locus-tag class description ALEK_RS00005 PF11638 DnaA N-terminal domain ALEK_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ALEK_RS00005 PF00308 Bacterial dnaA protein ALEK_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ALEK_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ALEK_RS00010 PF02767 DNA polymerase III beta subunit, central domain ALEK_RS00015 PF01751 Toprim domain ALEK_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ALEK_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00015 PF00204 DNA gyrase B ALEK_RS00030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS00035 PF14489 QueF-like protein ALEK_RS00055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00055 PF08447 PAS fold ALEK_RS00055 PF08448 PAS fold ALEK_RS00060 PF00849 RNA pseudouridylate synthase ALEK_RS00065 PF00206 Lyase ALEK_RS00065 PF10397 Adenylosuccinate lyase C-terminus ALEK_RS00070 PF03477 ATP cone domain ALEK_RS00070 PF02867 Ribonucleotide reductase, barrel domain ALEK_RS00070 PF00317 Ribonucleotide reductase, all-alpha domain ALEK_RS00075 PF00268 Ribonucleotide reductase, small chain ALEK_RS00095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALEK_RS00100 PF01810 LysE type translocator ALEK_RS00105 PF12833 Helix-turn-helix domain ALEK_RS00130 PF12706 Beta-lactamase superfamily domain ALEK_RS00135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ALEK_RS00135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS00140 PF00691 OmpA family ALEK_RS00160 PF01451 Low molecular weight phosphotyrosine protein phosphatase ALEK_RS00170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALEK_RS00170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALEK_RS00170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALEK_RS00170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALEK_RS00175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALEK_RS00175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALEK_RS00185 PF12833 Helix-turn-helix domain ALEK_RS00190 PF00072 Response regulator receiver domain ALEK_RS00190 PF12833 Helix-turn-helix domain ALEK_RS00195 PF08447 PAS fold ALEK_RS00195 PF00989 PAS fold ALEK_RS00195 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00200 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS00200 PF00072 Response regulator receiver domain ALEK_RS00205 PF13746 4Fe-4S dicluster domain ALEK_RS00205 PF12801 4Fe-4S binding domain ALEK_RS00205 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALEK_RS00210 PF01810 LysE type translocator ALEK_RS00230 PF00171 Aldehyde dehydrogenase family ALEK_RS00235 PF00107 Zinc-binding dehydrogenase ALEK_RS00235 PF08240 Alcohol dehydrogenase GroES-like domain ALEK_RS00240 PF01638 HxlR-like helix-turn-helix ALEK_RS00245 PF03649 Uncharacterised protein family (UPF0014) ALEK_RS00265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ALEK_RS00265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALEK_RS00270 PF02934 GatB/GatE catalytic domain ALEK_RS00270 PF02637 GatB domain ALEK_RS00275 PF00639 PPIC-type PPIASE domain ALEK_RS00275 PF09312 SurA N-terminal domain ALEK_RS00280 PF02754 Cysteine-rich domain ALEK_RS00285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS00295 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS00305 PF01575 MaoC like domain ALEK_RS00315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALEK_RS00315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALEK_RS00315 PF02770 Acyl-CoA dehydrogenase, middle domain ALEK_RS00320 PF13183 4Fe-4S dicluster domain ALEK_RS00320 PF02754 Cysteine-rich domain ALEK_RS00320 PF02665 Nitrate reductase gamma subunit ALEK_RS00325 PF01012 Electron transfer flavoprotein domain ALEK_RS00330 PF00766 Electron transfer flavoprotein FAD-binding domain ALEK_RS00330 PF01012 Electron transfer flavoprotein domain ALEK_RS00335 PF05724 Thiopurine S-methyltransferase (TPMT) ALEK_RS00340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALEK_RS00340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALEK_RS00345 PF03061 Thioesterase superfamily ALEK_RS00350 PF03061 Thioesterase superfamily ALEK_RS00355 PF01144 Coenzyme A transferase ALEK_RS00360 PF01144 Coenzyme A transferase ALEK_RS00365 PF02803 Thiolase, C-terminal domain ALEK_RS00365 PF00108 Thiolase, N-terminal domain ALEK_RS00370 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00370 PF00989 PAS fold ALEK_RS00370 PF13426 PAS domain ALEK_RS00370 PF13188 PAS domain ALEK_RS00375 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS00375 PF00072 Response regulator receiver domain ALEK_RS00380 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS00380 PF00072 Response regulator receiver domain ALEK_RS00385 PF08447 PAS fold ALEK_RS00385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00385 PF00989 PAS fold ALEK_RS00385 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS00390 PF02589 LUD domain ALEK_RS00395 PF13183 4Fe-4S dicluster domain ALEK_RS00395 PF02589 LUD domain ALEK_RS00395 PF11870 Domain of unknown function (DUF3390) ALEK_RS00400 PF02754 Cysteine-rich domain ALEK_RS00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALEK_RS00410 PF01872 RibD C-terminal domain ALEK_RS00415 PF00364 Biotin-requiring enzyme ALEK_RS00420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALEK_RS00420 PF00289 Biotin carboxylase, N-terminal domain ALEK_RS00420 PF02785 Biotin carboxylase C-terminal domain ALEK_RS00425 PF00270 DEAD/DEAH box helicase ALEK_RS00425 PF00271 Helicase conserved C-terminal domain ALEK_RS00435 PF01384 Phosphate transporter family ALEK_RS00440 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS00440 PF00072 Response regulator receiver domain ALEK_RS00450 PF13537 Glutamine amidotransferase domain ALEK_RS00450 PF00733 Asparagine synthase ALEK_RS00460 PF00881 Nitroreductase family ALEK_RS00465 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS00470 PF13085 2Fe-2S iron-sulfur cluster binding domain ALEK_RS00475 PF02910 Fumarate reductase flavoprotein C-term ALEK_RS00475 PF00890 FAD binding domain ALEK_RS00485 PF13638 PIN domain ALEK_RS00485 PF02562 PhoH-like protein ALEK_RS00495 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALEK_RS00495 PF16193 AAA C-terminal domain ALEK_RS00495 PF12002 MgsA AAA+ ATPase C terminal ALEK_RS00495 PF01661 Macro domain ALEK_RS00500 PF01479 S4 domain ALEK_RS00500 PF00849 RNA pseudouridylate synthase ALEK_RS00505 PF00571 CBS domain ALEK_RS00505 PF01380 SIS domain ALEK_RS00510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALEK_RS00510 PF00753 Metallo-beta-lactamase superfamily ALEK_RS00510 PF17770 Ribonuclease J C-terminal domain ALEK_RS00515 PF00398 Ribosomal RNA adenine dimethylase ALEK_RS00520 PF00977 Histidine biosynthesis protein ALEK_RS00535 PF04055 Radical SAM superfamily ALEK_RS00540 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALEK_RS00545 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ALEK_RS00550 PF00672 HAMP domain ALEK_RS00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS00550 PF02203 Tar ligand binding domain homologue ALEK_RS00555 PF00072 Response regulator receiver domain ALEK_RS00555 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00580 PF00873 AcrB/AcrD/AcrF family ALEK_RS00590 PF05114 Protein of unknown function (DUF692) ALEK_RS00600 PF01554 MatE ALEK_RS00605 PF01842 ACT domain ALEK_RS00605 PF00742 Homoserine dehydrogenase ALEK_RS00605 PF03447 Homoserine dehydrogenase, NAD binding domain ALEK_RS00610 PF00155 Aminotransferase class I and II ALEK_RS00620 PF00588 SpoU rRNA Methylase family ALEK_RS00620 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALEK_RS00625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS00630 PF01197 Ribosomal protein L31 ALEK_RS00650 PF17156 Gammaproteobacterial periplasmic sensor domain ALEK_RS00650 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS00665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS00665 PF02203 Tar ligand binding domain homologue ALEK_RS00665 PF00672 HAMP domain ALEK_RS00670 PF17158 Membrane-associated sensor, integral membrane domain ALEK_RS00670 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS00675 PF02222 ATP-grasp domain ALEK_RS00685 PF01678 Diaminopimelate epimerase ALEK_RS00690 PF01121 Dephospho-CoA kinase ALEK_RS00695 PF17284 Spermidine synthase tetramerisation domain ALEK_RS00700 PF00586 AIR synthase related protein, N-terminal domain ALEK_RS00700 PF02769 AIR synthase related protein, C-terminal domain ALEK_RS00705 PF02203 Tar ligand binding domain homologue ALEK_RS00705 PF00672 HAMP domain ALEK_RS00705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS00710 PF07690 Major Facilitator Superfamily ALEK_RS00715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALEK_RS00715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALEK_RS00720 PF17954 Quercetinase C-terminal cupin domain ALEK_RS00720 PF02678 Pirin ALEK_RS00730 PF03358 NADPH-dependent FMN reductase ALEK_RS00735 PF04264 YceI-like domain ALEK_RS00745 PF01810 LysE type translocator ALEK_RS00750 PF00266 Aminotransferase class-V ALEK_RS00755 PF13393 Histidyl-tRNA synthetase ALEK_RS00760 PF00709 Adenylosuccinate synthetase ALEK_RS00770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALEK_RS00770 PF00117 Glutamine amidotransferase class-I ALEK_RS00780 PF01638 HxlR-like helix-turn-helix ALEK_RS00795 PF02542 YgbB family ALEK_RS00795 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ALEK_RS00805 PF01964 Radical SAM ThiC family ALEK_RS00815 PF04205 FMN-binding domain ALEK_RS00815 PF12801 4Fe-4S binding domain ALEK_RS00820 PF01883 Iron-sulfur cluster assembly protein ALEK_RS00820 PF10609 NUBPL iron-transfer P-loop NTPase ALEK_RS00825 PF02525 Flavodoxin-like fold ALEK_RS00840 PF01502 Phosphoribosyl-AMP cyclohydrolase ALEK_RS00840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALEK_RS00855 PF01063 Amino-transferase class IV ALEK_RS00870 PF04237 YjbR ALEK_RS00875 PF00950 ABC 3 transport family ALEK_RS00880 PF00005 ABC transporter ALEK_RS00890 PF02310 B12 binding domain ALEK_RS00890 PF02574 Homocysteine S-methyltransferase ALEK_RS00890 PF00809 Pterin binding enzyme ALEK_RS00890 PF02607 B12 binding domain ALEK_RS00890 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALEK_RS00915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALEK_RS00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00920 PF08447 PAS fold ALEK_RS00920 PF08448 PAS fold ALEK_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00925 PF08447 PAS fold ALEK_RS00925 PF08448 PAS fold ALEK_RS00930 PF05538 Campylobacter major outer membrane protein ALEK_RS00935 PF00465 Iron-containing alcohol dehydrogenase ALEK_RS00940 PF06719 AraC-type transcriptional regulator N-terminus ALEK_RS00940 PF12833 Helix-turn-helix domain ALEK_RS00945 PF00465 Iron-containing alcohol dehydrogenase ALEK_RS00950 PF06719 AraC-type transcriptional regulator N-terminus ALEK_RS00950 PF12833 Helix-turn-helix domain ALEK_RS00955 PF18364 Molybdopterin oxidoreductase N-terminal domain ALEK_RS00955 PF01568 Molydopterin dinucleotide binding domain ALEK_RS00955 PF00384 Molybdopterin oxidoreductase ALEK_RS00965 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS00965 PF00072 Response regulator receiver domain ALEK_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS00975 PF08447 PAS fold ALEK_RS00975 PF08448 PAS fold ALEK_RS00990 PF04107 Glutamate-cysteine ligase family 2(GCS2) ALEK_RS01000 PF08448 PAS fold ALEK_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS01000 PF08447 PAS fold ALEK_RS01020 PF02664 S-Ribosylhomocysteinase (LuxS) ALEK_RS01030 PF12792 CSS motif domain associated with EAL ALEK_RS01030 PF00563 EAL domain ALEK_RS01035 PF05145 Transition state regulatory protein AbrB ALEK_RS01040 PF03737 Aldolase/RraA ALEK_RS01045 PF00484 Carbonic anhydrase ALEK_RS01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS01050 PF08447 PAS fold ALEK_RS01050 PF08448 PAS fold ALEK_RS01055 PF00072 Response regulator receiver domain ALEK_RS01055 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS01060 PF01970 Tripartite tricarboxylate transporter TctA family ALEK_RS01075 PF01638 HxlR-like helix-turn-helix ALEK_RS01080 PF02525 Flavodoxin-like fold ALEK_RS01085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALEK_RS01090 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ALEK_RS01090 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ALEK_RS01090 PF10371 Domain of unknown function ALEK_RS01090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALEK_RS01090 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ALEK_RS01100 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ALEK_RS01105 PF13419 Haloacid dehalogenase-like hydrolase ALEK_RS01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALEK_RS01115 PF00380 Ribosomal protein S9/S16 ALEK_RS01120 PF00572 Ribosomal protein L13 ALEK_RS01125 PF16736 Single Cache-like ALEK_RS01125 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS01125 PF00989 PAS fold ALEK_RS01130 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS01130 PF00072 Response regulator receiver domain ALEK_RS01140 PF01895 PhoU domain ALEK_RS01145 PF00005 ABC transporter ALEK_RS01150 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS01160 PF00563 EAL domain ALEK_RS01160 PF12792 CSS motif domain associated with EAL ALEK_RS01175 PF00472 RF-1 domain ALEK_RS01175 PF03462 PCRF domain ALEK_RS01180 PF01649 Ribosomal protein S20 ALEK_RS01185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALEK_RS01185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALEK_RS01185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALEK_RS01185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALEK_RS01190 PF01252 Signal peptidase (SPase) II ALEK_RS01195 PF00330 Aconitase family (aconitate hydratase) ALEK_RS01200 PF12804 MobA-like NTP transferase domain ALEK_RS01215 PF00453 Ribosomal protein L20 ALEK_RS01220 PF01632 Ribosomal protein L35 ALEK_RS01225 PF00707 Translation initiation factor IF-3, C-terminal domain ALEK_RS01225 PF05198 Translation initiation factor IF-3, N-terminal domain ALEK_RS01230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALEK_RS01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALEK_RS01230 PF03129 Anticodon binding domain ALEK_RS01270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALEK_RS01270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALEK_RS01290 PF14765 Polyketide synthase dehydratase ALEK_RS01290 PF00550 Phosphopantetheine attachment site ALEK_RS01290 PF08659 KR domain ALEK_RS01290 PF02801 Beta-ketoacyl synthase, C-terminal domain ALEK_RS01290 PF00109 Beta-ketoacyl synthase, N-terminal domain ALEK_RS01290 PF16197 Ketoacyl-synthetase C-terminal extension ALEK_RS01290 PF00668 Condensation domain ALEK_RS01290 PF13193 AMP-binding enzyme C-terminal domain ALEK_RS01290 PF00501 AMP-binding enzyme ALEK_RS01305 PF00005 ABC transporter ALEK_RS01335 PF00221 Aromatic amino acid lyase ALEK_RS01355 PF00550 Phosphopantetheine attachment site ALEK_RS01360 PF02801 Beta-ketoacyl synthase, C-terminal domain ALEK_RS01360 PF00109 Beta-ketoacyl synthase, N-terminal domain ALEK_RS01390 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ALEK_RS01390 PF13288 DXP reductoisomerase C-terminal domain ALEK_RS01390 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ALEK_RS01410 PF00814 Glycoprotease family ALEK_RS01415 PF01253 Translation initiation factor SUI1 ALEK_RS01420 PF01256 Carbohydrate kinase ALEK_RS01420 PF03853 YjeF-related protein N-terminus ALEK_RS01425 PF03091 CutA1 divalent ion tolerance protein ALEK_RS01430 PF05690 Thiazole biosynthesis protein ThiG ALEK_RS01525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALEK_RS01555 PF13180 PDZ domain ALEK_RS01555 PF03572 Peptidase family S41 ALEK_RS01560 PF01259 SAICAR synthetase ALEK_RS01565 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ALEK_RS01580 PF01553 Acyltransferase ALEK_RS01585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ALEK_RS01590 PF02416 mttA/Hcf106 family ALEK_RS01595 PF03485 Arginyl tRNA synthetase N terminal domain ALEK_RS01595 PF05746 DALR anticodon binding domain ALEK_RS01595 PF00750 tRNA synthetases class I (R) ALEK_RS01605 PF01467 Cytidylyltransferase-like ALEK_RS01610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALEK_RS01610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALEK_RS01615 PF00162 Phosphoglycerate kinase ALEK_RS01620 PF00121 Triosephosphate isomerase ALEK_RS01630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALEK_RS01630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALEK_RS01635 PF00800 Prephenate dehydratase ALEK_RS01635 PF01817 Chorismate mutase type II ALEK_RS01635 PF01842 ACT domain ALEK_RS01640 PF00155 Aminotransferase class I and II ALEK_RS01645 PF02780 Transketolase, C-terminal domain ALEK_RS01645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ALEK_RS01645 PF02779 Transketolase, pyrimidine binding domain ALEK_RS01655 PF00881 Nitroreductase family ALEK_RS01680 PF00171 Aldehyde dehydrogenase family ALEK_RS01690 PF02028 BCCT, betaine/carnitine/choline family transporter ALEK_RS01700 PF00384 Molybdopterin oxidoreductase ALEK_RS01715 PF07729 FCD domain ALEK_RS01715 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS01720 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS01730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALEK_RS01735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS01740 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS01745 PF07687 Peptidase dimerisation domain ALEK_RS01745 PF01546 Peptidase family M20/M25/M40 ALEK_RS01750 PF01321 Creatinase/Prolidase N-terminal domain ALEK_RS01750 PF00557 Metallopeptidase family M24 ALEK_RS01760 PF01212 Beta-eliminating lyase ALEK_RS01765 PF00510 Cytochrome c oxidase subunit III ALEK_RS01775 PF02545 Maf-like protein ALEK_RS01785 PF00800 Prephenate dehydratase ALEK_RS01785 PF01817 Chorismate mutase type II ALEK_RS01790 PF00180 Isocitrate/isopropylmalate dehydrogenase ALEK_RS01795 PF00106 short chain dehydrogenase ALEK_RS01815 PF09335 SNARE associated Golgi protein ALEK_RS01825 PF01966 HD domain ALEK_RS01840 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS01840 PF00072 Response regulator receiver domain ALEK_RS01845 PF07568 Histidine kinase ALEK_RS01845 PF12282 Signal transduction histidine kinase ALEK_RS01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS01855 PF02332 Methane/Phenol/Toluene Hydroxylase ALEK_RS01860 PF02406 MmoB/DmpM family ALEK_RS01865 PF04945 YHS domain ALEK_RS01865 PF02332 Methane/Phenol/Toluene Hydroxylase ALEK_RS01870 PF04663 Phenol hydroxylase conserved region ALEK_RS01875 PF00111 2Fe-2S iron-sulfur cluster binding domain ALEK_RS01875 PF00175 Oxidoreductase NAD-binding domain ALEK_RS01875 PF00970 Oxidoreductase FAD-binding domain ALEK_RS01880 PF01925 Sulfite exporter TauE/SafE ALEK_RS01885 PF00111 2Fe-2S iron-sulfur cluster binding domain ALEK_RS01890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALEK_RS01895 PF03928 Haem-degrading ALEK_RS01900 PF00171 Aldehyde dehydrogenase family ALEK_RS01910 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALEK_RS01910 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ALEK_RS01915 PF00682 HMGL-like ALEK_RS01915 PF07836 DmpG-like communication domain ALEK_RS01925 PF01361 Tautomerase enzyme ALEK_RS01930 PF00296 Luciferase-like monooxygenase ALEK_RS01935 PF00561 alpha/beta hydrolase fold ALEK_RS01955 PF00877 NlpC/P60 family ALEK_RS01960 PF00877 NlpC/P60 family ALEK_RS01980 PF01411 tRNA synthetases class II (A) ALEK_RS01980 PF02272 DHHA1 domain ALEK_RS01980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALEK_RS01985 PF00085 Thioredoxin ALEK_RS01990 PF00085 Thioredoxin ALEK_RS02000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02000 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS02000 PF00989 PAS fold ALEK_RS02005 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS02005 PF00072 Response regulator receiver domain ALEK_RS02010 PF01235 Sodium:alanine symporter family ALEK_RS02015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS02020 PF01113 Dihydrodipicolinate reductase, N-terminus ALEK_RS02020 PF05173 Dihydrodipicolinate reductase, C-terminus ALEK_RS02025 PF13537 Glutamine amidotransferase domain ALEK_RS02025 PF00156 Phosphoribosyl transferase domain ALEK_RS02030 PF04055 Radical SAM superfamily ALEK_RS02030 PF16199 Radical_SAM C-terminal domain ALEK_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS02035 PF03466 LysR substrate binding domain ALEK_RS02040 PF13361 UvrD-like helicase C-terminal domain ALEK_RS02040 PF00580 UvrD/REP helicase N-terminal domain ALEK_RS02045 PF01509 TruB family pseudouridylate synthase (N terminal domain) ALEK_RS02050 PF00288 GHMP kinases N terminal domain ALEK_RS02055 PF01668 SmpB protein ALEK_RS02060 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALEK_RS02075 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ALEK_RS02075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALEK_RS02100 PF03462 PCRF domain ALEK_RS02100 PF00472 RF-1 domain ALEK_RS02120 PF02660 Glycerol-3-phosphate acyltransferase ALEK_RS02125 PF02445 Quinolinate synthetase A protein ALEK_RS02130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALEK_RS02130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALEK_RS02145 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ALEK_RS02155 PF08544 GHMP kinases C terminal ALEK_RS02155 PF00288 GHMP kinases N terminal domain ALEK_RS02165 PF00009 Elongation factor Tu GTP binding domain ALEK_RS02165 PF11987 Translation-initiation factor 2 ALEK_RS02165 PF04760 Translation initiation factor IF-2, N-terminal region ALEK_RS02170 PF02033 Ribosome-binding factor A ALEK_RS02175 PF02576 RimP N-terminal domain ALEK_RS02180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALEK_RS02180 PF01872 RibD C-terminal domain ALEK_RS02185 PF09285 Elongation factor P, C-terminal ALEK_RS02185 PF08207 Elongation factor P (EF-P) KOW-like domain ALEK_RS02185 PF01132 Elongation factor P (EF-P) OB domain ALEK_RS02190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALEK_RS02190 PF01842 ACT domain ALEK_RS02190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALEK_RS02195 PF00575 S1 RNA binding domain ALEK_RS02200 PF02401 LytB protein ALEK_RS02205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALEK_RS02210 PF03484 tRNA synthetase B5 domain ALEK_RS02210 PF03147 Ferredoxin-fold anticodon binding domain ALEK_RS02210 PF01588 Putative tRNA binding domain ALEK_RS02210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ALEK_RS02215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ALEK_RS02215 PF01409 tRNA synthetases class II core domain (F) ALEK_RS02220 PF01230 HIT domain ALEK_RS02225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALEK_RS02230 PF00109 Beta-ketoacyl synthase, N-terminal domain ALEK_RS02230 PF02801 Beta-ketoacyl synthase, C-terminal domain ALEK_RS02235 PF00550 Phosphopantetheine attachment site ALEK_RS02245 PF04055 Radical SAM superfamily ALEK_RS02255 PF06508 Queuosine biosynthesis protein QueC ALEK_RS02260 PF03454 MoeA C-terminal region (domain IV) ALEK_RS02260 PF00994 Probable molybdopterin binding domain ALEK_RS02260 PF03453 MoeA N-terminal region (domain I and II) ALEK_RS02270 PF04452 RNA methyltransferase ALEK_RS02285 PF00033 Cytochrome b/b6/petB ALEK_RS02285 PF00032 Cytochrome b(C-terminal)/b6/petD ALEK_RS02290 PF00355 Rieske [2Fe-2S] domain ALEK_RS02290 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ALEK_RS02295 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS02300 PF00696 Amino acid kinase family ALEK_RS02305 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS02310 PF13361 UvrD-like helicase C-terminal domain ALEK_RS02310 PF00580 UvrD/REP helicase N-terminal domain ALEK_RS02320 PF00119 ATP synthase A chain ALEK_RS02325 PF13291 ACT domain ALEK_RS02325 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS02330 PF01746 tRNA (Guanine-1)-methyltransferase ALEK_RS02335 PF01245 Ribosomal protein L19 ALEK_RS02345 PF09335 SNARE associated Golgi protein ALEK_RS02355 PF00005 ABC transporter ALEK_RS02365 PF00701 Dihydrodipicolinate synthetase family ALEK_RS02370 PF00171 Aldehyde dehydrogenase family ALEK_RS02375 PF02423 Ornithine cyclodeaminase/mu-crystallin family ALEK_RS02380 PF05544 Proline racemase ALEK_RS02385 PF01266 FAD dependent oxidoreductase ALEK_RS02390 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS02405 PF00005 ABC transporter ALEK_RS02410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALEK_RS02410 PF13378 Enolase C-terminal domain-like ALEK_RS02420 PF05544 Proline racemase ALEK_RS02425 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS02425 PF07729 FCD domain ALEK_RS02450 PF02653 Branched-chain amino acid transport system / permease component ALEK_RS02455 PF02653 Branched-chain amino acid transport system / permease component ALEK_RS02455 PF11862 Domain of unknown function (DUF3382) ALEK_RS02460 PF00005 ABC transporter ALEK_RS02460 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALEK_RS02465 PF00005 ABC transporter ALEK_RS02470 PF00171 Aldehyde dehydrogenase family ALEK_RS02480 PF00672 HAMP domain ALEK_RS02480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS02480 PF02203 Tar ligand binding domain homologue ALEK_RS02495 PF13188 PAS domain ALEK_RS02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02495 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS02495 PF08448 PAS fold ALEK_RS02495 PF00072 Response regulator receiver domain ALEK_RS02515 PF03309 Type III pantothenate kinase ALEK_RS02520 PF01634 ATP phosphoribosyltransferase ALEK_RS02540 PF00691 OmpA family ALEK_RS02545 PF08448 PAS fold ALEK_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02545 PF08447 PAS fold ALEK_RS02550 PF00072 Response regulator receiver domain ALEK_RS02550 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS02570 PF03412 Peptidase C39 family ALEK_RS02570 PF00664 ABC transporter transmembrane region ALEK_RS02570 PF00005 ABC transporter ALEK_RS02580 PF00072 Response regulator receiver domain ALEK_RS02580 PF00196 Bacterial regulatory proteins, luxR family ALEK_RS02585 PF00579 tRNA synthetases class I (W and Y) ALEK_RS02600 PF02885 Glycosyl transferase family, helical bundle domain ALEK_RS02600 PF00591 Glycosyl transferase family, a/b domain ALEK_RS02625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS02625 PF10414 Sirohaem synthase dimerisation region ALEK_RS02635 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ALEK_RS02635 PF13186 Iron-sulfur cluster-binding domain ALEK_RS02635 PF04055 Radical SAM superfamily ALEK_RS02670 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALEK_RS02675 PF00034 Cytochrome c ALEK_RS02685 PF00072 Response regulator receiver domain ALEK_RS02685 PF12833 Helix-turn-helix domain ALEK_RS02690 PF08447 PAS fold ALEK_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02690 PF08448 PAS fold ALEK_RS02700 PF00593 TonB dependent receptor ALEK_RS02700 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS02705 PF13426 PAS domain ALEK_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02705 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS02705 PF00989 PAS fold ALEK_RS02705 PF13188 PAS domain ALEK_RS02715 PF12833 Helix-turn-helix domain ALEK_RS02715 PF00072 Response regulator receiver domain ALEK_RS02750 PF07670 Nucleoside recognition ALEK_RS02750 PF02421 Ferrous iron transport protein B ALEK_RS02750 PF17910 FeoB cytosolic helical domain ALEK_RS02750 PF07664 Ferrous iron transport protein B C terminus ALEK_RS02765 PF03544 Gram-negative bacterial TonB protein C-terminal ALEK_RS02770 PF02472 Biopolymer transport protein ExbD/TolR ALEK_RS02775 PF01618 MotA/TolQ/ExbB proton channel family ALEK_RS02780 PF01618 MotA/TolQ/ExbB proton channel family ALEK_RS02800 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS02805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALEK_RS02805 PF02403 Seryl-tRNA synthetase N-terminal domain ALEK_RS02820 PF08240 Alcohol dehydrogenase GroES-like domain ALEK_RS02820 PF00107 Zinc-binding dehydrogenase ALEK_RS02855 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ALEK_RS02860 PF12801 4Fe-4S binding domain ALEK_RS02860 PF00037 4Fe-4S binding domain ALEK_RS02865 PF12838 4Fe-4S dicluster domain ALEK_RS02865 PF12800 4Fe-4S binding domain ALEK_RS02870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS02870 PF00384 Molybdopterin oxidoreductase ALEK_RS02870 PF01568 Molydopterin dinucleotide binding domain ALEK_RS02870 PF10518 TAT (twin-arginine translocation) pathway signal sequence ALEK_RS02880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS02880 PF14824 Sirohaem biosynthesis protein central ALEK_RS02880 PF10414 Sirohaem synthase dimerisation region ALEK_RS02890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS02890 PF00672 HAMP domain ALEK_RS02890 PF02203 Tar ligand binding domain homologue ALEK_RS02895 PF03315 Serine dehydratase beta chain ALEK_RS02895 PF03313 Serine dehydratase alpha chain ALEK_RS02900 PF00005 ABC transporter ALEK_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS02910 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS02915 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS02920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS02920 PF14824 Sirohaem biosynthesis protein central ALEK_RS02920 PF10414 Sirohaem synthase dimerisation region ALEK_RS02935 PF02885 Glycosyl transferase family, helical bundle domain ALEK_RS02935 PF00591 Glycosyl transferase family, a/b domain ALEK_RS02940 PF04055 Radical SAM superfamily ALEK_RS02940 PF06463 Molybdenum Cofactor Synthesis C ALEK_RS02945 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS02945 PF10442 FIST C domain ALEK_RS02945 PF08495 FIST N domain ALEK_RS02945 PF00563 EAL domain ALEK_RS02955 PF02203 Tar ligand binding domain homologue ALEK_RS02955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS02955 PF00672 HAMP domain ALEK_RS02960 PF00312 Ribosomal protein S15 ALEK_RS02975 PF13380 CoA binding domain ALEK_RS02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS02980 PF08521 Two-component sensor kinase N-terminal ALEK_RS02980 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS02985 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS02985 PF00072 Response regulator receiver domain ALEK_RS02990 PF00639 PPIC-type PPIASE domain ALEK_RS02995 PF01116 Fructose-bisphosphate aldolase class-II ALEK_RS03005 PF12833 Helix-turn-helix domain ALEK_RS03010 PF02789 Cytosol aminopeptidase family, N-terminal domain ALEK_RS03010 PF00883 Cytosol aminopeptidase family, catalytic domain ALEK_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS03035 PF00005 ABC transporter ALEK_RS03055 PF08402 TOBE domain ALEK_RS03055 PF00005 ABC transporter ALEK_RS03075 PF12706 Beta-lactamase superfamily domain ALEK_RS03080 PF03070 TENA/THI-4/PQQC family ALEK_RS03085 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ALEK_RS03090 PF04055 Radical SAM superfamily ALEK_RS03090 PF13186 Iron-sulfur cluster-binding domain ALEK_RS03100 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03100 PF00072 Response regulator receiver domain ALEK_RS03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03105 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS03105 PF00072 Response regulator receiver domain ALEK_RS03105 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS03110 PF00171 Aldehyde dehydrogenase family ALEK_RS03120 PF02472 Biopolymer transport protein ExbD/TolR ALEK_RS03125 PF01618 MotA/TolQ/ExbB proton channel family ALEK_RS03135 PF00563 EAL domain ALEK_RS03135 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS03135 PF03707 Bacterial signalling protein N terminal repeat ALEK_RS03140 PF01202 Shikimate kinase ALEK_RS03145 PF00815 Histidinol dehydrogenase ALEK_RS03155 PF00348 Polyprenyl synthetase ALEK_RS03160 PF01488 Shikimate / quinate 5-dehydrogenase ALEK_RS03160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ALEK_RS03160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ALEK_RS03165 PF04073 Aminoacyl-tRNA editing domain ALEK_RS03165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALEK_RS03165 PF03129 Anticodon binding domain ALEK_RS03170 PF00924 Mechanosensitive ion channel ALEK_RS03170 PF05552 Conserved TM helix ALEK_RS03175 PF01966 HD domain ALEK_RS03175 PF01743 Poly A polymerase head domain ALEK_RS03175 PF12627 Probable RNA and SrmB- binding site of polymerase A ALEK_RS03180 PF05552 Conserved TM helix ALEK_RS03180 PF00924 Mechanosensitive ion channel ALEK_RS03190 PF02699 Preprotein translocase subunit ALEK_RS03195 PF02355 Protein export membrane protein ALEK_RS03200 PF07549 SecD/SecF GG Motif ALEK_RS03200 PF02355 Protein export membrane protein ALEK_RS03225 PF09334 tRNA synthetases class I (M) ALEK_RS03225 PF13603 Leucyl-tRNA synthetase, Domain 2 ALEK_RS03225 PF00133 tRNA synthetases class I (I, L, M and V) ALEK_RS03235 PF08245 Mur ligase middle domain ALEK_RS03240 PF01551 Peptidase family M23 ALEK_RS03240 PF04225 Opacity-associated protein A LysM-like domain ALEK_RS03250 PF00270 DEAD/DEAH box helicase ALEK_RS03250 PF00271 Helicase conserved C-terminal domain ALEK_RS03255 PF00999 Sodium/hydrogen exchanger family ALEK_RS03255 PF02254 TrkA-N domain ALEK_RS03265 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03265 PF00072 Response regulator receiver domain ALEK_RS03270 PF08448 PAS fold ALEK_RS03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03270 PF08447 PAS fold ALEK_RS03295 PF13533 Biotin-lipoyl like ALEK_RS03300 PF00873 AcrB/AcrD/AcrF family ALEK_RS03315 PF04286 Protein of unknown function (DUF445) ALEK_RS03320 PF03824 High-affinity nickel-transport protein ALEK_RS03340 PF01502 Phosphoribosyl-AMP cyclohydrolase ALEK_RS03340 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALEK_RS03345 PF04909 Amidohydrolase ALEK_RS03350 PF00072 Response regulator receiver domain ALEK_RS03350 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03355 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS03355 PF18719 ArlS sensor domain ALEK_RS03365 PF17757 UvrB interaction domain ALEK_RS03365 PF03461 TRCF domain ALEK_RS03365 PF00271 Helicase conserved C-terminal domain ALEK_RS03365 PF02559 CarD-like/TRCF domain ALEK_RS03365 PF00270 DEAD/DEAH box helicase ALEK_RS03370 PF09297 NADH pyrophosphatase zinc ribbon domain ALEK_RS03370 PF00293 NUDIX domain ALEK_RS03370 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ALEK_RS03395 PF00563 EAL domain ALEK_RS03395 PF01590 GAF domain ALEK_RS03395 PF00360 Phytochrome region ALEK_RS03395 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS03410 PF02630 SCO1/SenC ALEK_RS03420 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03420 PF00072 Response regulator receiver domain ALEK_RS03435 PF13277 YmdB-like protein ALEK_RS03455 PF01209 ubiE/COQ5 methyltransferase family ALEK_RS03460 PF13742 OB-fold nucleic acid binding domain ALEK_RS03460 PF02601 Exonuclease VII, large subunit ALEK_RS03465 PF01584 CheW-like domain ALEK_RS03470 PF00072 Response regulator receiver domain ALEK_RS03475 PF00072 Response regulator receiver domain ALEK_RS03475 PF02954 Bacterial regulatory protein, Fis family ALEK_RS03475 PF00158 Sigma-54 interaction domain ALEK_RS03480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALEK_RS03490 PF02261 Aspartate decarboxylase ALEK_RS03495 PF02575 YbaB/EbfC DNA-binding family ALEK_RS03500 PF00348 Polyprenyl synthetase ALEK_RS03505 PF00166 Chaperonin 10 Kd subunit ALEK_RS03510 PF00118 TCP-1/cpn60 chaperonin family ALEK_RS03520 PF12833 Helix-turn-helix domain ALEK_RS03520 PF12852 Cupin ALEK_RS03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03525 PF08447 PAS fold ALEK_RS03525 PF08448 PAS fold ALEK_RS03535 PF00072 Response regulator receiver domain ALEK_RS03540 PF00459 Inositol monophosphatase family ALEK_RS03550 PF01380 SIS domain ALEK_RS03555 PF00438 S-adenosylmethionine synthetase, N-terminal domain ALEK_RS03555 PF02772 S-adenosylmethionine synthetase, central domain ALEK_RS03555 PF02773 S-adenosylmethionine synthetase, C-terminal domain ALEK_RS03560 PF01039 Carboxyl transferase domain ALEK_RS03560 PF17848 Acetyl-coA carboxylase zinc finger domain ALEK_RS03565 PF02581 Thiamine monophosphate synthase ALEK_RS03570 PF02590 Predicted SPOUT methyltransferase ALEK_RS03575 PF01258 Prokaryotic dksA/traR C4-type zinc finger ALEK_RS03585 PF01207 Dihydrouridine synthase (Dus) ALEK_RS03595 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS03595 PF01434 Peptidase family M41 ALEK_RS03595 PF17862 AAA+ lid domain ALEK_RS03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03600 PF08448 PAS fold ALEK_RS03600 PF08447 PAS fold ALEK_RS03605 PF00360 Phytochrome region ALEK_RS03605 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS03605 PF01590 GAF domain ALEK_RS03605 PF00563 EAL domain ALEK_RS03610 PF00682 HMGL-like ALEK_RS03610 PF08502 LeuA allosteric (dimerisation) domain ALEK_RS03615 PF07556 Protein of unknown function (DUF1538) ALEK_RS03630 PF05190 MutS family domain IV ALEK_RS03630 PF05192 MutS domain III ALEK_RS03630 PF01624 MutS domain I ALEK_RS03630 PF05188 MutS domain II ALEK_RS03630 PF00488 MutS domain V ALEK_RS03650 PF00977 Histidine biosynthesis protein ALEK_RS03660 PF01370 NAD dependent epimerase/dehydratase family ALEK_RS03660 PF08338 Domain of unknown function (DUF1731) ALEK_RS03665 PF00117 Glutamine amidotransferase class-I ALEK_RS03675 PF11849 Domain of unknown function (DUF3369) ALEK_RS03685 PF00679 Elongation factor G C-terminus ALEK_RS03685 PF00009 Elongation factor Tu GTP binding domain ALEK_RS03685 PF03144 Elongation factor Tu domain 2 ALEK_RS03685 PF06421 GTP-binding protein LepA C-terminus ALEK_RS03690 PF00691 OmpA family ALEK_RS03690 PF13488 Glycine zipper ALEK_RS03695 PF00691 OmpA family ALEK_RS03695 PF05736 OprF membrane domain ALEK_RS03700 PF00691 OmpA family ALEK_RS03700 PF05736 OprF membrane domain ALEK_RS03705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALEK_RS03705 PF14572 Phosphoribosyl synthetase-associated domain ALEK_RS03720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ALEK_RS03725 PF00557 Metallopeptidase family M24 ALEK_RS03725 PF01321 Creatinase/Prolidase N-terminal domain ALEK_RS03730 PF01220 Dehydroquinase class II ALEK_RS03735 PF01979 Amidohydrolase family ALEK_RS03740 PF01343 Peptidase family S49 ALEK_RS03745 PF00271 Helicase conserved C-terminal domain ALEK_RS03745 PF00270 DEAD/DEAH box helicase ALEK_RS03750 PF00871 Acetokinase family ALEK_RS03755 PF01515 Phosphate acetyl/butaryl transferase ALEK_RS03760 PF00871 Acetokinase family ALEK_RS03765 PF00929 Exonuclease ALEK_RS03775 PF00474 Sodium:solute symporter family ALEK_RS03785 PF00474 Sodium:solute symporter family ALEK_RS03795 PF11490 DNA polymerase III polC-type N-terminus II ALEK_RS03795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALEK_RS03795 PF14579 Helix-hairpin-helix motif ALEK_RS03795 PF01336 OB-fold nucleic acid binding domain ALEK_RS03795 PF02811 PHP domain ALEK_RS03795 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALEK_RS03795 PF00929 Exonuclease ALEK_RS03805 PF00474 Sodium:solute symporter family ALEK_RS03815 PF00072 Response regulator receiver domain ALEK_RS03815 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03820 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03820 PF00672 HAMP domain ALEK_RS03820 PF13426 PAS domain ALEK_RS03925 PF02464 Competence-damaged protein ALEK_RS03925 PF18146 Damage-inducible protein CinA KH domain ALEK_RS03925 PF00994 Probable molybdopterin binding domain ALEK_RS03930 PF06039 Malate:quinone oxidoreductase (Mqo) ALEK_RS03935 PF00133 tRNA synthetases class I (I, L, M and V) ALEK_RS03935 PF08264 Anticodon-binding domain of tRNA ALEK_RS03950 PF02875 Mur ligase family, glutamate ligase domain ALEK_RS03950 PF08245 Mur ligase middle domain ALEK_RS03970 PF01882 Protein of unknown function DUF58 ALEK_RS03975 PF17863 AAA lid domain ALEK_RS03975 PF07726 ATPase family associated with various cellular activities (AAA) ALEK_RS03980 PF07568 Histidine kinase ALEK_RS03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS03980 PF12282 Signal transduction histidine kinase ALEK_RS03985 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS03985 PF00072 Response regulator receiver domain ALEK_RS04000 PF00318 Ribosomal protein S2 ALEK_RS04005 PF00889 Elongation factor TS ALEK_RS04010 PF00005 ABC transporter ALEK_RS04020 PF00625 Guanylate kinase ALEK_RS04025 PF08448 PAS fold ALEK_RS04025 PF00563 EAL domain ALEK_RS04025 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS04030 PF00403 Heavy-metal-associated domain ALEK_RS04045 PF00005 ABC transporter ALEK_RS04050 PF00762 Ferrochelatase ALEK_RS04065 PF01875 Memo-like protein ALEK_RS04070 PF02698 DUF218 domain ALEK_RS04075 PF00005 ABC transporter ALEK_RS04080 PF00950 ABC 3 transport family ALEK_RS04085 PF17783 CvfB-like winged helix domain ALEK_RS04085 PF13509 S1 domain ALEK_RS04090 PF08534 Redoxin ALEK_RS04100 PF00174 Oxidoreductase molybdopterin binding domain ALEK_RS04105 PF01794 Ferric reductase like transmembrane component ALEK_RS04110 PF00580 UvrD/REP helicase N-terminal domain ALEK_RS04110 PF13361 UvrD-like helicase C-terminal domain ALEK_RS04115 PF17151 Periplasmic sensor domain ALEK_RS04115 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS04120 PF08264 Anticodon-binding domain of tRNA ALEK_RS04120 PF00133 tRNA synthetases class I (I, L, M and V) ALEK_RS04120 PF10458 Valyl tRNA synthetase tRNA binding arm ALEK_RS04130 PF00873 AcrB/AcrD/AcrF family ALEK_RS04145 PF07690 Major Facilitator Superfamily ALEK_RS04150 PF01725 Ham1 family ALEK_RS04170 PF14748 Pyrroline-5-carboxylate reductase dimerisation ALEK_RS04170 PF03807 NADP oxidoreductase coenzyme F420-dependent ALEK_RS04175 PF13525 Outer membrane lipoprotein ALEK_RS04180 PF02190 ATP-dependent protease La (LON) substrate-binding domain ALEK_RS04180 PF05362 Lon protease (S16) C-terminal proteolytic domain ALEK_RS04180 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS04195 PF02311 AraC-like ligand binding domain ALEK_RS04195 PF12833 Helix-turn-helix domain ALEK_RS04200 PF01810 LysE type translocator ALEK_RS04210 PF11798 IMS family HHH motif ALEK_RS04210 PF00817 impB/mucB/samB family ALEK_RS04210 PF11799 impB/mucB/samB family C-terminal domain ALEK_RS04225 PF00672 HAMP domain ALEK_RS04225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS04225 PF02203 Tar ligand binding domain homologue ALEK_RS04230 PF00924 Mechanosensitive ion channel ALEK_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS04235 PF08447 PAS fold ALEK_RS04235 PF08448 PAS fold ALEK_RS04265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS04265 PF02743 Cache domain ALEK_RS04265 PF00672 HAMP domain ALEK_RS04270 PF00137 ATP synthase subunit C ALEK_RS04275 PF00672 HAMP domain ALEK_RS04275 PF02203 Tar ligand binding domain homologue ALEK_RS04275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS04300 PF04116 Fatty acid hydroxylase superfamily ALEK_RS04305 PF03150 Di-haem cytochrome c peroxidase ALEK_RS04320 PF18665 Tetracyclin repressor-like, C-terminal domain ALEK_RS04320 PF00440 Bacterial regulatory proteins, tetR family ALEK_RS04325 PF13533 Biotin-lipoyl like ALEK_RS04330 PF00873 AcrB/AcrD/AcrF family ALEK_RS04340 PF00375 Sodium:dicarboxylate symporter family ALEK_RS04355 PF02311 AraC-like ligand binding domain ALEK_RS04355 PF12833 Helix-turn-helix domain ALEK_RS04360 PF06965 Na+/H+ antiporter 1 ALEK_RS04385 PF03824 High-affinity nickel-transport protein ALEK_RS04400 PF01053 Cys/Met metabolism PLP-dependent enzyme ALEK_RS04405 PF01053 Cys/Met metabolism PLP-dependent enzyme ALEK_RS04430 PF04371 Porphyromonas-type peptidyl-arginine deiminase ALEK_RS04440 PF01142 tRNA pseudouridine synthase D (TruD) ALEK_RS04450 PF00085 Thioredoxin ALEK_RS04455 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ALEK_RS04465 PF00440 Bacterial regulatory proteins, tetR family ALEK_RS04465 PF16295 Tetracyclin repressor-like, C-terminal domain ALEK_RS04480 PF00873 AcrB/AcrD/AcrF family ALEK_RS04490 PF00892 EamA-like transporter family ALEK_RS04500 PF01894 Uncharacterised protein family UPF0047 ALEK_RS04530 PF03737 Aldolase/RraA ALEK_RS04535 PF13726 Na+-H+ antiporter family ALEK_RS04535 PF03553 Na+/H+ antiporter family ALEK_RS04545 PF08495 FIST N domain ALEK_RS04545 PF00563 EAL domain ALEK_RS04545 PF10442 FIST C domain ALEK_RS04545 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS04550 PF01883 Iron-sulfur cluster assembly protein ALEK_RS04555 PF02657 Fe-S metabolism associated domain ALEK_RS04560 PF00266 Aminotransferase class-V ALEK_RS04570 PF00005 ABC transporter ALEK_RS04575 PF01458 Uncharacterized protein family (UPF0051) ALEK_RS04580 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS04590 PF00266 Aminotransferase class-V ALEK_RS04595 PF04324 BFD-like [2Fe-2S] binding domain ALEK_RS04595 PF01106 NifU-like domain ALEK_RS04595 PF01592 NifU-like N terminal domain ALEK_RS04600 PF01925 Sulfite exporter TauE/SafE ALEK_RS04620 PF00206 Lyase ALEK_RS04620 PF14698 Argininosuccinate lyase C-terminal ALEK_RS04625 PF00072 Response regulator receiver domain ALEK_RS04625 PF01584 CheW-like domain ALEK_RS04630 PF00899 ThiF family ALEK_RS04635 PF01272 Transcription elongation factor, GreA/GreB, C-term ALEK_RS04635 PF03449 Transcription elongation factor, N-terminal ALEK_RS04640 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALEK_RS04640 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALEK_RS04655 PF02151 UvrB/uvrC motif ALEK_RS04655 PF00271 Helicase conserved C-terminal domain ALEK_RS04655 PF17757 UvrB interaction domain ALEK_RS04655 PF12344 Ultra-violet resistance protein B ALEK_RS04655 PF04851 Type III restriction enzyme, res subunit ALEK_RS04660 PF00730 HhH-GPD superfamily base excision DNA repair protein ALEK_RS04660 PF10576 Iron-sulfur binding domain of endonuclease III ALEK_RS04660 PF00633 Helix-hairpin-helix motif ALEK_RS04665 PF00753 Metallo-beta-lactamase superfamily ALEK_RS04665 PF12706 Beta-lactamase superfamily domain ALEK_RS04685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ALEK_RS04685 PF01266 FAD dependent oxidoreductase ALEK_RS04705 PF02502 Ribose/Galactose Isomerase ALEK_RS04710 PF10502 Signal peptidase, peptidase S26 ALEK_RS04715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALEK_RS04715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALEK_RS04720 PF14693 Ribosomal protein TL5, C-terminal domain ALEK_RS04720 PF01386 Ribosomal L25p family ALEK_RS04725 PF01195 Peptidyl-tRNA hydrolase ALEK_RS04740 PF01520 N-acetylmuramoyl-L-alanine amidase ALEK_RS04750 PF01479 S4 domain ALEK_RS04750 PF00579 tRNA synthetases class I (W and Y) ALEK_RS04755 PF13291 ACT domain ALEK_RS04755 PF02824 TGS domain ALEK_RS04755 PF04607 Region found in RelA / SpoT proteins ALEK_RS04760 PF01192 RNA polymerase Rpb6 ALEK_RS04765 PF00696 Amino acid kinase family ALEK_RS04775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ALEK_RS04780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ALEK_RS04785 PF04715 Anthranilate synthase component I, N terminal region ALEK_RS04785 PF00425 chorismate binding enzyme ALEK_RS04795 PF00464 Serine hydroxymethyltransferase ALEK_RS04800 PF01336 OB-fold nucleic acid binding domain ALEK_RS04800 PF00152 tRNA synthetases class II (D, K and N) ALEK_RS04810 PF04551 GcpE protein ALEK_RS04815 PF00772 DnaB-like helicase N terminal domain ALEK_RS04815 PF03796 DnaB-like helicase C terminal domain ALEK_RS04825 PF14743 DNA ligase OB-like domain ALEK_RS04825 PF01068 ATP dependent DNA ligase domain ALEK_RS04850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALEK_RS04850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALEK_RS04850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALEK_RS04855 PF00483 Nucleotidyl transferase ALEK_RS04860 PF00342 Phosphoglucose isomerase ALEK_RS04865 PF02350 UDP-N-acetylglucosamine 2-epimerase ALEK_RS04870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALEK_RS04870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALEK_RS04870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALEK_RS04875 PF01370 NAD dependent epimerase/dehydratase family ALEK_RS04880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALEK_RS04880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALEK_RS04880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALEK_RS04885 PF08666 SAF domain ALEK_RS04885 PF03102 NeuB family ALEK_RS04890 PF02350 UDP-N-acetylglucosamine 2-epimerase ALEK_RS04895 PF00977 Histidine biosynthesis protein ALEK_RS04900 PF00117 Glutamine amidotransferase class-I ALEK_RS04910 PF02348 Cytidylyltransferase ALEK_RS04925 PF08666 SAF domain ALEK_RS04925 PF03102 NeuB family ALEK_RS04930 PF02350 UDP-N-acetylglucosamine 2-epimerase ALEK_RS04935 PF13472 GDSL-like Lipase/Acylhydrolase family ALEK_RS04935 PF02348 Cytidylyltransferase ALEK_RS04960 PF00294 pfkB family carbohydrate kinase ALEK_RS04970 PF08544 GHMP kinases C terminal ALEK_RS04970 PF00288 GHMP kinases N terminal domain ALEK_RS04975 PF13580 SIS domain ALEK_RS04980 PF00483 Nucleotidyl transferase ALEK_RS04985 PF08645 Polynucleotide kinase 3 phosphatase ALEK_RS05010 PF08240 Alcohol dehydrogenase GroES-like domain ALEK_RS05010 PF00107 Zinc-binding dehydrogenase ALEK_RS05025 PF00953 Glycosyl transferase family 4 ALEK_RS05035 PF01370 NAD dependent epimerase/dehydratase family ALEK_RS05050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALEK_RS05050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALEK_RS05050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALEK_RS05050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALEK_RS05055 PF16363 GDP-mannose 4,6 dehydratase ALEK_RS05060 PF00156 Phosphoribosyl transferase domain ALEK_RS05065 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS05075 PF02789 Cytosol aminopeptidase family, N-terminal domain ALEK_RS05075 PF00883 Cytosol aminopeptidase family, catalytic domain ALEK_RS05080 PF10518 TAT (twin-arginine translocation) pathway signal sequence ALEK_RS05080 PF01568 Molydopterin dinucleotide binding domain ALEK_RS05080 PF00384 Molybdopterin oxidoreductase ALEK_RS05080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS05085 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ALEK_RS05090 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ALEK_RS05095 PF00072 Response regulator receiver domain ALEK_RS05095 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS05100 PF02384 N-6 DNA Methylase ALEK_RS05105 PF01420 Type I restriction modification DNA specificity domain ALEK_RS05130 PF18766 SWI2/SNF2 ATPase ALEK_RS05130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALEK_RS05130 PF11867 Domain of unknown function (DUF3387) ALEK_RS05135 PF13195 Protein of unknown function (DUF4011) ALEK_RS05135 PF13087 AAA domain ALEK_RS05135 PF13086 AAA domain ALEK_RS05135 PF13195 Protein of unknown function (DUF4011) ALEK_RS05135 PF13087 AAA domain ALEK_RS05135 PF13086 AAA domain ALEK_RS05140 PF02796 Helix-turn-helix domain of resolvase ALEK_RS05140 PF00239 Resolvase, N terminal domain ALEK_RS05205 PF01926 50S ribosome-binding GTPase ALEK_RS05205 PF06071 Protein of unknown function (DUF933) ALEK_RS05230 PF06865 Pyrimidine/purine nucleoside phosphorylase ALEK_RS05245 PF02769 AIR synthase related protein, C-terminal domain ALEK_RS05245 PF00586 AIR synthase related protein, N-terminal domain ALEK_RS05250 PF01142 tRNA pseudouridine synthase D (TruD) ALEK_RS05260 PF02203 Tar ligand binding domain homologue ALEK_RS05260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS05260 PF00672 HAMP domain ALEK_RS05265 PF01330 RuvA N terminal domain ALEK_RS05265 PF07499 RuvA, C-terminal domain ALEK_RS05270 PF01820 D-ala D-ala ligase N-terminus ALEK_RS05270 PF07478 D-ala D-ala ligase C-terminus ALEK_RS05280 PF08245 Mur ligase middle domain ALEK_RS05285 PF01230 HIT domain ALEK_RS05315 PF02954 Bacterial regulatory protein, Fis family ALEK_RS05315 PF00158 Sigma-54 interaction domain ALEK_RS05325 PF08360 QacR-like protein, C-terminal region ALEK_RS05325 PF00440 Bacterial regulatory proteins, tetR family ALEK_RS05340 PF02311 AraC-like ligand binding domain ALEK_RS05340 PF12833 Helix-turn-helix domain ALEK_RS05350 PF00338 Ribosomal protein S10p/S20e ALEK_RS05355 PF00297 Ribosomal protein L3 ALEK_RS05360 PF00573 Ribosomal protein L4/L1 family ALEK_RS05365 PF00276 Ribosomal protein L23 ALEK_RS05370 PF03947 Ribosomal Proteins L2, C-terminal domain ALEK_RS05370 PF00181 Ribosomal Proteins L2, RNA binding domain ALEK_RS05375 PF00203 Ribosomal protein S19 ALEK_RS05380 PF00237 Ribosomal protein L22p/L17e ALEK_RS05385 PF07650 KH domain ALEK_RS05385 PF00189 Ribosomal protein S3, C-terminal domain ALEK_RS05390 PF00252 Ribosomal protein L16p/L10e ALEK_RS05395 PF00831 Ribosomal L29 protein ALEK_RS05400 PF00366 Ribosomal protein S17 ALEK_RS05405 PF00238 Ribosomal protein L14p/L23e ALEK_RS05410 PF00467 KOW motif ALEK_RS05410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ALEK_RS05415 PF00281 Ribosomal protein L5 ALEK_RS05415 PF00673 ribosomal L5P family C-terminus ALEK_RS05420 PF00253 Ribosomal protein S14p/S29e ALEK_RS05425 PF00410 Ribosomal protein S8 ALEK_RS05430 PF00347 Ribosomal protein L6 ALEK_RS05435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ALEK_RS05440 PF03719 Ribosomal protein S5, C-terminal domain ALEK_RS05440 PF00333 Ribosomal protein S5, N-terminal domain ALEK_RS05445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ALEK_RS05450 PF00344 SecY translocase ALEK_RS05455 PF00557 Metallopeptidase family M24 ALEK_RS05460 PF01176 Translation initiation factor 1A / IF-1 ALEK_RS05470 PF03167 Uracil DNA glycosylase superfamily ALEK_RS05480 PF02938 GAD domain ALEK_RS05480 PF00152 tRNA synthetases class II (D, K and N) ALEK_RS05480 PF01336 OB-fold nucleic acid binding domain ALEK_RS05495 PF08497 Radical SAM N-terminal ALEK_RS05495 PF04055 Radical SAM superfamily ALEK_RS05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS05505 PF00672 HAMP domain ALEK_RS05505 PF02203 Tar ligand binding domain homologue ALEK_RS05520 PF01168 Alanine racemase, N-terminal domain ALEK_RS05520 PF00842 Alanine racemase, C-terminal domain ALEK_RS05525 PF02151 UvrB/uvrC motif ALEK_RS05525 PF01541 GIY-YIG catalytic domain ALEK_RS05525 PF08459 UvrC Helix-hairpin-helix N-terminal ALEK_RS05550 PF00255 Glutathione peroxidase ALEK_RS05555 PF17158 Membrane-associated sensor, integral membrane domain ALEK_RS05555 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS05575 PF00684 DnaJ central domain ALEK_RS05575 PF01556 DnaJ C terminal domain ALEK_RS05575 PF00226 DnaJ domain ALEK_RS05580 PF02652 L-lactate permease ALEK_RS05590 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS05590 PF00989 PAS fold ALEK_RS05600 PF00226 DnaJ domain ALEK_RS05600 PF01556 DnaJ C terminal domain ALEK_RS05600 PF00684 DnaJ central domain ALEK_RS05625 PF17200 Single Cache domain 2 ALEK_RS05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS05625 PF00672 HAMP domain ALEK_RS05625 PF17200 Single Cache domain 2 ALEK_RS05625 PF00672 HAMP domain ALEK_RS05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS05640 PF00149 Calcineurin-like phosphoesterase ALEK_RS05645 PF00933 Glycosyl hydrolase family 3 N terminal domain ALEK_RS05645 PF01915 Glycosyl hydrolase family 3 C-terminal domain ALEK_RS05655 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS05655 PF07694 5TMR of 5TMR-LYT ALEK_RS05675 PF03372 Endonuclease/Exonuclease/phosphatase family ALEK_RS05680 PF00440 Bacterial regulatory proteins, tetR family ALEK_RS05710 PF17932 Tetracyclin repressor-like, C-terminal domain ALEK_RS05710 PF00440 Bacterial regulatory proteins, tetR family ALEK_RS05715 PF07690 Major Facilitator Superfamily ALEK_RS05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS05735 PF08447 PAS fold ALEK_RS05735 PF08448 PAS fold ALEK_RS05740 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS05740 PF00072 Response regulator receiver domain ALEK_RS05785 PF01266 FAD dependent oxidoreductase ALEK_RS05790 PF00464 Serine hydroxymethyltransferase ALEK_RS05795 PF02805 Metal binding domain of Ada ALEK_RS05795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALEK_RS05795 PF12833 Helix-turn-helix domain ALEK_RS05795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALEK_RS05805 PF01235 Sodium:alanine symporter family ALEK_RS05815 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS05815 PF02743 Cache domain ALEK_RS05820 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS05820 PF00072 Response regulator receiver domain ALEK_RS05825 PF00206 Lyase ALEK_RS05825 PF10415 Fumarase C C-terminus ALEK_RS05835 PF00210 Ferritin-like domain ALEK_RS05840 PF00593 TonB dependent receptor ALEK_RS05840 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS05845 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS05845 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS05855 PF03707 Bacterial signalling protein N terminal repeat ALEK_RS05855 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS05855 PF00563 EAL domain ALEK_RS05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS05860 PF08448 PAS fold ALEK_RS05860 PF08447 PAS fold ALEK_RS05865 PF02833 DHHA2 domain ALEK_RS05865 PF01368 DHH family ALEK_RS05875 PF08713 DNA alkylation repair enzyme ALEK_RS05880 PF04073 Aminoacyl-tRNA editing domain ALEK_RS05885 PF05088 Bacterial NAD-glutamate dehydrogenase ALEK_RS05895 PF00072 Response regulator receiver domain ALEK_RS05895 PF03861 ANTAR domain ALEK_RS05910 PF04403 Paraquat-inducible protein A ALEK_RS05915 PF02470 MlaD protein ALEK_RS05920 PF02028 BCCT, betaine/carnitine/choline family transporter ALEK_RS05925 PF00571 CBS domain ALEK_RS05925 PF00005 ABC transporter ALEK_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS05935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALEK_RS05945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALEK_RS05960 PF08460 Bacterial SH3 domain ALEK_RS05960 PF01551 Peptidase family M23 ALEK_RS05970 PF13460 NAD(P)H-binding ALEK_RS05970 PF11066 Protein of unknown function (DUF2867) ALEK_RS05985 PF00183 Hsp90 protein ALEK_RS06010 PF03466 LysR substrate binding domain ALEK_RS06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS06030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06030 PF02203 Tar ligand binding domain homologue ALEK_RS06030 PF00672 HAMP domain ALEK_RS06035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ALEK_RS06035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALEK_RS06045 PF00672 HAMP domain ALEK_RS06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06045 PF02203 Tar ligand binding domain homologue ALEK_RS06075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALEK_RS06075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALEK_RS06090 PF00873 AcrB/AcrD/AcrF family ALEK_RS06095 PF00072 Response regulator receiver domain ALEK_RS06095 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS06100 PF08448 PAS fold ALEK_RS06100 PF08447 PAS fold ALEK_RS06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06115 PF00672 HAMP domain ALEK_RS06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06115 PF02203 Tar ligand binding domain homologue ALEK_RS06130 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS06130 PF00072 Response regulator receiver domain ALEK_RS06140 PF06965 Na+/H+ antiporter 1 ALEK_RS06150 PF02254 TrkA-N domain ALEK_RS06150 PF00999 Sodium/hydrogen exchanger family ALEK_RS06155 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ALEK_RS06155 PF00355 Rieske [2Fe-2S] domain ALEK_RS06165 PF00919 Uncharacterized protein family UPF0004 ALEK_RS06165 PF18693 TRAM domain ALEK_RS06165 PF04055 Radical SAM superfamily ALEK_RS06190 PF03641 Possible lysine decarboxylase ALEK_RS06195 PF08269 Cache domain ALEK_RS06195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06200 PF01966 HD domain ALEK_RS06205 PF00072 Response regulator receiver domain ALEK_RS06205 PF12833 Helix-turn-helix domain ALEK_RS06210 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS06220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS06230 PF03746 LamB/YcsF family ALEK_RS06240 PF02626 Carboxyltransferase domain, subdomain A and B ALEK_RS06250 PF08495 FIST N domain ALEK_RS06250 PF00563 EAL domain ALEK_RS06250 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06250 PF10442 FIST C domain ALEK_RS06265 PF00672 HAMP domain ALEK_RS06265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06265 PF02203 Tar ligand binding domain homologue ALEK_RS06270 PF03880 DbpA RNA binding domain ALEK_RS06270 PF00271 Helicase conserved C-terminal domain ALEK_RS06270 PF00270 DEAD/DEAH box helicase ALEK_RS06275 PF03707 Bacterial signalling protein N terminal repeat ALEK_RS06275 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06275 PF00563 EAL domain ALEK_RS06280 PF05698 Bacterial trigger factor protein (TF) C-terminus ALEK_RS06290 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS06290 PF00593 TonB dependent receptor ALEK_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS06300 PF00005 ABC transporter ALEK_RS06325 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS06325 PF00593 TonB dependent receptor ALEK_RS06330 PF00072 Response regulator receiver domain ALEK_RS06335 PF07568 Histidine kinase ALEK_RS06335 PF12282 Signal transduction histidine kinase ALEK_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06340 PF00925 GTP cyclohydrolase II ALEK_RS06350 PF02203 Tar ligand binding domain homologue ALEK_RS06350 PF00672 HAMP domain ALEK_RS06350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS06355 PF01243 Pyridoxamine 5'-phosphate oxidase ALEK_RS06355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ALEK_RS06360 PF10442 FIST C domain ALEK_RS06360 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06360 PF00563 EAL domain ALEK_RS06360 PF08495 FIST N domain ALEK_RS06370 PF02562 PhoH-like protein ALEK_RS06370 PF13638 PIN domain ALEK_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06375 PF08447 PAS fold ALEK_RS06375 PF08448 PAS fold ALEK_RS06380 PF00072 Response regulator receiver domain ALEK_RS06390 PF08495 FIST N domain ALEK_RS06390 PF00563 EAL domain ALEK_RS06390 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06390 PF10442 FIST C domain ALEK_RS06395 PF00072 Response regulator receiver domain ALEK_RS06395 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS06400 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06400 PF13426 PAS domain ALEK_RS06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06400 PF00672 HAMP domain ALEK_RS06405 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS06410 PF01467 Cytidylyltransferase-like ALEK_RS06415 PF00072 Response regulator receiver domain ALEK_RS06415 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06420 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ALEK_RS06420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALEK_RS06430 PF08447 PAS fold ALEK_RS06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06430 PF08448 PAS fold ALEK_RS06435 PF00072 Response regulator receiver domain ALEK_RS06435 PF01627 Hpt domain ALEK_RS06435 PF00672 HAMP domain ALEK_RS06435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALEK_RS06435 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06440 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06440 PF00672 HAMP domain ALEK_RS06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06440 PF01627 Hpt domain ALEK_RS06440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALEK_RS06440 PF00072 Response regulator receiver domain ALEK_RS06445 PF00072 Response regulator receiver domain ALEK_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS06490 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS06500 PF08448 PAS fold ALEK_RS06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06500 PF08447 PAS fold ALEK_RS06505 PF00009 Elongation factor Tu GTP binding domain ALEK_RS06505 PF03144 Elongation factor Tu domain 2 ALEK_RS06505 PF09106 Elongation factor SelB, winged helix ALEK_RS06505 PF09107 Elongation factor SelB, winged helix ALEK_RS06505 PF09105 Elongation factor SelB, winged helix ALEK_RS06510 PF03841 L-seryl-tRNA selenium transferase ALEK_RS06530 PF00586 AIR synthase related protein, N-terminal domain ALEK_RS06530 PF02769 AIR synthase related protein, C-terminal domain ALEK_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06535 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06535 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS06540 PF11849 Domain of unknown function (DUF3369) ALEK_RS06545 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS06545 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06550 PF11849 Domain of unknown function (DUF3369) ALEK_RS06560 PF00005 ABC transporter ALEK_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS06575 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS06575 PF00072 Response regulator receiver domain ALEK_RS06580 PF00149 Calcineurin-like phosphoesterase ALEK_RS06585 PF00158 Sigma-54 interaction domain ALEK_RS06585 PF00072 Response regulator receiver domain ALEK_RS06590 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS06615 PF00384 Molybdopterin oxidoreductase ALEK_RS06615 PF01568 Molydopterin dinucleotide binding domain ALEK_RS06620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS06620 PF00384 Molybdopterin oxidoreductase ALEK_RS06620 PF01568 Molydopterin dinucleotide binding domain ALEK_RS06625 PF13247 4Fe-4S dicluster domain ALEK_RS06635 PF02634 FdhD/NarQ family ALEK_RS06655 PF00994 Probable molybdopterin binding domain ALEK_RS06655 PF03454 MoeA C-terminal region (domain IV) ALEK_RS06655 PF03453 MoeA N-terminal region (domain I and II) ALEK_RS06660 PF12849 PBP superfamily domain ALEK_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS06670 PF00005 ABC transporter ALEK_RS06675 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ ALEK_RS06680 PF04221 RelB antitoxin ALEK_RS06700 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ALEK_RS06720 PF08448 PAS fold ALEK_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06720 PF08447 PAS fold ALEK_RS06725 PF00849 RNA pseudouridylate synthase ALEK_RS06735 PF00563 EAL domain ALEK_RS06735 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS06735 PF03707 Bacterial signalling protein N terminal repeat ALEK_RS06740 PF11412 Disulphide bond corrector protein DsbC ALEK_RS06740 PF02683 Cytochrome C biogenesis protein transmembrane region ALEK_RS06740 PF13098 Thioredoxin-like domain ALEK_RS06805 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS06805 PF00155 Aminotransferase class I and II ALEK_RS06840 PF01042 Endoribonuclease L-PSP ALEK_RS06845 PF01266 FAD dependent oxidoreductase ALEK_RS06850 PF01235 Sodium:alanine symporter family ALEK_RS06855 PF00842 Alanine racemase, C-terminal domain ALEK_RS06855 PF01168 Alanine racemase, N-terminal domain ALEK_RS06860 PF01810 LysE type translocator ALEK_RS06865 PF12833 Helix-turn-helix domain ALEK_RS06870 PF07836 DmpG-like communication domain ALEK_RS06870 PF00682 HMGL-like ALEK_RS06885 PF00072 Response regulator receiver domain ALEK_RS06895 PF00075 RNase H ALEK_RS06910 PF01553 Acyltransferase ALEK_RS06915 PF08443 RimK-like ATP-grasp domain ALEK_RS06915 PF18030 RimK PreATP-grasp domain ALEK_RS06920 PF00313 'Cold-shock' DNA-binding domain ALEK_RS06930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ALEK_RS06930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALEK_RS06960 PF00258 Flavodoxin ALEK_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS06965 PF00072 Response regulator receiver domain ALEK_RS06970 PF00072 Response regulator receiver domain ALEK_RS06970 PF01339 CheB methylesterase ALEK_RS06980 PF01739 CheR methyltransferase, SAM binding domain ALEK_RS06980 PF03705 CheR methyltransferase, all-alpha domain ALEK_RS06985 PF01584 CheW-like domain ALEK_RS06985 PF00072 Response regulator receiver domain ALEK_RS06990 PF01584 CheW-like domain ALEK_RS06995 PF02203 Tar ligand binding domain homologue ALEK_RS06995 PF00672 HAMP domain ALEK_RS06995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS07000 PF08447 PAS fold ALEK_RS07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS07005 PF01584 CheW-like domain ALEK_RS07005 PF02895 Signal transducing histidine kinase, homodimeric domain ALEK_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS07005 PF01627 Hpt domain ALEK_RS07005 PF07194 P2 response regulator binding domain ALEK_RS07015 PF00072 Response regulator receiver domain ALEK_RS07020 PF00072 Response regulator receiver domain ALEK_RS07020 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS07030 PF08448 PAS fold ALEK_RS07030 PF08447 PAS fold ALEK_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS07035 PF00072 Response regulator receiver domain ALEK_RS07040 PF10442 FIST C domain ALEK_RS07040 PF08495 FIST N domain ALEK_RS07040 PF00563 EAL domain ALEK_RS07040 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS07055 PF00158 Sigma-54 interaction domain ALEK_RS07055 PF00072 Response regulator receiver domain ALEK_RS07055 PF02954 Bacterial regulatory protein, Fis family ALEK_RS07100 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS07110 PF00691 OmpA family ALEK_RS07115 PF01965 DJ-1/PfpI family ALEK_RS07120 PF01614 Bacterial transcriptional regulator ALEK_RS07120 PF09339 IclR helix-turn-helix domain ALEK_RS07135 PF03737 Aldolase/RraA ALEK_RS07155 PF02600 Disulfide bond formation protein DsbB ALEK_RS07160 PF06965 Na+/H+ antiporter 1 ALEK_RS07160 PF13462 Thioredoxin ALEK_RS07185 PF00155 Aminotransferase class I and II ALEK_RS07195 PF13419 Haloacid dehalogenase-like hydrolase ALEK_RS07205 PF08447 PAS fold ALEK_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS07205 PF08448 PAS fold ALEK_RS07220 PF04333 MlaA lipoprotein ALEK_RS07225 PF01551 Peptidase family M23 ALEK_RS07230 PF05362 Lon protease (S16) C-terminal proteolytic domain ALEK_RS07230 PF13654 AAA domain ALEK_RS07235 PF00206 Lyase ALEK_RS07235 PF10415 Fumarase C C-terminus ALEK_RS07240 PF01709 Transcriptional regulator ALEK_RS07285 PF02424 ApbE family ALEK_RS07290 PF01435 Peptidase family M48 ALEK_RS07290 PF13181 Tetratricopeptide repeat ALEK_RS07300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALEK_RS07300 PF02770 Acyl-CoA dehydrogenase, middle domain ALEK_RS07300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALEK_RS07300 PF09317 Domain of unknown function (DUF1974) ALEK_RS07305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALEK_RS07305 PF00378 Enoyl-CoA hydratase/isomerase ALEK_RS07305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALEK_RS07310 PF00108 Thiolase, N-terminal domain ALEK_RS07310 PF02803 Thiolase, C-terminal domain ALEK_RS07315 PF00501 AMP-binding enzyme ALEK_RS07320 PF00892 EamA-like transporter family ALEK_RS07330 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALEK_RS07330 PF00588 SpoU rRNA Methylase family ALEK_RS07335 PF01327 Polypeptide deformylase ALEK_RS07345 PF10415 Fumarase C C-terminus ALEK_RS07345 PF00206 Lyase ALEK_RS07360 PF00171 Aldehyde dehydrogenase family ALEK_RS07385 PF11791 Aconitate B N-terminal domain ALEK_RS07385 PF06434 Aconitate hydratase 2 N-terminus ALEK_RS07385 PF00330 Aconitase family (aconitate hydratase) ALEK_RS07395 PF00849 RNA pseudouridylate synthase ALEK_RS07410 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ALEK_RS07410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALEK_RS07420 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ALEK_RS07420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALEK_RS07420 PF10518 TAT (twin-arginine translocation) pathway signal sequence ALEK_RS07425 PF00374 Nickel-dependent hydrogenase ALEK_RS07430 PF01292 Prokaryotic cytochrome b561 ALEK_RS07435 PF01750 Hydrogenase maturation protease ALEK_RS07455 PF14864 Alkyl sulfatase C-terminal ALEK_RS07455 PF14863 Alkyl sulfatase dimerisation ALEK_RS07455 PF00753 Metallo-beta-lactamase superfamily ALEK_RS07460 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ALEK_RS07460 PF10518 TAT (twin-arginine translocation) pathway signal sequence ALEK_RS07460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALEK_RS07465 PF00374 Nickel-dependent hydrogenase ALEK_RS07470 PF01292 Prokaryotic cytochrome b561 ALEK_RS07475 PF01750 Hydrogenase maturation protease ALEK_RS07485 PF00708 Acylphosphatase ALEK_RS07485 PF17788 HypF Kae1-like domain ALEK_RS07485 PF01300 Telomere recombination ALEK_RS07485 PF07503 HypF finger ALEK_RS07495 PF00881 Nitroreductase family ALEK_RS07530 PF00209 Sodium:neurotransmitter symporter family ALEK_RS07535 PF03776 Septum formation topological specificity factor MinE ALEK_RS07540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALEK_RS07545 PF03775 Septum formation inhibitor MinC, C-terminal domain ALEK_RS07550 PF00270 DEAD/DEAH box helicase ALEK_RS07550 PF00271 Helicase conserved C-terminal domain ALEK_RS07565 PF03150 Di-haem cytochrome c peroxidase ALEK_RS07565 PF00034 Cytochrome c ALEK_RS07570 PF00106 short chain dehydrogenase ALEK_RS07580 PF00106 short chain dehydrogenase ALEK_RS07590 PF12823 Domain of unknown function (DUF3817) ALEK_RS07600 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS07600 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS07615 PF01625 Peptide methionine sulfoxide reductase ALEK_RS07640 PF02203 Tar ligand binding domain homologue ALEK_RS07640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS07640 PF00672 HAMP domain ALEK_RS07645 PF02492 CobW/HypB/UreG, nucleotide-binding domain ALEK_RS07650 PF01455 HupF/HypC family ALEK_RS07655 PF01924 Hydrogenase formation hypA family ALEK_RS07660 PF02769 AIR synthase related protein, C-terminal domain ALEK_RS07660 PF00586 AIR synthase related protein, N-terminal domain ALEK_RS07665 PF02911 Formyl transferase, C-terminal domain ALEK_RS07665 PF00551 Formyl transferase ALEK_RS07665 PF00378 Enoyl-CoA hydratase/isomerase ALEK_RS07670 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ALEK_RS07690 PF02653 Branched-chain amino acid transport system / permease component ALEK_RS07695 PF02653 Branched-chain amino acid transport system / permease component ALEK_RS07695 PF11862 Domain of unknown function (DUF3382) ALEK_RS07700 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALEK_RS07700 PF00005 ABC transporter ALEK_RS07705 PF00005 ABC transporter ALEK_RS07710 PF01914 MarC family integral membrane protein ALEK_RS07735 PF17764 3′ DNA-binding domain (3′BD) ALEK_RS07735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ALEK_RS07735 PF00270 DEAD/DEAH box helicase ALEK_RS07735 PF18074 Primosomal protein N C-terminal domain ALEK_RS07735 PF00271 Helicase conserved C-terminal domain ALEK_RS07745 PF16200 C-terminal region of band_7 ALEK_RS07745 PF01145 SPFH domain / Band 7 family ALEK_RS07750 PF14602 Hexapeptide repeat of succinyl-transferase ALEK_RS07750 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ALEK_RS07760 PF12848 ABC transporter ALEK_RS07760 PF16326 ABC transporter C-terminal domain ALEK_RS07760 PF00005 ABC transporter ALEK_RS07770 PF00893 Small Multidrug Resistance protein ALEK_RS07785 PF01184 GPR1/FUN34/yaaH family ALEK_RS07800 PF00005 ABC transporter ALEK_RS07805 PF02390 Putative methyltransferase ALEK_RS07815 PF01479 S4 domain ALEK_RS07815 PF00849 RNA pseudouridylate synthase ALEK_RS07820 PF01098 Cell cycle protein ALEK_RS07825 PF00491 Arginase family ALEK_RS07845 PF00202 Aminotransferase class-III ALEK_RS07850 PF06865 Pyrimidine/purine nucleoside phosphorylase ALEK_RS07870 PF04542 Sigma-70 region 2 ALEK_RS07870 PF04539 Sigma-70 region 3 ALEK_RS07870 PF04545 Sigma-70, region 4 ALEK_RS07870 PF00140 Sigma-70 factor, region 1.2 ALEK_RS07875 PF00694 Aconitase C-terminal domain ALEK_RS07880 PF00180 Isocitrate/isopropylmalate dehydrogenase ALEK_RS07895 PF00444 Ribosomal protein L36 ALEK_RS07900 PF00416 Ribosomal protein S13/S18 ALEK_RS07905 PF00411 Ribosomal protein S11 ALEK_RS07910 PF00163 Ribosomal protein S4/S9 N-terminal domain ALEK_RS07910 PF01479 S4 domain ALEK_RS07915 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ALEK_RS07915 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ALEK_RS07915 PF01000 RNA polymerase Rpb3/RpoA insert domain ALEK_RS07920 PF01196 Ribosomal protein L17 ALEK_RS07925 PF01425 Amidase ALEK_RS07930 PF00478 IMP dehydrogenase / GMP reductase domain ALEK_RS07930 PF00571 CBS domain ALEK_RS08000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALEK_RS08005 PF03641 Possible lysine decarboxylase ALEK_RS08020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALEK_RS08030 PF04143 Sulphur transport ALEK_RS08045 PF01810 LysE type translocator ALEK_RS08050 PF01810 LysE type translocator ALEK_RS08065 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS08065 PF00593 TonB dependent receptor ALEK_RS08065 PF07660 Secretin and TonB N terminus short domain ALEK_RS08085 PF00962 Adenosine/AMP deaminase ALEK_RS08095 PF00561 alpha/beta hydrolase fold ALEK_RS08105 PF00899 ThiF family ALEK_RS08110 PF02142 MGS-like domain ALEK_RS08110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALEK_RS08110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALEK_RS08135 PF03412 Peptidase C39 family ALEK_RS08135 PF00664 ABC transporter transmembrane region ALEK_RS08135 PF00005 ABC transporter ALEK_RS08185 PF01761 3-dehydroquinate synthase ALEK_RS08195 PF04055 Radical SAM superfamily ALEK_RS08195 PF00919 Uncharacterized protein family UPF0004 ALEK_RS08200 PF01434 Peptidase family M41 ALEK_RS08200 PF17862 AAA+ lid domain ALEK_RS08200 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS08200 PF06480 FtsH Extracellular ALEK_RS08210 PF00994 Probable molybdopterin binding domain ALEK_RS08215 PF00939 Sodium:sulfate symporter transmembrane region ALEK_RS08220 PF00488 MutS domain V ALEK_RS08220 PF01713 Smr domain ALEK_RS08240 PF01546 Peptidase family M20/M25/M40 ALEK_RS08240 PF07687 Peptidase dimerisation domain ALEK_RS08255 PF00583 Acetyltransferase (GNAT) family ALEK_RS08260 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ALEK_RS08275 PF12833 Helix-turn-helix domain ALEK_RS08275 PF02311 AraC-like ligand binding domain ALEK_RS08285 PF03831 PhnA domain ALEK_RS08285 PF08274 PhnA Zinc-Ribbon ALEK_RS08295 PF00005 ABC transporter ALEK_RS08305 PF02311 AraC-like ligand binding domain ALEK_RS08305 PF12833 Helix-turn-helix domain ALEK_RS08315 PF12833 Helix-turn-helix domain ALEK_RS08320 PF01161 Phosphatidylethanolamine-binding protein ALEK_RS08340 PF00672 HAMP domain ALEK_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08340 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALEK_RS08340 PF00072 Response regulator receiver domain ALEK_RS08340 PF01627 Hpt domain ALEK_RS08350 PF01177 Asp/Glu/Hydantoin racemase ALEK_RS08355 PF03466 LysR substrate binding domain ALEK_RS08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS08360 PF03601 Conserved hypothetical protein 698 ALEK_RS08375 PF01638 HxlR-like helix-turn-helix ALEK_RS08380 PF02525 Flavodoxin-like fold ALEK_RS08390 PF00881 Nitroreductase family ALEK_RS08395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08395 PF08447 PAS fold ALEK_RS08395 PF08448 PAS fold ALEK_RS08400 PF00196 Bacterial regulatory proteins, luxR family ALEK_RS08400 PF00072 Response regulator receiver domain ALEK_RS08410 PF00072 Response regulator receiver domain ALEK_RS08410 PF01339 CheB methylesterase ALEK_RS08415 PF08447 PAS fold ALEK_RS08415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS08420 PF00005 ABC transporter ALEK_RS08420 PF08402 TOBE domain ALEK_RS08425 PF08448 PAS fold ALEK_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08425 PF08447 PAS fold ALEK_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS08455 PF03459 TOBE domain ALEK_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS08470 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS08470 PF00072 Response regulator receiver domain ALEK_RS08475 PF18719 ArlS sensor domain ALEK_RS08475 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08480 PF02423 Ornithine cyclodeaminase/mu-crystallin family ALEK_RS08485 PF00491 Arginase family ALEK_RS08495 PF02926 THUMP domain ALEK_RS08495 PF02568 Thiamine biosynthesis protein (ThiI) ALEK_RS08505 PF00072 Response regulator receiver domain ALEK_RS08505 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS08510 PF03705 CheR methyltransferase, all-alpha domain ALEK_RS08510 PF01739 CheR methyltransferase, SAM binding domain ALEK_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08515 PF00072 Response regulator receiver domain ALEK_RS08515 PF09308 LuxQ, periplasmic ALEK_RS08515 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08520 PF00005 ABC transporter ALEK_RS08520 PF12848 ABC transporter ALEK_RS08525 PF03061 Thioesterase superfamily ALEK_RS08535 PF00072 Response regulator receiver domain ALEK_RS08535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALEK_RS08535 PF00672 HAMP domain ALEK_RS08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08535 PF01627 Hpt domain ALEK_RS08535 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08540 PF01653 NAD-dependent DNA ligase adenylation domain ALEK_RS08540 PF03120 NAD-dependent DNA ligase OB-fold domain ALEK_RS08540 PF12826 Helix-hairpin-helix motif ALEK_RS08540 PF00533 BRCA1 C Terminus (BRCT) domain ALEK_RS08550 PF09308 LuxQ, periplasmic ALEK_RS08550 PF00072 Response regulator receiver domain ALEK_RS08550 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08555 PF08448 PAS fold ALEK_RS08555 PF08447 PAS fold ALEK_RS08560 PF00072 Response regulator receiver domain ALEK_RS08560 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS08565 PF08448 PAS fold ALEK_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08565 PF08447 PAS fold ALEK_RS08590 PF01546 Peptidase family M20/M25/M40 ALEK_RS08590 PF07687 Peptidase dimerisation domain ALEK_RS08595 PF01966 HD domain ALEK_RS08605 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS08635 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS08635 PF00072 Response regulator receiver domain ALEK_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08640 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08640 PF08448 PAS fold ALEK_RS08640 PF00072 Response regulator receiver domain ALEK_RS08640 PF13426 PAS domain ALEK_RS08655 PF00106 short chain dehydrogenase ALEK_RS08660 PF01578 Cytochrome C assembly protein ALEK_RS08660 PF05140 ResB-like family ALEK_RS08665 PF08003 Protein of unknown function (DUF1698) ALEK_RS08670 PF00563 EAL domain ALEK_RS08670 PF01590 GAF domain ALEK_RS08670 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS08670 PF00360 Phytochrome region ALEK_RS08675 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS08675 PF17158 Membrane-associated sensor, integral membrane domain ALEK_RS08680 PF00753 Metallo-beta-lactamase superfamily ALEK_RS08690 PF07702 UTRA domain ALEK_RS08690 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS08695 PF00005 ABC transporter ALEK_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS08720 PF05861 Bacterial phosphonate metabolism protein (PhnI) ALEK_RS08725 PF06007 Phosphonate metabolism protein PhnJ ALEK_RS08730 PF00005 ABC transporter ALEK_RS08735 PF00005 ABC transporter ALEK_RS08740 PF07969 Amidohydrolase family ALEK_RS08745 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS08750 PF00672 HAMP domain ALEK_RS08750 PF02203 Tar ligand binding domain homologue ALEK_RS08750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS08755 PF02885 Glycosyl transferase family, helical bundle domain ALEK_RS08755 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ALEK_RS08755 PF00625 Guanylate kinase ALEK_RS08755 PF00591 Glycosyl transferase family, a/b domain ALEK_RS08775 PF03109 ABC1 family ALEK_RS08790 PF08212 Lipocalin-like domain ALEK_RS08815 PF01593 Flavin containing amine oxidoreductase ALEK_RS08820 PF08212 Lipocalin-like domain ALEK_RS08835 PF00106 short chain dehydrogenase ALEK_RS08850 PF00529 HlyD membrane-fusion protein of T1SS ALEK_RS08855 PF03412 Peptidase C39 family ALEK_RS08855 PF00664 ABC transporter transmembrane region ALEK_RS08855 PF00005 ABC transporter ALEK_RS08875 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS08880 PF08447 PAS fold ALEK_RS08880 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS08880 PF00989 PAS fold ALEK_RS08885 PF00226 DnaJ domain ALEK_RS08885 PF00684 DnaJ central domain ALEK_RS08885 PF01556 DnaJ C terminal domain ALEK_RS08890 PF13662 Toprim domain ALEK_RS08890 PF02132 RecR protein ALEK_RS08895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS08895 PF08447 PAS fold ALEK_RS08900 PF02203 Tar ligand binding domain homologue ALEK_RS08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS08900 PF00672 HAMP domain ALEK_RS08910 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS08925 PF18030 RimK PreATP-grasp domain ALEK_RS08925 PF08443 RimK-like ATP-grasp domain ALEK_RS08935 PF00764 Arginosuccinate synthase ALEK_RS08945 PF00591 Glycosyl transferase family, a/b domain ALEK_RS08945 PF02885 Glycosyl transferase family, helical bundle domain ALEK_RS08950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ALEK_RS08955 PF00005 ABC transporter ALEK_RS08955 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALEK_RS08960 PF08448 PAS fold ALEK_RS08960 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS08965 PF08495 FIST N domain ALEK_RS08965 PF00563 EAL domain ALEK_RS08965 PF10442 FIST C domain ALEK_RS08965 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS08970 PF02348 Cytidylyltransferase ALEK_RS08975 PF01367 5'-3' exonuclease, C-terminal SAM fold ALEK_RS08975 PF01612 3'-5' exonuclease ALEK_RS08975 PF00476 DNA polymerase family A ALEK_RS08975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ALEK_RS08995 PF01790 Prolipoprotein diacylglyceryl transferase ALEK_RS09000 PF13183 4Fe-4S dicluster domain ALEK_RS09000 PF02754 Cysteine-rich domain ALEK_RS09000 PF02665 Nitrate reductase gamma subunit ALEK_RS09005 PF06969 HemN C-terminal domain ALEK_RS09005 PF04055 Radical SAM superfamily ALEK_RS09010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALEK_RS09010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALEK_RS09015 PF03477 ATP cone domain ALEK_RS09015 PF02867 Ribonucleotide reductase, barrel domain ALEK_RS09015 PF00317 Ribonucleotide reductase, all-alpha domain ALEK_RS09030 PF00072 Response regulator receiver domain ALEK_RS09030 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS09035 PF08447 PAS fold ALEK_RS09035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS09040 PF00490 Delta-aminolevulinic acid dehydratase ALEK_RS09045 PF00925 GTP cyclohydrolase II ALEK_RS09050 PF02527 rRNA small subunit methyltransferase G ALEK_RS09070 PF02092 Glycyl-tRNA synthetase beta subunit ALEK_RS09075 PF12833 Helix-turn-helix domain ALEK_RS09080 PF01810 LysE type translocator ALEK_RS09115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ALEK_RS09115 PF00925 GTP cyclohydrolase II ALEK_RS09125 PF01293 Phosphoenolpyruvate carboxykinase ALEK_RS09130 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ALEK_RS09155 PF00133 tRNA synthetases class I (I, L, M and V) ALEK_RS09155 PF01588 Putative tRNA binding domain ALEK_RS09155 PF09334 tRNA synthetases class I (M) ALEK_RS09165 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ALEK_RS09175 PF04231 Endonuclease I ALEK_RS09195 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALEK_RS09200 PF05193 Peptidase M16 inactive domain ALEK_RS09205 PF04055 Radical SAM superfamily ALEK_RS09210 PF07244 Surface antigen variable number repeat ALEK_RS09210 PF01103 Surface antigen ALEK_RS09220 PF00809 Pterin binding enzyme ALEK_RS09235 PF01842 ACT domain ALEK_RS09235 PF13840 ACT domain ALEK_RS09235 PF00696 Amino acid kinase family ALEK_RS09240 PF00293 NUDIX domain ALEK_RS09245 PF06969 HemN C-terminal domain ALEK_RS09245 PF04055 Radical SAM superfamily ALEK_RS09250 PF17827 PrmC N-terminal domain ALEK_RS09250 PF05175 Methyltransferase small domain ALEK_RS09255 PF01432 Peptidase family M3 ALEK_RS09270 PF18644 Phage integrase SAM-like domain ALEK_RS09270 PF00589 Phage integrase family ALEK_RS09275 PF00072 Response regulator receiver domain ALEK_RS09275 PF01339 CheB methylesterase ALEK_RS09280 PF03975 CheD chemotactic sensory transduction ALEK_RS09285 PF03705 CheR methyltransferase, all-alpha domain ALEK_RS09285 PF01739 CheR methyltransferase, SAM binding domain ALEK_RS09290 PF01584 CheW-like domain ALEK_RS09290 PF09078 CheY binding ALEK_RS09290 PF02895 Signal transducing histidine kinase, homodimeric domain ALEK_RS09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS09290 PF01627 Hpt domain ALEK_RS09295 PF00072 Response regulator receiver domain ALEK_RS09300 PF03725 3' exoribonuclease family, domain 2 ALEK_RS09300 PF00575 S1 RNA binding domain ALEK_RS09300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ALEK_RS09300 PF01138 3' exoribonuclease family, domain 1 ALEK_RS09300 PF00013 KH domain ALEK_RS09310 PF04453 LPS transport system D ALEK_RS09310 PF03968 OstA-like protein ALEK_RS09320 PF02843 Phosphoribosylglycinamide synthetase, C domain ALEK_RS09320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALEK_RS09320 PF02844 Phosphoribosylglycinamide synthetase, N domain ALEK_RS09330 PF01740 STAS domain ALEK_RS09330 PF00916 Sulfate permease family ALEK_RS09335 PF01926 50S ribosome-binding GTPase ALEK_RS09335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ALEK_RS09340 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ALEK_RS09340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALEK_RS09345 PF09397 Ftsk gamma domain ALEK_RS09345 PF17854 FtsK alpha domain ALEK_RS09345 PF01580 FtsK/SpoIIIE family ALEK_RS09350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ALEK_RS09350 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS09355 PF10369 Small subunit of acetolactate synthase ALEK_RS09360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALEK_RS09360 PF00205 Thiamine pyrophosphate enzyme, central domain ALEK_RS09360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALEK_RS09370 PF02541 Ppx/GppA phosphatase family ALEK_RS09375 PF01066 CDP-alcohol phosphatidyltransferase ALEK_RS09380 PF01590 GAF domain ALEK_RS09380 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS09380 PF00360 Phytochrome region ALEK_RS09380 PF00563 EAL domain ALEK_RS09385 PF00916 Sulfate permease family ALEK_RS09385 PF01740 STAS domain ALEK_RS09400 PF00085 Thioredoxin ALEK_RS09410 PF01171 PP-loop family ALEK_RS09425 PF03454 MoeA C-terminal region (domain IV) ALEK_RS09425 PF00994 Probable molybdopterin binding domain ALEK_RS09425 PF03453 MoeA N-terminal region (domain I and II) ALEK_RS09430 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS09430 PF00563 EAL domain ALEK_RS09430 PF01590 GAF domain ALEK_RS09430 PF00360 Phytochrome region ALEK_RS09440 PF02646 RmuC family ALEK_RS09445 PF01435 Peptidase family M48 ALEK_RS09445 PF16491 CAAX prenyl protease N-terminal, five membrane helices ALEK_RS09450 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS09450 PF05230 MASE2 domain ALEK_RS09460 PF03061 Thioesterase superfamily ALEK_RS09490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALEK_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS09500 PF12911 N-terminal TM domain of oligopeptide transport permease C ALEK_RS09505 PF00005 ABC transporter ALEK_RS09505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALEK_RS09510 PF01554 MatE ALEK_RS09520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS09520 PF08447 PAS fold ALEK_RS09525 PF02203 Tar ligand binding domain homologue ALEK_RS09525 PF00672 HAMP domain ALEK_RS09525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS09530 PF00248 Aldo/keto reductase family ALEK_RS09545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS09560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALEK_RS09560 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALEK_RS09575 PF01888 CbiD ALEK_RS09580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS09585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS09590 PF01890 Cobalamin synthesis G C-terminus ALEK_RS09590 PF11760 Cobalamin synthesis G N-terminal ALEK_RS09590 PF11761 Cobalamin biosynthesis central region ALEK_RS09595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALEK_RS09595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS09610 PF12852 Cupin ALEK_RS09610 PF12833 Helix-turn-helix domain ALEK_RS09620 PF01209 ubiE/COQ5 methyltransferase family ALEK_RS09630 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS09630 PF00563 EAL domain ALEK_RS09630 PF03707 Bacterial signalling protein N terminal repeat ALEK_RS09645 PF12833 Helix-turn-helix domain ALEK_RS09650 PF08241 Methyltransferase domain ALEK_RS09655 PF01032 FecCD transport family ALEK_RS09660 PF00005 ABC transporter ALEK_RS09670 PF00593 TonB dependent receptor ALEK_RS09670 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS09685 PF13419 Haloacid dehalogenase-like hydrolase ALEK_RS09695 PF16200 C-terminal region of band_7 ALEK_RS09695 PF01145 SPFH domain / Band 7 family ALEK_RS09705 PF00072 Response regulator receiver domain ALEK_RS09705 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS09710 PF00588 SpoU rRNA Methylase family ALEK_RS09715 PF01842 ACT domain ALEK_RS09715 PF00551 Formyl transferase ALEK_RS09720 PF00391 PEP-utilising enzyme, mobile domain ALEK_RS09720 PF02887 Pyruvate kinase, alpha/beta domain ALEK_RS09720 PF00224 Pyruvate kinase, barrel domain ALEK_RS09725 PF00171 Aldehyde dehydrogenase family ALEK_RS09730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALEK_RS09730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALEK_RS09745 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS09755 PF00005 ABC transporter ALEK_RS09755 PF08402 TOBE domain ALEK_RS09760 PF00005 ABC transporter ALEK_RS09760 PF17912 MalK OB fold domain ALEK_RS09765 PF01266 FAD dependent oxidoreductase ALEK_RS09765 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ALEK_RS09770 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS09770 PF07702 UTRA domain ALEK_RS09775 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS09775 PF07702 UTRA domain ALEK_RS09780 PF01515 Phosphate acetyl/butaryl transferase ALEK_RS09780 PF03949 Malic enzyme, NAD binding domain ALEK_RS09780 PF00390 Malic enzyme, N-terminal domain ALEK_RS09785 PF10415 Fumarase C C-terminus ALEK_RS09785 PF00206 Lyase ALEK_RS09790 PF03737 Aldolase/RraA ALEK_RS09795 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS09795 PF00989 PAS fold ALEK_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS09800 PF00072 Response regulator receiver domain ALEK_RS09800 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS09805 PF00375 Sodium:dicarboxylate symporter family ALEK_RS09820 PF08501 Shikimate dehydrogenase substrate binding domain ALEK_RS09840 PF03313 Serine dehydratase alpha chain ALEK_RS09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS09845 PF03466 LysR substrate binding domain ALEK_RS09855 PF01769 Divalent cation transporter ALEK_RS09855 PF03448 MgtE intracellular N domain ALEK_RS09855 PF00571 CBS domain ALEK_RS09870 PF03738 Glutathionylspermidine synthase preATP-grasp ALEK_RS09900 PF03275 UDP-galactopyranose mutase ALEK_RS09905 PF03239 Iron permease FTR1 family ALEK_RS09910 PF00491 Arginase family ALEK_RS09915 PF01979 Amidohydrolase family ALEK_RS09920 PF01175 Urocanase Rossmann-like domain ALEK_RS09920 PF17392 Urocanase C-terminal domain ALEK_RS09920 PF17391 Urocanase N-terminal domain ALEK_RS09925 PF00221 Aromatic amino acid lyase ALEK_RS09930 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS09930 PF07702 UTRA domain ALEK_RS09955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALEK_RS09965 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ALEK_RS09970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALEK_RS09975 PF02540 NAD synthase ALEK_RS09995 PF05099 Tellurite resistance protein TerB ALEK_RS09995 PF00226 DnaJ domain ALEK_RS10000 PF02416 mttA/Hcf106 family ALEK_RS10005 PF00902 Sec-independent protein translocase protein (TatC) ALEK_RS10010 PF02547 Queuosine biosynthesis protein ALEK_RS10035 PF01467 Cytidylyltransferase-like ALEK_RS10040 PF00209 Sodium:neurotransmitter symporter family ALEK_RS10060 PF02595 Glycerate kinase family ALEK_RS10065 PF04134 Protein of unknown function, DUF393 ALEK_RS10075 PF13286 Phosphohydrolase-associated domain ALEK_RS10075 PF01966 HD domain ALEK_RS10080 PF00027 Cyclic nucleotide-binding domain ALEK_RS10080 PF00520 Ion transport protein ALEK_RS10100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALEK_RS10110 PF12282 Signal transduction histidine kinase ALEK_RS10110 PF07568 Histidine kinase ALEK_RS10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10115 PF00072 Response regulator receiver domain ALEK_RS10115 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS10125 PF05971 RNA methyltransferase ALEK_RS10170 PF06906 Protein of unknown function (DUF1272) ALEK_RS10180 PF08239 Bacterial SH3 domain ALEK_RS10195 PF00072 Response regulator receiver domain ALEK_RS10195 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS10200 PF00672 HAMP domain ALEK_RS10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10200 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS10205 PF14493 Helix-turn-helix domain ALEK_RS10205 PF05970 PIF1-like helicase ALEK_RS10210 PF05987 Bacterial protein of unknown function (DUF898) ALEK_RS10215 PF01435 Peptidase family M48 ALEK_RS10230 PF01966 HD domain ALEK_RS10240 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS10245 PF08447 PAS fold ALEK_RS10265 PF00072 Response regulator receiver domain ALEK_RS10265 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS10275 PF03781 Sulfatase-modifying factor enzyme 1 ALEK_RS10275 PF12867 DinB superfamily ALEK_RS10290 PF03737 Aldolase/RraA ALEK_RS10295 PF12146 Serine aminopeptidase, S33 ALEK_RS10310 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS10315 PF02310 B12 binding domain ALEK_RS10320 PF06368 Methylaspartate mutase E chain (MutE) ALEK_RS10330 PF13193 AMP-binding enzyme C-terminal domain ALEK_RS10330 PF00501 AMP-binding enzyme ALEK_RS10340 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS10360 PF01063 Amino-transferase class IV ALEK_RS10370 PF00873 AcrB/AcrD/AcrF family ALEK_RS10380 PF01795 MraW methylase family ALEK_RS10390 PF00216 Bacterial DNA-binding protein ALEK_RS10400 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS10400 PF00072 Response regulator receiver domain ALEK_RS10405 PF00762 Ferrochelatase ALEK_RS10415 PF00072 Response regulator receiver domain ALEK_RS10415 PF04397 LytTr DNA-binding domain ALEK_RS10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10420 PF13492 GAF domain ALEK_RS10420 PF07694 5TMR of 5TMR-LYT ALEK_RS10420 PF06580 Histidine kinase ALEK_RS10425 PF01593 Flavin containing amine oxidoreductase ALEK_RS10435 PF08349 Protein of unknown function (DUF1722) ALEK_RS10440 PF00270 DEAD/DEAH box helicase ALEK_RS10440 PF08482 ATP-dependent helicase C-terminal ALEK_RS10440 PF00271 Helicase conserved C-terminal domain ALEK_RS10440 PF04408 Helicase associated domain (HA2) ALEK_RS10450 PF02690 Na+/Pi-cotransporter ALEK_RS10455 PF00271 Helicase conserved C-terminal domain ALEK_RS10455 PF00270 DEAD/DEAH box helicase ALEK_RS10470 PF02311 AraC-like ligand binding domain ALEK_RS10470 PF12833 Helix-turn-helix domain ALEK_RS10480 PF07196 Flagellin hook IN motif ALEK_RS10480 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS10480 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS10480 PF07196 Flagellin hook IN motif ALEK_RS10480 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS10480 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10500 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS10500 PF00072 Response regulator receiver domain ALEK_RS10525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS10525 PF02203 Tar ligand binding domain homologue ALEK_RS10525 PF00672 HAMP domain ALEK_RS10530 PF00664 ABC transporter transmembrane region ALEK_RS10530 PF00005 ABC transporter ALEK_RS10540 PF01594 AI-2E family transporter ALEK_RS10555 PF01810 LysE type translocator ALEK_RS10565 PF03548 Outer membrane lipoprotein carrier protein LolA ALEK_RS10570 PF00271 Helicase conserved C-terminal domain ALEK_RS10570 PF07516 SecA Wing and Scaffold domain ALEK_RS10570 PF01043 SecA preprotein cross-linking domain ALEK_RS10570 PF02810 SEC-C motif ALEK_RS10570 PF07517 SecA DEAD-like domain ALEK_RS10575 PF02687 FtsX-like permease family ALEK_RS10575 PF12704 MacB-like periplasmic core domain ALEK_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10580 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS10580 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS10590 PF11849 Domain of unknown function (DUF3369) ALEK_RS10605 PF03971 Monomeric isocitrate dehydrogenase ALEK_RS10610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALEK_RS10610 PF00056 lactate/malate dehydrogenase, NAD binding domain ALEK_RS10620 PF01545 Cation efflux family ALEK_RS10635 PF01266 FAD dependent oxidoreductase ALEK_RS10635 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ALEK_RS10645 PF01556 DnaJ C terminal domain ALEK_RS10645 PF00226 DnaJ domain ALEK_RS10650 PF13411 MerR HTH family regulatory protein ALEK_RS10655 PF12327 FtsZ family, C-terminal domain ALEK_RS10655 PF00091 Tubulin/FtsZ family, GTPase domain ALEK_RS10660 PF02491 SHS2 domain inserted in FTSA ALEK_RS10670 PF13538 UvrD-like helicase C-terminal domain ALEK_RS10670 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ALEK_RS10670 PF14490 Helix-hairpin-helix containing domain ALEK_RS10680 PF03960 ArsC family ALEK_RS10695 PF01435 Peptidase family M48 ALEK_RS10715 PF03717 Penicillin-binding Protein dimerisation domain ALEK_RS10715 PF00905 Penicillin binding protein transpeptidase domain ALEK_RS10725 PF07670 Nucleoside recognition ALEK_RS10730 PF00813 FliP family ALEK_RS10735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALEK_RS10750 PF00873 AcrB/AcrD/AcrF family ALEK_RS10755 PF00873 AcrB/AcrD/AcrF family ALEK_RS10760 PF00072 Response regulator receiver domain ALEK_RS10760 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS10765 PF13755 Sensor N-terminal transmembrane domain ALEK_RS10765 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10765 PF13756 Stimulus-sensing domain ALEK_RS10765 PF00672 HAMP domain ALEK_RS10770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALEK_RS10775 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS10780 PF12911 N-terminal TM domain of oligopeptide transport permease C ALEK_RS10780 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS10785 PF00005 ABC transporter ALEK_RS10785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALEK_RS10790 PF00005 ABC transporter ALEK_RS10790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALEK_RS10815 PF01926 50S ribosome-binding GTPase ALEK_RS10835 PF00475 Imidazoleglycerol-phosphate dehydratase ALEK_RS10840 PF05036 Sporulation related domain ALEK_RS10840 PF03330 Lytic transglycolase ALEK_RS10845 PF01026 TatD related DNase ALEK_RS10855 PF10431 C-terminal, D2-small domain, of ClpB protein ALEK_RS10855 PF07724 AAA domain (Cdc48 subfamily) ALEK_RS10860 PF00227 Proteasome subunit ALEK_RS10865 PF03948 Ribosomal protein L9, C-terminal domain ALEK_RS10865 PF01281 Ribosomal protein L9, N-terminal domain ALEK_RS10875 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS10875 PF00072 Response regulator receiver domain ALEK_RS10885 PF00239 Resolvase, N terminal domain ALEK_RS10885 PF02796 Helix-turn-helix domain of resolvase ALEK_RS10890 PF02441 Flavoprotein ALEK_RS10895 PF01467 Cytidylyltransferase-like ALEK_RS10900 PF02223 Thymidylate kinase ALEK_RS10905 PF03129 Anticodon binding domain ALEK_RS10905 PF13393 Histidyl-tRNA synthetase ALEK_RS10910 PF17810 Arginine decarboxylase helical bundle domain ALEK_RS10910 PF17944 Arginine decarboxylase C-terminal helical extension ALEK_RS10910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALEK_RS10915 PF06426 Serine acetyltransferase, N-terminal ALEK_RS10915 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS10925 PF08448 PAS fold ALEK_RS10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS10925 PF08447 PAS fold ALEK_RS10930 PF00330 Aconitase family (aconitate hydratase) ALEK_RS10930 PF00694 Aconitase C-terminal domain ALEK_RS10950 PF00199 Catalase ALEK_RS10950 PF06628 Catalase-related immune-responsive ALEK_RS10955 PF17760 UvrA interaction domain ALEK_RS10955 PF17755 UvrA DNA-binding domain ALEK_RS10965 PF17151 Periplasmic sensor domain ALEK_RS10965 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS10975 PF03471 Transporter associated domain ALEK_RS10975 PF01595 Cyclin M transmembrane N-terminal domain ALEK_RS10975 PF00571 CBS domain ALEK_RS10980 PF00194 Eukaryotic-type carbonic anhydrase ALEK_RS10985 PF01243 Pyridoxamine 5'-phosphate oxidase ALEK_RS11000 PF01594 AI-2E family transporter ALEK_RS11020 PF01471 Putative peptidoglycan binding domain ALEK_RS11020 PF01510 N-acetylmuramoyl-L-alanine amidase ALEK_RS11030 PF08495 FIST N domain ALEK_RS11030 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS11030 PF00563 EAL domain ALEK_RS11030 PF10442 FIST C domain ALEK_RS11040 PF01152 Bacterial-like globin ALEK_RS11050 PF07690 Major Facilitator Superfamily ALEK_RS11055 PF00365 Phosphofructokinase ALEK_RS11060 PF00375 Sodium:dicarboxylate symporter family ALEK_RS11070 PF03449 Transcription elongation factor, N-terminal ALEK_RS11070 PF01272 Transcription elongation factor, GreA/GreB, C-term ALEK_RS11075 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS11080 PF08447 PAS fold ALEK_RS11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11080 PF08448 PAS fold ALEK_RS11085 PF00072 Response regulator receiver domain ALEK_RS11085 PF08279 HTH domain ALEK_RS11095 PF00403 Heavy-metal-associated domain ALEK_RS11095 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS11095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALEK_RS11100 PF01810 LysE type translocator ALEK_RS11105 PF12833 Helix-turn-helix domain ALEK_RS11105 PF02311 AraC-like ligand binding domain ALEK_RS11110 PF06445 GyrI-like small molecule binding domain ALEK_RS11110 PF12833 Helix-turn-helix domain ALEK_RS11115 PF00075 RNase H ALEK_RS11130 PF03749 Sugar fermentation stimulation protein RE domain ALEK_RS11130 PF17746 SfsA N-terminal OB domain ALEK_RS11145 PF02311 AraC-like ligand binding domain ALEK_RS11145 PF12833 Helix-turn-helix domain ALEK_RS11155 PF01595 Cyclin M transmembrane N-terminal domain ALEK_RS11155 PF00571 CBS domain ALEK_RS11160 PF07729 FCD domain ALEK_RS11160 PF00392 Bacterial regulatory proteins, gntR family ALEK_RS11175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS11180 PF01266 FAD dependent oxidoreductase ALEK_RS11190 PF04324 BFD-like [2Fe-2S] binding domain ALEK_RS11190 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS11200 PF01042 Endoribonuclease L-PSP ALEK_RS11205 PF03458 UPF0126 domain ALEK_RS11210 PF00072 Response regulator receiver domain ALEK_RS11215 PF00672 HAMP domain ALEK_RS11215 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALEK_RS11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11215 PF00072 Response regulator receiver domain ALEK_RS11215 PF01627 Hpt domain ALEK_RS11220 PF01593 Flavin containing amine oxidoreductase ALEK_RS11220 PF02027 RolB/RolC glucosidase family ALEK_RS11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11225 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11225 PF00989 PAS fold ALEK_RS11255 PF02082 Transcriptional regulator ALEK_RS11260 PF00034 Cytochrome c ALEK_RS11265 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALEK_RS11270 PF00092 von Willebrand factor type A domain ALEK_RS11275 PF08406 CbbQ/NirQ/NorQ C-terminal ALEK_RS11275 PF07728 AAA domain (dynein-related subfamily) ALEK_RS11280 PF00258 Flavodoxin ALEK_RS11290 PF07995 Glucose / Sorbosone dehydrogenase ALEK_RS11300 PF13193 AMP-binding enzyme C-terminal domain ALEK_RS11300 PF16177 Acetyl-coenzyme A synthetase N-terminus ALEK_RS11300 PF00501 AMP-binding enzyme ALEK_RS11330 PF00561 alpha/beta hydrolase fold ALEK_RS11335 PF08241 Methyltransferase domain ALEK_RS11340 PF06719 AraC-type transcriptional regulator N-terminus ALEK_RS11340 PF12833 Helix-turn-helix domain ALEK_RS11345 PF02525 Flavodoxin-like fold ALEK_RS11355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALEK_RS11355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALEK_RS11360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ALEK_RS11365 PF01177 Asp/Glu/Hydantoin racemase ALEK_RS11425 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ALEK_RS11425 PF17287 POTRA domain ALEK_RS11425 PF08479 POTRA domain, ShlB-type ALEK_RS11430 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS11430 PF00072 Response regulator receiver domain ALEK_RS11435 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11435 PF00989 PAS fold ALEK_RS11440 PF00072 Response regulator receiver domain ALEK_RS11440 PF12833 Helix-turn-helix domain ALEK_RS11445 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11465 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS11490 PF00301 Rubredoxin ALEK_RS11505 PF01734 Patatin-like phospholipase ALEK_RS11505 PF00027 Cyclic nucleotide-binding domain ALEK_RS11510 PF01479 S4 domain ALEK_RS11510 PF00849 RNA pseudouridylate synthase ALEK_RS11540 PF09055 Nickel-containing superoxide dismutase ALEK_RS11550 PF05099 Tellurite resistance protein TerB ALEK_RS11550 PF00226 DnaJ domain ALEK_RS11570 PF01042 Endoribonuclease L-PSP ALEK_RS11590 PF00117 Glutamine amidotransferase class-I ALEK_RS11590 PF00958 GMP synthase C terminal domain ALEK_RS11590 PF02540 NAD synthase ALEK_RS11600 PF03600 Citrate transporter ALEK_RS11605 PF00890 FAD binding domain ALEK_RS11605 PF02910 Fumarate reductase flavoprotein C-term ALEK_RS11615 PF01863 Protein of unknown function DUF45 ALEK_RS11620 PF00155 Aminotransferase class I and II ALEK_RS11625 PF01545 Cation efflux family ALEK_RS11625 PF16916 Dimerisation domain of Zinc Transporter ALEK_RS11630 PF00581 Rhodanese-like domain ALEK_RS11640 PF01966 HD domain ALEK_RS11645 PF00211 Adenylate and Guanylate cyclase catalytic domain ALEK_RS11670 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS11670 PF00072 Response regulator receiver domain ALEK_RS11675 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS11675 PF00072 Response regulator receiver domain ALEK_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11680 PF00989 PAS fold ALEK_RS11680 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11690 PF01740 STAS domain ALEK_RS11695 PF02397 Bacterial sugar transferase ALEK_RS11700 PF00534 Glycosyl transferases group 1 ALEK_RS11700 PF13439 Glycosyltransferase Family 4 ALEK_RS11710 PF00535 Glycosyl transferase family 2 ALEK_RS11725 PF00534 Glycosyl transferases group 1 ALEK_RS11725 PF13439 Glycosyltransferase Family 4 ALEK_RS11735 PF00483 Nucleotidyl transferase ALEK_RS11740 PF00483 Nucleotidyl transferase ALEK_RS11740 PF01050 Mannose-6-phosphate isomerase ALEK_RS11785 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS11820 PF09424 Yqey-like protein ALEK_RS11825 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS11840 PF01966 HD domain ALEK_RS11870 PF08240 Alcohol dehydrogenase GroES-like domain ALEK_RS11870 PF00107 Zinc-binding dehydrogenase ALEK_RS11880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALEK_RS11890 PF03737 Aldolase/RraA ALEK_RS11895 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS11895 PF00072 Response regulator receiver domain ALEK_RS11900 PF00672 HAMP domain ALEK_RS11900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS11900 PF17200 Single Cache domain 2 ALEK_RS11915 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS11925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11945 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11945 PF00989 PAS fold ALEK_RS11945 PF00672 HAMP domain ALEK_RS11970 PF12706 Beta-lactamase superfamily domain ALEK_RS11975 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS11975 PF00072 Response regulator receiver domain ALEK_RS11980 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS11980 PF08521 Two-component sensor kinase N-terminal ALEK_RS11990 PF12848 ABC transporter ALEK_RS11990 PF16326 ABC transporter C-terminal domain ALEK_RS11990 PF00005 ABC transporter ALEK_RS12005 PF01209 ubiE/COQ5 methyltransferase family ALEK_RS12015 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALEK_RS12015 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ALEK_RS12020 PF00034 Cytochrome c ALEK_RS12020 PF03150 Di-haem cytochrome c peroxidase ALEK_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12025 PF13426 PAS domain ALEK_RS12025 PF00072 Response regulator receiver domain ALEK_RS12030 PF02567 Phenazine biosynthesis-like protein ALEK_RS12035 PF12833 Helix-turn-helix domain ALEK_RS12040 PF08447 PAS fold ALEK_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12040 PF08448 PAS fold ALEK_RS12045 PF02086 D12 class N6 adenine-specific DNA methyltransferase ALEK_RS12070 PF00881 Nitroreductase family ALEK_RS12080 PF00106 short chain dehydrogenase ALEK_RS12085 PF03553 Na+/H+ antiporter family ALEK_RS12095 PF08447 PAS fold ALEK_RS12095 PF08448 PAS fold ALEK_RS12095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12100 PF12833 Helix-turn-helix domain ALEK_RS12100 PF00072 Response regulator receiver domain ALEK_RS12110 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ALEK_RS12110 PF02321 Outer membrane efflux protein ALEK_RS12115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALEK_RS12115 PF00529 HlyD membrane-fusion protein of T1SS ALEK_RS12120 PF11742 Protein of unknown function (DUF3302) ALEK_RS12130 PF12911 N-terminal TM domain of oligopeptide transport permease C ALEK_RS12130 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS12145 PF00013 KH domain ALEK_RS12145 PF01966 HD domain ALEK_RS12145 PF12072 Domain of unknown function (DUF3552) ALEK_RS12155 PF00578 AhpC/TSA family ALEK_RS12160 PF00448 SRP54-type protein, GTPase domain ALEK_RS12165 PF01810 LysE type translocator ALEK_RS12175 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS12175 PF00072 Response regulator receiver domain ALEK_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALEK_RS12190 PF05728 Uncharacterised protein family (UPF0227) ALEK_RS12200 PF18073 Rubredoxin metal binding domain ALEK_RS12210 PF02130 Uncharacterized protein family UPF0054 ALEK_RS12215 PF01699 Sodium/calcium exchanger protein ALEK_RS12225 PF02915 Rubrerythrin ALEK_RS12230 PF02915 Rubrerythrin ALEK_RS12240 PF03023 Lipid II flippase MurJ ALEK_RS12250 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALEK_RS12255 PF00510 Cytochrome c oxidase subunit III ALEK_RS12265 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALEK_RS12265 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ALEK_RS12270 PF01040 UbiA prenyltransferase family ALEK_RS12275 PF00664 ABC transporter transmembrane region ALEK_RS12275 PF00005 ABC transporter ALEK_RS12280 PF01180 Dihydroorotate dehydrogenase ALEK_RS12295 PF00701 Dihydrodipicolinate synthetase family ALEK_RS12305 PF01066 CDP-alcohol phosphatidyltransferase ALEK_RS12310 PF17820 PDZ domain ALEK_RS12310 PF02163 Peptidase family M50 ALEK_RS12315 PF01168 Alanine racemase, N-terminal domain ALEK_RS12320 PF01361 Tautomerase enzyme ALEK_RS12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS12335 PF03466 LysR substrate binding domain ALEK_RS12340 PF00989 PAS fold ALEK_RS12340 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12345 PF00218 Indole-3-glycerol phosphate synthase ALEK_RS12355 PF03692 Putative zinc- or iron-chelating domain ALEK_RS12360 PF05175 Methyltransferase small domain ALEK_RS12370 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ALEK_RS12370 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ALEK_RS12370 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ALEK_RS12375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALEK_RS12385 PF02824 TGS domain ALEK_RS12385 PF04607 Region found in RelA / SpoT proteins ALEK_RS12385 PF13291 ACT domain ALEK_RS12390 PF11490 DNA polymerase III polC-type N-terminus II ALEK_RS12390 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALEK_RS12390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALEK_RS12390 PF14579 Helix-hairpin-helix motif ALEK_RS12390 PF02811 PHP domain ALEK_RS12390 PF00929 Exonuclease ALEK_RS12390 PF14480 DNA polymerase III polC-type N-terminus I ALEK_RS12395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ALEK_RS12400 PF00834 Ribulose-phosphate 3 epimerase family ALEK_RS12405 PF02253 Phospholipase A1 ALEK_RS12415 PF00293 NUDIX domain ALEK_RS12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12425 PF00072 Response regulator receiver domain ALEK_RS12425 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS12435 PF04461 Protein of unknown function (DUF520) ALEK_RS12440 PF00860 Permease family ALEK_RS12460 PF04241 Protein of unknown function (DUF423) ALEK_RS12470 PF00156 Phosphoribosyl transferase domain ALEK_RS12475 PF00860 Permease family ALEK_RS12490 PF01883 Iron-sulfur cluster assembly protein ALEK_RS12495 PF00155 Aminotransferase class I and II ALEK_RS12500 PF12833 Helix-turn-helix domain ALEK_RS12500 PF00072 Response regulator receiver domain ALEK_RS12565 PF04055 Radical SAM superfamily ALEK_RS12570 PF01208 Uroporphyrinogen decarboxylase (URO-D) ALEK_RS12580 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALEK_RS12580 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALEK_RS12585 PF03989 DNA gyrase C-terminal domain, beta-propeller ALEK_RS12585 PF00521 DNA gyrase/topoisomerase IV, subunit A ALEK_RS12595 PF01960 ArgJ family ALEK_RS12600 PF07885 Ion channel ALEK_RS12600 PF02254 TrkA-N domain ALEK_RS12605 PF00830 Ribosomal L28 family ALEK_RS12625 PF01370 NAD dependent epimerase/dehydratase family ALEK_RS12630 PF00294 pfkB family carbohydrate kinase ALEK_RS12630 PF01467 Cytidylyltransferase-like ALEK_RS12635 PF13580 SIS domain ALEK_RS12640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ALEK_RS12645 PF00534 Glycosyl transferases group 1 ALEK_RS12645 PF00862 Sucrose synthase ALEK_RS12655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ALEK_RS12660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ALEK_RS12665 PF13439 Glycosyltransferase Family 4 ALEK_RS12665 PF00534 Glycosyl transferases group 1 ALEK_RS12675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALEK_RS12680 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS12685 PF05523 WxcM-like, C-terminal ALEK_RS12690 PF16363 GDP-mannose 4,6 dehydratase ALEK_RS12695 PF00483 Nucleotidyl transferase ALEK_RS12705 PF00535 Glycosyl transferase family 2 ALEK_RS12715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ALEK_RS12725 PF12838 4Fe-4S dicluster domain ALEK_RS12730 PF00459 Inositol monophosphatase family ALEK_RS12735 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS12735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ALEK_RS12740 PF00310 Glutamine amidotransferases class-II ALEK_RS12740 PF04898 Glutamate synthase central domain ALEK_RS12740 PF01645 Conserved region in glutamate synthase ALEK_RS12740 PF01493 GXGXG motif ALEK_RS12745 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS12750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALEK_RS12755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS12765 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ALEK_RS12775 PF13472 GDSL-like Lipase/Acylhydrolase family ALEK_RS12780 PF00005 ABC transporter ALEK_RS12790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALEK_RS12790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS12800 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ALEK_RS12800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALEK_RS12810 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALEK_RS12900 PF12833 Helix-turn-helix domain ALEK_RS12905 PF08447 PAS fold ALEK_RS12905 PF08448 PAS fold ALEK_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12910 PF00196 Bacterial regulatory proteins, luxR family ALEK_RS12910 PF00072 Response regulator receiver domain ALEK_RS12920 PF00082 Subtilase family ALEK_RS12950 PF00293 NUDIX domain ALEK_RS12950 PF13344 Haloacid dehalogenase-like hydrolase ALEK_RS12965 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS12965 PF02743 Cache domain ALEK_RS12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS12970 PF00158 Sigma-54 interaction domain ALEK_RS12970 PF00072 Response regulator receiver domain ALEK_RS12970 PF02954 Bacterial regulatory protein, Fis family ALEK_RS13065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ALEK_RS13070 PF01029 NusB family ALEK_RS13075 PF00885 6,7-dimethyl-8-ribityllumazine synthase ALEK_RS13080 PF00793 DAHP synthetase I family ALEK_RS13095 PF01645 Conserved region in glutamate synthase ALEK_RS13105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALEK_RS13135 PF00437 Type II/IV secretion system protein ALEK_RS13140 PF00263 Bacterial type II and III secretion system protein ALEK_RS13140 PF03958 Bacterial type II/III secretion system short domain ALEK_RS13180 PF08334 Type II secretion system (T2SS), protein G ALEK_RS13180 PF07963 Prokaryotic N-terminal methylation motif ALEK_RS13185 PF09186 Domain of unknown function (DUF1949) ALEK_RS13185 PF01205 Uncharacterized protein family UPF0029 ALEK_RS13190 PF01479 S4 domain ALEK_RS13190 PF01728 FtsJ-like methyltransferase ALEK_RS13200 PF13649 Methyltransferase domain ALEK_RS13205 PF00578 AhpC/TSA family ALEK_RS13215 PF02913 FAD linked oxidases, C-terminal domain ALEK_RS13215 PF01565 FAD binding domain ALEK_RS13255 PF01048 Phosphorylase superfamily ALEK_RS13260 PF00698 Acyl transferase domain ALEK_RS13265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALEK_RS13280 PF04052 TolB amino-terminal domain ALEK_RS13290 PF02472 Biopolymer transport protein ExbD/TolR ALEK_RS13295 PF01618 MotA/TolQ/ExbB proton channel family ALEK_RS13300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ALEK_RS13305 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALEK_RS13305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALEK_RS13310 PF00231 ATP synthase ALEK_RS13315 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALEK_RS13315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALEK_RS13315 PF00306 ATP synthase alpha/beta chain, C terminal domain ALEK_RS13320 PF00213 ATP synthase delta (OSCP) subunit ALEK_RS13325 PF00430 ATP synthase B/B' CF(0) ALEK_RS13335 PF17762 HTH domain found in ParB protein ALEK_RS13335 PF02195 ParB-like nuclease domain ALEK_RS13340 PF13614 AAA domain ALEK_RS13355 PF00551 Formyl transferase ALEK_RS13355 PF02911 Formyl transferase, C-terminal domain ALEK_RS13360 PF00696 Amino acid kinase family ALEK_RS13365 PF01926 50S ribosome-binding GTPase ALEK_RS13365 PF01018 GTP1/OBG ALEK_RS13370 PF01016 Ribosomal L27 protein ALEK_RS13375 PF00829 Ribosomal prokaryotic L21 protein ALEK_RS13380 PF01042 Endoribonuclease L-PSP ALEK_RS13385 PF13662 Toprim domain ALEK_RS13385 PF16730 DnaG-primase C-terminal, helicase-binding domain ALEK_RS13385 PF08275 DNA primase catalytic core, N-terminal domain ALEK_RS13385 PF01807 CHC2 zinc finger ALEK_RS13395 PF14622 Ribonuclease-III-like ALEK_RS13395 PF00035 Double-stranded RNA binding motif ALEK_RS13400 PF01264 Chorismate synthase ALEK_RS13405 PF01435 Peptidase family M48 ALEK_RS13410 PF00300 Histidine phosphatase superfamily (branch 1) ALEK_RS13425 PF01926 50S ribosome-binding GTPase ALEK_RS13425 PF10396 GTP-binding protein TrmE N-terminus ALEK_RS13425 PF12631 MnmE helical domain ALEK_RS13435 PF02096 60Kd inner membrane protein ALEK_RS13435 PF14849 YidC periplasmic domain ALEK_RS13440 PF01809 Putative membrane protein insertion efficiency factor ALEK_RS13445 PF00825 Ribonuclease P ALEK_RS13450 PF00468 Ribosomal protein L34 ALEK_RS13455 PF08448 PAS fold ALEK_RS13455 PF08447 PAS fold ALEK_RS13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13460 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS13460 PF10431 C-terminal, D2-small domain, of ClpB protein ALEK_RS13460 PF02861 Clp amino terminal domain, pathogenicity island component ALEK_RS13460 PF17871 AAA lid domain ALEK_RS13460 PF07724 AAA domain (Cdc48 subfamily) ALEK_RS13465 PF08447 PAS fold ALEK_RS13465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13465 PF08448 PAS fold ALEK_RS13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13475 PF08448 PAS fold ALEK_RS13475 PF08447 PAS fold ALEK_RS13480 PF01351 Ribonuclease HII ALEK_RS13495 PF01625 Peptide methionine sulfoxide reductase ALEK_RS13500 PF01641 SelR domain ALEK_RS13505 PF00072 Response regulator receiver domain ALEK_RS13510 PF00072 Response regulator receiver domain ALEK_RS13515 PF09308 LuxQ, periplasmic ALEK_RS13515 PF00072 Response regulator receiver domain ALEK_RS13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13515 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS13520 PF01645 Conserved region in glutamate synthase ALEK_RS13525 PF07681 DoxX ALEK_RS13530 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALEK_RS13540 PF07681 DoxX ALEK_RS13555 PF00202 Aminotransferase class-III ALEK_RS13560 PF08448 PAS fold ALEK_RS13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13560 PF08447 PAS fold ALEK_RS13585 PF01808 AICARFT/IMPCHase bienzyme ALEK_RS13585 PF02142 MGS-like domain ALEK_RS13600 PF18793 Nitrous oxide reductase propeller repeat 2 ALEK_RS13600 PF18764 Nitrous oxide reductase propeller repeat ALEK_RS13600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALEK_RS13615 PF12800 4Fe-4S binding domain ALEK_RS13615 PF12838 4Fe-4S dicluster domain ALEK_RS13625 PF00034 Cytochrome c ALEK_RS13630 PF13237 4Fe-4S dicluster domain ALEK_RS13630 PF12801 4Fe-4S binding domain ALEK_RS13635 PF00005 ABC transporter ALEK_RS13645 PF00586 AIR synthase related protein, N-terminal domain ALEK_RS13645 PF02769 AIR synthase related protein, C-terminal domain ALEK_RS13645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ALEK_RS13650 PF01551 Peptidase family M23 ALEK_RS13655 PF03448 MgtE intracellular N domain ALEK_RS13655 PF01769 Divalent cation transporter ALEK_RS13655 PF00571 CBS domain ALEK_RS13665 PF01227 GTP cyclohydrolase I ALEK_RS13675 PF00437 Type II/IV secretion system protein ALEK_RS13690 PF07650 KH domain ALEK_RS13690 PF01926 50S ribosome-binding GTPase ALEK_RS13695 PF13335 Magnesium chelatase, subunit ChlI C-terminal ALEK_RS13695 PF01078 Magnesium chelatase, subunit ChlI ALEK_RS13700 PF00672 HAMP domain ALEK_RS13700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS13700 PF02203 Tar ligand binding domain homologue ALEK_RS13705 PF08447 PAS fold ALEK_RS13705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS13715 PF01327 Polypeptide deformylase ALEK_RS13720 PF00574 Clp protease ALEK_RS13725 PF05697 Bacterial trigger factor protein (TF) ALEK_RS13725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALEK_RS13725 PF05698 Bacterial trigger factor protein (TF) C-terminus ALEK_RS13730 PF07584 Aerotolerance regulator N-terminal ALEK_RS13730 PF00092 von Willebrand factor type A domain ALEK_RS13735 PF03976 Polyphosphate kinase 2 (PPK2) ALEK_RS13740 PF03976 Polyphosphate kinase 2 (PPK2) ALEK_RS13745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALEK_RS13750 PF00301 Rubredoxin ALEK_RS13755 PF16653 Saccharopine dehydrogenase C-terminal domain ALEK_RS13755 PF03435 Saccharopine dehydrogenase NADP binding domain ALEK_RS13835 PF00672 HAMP domain ALEK_RS13835 PF02203 Tar ligand binding domain homologue ALEK_RS13835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS13840 PF08447 PAS fold ALEK_RS13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS13845 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS13845 PF00072 Response regulator receiver domain ALEK_RS13850 PF08448 PAS fold ALEK_RS13850 PF08447 PAS fold ALEK_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS13880 PF00258 Flavodoxin ALEK_RS13885 PF01475 Ferric uptake regulator family ALEK_RS13930 PF02421 Ferrous iron transport protein B ALEK_RS13930 PF07664 Ferrous iron transport protein B C terminus ALEK_RS13930 PF07670 Nucleoside recognition ALEK_RS13935 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS13940 PF01475 Ferric uptake regulator family ALEK_RS13960 PF04377 Arginine-tRNA-protein transferase, C terminus ALEK_RS13960 PF04376 Arginine-tRNA-protein transferase, N terminus ALEK_RS13965 PF00290 Tryptophan synthase alpha chain ALEK_RS13970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALEK_RS13970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALEK_RS13970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALEK_RS13970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALEK_RS13975 PF02548 Ketopantoate hydroxymethyltransferase ALEK_RS13980 PF17864 RuvB AAA lid domain ALEK_RS13980 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALEK_RS13980 PF05491 RuvB C-terminal winged helix domain ALEK_RS13985 PF01594 AI-2E family transporter ALEK_RS14000 PF09905 DNA-binding protein VF530 ALEK_RS14015 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS14015 PF00072 Response regulator receiver domain ALEK_RS14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS14030 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALEK_RS14040 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS14040 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS14045 PF02861 Clp amino terminal domain, pathogenicity island component ALEK_RS14045 PF17871 AAA lid domain ALEK_RS14045 PF07724 AAA domain (Cdc48 subfamily) ALEK_RS14045 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS14045 PF10431 C-terminal, D2-small domain, of ClpB protein ALEK_RS14050 PF02617 ATP-dependent Clp protease adaptor protein ClpS ALEK_RS14065 PF00501 AMP-binding enzyme ALEK_RS14065 PF13193 AMP-binding enzyme C-terminal domain ALEK_RS14070 PF01575 MaoC like domain ALEK_RS14110 PF00672 HAMP domain ALEK_RS14110 PF02203 Tar ligand binding domain homologue ALEK_RS14110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS14120 PF01613 Flavin reductase like domain ALEK_RS14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS14125 PF08448 PAS fold ALEK_RS14125 PF13426 PAS domain ALEK_RS14125 PF00072 Response regulator receiver domain ALEK_RS14125 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS14155 PF00771 FHIPEP family ALEK_RS14160 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS14160 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS14165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALEK_RS14165 PF18269 T3SS EscN ATPase C-terminal domain ALEK_RS14175 PF01312 FlhB HrpN YscU SpaS Family ALEK_RS14190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALEK_RS14190 PF00460 Flagella basal body rod protein ALEK_RS14195 PF02049 Flagellar hook-basal body complex protein FliE ALEK_RS14205 PF10609 NUBPL iron-transfer P-loop NTPase ALEK_RS14210 PF00448 SRP54-type protein, GTPase domain ALEK_RS14235 PF01618 MotA/TolQ/ExbB proton channel family ALEK_RS14240 PF16973 Flagellar motor switch protein FliN N-terminal ALEK_RS14240 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ALEK_RS14260 PF07559 Flagellar basal body protein FlaE ALEK_RS14260 PF00460 Flagella basal body rod protein ALEK_RS14260 PF07196 Flagellin hook IN motif ALEK_RS14260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALEK_RS14265 PF07559 Flagellar basal body protein FlaE ALEK_RS14265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALEK_RS14265 PF00460 Flagella basal body rod protein ALEK_RS14285 PF14842 FliG N-terminal domain ALEK_RS14285 PF14841 FliG middle domain ALEK_RS14285 PF01706 FliG C-terminal domain ALEK_RS14290 PF08345 Flagellar M-ring protein C-terminal ALEK_RS14290 PF01514 Secretory protein of YscJ/FliF family ALEK_RS14295 PF00460 Flagella basal body rod protein ALEK_RS14300 PF00460 Flagella basal body rod protein ALEK_RS14300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALEK_RS14310 PF00072 Response regulator receiver domain ALEK_RS14315 PF00460 Flagella basal body rod protein ALEK_RS14315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALEK_RS14330 PF01782 RimM N-terminal domain ALEK_RS14340 PF00886 Ribosomal protein S16 ALEK_RS14345 PF00448 SRP54-type protein, GTPase domain ALEK_RS14345 PF02881 SRP54-type protein, helical bundle domain ALEK_RS14345 PF02978 Signal peptide binding domain ALEK_RS14350 PF00849 RNA pseudouridylate synthase ALEK_RS14350 PF01479 S4 domain ALEK_RS14355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ALEK_RS14355 PF02390 Putative methyltransferase ALEK_RS14365 PF01784 NIF3 (NGG1p interacting factor 3) ALEK_RS14370 PF02091 Glycyl-tRNA synthetase alpha subunit ALEK_RS14375 PF00731 AIR carboxylase ALEK_RS14455 PF00174 Oxidoreductase molybdopterin binding domain ALEK_RS14460 PF13476 AAA domain ALEK_RS14465 PF01513 ATP-NAD kinase ALEK_RS14470 PF00009 Elongation factor Tu GTP binding domain ALEK_RS14470 PF03144 Elongation factor Tu domain 2 ALEK_RS14470 PF03764 Elongation factor G, domain IV ALEK_RS14470 PF14492 Elongation Factor G, domain II ALEK_RS14470 PF00679 Elongation factor G C-terminus ALEK_RS14475 PF00177 Ribosomal protein S7p/S5e ALEK_RS14480 PF00164 Ribosomal protein S12/S23 ALEK_RS14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALEK_RS14490 PF03466 LysR substrate binding domain ALEK_RS14495 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS14500 PF03480 Bacterial extracellular solute-binding protein, family 7 ALEK_RS14510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALEK_RS14515 PF00561 alpha/beta hydrolase fold ALEK_RS14520 PF01042 Endoribonuclease L-PSP ALEK_RS14525 PF03601 Conserved hypothetical protein 698 ALEK_RS14530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ALEK_RS14540 PF09962 Uncharacterized conserved protein (DUF2196) ALEK_RS14550 PF00654 Voltage gated chloride channel ALEK_RS14560 PF00672 HAMP domain ALEK_RS14560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS14560 PF02203 Tar ligand binding domain homologue ALEK_RS14575 PF13426 PAS domain ALEK_RS14575 PF00563 EAL domain ALEK_RS14575 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS14585 PF04997 RNA polymerase Rpb1, domain 1 ALEK_RS14585 PF04998 RNA polymerase Rpb1, domain 5 ALEK_RS14585 PF05000 RNA polymerase Rpb1, domain 4 ALEK_RS14585 PF04983 RNA polymerase Rpb1, domain 3 ALEK_RS14585 PF00623 RNA polymerase Rpb1, domain 2 ALEK_RS14590 PF04561 RNA polymerase Rpb2, domain 2 ALEK_RS14590 PF10385 RNA polymerase beta subunit external 1 domain ALEK_RS14590 PF00562 RNA polymerase Rpb2, domain 6 ALEK_RS14590 PF04565 RNA polymerase Rpb2, domain 3 ALEK_RS14590 PF04563 RNA polymerase beta subunit ALEK_RS14590 PF04560 RNA polymerase Rpb2, domain 7 ALEK_RS14595 PF00542 Ribosomal protein L7/L12 C-terminal domain ALEK_RS14595 PF16320 Ribosomal protein L7/L12 dimerisation domain ALEK_RS14600 PF00466 Ribosomal protein L10 ALEK_RS14605 PF00687 Ribosomal protein L1p/L10e family ALEK_RS14610 PF00298 Ribosomal protein L11, RNA binding domain ALEK_RS14610 PF03946 Ribosomal protein L11, N-terminal domain ALEK_RS14615 PF02357 Transcription termination factor nusG ALEK_RS14630 PF00471 Ribosomal protein L33 ALEK_RS14635 PF03143 Elongation factor Tu C-terminal domain ALEK_RS14635 PF00009 Elongation factor Tu GTP binding domain ALEK_RS14635 PF03144 Elongation factor Tu domain 2 ALEK_RS14660 PF08245 Mur ligase middle domain ALEK_RS14665 PF00953 Glycosyl transferase family 4 ALEK_RS14665 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ALEK_RS14670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ALEK_RS14670 PF01676 Metalloenzyme superfamily ALEK_RS14675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALEK_RS14675 PF00005 ABC transporter ALEK_RS14680 PF00912 Transglycosylase ALEK_RS14680 PF00905 Penicillin binding protein transpeptidase domain ALEK_RS14685 PF00120 Glutamine synthetase, catalytic domain ALEK_RS14685 PF03951 Glutamine synthetase, beta-Grasp domain ALEK_RS14695 PF02391 MoaE protein ALEK_RS14705 PF02621 Menaquinone biosynthesis ALEK_RS14710 PF02673 Bacitracin resistance protein BacA ALEK_RS14715 PF04101 Glycosyltransferase family 28 C-terminal domain ALEK_RS14715 PF03033 Glycosyltransferase family 28 N-terminal domain ALEK_RS14720 PF01098 Cell cycle protein ALEK_RS14730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALEK_RS14775 PF00117 Glutamine amidotransferase class-I ALEK_RS14785 PF13416 Bacterial extracellular solute-binding protein ALEK_RS14795 PF00005 ABC transporter ALEK_RS14795 PF08402 TOBE domain ALEK_RS14800 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS14805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ALEK_RS14810 PF00155 Aminotransferase class I and II ALEK_RS14815 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ALEK_RS14820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALEK_RS14825 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ALEK_RS14825 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ALEK_RS14835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ALEK_RS14835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALEK_RS14835 PF10531 SLBB domain ALEK_RS14840 PF00285 Citrate synthase, C-terminal domain ALEK_RS14845 PF00384 Molybdopterin oxidoreductase ALEK_RS14845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALEK_RS14845 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ALEK_RS14850 PF00146 NADH dehydrogenase ALEK_RS14855 PF12838 4Fe-4S dicluster domain ALEK_RS14860 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ALEK_RS14865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALEK_RS14870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALEK_RS14870 PF00361 Proton-conducting membrane transporter ALEK_RS14875 PF00361 Proton-conducting membrane transporter ALEK_RS14875 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ALEK_RS14880 PF00361 Proton-conducting membrane transporter ALEK_RS14885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALEK_RS14890 PF02910 Fumarate reductase flavoprotein C-term ALEK_RS14890 PF00890 FAD binding domain ALEK_RS14895 PF13183 4Fe-4S dicluster domain ALEK_RS14895 PF13085 2Fe-2S iron-sulfur cluster binding domain ALEK_RS14900 PF00350 Dynamin family ALEK_RS14905 PF00350 Dynamin family ALEK_RS14910 PF13673 Acetyltransferase (GNAT) domain ALEK_RS14910 PF00958 GMP synthase C terminal domain ALEK_RS14910 PF00117 Glutamine amidotransferase class-I ALEK_RS14910 PF03352 Methyladenine glycosylase ALEK_RS14910 PF13302 Acetyltransferase (GNAT) domain ALEK_RS14915 PF01863 Protein of unknown function DUF45 ALEK_RS14920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS14920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALEK_RS14940 PF17674 HHH domain ALEK_RS14940 PF00575 S1 RNA binding domain ALEK_RS14940 PF16921 Tex protein YqgF-like domain ALEK_RS14940 PF09371 Tex-like protein N-terminal domain ALEK_RS14960 PF01042 Endoribonuclease L-PSP ALEK_RS14975 PF01914 MarC family integral membrane protein ALEK_RS14980 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS14985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS14990 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS14995 PF00005 ABC transporter ALEK_RS15010 PF13649 Methyltransferase domain ALEK_RS15015 PF01022 Bacterial regulatory protein, arsR family ALEK_RS15025 PF00186 Dihydrofolate reductase ALEK_RS15030 PF00303 Thymidylate synthase ALEK_RS15040 PF00593 TonB dependent receptor ALEK_RS15040 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS15060 PF16124 RecQ zinc-binding ALEK_RS15060 PF00570 HRDC domain ALEK_RS15060 PF00271 Helicase conserved C-terminal domain ALEK_RS15060 PF00270 DEAD/DEAH box helicase ALEK_RS15060 PF09382 RQC domain ALEK_RS15070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALEK_RS15070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALEK_RS15100 PF00285 Citrate synthase, C-terminal domain ALEK_RS15105 PF00694 Aconitase C-terminal domain ALEK_RS15105 PF00330 Aconitase family (aconitate hydratase) ALEK_RS15110 PF04303 PrpF protein ALEK_RS15115 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS15115 PF13185 GAF domain ALEK_RS15120 PF08448 PAS fold ALEK_RS15120 PF08447 PAS fold ALEK_RS15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15125 PF13407 Periplasmic binding protein domain ALEK_RS15135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ALEK_RS15135 PF03900 Porphobilinogen deaminase, C-terminal domain ALEK_RS15150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ALEK_RS15150 PF12170 DNA polymerase III tau subunit V interacting with alpha ALEK_RS15150 PF12169 DNA polymerase III subunits gamma and tau domain III ALEK_RS15155 PF01177 Asp/Glu/Hydantoin racemase ALEK_RS15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15165 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS15170 PF03180 NLPA lipoprotein ALEK_RS15175 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS15180 PF09383 NIL domain ALEK_RS15180 PF00005 ABC transporter ALEK_RS15185 PF07497 Rho termination factor, RNA-binding domain ALEK_RS15185 PF07498 Rho termination factor, N-terminal domain ALEK_RS15185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALEK_RS15190 PF00578 AhpC/TSA family ALEK_RS15190 PF10417 C-terminal domain of 1-Cys peroxiredoxin ALEK_RS15195 PF00037 4Fe-4S binding domain ALEK_RS15200 PF00334 Nucleoside diphosphate kinase ALEK_RS15210 PF01783 Ribosomal L32p protein family ALEK_RS15215 PF02504 Fatty acid synthesis protein ALEK_RS15220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALEK_RS15220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALEK_RS15225 PF08448 PAS fold ALEK_RS15225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15225 PF08447 PAS fold ALEK_RS15230 PF00072 Response regulator receiver domain ALEK_RS15230 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS15235 PF04264 YceI-like domain ALEK_RS15250 PF03591 AzlC protein ALEK_RS15280 PF00072 Response regulator receiver domain ALEK_RS15280 PF01339 CheB methylesterase ALEK_RS15290 PF00425 chorismate binding enzyme ALEK_RS15295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALEK_RS15295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALEK_RS15305 PF00202 Aminotransferase class-III ALEK_RS15315 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS15315 PF00989 PAS fold ALEK_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15320 PF00391 PEP-utilising enzyme, mobile domain ALEK_RS15320 PF00224 Pyruvate kinase, barrel domain ALEK_RS15320 PF02887 Pyruvate kinase, alpha/beta domain ALEK_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15340 PF00072 Response regulator receiver domain ALEK_RS15340 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS15345 PF05690 Thiazole biosynthesis protein ThiG ALEK_RS15345 PF02597 ThiS family ALEK_RS15350 PF02021 Uncharacterised protein family UPF0102 ALEK_RS15355 PF02254 TrkA-N domain ALEK_RS15355 PF00999 Sodium/hydrogen exchanger family ALEK_RS15365 PF12833 Helix-turn-helix domain ALEK_RS15365 PF02311 AraC-like ligand binding domain ALEK_RS15370 PF00155 Aminotransferase class I and II ALEK_RS15380 PF00484 Carbonic anhydrase ALEK_RS15390 PF04055 Radical SAM superfamily ALEK_RS15400 PF04028 Domain of unknown function (DUF374) ALEK_RS15405 PF04055 Radical SAM superfamily ALEK_RS15405 PF00919 Uncharacterized protein family UPF0004 ALEK_RS15405 PF01938 TRAM domain ALEK_RS15415 PF13184 NusA-like KH domain ALEK_RS15415 PF08529 NusA N-terminal domain ALEK_RS15420 PF01406 tRNA synthetases class I (C) catalytic domain ALEK_RS15420 PF09190 DALR domain ALEK_RS15425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALEK_RS15425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS15435 PF01084 Ribosomal protein S18 ALEK_RS15440 PF00436 Single-strand binding protein family ALEK_RS15445 PF01250 Ribosomal protein S6 ALEK_RS15455 PF02623 FliW protein ALEK_RS15470 PF17876 Cold shock domain ALEK_RS15470 PF08461 Ribonuclease R winged-helix domain ALEK_RS15470 PF08206 Ribonuclease B OB domain ALEK_RS15470 PF00773 RNB domain ALEK_RS15470 PF00575 S1 RNA binding domain ALEK_RS15485 PF08448 PAS fold ALEK_RS15485 PF08447 PAS fold ALEK_RS15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ALEK_RS15490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ALEK_RS15510 PF02311 AraC-like ligand binding domain ALEK_RS15510 PF12833 Helix-turn-helix domain ALEK_RS15515 PF06965 Na+/H+ antiporter 1 ALEK_RS15520 PF02875 Mur ligase family, glutamate ligase domain ALEK_RS15520 PF08245 Mur ligase middle domain ALEK_RS15520 PF01225 Mur ligase family, catalytic domain ALEK_RS15530 PF00155 Aminotransferase class I and II ALEK_RS15540 PF08448 PAS fold ALEK_RS15540 PF08447 PAS fold ALEK_RS15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15550 PF08448 PAS fold ALEK_RS15550 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS15555 PF01702 Queuine tRNA-ribosyltransferase ALEK_RS15560 PF03958 Bacterial type II/III secretion system short domain ALEK_RS15560 PF00263 Bacterial type II and III secretion system protein ALEK_RS15585 PF00437 Type II/IV secretion system protein ALEK_RS15610 PF00360 Phytochrome region ALEK_RS15610 PF00563 EAL domain ALEK_RS15610 PF01590 GAF domain ALEK_RS15610 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS15620 PF02686 Glu-tRNAGln amidotransferase C subunit ALEK_RS15630 PF01474 Class-II DAHP synthetase family ALEK_RS15635 PF00923 Transaldolase/Fructose-6-phosphate aldolase ALEK_RS15645 PF03652 Holliday junction resolvase ALEK_RS15655 PF11849 Domain of unknown function (DUF3369) ALEK_RS15660 PF01648 4'-phosphopantetheinyl transferase superfamily ALEK_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS15670 PF02569 Pantoate-beta-alanine ligase ALEK_RS15680 PF04264 YceI-like domain ALEK_RS15685 PF00919 Uncharacterized protein family UPF0004 ALEK_RS15685 PF18693 TRAM domain ALEK_RS15685 PF04055 Radical SAM superfamily ALEK_RS15690 PF01171 PP-loop family ALEK_RS15705 PF07196 Flagellin hook IN motif ALEK_RS15705 PF02465 Flagellar hook-associated protein 2 N-terminus ALEK_RS15705 PF07195 Flagellar hook-associated protein 2 C-terminus ALEK_RS15715 PF02107 Flagellar L-ring protein ALEK_RS15740 PF01313 Bacterial export proteins, family 3 ALEK_RS15750 PF02119 Flagellar P-ring protein ALEK_RS15755 PF02154 Flagellar motor switch protein FliM ALEK_RS15755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ALEK_RS15760 PF04909 Amidohydrolase ALEK_RS15765 PF00543 Nitrogen regulatory protein P-II ALEK_RS15770 PF00909 Ammonium Transporter Family ALEK_RS15775 PF00543 Nitrogen regulatory protein P-II ALEK_RS15780 PF00909 Ammonium Transporter Family ALEK_RS15785 PF00672 HAMP domain ALEK_RS15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS15785 PF02203 Tar ligand binding domain homologue ALEK_RS15790 PF00563 EAL domain ALEK_RS15790 PF12792 CSS motif domain associated with EAL ALEK_RS15795 PF00005 ABC transporter ALEK_RS15800 PF00528 Binding-protein-dependent transport system inner membrane component ALEK_RS15805 PF00005 ABC transporter ALEK_RS15810 PF07690 Major Facilitator Superfamily ALEK_RS15815 PF03793 PASTA domain ALEK_RS15815 PF00069 Protein kinase domain ALEK_RS15820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS15820 PF00384 Molybdopterin oxidoreductase ALEK_RS15820 PF01568 Molydopterin dinucleotide binding domain ALEK_RS15830 PF13247 4Fe-4S dicluster domain ALEK_RS15835 PF01568 Molydopterin dinucleotide binding domain ALEK_RS15835 PF04324 BFD-like [2Fe-2S] binding domain ALEK_RS15835 PF00384 Molybdopterin oxidoreductase ALEK_RS15835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALEK_RS15855 PF04172 LrgB-like family ALEK_RS15860 PF03788 LrgA family ALEK_RS15865 PF18267 Rubredoxin NAD+ reductase C-terminal domain ALEK_RS15865 PF04324 BFD-like [2Fe-2S] binding domain ALEK_RS15865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS15865 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS15865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALEK_RS15885 PF08448 PAS fold ALEK_RS15885 PF08447 PAS fold ALEK_RS15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15895 PF01966 HD domain ALEK_RS15895 PF08335 GlnD PII-uridylyltransferase ALEK_RS15900 PF13193 AMP-binding enzyme C-terminal domain ALEK_RS15900 PF01553 Acyltransferase ALEK_RS15900 PF00501 AMP-binding enzyme ALEK_RS15910 PF00892 EamA-like transporter family ALEK_RS15915 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS15915 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALEK_RS15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15920 PF02374 Anion-transporting ATPase ALEK_RS15925 PF06953 Arsenical resistance operon trans-acting repressor ArsD ALEK_RS15930 PF01451 Low molecular weight phosphotyrosine protein phosphatase ALEK_RS15935 PF00072 Response regulator receiver domain ALEK_RS15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS15940 PF02659 Putative manganese efflux pump ALEK_RS15945 PF02040 Arsenical pump membrane protein ALEK_RS15955 PF01022 Bacterial regulatory protein, arsR family ALEK_RS15960 PF03475 3-alpha domain ALEK_RS15960 PF03473 MOSC domain ALEK_RS15965 PF04172 LrgB-like family ALEK_RS15975 PF08348 YheO-like PAS domain ALEK_RS15975 PF13309 HTH domain ALEK_RS15985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALEK_RS15985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALEK_RS16000 PF00456 Transketolase, thiamine diphosphate binding domain ALEK_RS16000 PF02780 Transketolase, C-terminal domain ALEK_RS16000 PF02779 Transketolase, pyrimidine binding domain ALEK_RS16005 PF00989 PAS fold ALEK_RS16005 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS16025 PF00664 ABC transporter transmembrane region ALEK_RS16025 PF00005 ABC transporter ALEK_RS16025 PF03412 Peptidase C39 family ALEK_RS16035 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS16035 PF00072 Response regulator receiver domain ALEK_RS16070 PF00920 Dehydratase family ALEK_RS16075 PF13180 PDZ domain ALEK_RS16075 PF17820 PDZ domain ALEK_RS16080 PF00072 Response regulator receiver domain ALEK_RS16080 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS16095 PF03186 CobD/Cbib protein ALEK_RS16100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALEK_RS16100 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALEK_RS16105 PF11849 Domain of unknown function (DUF3369) ALEK_RS16130 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS16140 PF00155 Aminotransferase class I and II ALEK_RS16140 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALEK_RS16140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALEK_RS16145 PF02654 Cobalamin-5-phosphate synthase ALEK_RS16155 PF01914 MarC family integral membrane protein ALEK_RS16160 PF02277 Phosphoribosyltransferase ALEK_RS16165 PF02683 Cytochrome C biogenesis protein transmembrane region ALEK_RS16165 PF11412 Disulphide bond corrector protein DsbC ALEK_RS16165 PF00085 Thioredoxin ALEK_RS16170 PF00085 Thioredoxin ALEK_RS16175 PF00581 Rhodanese-like domain ALEK_RS16185 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS16185 PF10442 FIST C domain ALEK_RS16185 PF00563 EAL domain ALEK_RS16185 PF08495 FIST N domain ALEK_RS16190 PF02666 Phosphatidylserine decarboxylase ALEK_RS16200 PF06725 3D domain ALEK_RS16200 PF03562 MltA specific insert domain ALEK_RS16210 PF00012 Hsp70 protein ALEK_RS16215 PF01025 GrpE ALEK_RS16220 PF01628 HrcA protein C terminal domain ALEK_RS16225 PF16868 NMT1-like family ALEK_RS16235 PF00072 Response regulator receiver domain ALEK_RS16235 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS16240 PF08447 PAS fold ALEK_RS16240 PF08448 PAS fold ALEK_RS16245 PF01416 tRNA pseudouridine synthase ALEK_RS16255 PF01478 Type IV leader peptidase family ALEK_RS16255 PF06750 Bacterial Peptidase A24 N-terminal domain ALEK_RS16260 PF01255 Putative undecaprenyl diphosphate synthase ALEK_RS16265 PF04127 DNA / pantothenate metabolism flavoprotein ALEK_RS16265 PF02441 Flavoprotein ALEK_RS16270 PF14602 Hexapeptide repeat of succinyl-transferase ALEK_RS16270 PF12804 MobA-like NTP transferase domain ALEK_RS16280 PF00271 Helicase conserved C-terminal domain ALEK_RS16280 PF00270 DEAD/DEAH box helicase ALEK_RS16285 PF05958 tRNA (Uracil-5-)-methyltransferase ALEK_RS16290 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16290 PF07196 Flagellin hook IN motif ALEK_RS16290 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16295 PF07196 Flagellin hook IN motif ALEK_RS16295 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16295 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16300 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16300 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16300 PF07196 Flagellin hook IN motif ALEK_RS16305 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16305 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16305 PF07196 Flagellin hook IN motif ALEK_RS16310 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16310 PF07196 Flagellin hook IN motif ALEK_RS16310 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16315 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16315 PF07196 Flagellin hook IN motif ALEK_RS16315 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16320 PF07196 Flagellin hook IN motif ALEK_RS16320 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16320 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16325 PF07196 Flagellin hook IN motif ALEK_RS16325 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16325 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16330 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16330 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16330 PF07196 Flagellin hook IN motif ALEK_RS16335 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16335 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16335 PF07196 Flagellin hook IN motif ALEK_RS16340 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16340 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16340 PF07196 Flagellin hook IN motif ALEK_RS16345 PF00700 Bacterial flagellin C-terminal helical region ALEK_RS16345 PF07196 Flagellin hook IN motif ALEK_RS16345 PF00669 Bacterial flagellin N-terminal helical region ALEK_RS16365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALEK_RS16375 PF02348 Cytidylyltransferase ALEK_RS16385 PF02348 Cytidylyltransferase ALEK_RS16395 PF01425 Amidase ALEK_RS16405 PF03102 NeuB family ALEK_RS16405 PF08666 SAF domain ALEK_RS16415 PF02719 Polysaccharide biosynthesis protein ALEK_RS16425 PF00154 recA bacterial DNA recombination protein ALEK_RS16430 PF00113 Enolase, C-terminal TIM barrel domain ALEK_RS16430 PF03952 Enolase, N-terminal domain ALEK_RS16445 PF02254 TrkA-N domain ALEK_RS16445 PF00999 Sodium/hydrogen exchanger family ALEK_RS16445 PF02080 TrkA-C domain ALEK_RS16450 PF06968 Biotin and Thiamin Synthesis associated domain ALEK_RS16450 PF04055 Radical SAM superfamily ALEK_RS16460 PF01131 DNA topoisomerase ALEK_RS16460 PF13368 Topoisomerase C-terminal repeat ALEK_RS16460 PF01751 Toprim domain ALEK_RS16465 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ALEK_RS16470 PF02621 Menaquinone biosynthesis ALEK_RS16480 PF00361 Proton-conducting membrane transporter ALEK_RS16485 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ALEK_RS16485 PF00361 Proton-conducting membrane transporter ALEK_RS16490 PF00361 Proton-conducting membrane transporter ALEK_RS16490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALEK_RS16495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALEK_RS16500 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ALEK_RS16505 PF12838 4Fe-4S dicluster domain ALEK_RS16510 PF00146 NADH dehydrogenase ALEK_RS16515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALEK_RS16515 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ALEK_RS16515 PF00384 Molybdopterin oxidoreductase ALEK_RS16530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ALEK_RS16535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ALEK_RS16540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALEK_RS16545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ALEK_RS16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS16550 PF02203 Tar ligand binding domain homologue ALEK_RS16550 PF00672 HAMP domain ALEK_RS16560 PF00004 ATPase family associated with various cellular activities (AAA) ALEK_RS16560 PF16450 Proteasomal ATPase OB C-terminal domain ALEK_RS16560 PF17758 Proteasomal ATPase OB N-terminal domain ALEK_RS16590 PF12161 HsdM N-terminal domain ALEK_RS16590 PF02384 N-6 DNA Methylase ALEK_RS16595 PF12008 Type I restriction and modification enzyme - subunit R C terminal ALEK_RS16595 PF18766 SWI2/SNF2 ATPase ALEK_RS16595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALEK_RS16615 PF12161 HsdM N-terminal domain ALEK_RS16615 PF02384 N-6 DNA Methylase ALEK_RS16640 PF01261 Xylose isomerase-like TIM barrel ALEK_RS16645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALEK_RS16650 PF08495 FIST N domain ALEK_RS16650 PF00563 EAL domain ALEK_RS16650 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS16650 PF10442 FIST C domain ALEK_RS16655 PF00072 Response regulator receiver domain ALEK_RS16655 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS16660 PF00158 Sigma-54 interaction domain ALEK_RS16660 PF00072 Response regulator receiver domain ALEK_RS16660 PF02954 Bacterial regulatory protein, Fis family ALEK_RS16665 PF08448 PAS fold ALEK_RS16665 PF08447 PAS fold ALEK_RS16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS16670 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS16670 PF08448 PAS fold ALEK_RS16685 PF02677 Epoxyqueuosine reductase QueH ALEK_RS16690 PF02684 Lipid-A-disaccharide synthetase ALEK_RS16695 PF07977 FabA-like domain ALEK_RS16700 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ALEK_RS16700 PF00132 Bacterial transferase hexapeptide (six repeats) ALEK_RS16705 PF06689 ClpX C4-type zinc finger ALEK_RS16705 PF10431 C-terminal, D2-small domain, of ClpB protein ALEK_RS16705 PF07724 AAA domain (Cdc48 subfamily) ALEK_RS16720 PF00677 Lumazine binding domain ALEK_RS16725 PF00672 HAMP domain ALEK_RS16725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS16725 PF02203 Tar ligand binding domain homologue ALEK_RS16730 PF01134 Glucose inhibited division protein A ALEK_RS16730 PF13932 GidA associated domain ALEK_RS16740 PF13746 4Fe-4S dicluster domain ALEK_RS16740 PF12801 4Fe-4S binding domain ALEK_RS16740 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALEK_RS16745 PF00117 Glutamine amidotransferase class-I ALEK_RS16745 PF06418 CTP synthase N-terminus ALEK_RS16750 PF02272 DHHA1 domain ALEK_RS16750 PF17768 RecJ OB domain ALEK_RS16750 PF01368 DHH family ALEK_RS16775 PF00211 Adenylate and Guanylate cyclase catalytic domain ALEK_RS16790 PF02811 PHP domain ALEK_RS16790 PF14579 Helix-hairpin-helix motif ALEK_RS16790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALEK_RS16790 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALEK_RS16795 PF01975 Survival protein SurE ALEK_RS16820 PF01967 MoaC family ALEK_RS16825 PF01165 Ribosomal protein S21 ALEK_RS16830 PF08448 PAS fold ALEK_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS16830 PF08447 PAS fold ALEK_RS16865 PF01027 Inhibitor of apoptosis-promoting Bax1 ALEK_RS16870 PF02581 Thiamine monophosphate synthase ALEK_RS16870 PF17792 ThiD2 family ALEK_RS16880 PF03840 Preprotein translocase SecG subunit ALEK_RS16890 PF01765 Ribosome recycling factor ALEK_RS16895 PF00156 Phosphoribosyl transferase domain ALEK_RS16900 PF06271 RDD family ALEK_RS16905 PF12832 MFS_1 like family ALEK_RS16910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALEK_RS16910 PF08447 PAS fold ALEK_RS16915 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS16915 PF08448 PAS fold ALEK_RS16920 PF00072 Response regulator receiver domain ALEK_RS16920 PF00486 Transcriptional regulatory protein, C terminal ALEK_RS16925 PF03883 Peroxide stress protein YaaA ALEK_RS16935 PF02810 SEC-C motif ALEK_RS16960 PF03167 Uracil DNA glycosylase superfamily ALEK_RS16965 PF00171 Aldehyde dehydrogenase family ALEK_RS16970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALEK_RS16970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALEK_RS16970 PF00205 Thiamine pyrophosphate enzyme, central domain ALEK_RS16975 PF13419 Haloacid dehalogenase-like hydrolase ALEK_RS17000 PF00512 His Kinase A (phospho-acceptor) domain ALEK_RS17000 PF00072 Response regulator receiver domain ALEK_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALEK_RS17000 PF08448 PAS fold ALEK_RS17000 PF13426 PAS domain ALEK_RS17035 PF03475 3-alpha domain ALEK_RS17035 PF03473 MOSC domain ALEK_RS17055 PF01053 Cys/Met metabolism PLP-dependent enzyme ALEK_RS17060 PF02082 Transcriptional regulator ALEK_RS17065 PF00291 Pyridoxal-phosphate dependent enzyme ALEK_RS17075 PF01507 Phosphoadenosine phosphosulfate reductase family ALEK_RS17080 PF01507 Phosphoadenosine phosphosulfate reductase family ALEK_RS17085 PF00009 Elongation factor Tu GTP binding domain ALEK_RS17090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALEK_RS17090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALEK_RS17100 PF00149 Calcineurin-like phosphoesterase ALEK_RS17110 PF02805 Metal binding domain of Ada ALEK_RS17110 PF12833 Helix-turn-helix domain ALEK_RS17110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALEK_RS17110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALEK_RS17120 PF04960 Glutaminase ALEK_RS17130 PF07715 TonB-dependent Receptor Plug Domain ALEK_RS17130 PF07660 Secretin and TonB N terminus short domain ALEK_RS17130 PF00593 TonB dependent receptor ALEK_RS17140 PF04542 Sigma-70 region 2 ALEK_RS17140 PF08281 Sigma-70, region 4 ALEK_RS17145 PF13536 Putative multidrug resistance efflux transporter ALEK_RS17150 PF03458 UPF0126 domain ALEK_RS17155 PF00990 Diguanylate cyclase, GGDEF domain ALEK_RS17155 PF01590 GAF domain ALEK_RS17155 PF00360 Phytochrome region ALEK_RS17155 PF00563 EAL domain ALEK_RS17165 PF00551 Formyl transferase ALEK_RS17170 PF02075 Crossover junction endodeoxyribonuclease RuvC