 Histidine kinase-like ATPase domain ADFLV_RS04380 PF00072 Response regulator receiver domain ADFLV_RS04385 PF07715 TonB-dependent Receptor Plug Domain ADFLV_RS04385 PF00593 TonB dependent receptor ADFLV_RS04400 PF00072 Response regulator receiver domain ADFLV_RS04400 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS04420 PF08479 POTRA domain, ShlB-type ADFLV_RS04420 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ADFLV_RS04425 PF06071 Protein of unknown function (DUF933) ADFLV_RS04425 PF01926 50S ribosome-binding GTPase ADFLV_RS04445 PF06865 Pyrimidine/purine nucleoside phosphorylase ADFLV_RS04470 PF00586 AIR synthase related protein, N-terminal domain ADFLV_RS04470 PF02769 AIR synthase related protein, C-terminal domain ADFLV_RS04475 PF01142 tRNA pseudouridine synthase D (TruD) ADFLV_RS04485 PF00593 TonB dependent receptor ADFLV_RS04485 PF07715 TonB-dependent Receptor Plug Domain ADFLV_RS04490 PF02203 Tar ligand binding domain homologue ADFLV_RS04490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS04490 PF00672 HAMP domain ADFLV_RS04495 PF01330 RuvA N terminal domain ADFLV_RS04495 PF07499 RuvA, C-terminal domain ADFLV_RS04500 PF07478 D-ala D-ala ligase C-terminus ADFLV_RS04500 PF01820 D-ala D-ala ligase N-terminus ADFLV_RS04510 PF08245 Mur ligase middle domain ADFLV_RS04510 PF02875 Mur ligase family, glutamate ligase domain ADFLV_RS04510 PF01225 Mur ligase family, catalytic domain ADFLV_RS04515 PF01230 HIT domain ADFLV_RS04525 PF01266 FAD dependent oxidoreductase ADFLV_RS04530 PF00338 Ribosomal protein S10p/S20e ADFLV_RS04535 PF00297 Ribosomal protein L3 ADFLV_RS04540 PF00573 Ribosomal protein L4/L1 family ADFLV_RS04545 PF00276 Ribosomal protein L23 ADFLV_RS04550 PF03947 Ribosomal Proteins L2, C-terminal domain ADFLV_RS04550 PF00181 Ribosomal Proteins L2, RNA binding domain ADFLV_RS04555 PF00203 Ribosomal protein S19 ADFLV_RS04560 PF00237 Ribosomal protein L22p/L17e ADFLV_RS04565 PF07650 KH domain ADFLV_RS04565 PF00189 Ribosomal protein S3, C-terminal domain ADFLV_RS04570 PF00252 Ribosomal protein L16p/L10e ADFLV_RS04575 PF00831 Ribosomal L29 protein ADFLV_RS04580 PF00366 Ribosomal protein S17 ADFLV_RS04585 PF00238 Ribosomal protein L14p/L23e ADFLV_RS04590 PF00467 KOW motif ADFLV_RS04590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ADFLV_RS04595 PF00673 ribosomal L5P family C-terminus ADFLV_RS04595 PF00281 Ribosomal protein L5 ADFLV_RS04600 PF00253 Ribosomal protein S14p/S29e ADFLV_RS04605 PF00410 Ribosomal protein S8 ADFLV_RS04610 PF00347 Ribosomal protein L6 ADFLV_RS04615 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ADFLV_RS04620 PF03719 Ribosomal protein S5, C-terminal domain ADFLV_RS04620 PF00333 Ribosomal protein S5, N-terminal domain ADFLV_RS04625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ADFLV_RS04630 PF00344 SecY translocase ADFLV_RS04635 PF00557 Metallopeptidase family M24 ADFLV_RS04640 PF01176 Translation initiation factor 1A / IF-1 ADFLV_RS04650 PF03167 Uracil DNA glycosylase superfamily ADFLV_RS04660 PF02938 GAD domain ADFLV_RS04660 PF00152 tRNA synthetases class II (D, K and N) ADFLV_RS04660 PF01336 OB-fold nucleic acid binding domain ADFLV_RS04675 PF04055 Radical SAM superfamily ADFLV_RS04675 PF08497 Radical SAM N-terminal ADFLV_RS04680 PF05191 Adenylate kinase, active site lid ADFLV_RS04700 PF00842 Alanine racemase, C-terminal domain ADFLV_RS04700 PF01168 Alanine racemase, N-terminal domain ADFLV_RS04705 PF08459 UvrC Helix-hairpin-helix N-terminal ADFLV_RS04705 PF01541 GIY-YIG catalytic domain ADFLV_RS04705 PF02151 UvrB/uvrC motif ADFLV_RS04715 PF08448 PAS fold ADFLV_RS04715 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS04725 PF04973 Nicotinamide mononucleotide transporter ADFLV_RS04730 PF00255 Glutathione peroxidase ADFLV_RS04735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS04735 PF02203 Tar ligand binding domain homologue ADFLV_RS04735 PF00672 HAMP domain ADFLV_RS04740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS04740 PF00672 HAMP domain ADFLV_RS04740 PF12729 Four helix bundle sensory module for signal transduction ADFLV_RS04745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS04745 PF02203 Tar ligand binding domain homologue ADFLV_RS04745 PF00672 HAMP domain ADFLV_RS04750 PF02203 Tar ligand binding domain homologue ADFLV_RS04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS04750 PF00672 HAMP domain ADFLV_RS04760 PF00072 Response regulator receiver domain ADFLV_RS04760 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS04765 PF00072 Response regulator receiver domain ADFLV_RS04770 PF00072 Response regulator receiver domain ADFLV_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS04770 PF09308 LuxQ, periplasmic ADFLV_RS04770 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS04785 PF00293 NUDIX domain ADFLV_RS04785 PF13344 Haloacid dehalogenase-like hydrolase ADFLV_RS04800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ADFLV_RS04810 PF03480 Bacterial extracellular solute-binding protein, family 7 ADFLV_RS04815 PF04115 Ureidoglycolate lyase ADFLV_RS04825 PF02653 Branched-chain amino acid transport system / permease component ADFLV_RS04835 PF12399 Branched-chain amino acid ATP-binding cassette transporter ADFLV_RS04835 PF00005 ABC transporter ADFLV_RS04840 PF00005 ABC transporter ADFLV_RS04850 PF01774 UreD urease accessory protein ADFLV_RS04855 PF01979 Amidohydrolase family ADFLV_RS04860 PF00860 Permease family ADFLV_RS04870 PF01014 Uricase ADFLV_RS04870 PF09349 OHCU decarboxylase ADFLV_RS04875 PF03561 Allantoicase repeat ADFLV_RS04880 PF04115 Ureidoglycolate lyase ADFLV_RS04890 PF00576 HIUase/Transthyretin family ADFLV_RS04900 PF00860 Permease family ADFLV_RS04905 PF01979 Amidohydrolase family ADFLV_RS04910 PF01274 Malate synthase ADFLV_RS04915 PF00941 FAD binding domain in molybdopterin dehydrogenase ADFLV_RS04915 PF03450 CO dehydrogenase flavoprotein C-terminal domain ADFLV_RS04920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ADFLV_RS04920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ADFLV_RS04925 PF13478 XdhC Rossmann domain ADFLV_RS04925 PF02625 XdhC and CoxI family ADFLV_RS04930 PF00547 Urease, gamma subunit ADFLV_RS04930 PF00699 Urease beta subunit ADFLV_RS04935 PF00449 Urease alpha-subunit, N-terminal domain ADFLV_RS04935 PF01979 Amidohydrolase family ADFLV_RS04940 PF05194 UreE urease accessory protein, C-terminal domain ADFLV_RS04950 PF02492 CobW/HypB/UreG, nucleotide-binding domain ADFLV_RS04955 PF00873 AcrB/AcrD/AcrF family ADFLV_RS04960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ADFLV_RS04970 PF01047 MarR family ADFLV_RS04980 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS04980 PF08448 PAS fold ADFLV_RS04985 PF03372 Endonuclease/Exonuclease/phosphatase family ADFLV_RS05020 PF00342 Phosphoglucose isomerase ADFLV_RS05025 PF00483 Nucleotidyl transferase ADFLV_RS05030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ADFLV_RS05030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ADFLV_RS05030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ADFLV_RS05030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ADFLV_RS05065 PF00860 Permease family ADFLV_RS05070 PF00156 Phosphoribosyl transferase domain ADFLV_RS05080 PF04241 Protein of unknown function (DUF423) ADFLV_RS05095 PF00860 Permease family ADFLV_RS05100 PF04461 Protein of unknown function (DUF520) ADFLV_RS05110 PF00072 Response regulator receiver domain ADFLV_RS05110 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS05120 PF00293 NUDIX domain ADFLV_RS05130 PF02253 Phospholipase A1 ADFLV_RS05135 PF00834 Ribulose-phosphate 3 epimerase family ADFLV_RS05140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ADFLV_RS05145 PF07733 Bacterial DNA polymerase III alpha NTPase domain ADFLV_RS05145 PF14579 Helix-hairpin-helix motif ADFLV_RS05145 PF14480 DNA polymerase III polC-type N-terminus I ADFLV_RS05145 PF02811 PHP domain ADFLV_RS05145 PF00929 Exonuclease ADFLV_RS05145 PF11490 DNA polymerase III polC-type N-terminus II ADFLV_RS05145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ADFLV_RS05150 PF13291 ACT domain ADFLV_RS05150 PF04607 Region found in RelA / SpoT proteins ADFLV_RS05150 PF02824 TGS domain ADFLV_RS05160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ADFLV_RS05165 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ADFLV_RS05165 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ADFLV_RS05165 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ADFLV_RS05175 PF05175 Methyltransferase small domain ADFLV_RS05180 PF03692 Putative zinc- or iron-chelating domain ADFLV_RS05190 PF00218 Indole-3-glycerol phosphate synthase ADFLV_RS05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS05195 PF03466 LysR substrate binding domain ADFLV_RS05205 PF08447 PAS fold ADFLV_RS05205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS05210 PF02203 Tar ligand binding domain homologue ADFLV_RS05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS05210 PF00672 HAMP domain ADFLV_RS05215 PF01168 Alanine racemase, N-terminal domain ADFLV_RS05220 PF02163 Peptidase family M50 ADFLV_RS05220 PF17820 PDZ domain ADFLV_RS05225 PF01066 CDP-alcohol phosphatidyltransferase ADFLV_RS05235 PF00701 Dihydrodipicolinate synthetase family ADFLV_RS05250 PF01180 Dihydroorotate dehydrogenase ADFLV_RS05255 PF00664 ABC transporter transmembrane region ADFLV_RS05255 PF00005 ABC transporter ADFLV_RS05260 PF03023 Lipid II flippase MurJ ADFLV_RS05270 PF02915 Rubrerythrin ADFLV_RS05280 PF02130 Uncharacterized protein family UPF0054 ADFLV_RS05285 PF18073 Rubredoxin metal binding domain ADFLV_RS05305 PF03797 Autotransporter beta-domain ADFLV_RS05325 PF03150 Di-haem cytochrome c peroxidase ADFLV_RS05325 PF00034 Cytochrome c ADFLV_RS05325 PF14376 Haem-binding domain ADFLV_RS05330 PF00563 EAL domain ADFLV_RS05330 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS05330 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS05340 PF00448 SRP54-type protein, GTPase domain ADFLV_RS05345 PF00578 AhpC/TSA family ADFLV_RS05350 PF01812 5-formyltetrahydrofolate cyclo-ligase family ADFLV_RS05355 PF00013 KH domain ADFLV_RS05355 PF01966 HD domain ADFLV_RS05355 PF12072 Domain of unknown function (DUF3552) ADFLV_RS05365 PF12911 N-terminal TM domain of oligopeptide transport permease C ADFLV_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS05375 PF00106 short chain dehydrogenase ADFLV_RS05385 PF02384 N-6 DNA Methylase ADFLV_RS05390 PF01420 Type I restriction modification DNA specificity domain ADFLV_RS05410 PF11867 Domain of unknown function (DUF3387) ADFLV_RS05410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ADFLV_RS05410 PF18766 SWI2/SNF2 ATPase ADFLV_RS05415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ADFLV_RS05425 PF00072 Response regulator receiver domain ADFLV_RS05425 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS05440 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS05440 PF17151 Periplasmic sensor domain ADFLV_RS05445 PF09424 Yqey-like protein ADFLV_RS05455 PF01545 Cation efflux family ADFLV_RS05455 PF16916 Dimerisation domain of Zinc Transporter ADFLV_RS05460 PF00155 Aminotransferase class I and II ADFLV_RS05465 PF01863 Protein of unknown function DUF45 ADFLV_RS05475 PF00890 FAD binding domain ADFLV_RS05475 PF02910 Fumarate reductase flavoprotein C-term ADFLV_RS05480 PF03600 Citrate transporter ADFLV_RS05485 PF00958 GMP synthase C terminal domain ADFLV_RS05485 PF02540 NAD synthase ADFLV_RS05485 PF00117 Glutamine amidotransferase class-I ADFLV_RS05500 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ADFLV_RS05535 PF00892 EamA-like transporter family ADFLV_RS05555 PF00561 alpha/beta hydrolase fold ADFLV_RS05560 PF01553 Acyltransferase ADFLV_RS05565 PF03749 Sugar fermentation stimulation protein RE domain ADFLV_RS05565 PF17746 SfsA N-terminal OB domain ADFLV_RS05570 PF13520 Amino acid permease ADFLV_RS05590 PF03062 MBOAT, membrane-bound O-acyltransferase family ADFLV_RS05595 PF00849 RNA pseudouridylate synthase ADFLV_RS05600 PF00589 Phage integrase family ADFLV_RS05700 PF03960 ArsC family ADFLV_RS05710 PF03449 Transcription elongation factor, N-terminal ADFLV_RS05710 PF01272 Transcription elongation factor, GreA/GreB, C-term ADFLV_RS05715 PF17785 PUA-like domain ADFLV_RS05715 PF10672 S-adenosylmethionine-dependent methyltransferase ADFLV_RS05720 PF07690 Major Facilitator Superfamily ADFLV_RS05725 PF07729 FCD domain ADFLV_RS05725 PF00392 Bacterial regulatory proteins, gntR family ADFLV_RS05730 PF07690 Major Facilitator Superfamily ADFLV_RS05750 PF00117 Glutamine amidotransferase class-I ADFLV_RS05750 PF00958 GMP synthase C terminal domain ADFLV_RS05750 PF02540 NAD synthase ADFLV_RS05785 PF01595 Cyclin M transmembrane N-terminal domain ADFLV_RS05785 PF00571 CBS domain ADFLV_RS05790 PF01471 Putative peptidoglycan binding domain ADFLV_RS05790 PF03734 L,D-transpeptidase catalytic domain ADFLV_RS05800 PF01594 AI-2E family transporter ADFLV_RS05815 PF03471 Transporter associated domain ADFLV_RS05815 PF01595 Cyclin M transmembrane N-terminal domain ADFLV_RS05815 PF00571 CBS domain ADFLV_RS05830 PF17755 UvrA DNA-binding domain ADFLV_RS05830 PF17760 UvrA interaction domain ADFLV_RS05830 PF00005 ABC transporter ADFLV_RS05855 PF16925 Tetracyclin repressor-like, C-terminal domain ADFLV_RS05855 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS05870 PF07478 D-ala D-ala ligase C-terminus ADFLV_RS05870 PF01820 D-ala D-ala ligase N-terminus ADFLV_RS05875 PF00271 Helicase conserved C-terminal domain ADFLV_RS05875 PF00270 DEAD/DEAH box helicase ADFLV_RS05880 PF10442 FIST C domain ADFLV_RS05880 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS05880 PF00563 EAL domain ADFLV_RS05880 PF08495 FIST N domain ADFLV_RS05885 PF08447 PAS fold ADFLV_RS05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS05890 PF00672 HAMP domain ADFLV_RS05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS05890 PF02203 Tar ligand binding domain homologue ADFLV_RS05905 PF00132 Bacterial transferase hexapeptide (six repeats) ADFLV_RS05905 PF06426 Serine acetyltransferase, N-terminal ADFLV_RS05910 PF17944 Arginine decarboxylase C-terminal helical extension ADFLV_RS05910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ADFLV_RS05910 PF17810 Arginine decarboxylase helical bundle domain ADFLV_RS05915 PF03129 Anticodon binding domain ADFLV_RS05915 PF13393 Histidyl-tRNA synthetase ADFLV_RS05920 PF02223 Thymidylate kinase ADFLV_RS05925 PF01467 Cytidylyltransferase-like ADFLV_RS05930 PF02441 Flavoprotein ADFLV_RS05940 PF01281 Ribosomal protein L9, N-terminal domain ADFLV_RS05940 PF03948 Ribosomal protein L9, C-terminal domain ADFLV_RS05945 PF00227 Proteasome subunit ADFLV_RS05950 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS05950 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS05960 PF01026 TatD related DNase ADFLV_RS05970 PF05036 Sporulation related domain ADFLV_RS05970 PF03330 Lytic transglycolase ADFLV_RS05975 PF00475 Imidazoleglycerol-phosphate dehydratase ADFLV_RS05995 PF01926 50S ribosome-binding GTPase ADFLV_RS06000 PF00583 Acetyltransferase (GNAT) family ADFLV_RS06010 PF01118 Semialdehyde dehydrogenase, NAD binding domain ADFLV_RS06020 PF00155 Aminotransferase class I and II ADFLV_RS06020 PF00392 Bacterial regulatory proteins, gntR family ADFLV_RS06025 PF01243 Pyridoxamine 5'-phosphate oxidase ADFLV_RS06035 PF00873 AcrB/AcrD/AcrF family ADFLV_RS06040 PF00873 AcrB/AcrD/AcrF family ADFLV_RS06045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ADFLV_RS06055 PF00581 Rhodanese-like domain ADFLV_RS06060 PF13426 PAS domain ADFLV_RS06060 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS06060 PF00672 HAMP domain ADFLV_RS06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS06065 PF00813 FliP family ADFLV_RS06070 PF00905 Penicillin binding protein transpeptidase domain ADFLV_RS06070 PF05223 NTF2-like N-terminal transpeptidase domain ADFLV_RS06070 PF03717 Penicillin-binding Protein dimerisation domain ADFLV_RS06095 PF00732 GMC oxidoreductase ADFLV_RS06095 PF05199 GMC oxidoreductase ADFLV_RS06105 PF03960 ArsC family ADFLV_RS06125 PF02491 SHS2 domain inserted in FTSA ADFLV_RS06130 PF12327 FtsZ family, C-terminal domain ADFLV_RS06130 PF00091 Tubulin/FtsZ family, GTPase domain ADFLV_RS06135 PF04143 Sulphur transport ADFLV_RS06160 PF00561 alpha/beta hydrolase fold ADFLV_RS06170 PF02609 Exonuclease VII small subunit ADFLV_RS06180 PF00899 ThiF family ADFLV_RS06185 PF02142 MGS-like domain ADFLV_RS06185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ADFLV_RS06185 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ADFLV_RS06275 PF01131 DNA topoisomerase ADFLV_RS06275 PF01751 Toprim domain ADFLV_RS06320 PF02534 Type IV secretory system Conjugative DNA transfer ADFLV_RS06325 PF00437 Type II/IV secretion system protein ADFLV_RS06330 PF03743 Bacterial conjugation TrbI-like protein ADFLV_RS06335 PF03524 Conjugal transfer protein ADFLV_RS06370 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ADFLV_RS06405 PF00589 Phage integrase family ADFLV_RS06530 PF00149 Calcineurin-like phosphoesterase ADFLV_RS06545 PF07728 AAA domain (dynein-related subfamily) ADFLV_RS06545 PF12102 Domain of unknown function (DUF3578) ADFLV_RS06555 PF12102 Domain of unknown function (DUF3578) ADFLV_RS06555 PF07728 AAA domain (dynein-related subfamily) ADFLV_RS06610 PF02146 Sir2 family ADFLV_RS06640 PF02146 Sir2 family ADFLV_RS06700 PF00589 Phage integrase family ADFLV_RS06705 PF00589 Phage integrase family ADFLV_RS06705 PF02899 Phage integrase, N-terminal SAM-like domain ADFLV_RS06715 PF01867 CRISPR associated protein Cas1 ADFLV_RS06720 PF09827 CRISPR associated protein Cas2 ADFLV_RS06740 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ADFLV_RS06765 PF00589 Phage integrase family ADFLV_RS06770 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS06775 PF13677 Membrane MotB of proton-channel complex MotA/MotB ADFLV_RS06775 PF00691 OmpA family ADFLV_RS06780 PF03741 Integral membrane protein TerC family ADFLV_RS06785 PF03600 Citrate transporter ADFLV_RS06815 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit ADFLV_RS06835 PF00005 ABC transporter ADFLV_RS06840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ADFLV_RS06845 PF13411 MerR HTH family regulatory protein ADFLV_RS06850 PF00226 DnaJ domain ADFLV_RS06850 PF01556 DnaJ C terminal domain ADFLV_RS06855 PF00989 PAS fold ADFLV_RS06855 PF08447 PAS fold ADFLV_RS06855 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS06865 PF00072 Response regulator receiver domain ADFLV_RS06875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ADFLV_RS06875 PF01266 FAD dependent oxidoreductase ADFLV_RS06890 PF00216 Bacterial DNA-binding protein ADFLV_RS06900 PF01795 MraW methylase family ADFLV_RS06910 PF00873 AcrB/AcrD/AcrF family ADFLV_RS06930 PF13193 AMP-binding enzyme C-terminal domain ADFLV_RS06930 PF00501 AMP-binding enzyme ADFLV_RS06935 PF13941 MutL protein ADFLV_RS06940 PF06368 Methylaspartate mutase E chain (MutE) ADFLV_RS06945 PF02310 B12 binding domain ADFLV_RS06950 PF00056 lactate/malate dehydrogenase, NAD binding domain ADFLV_RS06950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ADFLV_RS06955 PF03971 Monomeric isocitrate dehydrogenase ADFLV_RS06970 PF12704 MacB-like periplasmic core domain ADFLV_RS06970 PF02687 FtsX-like permease family ADFLV_RS06975 PF01043 SecA preprotein cross-linking domain ADFLV_RS06975 PF07517 SecA DEAD-like domain ADFLV_RS06975 PF00271 Helicase conserved C-terminal domain ADFLV_RS06975 PF02810 SEC-C motif ADFLV_RS06975 PF07516 SecA Wing and Scaffold domain ADFLV_RS06990 PF12833 Helix-turn-helix domain ADFLV_RS06995 PF00465 Iron-containing alcohol dehydrogenase ADFLV_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS07005 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS07005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ADFLV_RS07010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ADFLV_RS07020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ADFLV_RS07020 PF04324 BFD-like [2Fe-2S] binding domain ADFLV_RS07020 PF18267 Rubredoxin NAD+ reductase C-terminal domain ADFLV_RS07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS07020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ADFLV_RS07025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ADFLV_RS07025 PF01568 Molydopterin dinucleotide binding domain ADFLV_RS07025 PF00384 Molybdopterin oxidoreductase ADFLV_RS07025 PF04324 BFD-like [2Fe-2S] binding domain ADFLV_RS07030 PF08495 FIST N domain ADFLV_RS07030 PF00563 EAL domain ADFLV_RS07030 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS07030 PF10442 FIST C domain ADFLV_RS07035 PF03793 PASTA domain ADFLV_RS07035 PF00069 Protein kinase domain ADFLV_RS07040 PF07690 Major Facilitator Superfamily ADFLV_RS07045 PF03738 Glutathionylspermidine synthase preATP-grasp ADFLV_RS07055 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS07055 PF08448 PAS fold ADFLV_RS07060 PF02463 RecF/RecN/SMC N terminal domain ADFLV_RS07085 PF07568 Histidine kinase ADFLV_RS07085 PF12282 Signal transduction histidine kinase ADFLV_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS07090 PF00072 Response regulator receiver domain ADFLV_RS07090 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS07100 PF00072 Response regulator receiver domain ADFLV_RS07100 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS07195 PF06250 YhcG PDDEXK nuclease domain ADFLV_RS07195 PF17761 DUF1016 N-terminal domain ADFLV_RS07245 PF01022 Bacterial regulatory protein, arsR family ADFLV_RS07355 PF00091 Tubulin/FtsZ family, GTPase domain ADFLV_RS07355 PF12327 FtsZ family, C-terminal domain ADFLV_RS07370 PF08501 Shikimate dehydrogenase substrate binding domain ADFLV_RS07385 PF00390 Malic enzyme, N-terminal domain ADFLV_RS07385 PF03949 Malic enzyme, NAD binding domain ADFLV_RS07385 PF01515 Phosphate acetyl/butaryl transferase ADFLV_RS07390 PF00551 Formyl transferase ADFLV_RS07390 PF01842 ACT domain ADFLV_RS07395 PF00588 SpoU rRNA Methylase family ADFLV_RS07410 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS07410 PF00072 Response regulator receiver domain ADFLV_RS07420 PF16200 C-terminal region of band_7 ADFLV_RS07420 PF01145 SPFH domain / Band 7 family ADFLV_RS07440 PF01654 Cytochrome bd terminal oxidase subunit I ADFLV_RS07465 PF10417 C-terminal domain of 1-Cys peroxiredoxin ADFLV_RS07465 PF00578 AhpC/TSA family ADFLV_RS07480 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS07485 PF02472 Biopolymer transport protein ExbD/TolR ADFLV_RS07500 PF13476 AAA domain ADFLV_RS07530 PF03737 Aldolase/RraA ADFLV_RS07535 PF05971 RNA methyltransferase ADFLV_RS07540 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ADFLV_RS07545 PF01479 S4 domain ADFLV_RS07545 PF00849 RNA pseudouridylate synthase ADFLV_RS07555 PF13419 Haloacid dehalogenase-like hydrolase ADFLV_RS07575 PF00593 TonB dependent receptor ADFLV_RS07575 PF07715 TonB-dependent Receptor Plug Domain ADFLV_RS07580 PF01497 Periplasmic binding protein ADFLV_RS07585 PF00005 ABC transporter ADFLV_RS07590 PF01032 FecCD transport family ADFLV_RS07615 PF00248 Aldo/keto reductase family ADFLV_RS07620 PF00672 HAMP domain ADFLV_RS07620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS07620 PF02203 Tar ligand binding domain homologue ADFLV_RS07635 PF03061 Thioesterase superfamily ADFLV_RS07645 PF01435 Peptidase family M48 ADFLV_RS07645 PF16491 CAAX prenyl protease N-terminal, five membrane helices ADFLV_RS07650 PF02646 RmuC family ADFLV_RS07660 PF04228 Putative neutral zinc metallopeptidase ADFLV_RS07670 PF00994 Probable molybdopterin binding domain ADFLV_RS07670 PF03454 MoeA C-terminal region (domain IV) ADFLV_RS07670 PF03453 MoeA N-terminal region (domain I and II) ADFLV_RS07685 PF01171 PP-loop family ADFLV_RS07690 PF04463 Protein of unknown function (DUF523) ADFLV_RS07695 PF00085 Thioredoxin ADFLV_RS07710 PF00563 EAL domain ADFLV_RS07710 PF01590 GAF domain ADFLV_RS07710 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS07710 PF00360 Phytochrome region ADFLV_RS07720 PF02541 Ppx/GppA phosphatase family ADFLV_RS07730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ADFLV_RS07730 PF00205 Thiamine pyrophosphate enzyme, central domain ADFLV_RS07730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ADFLV_RS07735 PF10369 Small subunit of acetolactate synthase ADFLV_RS07740 PF00132 Bacterial transferase hexapeptide (six repeats) ADFLV_RS07740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ADFLV_RS07745 PF01580 FtsK/SpoIIIE family ADFLV_RS07745 PF09397 Ftsk gamma domain ADFLV_RS07745 PF17854 FtsK alpha domain ADFLV_RS07750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ADFLV_RS07750 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ADFLV_RS07755 PF01926 50S ribosome-binding GTPase ADFLV_RS07755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ADFLV_RS07760 PF01740 STAS domain ADFLV_RS07760 PF00916 Sulfate permease family ADFLV_RS07770 PF02844 Phosphoribosylglycinamide synthetase, N domain ADFLV_RS07770 PF02843 Phosphoribosylglycinamide synthetase, C domain ADFLV_RS07770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ADFLV_RS07780 PF04453 LPS transport system D ADFLV_RS07780 PF03968 OstA-like protein ADFLV_RS07790 PF00013 KH domain ADFLV_RS07790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ADFLV_RS07790 PF03725 3' exoribonuclease family, domain 2 ADFLV_RS07790 PF00575 S1 RNA binding domain ADFLV_RS07790 PF01138 3' exoribonuclease family, domain 1 ADFLV_RS07795 PF00072 Response regulator receiver domain ADFLV_RS07800 PF09078 CheY binding ADFLV_RS07800 PF01584 CheW-like domain ADFLV_RS07800 PF02895 Signal transducing histidine kinase, homodimeric domain ADFLV_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS07800 PF01627 Hpt domain ADFLV_RS07805 PF03705 CheR methyltransferase, all-alpha domain ADFLV_RS07805 PF01739 CheR methyltransferase, SAM binding domain ADFLV_RS07810 PF03975 CheD chemotactic sensory transduction ADFLV_RS07815 PF01339 CheB methylesterase ADFLV_RS07815 PF00072 Response regulator receiver domain ADFLV_RS07825 PF00589 Phage integrase family ADFLV_RS07825 PF18644 Phage integrase SAM-like domain ADFLV_RS07845 PF01432 Peptidase family M3 ADFLV_RS07850 PF05175 Methyltransferase small domain ADFLV_RS07850 PF17827 PrmC N-terminal domain ADFLV_RS07855 PF06969 HemN C-terminal domain ADFLV_RS07855 PF04055 Radical SAM superfamily ADFLV_RS07860 PF00293 NUDIX domain ADFLV_RS07865 PF01842 ACT domain ADFLV_RS07865 PF13840 ACT domain ADFLV_RS07865 PF00696 Amino acid kinase family ADFLV_RS07880 PF00809 Pterin binding enzyme ADFLV_RS07885 PF02153 Prephenate dehydrogenase ADFLV_RS07885 PF01842 ACT domain ADFLV_RS07890 PF07244 Surface antigen variable number repeat ADFLV_RS07890 PF01103 Surface antigen ADFLV_RS07895 PF04055 Radical SAM superfamily ADFLV_RS07900 PF05193 Peptidase M16 inactive domain ADFLV_RS07905 PF00749 tRNA synthetases class I (E and Q), catalytic domain ADFLV_RS07935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ADFLV_RS07945 PF01588 Putative tRNA binding domain ADFLV_RS07945 PF00133 tRNA synthetases class I (I, L, M and V) ADFLV_RS07945 PF09334 tRNA synthetases class I (M) ADFLV_RS07970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ADFLV_RS07975 PF01293 Phosphoenolpyruvate carboxykinase ADFLV_RS07985 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ADFLV_RS07985 PF00925 GTP cyclohydrolase II ADFLV_RS08030 PF02899 Phage integrase, N-terminal SAM-like domain ADFLV_RS08030 PF00589 Phage integrase family ADFLV_RS08095 PF00296 Luciferase-like monooxygenase ADFLV_RS08100 PF02092 Glycyl-tRNA synthetase beta subunit ADFLV_RS08125 PF02527 rRNA small subunit methyltransferase G ADFLV_RS08130 PF00925 GTP cyclohydrolase II ADFLV_RS08135 PF00490 Delta-aminolevulinic acid dehydratase ADFLV_RS08140 PF08448 PAS fold ADFLV_RS08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08140 PF08447 PAS fold ADFLV_RS08145 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08145 PF00072 Response regulator receiver domain ADFLV_RS08160 PF02867 Ribonucleotide reductase, barrel domain ADFLV_RS08160 PF00317 Ribonucleotide reductase, all-alpha domain ADFLV_RS08160 PF03477 ATP cone domain ADFLV_RS08165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ADFLV_RS08165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ADFLV_RS08170 PF06969 HemN C-terminal domain ADFLV_RS08170 PF04055 Radical SAM superfamily ADFLV_RS08180 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ADFLV_RS08185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ADFLV_RS08190 PF02540 NAD synthase ADFLV_RS08210 PF00226 DnaJ domain ADFLV_RS08210 PF05099 Tellurite resistance protein TerB ADFLV_RS08215 PF02416 mttA/Hcf106 family ADFLV_RS08220 PF00902 Sec-independent protein translocase protein (TatC) ADFLV_RS08225 PF02547 Queuosine biosynthesis protein ADFLV_RS08245 PF03781 Sulfatase-modifying factor enzyme 1 ADFLV_RS08245 PF12867 DinB superfamily ADFLV_RS08260 PF03737 Aldolase/RraA ADFLV_RS08275 PF01790 Prolipoprotein diacylglyceryl transferase ADFLV_RS08295 PF01367 5'-3' exonuclease, C-terminal SAM fold ADFLV_RS08295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ADFLV_RS08295 PF00476 DNA polymerase family A ADFLV_RS08300 PF02348 Cytidylyltransferase ADFLV_RS08305 PF08495 FIST N domain ADFLV_RS08305 PF00563 EAL domain ADFLV_RS08305 PF10442 FIST C domain ADFLV_RS08305 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08310 PF08448 PAS fold ADFLV_RS08310 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08315 PF12399 Branched-chain amino acid ATP-binding cassette transporter ADFLV_RS08315 PF00005 ABC transporter ADFLV_RS08320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ADFLV_RS08325 PF00591 Glycosyl transferase family, a/b domain ADFLV_RS08325 PF02885 Glycosyl transferase family, helical bundle domain ADFLV_RS08335 PF00764 Arginosuccinate synthase ADFLV_RS08345 PF18030 RimK PreATP-grasp domain ADFLV_RS08345 PF08443 RimK-like ATP-grasp domain ADFLV_RS08360 PF00132 Bacterial transferase hexapeptide (six repeats) ADFLV_RS08365 PF02080 TrkA-C domain ADFLV_RS08365 PF02254 TrkA-N domain ADFLV_RS08370 PF02386 Cation transport protein ADFLV_RS08375 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08375 PF00072 Response regulator receiver domain ADFLV_RS08380 PF13493 Domain of unknown function (DUF4118) ADFLV_RS08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08380 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08380 PF02702 Osmosensitive K+ channel His kinase sensor domain ADFLV_RS08390 PF08447 PAS fold ADFLV_RS08390 PF00989 PAS fold ADFLV_RS08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08390 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08400 PF13662 Toprim domain ADFLV_RS08400 PF02132 RecR protein ADFLV_RS08410 PF00684 DnaJ central domain ADFLV_RS08410 PF01556 DnaJ C terminal domain ADFLV_RS08410 PF00226 DnaJ domain ADFLV_RS08415 PF00291 Pyridoxal-phosphate dependent enzyme ADFLV_RS08435 PF00753 Metallo-beta-lactamase superfamily ADFLV_RS08440 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08440 PF00563 EAL domain ADFLV_RS08440 PF08448 PAS fold ADFLV_RS08440 PF08447 PAS fold ADFLV_RS08445 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08445 PF01590 GAF domain ADFLV_RS08445 PF00360 Phytochrome region ADFLV_RS08445 PF00563 EAL domain ADFLV_RS08450 PF08003 Protein of unknown function (DUF1698) ADFLV_RS08455 PF01578 Cytochrome C assembly protein ADFLV_RS08455 PF05140 ResB-like family ADFLV_RS08460 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08460 PF00072 Response regulator receiver domain ADFLV_RS08465 PF08448 PAS fold ADFLV_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08465 PF08447 PAS fold ADFLV_RS08470 PF01546 Peptidase family M20/M25/M40 ADFLV_RS08470 PF07687 Peptidase dimerisation domain ADFLV_RS08480 PF02203 Tar ligand binding domain homologue ADFLV_RS08480 PF00672 HAMP domain ADFLV_RS08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS08485 PF01653 NAD-dependent DNA ligase adenylation domain ADFLV_RS08485 PF03120 NAD-dependent DNA ligase OB-fold domain ADFLV_RS08485 PF00533 BRCA1 C Terminus (BRCT) domain ADFLV_RS08485 PF12826 Helix-hairpin-helix motif ADFLV_RS08490 PF01627 Hpt domain ADFLV_RS08490 PF00672 HAMP domain ADFLV_RS08490 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ADFLV_RS08490 PF00072 Response regulator receiver domain ADFLV_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08495 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08495 PF00072 Response regulator receiver domain ADFLV_RS08500 PF11849 Domain of unknown function (DUF3369) ADFLV_RS08505 PF03061 Thioesterase superfamily ADFLV_RS08510 PF00005 ABC transporter ADFLV_RS08510 PF12848 ABC transporter ADFLV_RS08520 PF00465 Iron-containing alcohol dehydrogenase ADFLV_RS08525 PF12833 Helix-turn-helix domain ADFLV_RS08525 PF06719 AraC-type transcriptional regulator N-terminus ADFLV_RS08530 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08535 PF00072 Response regulator receiver domain ADFLV_RS08535 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08540 PF01627 Hpt domain ADFLV_RS08540 PF02895 Signal transducing histidine kinase, homodimeric domain ADFLV_RS08540 PF09078 CheY binding ADFLV_RS08540 PF01584 CheW-like domain ADFLV_RS08550 PF13493 Domain of unknown function (DUF4118) ADFLV_RS08550 PF02702 Osmosensitive K+ channel His kinase sensor domain ADFLV_RS08550 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08555 PF08448 PAS fold ADFLV_RS08555 PF08447 PAS fold ADFLV_RS08565 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08570 PF00881 Nitroreductase family ADFLV_RS08580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ADFLV_RS08590 PF02525 Flavodoxin-like fold ADFLV_RS08595 PF01638 HxlR-like helix-turn-helix ADFLV_RS08610 PF03601 Conserved hypothetical protein 698 ADFLV_RS08615 PF03466 LysR substrate binding domain ADFLV_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS08620 PF07694 5TMR of 5TMR-LYT ADFLV_RS08620 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08625 PF01161 Phosphatidylethanolamine-binding protein ADFLV_RS08630 PF12833 Helix-turn-helix domain ADFLV_RS08635 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08650 PF00893 Small Multidrug Resistance protein ADFLV_RS08665 PF08448 PAS fold ADFLV_RS08665 PF08447 PAS fold ADFLV_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08675 PF16925 Tetracyclin repressor-like, C-terminal domain ADFLV_RS08675 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS08685 PF03831 PhnA domain ADFLV_RS08685 PF08274 PhnA Zinc-Ribbon ADFLV_RS08690 PF00107 Zinc-binding dehydrogenase ADFLV_RS08690 PF08240 Alcohol dehydrogenase GroES-like domain ADFLV_RS08695 PF04055 Radical SAM superfamily ADFLV_RS08700 PF10437 Bacterial lipoate protein ligase C-terminus ADFLV_RS08700 PF03099 Biotin/lipoate A/B protein ligase family ADFLV_RS08705 PF17831 Pyruvate dehydrogenase E1 component middle domain ADFLV_RS08705 PF00456 Transketolase, thiamine diphosphate binding domain ADFLV_RS08710 PF00364 Biotin-requiring enzyme ADFLV_RS08710 PF02817 e3 binding domain ADFLV_RS08710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ADFLV_RS08715 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS08715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ADFLV_RS08725 PF00072 Response regulator receiver domain ADFLV_RS08725 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08775 PF00800 Prephenate dehydratase ADFLV_RS08775 PF01817 Chorismate mutase type II ADFLV_RS08780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ADFLV_RS08785 PF00005 ABC transporter ADFLV_RS08790 PF00072 Response regulator receiver domain ADFLV_RS08790 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08790 PF09456 RcsC Alpha-Beta-Loop (ABL) ADFLV_RS08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08795 PF00989 PAS fold ADFLV_RS08795 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS08800 PF01546 Peptidase family M20/M25/M40 ADFLV_RS08800 PF07687 Peptidase dimerisation domain ADFLV_RS08820 PF01713 Smr domain ADFLV_RS08820 PF00488 MutS domain V ADFLV_RS08830 PF00939 Sodium:sulfate symporter transmembrane region ADFLV_RS08835 PF00994 Probable molybdopterin binding domain ADFLV_RS08845 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS08845 PF17862 AAA+ lid domain ADFLV_RS08845 PF06480 FtsH Extracellular ADFLV_RS08845 PF01434 Peptidase family M41 ADFLV_RS08850 PF04055 Radical SAM superfamily ADFLV_RS08850 PF00919 Uncharacterized protein family UPF0004 ADFLV_RS08860 PF01761 3-dehydroquinate synthase ADFLV_RS08880 PF00196 Bacterial regulatory proteins, luxR family ADFLV_RS08880 PF17874 MalT-like TPR region ADFLV_RS08890 PF00005 ABC transporter ADFLV_RS08890 PF03412 Peptidase C39 family ADFLV_RS08890 PF00664 ABC transporter transmembrane region ADFLV_RS08895 PF05736 OprF membrane domain ADFLV_RS08895 PF00691 OmpA family ADFLV_RS08900 PF00072 Response regulator receiver domain ADFLV_RS08900 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08905 PF08447 PAS fold ADFLV_RS08905 PF08448 PAS fold ADFLV_RS08915 PF00270 DEAD/DEAH box helicase ADFLV_RS08915 PF00271 Helicase conserved C-terminal domain ADFLV_RS08925 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS08930 PF00762 Ferrochelatase ADFLV_RS08940 PF04397 LytTr DNA-binding domain ADFLV_RS08940 PF00072 Response regulator receiver domain ADFLV_RS08945 PF07694 5TMR of 5TMR-LYT ADFLV_RS08945 PF06580 Histidine kinase ADFLV_RS08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS08950 PF02146 Sir2 family ADFLV_RS08955 PF01593 Flavin containing amine oxidoreductase ADFLV_RS08970 PF00929 Exonuclease ADFLV_RS08980 PF07196 Flagellin hook IN motif ADFLV_RS08980 PF00669 Bacterial flagellin N-terminal helical region ADFLV_RS08980 PF00700 Bacterial flagellin C-terminal helical region ADFLV_RS08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS09000 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS09000 PF00072 Response regulator receiver domain ADFLV_RS09020 PF00005 ABC transporter ADFLV_RS09020 PF00664 ABC transporter transmembrane region ADFLV_RS09025 PF01594 AI-2E family transporter ADFLV_RS09030 PF00933 Glycosyl hydrolase family 3 N terminal domain ADFLV_RS09030 PF01915 Glycosyl hydrolase family 3 C-terminal domain ADFLV_RS09055 PF02652 L-lactate permease ADFLV_RS09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS09060 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS09070 PF00684 DnaJ central domain ADFLV_RS09070 PF00226 DnaJ domain ADFLV_RS09070 PF01556 DnaJ C terminal domain ADFLV_RS09100 PF00158 Sigma-54 interaction domain ADFLV_RS09100 PF02954 Bacterial regulatory protein, Fis family ADFLV_RS09100 PF00072 Response regulator receiver domain ADFLV_RS09115 PF03641 Possible lysine decarboxylase ADFLV_RS09120 PF00478 IMP dehydrogenase / GMP reductase domain ADFLV_RS09120 PF00571 CBS domain ADFLV_RS09125 PF01425 Amidase ADFLV_RS09130 PF01196 Ribosomal protein L17 ADFLV_RS09135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ADFLV_RS09135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ADFLV_RS09135 PF01000 RNA polymerase Rpb3/RpoA insert domain ADFLV_RS09140 PF01479 S4 domain ADFLV_RS09140 PF00163 Ribosomal protein S4/S9 N-terminal domain ADFLV_RS09145 PF00411 Ribosomal protein S11 ADFLV_RS09150 PF00416 Ribosomal protein S13/S18 ADFLV_RS09155 PF00444 Ribosomal protein L36 ADFLV_RS09170 PF00180 Isocitrate/isopropylmalate dehydrogenase ADFLV_RS09175 PF00589 Phage integrase family ADFLV_RS09210 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ADFLV_RS09245 PF03524 Conjugal transfer protein ADFLV_RS09250 PF03743 Bacterial conjugation TrbI-like protein ADFLV_RS09255 PF00437 Type II/IV secretion system protein ADFLV_RS09260 PF02534 Type IV secretory system Conjugative DNA transfer ADFLV_RS09305 PF01131 DNA topoisomerase ADFLV_RS09305 PF01751 Toprim domain ADFLV_RS09385 PF00694 Aconitase C-terminal domain ADFLV_RS09390 PF04539 Sigma-70 region 3 ADFLV_RS09390 PF04545 Sigma-70, region 4 ADFLV_RS09390 PF04542 Sigma-70 region 2 ADFLV_RS09390 PF00140 Sigma-70 factor, region 1.2 ADFLV_RS09410 PF06865 Pyrimidine/purine nucleoside phosphorylase ADFLV_RS09415 PF00202 Aminotransferase class-III ADFLV_RS09430 PF01098 Cell cycle protein ADFLV_RS09435 PF01479 S4 domain ADFLV_RS09435 PF00849 RNA pseudouridylate synthase ADFLV_RS09440 PF02903 Alpha amylase, N-terminal ig-like domain ADFLV_RS09440 PF00128 Alpha amylase, catalytic domain ADFLV_RS09445 PF02390 Putative methyltransferase ADFLV_RS09450 PF00005 ABC transporter ADFLV_RS09465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ADFLV_RS09475 PF12848 ABC transporter ADFLV_RS09475 PF00005 ABC transporter ADFLV_RS09475 PF16326 ABC transporter C-terminal domain ADFLV_RS09480 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ADFLV_RS09480 PF14602 Hexapeptide repeat of succinyl-transferase ADFLV_RS09485 PF18074 Primosomal protein N C-terminal domain ADFLV_RS09485 PF00271 Helicase conserved C-terminal domain ADFLV_RS09485 PF00270 DEAD/DEAH box helicase ADFLV_RS09485 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ADFLV_RS09510 PF08448 PAS fold ADFLV_RS09510 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS09515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADFLV_RS09520 PF02769 AIR synthase related protein, C-terminal domain ADFLV_RS09520 PF00586 AIR synthase related protein, N-terminal domain ADFLV_RS09535 PF01924 Hydrogenase formation hypA family ADFLV_RS09540 PF01455 HupF/HypC family ADFLV_RS09545 PF02492 CobW/HypB/UreG, nucleotide-binding domain ADFLV_RS09560 PF02203 Tar ligand binding domain homologue ADFLV_RS09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS09560 PF00672 HAMP domain ADFLV_RS09575 PF00893 Small Multidrug Resistance protein ADFLV_RS09585 PF00289 Biotin carboxylase, N-terminal domain ADFLV_RS09585 PF02785 Biotin carboxylase C-terminal domain ADFLV_RS09585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ADFLV_RS09600 PF00005 ABC transporter ADFLV_RS09615 PF05661 Protein of unknown function (DUF808) ADFLV_RS09625 PF12823 Domain of unknown function (DUF3817) ADFLV_RS09645 PF02568 Thiamine biosynthesis protein (ThiI) ADFLV_RS09645 PF02926 THUMP domain ADFLV_RS09660 PF03471 Transporter associated domain ADFLV_RS09660 PF00999 Sodium/hydrogen exchanger family ADFLV_RS09660 PF02080 TrkA-C domain ADFLV_RS09665 PF07556 Protein of unknown function (DUF1538) ADFLV_RS09670 PF00571 CBS domain ADFLV_RS09695 PF00708 Acylphosphatase ADFLV_RS09695 PF01300 Telomere recombination ADFLV_RS09695 PF17788 HypF Kae1-like domain ADFLV_RS09695 PF07503 HypF finger ADFLV_RS09705 PF01867 CRISPR associated protein Cas1 ADFLV_RS09715 PF00270 DEAD/DEAH box helicase ADFLV_RS09715 PF18395 Cas3 C-terminal domain ADFLV_RS09715 PF18019 HD domain ADFLV_RS09750 PF01750 Hydrogenase maturation protease ADFLV_RS09755 PF01292 Prokaryotic cytochrome b561 ADFLV_RS09760 PF00374 Nickel-dependent hydrogenase ADFLV_RS09765 PF10518 TAT (twin-arginine translocation) pathway signal sequence ADFLV_RS09765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ADFLV_RS09765 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ADFLV_RS09775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ADFLV_RS09775 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ADFLV_RS09780 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS09780 PF18665 Tetracyclin repressor-like, C-terminal domain ADFLV_RS09790 PF00330 Aconitase family (aconitate hydratase) ADFLV_RS09790 PF06434 Aconitate hydratase 2 N-terminus ADFLV_RS09790 PF11791 Aconitate B N-terminal domain ADFLV_RS09805 PF01327 Polypeptide deformylase ADFLV_RS09810 PF00501 AMP-binding enzyme ADFLV_RS09815 PF00108 Thiolase, N-terminal domain ADFLV_RS09815 PF02803 Thiolase, C-terminal domain ADFLV_RS09820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ADFLV_RS09820 PF00378 Enoyl-CoA hydratase/isomerase ADFLV_RS09820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ADFLV_RS09825 PF09317 Domain of unknown function (DUF1974) ADFLV_RS09825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ADFLV_RS09825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ADFLV_RS09865 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS09865 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS09865 PF00563 EAL domain ADFLV_RS09885 PF01709 Transcriptional regulator ADFLV_RS09890 PF04333 MlaA lipoprotein ADFLV_RS09905 PF03641 Possible lysine decarboxylase ADFLV_RS09910 PF13419 Haloacid dehalogenase-like hydrolase ADFLV_RS09915 PF08534 Redoxin ADFLV_RS09935 PF02600 Disulfide bond formation protein DsbB ADFLV_RS09950 PF03737 Aldolase/RraA ADFLV_RS09960 PF02028 BCCT, betaine/carnitine/choline family transporter ADFLV_RS09965 PF07690 Major Facilitator Superfamily ADFLV_RS09985 PF00999 Sodium/hydrogen exchanger family ADFLV_RS09985 PF02254 TrkA-N domain ADFLV_RS09995 PF00464 Serine hydroxymethyltransferase ADFLV_RS10000 PF12833 Helix-turn-helix domain ADFLV_RS10000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ADFLV_RS10000 PF02805 Metal binding domain of Ada ADFLV_RS10000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ADFLV_RS10090 PF00464 Serine hydroxymethyltransferase ADFLV_RS10095 PF00202 Aminotransferase class-III ADFLV_RS10100 PF03473 MOSC domain ADFLV_RS10110 PF01263 Aldose 1-epimerase ADFLV_RS10115 PF00905 Penicillin binding protein transpeptidase domain ADFLV_RS10120 PF00271 Helicase conserved C-terminal domain ADFLV_RS10120 PF00270 DEAD/DEAH box helicase ADFLV_RS10150 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ADFLV_RS10150 PF18381 YcaO cyclodehydratase C-terminal domain ADFLV_RS10170 PF00672 HAMP domain ADFLV_RS10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS10170 PF02203 Tar ligand binding domain homologue ADFLV_RS10175 PF00075 RNase H ADFLV_RS10180 PF07836 DmpG-like communication domain ADFLV_RS10180 PF00682 HMGL-like ADFLV_RS10195 PF11799 impB/mucB/samB family C-terminal domain ADFLV_RS10195 PF11798 IMS family HHH motif ADFLV_RS10195 PF00817 impB/mucB/samB family ADFLV_RS10205 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ADFLV_RS10205 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS10205 PF10518 TAT (twin-arginine translocation) pathway signal sequence ADFLV_RS10235 PF00072 Response regulator receiver domain ADFLV_RS10240 PF08447 PAS fold ADFLV_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10240 PF08448 PAS fold ADFLV_RS10245 PF00672 HAMP domain ADFLV_RS10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10245 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS10245 PF00072 Response regulator receiver domain ADFLV_RS10245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ADFLV_RS10245 PF01627 Hpt domain ADFLV_RS10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10275 PF08448 PAS fold ADFLV_RS10275 PF08447 PAS fold ADFLV_RS10285 PF00563 EAL domain ADFLV_RS10285 PF08448 PAS fold ADFLV_RS10285 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS10300 PF01966 HD domain ADFLV_RS10305 PF01243 Pyridoxamine 5'-phosphate oxidase ADFLV_RS10305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ADFLV_RS10320 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS10320 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS10320 PF00563 EAL domain ADFLV_RS10325 PF03880 DbpA RNA binding domain ADFLV_RS10325 PF00270 DEAD/DEAH box helicase ADFLV_RS10325 PF00271 Helicase conserved C-terminal domain ADFLV_RS10340 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS10340 PF10442 FIST C domain ADFLV_RS10340 PF08495 FIST N domain ADFLV_RS10340 PF00563 EAL domain ADFLV_RS10350 PF02626 Carboxyltransferase domain, subdomain A and B ADFLV_RS10360 PF03746 LamB/YcsF family ADFLV_RS10390 PF00005 ABC transporter ADFLV_RS10395 PF13533 Biotin-lipoyl like ADFLV_RS10400 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS10400 PF08361 MAATS-type transcriptional repressor, C-terminal region ADFLV_RS10405 PF01384 Phosphate transporter family ADFLV_RS10415 PF00183 Hsp90 protein ADFLV_RS10420 PF00230 Major intrinsic protein ADFLV_RS10450 PF04403 Paraquat-inducible protein A ADFLV_RS10465 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS10465 PF00563 EAL domain ADFLV_RS10465 PF08448 PAS fold ADFLV_RS10485 PF05088 Bacterial NAD-glutamate dehydrogenase ADFLV_RS10490 PF04073 Aminoacyl-tRNA editing domain ADFLV_RS10495 PF08713 DNA alkylation repair enzyme ADFLV_RS10515 PF00593 TonB dependent receptor ADFLV_RS10515 PF07660 Secretin and TonB N terminus short domain ADFLV_RS10515 PF07715 TonB-dependent Receptor Plug Domain ADFLV_RS10530 PF00491 Arginase family ADFLV_RS10535 PF08502 LeuA allosteric (dimerisation) domain ADFLV_RS10535 PF00682 HMGL-like ADFLV_RS10540 PF12833 Helix-turn-helix domain ADFLV_RS10545 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ADFLV_RS10560 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ADFLV_RS10560 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ADFLV_RS10565 PF01368 DHH family ADFLV_RS10565 PF02833 DHHA2 domain ADFLV_RS10580 PF10415 Fumarase C C-terminus ADFLV_RS10580 PF00206 Lyase ADFLV_RS10585 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS10585 PF00072 Response regulator receiver domain ADFLV_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10590 PF02743 Cache domain ADFLV_RS10590 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS10595 PF01235 Sodium:alanine symporter family ADFLV_RS10600 PF01048 Phosphorylase superfamily ADFLV_RS10605 PF00698 Acyl transferase domain ADFLV_RS10610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ADFLV_RS10620 PF00691 OmpA family ADFLV_RS10620 PF01389 OmpA-like transmembrane domain ADFLV_RS10625 PF00210 Ferritin-like domain ADFLV_RS10630 PF04052 TolB amino-terminal domain ADFLV_RS10640 PF02472 Biopolymer transport protein ExbD/TolR ADFLV_RS10645 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS10650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ADFLV_RS10655 PF02874 ATP synthase alpha/beta family, beta-barrel domain ADFLV_RS10655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ADFLV_RS10660 PF00231 ATP synthase ADFLV_RS10665 PF00306 ATP synthase alpha/beta chain, C terminal domain ADFLV_RS10665 PF02874 ATP synthase alpha/beta family, beta-barrel domain ADFLV_RS10665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ADFLV_RS10670 PF00213 ATP synthase delta (OSCP) subunit ADFLV_RS10675 PF00430 ATP synthase B/B' CF(0) ADFLV_RS10685 PF17762 HTH domain found in ParB protein ADFLV_RS10685 PF02195 ParB-like nuclease domain ADFLV_RS10690 PF13614 AAA domain ADFLV_RS10695 PF08279 HTH domain ADFLV_RS10695 PF03099 Biotin/lipoate A/B protein ligase family ADFLV_RS10695 PF02237 Biotin protein ligase C terminal domain ADFLV_RS10705 PF00551 Formyl transferase ADFLV_RS10705 PF02911 Formyl transferase, C-terminal domain ADFLV_RS10710 PF00696 Amino acid kinase family ADFLV_RS10715 PF01018 GTP1/OBG ADFLV_RS10715 PF01926 50S ribosome-binding GTPase ADFLV_RS10720 PF01016 Ribosomal L27 protein ADFLV_RS10725 PF00829 Ribosomal prokaryotic L21 protein ADFLV_RS10730 PF01042 Endoribonuclease L-PSP ADFLV_RS10735 PF01807 CHC2 zinc finger ADFLV_RS10735 PF16730 DnaG-primase C-terminal, helicase-binding domain ADFLV_RS10735 PF13662 Toprim domain ADFLV_RS10735 PF08275 DNA primase catalytic core, N-terminal domain ADFLV_RS10745 PF00035 Double-stranded RNA binding motif ADFLV_RS10745 PF14622 Ribonuclease-III-like ADFLV_RS10750 PF01264 Chorismate synthase ADFLV_RS10760 PF01435 Peptidase family M48 ADFLV_RS10770 PF00300 Histidine phosphatase superfamily (branch 1) ADFLV_RS10780 PF01926 50S ribosome-binding GTPase ADFLV_RS10780 PF12631 MnmE helical domain ADFLV_RS10780 PF10396 GTP-binding protein TrmE N-terminus ADFLV_RS10790 PF02096 60Kd inner membrane protein ADFLV_RS10790 PF14849 YidC periplasmic domain ADFLV_RS10795 PF01809 Putative membrane protein insertion efficiency factor ADFLV_RS10800 PF00825 Ribonuclease P ADFLV_RS10805 PF00468 Ribosomal protein L34 ADFLV_RS10810 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS10810 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS10810 PF02861 Clp amino terminal domain, pathogenicity island component ADFLV_RS10810 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS10810 PF17871 AAA lid domain ADFLV_RS10815 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS10815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10825 PF01351 Ribonuclease HII ADFLV_RS10840 PF01625 Peptide methionine sulfoxide reductase ADFLV_RS10860 PF00005 ABC transporter ADFLV_RS10885 PF01209 ubiE/COQ5 methyltransferase family ADFLV_RS10895 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS10900 PF02472 Biopolymer transport protein ExbD/TolR ADFLV_RS10905 PF03544 Gram-negative bacterial TonB protein C-terminal ADFLV_RS10910 PF00313 'Cold-shock' DNA-binding domain ADFLV_RS10915 PF01641 SelR domain ADFLV_RS10920 PF00072 Response regulator receiver domain ADFLV_RS10925 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS10925 PF00072 Response regulator receiver domain ADFLV_RS10930 PF09308 LuxQ, periplasmic ADFLV_RS10930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10930 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS10930 PF00072 Response regulator receiver domain ADFLV_RS10935 PF01557 Fumarylacetoacetate (FAA) hydrolase family ADFLV_RS10955 PF00202 Aminotransferase class-III ADFLV_RS10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS10960 PF08447 PAS fold ADFLV_RS10960 PF08448 PAS fold ADFLV_RS10965 PF02142 MGS-like domain ADFLV_RS10965 PF01808 AICARFT/IMPCHase bienzyme ADFLV_RS10970 PF00909 Ammonium Transporter Family ADFLV_RS10975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ADFLV_RS10975 PF00586 AIR synthase related protein, N-terminal domain ADFLV_RS10975 PF02769 AIR synthase related protein, C-terminal domain ADFLV_RS10985 PF01464 Transglycosylase SLT domain ADFLV_RS10985 PF10145 Phage-related minor tail protein ADFLV_RS10985 PF01551 Peptidase family M23 ADFLV_RS10995 PF00583 Acetyltransferase (GNAT) family ADFLV_RS11000 PF00202 Aminotransferase class-III ADFLV_RS11005 PF06339 Ectoine synthase ADFLV_RS11010 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ADFLV_RS11015 PF01227 GTP cyclohydrolase I ADFLV_RS11020 PF01544 CorA-like Mg2+ transporter protein ADFLV_RS11025 PF00482 Type II secretion system (T2SS), protein F ADFLV_RS11030 PF00437 Type II/IV secretion system protein ADFLV_RS11045 PF07650 KH domain ADFLV_RS11045 PF01926 50S ribosome-binding GTPase ADFLV_RS11050 PF01078 Magnesium chelatase, subunit ChlI ADFLV_RS11050 PF13335 Magnesium chelatase, subunit ChlI C-terminal ADFLV_RS11060 PF01327 Polypeptide deformylase ADFLV_RS11065 PF00574 Clp protease ADFLV_RS11070 PF05697 Bacterial trigger factor protein (TF) ADFLV_RS11070 PF05698 Bacterial trigger factor protein (TF) C-terminus ADFLV_RS11070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ADFLV_RS11075 PF00092 von Willebrand factor type A domain ADFLV_RS11080 PF03976 Polyphosphate kinase 2 (PPK2) ADFLV_RS11085 PF03976 Polyphosphate kinase 2 (PPK2) ADFLV_RS11090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ADFLV_RS11095 PF00301 Rubredoxin ADFLV_RS11100 PF03435 Saccharopine dehydrogenase NADP binding domain ADFLV_RS11100 PF16653 Saccharopine dehydrogenase C-terminal domain ADFLV_RS11110 PF02899 Phage integrase, N-terminal SAM-like domain ADFLV_RS11110 PF00589 Phage integrase family ADFLV_RS11195 PF06067 Domain of unknown function (DUF932) ADFLV_RS11310 PF16671 Actin cross-linking domain ADFLV_RS11310 PF04717 Type VI secretion system, phage-baseplate injector ADFLV_RS11350 PF17871 AAA lid domain ADFLV_RS11350 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS11350 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS11350 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS11390 PF04225 Opacity-associated protein A LysM-like domain ADFLV_RS11390 PF01551 Peptidase family M23 ADFLV_RS11400 PF05638 Type VI secretion system effector, Hcp ADFLV_RS11405 PF16671 Actin cross-linking domain ADFLV_RS11405 PF04717 Type VI secretion system, phage-baseplate injector ADFLV_RS11430 PF08402 TOBE domain ADFLV_RS11430 PF00005 ABC transporter ADFLV_RS11435 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS11445 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS11450 PF13416 Bacterial extracellular solute-binding protein ADFLV_RS11470 PF01053 Cys/Met metabolism PLP-dependent enzyme ADFLV_RS11475 PF01053 Cys/Met metabolism PLP-dependent enzyme ADFLV_RS11480 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS11480 PF00072 Response regulator receiver domain ADFLV_RS11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS11485 PF00672 HAMP domain ADFLV_RS11485 PF02203 Tar ligand binding domain homologue ADFLV_RS11490 PF00563 EAL domain ADFLV_RS11490 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS11490 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS11495 PF18698 Histidine kinase sensor domain ADFLV_RS11495 PF00672 HAMP domain ADFLV_RS11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS11495 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS11500 PF00672 HAMP domain ADFLV_RS11500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS11500 PF02203 Tar ligand binding domain homologue ADFLV_RS11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS11505 PF08447 PAS fold ADFLV_RS11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS11515 PF03466 LysR substrate binding domain ADFLV_RS11530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ADFLV_RS11540 PF00072 Response regulator receiver domain ADFLV_RS11540 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS11545 PF00583 Acetyltransferase (GNAT) family ADFLV_RS11550 PF03824 High-affinity nickel-transport protein ADFLV_RS11565 PF06965 Na+/H+ antiporter 1 ADFLV_RS11575 PF02311 AraC-like ligand binding domain ADFLV_RS11575 PF12833 Helix-turn-helix domain ADFLV_RS11580 PF01242 6-pyruvoyl tetrahydropterin synthase ADFLV_RS11595 PF00375 Sodium:dicarboxylate symporter family ADFLV_RS11600 PF00873 AcrB/AcrD/AcrF family ADFLV_RS11615 PF00440 Bacterial regulatory proteins, tetR family ADFLV_RS11620 PF00672 HAMP domain ADFLV_RS11620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS11620 PF02203 Tar ligand binding domain homologue ADFLV_RS11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS11630 PF08447 PAS fold ADFLV_RS11630 PF08448 PAS fold ADFLV_RS11635 PF03150 Di-haem cytochrome c peroxidase ADFLV_RS11640 PF04116 Fatty acid hydroxylase superfamily ADFLV_RS11665 PF00137 ATP synthase subunit C ADFLV_RS11675 PF00924 Mechanosensitive ion channel ADFLV_RS11700 PF00171 Aldehyde dehydrogenase family ADFLV_RS11715 PF12801 4Fe-4S binding domain ADFLV_RS11715 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ADFLV_RS11715 PF13746 4Fe-4S dicluster domain ADFLV_RS11720 PF00989 PAS fold ADFLV_RS11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS11720 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS11720 PF08447 PAS fold ADFLV_RS11725 PF00072 Response regulator receiver domain ADFLV_RS11725 PF12833 Helix-turn-helix domain ADFLV_RS11735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ADFLV_RS11735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ADFLV_RS11735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ADFLV_RS11735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ADFLV_RS11740 PF00795 Carbon-nitrogen hydrolase ADFLV_RS11765 PF00258 Flavodoxin ADFLV_RS11770 PF01475 Ferric uptake regulator family ADFLV_RS11780 PF07664 Ferrous iron transport protein B C terminus ADFLV_RS11780 PF02421 Ferrous iron transport protein B ADFLV_RS11780 PF07670 Nucleoside recognition ADFLV_RS11795 PF04376 Arginine-tRNA-protein transferase, N terminus ADFLV_RS11795 PF04377 Arginine-tRNA-protein transferase, C terminus ADFLV_RS11800 PF00290 Tryptophan synthase alpha chain ADFLV_RS11805 PF00654 Voltage gated chloride channel ADFLV_RS11810 PF02548 Ketopantoate hydroxymethyltransferase ADFLV_RS11815 PF05496 Holliday junction DNA helicase RuvB P-loop domain ADFLV_RS11815 PF05491 RuvB C-terminal winged helix domain ADFLV_RS11815 PF17864 RuvB AAA lid domain ADFLV_RS11820 PF01594 AI-2E family transporter ADFLV_RS11830 PF09905 DNA-binding protein VF530 ADFLV_RS11885 PF04055 Radical SAM superfamily ADFLV_RS11890 PF01208 Uroporphyrinogen decarboxylase (URO-D) ADFLV_RS11900 PF02774 Semialdehyde dehydrogenase, dimerisation domain ADFLV_RS11900 PF01118 Semialdehyde dehydrogenase, NAD binding domain ADFLV_RS11905 PF00521 DNA gyrase/topoisomerase IV, subunit A ADFLV_RS11905 PF03989 DNA gyrase C-terminal domain, beta-propeller ADFLV_RS11915 PF01960 ArgJ family ADFLV_RS11925 PF00830 Ribosomal L28 family ADFLV_RS11940 PF01370 NAD dependent epimerase/dehydratase family ADFLV_RS11945 PF00294 pfkB family carbohydrate kinase ADFLV_RS11945 PF01467 Cytidylyltransferase-like ADFLV_RS11950 PF13580 SIS domain ADFLV_RS11955 PF04393 Protein of unknown function (DUF535) ADFLV_RS11970 PF16363 GDP-mannose 4,6 dehydratase ADFLV_RS11975 PF04321 RmlD substrate binding domain ADFLV_RS11985 PF03062 MBOAT, membrane-bound O-acyltransferase family ADFLV_RS11990 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ADFLV_RS11995 PF00483 Nucleotidyl transferase ADFLV_RS12020 PF00534 Glycosyl transferases group 1 ADFLV_RS12020 PF13439 Glycosyltransferase Family 4 ADFLV_RS12025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ADFLV_RS12025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ADFLV_RS12025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ADFLV_RS12045 PF00037 4Fe-4S binding domain ADFLV_RS12055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ADFLV_RS12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS12060 PF01493 GXGXG motif ADFLV_RS12060 PF01645 Conserved region in glutamate synthase ADFLV_RS12060 PF04898 Glutamate synthase central domain ADFLV_RS12060 PF00310 Glutamine amidotransferases class-II ADFLV_RS12065 PF03480 Bacterial extracellular solute-binding protein, family 7 ADFLV_RS12070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ADFLV_RS12075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ADFLV_RS12085 PF08448 PAS fold ADFLV_RS12085 PF08447 PAS fold ADFLV_RS12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS12090 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS12090 PF00072 Response regulator receiver domain ADFLV_RS12120 PF08447 PAS fold ADFLV_RS12120 PF08448 PAS fold ADFLV_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS12160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ADFLV_RS12165 PF01029 NusB family ADFLV_RS12170 PF00885 6,7-dimethyl-8-ribityllumazine synthase ADFLV_RS12175 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS12180 PF00793 DAHP synthetase I family ADFLV_RS12205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ADFLV_RS12225 PF16226 Domain of unknown function (DUF4885) ADFLV_RS12250 PF00437 Type II/IV secretion system protein ADFLV_RS12255 PF03958 Bacterial type II/III secretion system short domain ADFLV_RS12255 PF00263 Bacterial type II and III secretion system protein ADFLV_RS12285 PF00482 Type II secretion system (T2SS), protein F ADFLV_RS12295 PF08334 Type II secretion system (T2SS), protein G ADFLV_RS12295 PF07963 Prokaryotic N-terminal methylation motif ADFLV_RS12310 PF01205 Uncharacterized protein family UPF0029 ADFLV_RS12310 PF09186 Domain of unknown function (DUF1949) ADFLV_RS12315 PF01479 S4 domain ADFLV_RS12315 PF01728 FtsJ-like methyltransferase ADFLV_RS12320 PF06574 FAD synthetase ADFLV_RS12320 PF01687 Riboflavin kinase ADFLV_RS12325 PF13649 Methyltransferase domain ADFLV_RS12330 PF00578 AhpC/TSA family ADFLV_RS12340 PF02913 FAD linked oxidases, C-terminal domain ADFLV_RS12340 PF01565 FAD binding domain ADFLV_RS12345 PF03631 Virulence factor BrkB ADFLV_RS12350 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS12350 PF00360 Phytochrome region ADFLV_RS12350 PF01590 GAF domain ADFLV_RS12350 PF00563 EAL domain ADFLV_RS12390 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS12390 PF17871 AAA lid domain ADFLV_RS12390 PF02861 Clp amino terminal domain, pathogenicity island component ADFLV_RS12390 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS12390 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS12395 PF02617 ATP-dependent Clp protease adaptor protein ClpS ADFLV_RS12410 PF00501 AMP-binding enzyme ADFLV_RS12410 PF13193 AMP-binding enzyme C-terminal domain ADFLV_RS12415 PF01575 MaoC like domain ADFLV_RS12435 PF00672 HAMP domain ADFLV_RS12435 PF02203 Tar ligand binding domain homologue ADFLV_RS12435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS12440 PF01741 Large-conductance mechanosensitive channel, MscL ADFLV_RS12445 PF01613 Flavin reductase like domain ADFLV_RS12475 PF00771 FHIPEP family ADFLV_RS12480 PF00700 Bacterial flagellin C-terminal helical region ADFLV_RS12480 PF00669 Bacterial flagellin N-terminal helical region ADFLV_RS12485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ADFLV_RS12485 PF18269 T3SS EscN ATPase C-terminal domain ADFLV_RS12495 PF01312 FlhB HrpN YscU SpaS Family ADFLV_RS12510 PF00460 Flagella basal body rod protein ADFLV_RS12510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ADFLV_RS12515 PF02049 Flagellar hook-basal body complex protein FliE ADFLV_RS12525 PF10609 NUBPL iron-transfer P-loop NTPase ADFLV_RS12530 PF00448 SRP54-type protein, GTPase domain ADFLV_RS12555 PF01618 MotA/TolQ/ExbB proton channel family ADFLV_RS12560 PF16973 Flagellar motor switch protein FliN N-terminal ADFLV_RS12560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ADFLV_RS12580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ADFLV_RS12580 PF00460 Flagella basal body rod protein ADFLV_RS12580 PF07196 Flagellin hook IN motif ADFLV_RS12580 PF07559 Flagellar basal body protein FlaE ADFLV_RS12585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ADFLV_RS12585 PF07559 Flagellar basal body protein FlaE ADFLV_RS12585 PF00460 Flagella basal body rod protein ADFLV_RS12585 PF07196 Flagellin hook IN motif ADFLV_RS12595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ADFLV_RS12605 PF14841 FliG middle domain ADFLV_RS12605 PF01706 FliG C-terminal domain ADFLV_RS12605 PF14842 FliG N-terminal domain ADFLV_RS12610 PF08345 Flagellar M-ring protein C-terminal ADFLV_RS12610 PF01514 Secretory protein of YscJ/FliF family ADFLV_RS12615 PF00460 Flagella basal body rod protein ADFLV_RS12620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ADFLV_RS12620 PF00460 Flagella basal body rod protein ADFLV_RS12630 PF00072 Response regulator receiver domain ADFLV_RS12635 PF00460 Flagella basal body rod protein ADFLV_RS12635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ADFLV_RS12650 PF01782 RimM N-terminal domain ADFLV_RS12660 PF00886 Ribosomal protein S16 ADFLV_RS12665 PF02881 SRP54-type protein, helical bundle domain ADFLV_RS12665 PF02978 Signal peptide binding domain ADFLV_RS12665 PF00448 SRP54-type protein, GTPase domain ADFLV_RS12670 PF00849 RNA pseudouridylate synthase ADFLV_RS12675 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ADFLV_RS12685 PF01784 NIF3 (NGG1p interacting factor 3) ADFLV_RS12690 PF02091 Glycyl-tRNA synthetase alpha subunit ADFLV_RS12700 PF00731 AIR carboxylase ADFLV_RS12715 PF00672 HAMP domain ADFLV_RS12715 PF17200 Single Cache domain 2 ADFLV_RS12715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS12715 PF00672 HAMP domain ADFLV_RS12715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS12715 PF17200 Single Cache domain 2 ADFLV_RS12720 PF13476 AAA domain ADFLV_RS12725 PF01513 ATP-NAD kinase ADFLV_RS12730 PF00009 Elongation factor Tu GTP binding domain ADFLV_RS12730 PF00679 Elongation factor G C-terminus ADFLV_RS12730 PF14492 Elongation Factor G, domain II ADFLV_RS12730 PF03764 Elongation factor G, domain IV ADFLV_RS12730 PF03144 Elongation factor Tu domain 2 ADFLV_RS12735 PF00177 Ribosomal protein S7p/S5e ADFLV_RS12740 PF00164 Ribosomal protein S12/S23 ADFLV_RS12745 PF07690 Major Facilitator Superfamily ADFLV_RS12755 PF02203 Tar ligand binding domain homologue ADFLV_RS12755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS12755 PF00672 HAMP domain ADFLV_RS12765 PF00005 ABC transporter ADFLV_RS12780 PF01891 Cobalt uptake substrate-specific transmembrane region ADFLV_RS12780 PF13190 PDGLE domain ADFLV_RS12800 PF00800 Prephenate dehydratase ADFLV_RS12800 PF01817 Chorismate mutase type II ADFLV_RS12800 PF01842 ACT domain ADFLV_RS12815 PF00561 alpha/beta hydrolase fold ADFLV_RS12820 PF01361 Tautomerase enzyme ADFLV_RS12830 PF00682 HMGL-like ADFLV_RS12830 PF07836 DmpG-like communication domain ADFLV_RS12835 PF01118 Semialdehyde dehydrogenase, NAD binding domain ADFLV_RS12835 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ADFLV_RS12845 PF00171 Aldehyde dehydrogenase family ADFLV_RS12850 PF03928 Haem-degrading ADFLV_RS12855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ADFLV_RS12860 PF00175 Oxidoreductase NAD-binding domain ADFLV_RS12860 PF00970 Oxidoreductase FAD-binding domain ADFLV_RS12860 PF00111 2Fe-2S iron-sulfur cluster binding domain ADFLV_RS12865 PF00056 lactate/malate dehydrogenase, NAD binding domain ADFLV_RS12865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ADFLV_RS12870 PF12282 Signal transduction histidine kinase ADFLV_RS12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS12870 PF07568 Histidine kinase ADFLV_RS12875 PF00072 Response regulator receiver domain ADFLV_RS12890 PF01925 Sulfite exporter TauE/SafE ADFLV_RS12895 PF00970 Oxidoreductase FAD-binding domain ADFLV_RS12895 PF00111 2Fe-2S iron-sulfur cluster binding domain ADFLV_RS12895 PF00175 Oxidoreductase NAD-binding domain ADFLV_RS12905 PF02332 Methane/Phenol/Toluene Hydroxylase ADFLV_RS12905 PF04945 YHS domain ADFLV_RS12910 PF02406 MmoB/DmpM family ADFLV_RS12915 PF02332 Methane/Phenol/Toluene Hydroxylase ADFLV_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS12925 PF12282 Signal transduction histidine kinase ADFLV_RS12925 PF07568 Histidine kinase ADFLV_RS12930 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS12930 PF00072 Response regulator receiver domain ADFLV_RS12935 PF02203 Tar ligand binding domain homologue ADFLV_RS12935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS12935 PF00672 HAMP domain ADFLV_RS12940 PF00106 short chain dehydrogenase ADFLV_RS12945 PF00180 Isocitrate/isopropylmalate dehydrogenase ADFLV_RS12960 PF04998 RNA polymerase Rpb1, domain 5 ADFLV_RS12960 PF05000 RNA polymerase Rpb1, domain 4 ADFLV_RS12960 PF04983 RNA polymerase Rpb1, domain 3 ADFLV_RS12960 PF00623 RNA polymerase Rpb1, domain 2 ADFLV_RS12960 PF04997 RNA polymerase Rpb1, domain 1 ADFLV_RS12965 PF04565 RNA polymerase Rpb2, domain 3 ADFLV_RS12965 PF10385 RNA polymerase beta subunit external 1 domain ADFLV_RS12965 PF00562 RNA polymerase Rpb2, domain 6 ADFLV_RS12965 PF04560 RNA polymerase Rpb2, domain 7 ADFLV_RS12965 PF04563 RNA polymerase beta subunit ADFLV_RS12965 PF04561 RNA polymerase Rpb2, domain 2 ADFLV_RS12970 PF16320 Ribosomal protein L7/L12 dimerisation domain ADFLV_RS12970 PF00542 Ribosomal protein L7/L12 C-terminal domain ADFLV_RS12975 PF00466 Ribosomal protein L10 ADFLV_RS12980 PF00687 Ribosomal protein L1p/L10e family ADFLV_RS12985 PF03946 Ribosomal protein L11, N-terminal domain ADFLV_RS12985 PF00298 Ribosomal protein L11, RNA binding domain ADFLV_RS12990 PF02357 Transcription termination factor nusG ADFLV_RS13005 PF00471 Ribosomal protein L33 ADFLV_RS13010 PF03143 Elongation factor Tu C-terminal domain ADFLV_RS13010 PF03144 Elongation factor Tu domain 2 ADFLV_RS13010 PF00009 Elongation factor Tu GTP binding domain ADFLV_RS13035 PF08245 Mur ligase middle domain ADFLV_RS13040 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ADFLV_RS13040 PF00953 Glycosyl transferase family 4 ADFLV_RS13045 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ADFLV_RS13045 PF01676 Metalloenzyme superfamily ADFLV_RS13050 PF00005 ABC transporter ADFLV_RS13050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ADFLV_RS13055 PF00912 Transglycosylase ADFLV_RS13055 PF00905 Penicillin binding protein transpeptidase domain ADFLV_RS13060 PF00120 Glutamine synthetase, catalytic domain ADFLV_RS13060 PF03951 Glutamine synthetase, beta-Grasp domain ADFLV_RS13070 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS13070 PF00072 Response regulator receiver domain ADFLV_RS13075 PF02391 MoaE protein ADFLV_RS13085 PF02621 Menaquinone biosynthesis ADFLV_RS13090 PF02673 Bacitracin resistance protein BacA ADFLV_RS13095 PF03033 Glycosyltransferase family 28 N-terminal domain ADFLV_RS13095 PF04101 Glycosyltransferase family 28 C-terminal domain ADFLV_RS13100 PF01098 Cell cycle protein ADFLV_RS13110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ADFLV_RS13150 PF00117 Glutamine amidotransferase class-I ADFLV_RS13155 PF13416 Bacterial extracellular solute-binding protein ADFLV_RS13160 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS13165 PF00005 ABC transporter ADFLV_RS13170 PF03707 Bacterial signalling protein N terminal repeat ADFLV_RS13170 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS13170 PF00563 EAL domain ADFLV_RS13175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ADFLV_RS13175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ADFLV_RS13205 PF09371 Tex-like protein N-terminal domain ADFLV_RS13205 PF00575 S1 RNA binding domain ADFLV_RS13205 PF16921 Tex protein YqgF-like domain ADFLV_RS13205 PF17674 HHH domain ADFLV_RS13220 PF01042 Endoribonuclease L-PSP ADFLV_RS13225 PF13344 Haloacid dehalogenase-like hydrolase ADFLV_RS13225 PF00293 NUDIX domain ADFLV_RS13235 PF01914 MarC family integral membrane protein ADFLV_RS13240 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS13245 PF00497 Bacterial extracellular solute-binding proteins, family 3 ADFLV_RS13250 PF00005 ABC transporter ADFLV_RS13265 PF00155 Aminotransferase class I and II ADFLV_RS13285 PF01245 Ribosomal protein L19 ADFLV_RS13290 PF01746 tRNA (Guanine-1)-methyltransferase ADFLV_RS13300 PF01717 Cobalamin-independent synthase, Catalytic domain ADFLV_RS13300 PF08267 Cobalamin-independent synthase, N-terminal domain ADFLV_RS13305 PF00291 Pyridoxal-phosphate dependent enzyme ADFLV_RS13305 PF13291 ACT domain ADFLV_RS13310 PF00119 ATP synthase A chain ADFLV_RS13320 PF13361 UvrD-like helicase C-terminal domain ADFLV_RS13320 PF00580 UvrD/REP helicase N-terminal domain ADFLV_RS13325 PF00696 Amino acid kinase family ADFLV_RS13330 PF00291 Pyridoxal-phosphate dependent enzyme ADFLV_RS13335 PF00355 Rieske [2Fe-2S] domain ADFLV_RS13335 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ADFLV_RS13340 PF00032 Cytochrome b(C-terminal)/b6/petD ADFLV_RS13340 PF00033 Cytochrome b/b6/petB ADFLV_RS13355 PF04452 RNA methyltransferase ADFLV_RS13365 PF00994 Probable molybdopterin binding domain ADFLV_RS13365 PF03454 MoeA C-terminal region (domain IV) ADFLV_RS13365 PF03453 MoeA N-terminal region (domain I and II) ADFLV_RS13370 PF06508 Queuosine biosynthesis protein QueC ADFLV_RS13390 PF00550 Phosphopantetheine attachment site ADFLV_RS13395 PF02801 Beta-ketoacyl synthase, C-terminal domain ADFLV_RS13395 PF00109 Beta-ketoacyl synthase, N-terminal domain ADFLV_RS13400 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ADFLV_RS13405 PF01230 HIT domain ADFLV_RS13410 PF01409 tRNA synthetases class II core domain (F) ADFLV_RS13410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ADFLV_RS13415 PF03147 Ferredoxin-fold anticodon binding domain ADFLV_RS13415 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ADFLV_RS13415 PF03484 tRNA synthetase B5 domain ADFLV_RS13415 PF01588 Putative tRNA binding domain ADFLV_RS13420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ADFLV_RS13425 PF02401 LytB protein ADFLV_RS13430 PF00575 S1 RNA binding domain ADFLV_RS13435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ADFLV_RS13435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADFLV_RS13435 PF01842 ACT domain ADFLV_RS13440 PF08207 Elongation factor P (EF-P) KOW-like domain ADFLV_RS13440 PF09285 Elongation factor P, C-terminal ADFLV_RS13440 PF01132 Elongation factor P (EF-P) OB domain ADFLV_RS13445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ADFLV_RS13445 PF01872 RibD C-terminal domain ADFLV_RS13450 PF02576 RimP N-terminal domain ADFLV_RS13455 PF02033 Ribosome-binding factor A ADFLV_RS13460 PF00009 Elongation factor Tu GTP binding domain ADFLV_RS13460 PF11987 Translation-initiation factor 2 ADFLV_RS13460 PF04760 Translation initiation factor IF-2, N-terminal region ADFLV_RS13470 PF08544 GHMP kinases C terminal ADFLV_RS13470 PF00288 GHMP kinases N terminal domain ADFLV_RS13480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ADFLV_RS13485 PF01476 LysM domain ADFLV_RS13485 PF01551 Peptidase family M23 ADFLV_RS13495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ADFLV_RS13495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ADFLV_RS13500 PF02445 Quinolinate synthetase A protein ADFLV_RS13505 PF02660 Glycerol-3-phosphate acyltransferase ADFLV_RS13515 PF05538 Campylobacter major outer membrane protein ADFLV_RS13525 PF00472 RF-1 domain ADFLV_RS13525 PF03462 PCRF domain ADFLV_RS13530 PF13533 Biotin-lipoyl like ADFLV_RS13535 PF07869 Protein of unknown function (DUF1656) ADFLV_RS13540 PF04632 Fusaric acid resistance protein family ADFLV_RS13545 PF02321 Outer membrane efflux protein ADFLV_RS13550 PF01047 MarR family ADFLV_RS13575 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ADFLV_RS13575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ADFLV_RS13590 PF00115 Cytochrome C and Quinol oxidase polypeptide I ADFLV_RS13595 PF01668 SmpB protein ADFLV_RS13600 PF00288 GHMP kinases N terminal domain ADFLV_RS13605 PF01509 TruB family pseudouridylate synthase (N terminal domain) ADFLV_RS13610 PF00580 UvrD/REP helicase N-terminal domain ADFLV_RS13610 PF13361 UvrD-like helicase C-terminal domain ADFLV_RS13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ADFLV_RS13615 PF03466 LysR substrate binding domain ADFLV_RS13620 PF04055 Radical SAM superfamily ADFLV_RS13620 PF16199 Radical_SAM C-terminal domain ADFLV_RS13625 PF00156 Phosphoribosyl transferase domain ADFLV_RS13625 PF13537 Glutamine amidotransferase domain ADFLV_RS13630 PF05173 Dihydrodipicolinate reductase, C-terminus ADFLV_RS13630 PF01113 Dihydrodipicolinate reductase, N-terminus ADFLV_RS13635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS13640 PF00085 Thioredoxin ADFLV_RS13645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ADFLV_RS13645 PF01411 tRNA synthetases class II (A) ADFLV_RS13645 PF02272 DHHA1 domain ADFLV_RS13675 PF00877 NlpC/P60 family ADFLV_RS13680 PF00877 NlpC/P60 family ADFLV_RS13695 PF00892 EamA-like transporter family ADFLV_RS13705 PF02545 Maf-like protein ADFLV_RS13710 PF00034 Cytochrome c ADFLV_RS13710 PF03150 Di-haem cytochrome c peroxidase ADFLV_RS13715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ADFLV_RS13715 PF02779 Transketolase, pyrimidine binding domain ADFLV_RS13715 PF02780 Transketolase, C-terminal domain ADFLV_RS13720 PF00155 Aminotransferase class I and II ADFLV_RS13725 PF00800 Prephenate dehydratase ADFLV_RS13725 PF01817 Chorismate mutase type II ADFLV_RS13725 PF01842 ACT domain ADFLV_RS13730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ADFLV_RS13730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ADFLV_RS13740 PF00121 Triosephosphate isomerase ADFLV_RS13745 PF00162 Phosphoglycerate kinase ADFLV_RS13750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ADFLV_RS13750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ADFLV_RS13755 PF01467 Cytidylyltransferase-like ADFLV_RS13765 PF03485 Arginyl tRNA synthetase N terminal domain ADFLV_RS13765 PF00750 tRNA synthetases class I (R) ADFLV_RS13765 PF05746 DALR anticodon binding domain ADFLV_RS13770 PF02416 mttA/Hcf106 family ADFLV_RS13775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ADFLV_RS13780 PF01553 Acyltransferase ADFLV_RS13795 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ADFLV_RS13800 PF01259 SAICAR synthetase ADFLV_RS13805 PF13180 PDZ domain ADFLV_RS13805 PF03572 Peptidase family S41 ADFLV_RS13820 PF01142 tRNA pseudouridine synthase D (TruD) ADFLV_RS13825 PF01258 Prokaryotic dksA/traR C4-type zinc finger ADFLV_RS13850 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS13850 PF00989 PAS fold ADFLV_RS13850 PF08447 PAS fold ADFLV_RS13855 PF00563 EAL domain ADFLV_RS13900 PF02899 Phage integrase, N-terminal SAM-like domain ADFLV_RS13900 PF00589 Phage integrase family ADFLV_RS13915 PF00920 Dehydratase family ADFLV_RS13920 PF13180 PDZ domain ADFLV_RS13920 PF17820 PDZ domain ADFLV_RS13925 PF00072 Response regulator receiver domain ADFLV_RS13925 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS13940 PF03186 CobD/Cbib protein ADFLV_RS13945 PF11066 Protein of unknown function (DUF2867) ADFLV_RS13945 PF13460 NAD(P)H-binding ADFLV_RS13950 PF07685 CobB/CobQ-like glutamine amidotransferase domain ADFLV_RS13950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ADFLV_RS13970 PF00155 Aminotransferase class I and II ADFLV_RS13975 PF02654 Cobalamin-5-phosphate synthase ADFLV_RS13985 PF01914 MarC family integral membrane protein ADFLV_RS13990 PF02348 Cytidylyltransferase ADFLV_RS13990 PF13472 GDSL-like Lipase/Acylhydrolase family ADFLV_RS14000 PF00939 Sodium:sulfate symporter transmembrane region ADFLV_RS14010 PF11412 Disulphide bond corrector protein DsbC ADFLV_RS14010 PF02683 Cytochrome C biogenesis protein transmembrane region ADFLV_RS14015 PF00085 Thioredoxin ADFLV_RS14025 PF18030 RimK PreATP-grasp domain ADFLV_RS14025 PF08443 RimK-like ATP-grasp domain ADFLV_RS14040 PF00563 EAL domain ADFLV_RS14040 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS14040 PF10442 FIST C domain ADFLV_RS14040 PF08495 FIST N domain ADFLV_RS14045 PF02666 Phosphatidylserine decarboxylase ADFLV_RS14055 PF06725 3D domain ADFLV_RS14055 PF03562 MltA specific insert domain ADFLV_RS14065 PF00012 Hsp70 protein ADFLV_RS14070 PF01025 GrpE ADFLV_RS14080 PF16868 NMT1-like family ADFLV_RS14090 PF00196 Bacterial regulatory proteins, luxR family ADFLV_RS14090 PF00072 Response regulator receiver domain ADFLV_RS14095 PF08447 PAS fold ADFLV_RS14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS14095 PF08448 PAS fold ADFLV_RS14100 PF01416 tRNA pseudouridine synthase ADFLV_RS14110 PF01478 Type IV leader peptidase family ADFLV_RS14110 PF06750 Bacterial Peptidase A24 N-terminal domain ADFLV_RS14115 PF01255 Putative undecaprenyl diphosphate synthase ADFLV_RS14120 PF04127 DNA / pantothenate metabolism flavoprotein ADFLV_RS14120 PF02441 Flavoprotein ADFLV_RS14125 PF14602 Hexapeptide repeat of succinyl-transferase ADFLV_RS14125 PF12804 MobA-like NTP transferase domain ADFLV_RS14140 PF05958 tRNA (Uracil-5-)-methyltransferase ADFLV_RS14150 PF00669 Bacterial flagellin N-terminal helical region ADFLV_RS14150 PF00700 Bacterial flagellin C-terminal helical region ADFLV_RS14160 PF04101 Glycosyltransferase family 28 C-terminal domain ADFLV_RS14165 PF08666 SAF domain ADFLV_RS14165 PF03102 NeuB family ADFLV_RS14170 PF00753 Metallo-beta-lactamase superfamily ADFLV_RS14185 PF13193 AMP-binding enzyme C-terminal domain ADFLV_RS14185 PF00501 AMP-binding enzyme ADFLV_RS14200 PF00501 AMP-binding enzyme ADFLV_RS14200 PF13193 AMP-binding enzyme C-terminal domain ADFLV_RS14200 PF00668 Condensation domain ADFLV_RS14200 PF07993 Male sterility protein ADFLV_RS14200 PF00550 Phosphopantetheine attachment site ADFLV_RS14240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ADFLV_RS14240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ADFLV_RS14255 PF02348 Cytidylyltransferase ADFLV_RS14260 PF13749 Putative ATP-dependent DNA helicase recG C-terminal ADFLV_RS14260 PF17191 RecG wedge domain ADFLV_RS14260 PF00270 DEAD/DEAH box helicase ADFLV_RS14265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ADFLV_RS14270 PF02719 Polysaccharide biosynthesis protein ADFLV_RS14280 PF00154 recA bacterial DNA recombination protein ADFLV_RS14285 PF03952 Enolase, N-terminal domain ADFLV_RS14285 PF00113 Enolase, C-terminal TIM barrel domain ADFLV_RS14300 PF02254 TrkA-N domain ADFLV_RS14300 PF02080 TrkA-C domain ADFLV_RS14300 PF00999 Sodium/hydrogen exchanger family ADFLV_RS14305 PF06968 Biotin and Thiamin Synthesis associated domain ADFLV_RS14305 PF04055 Radical SAM superfamily ADFLV_RS14315 PF01751 Toprim domain ADFLV_RS14315 PF13368 Topoisomerase C-terminal repeat ADFLV_RS14315 PF01131 DNA topoisomerase ADFLV_RS14320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ADFLV_RS14325 PF02621 Menaquinone biosynthesis ADFLV_RS14335 PF00361 Proton-conducting membrane transporter ADFLV_RS14340 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ADFLV_RS14340 PF00361 Proton-conducting membrane transporter ADFLV_RS14345 PF00361 Proton-conducting membrane transporter ADFLV_RS14345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ADFLV_RS14350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ADFLV_RS14355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ADFLV_RS14360 PF12838 4Fe-4S dicluster domain ADFLV_RS14365 PF00146 NADH dehydrogenase ADFLV_RS14370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ADFLV_RS14370 PF00384 Molybdopterin oxidoreductase ADFLV_RS14370 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ADFLV_RS14385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ADFLV_RS14390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ADFLV_RS14395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ADFLV_RS14400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ADFLV_RS14405 PF00004 ATPase family associated with various cellular activities (AAA) ADFLV_RS14405 PF17758 Proteasomal ATPase OB N-terminal domain ADFLV_RS14405 PF16450 Proteasomal ATPase OB C-terminal domain ADFLV_RS14435 PF00916 Sulfate permease family ADFLV_RS14435 PF01740 STAS domain ADFLV_RS14445 PF01261 Xylose isomerase-like TIM barrel ADFLV_RS14450 PF07992 Pyridine nucleotide-disulphide oxidoreductase ADFLV_RS14455 PF00209 Sodium:neurotransmitter symporter family ADFLV_RS14465 PF02677 Epoxyqueuosine reductase QueH ADFLV_RS14470 PF02684 Lipid-A-disaccharide synthetase ADFLV_RS14475 PF07977 FabA-like domain ADFLV_RS14480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ADFLV_RS14480 PF00132 Bacterial transferase hexapeptide (six repeats) ADFLV_RS14485 PF07724 AAA domain (Cdc48 subfamily) ADFLV_RS14485 PF10431 C-terminal, D2-small domain, of ClpB protein ADFLV_RS14485 PF06689 ClpX C4-type zinc finger ADFLV_RS14500 PF00677 Lumazine binding domain ADFLV_RS14505 PF13932 GidA associated domain ADFLV_RS14505 PF01134 Glucose inhibited division protein A ADFLV_RS14520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ADFLV_RS14520 PF13746 4Fe-4S dicluster domain ADFLV_RS14520 PF12801 4Fe-4S binding domain ADFLV_RS14525 PF06418 CTP synthase N-terminus ADFLV_RS14525 PF00117 Glutamine amidotransferase class-I ADFLV_RS14530 PF17768 RecJ OB domain ADFLV_RS14530 PF02272 DHHA1 domain ADFLV_RS14530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ADFLV_RS14530 PF01368 DHH family ADFLV_RS14545 PF01965 DJ-1/PfpI family ADFLV_RS14560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ADFLV_RS14560 PF07733 Bacterial DNA polymerase III alpha NTPase domain ADFLV_RS14560 PF02811 PHP domain ADFLV_RS14560 PF14579 Helix-hairpin-helix motif ADFLV_RS14565 PF01975 Survival protein SurE ADFLV_RS14580 PF01967 MoaC family ADFLV_RS14585 PF01165 Ribosomal protein S21 ADFLV_RS14615 PF01027 Inhibitor of apoptosis-promoting Bax1 ADFLV_RS14620 PF02581 Thiamine monophosphate synthase ADFLV_RS14620 PF17792 ThiD2 family ADFLV_RS14630 PF03840 Preprotein translocase SecG subunit ADFLV_RS14640 PF01765 Ribosome recycling factor ADFLV_RS14645 PF00156 Phosphoribosyl transferase domain ADFLV_RS14655 PF12832 MFS_1 like family ADFLV_RS14660 PF12795 Mechanosensitive ion channel porin domain ADFLV_RS14660 PF12794 Mechanosensitive ion channel inner membrane domain 1 ADFLV_RS14660 PF00924 Mechanosensitive ion channel ADFLV_RS14665 PF01544 CorA-like Mg2+ transporter protein ADFLV_RS14670 PF03883 Peroxide stress protein YaaA ADFLV_RS14675 PF02810 SEC-C motif ADFLV_RS14695 PF13545 Crp-like helix-turn-helix domain ADFLV_RS14695 PF00027 Cyclic nucleotide-binding domain ADFLV_RS14705 PF03167 Uracil DNA glycosylase superfamily ADFLV_RS14710 PF00171 Aldehyde dehydrogenase family ADFLV_RS14715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ADFLV_RS14715 PF00205 Thiamine pyrophosphate enzyme, central domain ADFLV_RS14715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ADFLV_RS14720 PF04011 LemA family ADFLV_RS14735 PF13419 Haloacid dehalogenase-like hydrolase ADFLV_RS14755 PF07690 Major Facilitator Superfamily ADFLV_RS14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS14765 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS14765 PF08447 PAS fold ADFLV_RS14765 PF00989 PAS fold ADFLV_RS14770 PF00072 Response regulator receiver domain ADFLV_RS14770 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ADFLV_RS14785 PF00672 HAMP domain ADFLV_RS14785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ADFLV_RS14785 PF00512 His Kinase A (phospho-acceptor) domain ADFLV_RS14785 PF01627 Hpt domain ADFLV_RS14785 PF00072 Response regulator receiver domain ADFLV_RS14790 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS14790 PF17158 Membrane-associated sensor, integral membrane domain ADFLV_RS14800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS14800 PF00672 HAMP domain ADFLV_RS14800 PF02203 Tar ligand binding domain homologue ADFLV_RS14805 PF11849 Domain of unknown function (DUF3369) ADFLV_RS14820 PF00072 Response regulator receiver domain ADFLV_RS14820 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS14825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ADFLV_RS14825 PF00529 HlyD membrane-fusion protein of T1SS ADFLV_RS14830 PF00873 AcrB/AcrD/AcrF family ADFLV_RS14835 PF02321 Outer membrane efflux protein ADFLV_RS14850 PF13411 MerR HTH family regulatory protein ADFLV_RS14850 PF00145 C-5 cytosine-specific DNA methylase ADFLV_RS14870 PF00149 Calcineurin-like phosphoesterase ADFLV_RS14880 PF01053 Cys/Met metabolism PLP-dependent enzyme ADFLV_RS14885 PF02082 Transcriptional regulator ADFLV_RS14890 PF00291 Pyridoxal-phosphate dependent enzyme ADFLV_RS14900 PF01507 Phosphoadenosine phosphosulfate reductase family ADFLV_RS14905 PF01507 Phosphoadenosine phosphosulfate reductase family ADFLV_RS14910 PF00009 Elongation factor Tu GTP binding domain ADFLV_RS14915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ADFLV_RS14915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ADFLV_RS14920 PF02347 Glycine cleavage system P-protein ADFLV_RS14925 PF00149 Calcineurin-like phosphoesterase ADFLV_RS14930 PF00011 Hsp20/alpha crystallin family ADFLV_RS14940 PF14403 Circularly permuted ATP-grasp type 2 ADFLV_RS14940 PF04168 A predicted alpha-helical domain with a conserved ER motif. ADFLV_RS14945 PF01841 Transglutaminase-like superfamily ADFLV_RS14945 PF08379 Bacterial transglutaminase-like N-terminal region ADFLV_RS14950 PF00672 HAMP domain ADFLV_RS14950 PF02203 Tar ligand binding domain homologue ADFLV_RS14950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ADFLV_RS14955 PF12857 TOBE-like domain ADFLV_RS14955 PF17850 CysA C-terminal regulatory domain ADFLV_RS14955 PF00005 ABC transporter ADFLV_RS14960 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component ADFLV_RS14970 PF00563 EAL domain ADFLV_RS14970 PF00990 Diguanylate cyclase, GGDEF domain ADFLV_RS14970 PF08495 FIST N domain ADFLV_RS14970 PF10442 FIST C domain ADFLV_RS14980 PF02082 Transcriptional regulator ADFLV_RS15000 PF14403 Circularly permuted ATP-grasp type 2 ADFLV_RS15010 PF08019 Phosphoethanolamine transferase EptA/EptB ADFLV_RS15010 PF00884 Sulfatase ADFLV_RS15020 PF01219 Prokaryotic diacylglycerol kinase ADFLV_RS15025 PF09086 Domain of unknown function (DUF1924) ADFLV_RS15050 PF00486 Transcriptional regulatory protein, C terminal ADFLV_RS15050 PF00072 Response regulator receiver domain ADFLV_RS15060 PF08241 Methyltransferase domain ADFLV_RS15070 PF11849 Domain of unknown function (DUF3369) ADFLV_RS15075 PF02511 Thymidylate synthase complementing protein ADFLV_RS15080 PF04960 Glutaminase ADFLV_RS15085 PF03458 UPF0126 domain ADFLV_RS15095 PF02911 Formyl transferase, C-terminal domain ADFLV_RS15095 PF00551 Formyl transferase ADFLV_RS15100 PF02075 Crossover junction endodeoxyribonuclease RuvC