locus-tag class description AHALO_RS00005 PF00308 Bacterial dnaA protein AHALO_RS00005 PF11638 DnaA N-terminal domain AHALO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AHALO_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AHALO_RS00010 PF02767 DNA polymerase III beta subunit, central domain AHALO_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AHALO_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00015 PF01751 Toprim domain AHALO_RS00015 PF00204 DNA gyrase B AHALO_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus AHALO_RS00035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AHALO_RS00050 PF14489 QueF-like protein AHALO_RS00075 PF08448 PAS fold AHALO_RS00075 PF08447 PAS fold AHALO_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00080 PF00849 RNA pseudouridylate synthase AHALO_RS00085 PF10397 Adenylosuccinate lyase C-terminus AHALO_RS00085 PF00206 Lyase AHALO_RS00090 PF02867 Ribonucleotide reductase, barrel domain AHALO_RS00090 PF03477 ATP cone domain AHALO_RS00090 PF00317 Ribonucleotide reductase, all-alpha domain AHALO_RS00095 PF00268 Ribonucleotide reductase, small chain AHALO_RS00105 PF00881 Nitroreductase family AHALO_RS00110 PF00989 PAS fold AHALO_RS00110 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00115 PF03063 Prismane/CO dehydrogenase family AHALO_RS00120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AHALO_RS00120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS00135 PF01451 Low molecular weight phosphotyrosine protein phosphatase AHALO_RS00145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHALO_RS00145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHALO_RS00145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHALO_RS00145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHALO_RS00150 PF01810 LysE type translocator AHALO_RS00155 PF03150 Di-haem cytochrome c peroxidase AHALO_RS00155 PF00034 Cytochrome c AHALO_RS00160 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00165 PF00072 Response regulator receiver domain AHALO_RS00165 PF12833 Helix-turn-helix domain AHALO_RS00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00170 PF08447 PAS fold AHALO_RS00170 PF08448 PAS fold AHALO_RS00175 PF02580 D-Tyr-tRNA(Tyr) deacylase AHALO_RS00180 PF02805 Metal binding domain of Ada AHALO_RS00180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AHALO_RS00180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AHALO_RS00180 PF12833 Helix-turn-helix domain AHALO_RS00185 PF00464 Serine hydroxymethyltransferase AHALO_RS00190 PF12801 4Fe-4S binding domain AHALO_RS00190 PF13746 4Fe-4S dicluster domain AHALO_RS00190 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AHALO_RS00195 PF00171 Aldehyde dehydrogenase family AHALO_RS00200 PF00085 Thioredoxin AHALO_RS00205 PF01638 HxlR-like helix-turn-helix AHALO_RS00210 PF08240 Alcohol dehydrogenase GroES-like domain AHALO_RS00210 PF00107 Zinc-binding dehydrogenase AHALO_RS00215 PF01638 HxlR-like helix-turn-helix AHALO_RS00220 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHALO_RS00225 PF04055 Radical SAM superfamily AHALO_RS00240 PF00977 Histidine biosynthesis protein AHALO_RS00245 PF00398 Ribosomal RNA adenine dimethylase AHALO_RS00250 PF17770 Ribonuclease J C-terminal domain AHALO_RS00250 PF00753 Metallo-beta-lactamase superfamily AHALO_RS00250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AHALO_RS00255 PF01380 SIS domain AHALO_RS00255 PF00571 CBS domain AHALO_RS00260 PF01479 S4 domain AHALO_RS00260 PF00849 RNA pseudouridylate synthase AHALO_RS00265 PF12002 MgsA AAA+ ATPase C terminal AHALO_RS00265 PF01661 Macro domain AHALO_RS00265 PF16193 AAA C-terminal domain AHALO_RS00265 PF05496 Holliday junction DNA helicase RuvB P-loop domain AHALO_RS00270 PF03653 Uncharacterised protein family (UPF0093) AHALO_RS00275 PF02562 PhoH-like protein AHALO_RS00275 PF13638 PIN domain AHALO_RS00280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AHALO_RS00280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AHALO_RS00290 PF00672 HAMP domain AHALO_RS00290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS00290 PF02203 Tar ligand binding domain homologue AHALO_RS00295 PF03480 Bacterial extracellular solute-binding protein, family 7 AHALO_RS00300 PF00881 Nitroreductase family AHALO_RS00310 PF00733 Asparagine synthase AHALO_RS00310 PF13537 Glutamine amidotransferase domain AHALO_RS00320 PF00072 Response regulator receiver domain AHALO_RS00320 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00325 PF01384 Phosphate transporter family AHALO_RS00335 PF00271 Helicase conserved C-terminal domain AHALO_RS00335 PF00270 DEAD/DEAH box helicase AHALO_RS00340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHALO_RS00340 PF02785 Biotin carboxylase C-terminal domain AHALO_RS00340 PF00289 Biotin carboxylase, N-terminal domain AHALO_RS00345 PF00364 Biotin-requiring enzyme AHALO_RS00350 PF14437 MafB19-like deaminase AHALO_RS00360 PF02754 Cysteine-rich domain AHALO_RS00365 PF13183 4Fe-4S dicluster domain AHALO_RS00365 PF02589 LUD domain AHALO_RS00365 PF11870 Domain of unknown function (DUF3390) AHALO_RS00370 PF02589 LUD domain AHALO_RS00375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00375 PF00989 PAS fold AHALO_RS00375 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00380 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00380 PF00072 Response regulator receiver domain AHALO_RS00385 PF03480 Bacterial extracellular solute-binding protein, family 7 AHALO_RS00395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AHALO_RS00405 PF00639 PPIC-type PPIASE domain AHALO_RS00405 PF09312 SurA N-terminal domain AHALO_RS00410 PF02637 GatB domain AHALO_RS00410 PF02934 GatB/GatE catalytic domain AHALO_RS00415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AHALO_RS00415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AHALO_RS00420 PF08448 PAS fold AHALO_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00420 PF08447 PAS fold AHALO_RS00425 PF00072 Response regulator receiver domain AHALO_RS00425 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00435 PF01568 Molydopterin dinucleotide binding domain AHALO_RS00435 PF18364 Molybdopterin oxidoreductase N-terminal domain AHALO_RS00435 PF00384 Molybdopterin oxidoreductase AHALO_RS00440 PF03649 Uncharacterised protein family (UPF0014) AHALO_RS00445 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00445 PF00072 Response regulator receiver domain AHALO_RS00455 PF00873 AcrB/AcrD/AcrF family AHALO_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00480 PF00072 Response regulator receiver domain AHALO_RS00480 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00485 PF04264 YceI-like domain AHALO_RS00495 PF05114 Protein of unknown function (DUF692) AHALO_RS00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00505 PF00989 PAS fold AHALO_RS00505 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00510 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00510 PF00072 Response regulator receiver domain AHALO_RS00525 PF01554 MatE AHALO_RS00530 PF01842 ACT domain AHALO_RS00530 PF00742 Homoserine dehydrogenase AHALO_RS00530 PF03447 Homoserine dehydrogenase, NAD binding domain AHALO_RS00535 PF00155 Aminotransferase class I and II AHALO_RS00545 PF08032 RNA 2'-O ribose methyltransferase substrate binding AHALO_RS00545 PF00588 SpoU rRNA Methylase family AHALO_RS00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS00550 PF00672 HAMP domain AHALO_RS00550 PF12729 Four helix bundle sensory module for signal transduction AHALO_RS00555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AHALO_RS00560 PF01197 Ribosomal protein L31 AHALO_RS00580 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS00620 PF14449 Pre-toxin TG AHALO_RS00620 PF04740 LXG domain of WXG superfamily AHALO_RS00630 PF01769 Divalent cation transporter AHALO_RS00630 PF00571 CBS domain AHALO_RS00630 PF03448 MgtE intracellular N domain AHALO_RS00635 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS00640 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS00640 PF07694 5TMR of 5TMR-LYT AHALO_RS00645 PF08448 PAS fold AHALO_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00645 PF08447 PAS fold AHALO_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS00660 PF10417 C-terminal domain of 1-Cys peroxiredoxin AHALO_RS00660 PF00578 AhpC/TSA family AHALO_RS00670 PF08447 PAS fold AHALO_RS00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00670 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00670 PF00989 PAS fold AHALO_RS00680 PF05231 MASE1 AHALO_RS00680 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS00680 PF00563 EAL domain AHALO_RS00680 PF13426 PAS domain AHALO_RS00680 PF08447 PAS fold AHALO_RS00680 PF08448 PAS fold AHALO_RS00685 PF02222 ATP-grasp domain AHALO_RS00690 PF01678 Diaminopimelate epimerase AHALO_RS00695 PF01121 Dephospho-CoA kinase AHALO_RS00700 PF17284 Spermidine synthase tetramerisation domain AHALO_RS00705 PF02769 AIR synthase related protein, C-terminal domain AHALO_RS00705 PF00586 AIR synthase related protein, N-terminal domain AHALO_RS00715 PF04264 YceI-like domain AHALO_RS00720 PF01047 MarR family AHALO_RS00725 PF01810 LysE type translocator AHALO_RS00735 PF00266 Aminotransferase class-V AHALO_RS00740 PF13393 Histidyl-tRNA synthetase AHALO_RS00745 PF00709 Adenylosuccinate synthetase AHALO_RS00755 PF00117 Glutamine amidotransferase class-I AHALO_RS00755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AHALO_RS00770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AHALO_RS00770 PF02542 YgbB family AHALO_RS00780 PF01964 Radical SAM ThiC family AHALO_RS00785 PF01883 Iron-sulfur cluster assembly protein AHALO_RS00785 PF10609 NUBPL iron-transfer P-loop NTPase AHALO_RS00795 PF01502 Phosphoribosyl-AMP cyclohydrolase AHALO_RS00795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AHALO_RS00805 PF01063 Amino-transferase class IV AHALO_RS00815 PF02607 B12 binding domain AHALO_RS00815 PF02574 Homocysteine S-methyltransferase AHALO_RS00815 PF00809 Pterin binding enzyme AHALO_RS00815 PF02310 B12 binding domain AHALO_RS00815 PF02965 Vitamin B12 dependent methionine synthase, activation domain AHALO_RS00855 PF02664 S-Ribosylhomocysteinase (LuxS) AHALO_RS00860 PF10371 Domain of unknown function AHALO_RS00860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AHALO_RS00860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AHALO_RS00860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AHALO_RS00860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHALO_RS00865 PF13419 Haloacid dehalogenase-like hydrolase AHALO_RS00870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AHALO_RS00885 PF13247 4Fe-4S dicluster domain AHALO_RS00885 PF12800 4Fe-4S binding domain AHALO_RS00890 PF00384 Molybdopterin oxidoreductase AHALO_RS00890 PF01568 Molydopterin dinucleotide binding domain AHALO_RS00890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS00900 PF12833 Helix-turn-helix domain AHALO_RS00905 PF00380 Ribosomal protein S9/S16 AHALO_RS00910 PF00572 Ribosomal protein L13 AHALO_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS00915 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS00915 PF00672 HAMP domain AHALO_RS00920 PF00072 Response regulator receiver domain AHALO_RS00920 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS00930 PF01895 PhoU domain AHALO_RS00935 PF00005 ABC transporter AHALO_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS00950 PF00563 EAL domain AHALO_RS00950 PF01590 GAF domain AHALO_RS00950 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS00950 PF00989 PAS fold AHALO_RS00960 PF00472 RF-1 domain AHALO_RS00960 PF03462 PCRF domain AHALO_RS00965 PF01649 Ribosomal protein S20 AHALO_RS00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHALO_RS00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHALO_RS00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHALO_RS00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHALO_RS00975 PF01252 Signal peptidase (SPase) II AHALO_RS00980 PF00330 Aconitase family (aconitate hydratase) AHALO_RS00985 PF12804 MobA-like NTP transferase domain AHALO_RS00995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AHALO_RS01005 PF10518 TAT (twin-arginine translocation) pathway signal sequence AHALO_RS01005 PF01568 Molydopterin dinucleotide binding domain AHALO_RS01005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS01005 PF00384 Molybdopterin oxidoreductase AHALO_RS01010 PF13247 4Fe-4S dicluster domain AHALO_RS01030 PF00453 Ribosomal protein L20 AHALO_RS01035 PF01632 Ribosomal protein L35 AHALO_RS01040 PF05198 Translation initiation factor IF-3, N-terminal domain AHALO_RS01040 PF00707 Translation initiation factor IF-3, C-terminal domain AHALO_RS01045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AHALO_RS01045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHALO_RS01045 PF03129 Anticodon binding domain AHALO_RS01070 PF05818 Enterobacterial TraT complement resistance protein AHALO_RS01080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AHALO_RS01080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AHALO_RS01080 PF13288 DXP reductoisomerase C-terminal domain AHALO_RS01100 PF00814 Glycoprotease family AHALO_RS01105 PF01253 Translation initiation factor SUI1 AHALO_RS01110 PF01235 Sodium:alanine symporter family AHALO_RS01115 PF03853 YjeF-related protein N-terminus AHALO_RS01115 PF01256 Carbohydrate kinase AHALO_RS01125 PF05690 Thiazole biosynthesis protein ThiG AHALO_RS01195 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS01195 PF00072 Response regulator receiver domain AHALO_RS01200 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS01200 PF01590 GAF domain AHALO_RS01200 PF00360 Phytochrome region AHALO_RS01200 PF00563 EAL domain AHALO_RS01210 PF01142 tRNA pseudouridine synthase D (TruD) AHALO_RS01225 PF09383 NIL domain AHALO_RS01225 PF00005 ABC transporter AHALO_RS01230 PF02405 Permease MlaE AHALO_RS01235 PF15437 Plasminogen-binding protein pgbA C-terminal AHALO_RS01245 PF13180 PDZ domain AHALO_RS01245 PF03572 Peptidase family S41 AHALO_RS01250 PF01259 SAICAR synthetase AHALO_RS01255 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AHALO_RS01270 PF01553 Acyltransferase AHALO_RS01275 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AHALO_RS01285 PF02416 mttA/Hcf106 family AHALO_RS01290 PF03485 Arginyl tRNA synthetase N terminal domain AHALO_RS01290 PF05746 DALR anticodon binding domain AHALO_RS01290 PF00750 tRNA synthetases class I (R) AHALO_RS01295 PF01467 Cytidylyltransferase-like AHALO_RS01300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AHALO_RS01300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHALO_RS01305 PF00162 Phosphoglycerate kinase AHALO_RS01310 PF00121 Triosephosphate isomerase AHALO_RS01320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AHALO_RS01320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AHALO_RS01325 PF13344 Haloacid dehalogenase-like hydrolase AHALO_RS01330 PF00800 Prephenate dehydratase AHALO_RS01330 PF01817 Chorismate mutase type II AHALO_RS01330 PF01842 ACT domain AHALO_RS01335 PF00155 Aminotransferase class I and II AHALO_RS01340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AHALO_RS01340 PF02780 Transketolase, C-terminal domain AHALO_RS01340 PF02779 Transketolase, pyrimidine binding domain AHALO_RS01345 PF02028 BCCT, betaine/carnitine/choline family transporter AHALO_RS01355 PF02545 Maf-like protein AHALO_RS01380 PF00877 NlpC/P60 family AHALO_RS01390 PF01411 tRNA synthetases class II (A) AHALO_RS01390 PF02272 DHHA1 domain AHALO_RS01390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AHALO_RS01395 PF00085 Thioredoxin AHALO_RS01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS01400 PF00989 PAS fold AHALO_RS01400 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS01405 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS01405 PF00072 Response regulator receiver domain AHALO_RS01410 PF01235 Sodium:alanine symporter family AHALO_RS01415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS01420 PF01113 Dihydrodipicolinate reductase, N-terminus AHALO_RS01420 PF05173 Dihydrodipicolinate reductase, C-terminus AHALO_RS01425 PF00156 Phosphoribosyl transferase domain AHALO_RS01430 PF04055 Radical SAM superfamily AHALO_RS01430 PF16199 Radical_SAM C-terminal domain AHALO_RS01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS01435 PF03466 LysR substrate binding domain AHALO_RS01440 PF13361 UvrD-like helicase C-terminal domain AHALO_RS01440 PF00580 UvrD/REP helicase N-terminal domain AHALO_RS01445 PF01509 TruB family pseudouridylate synthase (N terminal domain) AHALO_RS01450 PF00288 GHMP kinases N terminal domain AHALO_RS01455 PF01668 SmpB protein AHALO_RS01460 PF00115 Cytochrome C and Quinol oxidase polypeptide I AHALO_RS01495 PF12705 PD-(D/E)XK nuclease superfamily AHALO_RS01500 PF03222 Tryptophan/tyrosine permease family AHALO_RS01505 PF05538 Campylobacter major outer membrane protein AHALO_RS01510 PF03462 PCRF domain AHALO_RS01510 PF00472 RF-1 domain AHALO_RS01520 PF05538 Campylobacter major outer membrane protein AHALO_RS01530 PF02660 Glycerol-3-phosphate acyltransferase AHALO_RS01535 PF02445 Quinolinate synthetase A protein AHALO_RS01540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AHALO_RS01540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AHALO_RS01545 PF02272 DHHA1 domain AHALO_RS01545 PF01368 DHH family AHALO_RS01555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AHALO_RS01565 PF00288 GHMP kinases N terminal domain AHALO_RS01565 PF08544 GHMP kinases C terminal AHALO_RS01575 PF00009 Elongation factor Tu GTP binding domain AHALO_RS01575 PF11987 Translation-initiation factor 2 AHALO_RS01575 PF04760 Translation initiation factor IF-2, N-terminal region AHALO_RS01580 PF02033 Ribosome-binding factor A AHALO_RS01585 PF02576 RimP N-terminal domain AHALO_RS01590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AHALO_RS01590 PF01872 RibD C-terminal domain AHALO_RS01595 PF08207 Elongation factor P (EF-P) KOW-like domain AHALO_RS01595 PF09285 Elongation factor P, C-terminal AHALO_RS01595 PF01132 Elongation factor P (EF-P) OB domain AHALO_RS01600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AHALO_RS01600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AHALO_RS01600 PF01842 ACT domain AHALO_RS01605 PF00575 S1 RNA binding domain AHALO_RS01610 PF02401 LytB protein AHALO_RS01615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AHALO_RS01620 PF03484 tRNA synthetase B5 domain AHALO_RS01620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AHALO_RS01620 PF03147 Ferredoxin-fold anticodon binding domain AHALO_RS01620 PF01588 Putative tRNA binding domain AHALO_RS01625 PF01409 tRNA synthetases class II core domain (F) AHALO_RS01625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AHALO_RS01630 PF01230 HIT domain AHALO_RS01635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AHALO_RS01640 PF02801 Beta-ketoacyl synthase, C-terminal domain AHALO_RS01640 PF00109 Beta-ketoacyl synthase, N-terminal domain AHALO_RS01645 PF00550 Phosphopantetheine attachment site AHALO_RS01675 PF06508 Queuosine biosynthesis protein QueC AHALO_RS01680 PF03454 MoeA C-terminal region (domain IV) AHALO_RS01680 PF00994 Probable molybdopterin binding domain AHALO_RS01680 PF03453 MoeA N-terminal region (domain I and II) AHALO_RS01705 PF00032 Cytochrome b(C-terminal)/b6/petD AHALO_RS01705 PF00033 Cytochrome b/b6/petB AHALO_RS01715 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS01720 PF00696 Amino acid kinase family AHALO_RS01725 PF17158 Membrane-associated sensor, integral membrane domain AHALO_RS01725 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS01730 PF00580 UvrD/REP helicase N-terminal domain AHALO_RS01730 PF12705 PD-(D/E)XK nuclease superfamily AHALO_RS01730 PF13361 UvrD-like helicase C-terminal domain AHALO_RS01735 PF02203 Tar ligand binding domain homologue AHALO_RS01735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS01735 PF00672 HAMP domain AHALO_RS01740 PF02581 Thiamine monophosphate synthase AHALO_RS01750 PF02203 Tar ligand binding domain homologue AHALO_RS01750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS01750 PF00672 HAMP domain AHALO_RS01755 PF00119 ATP synthase A chain AHALO_RS01760 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS01760 PF13291 ACT domain AHALO_RS01765 PF01746 tRNA (Guanine-1)-methyltransferase AHALO_RS01770 PF01245 Ribosomal protein L19 AHALO_RS01790 PF00106 short chain dehydrogenase AHALO_RS01795 PF12821 Threonine/Serine exporter, ThrE AHALO_RS01800 PF06738 Putative threonine/serine exporter AHALO_RS01815 PF01590 GAF domain AHALO_RS01815 PF00563 EAL domain AHALO_RS01815 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS01815 PF00360 Phytochrome region AHALO_RS01825 PF03309 Type III pantothenate kinase AHALO_RS01830 PF01634 ATP phosphoribosyltransferase AHALO_RS01835 PF08241 Methyltransferase domain AHALO_RS01845 PF00579 tRNA synthetases class I (W and Y) AHALO_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHALO_RS01870 PF02659 Putative manganese efflux pump AHALO_RS01875 PF07690 Major Facilitator Superfamily AHALO_RS01880 PF07690 Major Facilitator Superfamily AHALO_RS01885 PF00664 ABC transporter transmembrane region AHALO_RS01885 PF00005 ABC transporter AHALO_RS01890 PF00005 ABC transporter AHALO_RS01890 PF00664 ABC transporter transmembrane region AHALO_RS01895 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS01895 PF00593 TonB dependent receptor AHALO_RS01905 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS01905 PF00593 TonB dependent receptor AHALO_RS01915 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS01915 PF00593 TonB dependent receptor AHALO_RS01920 PF00072 Response regulator receiver domain AHALO_RS01925 PF07568 Histidine kinase AHALO_RS01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS01925 PF12282 Signal transduction histidine kinase AHALO_RS01940 PF02472 Biopolymer transport protein ExbD/TolR AHALO_RS01945 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS01950 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS01975 PF00593 TonB dependent receptor AHALO_RS01975 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS01985 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS01985 PF00593 TonB dependent receptor AHALO_RS01990 PF12833 Helix-turn-helix domain AHALO_RS02005 PF00072 Response regulator receiver domain AHALO_RS02005 PF12833 Helix-turn-helix domain AHALO_RS02010 PF08448 PAS fold AHALO_RS02010 PF08447 PAS fold AHALO_RS02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02020 PF04542 Sigma-70 region 2 AHALO_RS02020 PF04545 Sigma-70, region 4 AHALO_RS02025 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS02025 PF00593 TonB dependent receptor AHALO_RS02030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AHALO_RS02030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AHALO_RS02035 PF12833 Helix-turn-helix domain AHALO_RS02055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHALO_RS02055 PF02403 Seryl-tRNA synthetase N-terminal domain AHALO_RS02060 PF05140 ResB-like family AHALO_RS02060 PF01578 Cytochrome C assembly protein AHALO_RS02065 PF02335 Cytochrome c552 AHALO_RS02070 PF03264 NapC/NirT cytochrome c family, N-terminal region AHALO_RS02080 PF08447 PAS fold AHALO_RS02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS02100 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AHALO_RS02105 PF12801 4Fe-4S binding domain AHALO_RS02105 PF00037 4Fe-4S binding domain AHALO_RS02110 PF12800 4Fe-4S binding domain AHALO_RS02110 PF12838 4Fe-4S dicluster domain AHALO_RS02115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS02115 PF10518 TAT (twin-arginine translocation) pathway signal sequence AHALO_RS02115 PF01568 Molydopterin dinucleotide binding domain AHALO_RS02115 PF00384 Molybdopterin oxidoreductase AHALO_RS02120 PF10414 Sirohaem synthase dimerisation region AHALO_RS02120 PF14824 Sirohaem biosynthesis protein central AHALO_RS02120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AHALO_RS02135 PF02885 Glycosyl transferase family, helical bundle domain AHALO_RS02135 PF00591 Glycosyl transferase family, a/b domain AHALO_RS02145 PF04055 Radical SAM superfamily AHALO_RS02145 PF06463 Molybdenum Cofactor Synthesis C AHALO_RS02155 PF00312 Ribosomal protein S15 AHALO_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02175 PF08448 PAS fold AHALO_RS02175 PF08447 PAS fold AHALO_RS02180 PF13380 CoA binding domain AHALO_RS02185 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS02185 PF08521 Two-component sensor kinase N-terminal AHALO_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02190 PF00072 Response regulator receiver domain AHALO_RS02190 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS02195 PF00639 PPIC-type PPIASE domain AHALO_RS02200 PF01116 Fructose-bisphosphate aldolase class-II AHALO_RS02205 PF02472 Biopolymer transport protein ExbD/TolR AHALO_RS02210 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS02220 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02225 PF01202 Shikimate kinase AHALO_RS02230 PF00815 Histidinol dehydrogenase AHALO_RS02240 PF00348 Polyprenyl synthetase AHALO_RS02245 PF01488 Shikimate / quinate 5-dehydrogenase AHALO_RS02245 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AHALO_RS02245 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AHALO_RS02250 PF04073 Aminoacyl-tRNA editing domain AHALO_RS02250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHALO_RS02250 PF03129 Anticodon binding domain AHALO_RS02255 PF05552 Conserved TM helix AHALO_RS02255 PF00924 Mechanosensitive ion channel AHALO_RS02260 PF01743 Poly A polymerase head domain AHALO_RS02260 PF12627 Probable RNA and SrmB- binding site of polymerase A AHALO_RS02260 PF01966 HD domain AHALO_RS02270 PF02699 Preprotein translocase subunit AHALO_RS02275 PF02355 Protein export membrane protein AHALO_RS02280 PF02355 Protein export membrane protein AHALO_RS02280 PF07549 SecD/SecF GG Motif AHALO_RS02285 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS02300 PF00133 tRNA synthetases class I (I, L, M and V) AHALO_RS02300 PF09334 tRNA synthetases class I (M) AHALO_RS02300 PF13603 Leucyl-tRNA synthetase, Domain 2 AHALO_RS02310 PF08245 Mur ligase middle domain AHALO_RS02315 PF01551 Peptidase family M23 AHALO_RS02315 PF04225 Opacity-associated protein A LysM-like domain AHALO_RS02330 PF02254 TrkA-N domain AHALO_RS02330 PF00999 Sodium/hydrogen exchanger family AHALO_RS02345 PF02687 FtsX-like permease family AHALO_RS02345 PF00005 ABC transporter AHALO_RS02345 PF12704 MacB-like periplasmic core domain AHALO_RS02350 PF00005 ABC transporter AHALO_RS02350 PF02687 FtsX-like permease family AHALO_RS02350 PF12704 MacB-like periplasmic core domain AHALO_RS02375 PF00072 Response regulator receiver domain AHALO_RS02380 PF07568 Histidine kinase AHALO_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02380 PF12282 Signal transduction histidine kinase AHALO_RS02400 PF02559 CarD-like/TRCF domain AHALO_RS02400 PF03461 TRCF domain AHALO_RS02400 PF00271 Helicase conserved C-terminal domain AHALO_RS02400 PF00270 DEAD/DEAH box helicase AHALO_RS02400 PF17757 UvrB interaction domain AHALO_RS02405 PF00221 Aromatic amino acid lyase AHALO_RS02420 PF00890 FAD binding domain AHALO_RS02420 PF04205 FMN-binding domain AHALO_RS02425 PF00989 PAS fold AHALO_RS02425 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02430 PF00072 Response regulator receiver domain AHALO_RS02430 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS02440 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS02440 PF00072 Response regulator receiver domain AHALO_RS02455 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS02455 PF00072 Response regulator receiver domain AHALO_RS02470 PF00672 HAMP domain AHALO_RS02470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS02470 PF02743 Cache domain AHALO_RS02475 PF00072 Response regulator receiver domain AHALO_RS02480 PF08447 PAS fold AHALO_RS02480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02485 PF00989 PAS fold AHALO_RS02485 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS02490 PF02028 BCCT, betaine/carnitine/choline family transporter AHALO_RS02495 PF13277 YmdB-like protein AHALO_RS02515 PF01209 ubiE/COQ5 methyltransferase family AHALO_RS02520 PF13742 OB-fold nucleic acid binding domain AHALO_RS02520 PF02601 Exonuclease VII, large subunit AHALO_RS02525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS02525 PF00672 HAMP domain AHALO_RS02525 PF02203 Tar ligand binding domain homologue AHALO_RS02530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS02530 PF08447 PAS fold AHALO_RS02535 PF01584 CheW-like domain AHALO_RS02540 PF00072 Response regulator receiver domain AHALO_RS02545 PF00072 Response regulator receiver domain AHALO_RS02550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AHALO_RS02560 PF02261 Aspartate decarboxylase AHALO_RS02565 PF02575 YbaB/EbfC DNA-binding family AHALO_RS02570 PF00348 Polyprenyl synthetase AHALO_RS02575 PF00166 Chaperonin 10 Kd subunit AHALO_RS02580 PF00118 TCP-1/cpn60 chaperonin family AHALO_RS02600 PF00893 Small Multidrug Resistance protein AHALO_RS02615 PF00459 Inositol monophosphatase family AHALO_RS02620 PF01380 SIS domain AHALO_RS02625 PF02773 S-adenosylmethionine synthetase, C-terminal domain AHALO_RS02625 PF02772 S-adenosylmethionine synthetase, central domain AHALO_RS02625 PF00438 S-adenosylmethionine synthetase, N-terminal domain AHALO_RS02630 PF01039 Carboxyl transferase domain AHALO_RS02630 PF17848 Acetyl-coA carboxylase zinc finger domain AHALO_RS02635 PF02581 Thiamine monophosphate synthase AHALO_RS02640 PF02590 Predicted SPOUT methyltransferase AHALO_RS02655 PF01207 Dihydrouridine synthase (Dus) AHALO_RS02665 PF01434 Peptidase family M41 AHALO_RS02665 PF17862 AAA+ lid domain AHALO_RS02665 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS02675 PF11849 Domain of unknown function (DUF3369) AHALO_RS02680 PF00072 Response regulator receiver domain AHALO_RS02685 PF08448 PAS fold AHALO_RS02685 PF08447 PAS fold AHALO_RS02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02690 PF17151 Periplasmic sensor domain AHALO_RS02690 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS02695 PF00682 HMGL-like AHALO_RS02695 PF08502 LeuA allosteric (dimerisation) domain AHALO_RS02700 PF02254 TrkA-N domain AHALO_RS02700 PF00999 Sodium/hydrogen exchanger family AHALO_RS02705 PF07556 Protein of unknown function (DUF1538) AHALO_RS02720 PF00488 MutS domain V AHALO_RS02720 PF05190 MutS family domain IV AHALO_RS02720 PF05192 MutS domain III AHALO_RS02720 PF05188 MutS domain II AHALO_RS02720 PF01624 MutS domain I AHALO_RS02730 PF00440 Bacterial regulatory proteins, tetR family AHALO_RS02740 PF00977 Histidine biosynthesis protein AHALO_RS02745 PF01370 NAD dependent epimerase/dehydratase family AHALO_RS02745 PF08338 Domain of unknown function (DUF1731) AHALO_RS02750 PF00117 Glutamine amidotransferase class-I AHALO_RS02765 PF03144 Elongation factor Tu domain 2 AHALO_RS02765 PF00009 Elongation factor Tu GTP binding domain AHALO_RS02765 PF00679 Elongation factor G C-terminus AHALO_RS02765 PF06421 GTP-binding protein LepA C-terminus AHALO_RS02770 PF05736 OprF membrane domain AHALO_RS02770 PF00691 OmpA family AHALO_RS02775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AHALO_RS02775 PF14572 Phosphoribosyl synthetase-associated domain AHALO_RS02790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AHALO_RS02795 PF00557 Metallopeptidase family M24 AHALO_RS02795 PF01321 Creatinase/Prolidase N-terminal domain AHALO_RS02800 PF01220 Dehydroquinase class II AHALO_RS02805 PF01979 Amidohydrolase family AHALO_RS02810 PF01343 Peptidase family S49 AHALO_RS02815 PF00871 Acetokinase family AHALO_RS02820 PF01515 Phosphate acetyl/butaryl transferase AHALO_RS02825 PF00871 Acetokinase family AHALO_RS02830 PF02811 PHP domain AHALO_RS02830 PF14579 Helix-hairpin-helix motif AHALO_RS02830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AHALO_RS02830 PF07733 Bacterial DNA polymerase III alpha NTPase domain AHALO_RS02830 PF11490 DNA polymerase III polC-type N-terminus II AHALO_RS02830 PF00929 Exonuclease AHALO_RS02830 PF14480 DNA polymerase III polC-type N-terminus I AHALO_RS02840 PF00474 Sodium:solute symporter family AHALO_RS02850 PF00929 Exonuclease AHALO_RS02850 PF14579 Helix-hairpin-helix motif AHALO_RS02850 PF02811 PHP domain AHALO_RS02850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AHALO_RS02850 PF07733 Bacterial DNA polymerase III alpha NTPase domain AHALO_RS02850 PF11490 DNA polymerase III polC-type N-terminus II AHALO_RS02870 PF00072 Response regulator receiver domain AHALO_RS02870 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS02940 PF02464 Competence-damaged protein AHALO_RS02940 PF00994 Probable molybdopterin binding domain AHALO_RS02940 PF18146 Damage-inducible protein CinA KH domain AHALO_RS02945 PF06039 Malate:quinone oxidoreductase (Mqo) AHALO_RS02950 PF08264 Anticodon-binding domain of tRNA AHALO_RS02950 PF00133 tRNA synthetases class I (I, L, M and V) AHALO_RS02965 PF02875 Mur ligase family, glutamate ligase domain AHALO_RS02965 PF08245 Mur ligase middle domain AHALO_RS02985 PF01882 Protein of unknown function DUF58 AHALO_RS02990 PF17863 AAA lid domain AHALO_RS02990 PF07726 ATPase family associated with various cellular activities (AAA) AHALO_RS02995 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AHALO_RS02995 PF01464 Transglycosylase SLT domain AHALO_RS03000 PF00571 CBS domain AHALO_RS03000 PF00005 ABC transporter AHALO_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS03010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AHALO_RS03015 PF00318 Ribosomal protein S2 AHALO_RS03020 PF00889 Elongation factor TS AHALO_RS03025 PF00005 ABC transporter AHALO_RS03035 PF00625 Guanylate kinase AHALO_RS03040 PF10442 FIST C domain AHALO_RS03040 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS03040 PF00563 EAL domain AHALO_RS03040 PF08495 FIST N domain AHALO_RS03045 PF00710 Asparaginase, N-terminal AHALO_RS03045 PF17763 Glutaminase/Asparaginase C-terminal domain AHALO_RS03050 PF00403 Heavy-metal-associated domain AHALO_RS03060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AHALO_RS03065 PF00005 ABC transporter AHALO_RS03065 PF00664 ABC transporter transmembrane region AHALO_RS03070 PF00762 Ferrochelatase AHALO_RS03075 PF01871 AMMECR1 AHALO_RS03080 PF11849 Domain of unknown function (DUF3369) AHALO_RS03085 PF01875 Memo-like protein AHALO_RS03090 PF02698 DUF218 domain AHALO_RS03095 PF00005 ABC transporter AHALO_RS03100 PF00950 ABC 3 transport family AHALO_RS03105 PF17783 CvfB-like winged helix domain AHALO_RS03105 PF13509 S1 domain AHALO_RS03110 PF08534 Redoxin AHALO_RS03120 PF00174 Oxidoreductase molybdopterin binding domain AHALO_RS03125 PF01794 Ferric reductase like transmembrane component AHALO_RS03145 PF01593 Flavin containing amine oxidoreductase AHALO_RS03145 PF02027 RolB/RolC glucosidase family AHALO_RS03165 PF00580 UvrD/REP helicase N-terminal domain AHALO_RS03165 PF13361 UvrD-like helicase C-terminal domain AHALO_RS03170 PF08448 PAS fold AHALO_RS03170 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS03175 PF00174 Oxidoreductase molybdopterin binding domain AHALO_RS03215 PF00149 Calcineurin-like phosphoesterase AHALO_RS03215 PF02872 5'-nucleotidase, C-terminal domain AHALO_RS03245 PF00133 tRNA synthetases class I (I, L, M and V) AHALO_RS03245 PF08264 Anticodon-binding domain of tRNA AHALO_RS03245 PF10458 Valyl tRNA synthetase tRNA binding arm AHALO_RS03260 PF00072 Response regulator receiver domain AHALO_RS03260 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS03265 PF00873 AcrB/AcrD/AcrF family AHALO_RS03275 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS03275 PF02743 Cache domain AHALO_RS03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS03280 PF00072 Response regulator receiver domain AHALO_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS03305 PF07690 Major Facilitator Superfamily AHALO_RS03310 PF01725 Ham1 family AHALO_RS03330 PF14748 Pyrroline-5-carboxylate reductase dimerisation AHALO_RS03330 PF03807 NADP oxidoreductase coenzyme F420-dependent AHALO_RS03335 PF13525 Outer membrane lipoprotein AHALO_RS03340 PF02190 ATP-dependent protease La (LON) substrate-binding domain AHALO_RS03340 PF05362 Lon protease (S16) C-terminal proteolytic domain AHALO_RS03340 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS03355 PF00817 impB/mucB/samB family AHALO_RS03355 PF11799 impB/mucB/samB family C-terminal domain AHALO_RS03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS03370 PF08447 PAS fold AHALO_RS03375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS03375 PF02203 Tar ligand binding domain homologue AHALO_RS03375 PF00672 HAMP domain AHALO_RS03380 PF00403 Heavy-metal-associated domain AHALO_RS03385 PF01022 Bacterial regulatory protein, arsR family AHALO_RS03455 PF01420 Type I restriction modification DNA specificity domain AHALO_RS03460 PF12161 HsdM N-terminal domain AHALO_RS03460 PF02384 N-6 DNA Methylase AHALO_RS03465 PF08463 EcoEI R protein C-terminal AHALO_RS03465 PF04851 Type III restriction enzyme, res subunit AHALO_RS03465 PF00271 Helicase conserved C-terminal domain AHALO_RS03465 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AHALO_RS03515 PF00578 AhpC/TSA family AHALO_RS03520 PF05661 Protein of unknown function (DUF808) AHALO_RS03530 PF00005 ABC transporter AHALO_RS03535 PF00005 ABC transporter AHALO_RS03540 PF12911 N-terminal TM domain of oligopeptide transport permease C AHALO_RS03540 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS03545 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS03550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AHALO_RS03560 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS03560 PF00563 EAL domain AHALO_RS03560 PF03707 Bacterial signalling protein N terminal repeat AHALO_RS03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS03565 PF02203 Tar ligand binding domain homologue AHALO_RS03565 PF00672 HAMP domain AHALO_RS03570 PF00672 HAMP domain AHALO_RS03570 PF02743 Cache domain AHALO_RS03570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS03575 PF00137 ATP synthase subunit C AHALO_RS03600 PF04116 Fatty acid hydroxylase superfamily AHALO_RS03605 PF03150 Di-haem cytochrome c peroxidase AHALO_RS03630 PF12833 Helix-turn-helix domain AHALO_RS03630 PF02311 AraC-like ligand binding domain AHALO_RS03640 PF01297 Zinc-uptake complex component A periplasmic AHALO_RS03645 PF03824 High-affinity nickel-transport protein AHALO_RS03655 PF01053 Cys/Met metabolism PLP-dependent enzyme AHALO_RS03660 PF01053 Cys/Met metabolism PLP-dependent enzyme AHALO_RS03665 PF16199 Radical_SAM C-terminal domain AHALO_RS03665 PF04055 Radical SAM superfamily AHALO_RS03670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AHALO_RS03690 PF00440 Bacterial regulatory proteins, tetR family AHALO_RS03690 PF16295 Tetracyclin repressor-like, C-terminal domain AHALO_RS03700 PF00873 AcrB/AcrD/AcrF family AHALO_RS03715 PF01883 Iron-sulfur cluster assembly protein AHALO_RS03720 PF02657 Fe-S metabolism associated domain AHALO_RS03725 PF00266 Aminotransferase class-V AHALO_RS03730 PF01458 Uncharacterized protein family (UPF0051) AHALO_RS03735 PF00005 ABC transporter AHALO_RS03740 PF01458 Uncharacterized protein family (UPF0051) AHALO_RS03745 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS03750 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHALO_RS03755 PF00266 Aminotransferase class-V AHALO_RS03760 PF04324 BFD-like [2Fe-2S] binding domain AHALO_RS03760 PF01592 NifU-like N terminal domain AHALO_RS03760 PF01106 NifU-like domain AHALO_RS03780 PF14698 Argininosuccinate lyase C-terminal AHALO_RS03780 PF00206 Lyase AHALO_RS03785 PF01584 CheW-like domain AHALO_RS03785 PF00072 Response regulator receiver domain AHALO_RS03790 PF00899 ThiF family AHALO_RS03795 PF01272 Transcription elongation factor, GreA/GreB, C-term AHALO_RS03795 PF03449 Transcription elongation factor, N-terminal AHALO_RS03800 PF01118 Semialdehyde dehydrogenase, NAD binding domain AHALO_RS03800 PF02774 Semialdehyde dehydrogenase, dimerisation domain AHALO_RS03815 PF04851 Type III restriction enzyme, res subunit AHALO_RS03815 PF12344 Ultra-violet resistance protein B AHALO_RS03815 PF00271 Helicase conserved C-terminal domain AHALO_RS03815 PF02151 UvrB/uvrC motif AHALO_RS03815 PF17757 UvrB interaction domain AHALO_RS03820 PF00211 Adenylate and Guanylate cyclase catalytic domain AHALO_RS03820 PF00072 Response regulator receiver domain AHALO_RS03835 PF10576 Iron-sulfur binding domain of endonuclease III AHALO_RS03835 PF00633 Helix-hairpin-helix motif AHALO_RS03835 PF00730 HhH-GPD superfamily base excision DNA repair protein AHALO_RS03860 PF02502 Ribose/Galactose Isomerase AHALO_RS03865 PF10502 Signal peptidase, peptidase S26 AHALO_RS03870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AHALO_RS03870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AHALO_RS03880 PF14693 Ribosomal protein TL5, C-terminal domain AHALO_RS03880 PF01386 Ribosomal L25p family AHALO_RS03885 PF01195 Peptidyl-tRNA hydrolase AHALO_RS03900 PF01520 N-acetylmuramoyl-L-alanine amidase AHALO_RS03910 PF00579 tRNA synthetases class I (W and Y) AHALO_RS03910 PF01479 S4 domain AHALO_RS03915 PF13291 ACT domain AHALO_RS03915 PF02824 TGS domain AHALO_RS03915 PF04607 Region found in RelA / SpoT proteins AHALO_RS03920 PF01192 RNA polymerase Rpb6 AHALO_RS03925 PF00696 Amino acid kinase family AHALO_RS03935 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AHALO_RS03940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AHALO_RS03945 PF04715 Anthranilate synthase component I, N terminal region AHALO_RS03945 PF00425 chorismate binding enzyme AHALO_RS03955 PF00464 Serine hydroxymethyltransferase AHALO_RS03960 PF00152 tRNA synthetases class II (D, K and N) AHALO_RS03960 PF01336 OB-fold nucleic acid binding domain AHALO_RS03970 PF00989 PAS fold AHALO_RS03970 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS03975 PF04551 GcpE protein AHALO_RS03980 PF00772 DnaB-like helicase N terminal domain AHALO_RS03980 PF03796 DnaB-like helicase C terminal domain AHALO_RS03985 PF00483 Nucleotidyl transferase AHALO_RS03990 PF00342 Phosphoglucose isomerase AHALO_RS04005 PF08645 Polynucleotide kinase 3 phosphatase AHALO_RS04015 PF14743 DNA ligase OB-like domain AHALO_RS04015 PF01068 ATP dependent DNA ligase domain AHALO_RS04020 PF01370 NAD dependent epimerase/dehydratase family AHALO_RS04025 PF00294 pfkB family carbohydrate kinase AHALO_RS04025 PF01467 Cytidylyltransferase-like AHALO_RS04030 PF00156 Phosphoribosyl transferase domain AHALO_RS04040 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS04050 PF00883 Cytosol aminopeptidase family, catalytic domain AHALO_RS04050 PF02789 Cytosol aminopeptidase family, N-terminal domain AHALO_RS04055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AHALO_RS04055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AHALO_RS04055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AHALO_RS04060 PF01370 NAD dependent epimerase/dehydratase family AHALO_RS04065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AHALO_RS04065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AHALO_RS04065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AHALO_RS04070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AHALO_RS04070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AHALO_RS04075 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS04080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHALO_RS04085 PF01507 Phosphoadenosine phosphosulfate reductase family AHALO_RS04090 PF00009 Elongation factor Tu GTP binding domain AHALO_RS04105 PF00459 Inositol monophosphatase family AHALO_RS04155 PF02397 Bacterial sugar transferase AHALO_RS04160 PF17836 PglD N-terminal domain AHALO_RS04160 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS04165 PF14602 Hexapeptide repeat of succinyl-transferase AHALO_RS04165 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS04165 PF17836 PglD N-terminal domain AHALO_RS04170 PF01575 MaoC like domain AHALO_RS04175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHALO_RS04180 PF02719 Polysaccharide biosynthesis protein AHALO_RS04185 PF06071 Protein of unknown function (DUF933) AHALO_RS04185 PF01926 50S ribosome-binding GTPase AHALO_RS04205 PF06865 Pyrimidine/purine nucleoside phosphorylase AHALO_RS04220 PF00005 ABC transporter AHALO_RS04225 PF01032 FecCD transport family AHALO_RS04230 PF01497 Periplasmic binding protein AHALO_RS04245 PF01142 tRNA pseudouridine synthase D (TruD) AHALO_RS04255 PF00672 HAMP domain AHALO_RS04255 PF02203 Tar ligand binding domain homologue AHALO_RS04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04260 PF07499 RuvA, C-terminal domain AHALO_RS04260 PF01330 RuvA N terminal domain AHALO_RS04265 PF07478 D-ala D-ala ligase C-terminus AHALO_RS04265 PF01820 D-ala D-ala ligase N-terminus AHALO_RS04275 PF08245 Mur ligase middle domain AHALO_RS04275 PF02875 Mur ligase family, glutamate ligase domain AHALO_RS04280 PF01230 HIT domain AHALO_RS04290 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS04300 PF00005 ABC transporter AHALO_RS04310 PF01266 FAD dependent oxidoreductase AHALO_RS04315 PF00905 Penicillin binding protein transpeptidase domain AHALO_RS04325 PF00338 Ribosomal protein S10p/S20e AHALO_RS04330 PF00297 Ribosomal protein L3 AHALO_RS04335 PF00573 Ribosomal protein L4/L1 family AHALO_RS04340 PF00276 Ribosomal protein L23 AHALO_RS04345 PF00181 Ribosomal Proteins L2, RNA binding domain AHALO_RS04345 PF03947 Ribosomal Proteins L2, C-terminal domain AHALO_RS04350 PF00203 Ribosomal protein S19 AHALO_RS04355 PF00237 Ribosomal protein L22p/L17e AHALO_RS04360 PF00189 Ribosomal protein S3, C-terminal domain AHALO_RS04360 PF07650 KH domain AHALO_RS04365 PF00252 Ribosomal protein L16p/L10e AHALO_RS04370 PF00831 Ribosomal L29 protein AHALO_RS04375 PF00366 Ribosomal protein S17 AHALO_RS04380 PF00238 Ribosomal protein L14p/L23e AHALO_RS04385 PF00467 KOW motif AHALO_RS04385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AHALO_RS04390 PF00281 Ribosomal protein L5 AHALO_RS04390 PF00673 ribosomal L5P family C-terminus AHALO_RS04395 PF00253 Ribosomal protein S14p/S29e AHALO_RS04400 PF00410 Ribosomal protein S8 AHALO_RS04405 PF00347 Ribosomal protein L6 AHALO_RS04410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AHALO_RS04415 PF03719 Ribosomal protein S5, C-terminal domain AHALO_RS04415 PF00333 Ribosomal protein S5, N-terminal domain AHALO_RS04420 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AHALO_RS04425 PF00344 SecY translocase AHALO_RS04430 PF00557 Metallopeptidase family M24 AHALO_RS04435 PF01176 Translation initiation factor 1A / IF-1 AHALO_RS04440 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS04460 PF01336 OB-fold nucleic acid binding domain AHALO_RS04460 PF02938 GAD domain AHALO_RS04460 PF00152 tRNA synthetases class II (D, K and N) AHALO_RS04475 PF04055 Radical SAM superfamily AHALO_RS04475 PF08497 Radical SAM N-terminal AHALO_RS04495 PF01168 Alanine racemase, N-terminal domain AHALO_RS04495 PF00842 Alanine racemase, C-terminal domain AHALO_RS04500 PF02151 UvrB/uvrC motif AHALO_RS04500 PF08459 UvrC Helix-hairpin-helix N-terminal AHALO_RS04500 PF01541 GIY-YIG catalytic domain AHALO_RS04510 PF00072 Response regulator receiver domain AHALO_RS04510 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS04540 PF01556 DnaJ C terminal domain AHALO_RS04540 PF00226 DnaJ domain AHALO_RS04540 PF00684 DnaJ central domain AHALO_RS04550 PF17200 Single Cache domain 2 AHALO_RS04550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04550 PF00672 HAMP domain AHALO_RS04575 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AHALO_RS04580 PF03372 Endonuclease/Exonuclease/phosphatase family AHALO_RS04605 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHALO_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS04625 PF00210 Ferritin-like domain AHALO_RS04630 PF02833 DHHA2 domain AHALO_RS04630 PF01368 DHH family AHALO_RS04635 PF00491 Arginase family AHALO_RS04650 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AHALO_RS04655 PF04073 Aminoacyl-tRNA editing domain AHALO_RS04660 PF05088 Bacterial NAD-glutamate dehydrogenase AHALO_RS04680 PF11066 Protein of unknown function (DUF2867) AHALO_RS04680 PF13460 NAD(P)H-binding AHALO_RS04685 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AHALO_RS04685 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHALO_RS04700 PF03707 Bacterial signalling protein N terminal repeat AHALO_RS04700 PF00563 EAL domain AHALO_RS04700 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS04705 PF00183 Hsp90 protein AHALO_RS04730 PF03466 LysR substrate binding domain AHALO_RS04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS04735 PF00183 Hsp90 protein AHALO_RS04745 PF16868 NMT1-like family AHALO_RS04775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04775 PF17200 Single Cache domain 2 AHALO_RS04775 PF00672 HAMP domain AHALO_RS04780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04780 PF00672 HAMP domain AHALO_RS04780 PF02203 Tar ligand binding domain homologue AHALO_RS04785 PF00072 Response regulator receiver domain AHALO_RS04785 PF12833 Helix-turn-helix domain AHALO_RS04790 PF03480 Bacterial extracellular solute-binding protein, family 7 AHALO_RS04800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AHALO_RS04805 PF03746 LamB/YcsF family AHALO_RS04810 PF02682 Carboxyltransferase domain, subdomain C and D AHALO_RS04815 PF02626 Carboxyltransferase domain, subdomain A and B AHALO_RS04825 PF07581 The GLUG motif AHALO_RS04825 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AHALO_RS04835 PF00563 EAL domain AHALO_RS04850 PF00575 S1 RNA binding domain AHALO_RS04850 PF09371 Tex-like protein N-terminal domain AHALO_RS04850 PF16921 Tex protein YqgF-like domain AHALO_RS04850 PF17674 HHH domain AHALO_RS04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04855 PF00672 HAMP domain AHALO_RS04855 PF02203 Tar ligand binding domain homologue AHALO_RS04860 PF00270 DEAD/DEAH box helicase AHALO_RS04860 PF03880 DbpA RNA binding domain AHALO_RS04860 PF00271 Helicase conserved C-terminal domain AHALO_RS04870 PF00925 GTP cyclohydrolase II AHALO_RS04875 PF02203 Tar ligand binding domain homologue AHALO_RS04875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS04875 PF00672 HAMP domain AHALO_RS04880 PF00034 Cytochrome c AHALO_RS04880 PF03150 Di-haem cytochrome c peroxidase AHALO_RS04885 PF03480 Bacterial extracellular solute-binding protein, family 7 AHALO_RS04890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AHALO_RS04895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AHALO_RS04920 PF09105 Elongation factor SelB, winged helix AHALO_RS04920 PF03144 Elongation factor Tu domain 2 AHALO_RS04920 PF00009 Elongation factor Tu GTP binding domain AHALO_RS04920 PF09106 Elongation factor SelB, winged helix AHALO_RS04920 PF09107 Elongation factor SelB, winged helix AHALO_RS04925 PF03841 L-seryl-tRNA selenium transferase AHALO_RS04930 PF00586 AIR synthase related protein, N-terminal domain AHALO_RS04930 PF02769 AIR synthase related protein, C-terminal domain AHALO_RS04935 PF01841 Transglutaminase-like superfamily AHALO_RS04950 PF00158 Sigma-54 interaction domain AHALO_RS04950 PF00072 Response regulator receiver domain AHALO_RS04955 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS04980 PF01568 Molydopterin dinucleotide binding domain AHALO_RS04980 PF00384 Molybdopterin oxidoreductase AHALO_RS04985 PF00384 Molybdopterin oxidoreductase AHALO_RS04985 PF01568 Molydopterin dinucleotide binding domain AHALO_RS04985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS04990 PF13247 4Fe-4S dicluster domain AHALO_RS05010 PF00037 4Fe-4S binding domain AHALO_RS05010 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHALO_RS05010 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05010 PF00384 Molybdopterin oxidoreductase AHALO_RS05015 PF00384 Molybdopterin oxidoreductase AHALO_RS05015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05015 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05020 PF13247 4Fe-4S dicluster domain AHALO_RS05030 PF02634 FdhD/NarQ family AHALO_RS05040 PF03459 TOBE domain AHALO_RS05040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS05045 PF00266 Aminotransferase class-V AHALO_RS05050 PF00994 Probable molybdopterin binding domain AHALO_RS05050 PF03453 MoeA N-terminal region (domain I and II) AHALO_RS05050 PF03454 MoeA C-terminal region (domain IV) AHALO_RS05055 PF12849 PBP superfamily domain AHALO_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS05065 PF00005 ABC transporter AHALO_RS05075 PF00005 ABC transporter AHALO_RS05075 PF08402 TOBE domain AHALO_RS05080 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS05090 PF01032 FecCD transport family AHALO_RS05095 PF00005 ABC transporter AHALO_RS05115 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS05115 PF00593 TonB dependent receptor AHALO_RS05120 PF00561 alpha/beta hydrolase fold AHALO_RS05130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05130 PF00384 Molybdopterin oxidoreductase AHALO_RS05130 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05135 PF00384 Molybdopterin oxidoreductase AHALO_RS05135 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05140 PF12798 4Fe-4S binding domain AHALO_RS05140 PF00037 4Fe-4S binding domain AHALO_RS05145 PF00361 Proton-conducting membrane transporter AHALO_RS05150 PF00146 NADH dehydrogenase AHALO_RS05155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AHALO_RS05160 PF00361 Proton-conducting membrane transporter AHALO_RS05160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AHALO_RS05165 PF00374 Nickel-dependent hydrogenase AHALO_RS05165 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AHALO_RS05165 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AHALO_RS05175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHALO_RS05190 PF01226 Formate/nitrite transporter AHALO_RS05195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHALO_RS05195 PF00384 Molybdopterin oxidoreductase AHALO_RS05195 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05195 PF00037 4Fe-4S binding domain AHALO_RS05200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS05200 PF01568 Molydopterin dinucleotide binding domain AHALO_RS05200 PF00384 Molybdopterin oxidoreductase AHALO_RS05210 PF13687 Domain of unknown function (DUF4153) AHALO_RS05215 PF01915 Glycosyl hydrolase family 3 C-terminal domain AHALO_RS05215 PF00933 Glycosyl hydrolase family 3 N terminal domain AHALO_RS05230 PF01869 BadF/BadG/BcrA/BcrD ATPase family AHALO_RS05235 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AHALO_RS05265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS05270 PF00999 Sodium/hydrogen exchanger family AHALO_RS05270 PF02254 TrkA-N domain AHALO_RS05275 PF00072 Response regulator receiver domain AHALO_RS05275 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS05280 PF01965 DJ-1/PfpI family AHALO_RS05290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AHALO_RS05290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AHALO_RS05305 PF00563 EAL domain AHALO_RS05305 PF12792 CSS motif domain associated with EAL AHALO_RS05310 PF02600 Disulfide bond formation protein DsbB AHALO_RS05320 PF00578 AhpC/TSA family AHALO_RS05325 PF12833 Helix-turn-helix domain AHALO_RS05330 PF00289 Biotin carboxylase, N-terminal domain AHALO_RS05330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHALO_RS05330 PF02785 Biotin carboxylase C-terminal domain AHALO_RS05335 PF00484 Carbonic anhydrase AHALO_RS05340 PF03737 Aldolase/RraA AHALO_RS05360 PF00194 Eukaryotic-type carbonic anhydrase AHALO_RS05385 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AHALO_RS05385 PF12833 Helix-turn-helix domain AHALO_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS05425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AHALO_RS05425 PF00672 HAMP domain AHALO_RS05425 PF00072 Response regulator receiver domain AHALO_RS05425 PF01627 Hpt domain AHALO_RS05425 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS05430 PF01627 Hpt domain AHALO_RS05430 PF00072 Response regulator receiver domain AHALO_RS05430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AHALO_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS05430 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS05430 PF00672 HAMP domain AHALO_RS05435 PF08447 PAS fold AHALO_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS05435 PF08448 PAS fold AHALO_RS05440 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS05440 PF00072 Response regulator receiver domain AHALO_RS05445 PF13419 Haloacid dehalogenase-like hydrolase AHALO_RS05455 PF03641 Possible lysine decarboxylase AHALO_RS05475 PF01551 Peptidase family M23 AHALO_RS05480 PF10415 Fumarase C C-terminus AHALO_RS05480 PF00206 Lyase AHALO_RS05485 PF01709 Transcriptional regulator AHALO_RS05490 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS05490 PF00072 Response regulator receiver domain AHALO_RS05490 PF01627 Hpt domain AHALO_RS05490 PF00672 HAMP domain AHALO_RS05490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AHALO_RS05495 PF07720 Tetratricopeptide repeat AHALO_RS05495 PF01435 Peptidase family M48 AHALO_RS05500 PF00892 EamA-like transporter family AHALO_RS05510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHALO_RS05510 PF02770 Acyl-CoA dehydrogenase, middle domain AHALO_RS05510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHALO_RS05510 PF09317 Domain of unknown function (DUF1974) AHALO_RS05515 PF06434 Aconitate hydratase 2 N-terminus AHALO_RS05515 PF00330 Aconitase family (aconitate hydratase) AHALO_RS05515 PF11791 Aconitate B N-terminal domain AHALO_RS05525 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AHALO_RS05525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHALO_RS05535 PF10518 TAT (twin-arginine translocation) pathway signal sequence AHALO_RS05535 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AHALO_RS05535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHALO_RS05540 PF00374 Nickel-dependent hydrogenase AHALO_RS05545 PF01292 Prokaryotic cytochrome b561 AHALO_RS05550 PF01750 Hydrogenase maturation protease AHALO_RS05560 PF00708 Acylphosphatase AHALO_RS05560 PF07503 HypF finger AHALO_RS05560 PF17788 HypF Kae1-like domain AHALO_RS05560 PF01300 Telomere recombination AHALO_RS05565 PF00209 Sodium:neurotransmitter symporter family AHALO_RS05570 PF12823 Domain of unknown function (DUF3817) AHALO_RS05575 PF02203 Tar ligand binding domain homologue AHALO_RS05575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS05575 PF00672 HAMP domain AHALO_RS05585 PF02492 CobW/HypB/UreG, nucleotide-binding domain AHALO_RS05590 PF01455 HupF/HypC family AHALO_RS05595 PF01924 Hydrogenase formation hypA family AHALO_RS05600 PF00586 AIR synthase related protein, N-terminal domain AHALO_RS05600 PF02769 AIR synthase related protein, C-terminal domain AHALO_RS05605 PF02911 Formyl transferase, C-terminal domain AHALO_RS05605 PF00378 Enoyl-CoA hydratase/isomerase AHALO_RS05605 PF00551 Formyl transferase AHALO_RS05610 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AHALO_RS05615 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS05625 PF14824 Sirohaem biosynthesis protein central AHALO_RS05625 PF10414 Sirohaem synthase dimerisation region AHALO_RS05625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AHALO_RS05645 PF00271 Helicase conserved C-terminal domain AHALO_RS05645 PF00270 DEAD/DEAH box helicase AHALO_RS05645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AHALO_RS05645 PF18074 Primosomal protein N C-terminal domain AHALO_RS05645 PF17764 3′ DNA-binding domain (3′BD) AHALO_RS05650 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AHALO_RS05650 PF14602 Hexapeptide repeat of succinyl-transferase AHALO_RS05660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHALO_RS05680 PF00005 ABC transporter AHALO_RS05685 PF02390 Putative methyltransferase AHALO_RS05695 PF00849 RNA pseudouridylate synthase AHALO_RS05695 PF01479 S4 domain AHALO_RS05700 PF01098 Cell cycle protein AHALO_RS05710 PF07694 5TMR of 5TMR-LYT AHALO_RS05710 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS05720 PF00202 Aminotransferase class-III AHALO_RS05740 PF04539 Sigma-70 region 3 AHALO_RS05740 PF04542 Sigma-70 region 2 AHALO_RS05740 PF00140 Sigma-70 factor, region 1.2 AHALO_RS05740 PF04545 Sigma-70, region 4 AHALO_RS05745 PF00694 Aconitase C-terminal domain AHALO_RS05750 PF00180 Isocitrate/isopropylmalate dehydrogenase AHALO_RS05770 PF00444 Ribosomal protein L36 AHALO_RS05775 PF00416 Ribosomal protein S13/S18 AHALO_RS05780 PF00411 Ribosomal protein S11 AHALO_RS05785 PF00163 Ribosomal protein S4/S9 N-terminal domain AHALO_RS05785 PF01479 S4 domain AHALO_RS05790 PF01000 RNA polymerase Rpb3/RpoA insert domain AHALO_RS05790 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AHALO_RS05790 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AHALO_RS05795 PF01196 Ribosomal protein L17 AHALO_RS05800 PF01425 Amidase AHALO_RS05805 PF00571 CBS domain AHALO_RS05805 PF00478 IMP dehydrogenase / GMP reductase domain AHALO_RS05835 PF03641 Possible lysine decarboxylase AHALO_RS05855 PF00561 alpha/beta hydrolase fold AHALO_RS05865 PF00899 ThiF family AHALO_RS05870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AHALO_RS05870 PF02142 MGS-like domain AHALO_RS05870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHALO_RS05885 PF12320 Type 5 capsule protein repressor C-terminal domain AHALO_RS05885 PF00149 Calcineurin-like phosphoesterase AHALO_RS05890 PF13476 AAA domain AHALO_RS05900 PF12705 PD-(D/E)XK nuclease superfamily AHALO_RS05900 PF00580 UvrD/REP helicase N-terminal domain AHALO_RS05900 PF13361 UvrD-like helicase C-terminal domain AHALO_RS05910 PF13195 Protein of unknown function (DUF4011) AHALO_RS05910 PF13087 AAA domain AHALO_RS05910 PF13086 AAA domain AHALO_RS05930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AHALO_RS05930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AHALO_RS05940 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS05945 PF01042 Endoribonuclease L-PSP AHALO_RS05950 PF13407 Periplasmic binding protein domain AHALO_RS05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS05955 PF08448 PAS fold AHALO_RS05955 PF08447 PAS fold AHALO_RS05960 PF01047 MarR family AHALO_RS05970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHALO_RS05975 PF00873 AcrB/AcrD/AcrF family AHALO_RS05980 PF00440 Bacterial regulatory proteins, tetR family AHALO_RS05985 PF02028 BCCT, betaine/carnitine/choline family transporter AHALO_RS05990 PF01761 3-dehydroquinate synthase AHALO_RS06000 PF04055 Radical SAM superfamily AHALO_RS06000 PF00919 Uncharacterized protein family UPF0004 AHALO_RS06005 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS06005 PF17862 AAA+ lid domain AHALO_RS06005 PF06480 FtsH Extracellular AHALO_RS06005 PF01434 Peptidase family M41 AHALO_RS06015 PF00994 Probable molybdopterin binding domain AHALO_RS06020 PF00939 Sodium:sulfate symporter transmembrane region AHALO_RS06025 PF01713 Smr domain AHALO_RS06025 PF00488 MutS domain V AHALO_RS06030 PF00924 Mechanosensitive ion channel AHALO_RS06030 PF05552 Conserved TM helix AHALO_RS06045 PF01546 Peptidase family M20/M25/M40 AHALO_RS06045 PF07687 Peptidase dimerisation domain AHALO_RS06070 PF13673 Acetyltransferase (GNAT) domain AHALO_RS06085 PF01177 Asp/Glu/Hydantoin racemase AHALO_RS06090 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AHALO_RS06100 PF02311 AraC-like ligand binding domain AHALO_RS06100 PF12833 Helix-turn-helix domain AHALO_RS06110 PF03600 Citrate transporter AHALO_RS06115 PF03473 MOSC domain AHALO_RS06120 PF03831 PhnA domain AHALO_RS06120 PF08274 PhnA Zinc-Ribbon AHALO_RS06125 PF12833 Helix-turn-helix domain AHALO_RS06175 PF01638 HxlR-like helix-turn-helix AHALO_RS06180 PF02525 Flavodoxin-like fold AHALO_RS06190 PF00881 Nitroreductase family AHALO_RS06200 PF01593 Flavin containing amine oxidoreductase AHALO_RS06205 PF02203 Tar ligand binding domain homologue AHALO_RS06205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06205 PF00672 HAMP domain AHALO_RS06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06210 PF08447 PAS fold AHALO_RS06215 PF03109 ABC1 family AHALO_RS06230 PF08212 Lipocalin-like domain AHALO_RS06245 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AHALO_RS06250 PF12792 CSS motif domain associated with EAL AHALO_RS06250 PF00563 EAL domain AHALO_RS06255 PF02581 Thiamine monophosphate synthase AHALO_RS06260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AHALO_RS06260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AHALO_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS06275 PF08402 TOBE domain AHALO_RS06275 PF00005 ABC transporter AHALO_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS06295 PF03459 TOBE domain AHALO_RS06300 PF00072 Response regulator receiver domain AHALO_RS06305 PF03705 CheR methyltransferase, all-alpha domain AHALO_RS06305 PF01739 CheR methyltransferase, SAM binding domain AHALO_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06310 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS06310 PF09308 LuxQ, periplasmic AHALO_RS06310 PF00072 Response regulator receiver domain AHALO_RS06315 PF00005 ABC transporter AHALO_RS06315 PF12848 ABC transporter AHALO_RS06325 PF01370 NAD dependent epimerase/dehydratase family AHALO_RS06345 PF03061 Thioesterase superfamily AHALO_RS06355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AHALO_RS06355 PF01627 Hpt domain AHALO_RS06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06355 PF00672 HAMP domain AHALO_RS06355 PF00072 Response regulator receiver domain AHALO_RS06355 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS06360 PF03061 Thioesterase superfamily AHALO_RS06365 PF00533 BRCA1 C Terminus (BRCT) domain AHALO_RS06365 PF01653 NAD-dependent DNA ligase adenylation domain AHALO_RS06365 PF03120 NAD-dependent DNA ligase OB-fold domain AHALO_RS06365 PF12826 Helix-hairpin-helix motif AHALO_RS06370 PF08241 Methyltransferase domain AHALO_RS06375 PF01613 Flavin reductase like domain AHALO_RS06380 PF02203 Tar ligand binding domain homologue AHALO_RS06380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06380 PF00672 HAMP domain AHALO_RS06385 PF00206 Lyase AHALO_RS06385 PF10415 Fumarase C C-terminus AHALO_RS06405 PF01575 MaoC like domain AHALO_RS06410 PF00501 AMP-binding enzyme AHALO_RS06410 PF13193 AMP-binding enzyme C-terminal domain AHALO_RS06425 PF01546 Peptidase family M20/M25/M40 AHALO_RS06425 PF07687 Peptidase dimerisation domain AHALO_RS06435 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS06435 PF08495 FIST N domain AHALO_RS06435 PF00563 EAL domain AHALO_RS06435 PF10442 FIST C domain AHALO_RS06440 PF01578 Cytochrome C assembly protein AHALO_RS06440 PF05140 ResB-like family AHALO_RS06445 PF08003 Protein of unknown function (DUF1698) AHALO_RS06450 PF00360 Phytochrome region AHALO_RS06450 PF01590 GAF domain AHALO_RS06450 PF00563 EAL domain AHALO_RS06450 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS06465 PF04305 Protein of unknown function (DUF455) AHALO_RS06470 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS06480 PF01556 DnaJ C terminal domain AHALO_RS06480 PF00226 DnaJ domain AHALO_RS06480 PF00684 DnaJ central domain AHALO_RS06485 PF02132 RecR protein AHALO_RS06485 PF13662 Toprim domain AHALO_RS06490 PF08447 PAS fold AHALO_RS06490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06495 PF02203 Tar ligand binding domain homologue AHALO_RS06495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06495 PF00672 HAMP domain AHALO_RS06505 PF08448 PAS fold AHALO_RS06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06505 PF08447 PAS fold AHALO_RS06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06515 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS06515 PF00989 PAS fold AHALO_RS06515 PF08447 PAS fold AHALO_RS06520 PF00072 Response regulator receiver domain AHALO_RS06520 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS06525 PF12833 Helix-turn-helix domain AHALO_RS06525 PF00072 Response regulator receiver domain AHALO_RS06530 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS06555 PF00764 Arginosuccinate synthase AHALO_RS06565 PF00591 Glycosyl transferase family, a/b domain AHALO_RS06565 PF02885 Glycosyl transferase family, helical bundle domain AHALO_RS06575 PF00005 ABC transporter AHALO_RS06575 PF12399 Branched-chain amino acid ATP-binding cassette transporter AHALO_RS06580 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS06580 PF08448 PAS fold AHALO_RS06585 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS06585 PF08448 PAS fold AHALO_RS06585 PF00563 EAL domain AHALO_RS06590 PF02348 Cytidylyltransferase AHALO_RS06595 PF08448 PAS fold AHALO_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06595 PF08447 PAS fold AHALO_RS06600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AHALO_RS06600 PF01367 5'-3' exonuclease, C-terminal SAM fold AHALO_RS06600 PF00476 DNA polymerase family A AHALO_RS06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS06620 PF08447 PAS fold AHALO_RS06625 PF01790 Prolipoprotein diacylglyceryl transferase AHALO_RS06635 PF06969 HemN C-terminal domain AHALO_RS06635 PF04055 Radical SAM superfamily AHALO_RS06640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AHALO_RS06640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AHALO_RS06660 PF01627 Hpt domain AHALO_RS06660 PF00072 Response regulator receiver domain AHALO_RS06660 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS06665 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AHALO_RS06665 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AHALO_RS06680 PF08447 PAS fold AHALO_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS06680 PF08448 PAS fold AHALO_RS06685 PF00490 Delta-aminolevulinic acid dehydratase AHALO_RS06690 PF00925 GTP cyclohydrolase II AHALO_RS06695 PF02527 rRNA small subunit methyltransferase G AHALO_RS06715 PF02092 Glycyl-tRNA synthetase beta subunit AHALO_RS06765 PF00589 Phage integrase family AHALO_RS06845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AHALO_RS06845 PF00925 GTP cyclohydrolase II AHALO_RS06850 PF01293 Phosphoenolpyruvate carboxykinase AHALO_RS06855 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AHALO_RS06865 PF04277 Oxaloacetate decarboxylase, gamma chain AHALO_RS06880 PF01588 Putative tRNA binding domain AHALO_RS06880 PF00133 tRNA synthetases class I (I, L, M and V) AHALO_RS06880 PF09334 tRNA synthetases class I (M) AHALO_RS06890 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AHALO_RS06910 PF02325 YGGT family AHALO_RS06915 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHALO_RS06920 PF05193 Peptidase M16 inactive domain AHALO_RS06925 PF04055 Radical SAM superfamily AHALO_RS06930 PF01103 Surface antigen AHALO_RS06930 PF07244 Surface antigen variable number repeat AHALO_RS06935 PF01842 ACT domain AHALO_RS06935 PF02153 Prephenate dehydrogenase AHALO_RS06940 PF00809 Pterin binding enzyme AHALO_RS06955 PF13840 ACT domain AHALO_RS06955 PF01842 ACT domain AHALO_RS06955 PF00696 Amino acid kinase family AHALO_RS06960 PF00293 NUDIX domain AHALO_RS06965 PF04055 Radical SAM superfamily AHALO_RS06965 PF06969 HemN C-terminal domain AHALO_RS06970 PF02390 Putative methyltransferase AHALO_RS06970 PF05175 Methyltransferase small domain AHALO_RS06970 PF17827 PrmC N-terminal domain AHALO_RS06975 PF01432 Peptidase family M3 AHALO_RS06990 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS06990 PF03707 Bacterial signalling protein N terminal repeat AHALO_RS06990 PF00563 EAL domain AHALO_RS07010 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AHALO_RS07020 PF05947 Type VI secretion system, TssF AHALO_RS07030 PF17871 AAA lid domain AHALO_RS07030 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS07030 PF07724 AAA domain (Cdc48 subfamily) AHALO_RS07030 PF10431 C-terminal, D2-small domain, of ClpB protein AHALO_RS07045 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AHALO_RS07065 PF00069 Protein kinase domain AHALO_RS07070 PF05638 Type VI secretion system effector, Hcp AHALO_RS07075 PF04717 Type VI secretion system, phage-baseplate injector AHALO_RS07100 PF00589 Phage integrase family AHALO_RS07100 PF18644 Phage integrase SAM-like domain AHALO_RS07105 PF00072 Response regulator receiver domain AHALO_RS07105 PF01339 CheB methylesterase AHALO_RS07110 PF03975 CheD chemotactic sensory transduction AHALO_RS07115 PF03705 CheR methyltransferase, all-alpha domain AHALO_RS07115 PF01739 CheR methyltransferase, SAM binding domain AHALO_RS07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07120 PF01627 Hpt domain AHALO_RS07120 PF09078 CheY binding AHALO_RS07120 PF01584 CheW-like domain AHALO_RS07120 PF02895 Signal transducing histidine kinase, homodimeric domain AHALO_RS07125 PF00072 Response regulator receiver domain AHALO_RS07130 PF00575 S1 RNA binding domain AHALO_RS07130 PF03725 3' exoribonuclease family, domain 2 AHALO_RS07130 PF01138 3' exoribonuclease family, domain 1 AHALO_RS07130 PF00013 KH domain AHALO_RS07130 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AHALO_RS07140 PF04453 LPS transport system D AHALO_RS07140 PF03968 OstA-like protein AHALO_RS07150 PF02844 Phosphoribosylglycinamide synthetase, N domain AHALO_RS07150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AHALO_RS07150 PF02843 Phosphoribosylglycinamide synthetase, C domain AHALO_RS07160 PF01926 50S ribosome-binding GTPase AHALO_RS07160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AHALO_RS07165 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AHALO_RS07165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AHALO_RS07170 PF17854 FtsK alpha domain AHALO_RS07170 PF09397 Ftsk gamma domain AHALO_RS07170 PF01580 FtsK/SpoIIIE family AHALO_RS07175 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AHALO_RS07175 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS07180 PF10369 Small subunit of acetolactate synthase AHALO_RS07185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AHALO_RS07185 PF00205 Thiamine pyrophosphate enzyme, central domain AHALO_RS07185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHALO_RS07190 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS07190 PF07196 Flagellin hook IN motif AHALO_RS07190 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS07195 PF02541 Ppx/GppA phosphatase family AHALO_RS07205 PF01590 GAF domain AHALO_RS07205 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07205 PF00563 EAL domain AHALO_RS07205 PF00360 Phytochrome region AHALO_RS07220 PF00085 Thioredoxin AHALO_RS07235 PF01171 PP-loop family AHALO_RS07240 PF03553 Na+/H+ antiporter family AHALO_RS07240 PF13726 Na+-H+ antiporter family AHALO_RS07250 PF18030 RimK PreATP-grasp domain AHALO_RS07250 PF08443 RimK-like ATP-grasp domain AHALO_RS07265 PF00171 Aldehyde dehydrogenase family AHALO_RS07270 PF00005 ABC transporter AHALO_RS07275 PF00005 ABC transporter AHALO_RS07275 PF12399 Branched-chain amino acid ATP-binding cassette transporter AHALO_RS07280 PF11862 Domain of unknown function (DUF3382) AHALO_RS07280 PF02653 Branched-chain amino acid transport system / permease component AHALO_RS07285 PF02653 Branched-chain amino acid transport system / permease component AHALO_RS07310 PF00072 Response regulator receiver domain AHALO_RS07310 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS07320 PF03453 MoeA N-terminal region (domain I and II) AHALO_RS07320 PF00994 Probable molybdopterin binding domain AHALO_RS07320 PF03454 MoeA C-terminal region (domain IV) AHALO_RS07330 PF07690 Major Facilitator Superfamily AHALO_RS07335 PF02646 RmuC family AHALO_RS07340 PF16491 CAAX prenyl protease N-terminal, five membrane helices AHALO_RS07340 PF01435 Peptidase family M48 AHALO_RS07350 PF08448 PAS fold AHALO_RS07350 PF08447 PAS fold AHALO_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07355 PF03061 Thioesterase superfamily AHALO_RS07360 PF08447 PAS fold AHALO_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07360 PF08448 PAS fold AHALO_RS07370 PF00248 Aldo/keto reductase family AHALO_RS07395 PF00005 ABC transporter AHALO_RS07400 PF01497 Periplasmic binding protein AHALO_RS07405 PF00593 TonB dependent receptor AHALO_RS07405 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS07435 PF09383 NIL domain AHALO_RS07435 PF00005 ABC transporter AHALO_RS07450 PF13419 Haloacid dehalogenase-like hydrolase AHALO_RS07460 PF00672 HAMP domain AHALO_RS07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS07470 PF02472 Biopolymer transport protein ExbD/TolR AHALO_RS07475 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07485 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS07485 PF00072 Response regulator receiver domain AHALO_RS07500 PF00588 SpoU rRNA Methylase family AHALO_RS07505 PF00551 Formyl transferase AHALO_RS07505 PF01842 ACT domain AHALO_RS07510 PF03949 Malic enzyme, NAD binding domain AHALO_RS07510 PF01515 Phosphate acetyl/butaryl transferase AHALO_RS07510 PF00390 Malic enzyme, N-terminal domain AHALO_RS07515 PF02578 Multi-copper polyphenol oxidoreductase laccase AHALO_RS07520 PF08501 Shikimate dehydrogenase substrate binding domain AHALO_RS07530 PF00145 C-5 cytosine-specific DNA methylase AHALO_RS07545 PF02568 Thiamine biosynthesis protein (ThiI) AHALO_RS07545 PF02926 THUMP domain AHALO_RS07555 PF03738 Glutathionylspermidine synthase preATP-grasp AHALO_RS07565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AHALO_RS07570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHALO_RS07575 PF02540 NAD synthase AHALO_RS07590 PF05099 Tellurite resistance protein TerB AHALO_RS07590 PF00226 DnaJ domain AHALO_RS07600 PF00902 Sec-independent protein translocase protein (TatC) AHALO_RS07605 PF02547 Queuosine biosynthesis protein AHALO_RS07615 PF00209 Sodium:neurotransmitter symporter family AHALO_RS07625 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07625 PF07694 5TMR of 5TMR-LYT AHALO_RS07630 PF03781 Sulfatase-modifying factor enzyme 1 AHALO_RS07630 PF12867 DinB superfamily AHALO_RS07645 PF03737 Aldolase/RraA AHALO_RS07650 PF02310 B12 binding domain AHALO_RS07655 PF06368 Methylaspartate mutase E chain (MutE) AHALO_RS07665 PF00501 AMP-binding enzyme AHALO_RS07665 PF13193 AMP-binding enzyme C-terminal domain AHALO_RS07665 PF00550 Phosphopantetheine attachment site AHALO_RS07665 PF00668 Condensation domain AHALO_RS07675 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07690 PF01063 Amino-transferase class IV AHALO_RS07695 PF00873 AcrB/AcrD/AcrF family AHALO_RS07705 PF01795 MraW methylase family AHALO_RS07715 PF00216 Bacterial DNA-binding protein AHALO_RS07725 PF00563 EAL domain AHALO_RS07725 PF00360 Phytochrome region AHALO_RS07725 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07725 PF01590 GAF domain AHALO_RS07735 PF00072 Response regulator receiver domain AHALO_RS07735 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07740 PF07722 Peptidase C26 AHALO_RS07750 PF00583 Acetyltransferase (GNAT) family AHALO_RS07755 PF00202 Aminotransferase class-III AHALO_RS07760 PF06339 Ectoine synthase AHALO_RS07770 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AHALO_RS07775 PF00696 Amino acid kinase family AHALO_RS07775 PF13840 ACT domain AHALO_RS07785 PF07196 Flagellin hook IN motif AHALO_RS07785 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS07785 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07810 PF00072 Response regulator receiver domain AHALO_RS07810 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS07860 PF00529 HlyD membrane-fusion protein of T1SS AHALO_RS07865 PF03412 Peptidase C39 family AHALO_RS07865 PF00005 ABC transporter AHALO_RS07865 PF00664 ABC transporter transmembrane region AHALO_RS07895 PF00072 Response regulator receiver domain AHALO_RS07900 PF00563 EAL domain AHALO_RS07900 PF08495 FIST N domain AHALO_RS07900 PF10442 FIST C domain AHALO_RS07900 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS07905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS07905 PF02203 Tar ligand binding domain homologue AHALO_RS07905 PF00672 HAMP domain AHALO_RS07910 PF00664 ABC transporter transmembrane region AHALO_RS07910 PF00005 ABC transporter AHALO_RS07915 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AHALO_RS07935 PF03548 Outer membrane lipoprotein carrier protein LolA AHALO_RS07940 PF01043 SecA preprotein cross-linking domain AHALO_RS07940 PF02810 SEC-C motif AHALO_RS07940 PF00271 Helicase conserved C-terminal domain AHALO_RS07940 PF07516 SecA Wing and Scaffold domain AHALO_RS07940 PF07517 SecA DEAD-like domain AHALO_RS07945 PF12704 MacB-like periplasmic core domain AHALO_RS07945 PF02687 FtsX-like permease family AHALO_RS07960 PF03971 Monomeric isocitrate dehydrogenase AHALO_RS07970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AHALO_RS07970 PF01266 FAD dependent oxidoreductase AHALO_RS07980 PF00072 Response regulator receiver domain AHALO_RS07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS07990 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS07990 PF00989 PAS fold AHALO_RS07990 PF08447 PAS fold AHALO_RS07995 PF00226 DnaJ domain AHALO_RS07995 PF01556 DnaJ C terminal domain AHALO_RS08000 PF13411 MerR HTH family regulatory protein AHALO_RS08005 PF12327 FtsZ family, C-terminal domain AHALO_RS08005 PF00091 Tubulin/FtsZ family, GTPase domain AHALO_RS08010 PF02491 SHS2 domain inserted in FTSA AHALO_RS08020 PF14490 Helix-hairpin-helix containing domain AHALO_RS08020 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AHALO_RS08020 PF13538 UvrD-like helicase C-terminal domain AHALO_RS08030 PF03960 ArsC family AHALO_RS08045 PF01312 FlhB HrpN YscU SpaS Family AHALO_RS08055 PF03717 Penicillin-binding Protein dimerisation domain AHALO_RS08055 PF00905 Penicillin binding protein transpeptidase domain AHALO_RS08060 PF00813 FliP family AHALO_RS08070 PF00529 HlyD membrane-fusion protein of T1SS AHALO_RS08070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHALO_RS08075 PF00873 AcrB/AcrD/AcrF family AHALO_RS08080 PF00873 AcrB/AcrD/AcrF family AHALO_RS08090 PF00583 Acetyltransferase (GNAT) family AHALO_RS08095 PF01926 50S ribosome-binding GTPase AHALO_RS08115 PF00475 Imidazoleglycerol-phosphate dehydratase AHALO_RS08120 PF03330 Lytic transglycolase AHALO_RS08120 PF05036 Sporulation related domain AHALO_RS08125 PF01520 N-acetylmuramoyl-L-alanine amidase AHALO_RS08125 PF01476 LysM domain AHALO_RS08130 PF01026 TatD related DNase AHALO_RS08140 PF07724 AAA domain (Cdc48 subfamily) AHALO_RS08140 PF10431 C-terminal, D2-small domain, of ClpB protein AHALO_RS08145 PF00227 Proteasome subunit AHALO_RS08150 PF03948 Ribosomal protein L9, C-terminal domain AHALO_RS08150 PF01281 Ribosomal protein L9, N-terminal domain AHALO_RS08160 PF02441 Flavoprotein AHALO_RS08165 PF01467 Cytidylyltransferase-like AHALO_RS08170 PF02223 Thymidylate kinase AHALO_RS08175 PF03129 Anticodon binding domain AHALO_RS08175 PF13393 Histidyl-tRNA synthetase AHALO_RS08180 PF17944 Arginine decarboxylase C-terminal helical extension AHALO_RS08180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AHALO_RS08180 PF17810 Arginine decarboxylase helical bundle domain AHALO_RS08185 PF06426 Serine acetyltransferase, N-terminal AHALO_RS08185 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS08190 PF01925 Sulfite exporter TauE/SafE AHALO_RS08195 PF08447 PAS fold AHALO_RS08195 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS08195 PF00989 PAS fold AHALO_RS08200 PF01546 Peptidase family M20/M25/M40 AHALO_RS08200 PF07687 Peptidase dimerisation domain AHALO_RS08205 PF00202 Aminotransferase class-III AHALO_RS08210 PF00171 Aldehyde dehydrogenase family AHALO_RS08215 PF01321 Creatinase/Prolidase N-terminal domain AHALO_RS08215 PF00557 Metallopeptidase family M24 AHALO_RS08220 PF17760 UvrA interaction domain AHALO_RS08220 PF17755 UvrA DNA-binding domain AHALO_RS08220 PF00005 ABC transporter AHALO_RS08230 PF00375 Sodium:dicarboxylate symporter family AHALO_RS08240 PF01595 Cyclin M transmembrane N-terminal domain AHALO_RS08240 PF03471 Transporter associated domain AHALO_RS08240 PF00571 CBS domain AHALO_RS08245 PF01243 Pyridoxamine 5'-phosphate oxidase AHALO_RS08255 PF01243 Pyridoxamine 5'-phosphate oxidase AHALO_RS08255 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AHALO_RS08260 PF00255 Glutathione peroxidase AHALO_RS08290 PF03180 NLPA lipoprotein AHALO_RS08295 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS08300 PF09383 NIL domain AHALO_RS08300 PF00005 ABC transporter AHALO_RS08305 PF00106 short chain dehydrogenase AHALO_RS08310 PF07690 Major Facilitator Superfamily AHALO_RS08320 PF00375 Sodium:dicarboxylate symporter family AHALO_RS08325 PF10672 S-adenosylmethionine-dependent methyltransferase AHALO_RS08325 PF17785 PUA-like domain AHALO_RS08330 PF01272 Transcription elongation factor, GreA/GreB, C-term AHALO_RS08330 PF03449 Transcription elongation factor, N-terminal AHALO_RS08345 PF01740 STAS domain AHALO_RS08345 PF00916 Sulfate permease family AHALO_RS08355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AHALO_RS08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS08360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AHALO_RS08360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AHALO_RS08375 PF17746 SfsA N-terminal OB domain AHALO_RS08375 PF03749 Sugar fermentation stimulation protein RE domain AHALO_RS08390 PF07995 Glucose / Sorbosone dehydrogenase AHALO_RS08395 PF00270 DEAD/DEAH box helicase AHALO_RS08395 PF00271 Helicase conserved C-terminal domain AHALO_RS08395 PF08482 ATP-dependent helicase C-terminal AHALO_RS08395 PF04408 Helicase associated domain (HA2) AHALO_RS08430 PF00589 Phage integrase family AHALO_RS08520 PF01553 Acyltransferase AHALO_RS08525 PF00561 alpha/beta hydrolase fold AHALO_RS08545 PF00313 'Cold-shock' DNA-binding domain AHALO_RS08590 PF02540 NAD synthase AHALO_RS08590 PF00958 GMP synthase C terminal domain AHALO_RS08590 PF00117 Glutamine amidotransferase class-I AHALO_RS08600 PF03600 Citrate transporter AHALO_RS08605 PF00890 FAD binding domain AHALO_RS08605 PF02910 Fumarate reductase flavoprotein C-term AHALO_RS08620 PF00155 Aminotransferase class I and II AHALO_RS08625 PF16916 Dimerisation domain of Zinc Transporter AHALO_RS08625 PF01545 Cation efflux family AHALO_RS08635 PF02203 Tar ligand binding domain homologue AHALO_RS08635 PF00672 HAMP domain AHALO_RS08635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS08640 PF02203 Tar ligand binding domain homologue AHALO_RS08640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS08640 PF00672 HAMP domain AHALO_RS08645 PF01717 Cobalamin-independent synthase, Catalytic domain AHALO_RS08645 PF08267 Cobalamin-independent synthase, N-terminal domain AHALO_RS08655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AHALO_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS08660 PF02817 e3 binding domain AHALO_RS08660 PF00364 Biotin-requiring enzyme AHALO_RS08660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AHALO_RS08665 PF00456 Transketolase, thiamine diphosphate binding domain AHALO_RS08665 PF17831 Pyruvate dehydrogenase E1 component middle domain AHALO_RS08670 PF03099 Biotin/lipoate A/B protein ligase family AHALO_RS08675 PF04055 Radical SAM superfamily AHALO_RS08680 PF00056 lactate/malate dehydrogenase, NAD binding domain AHALO_RS08680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AHALO_RS08685 PF00005 ABC transporter AHALO_RS08685 PF16326 ABC transporter C-terminal domain AHALO_RS08685 PF12848 ABC transporter AHALO_RS08690 PF09424 Yqey-like protein AHALO_RS08695 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS08695 PF17151 Periplasmic sensor domain AHALO_RS08700 PF01966 HD domain AHALO_RS08715 PF00106 short chain dehydrogenase AHALO_RS08720 PF03553 Na+/H+ antiporter family AHALO_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS08725 PF12911 N-terminal TM domain of oligopeptide transport permease C AHALO_RS08735 PF00731 AIR carboxylase AHALO_RS08740 PF02222 ATP-grasp domain AHALO_RS08740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AHALO_RS08750 PF00013 KH domain AHALO_RS08750 PF01966 HD domain AHALO_RS08750 PF12072 Domain of unknown function (DUF3552) AHALO_RS08760 PF00578 AhpC/TSA family AHALO_RS08765 PF00448 SRP54-type protein, GTPase domain AHALO_RS08775 PF00072 Response regulator receiver domain AHALO_RS08775 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS08780 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS08785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AHALO_RS08800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS08800 PF02203 Tar ligand binding domain homologue AHALO_RS08800 PF00672 HAMP domain AHALO_RS08805 PF18073 Rubredoxin metal binding domain AHALO_RS08815 PF02130 Uncharacterized protein family UPF0054 AHALO_RS08820 PF01699 Sodium/calcium exchanger protein AHALO_RS08830 PF00210 Ferritin-like domain AHALO_RS08835 PF02915 Rubrerythrin AHALO_RS08860 PF03023 Lipid II flippase MurJ AHALO_RS08865 PF00005 ABC transporter AHALO_RS08865 PF00664 ABC transporter transmembrane region AHALO_RS08870 PF01180 Dihydroorotate dehydrogenase AHALO_RS08880 PF00701 Dihydrodipicolinate synthetase family AHALO_RS08890 PF01066 CDP-alcohol phosphatidyltransferase AHALO_RS08895 PF02163 Peptidase family M50 AHALO_RS08895 PF17820 PDZ domain AHALO_RS08900 PF01168 Alanine racemase, N-terminal domain AHALO_RS08920 PF18030 RimK PreATP-grasp domain AHALO_RS08920 PF08443 RimK-like ATP-grasp domain AHALO_RS08925 PF00218 Indole-3-glycerol phosphate synthase AHALO_RS08935 PF03692 Putative zinc- or iron-chelating domain AHALO_RS08940 PF05175 Methyltransferase small domain AHALO_RS08950 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AHALO_RS08950 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AHALO_RS08950 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AHALO_RS08955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHALO_RS08955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AHALO_RS08955 PF00205 Thiamine pyrophosphate enzyme, central domain AHALO_RS08965 PF00893 Small Multidrug Resistance protein AHALO_RS08975 PF04607 Region found in RelA / SpoT proteins AHALO_RS08975 PF13291 ACT domain AHALO_RS08975 PF02824 TGS domain AHALO_RS08980 PF11490 DNA polymerase III polC-type N-terminus II AHALO_RS08980 PF07733 Bacterial DNA polymerase III alpha NTPase domain AHALO_RS08980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AHALO_RS08980 PF14579 Helix-hairpin-helix motif AHALO_RS08980 PF02811 PHP domain AHALO_RS08980 PF00929 Exonuclease AHALO_RS08980 PF14480 DNA polymerase III polC-type N-terminus I AHALO_RS08985 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AHALO_RS08990 PF00072 Response regulator receiver domain AHALO_RS08990 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS08995 PF00834 Ribulose-phosphate 3 epimerase family AHALO_RS09000 PF02470 MlaD protein AHALO_RS09005 PF04403 Paraquat-inducible protein A AHALO_RS09010 PF04403 Paraquat-inducible protein A AHALO_RS09015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHALO_RS09030 PF02253 Phospholipase A1 AHALO_RS09035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AHALO_RS09035 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AHALO_RS09035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AHALO_RS09045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS09045 PF08447 PAS fold AHALO_RS09055 PF02661 Fic/DOC family AHALO_RS09055 PF12796 Ankyrin repeats (3 copies) AHALO_RS09065 PF00293 NUDIX domain AHALO_RS09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09080 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS09080 PF00072 Response regulator receiver domain AHALO_RS09085 PF03601 Conserved hypothetical protein 698 AHALO_RS09090 PF03466 LysR substrate binding domain AHALO_RS09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS09100 PF04461 Protein of unknown function (DUF520) AHALO_RS09105 PF08447 PAS fold AHALO_RS09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09105 PF08448 PAS fold AHALO_RS09115 PF00860 Permease family AHALO_RS09130 PF04241 Protein of unknown function (DUF423) AHALO_RS09140 PF00156 Phosphoribosyl transferase domain AHALO_RS09145 PF00860 Permease family AHALO_RS09155 PF00155 Aminotransferase class I and II AHALO_RS09160 PF02311 AraC-like ligand binding domain AHALO_RS09160 PF12833 Helix-turn-helix domain AHALO_RS09165 PF11849 Domain of unknown function (DUF3369) AHALO_RS09175 PF01022 Bacterial regulatory protein, arsR family AHALO_RS09180 PF00403 Heavy-metal-associated domain AHALO_RS09185 PF00593 TonB dependent receptor AHALO_RS09185 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09190 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS09195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AHALO_RS09200 PF00072 Response regulator receiver domain AHALO_RS09200 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS09210 PF00384 Molybdopterin oxidoreductase AHALO_RS09210 PF01568 Molydopterin dinucleotide binding domain AHALO_RS09210 PF18364 Molybdopterin oxidoreductase N-terminal domain AHALO_RS09215 PF00465 Iron-containing alcohol dehydrogenase AHALO_RS09230 PF04023 FeoA domain AHALO_RS09235 PF07670 Nucleoside recognition AHALO_RS09235 PF04023 FeoA domain AHALO_RS09235 PF17910 FeoB cytosolic helical domain AHALO_RS09235 PF07664 Ferrous iron transport protein B C terminus AHALO_RS09235 PF02421 Ferrous iron transport protein B AHALO_RS09275 PF04055 Radical SAM superfamily AHALO_RS09280 PF01208 Uroporphyrinogen decarboxylase (URO-D) AHALO_RS09290 PF01118 Semialdehyde dehydrogenase, NAD binding domain AHALO_RS09290 PF02774 Semialdehyde dehydrogenase, dimerisation domain AHALO_RS09295 PF00521 DNA gyrase/topoisomerase IV, subunit A AHALO_RS09295 PF03989 DNA gyrase C-terminal domain, beta-propeller AHALO_RS09305 PF01960 ArgJ family AHALO_RS09315 PF00830 Ribosomal L28 family AHALO_RS09325 PF13580 SIS domain AHALO_RS09330 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AHALO_RS09345 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AHALO_RS09355 PF10707 PhoP regulatory network protein YrbL AHALO_RS09360 PF13439 Glycosyltransferase Family 4 AHALO_RS09360 PF00534 Glycosyl transferases group 1 AHALO_RS09365 PF00535 Glycosyl transferase family 2 AHALO_RS09380 PF00682 HMGL-like AHALO_RS09380 PF07836 DmpG-like communication domain AHALO_RS09410 PF01219 Prokaryotic diacylglycerol kinase AHALO_RS09420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AHALO_RS09430 PF00037 4Fe-4S binding domain AHALO_RS09435 PF00459 Inositol monophosphatase family AHALO_RS09440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AHALO_RS09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS09445 PF01493 GXGXG motif AHALO_RS09445 PF04898 Glutamate synthase central domain AHALO_RS09445 PF00310 Glutamine amidotransferases class-II AHALO_RS09445 PF01645 Conserved region in glutamate synthase AHALO_RS09450 PF03480 Bacterial extracellular solute-binding protein, family 7 AHALO_RS09460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AHALO_RS09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09465 PF08448 PAS fold AHALO_RS09465 PF08447 PAS fold AHALO_RS09470 PF12833 Helix-turn-helix domain AHALO_RS09470 PF00072 Response regulator receiver domain AHALO_RS09485 PF00962 Adenosine/AMP deaminase AHALO_RS09490 PF01966 HD domain AHALO_RS09500 PF01361 Tautomerase enzyme AHALO_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHALO_RS09510 PF03466 LysR substrate binding domain AHALO_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09540 PF07568 Histidine kinase AHALO_RS09540 PF12282 Signal transduction histidine kinase AHALO_RS09545 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS09545 PF00072 Response regulator receiver domain AHALO_RS09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09595 PF08448 PAS fold AHALO_RS09595 PF08447 PAS fold AHALO_RS09645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AHALO_RS09650 PF01029 NusB family AHALO_RS09655 PF00885 6,7-dimethyl-8-ribityllumazine synthase AHALO_RS09660 PF00793 DAHP synthetase I family AHALO_RS09675 PF01645 Conserved region in glutamate synthase AHALO_RS09685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AHALO_RS09700 PF00263 Bacterial type II and III secretion system protein AHALO_RS09700 PF03958 Bacterial type II/III secretion system short domain AHALO_RS09705 PF01205 Uncharacterized protein family UPF0029 AHALO_RS09705 PF09186 Domain of unknown function (DUF1949) AHALO_RS09710 PF01728 FtsJ-like methyltransferase AHALO_RS09710 PF01479 S4 domain AHALO_RS09720 PF13649 Methyltransferase domain AHALO_RS09725 PF00578 AhpC/TSA family AHALO_RS09735 PF01565 FAD binding domain AHALO_RS09735 PF02913 FAD linked oxidases, C-terminal domain AHALO_RS09740 PF03631 Virulence factor BrkB AHALO_RS09745 PF01590 GAF domain AHALO_RS09745 PF00360 Phytochrome region AHALO_RS09745 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS09745 PF00563 EAL domain AHALO_RS09780 PF01048 Phosphorylase superfamily AHALO_RS09785 PF00698 Acyl transferase domain AHALO_RS09790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHALO_RS09805 PF04052 TolB amino-terminal domain AHALO_RS09815 PF02472 Biopolymer transport protein ExbD/TolR AHALO_RS09820 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS09825 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AHALO_RS09830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHALO_RS09830 PF02874 ATP synthase alpha/beta family, beta-barrel domain AHALO_RS09835 PF00231 ATP synthase AHALO_RS09840 PF02874 ATP synthase alpha/beta family, beta-barrel domain AHALO_RS09840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHALO_RS09840 PF00306 ATP synthase alpha/beta chain, C terminal domain AHALO_RS09845 PF00213 ATP synthase delta (OSCP) subunit AHALO_RS09850 PF00430 ATP synthase B/B' CF(0) AHALO_RS09860 PF02195 ParB-like nuclease domain AHALO_RS09860 PF17762 HTH domain found in ParB protein AHALO_RS09865 PF13614 AAA domain AHALO_RS09880 PF08447 PAS fold AHALO_RS09880 PF08448 PAS fold AHALO_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS09885 PF00551 Formyl transferase AHALO_RS09885 PF02911 Formyl transferase, C-terminal domain AHALO_RS09890 PF00696 Amino acid kinase family AHALO_RS09895 PF01926 50S ribosome-binding GTPase AHALO_RS09895 PF01018 GTP1/OBG AHALO_RS09900 PF01016 Ribosomal L27 protein AHALO_RS09905 PF00829 Ribosomal prokaryotic L21 protein AHALO_RS09910 PF01042 Endoribonuclease L-PSP AHALO_RS09915 PF13662 Toprim domain AHALO_RS09915 PF01807 CHC2 zinc finger AHALO_RS09915 PF08275 DNA primase catalytic core, N-terminal domain AHALO_RS09915 PF16730 DnaG-primase C-terminal, helicase-binding domain AHALO_RS09925 PF00075 RNase H AHALO_RS09930 PF00035 Double-stranded RNA binding motif AHALO_RS09930 PF14622 Ribonuclease-III-like AHALO_RS09935 PF01264 Chorismate synthase AHALO_RS09945 PF02001 Protein of unknown function DUF134 AHALO_RS09950 PF01435 Peptidase family M48 AHALO_RS09965 PF12631 MnmE helical domain AHALO_RS09965 PF01926 50S ribosome-binding GTPase AHALO_RS09965 PF10396 GTP-binding protein TrmE N-terminus AHALO_RS09975 PF02096 60Kd inner membrane protein AHALO_RS09975 PF14849 YidC periplasmic domain AHALO_RS09980 PF01809 Putative membrane protein insertion efficiency factor AHALO_RS09985 PF00825 Ribonuclease P AHALO_RS09990 PF00468 Ribosomal protein L34 AHALO_RS09995 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10000 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS10000 PF02861 Clp amino terminal domain, pathogenicity island component AHALO_RS10000 PF07724 AAA domain (Cdc48 subfamily) AHALO_RS10000 PF10431 C-terminal, D2-small domain, of ClpB protein AHALO_RS10000 PF17871 AAA lid domain AHALO_RS10005 PF08447 PAS fold AHALO_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10005 PF08448 PAS fold AHALO_RS10020 PF01351 Ribonuclease HII AHALO_RS10030 PF00563 EAL domain AHALO_RS10030 PF08448 PAS fold AHALO_RS10030 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS10040 PF01625 Peptide methionine sulfoxide reductase AHALO_RS10040 PF01641 SelR domain AHALO_RS10045 PF01557 Fumarylacetoacetate (FAA) hydrolase family AHALO_RS10055 PF00202 Aminotransferase class-III AHALO_RS10070 PF02447 GntP family permease AHALO_RS10075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AHALO_RS10105 PF01808 AICARFT/IMPCHase bienzyme AHALO_RS10105 PF02142 MGS-like domain AHALO_RS10110 PF02769 AIR synthase related protein, C-terminal domain AHALO_RS10110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AHALO_RS10110 PF00586 AIR synthase related protein, N-terminal domain AHALO_RS10120 PF10145 Phage-related minor tail protein AHALO_RS10120 PF01551 Peptidase family M23 AHALO_RS10120 PF01464 Transglycosylase SLT domain AHALO_RS10125 PF01769 Divalent cation transporter AHALO_RS10125 PF00571 CBS domain AHALO_RS10125 PF03448 MgtE intracellular N domain AHALO_RS10135 PF02028 BCCT, betaine/carnitine/choline family transporter AHALO_RS10140 PF01227 GTP cyclohydrolase I AHALO_RS10150 PF00437 Type II/IV secretion system protein AHALO_RS10165 PF03441 FAD binding domain of DNA photolyase AHALO_RS10165 PF00875 DNA photolyase AHALO_RS10180 PF00474 Sodium:solute symporter family AHALO_RS10185 PF08543 Phosphomethylpyrimidine kinase AHALO_RS10190 PF04397 LytTr DNA-binding domain AHALO_RS10190 PF00072 Response regulator receiver domain AHALO_RS10195 PF06580 Histidine kinase AHALO_RS10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10195 PF07694 5TMR of 5TMR-LYT AHALO_RS10205 PF00762 Ferrochelatase AHALO_RS10210 PF03734 L,D-transpeptidase catalytic domain AHALO_RS10210 PF01471 Putative peptidoglycan binding domain AHALO_RS10220 PF01926 50S ribosome-binding GTPase AHALO_RS10220 PF07650 KH domain AHALO_RS10225 PF01078 Magnesium chelatase, subunit ChlI AHALO_RS10225 PF13335 Magnesium chelatase, subunit ChlI C-terminal AHALO_RS10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS10230 PF08447 PAS fold AHALO_RS10230 PF13426 PAS domain AHALO_RS10240 PF01327 Polypeptide deformylase AHALO_RS10245 PF00574 Clp protease AHALO_RS10250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHALO_RS10250 PF05698 Bacterial trigger factor protein (TF) C-terminus AHALO_RS10250 PF05697 Bacterial trigger factor protein (TF) AHALO_RS10270 PF03976 Polyphosphate kinase 2 (PPK2) AHALO_RS10275 PF03976 Polyphosphate kinase 2 (PPK2) AHALO_RS10280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AHALO_RS10285 PF00301 Rubredoxin AHALO_RS10290 PF03435 Saccharopine dehydrogenase NADP binding domain AHALO_RS10290 PF16653 Saccharopine dehydrogenase C-terminal domain AHALO_RS10300 PF06969 HemN C-terminal domain AHALO_RS10300 PF04055 Radical SAM superfamily AHALO_RS10320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS10320 PF02203 Tar ligand binding domain homologue AHALO_RS10320 PF00672 HAMP domain AHALO_RS10330 PF00924 Mechanosensitive ion channel AHALO_RS10345 PF01654 Cytochrome bd terminal oxidase subunit I AHALO_RS10355 PF02001 Protein of unknown function DUF134 AHALO_RS10360 PF00293 NUDIX domain AHALO_RS10365 PF08447 PAS fold AHALO_RS10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10365 PF08448 PAS fold AHALO_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS10385 PF00005 ABC transporter AHALO_RS10395 PF00593 TonB dependent receptor AHALO_RS10395 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS10420 PF00258 Flavodoxin AHALO_RS10425 PF00258 Flavodoxin AHALO_RS10430 PF00258 Flavodoxin AHALO_RS10435 PF01475 Ferric uptake regulator family AHALO_RS10475 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS10485 PF07670 Nucleoside recognition AHALO_RS10485 PF02421 Ferrous iron transport protein B AHALO_RS10485 PF07664 Ferrous iron transport protein B C terminus AHALO_RS10490 PF01475 Ferric uptake regulator family AHALO_RS10510 PF04376 Arginine-tRNA-protein transferase, N terminus AHALO_RS10510 PF04377 Arginine-tRNA-protein transferase, C terminus AHALO_RS10515 PF00290 Tryptophan synthase alpha chain AHALO_RS10520 PF02548 Ketopantoate hydroxymethyltransferase AHALO_RS10525 PF05496 Holliday junction DNA helicase RuvB P-loop domain AHALO_RS10525 PF05491 RuvB C-terminal winged helix domain AHALO_RS10525 PF17864 RuvB AAA lid domain AHALO_RS10530 PF01594 AI-2E family transporter AHALO_RS10535 PF00072 Response regulator receiver domain AHALO_RS10535 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS10550 PF01867 CRISPR associated protein Cas1 AHALO_RS10555 PF13635 Domain of unknown function (DUF4143) AHALO_RS10555 PF13173 AAA domain AHALO_RS10565 PF18395 Cas3 C-terminal domain AHALO_RS10565 PF00270 DEAD/DEAH box helicase AHALO_RS10565 PF18019 HD domain AHALO_RS10590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AHALO_RS10595 PF07196 Flagellin hook IN motif AHALO_RS10595 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS10595 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS10595 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS10595 PF07196 Flagellin hook IN motif AHALO_RS10595 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS10605 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS10605 PF02861 Clp amino terminal domain, pathogenicity island component AHALO_RS10605 PF17871 AAA lid domain AHALO_RS10605 PF07724 AAA domain (Cdc48 subfamily) AHALO_RS10605 PF10431 C-terminal, D2-small domain, of ClpB protein AHALO_RS10610 PF02617 ATP-dependent Clp protease adaptor protein ClpS AHALO_RS10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10620 PF08447 PAS fold AHALO_RS10620 PF08448 PAS fold AHALO_RS10645 PF00771 FHIPEP family AHALO_RS10655 PF18269 T3SS EscN ATPase C-terminal domain AHALO_RS10655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHALO_RS10665 PF01312 FlhB HrpN YscU SpaS Family AHALO_RS10680 PF00460 Flagella basal body rod protein AHALO_RS10680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS10685 PF02049 Flagellar hook-basal body complex protein FliE AHALO_RS10695 PF10609 NUBPL iron-transfer P-loop NTPase AHALO_RS10700 PF00448 SRP54-type protein, GTPase domain AHALO_RS10725 PF01618 MotA/TolQ/ExbB proton channel family AHALO_RS10730 PF04509 CheC-like family AHALO_RS10730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AHALO_RS10750 PF00460 Flagella basal body rod protein AHALO_RS10750 PF07559 Flagellar basal body protein FlaE AHALO_RS10750 PF07196 Flagellin hook IN motif AHALO_RS10750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS10755 PF00460 Flagella basal body rod protein AHALO_RS10755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS10755 PF07559 Flagellar basal body protein FlaE AHALO_RS10765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AHALO_RS10775 PF14842 FliG N-terminal domain AHALO_RS10775 PF14841 FliG middle domain AHALO_RS10775 PF01706 FliG C-terminal domain AHALO_RS10780 PF08345 Flagellar M-ring protein C-terminal AHALO_RS10780 PF01514 Secretory protein of YscJ/FliF family AHALO_RS10785 PF00460 Flagella basal body rod protein AHALO_RS10790 PF00460 Flagella basal body rod protein AHALO_RS10790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS10800 PF00072 Response regulator receiver domain AHALO_RS10805 PF00460 Flagella basal body rod protein AHALO_RS10805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS10820 PF01782 RimM N-terminal domain AHALO_RS10830 PF00886 Ribosomal protein S16 AHALO_RS10835 PF00448 SRP54-type protein, GTPase domain AHALO_RS10835 PF02881 SRP54-type protein, helical bundle domain AHALO_RS10835 PF02978 Signal peptide binding domain AHALO_RS10840 PF00849 RNA pseudouridylate synthase AHALO_RS10845 PF02390 Putative methyltransferase AHALO_RS10845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AHALO_RS10855 PF01784 NIF3 (NGG1p interacting factor 3) AHALO_RS10860 PF02091 Glycyl-tRNA synthetase alpha subunit AHALO_RS10875 PF01136 Peptidase family U32 AHALO_RS10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS10880 PF00672 HAMP domain AHALO_RS10880 PF17200 Single Cache domain 2 AHALO_RS10880 PF17200 Single Cache domain 2 AHALO_RS10880 PF00672 HAMP domain AHALO_RS10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS10890 PF13476 AAA domain AHALO_RS10895 PF01513 ATP-NAD kinase AHALO_RS10900 PF03764 Elongation factor G, domain IV AHALO_RS10900 PF14492 Elongation Factor G, domain II AHALO_RS10900 PF00679 Elongation factor G C-terminus AHALO_RS10900 PF00009 Elongation factor Tu GTP binding domain AHALO_RS10900 PF03144 Elongation factor Tu domain 2 AHALO_RS10905 PF00177 Ribosomal protein S7p/S5e AHALO_RS10910 PF00164 Ribosomal protein S12/S23 AHALO_RS10915 PF07690 Major Facilitator Superfamily AHALO_RS10930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AHALO_RS10935 PF09962 Uncharacterized conserved protein (DUF2196) AHALO_RS10960 PF00005 ABC transporter AHALO_RS10975 PF01891 Cobalt uptake substrate-specific transmembrane region AHALO_RS10985 PF08448 PAS fold AHALO_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS10985 PF08447 PAS fold AHALO_RS10990 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS10990 PF00072 Response regulator receiver domain AHALO_RS11000 PF00384 Molybdopterin oxidoreductase AHALO_RS11000 PF18364 Molybdopterin oxidoreductase N-terminal domain AHALO_RS11000 PF01568 Molydopterin dinucleotide binding domain AHALO_RS11005 PF03458 UPF0126 domain AHALO_RS11050 PF00589 Phage integrase family AHALO_RS11050 PF13356 Arm DNA-binding domain AHALO_RS11070 PF04997 RNA polymerase Rpb1, domain 1 AHALO_RS11070 PF04983 RNA polymerase Rpb1, domain 3 AHALO_RS11070 PF05000 RNA polymerase Rpb1, domain 4 AHALO_RS11070 PF00623 RNA polymerase Rpb1, domain 2 AHALO_RS11070 PF04998 RNA polymerase Rpb1, domain 5 AHALO_RS11075 PF04561 RNA polymerase Rpb2, domain 2 AHALO_RS11075 PF04563 RNA polymerase beta subunit AHALO_RS11075 PF04565 RNA polymerase Rpb2, domain 3 AHALO_RS11075 PF00562 RNA polymerase Rpb2, domain 6 AHALO_RS11075 PF10385 RNA polymerase beta subunit external 1 domain AHALO_RS11075 PF04560 RNA polymerase Rpb2, domain 7 AHALO_RS11080 PF00542 Ribosomal protein L7/L12 C-terminal domain AHALO_RS11080 PF16320 Ribosomal protein L7/L12 dimerisation domain AHALO_RS11085 PF00466 Ribosomal protein L10 AHALO_RS11090 PF00687 Ribosomal protein L1p/L10e family AHALO_RS11095 PF03946 Ribosomal protein L11, N-terminal domain AHALO_RS11095 PF00298 Ribosomal protein L11, RNA binding domain AHALO_RS11100 PF02357 Transcription termination factor nusG AHALO_RS11115 PF00471 Ribosomal protein L33 AHALO_RS11120 PF00009 Elongation factor Tu GTP binding domain AHALO_RS11120 PF03144 Elongation factor Tu domain 2 AHALO_RS11120 PF03143 Elongation factor Tu C-terminal domain AHALO_RS11145 PF08245 Mur ligase middle domain AHALO_RS11150 PF00953 Glycosyl transferase family 4 AHALO_RS11150 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AHALO_RS11155 PF01676 Metalloenzyme superfamily AHALO_RS11155 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AHALO_RS11160 PF00158 Sigma-54 interaction domain AHALO_RS11160 PF02954 Bacterial regulatory protein, Fis family AHALO_RS11160 PF00072 Response regulator receiver domain AHALO_RS11165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AHALO_RS11165 PF00005 ABC transporter AHALO_RS11170 PF00905 Penicillin binding protein transpeptidase domain AHALO_RS11170 PF00912 Transglycosylase AHALO_RS11175 PF00120 Glutamine synthetase, catalytic domain AHALO_RS11175 PF03951 Glutamine synthetase, beta-Grasp domain AHALO_RS11180 PF02811 PHP domain AHALO_RS11185 PF17158 Membrane-associated sensor, integral membrane domain AHALO_RS11185 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS11190 PF02391 MoaE protein AHALO_RS11200 PF02621 Menaquinone biosynthesis AHALO_RS11205 PF02673 Bacitracin resistance protein BacA AHALO_RS11210 PF04101 Glycosyltransferase family 28 C-terminal domain AHALO_RS11210 PF03033 Glycosyltransferase family 28 N-terminal domain AHALO_RS11215 PF01098 Cell cycle protein AHALO_RS11220 PF00905 Penicillin binding protein transpeptidase domain AHALO_RS11220 PF03717 Penicillin-binding Protein dimerisation domain AHALO_RS11225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AHALO_RS11270 PF00117 Glutamine amidotransferase class-I AHALO_RS11295 PF02463 RecF/RecN/SMC N terminal domain AHALO_RS11300 PF12161 HsdM N-terminal domain AHALO_RS11300 PF02384 N-6 DNA Methylase AHALO_RS11305 PF00271 Helicase conserved C-terminal domain AHALO_RS11305 PF04851 Type III restriction enzyme, res subunit AHALO_RS11305 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AHALO_RS11305 PF08463 EcoEI R protein C-terminal AHALO_RS11325 PF00239 Resolvase, N terminal domain AHALO_RS11325 PF02796 Helix-turn-helix domain of resolvase AHALO_RS11375 PF13416 Bacterial extracellular solute-binding protein AHALO_RS11385 PF00005 ABC transporter AHALO_RS11385 PF08402 TOBE domain AHALO_RS11390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AHALO_RS11395 PF00155 Aminotransferase class I and II AHALO_RS11400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AHALO_RS11405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHALO_RS11410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AHALO_RS11410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AHALO_RS11420 PF10531 SLBB domain AHALO_RS11420 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AHALO_RS11420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AHALO_RS11425 PF00285 Citrate synthase, C-terminal domain AHALO_RS11430 PF00384 Molybdopterin oxidoreductase AHALO_RS11430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHALO_RS11430 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AHALO_RS11435 PF00146 NADH dehydrogenase AHALO_RS11440 PF12838 4Fe-4S dicluster domain AHALO_RS11445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AHALO_RS11450 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AHALO_RS11455 PF00361 Proton-conducting membrane transporter AHALO_RS11455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AHALO_RS11460 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AHALO_RS11460 PF00361 Proton-conducting membrane transporter AHALO_RS11465 PF00361 Proton-conducting membrane transporter AHALO_RS11470 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AHALO_RS11475 PF00890 FAD binding domain AHALO_RS11475 PF02910 Fumarate reductase flavoprotein C-term AHALO_RS11480 PF13085 2Fe-2S iron-sulfur cluster binding domain AHALO_RS11480 PF13183 4Fe-4S dicluster domain AHALO_RS11485 PF00350 Dynamin family AHALO_RS11490 PF00350 Dynamin family AHALO_RS11495 PF02595 Glycerate kinase family AHALO_RS11510 PF00654 Voltage gated chloride channel AHALO_RS11515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AHALO_RS11515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AHALO_RS11520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHALO_RS11520 PF00205 Thiamine pyrophosphate enzyme, central domain AHALO_RS11520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AHALO_RS11525 PF00171 Aldehyde dehydrogenase family AHALO_RS11535 PF08442 ATP-grasp domain AHALO_RS11535 PF00549 CoA-ligase AHALO_RS11540 PF00549 CoA-ligase AHALO_RS11540 PF02629 CoA binding domain AHALO_RS11555 PF00293 NUDIX domain AHALO_RS11555 PF13344 Haloacid dehalogenase-like hydrolase AHALO_RS11560 PF01810 LysE type translocator AHALO_RS11565 PF01914 MarC family integral membrane protein AHALO_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS11575 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHALO_RS11580 PF00005 ABC transporter AHALO_RS11590 PF13649 Methyltransferase domain AHALO_RS11595 PF01758 Sodium Bile acid symporter family AHALO_RS11600 PF00857 Isochorismatase family AHALO_RS11610 PF00186 Dihydrofolate reductase AHALO_RS11615 PF00303 Thymidylate synthase AHALO_RS11620 PF00270 DEAD/DEAH box helicase AHALO_RS11620 PF00570 HRDC domain AHALO_RS11620 PF16124 RecQ zinc-binding AHALO_RS11620 PF00271 Helicase conserved C-terminal domain AHALO_RS11620 PF09382 RQC domain AHALO_RS11635 PF01810 LysE type translocator AHALO_RS11650 PF00285 Citrate synthase, C-terminal domain AHALO_RS11655 PF00694 Aconitase C-terminal domain AHALO_RS11655 PF00330 Aconitase family (aconitate hydratase) AHALO_RS11660 PF04303 PrpF protein AHALO_RS11670 PF03900 Porphobilinogen deaminase, C-terminal domain AHALO_RS11670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AHALO_RS11680 PF12170 DNA polymerase III tau subunit V interacting with alpha AHALO_RS11680 PF12169 DNA polymerase III subunits gamma and tau domain III AHALO_RS11680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AHALO_RS11685 PF01177 Asp/Glu/Hydantoin racemase AHALO_RS11695 PF12282 Signal transduction histidine kinase AHALO_RS11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS11695 PF07568 Histidine kinase AHALO_RS11700 PF00072 Response regulator receiver domain AHALO_RS11705 PF07715 TonB-dependent Receptor Plug Domain AHALO_RS11710 PF11806 Domain of unknown function (DUF3327) AHALO_RS11710 PF00756 Putative esterase AHALO_RS11715 PF07497 Rho termination factor, RNA-binding domain AHALO_RS11715 PF07498 Rho termination factor, N-terminal domain AHALO_RS11715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHALO_RS11720 PF10417 C-terminal domain of 1-Cys peroxiredoxin AHALO_RS11720 PF00578 AhpC/TSA family AHALO_RS11725 PF02773 S-adenosylmethionine synthetase, C-terminal domain AHALO_RS11725 PF02772 S-adenosylmethionine synthetase, central domain AHALO_RS11725 PF00438 S-adenosylmethionine synthetase, N-terminal domain AHALO_RS11730 PF00037 4Fe-4S binding domain AHALO_RS11735 PF00334 Nucleoside diphosphate kinase AHALO_RS11745 PF01783 Ribosomal L32p protein family AHALO_RS11750 PF02504 Fatty acid synthesis protein AHALO_RS11755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AHALO_RS11755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AHALO_RS11765 PF05437 Branched-chain amino acid transport protein (AzlD) AHALO_RS11770 PF03591 AzlC protein AHALO_RS11800 PF00425 chorismate binding enzyme AHALO_RS11805 PF00202 Aminotransferase class-III AHALO_RS11815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AHALO_RS11815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHALO_RS11820 PF00224 Pyruvate kinase, barrel domain AHALO_RS11820 PF00391 PEP-utilising enzyme, mobile domain AHALO_RS11820 PF02887 Pyruvate kinase, alpha/beta domain AHALO_RS11835 PF00171 Aldehyde dehydrogenase family AHALO_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS11845 PF00072 Response regulator receiver domain AHALO_RS11845 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS11850 PF02597 ThiS family AHALO_RS11855 PF02021 Uncharacterised protein family UPF0102 AHALO_RS11865 PF00672 HAMP domain AHALO_RS11865 PF02203 Tar ligand binding domain homologue AHALO_RS11865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS11870 PF00155 Aminotransferase class I and II AHALO_RS11880 PF00484 Carbonic anhydrase AHALO_RS11890 PF04055 Radical SAM superfamily AHALO_RS11900 PF04028 Domain of unknown function (DUF374) AHALO_RS11905 PF04055 Radical SAM superfamily AHALO_RS11905 PF01938 TRAM domain AHALO_RS11905 PF00919 Uncharacterized protein family UPF0004 AHALO_RS11915 PF08529 NusA N-terminal domain AHALO_RS11915 PF13184 NusA-like KH domain AHALO_RS11920 PF01406 tRNA synthetases class I (C) catalytic domain AHALO_RS11920 PF09190 DALR domain AHALO_RS11925 PF01084 Ribosomal protein S18 AHALO_RS11930 PF00436 Single-strand binding protein family AHALO_RS11935 PF01250 Ribosomal protein S6 AHALO_RS11940 PF06144 DNA polymerase III, delta subunit AHALO_RS11945 PF02623 FliW protein AHALO_RS11950 PF17876 Cold shock domain AHALO_RS11950 PF08206 Ribonuclease B OB domain AHALO_RS11950 PF00773 RNB domain AHALO_RS11950 PF00575 S1 RNA binding domain AHALO_RS11960 PF08448 PAS fold AHALO_RS11960 PF08447 PAS fold AHALO_RS11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS11965 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AHALO_RS11965 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AHALO_RS11980 PF06965 Na+/H+ antiporter 1 AHALO_RS11990 PF13426 PAS domain AHALO_RS11990 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS11990 PF00672 HAMP domain AHALO_RS11995 PF00072 Response regulator receiver domain AHALO_RS11995 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS12000 PF03916 Polysulphide reductase, NrfD AHALO_RS12005 PF13247 4Fe-4S dicluster domain AHALO_RS12010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS12010 PF01568 Molydopterin dinucleotide binding domain AHALO_RS12010 PF00384 Molybdopterin oxidoreductase AHALO_RS12015 PF06965 Na+/H+ antiporter 1 AHALO_RS12020 PF02875 Mur ligase family, glutamate ligase domain AHALO_RS12020 PF08245 Mur ligase middle domain AHALO_RS12020 PF01225 Mur ligase family, catalytic domain AHALO_RS12030 PF00155 Aminotransferase class I and II AHALO_RS12040 PF01702 Queuine tRNA-ribosyltransferase AHALO_RS12045 PF02686 Glu-tRNAGln amidotransferase C subunit AHALO_RS12050 PF03960 ArsC family AHALO_RS12055 PF01474 Class-II DAHP synthetase family AHALO_RS12060 PF00923 Transaldolase/Fructose-6-phosphate aldolase AHALO_RS12070 PF02574 Homocysteine S-methyltransferase AHALO_RS12070 PF02219 Methylenetetrahydrofolate reductase AHALO_RS12075 PF03652 Holliday junction resolvase AHALO_RS12080 PF01648 4'-phosphopantetheinyl transferase superfamily AHALO_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component AHALO_RS12090 PF02569 Pantoate-beta-alanine ligase AHALO_RS12095 PF00072 Response regulator receiver domain AHALO_RS12100 PF04055 Radical SAM superfamily AHALO_RS12100 PF18693 TRAM domain AHALO_RS12100 PF00919 Uncharacterized protein family UPF0004 AHALO_RS12105 PF01171 PP-loop family AHALO_RS12115 PF02561 Flagellar protein FliS AHALO_RS12120 PF07195 Flagellar hook-associated protein 2 C-terminus AHALO_RS12120 PF07196 Flagellin hook IN motif AHALO_RS12120 PF02465 Flagellar hook-associated protein 2 N-terminus AHALO_RS12125 PF00460 Flagella basal body rod protein AHALO_RS12125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AHALO_RS12130 PF02107 Flagellar L-ring protein AHALO_RS12155 PF01313 Bacterial export proteins, family 3 AHALO_RS12165 PF02119 Flagellar P-ring protein AHALO_RS12170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AHALO_RS12170 PF02154 Flagellar motor switch protein FliM AHALO_RS12175 PF00543 Nitrogen regulatory protein P-II AHALO_RS12180 PF00909 Ammonium Transporter Family AHALO_RS12185 PF00543 Nitrogen regulatory protein P-II AHALO_RS12190 PF00909 Ammonium Transporter Family AHALO_RS12205 PF01909 Nucleotidyltransferase domain AHALO_RS12205 PF08335 GlnD PII-uridylyltransferase AHALO_RS12205 PF01966 HD domain AHALO_RS12210 PF00501 AMP-binding enzyme AHALO_RS12210 PF01553 Acyltransferase AHALO_RS12210 PF13193 AMP-binding enzyme C-terminal domain AHALO_RS12215 PF00916 Sulfate permease family AHALO_RS12215 PF01740 STAS domain AHALO_RS12225 PF00892 EamA-like transporter family AHALO_RS12240 PF01451 Low molecular weight phosphotyrosine protein phosphatase AHALO_RS12245 PF02040 Arsenical pump membrane protein AHALO_RS12255 PF01022 Bacterial regulatory protein, arsR family AHALO_RS12260 PF00571 CBS domain AHALO_RS12260 PF01595 Cyclin M transmembrane N-terminal domain AHALO_RS12265 PF04172 LrgB-like family AHALO_RS12270 PF03788 LrgA family AHALO_RS12275 PF13309 HTH domain AHALO_RS12275 PF08348 YheO-like PAS domain AHALO_RS12280 PF00072 Response regulator receiver domain AHALO_RS12280 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12285 PF00672 HAMP domain AHALO_RS12285 PF00989 PAS fold AHALO_RS12285 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS12290 PF00710 Asparaginase, N-terminal AHALO_RS12290 PF17763 Glutaminase/Asparaginase C-terminal domain AHALO_RS12295 PF03605 Anaerobic c4-dicarboxylate membrane transporter AHALO_RS12300 PF10415 Fumarase C C-terminus AHALO_RS12300 PF00206 Lyase AHALO_RS12305 PF13183 4Fe-4S dicluster domain AHALO_RS12305 PF13085 2Fe-2S iron-sulfur cluster binding domain AHALO_RS12310 PF02910 Fumarate reductase flavoprotein C-term AHALO_RS12310 PF00890 FAD binding domain AHALO_RS12315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AHALO_RS12320 PF00672 HAMP domain AHALO_RS12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12320 PF00989 PAS fold AHALO_RS12320 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS12325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AHALO_RS12325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AHALO_RS12330 PF01979 Amidohydrolase family AHALO_RS12335 PF01546 Peptidase family M20/M25/M40 AHALO_RS12335 PF07687 Peptidase dimerisation domain AHALO_RS12340 PF03606 C4-dicarboxylate anaerobic carrier AHALO_RS12345 PF07687 Peptidase dimerisation domain AHALO_RS12345 PF01546 Peptidase family M20/M25/M40 AHALO_RS12350 PF03606 C4-dicarboxylate anaerobic carrier AHALO_RS12355 PF00206 Lyase AHALO_RS12355 PF10415 Fumarase C C-terminus AHALO_RS12360 PF02779 Transketolase, pyrimidine binding domain AHALO_RS12360 PF00456 Transketolase, thiamine diphosphate binding domain AHALO_RS12360 PF02780 Transketolase, C-terminal domain AHALO_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12370 PF08447 PAS fold AHALO_RS12370 PF08448 PAS fold AHALO_RS12390 PF00664 ABC transporter transmembrane region AHALO_RS12390 PF00005 ABC transporter AHALO_RS12390 PF03412 Peptidase C39 family AHALO_RS12400 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS12400 PF00072 Response regulator receiver domain AHALO_RS12405 PF01594 AI-2E family transporter AHALO_RS12410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS12410 PF08269 Cache domain AHALO_RS12415 PF00989 PAS fold AHALO_RS12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12415 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS12415 PF08447 PAS fold AHALO_RS12440 PF06719 AraC-type transcriptional regulator N-terminus AHALO_RS12440 PF12833 Helix-turn-helix domain AHALO_RS12455 PF00072 Response regulator receiver domain AHALO_RS12455 PF00990 Diguanylate cyclase, GGDEF domain AHALO_RS12470 PF00920 Dehydratase family AHALO_RS12475 PF13180 PDZ domain AHALO_RS12475 PF17820 PDZ domain AHALO_RS12480 PF00072 Response regulator receiver domain AHALO_RS12480 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS12495 PF03186 CobD/Cbib protein AHALO_RS12500 PF07685 CobB/CobQ-like glutamine amidotransferase domain AHALO_RS12500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AHALO_RS12510 PF00155 Aminotransferase class I and II AHALO_RS12515 PF02654 Cobalamin-5-phosphate synthase AHALO_RS12525 PF01914 MarC family integral membrane protein AHALO_RS12530 PF02277 Phosphoribosyltransferase AHALO_RS12535 PF00072 Response regulator receiver domain AHALO_RS12535 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS12540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12540 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS12540 PF00989 PAS fold AHALO_RS12545 PF00939 Sodium:sulfate symporter transmembrane region AHALO_RS12555 PF02683 Cytochrome C biogenesis protein transmembrane region AHALO_RS12555 PF00085 Thioredoxin AHALO_RS12555 PF11412 Disulphide bond corrector protein DsbC AHALO_RS12560 PF00085 Thioredoxin AHALO_RS12580 PF02666 Phosphatidylserine decarboxylase AHALO_RS12590 PF07670 Nucleoside recognition AHALO_RS12595 PF03562 MltA specific insert domain AHALO_RS12595 PF06725 3D domain AHALO_RS12605 PF00012 Hsp70 protein AHALO_RS12610 PF01025 GrpE AHALO_RS12630 PF08447 PAS fold AHALO_RS12630 PF00989 PAS fold AHALO_RS12630 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12640 PF16868 NMT1-like family AHALO_RS12655 PF12833 Helix-turn-helix domain AHALO_RS12655 PF00072 Response regulator receiver domain AHALO_RS12660 PF08448 PAS fold AHALO_RS12660 PF08447 PAS fold AHALO_RS12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS12665 PF01416 tRNA pseudouridine synthase AHALO_RS12675 PF01478 Type IV leader peptidase family AHALO_RS12675 PF06750 Bacterial Peptidase A24 N-terminal domain AHALO_RS12680 PF01255 Putative undecaprenyl diphosphate synthase AHALO_RS12685 PF02441 Flavoprotein AHALO_RS12685 PF04127 DNA / pantothenate metabolism flavoprotein AHALO_RS12690 PF14602 Hexapeptide repeat of succinyl-transferase AHALO_RS12690 PF12804 MobA-like NTP transferase domain AHALO_RS12700 PF00271 Helicase conserved C-terminal domain AHALO_RS12700 PF00270 DEAD/DEAH box helicase AHALO_RS12700 PF08148 DSHCT (NUC185) domain AHALO_RS12705 PF05958 tRNA (Uracil-5-)-methyltransferase AHALO_RS12710 PF07196 Flagellin hook IN motif AHALO_RS12710 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS12710 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS12720 PF07196 Flagellin hook IN motif AHALO_RS12720 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS12720 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS12725 PF00700 Bacterial flagellin C-terminal helical region AHALO_RS12725 PF07196 Flagellin hook IN motif AHALO_RS12725 PF00669 Bacterial flagellin N-terminal helical region AHALO_RS12735 PF01050 Mannose-6-phosphate isomerase AHALO_RS12735 PF00483 Nucleotidyl transferase AHALO_RS12740 PF08666 SAF domain AHALO_RS12740 PF03102 NeuB family AHALO_RS12760 PF13580 SIS domain AHALO_RS12800 PF06968 Biotin and Thiamin Synthesis associated domain AHALO_RS12800 PF04055 Radical SAM superfamily AHALO_RS12810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHALO_RS12825 PF01747 ATP-sulfurylase AHALO_RS12825 PF14306 PUA-like domain AHALO_RS12830 PF00391 PEP-utilising enzyme, mobile domain AHALO_RS12830 PF02887 Pyruvate kinase, alpha/beta domain AHALO_RS12830 PF00224 Pyruvate kinase, barrel domain AHALO_RS12840 PF16363 GDP-mannose 4,6 dehydratase AHALO_RS12845 PF00456 Transketolase, thiamine diphosphate binding domain AHALO_RS12850 PF02779 Transketolase, pyrimidine binding domain AHALO_RS12850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AHALO_RS12850 PF02780 Transketolase, C-terminal domain AHALO_RS12865 PF01467 Cytidylyltransferase-like AHALO_RS12865 PF00294 pfkB family carbohydrate kinase AHALO_RS12870 PF00483 Nucleotidyl transferase AHALO_RS12875 PF00154 recA bacterial DNA recombination protein AHALO_RS12880 PF00113 Enolase, C-terminal TIM barrel domain AHALO_RS12880 PF03952 Enolase, N-terminal domain AHALO_RS12895 PF02080 TrkA-C domain AHALO_RS12895 PF00999 Sodium/hydrogen exchanger family AHALO_RS12895 PF02254 TrkA-N domain AHALO_RS12900 PF04055 Radical SAM superfamily AHALO_RS12900 PF06968 Biotin and Thiamin Synthesis associated domain AHALO_RS12910 PF13368 Topoisomerase C-terminal repeat AHALO_RS12910 PF01751 Toprim domain AHALO_RS12910 PF01131 DNA topoisomerase AHALO_RS12915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AHALO_RS12920 PF02621 Menaquinone biosynthesis AHALO_RS12930 PF00361 Proton-conducting membrane transporter AHALO_RS12935 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AHALO_RS12935 PF00361 Proton-conducting membrane transporter AHALO_RS12940 PF00361 Proton-conducting membrane transporter AHALO_RS12940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AHALO_RS12945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AHALO_RS12950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AHALO_RS12955 PF12838 4Fe-4S dicluster domain AHALO_RS12960 PF00146 NADH dehydrogenase AHALO_RS12965 PF12838 4Fe-4S dicluster domain AHALO_RS12965 PF00384 Molybdopterin oxidoreductase AHALO_RS12965 PF01568 Molydopterin dinucleotide binding domain AHALO_RS12965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHALO_RS12965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHALO_RS12980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AHALO_RS12985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AHALO_RS12990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHALO_RS12995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AHALO_RS13000 PF16450 Proteasomal ATPase OB C-terminal domain AHALO_RS13000 PF17758 Proteasomal ATPase OB N-terminal domain AHALO_RS13000 PF00004 ATPase family associated with various cellular activities (AAA) AHALO_RS13020 PF01261 Xylose isomerase-like TIM barrel AHALO_RS13025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHALO_RS13035 PF04717 Type VI secretion system, phage-baseplate injector AHALO_RS13055 PF02677 Epoxyqueuosine reductase QueH AHALO_RS13060 PF02684 Lipid-A-disaccharide synthetase AHALO_RS13065 PF07977 FabA-like domain AHALO_RS13070 PF00132 Bacterial transferase hexapeptide (six repeats) AHALO_RS13070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AHALO_RS13075 PF07724 AAA domain (Cdc48 subfamily) AHALO_RS13075 PF10431 C-terminal, D2-small domain, of ClpB protein AHALO_RS13075 PF06689 ClpX C4-type zinc finger AHALO_RS13090 PF05199 GMC oxidoreductase AHALO_RS13090 PF00732 GMC oxidoreductase AHALO_RS13100 PF00677 Lumazine binding domain AHALO_RS13105 PF02203 Tar ligand binding domain homologue AHALO_RS13105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS13105 PF00672 HAMP domain AHALO_RS13110 PF13932 GidA associated domain AHALO_RS13110 PF01134 Glucose inhibited division protein A AHALO_RS13120 PF02203 Tar ligand binding domain homologue AHALO_RS13120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS13120 PF00672 HAMP domain AHALO_RS13125 PF02028 BCCT, betaine/carnitine/choline family transporter AHALO_RS13130 PF02770 Acyl-CoA dehydrogenase, middle domain AHALO_RS13130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHALO_RS13130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHALO_RS13135 PF02515 CoA-transferase family III AHALO_RS13140 PF13193 AMP-binding enzyme C-terminal domain AHALO_RS13140 PF00501 AMP-binding enzyme AHALO_RS13145 PF01575 MaoC like domain AHALO_RS13155 PF02261 Aspartate decarboxylase AHALO_RS13170 PF07859 alpha/beta hydrolase fold AHALO_RS13175 PF00925 GTP cyclohydrolase II AHALO_RS13180 PF01575 MaoC like domain AHALO_RS13185 PF01012 Electron transfer flavoprotein domain AHALO_RS13190 PF01012 Electron transfer flavoprotein domain AHALO_RS13190 PF00766 Electron transfer flavoprotein FAD-binding domain AHALO_RS13195 PF01494 FAD binding domain AHALO_RS13210 PF13746 4Fe-4S dicluster domain AHALO_RS13210 PF12801 4Fe-4S binding domain AHALO_RS13210 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AHALO_RS13215 PF00117 Glutamine amidotransferase class-I AHALO_RS13215 PF06418 CTP synthase N-terminus AHALO_RS13220 PF02272 DHHA1 domain AHALO_RS13220 PF01368 DHH family AHALO_RS13220 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AHALO_RS13220 PF17768 RecJ OB domain AHALO_RS13250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AHALO_RS13250 PF02811 PHP domain AHALO_RS13250 PF07733 Bacterial DNA polymerase III alpha NTPase domain AHALO_RS13250 PF14579 Helix-hairpin-helix motif AHALO_RS13255 PF01975 Survival protein SurE AHALO_RS13280 PF01967 MoaC family AHALO_RS13285 PF01165 Ribosomal protein S21 AHALO_RS13290 PF00939 Sodium:sulfate symporter transmembrane region AHALO_RS13320 PF01027 Inhibitor of apoptosis-promoting Bax1 AHALO_RS13325 PF02581 Thiamine monophosphate synthase AHALO_RS13325 PF17792 ThiD2 family AHALO_RS13335 PF03840 Preprotein translocase SecG subunit AHALO_RS13345 PF01765 Ribosome recycling factor AHALO_RS13350 PF00156 Phosphoribosyl transferase domain AHALO_RS13360 PF12832 MFS_1 like family AHALO_RS13365 PF03883 Peroxide stress protein YaaA AHALO_RS13370 PF02810 SEC-C motif AHALO_RS13390 PF03167 Uracil DNA glycosylase superfamily AHALO_RS13395 PF04011 LemA family AHALO_RS13410 PF13419 Haloacid dehalogenase-like hydrolase AHALO_RS13420 PF07690 Major Facilitator Superfamily AHALO_RS13435 PF03441 FAD binding domain of DNA photolyase AHALO_RS13435 PF00875 DNA photolyase AHALO_RS13450 PF01053 Cys/Met metabolism PLP-dependent enzyme AHALO_RS13455 PF02082 Transcriptional regulator AHALO_RS13460 PF00291 Pyridoxal-phosphate dependent enzyme AHALO_RS13470 PF01507 Phosphoadenosine phosphosulfate reductase family AHALO_RS13475 PF01507 Phosphoadenosine phosphosulfate reductase family AHALO_RS13480 PF00009 Elongation factor Tu GTP binding domain AHALO_RS13490 PF02347 Glycine cleavage system P-protein AHALO_RS13495 PF02203 Tar ligand binding domain homologue AHALO_RS13495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS13495 PF00672 HAMP domain AHALO_RS13500 PF00149 Calcineurin-like phosphoesterase AHALO_RS13510 PF00011 Hsp20/alpha crystallin family AHALO_RS13515 PF00009 Elongation factor Tu GTP binding domain AHALO_RS13515 PF03144 Elongation factor Tu domain 2 AHALO_RS13515 PF00679 Elongation factor G C-terminus AHALO_RS13525 PF00005 ABC transporter AHALO_RS13525 PF02687 FtsX-like permease family AHALO_RS13525 PF12704 MacB-like periplasmic core domain AHALO_RS13550 PF00149 Calcineurin-like phosphoesterase AHALO_RS13555 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS13555 PF00072 Response regulator receiver domain AHALO_RS13560 PF00512 His Kinase A (phospho-acceptor) domain AHALO_RS13560 PF00672 HAMP domain AHALO_RS13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHALO_RS13565 PF04143 Sulphur transport AHALO_RS13570 PF01206 Sulfurtransferase TusA AHALO_RS13575 PF04960 Glutaminase AHALO_RS13605 PF00486 Transcriptional regulatory protein, C terminal AHALO_RS13605 PF00072 Response regulator receiver domain AHALO_RS13615 PF03458 UPF0126 domain AHALO_RS13620 PF08447 PAS fold AHALO_RS13620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHALO_RS13625 PF00551 Formyl transferase AHALO_RS13630 PF02075 Crossover junction endodeoxyribonuclease RuvC