locus-tag class description AMRN_RS00005 PF00308 Bacterial dnaA protein AMRN_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMRN_RS00005 PF11638 DnaA N-terminal domain AMRN_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMRN_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMRN_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMRN_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus AMRN_RS00015 PF01751 Toprim domain AMRN_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00015 PF00204 DNA gyrase B AMRN_RS00035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMRN_RS00045 PF14489 QueF-like protein AMRN_RS00060 PF09335 SNARE associated Golgi protein AMRN_RS00065 PF00989 PAS fold AMRN_RS00065 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00070 PF00849 RNA pseudouridylate synthase AMRN_RS00075 PF00206 Lyase AMRN_RS00075 PF10397 Adenylosuccinate lyase C-terminus AMRN_RS00080 PF00317 Ribonucleotide reductase, all-alpha domain AMRN_RS00080 PF03477 ATP cone domain AMRN_RS00080 PF02867 Ribonucleotide reductase, barrel domain AMRN_RS00085 PF00268 Ribonucleotide reductase, small chain AMRN_RS00095 PF00881 Nitroreductase family AMRN_RS00100 PF00672 HAMP domain AMRN_RS00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00100 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00105 PF03063 Prismane/CO dehydrogenase family AMRN_RS00110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMRN_RS00110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS00125 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMRN_RS00130 PF00795 Carbon-nitrogen hydrolase AMRN_RS00135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMRN_RS00135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMRN_RS00135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMRN_RS00135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMRN_RS00140 PF01810 LysE type translocator AMRN_RS00145 PF00034 Cytochrome c AMRN_RS00145 PF03150 Di-haem cytochrome c peroxidase AMRN_RS00150 PF08448 PAS fold AMRN_RS00150 PF08447 PAS fold AMRN_RS00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00155 PF00072 Response regulator receiver domain AMRN_RS00155 PF12833 Helix-turn-helix domain AMRN_RS00160 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00160 PF02743 Cache domain AMRN_RS00165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMRN_RS00165 PF12833 Helix-turn-helix domain AMRN_RS00165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMRN_RS00165 PF02805 Metal binding domain of Ada AMRN_RS00170 PF00464 Serine hydroxymethyltransferase AMRN_RS00175 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMRN_RS00175 PF13746 4Fe-4S dicluster domain AMRN_RS00175 PF12801 4Fe-4S binding domain AMRN_RS00180 PF00171 Aldehyde dehydrogenase family AMRN_RS00185 PF00085 Thioredoxin AMRN_RS00190 PF01638 HxlR-like helix-turn-helix AMRN_RS00195 PF00107 Zinc-binding dehydrogenase AMRN_RS00195 PF08240 Alcohol dehydrogenase GroES-like domain AMRN_RS00200 PF01638 HxlR-like helix-turn-helix AMRN_RS00205 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMRN_RS00210 PF04055 Radical SAM superfamily AMRN_RS00225 PF00977 Histidine biosynthesis protein AMRN_RS00230 PF00398 Ribosomal RNA adenine dimethylase AMRN_RS00235 PF00753 Metallo-beta-lactamase superfamily AMRN_RS00235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMRN_RS00235 PF17770 Ribonuclease J C-terminal domain AMRN_RS00240 PF00571 CBS domain AMRN_RS00240 PF01380 SIS domain AMRN_RS00245 PF01479 S4 domain AMRN_RS00245 PF00849 RNA pseudouridylate synthase AMRN_RS00250 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMRN_RS00250 PF12002 MgsA AAA+ ATPase C terminal AMRN_RS00250 PF01661 Macro domain AMRN_RS00250 PF16193 AAA C-terminal domain AMRN_RS00255 PF03653 Uncharacterised protein family (UPF0093) AMRN_RS00260 PF02562 PhoH-like protein AMRN_RS00260 PF13638 PIN domain AMRN_RS00265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMRN_RS00265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMRN_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS00275 PF02203 Tar ligand binding domain homologue AMRN_RS00275 PF00672 HAMP domain AMRN_RS00280 PF03480 Bacterial extracellular solute-binding protein, family 7 AMRN_RS00285 PF00881 Nitroreductase family AMRN_RS00295 PF00733 Asparagine synthase AMRN_RS00295 PF13537 Glutamine amidotransferase domain AMRN_RS00305 PF01384 Phosphate transporter family AMRN_RS00315 PF00270 DEAD/DEAH box helicase AMRN_RS00315 PF00271 Helicase conserved C-terminal domain AMRN_RS00320 PF00289 Biotin carboxylase, N-terminal domain AMRN_RS00320 PF02785 Biotin carboxylase C-terminal domain AMRN_RS00320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMRN_RS00325 PF00364 Biotin-requiring enzyme AMRN_RS00340 PF02754 Cysteine-rich domain AMRN_RS00345 PF13183 4Fe-4S dicluster domain AMRN_RS00345 PF02589 LUD domain AMRN_RS00345 PF11870 Domain of unknown function (DUF3390) AMRN_RS00350 PF02589 LUD domain AMRN_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00355 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00355 PF00989 PAS fold AMRN_RS00360 PF00072 Response regulator receiver domain AMRN_RS00360 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 AMRN_RS00375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMRN_RS00380 PF13183 4Fe-4S dicluster domain AMRN_RS00380 PF02913 FAD linked oxidases, C-terminal domain AMRN_RS00380 PF01565 FAD binding domain AMRN_RS00385 PF00639 PPIC-type PPIASE domain AMRN_RS00385 PF09312 SurA N-terminal domain AMRN_RS00390 PF02637 GatB domain AMRN_RS00390 PF02934 GatB/GatE catalytic domain AMRN_RS00395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMRN_RS00395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMRN_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00400 PF08448 PAS fold AMRN_RS00400 PF08447 PAS fold AMRN_RS00405 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS00405 PF00072 Response regulator receiver domain AMRN_RS00415 PF00384 Molybdopterin oxidoreductase AMRN_RS00415 PF18364 Molybdopterin oxidoreductase N-terminal domain AMRN_RS00415 PF01568 Molydopterin dinucleotide binding domain AMRN_RS00420 PF02001 Protein of unknown function DUF134 AMRN_RS00450 PF03649 Uncharacterised protein family (UPF0014) AMRN_RS00455 PF00072 Response regulator receiver domain AMRN_RS00455 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS00465 PF00873 AcrB/AcrD/AcrF family AMRN_RS00470 PF00529 HlyD membrane-fusion protein of T1SS AMRN_RS00470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMRN_RS00485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00490 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS00490 PF00072 Response regulator receiver domain AMRN_RS00495 PF04264 YceI-like domain AMRN_RS00505 PF05114 Protein of unknown function (DUF692) AMRN_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00515 PF00989 PAS fold AMRN_RS00515 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00520 PF00072 Response regulator receiver domain AMRN_RS00520 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS00535 PF01554 MatE AMRN_RS00540 PF13411 MerR HTH family regulatory protein AMRN_RS00545 PF00857 Isochorismatase family AMRN_RS00550 PF01842 ACT domain AMRN_RS00550 PF03447 Homoserine dehydrogenase, NAD binding domain AMRN_RS00550 PF00742 Homoserine dehydrogenase AMRN_RS00555 PF00155 Aminotransferase class I and II AMRN_RS00565 PF00588 SpoU rRNA Methylase family AMRN_RS00565 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMRN_RS00570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS00575 PF01197 Ribosomal protein L31 AMRN_RS00595 PF17156 Gammaproteobacterial periplasmic sensor domain AMRN_RS00595 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS00635 PF00571 CBS domain AMRN_RS00635 PF01769 Divalent cation transporter AMRN_RS00635 PF03448 MgtE intracellular N domain AMRN_RS00640 PF01590 GAF domain AMRN_RS00640 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS00640 PF00360 Phytochrome region AMRN_RS00640 PF00563 EAL domain AMRN_RS00645 PF08447 PAS fold AMRN_RS00645 PF08448 PAS fold AMRN_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS00660 PF00578 AhpC/TSA family AMRN_RS00660 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMRN_RS00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00670 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00670 PF00989 PAS fold AMRN_RS00670 PF08447 PAS fold AMRN_RS00680 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS00685 PF02222 ATP-grasp domain AMRN_RS00690 PF01678 Diaminopimelate epimerase AMRN_RS00695 PF01121 Dephospho-CoA kinase AMRN_RS00700 PF17284 Spermidine synthase tetramerisation domain AMRN_RS00705 PF00586 AIR synthase related protein, N-terminal domain AMRN_RS00705 PF02769 AIR synthase related protein, C-terminal domain AMRN_RS00715 PF04264 YceI-like domain AMRN_RS00720 PF01047 MarR family AMRN_RS00725 PF01810 LysE type translocator AMRN_RS00735 PF00266 Aminotransferase class-V AMRN_RS00740 PF13393 Histidyl-tRNA synthetase AMRN_RS00745 PF00709 Adenylosuccinate synthetase AMRN_RS00755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMRN_RS00755 PF00117 Glutamine amidotransferase class-I AMRN_RS00770 PF02542 YgbB family AMRN_RS00770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMRN_RS00780 PF01964 Radical SAM ThiC family AMRN_RS00785 PF01883 Iron-sulfur cluster assembly protein AMRN_RS00785 PF10609 NUBPL iron-transfer P-loop NTPase AMRN_RS00795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMRN_RS00795 PF01502 Phosphoribosyl-AMP cyclohydrolase AMRN_RS00805 PF01063 Amino-transferase class IV AMRN_RS00815 PF00809 Pterin binding enzyme AMRN_RS00815 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMRN_RS00815 PF02607 B12 binding domain AMRN_RS00815 PF02310 B12 binding domain AMRN_RS00815 PF02574 Homocysteine S-methyltransferase AMRN_RS00850 PF00563 EAL domain AMRN_RS00850 PF01590 GAF domain AMRN_RS00850 PF00360 Phytochrome region AMRN_RS00850 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS00860 PF02913 FAD linked oxidases, C-terminal domain AMRN_RS00860 PF01565 FAD binding domain AMRN_RS00870 PF00578 AhpC/TSA family AMRN_RS00875 PF13649 Methyltransferase domain AMRN_RS00880 PF01687 Riboflavin kinase AMRN_RS00880 PF06574 FAD synthetase AMRN_RS00885 PF01728 FtsJ-like methyltransferase AMRN_RS00885 PF01479 S4 domain AMRN_RS00890 PF09186 Domain of unknown function (DUF1949) AMRN_RS00890 PF01205 Uncharacterized protein family UPF0029 AMRN_RS00895 PF00263 Bacterial type II and III secretion system protein AMRN_RS00895 PF03958 Bacterial type II/III secretion system short domain AMRN_RS00910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMRN_RS00920 PF01645 Conserved region in glutamate synthase AMRN_RS00935 PF00793 DAHP synthetase I family AMRN_RS00940 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMRN_RS00945 PF01029 NusB family AMRN_RS00950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMRN_RS01000 PF08447 PAS fold AMRN_RS01000 PF08448 PAS fold AMRN_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS01040 PF02664 S-Ribosylhomocysteinase (LuxS) AMRN_RS01045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMRN_RS01045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMRN_RS01045 PF10371 Domain of unknown function AMRN_RS01045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMRN_RS01045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMRN_RS01050 PF13419 Haloacid dehalogenase-like hydrolase AMRN_RS01055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMRN_RS01070 PF12800 4Fe-4S binding domain AMRN_RS01070 PF13247 4Fe-4S dicluster domain AMRN_RS01075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS01075 PF00384 Molybdopterin oxidoreductase AMRN_RS01075 PF01568 Molydopterin dinucleotide binding domain AMRN_RS01085 PF12833 Helix-turn-helix domain AMRN_RS01090 PF00380 Ribosomal protein S9/S16 AMRN_RS01095 PF00572 Ribosomal protein L13 AMRN_RS01100 PF13493 Domain of unknown function (DUF4118) AMRN_RS01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS01100 PF02702 Osmosensitive K+ channel His kinase sensor domain AMRN_RS01100 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS01105 PF00072 Response regulator receiver domain AMRN_RS01105 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS01115 PF01895 PhoU domain AMRN_RS01120 PF00005 ABC transporter AMRN_RS01125 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS01135 PF00989 PAS fold AMRN_RS01135 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS01135 PF01590 GAF domain AMRN_RS01135 PF00563 EAL domain AMRN_RS01145 PF00472 RF-1 domain AMRN_RS01145 PF03462 PCRF domain AMRN_RS01150 PF01649 Ribosomal protein S20 AMRN_RS01155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMRN_RS01155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMRN_RS01155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMRN_RS01155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMRN_RS01160 PF01252 Signal peptidase (SPase) II AMRN_RS01165 PF00330 Aconitase family (aconitate hydratase) AMRN_RS01170 PF12804 MobA-like NTP transferase domain AMRN_RS01185 PF01568 Molydopterin dinucleotide binding domain AMRN_RS01185 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMRN_RS01185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS01185 PF00384 Molybdopterin oxidoreductase AMRN_RS01190 PF13247 4Fe-4S dicluster domain AMRN_RS01200 PF00581 Rhodanese-like domain AMRN_RS01210 PF00453 Ribosomal protein L20 AMRN_RS01215 PF01632 Ribosomal protein L35 AMRN_RS01220 PF05198 Translation initiation factor IF-3, N-terminal domain AMRN_RS01220 PF00707 Translation initiation factor IF-3, C-terminal domain AMRN_RS01225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMRN_RS01225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMRN_RS01225 PF03129 Anticodon binding domain AMRN_RS01250 PF05818 Enterobacterial TraT complement resistance protein AMRN_RS01260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMRN_RS01260 PF13288 DXP reductoisomerase C-terminal domain AMRN_RS01260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMRN_RS01280 PF00814 Glycoprotease family AMRN_RS01285 PF01253 Translation initiation factor SUI1 AMRN_RS01290 PF01235 Sodium:alanine symporter family AMRN_RS01295 PF03853 YjeF-related protein N-terminus AMRN_RS01295 PF01256 Carbohydrate kinase AMRN_RS01305 PF05690 Thiazole biosynthesis protein ThiG AMRN_RS01375 PF00072 Response regulator receiver domain AMRN_RS01375 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS01380 PF00360 Phytochrome region AMRN_RS01380 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS01380 PF01590 GAF domain AMRN_RS01380 PF00563 EAL domain AMRN_RS01385 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMRN_RS01390 PF01142 tRNA pseudouridine synthase D (TruD) AMRN_RS01400 PF02470 MlaD protein AMRN_RS01405 PF00005 ABC transporter AMRN_RS01405 PF09383 NIL domain AMRN_RS01410 PF02405 Permease MlaE AMRN_RS01415 PF15437 Plasminogen-binding protein pgbA C-terminal AMRN_RS01425 PF03572 Peptidase family S41 AMRN_RS01425 PF13180 PDZ domain AMRN_RS01430 PF01259 SAICAR synthetase AMRN_RS01435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMRN_RS01450 PF01553 Acyltransferase AMRN_RS01455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMRN_RS01465 PF02416 mttA/Hcf106 family AMRN_RS01470 PF00750 tRNA synthetases class I (R) AMRN_RS01470 PF05746 DALR anticodon binding domain AMRN_RS01470 PF03485 Arginyl tRNA synthetase N terminal domain AMRN_RS01480 PF01467 Cytidylyltransferase-like AMRN_RS01485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMRN_RS01485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMRN_RS01490 PF00162 Phosphoglycerate kinase AMRN_RS01495 PF00121 Triosephosphate isomerase AMRN_RS01505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMRN_RS01505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMRN_RS01510 PF13344 Haloacid dehalogenase-like hydrolase AMRN_RS01515 PF00800 Prephenate dehydratase AMRN_RS01515 PF01817 Chorismate mutase type II AMRN_RS01515 PF01842 ACT domain AMRN_RS01520 PF00155 Aminotransferase class I and II AMRN_RS01525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMRN_RS01525 PF02779 Transketolase, pyrimidine binding domain AMRN_RS01525 PF02780 Transketolase, C-terminal domain AMRN_RS01530 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS01540 PF02545 Maf-like protein AMRN_RS01565 PF00877 NlpC/P60 family AMRN_RS01575 PF02272 DHHA1 domain AMRN_RS01575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMRN_RS01575 PF01411 tRNA synthetases class II (A) AMRN_RS01580 PF00085 Thioredoxin AMRN_RS01585 PF13426 PAS domain AMRN_RS01585 PF13188 PAS domain AMRN_RS01585 PF00989 PAS fold AMRN_RS01585 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS01585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS01590 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS01590 PF00072 Response regulator receiver domain AMRN_RS01595 PF01235 Sodium:alanine symporter family AMRN_RS01600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS01605 PF05173 Dihydrodipicolinate reductase, C-terminus AMRN_RS01605 PF01113 Dihydrodipicolinate reductase, N-terminus AMRN_RS01610 PF00156 Phosphoribosyl transferase domain AMRN_RS01615 PF04055 Radical SAM superfamily AMRN_RS01615 PF16199 Radical_SAM C-terminal domain AMRN_RS01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS01620 PF03466 LysR substrate binding domain AMRN_RS01625 PF00580 UvrD/REP helicase N-terminal domain AMRN_RS01625 PF13361 UvrD-like helicase C-terminal domain AMRN_RS01630 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMRN_RS01635 PF00288 GHMP kinases N terminal domain AMRN_RS01640 PF01668 SmpB protein AMRN_RS01645 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMRN_RS01680 PF12705 PD-(D/E)XK nuclease superfamily AMRN_RS01685 PF03222 Tryptophan/tyrosine permease family AMRN_RS01690 PF05538 Campylobacter major outer membrane protein AMRN_RS01695 PF00472 RF-1 domain AMRN_RS01695 PF03462 PCRF domain AMRN_RS01705 PF05538 Campylobacter major outer membrane protein AMRN_RS01715 PF02660 Glycerol-3-phosphate acyltransferase AMRN_RS01720 PF02445 Quinolinate synthetase A protein AMRN_RS01725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMRN_RS01725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMRN_RS01740 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMRN_RS01750 PF08544 GHMP kinases C terminal AMRN_RS01750 PF00288 GHMP kinases N terminal domain AMRN_RS01760 PF00009 Elongation factor Tu GTP binding domain AMRN_RS01760 PF11987 Translation-initiation factor 2 AMRN_RS01760 PF04760 Translation initiation factor IF-2, N-terminal region AMRN_RS01765 PF02033 Ribosome-binding factor A AMRN_RS01770 PF02576 RimP N-terminal domain AMRN_RS01775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMRN_RS01775 PF01872 RibD C-terminal domain AMRN_RS01780 PF04717 Type VI secretion system, phage-baseplate injector AMRN_RS01830 PF01132 Elongation factor P (EF-P) OB domain AMRN_RS01830 PF08207 Elongation factor P (EF-P) KOW-like domain AMRN_RS01830 PF09285 Elongation factor P, C-terminal AMRN_RS01835 PF01842 ACT domain AMRN_RS01835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMRN_RS01835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMRN_RS01840 PF00575 S1 RNA binding domain AMRN_RS01845 PF02401 LytB protein AMRN_RS01850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMRN_RS01855 PF01588 Putative tRNA binding domain AMRN_RS01855 PF03484 tRNA synthetase B5 domain AMRN_RS01855 PF03147 Ferredoxin-fold anticodon binding domain AMRN_RS01855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMRN_RS01860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMRN_RS01860 PF01409 tRNA synthetases class II core domain (F) AMRN_RS01865 PF01230 HIT domain AMRN_RS01870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMRN_RS01875 PF02801 Beta-ketoacyl synthase, C-terminal domain AMRN_RS01875 PF00109 Beta-ketoacyl synthase, N-terminal domain AMRN_RS01880 PF00550 Phosphopantetheine attachment site AMRN_RS01900 PF06508 Queuosine biosynthesis protein QueC AMRN_RS01905 PF00994 Probable molybdopterin binding domain AMRN_RS01905 PF03454 MoeA C-terminal region (domain IV) AMRN_RS01905 PF03453 MoeA N-terminal region (domain I and II) AMRN_RS01915 PF04452 RNA methyltransferase AMRN_RS01930 PF00033 Cytochrome b/b6/petB AMRN_RS01930 PF00032 Cytochrome b(C-terminal)/b6/petD AMRN_RS01940 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS01945 PF00696 Amino acid kinase family AMRN_RS01950 PF17158 Membrane-associated sensor, integral membrane domain AMRN_RS01950 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS01955 PF00580 UvrD/REP helicase N-terminal domain AMRN_RS01955 PF13361 UvrD-like helicase C-terminal domain AMRN_RS01960 PF00672 HAMP domain AMRN_RS01960 PF02203 Tar ligand binding domain homologue AMRN_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS01965 PF02581 Thiamine monophosphate synthase AMRN_RS01970 PF00672 HAMP domain AMRN_RS01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS01970 PF02203 Tar ligand binding domain homologue AMRN_RS01975 PF00119 ATP synthase A chain AMRN_RS01980 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS01980 PF13291 ACT domain AMRN_RS01985 PF01746 tRNA (Guanine-1)-methyltransferase AMRN_RS01990 PF01245 Ribosomal protein L19 AMRN_RS02005 PF01810 LysE type translocator AMRN_RS02015 PF00106 short chain dehydrogenase AMRN_RS02020 PF12821 Threonine/Serine exporter, ThrE AMRN_RS02025 PF06738 Putative threonine/serine exporter AMRN_RS02040 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS02040 PF10442 FIST C domain AMRN_RS02040 PF08495 FIST N domain AMRN_RS02040 PF00563 EAL domain AMRN_RS02050 PF03309 Type III pantothenate kinase AMRN_RS02055 PF01634 ATP phosphoribosyltransferase AMRN_RS02060 PF08241 Methyltransferase domain AMRN_RS02085 PF00579 tRNA synthetases class I (W and Y) AMRN_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS02105 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMRN_RS02110 PF02659 Putative manganese efflux pump AMRN_RS02115 PF07690 Major Facilitator Superfamily AMRN_RS02120 PF07690 Major Facilitator Superfamily AMRN_RS02125 PF00005 ABC transporter AMRN_RS02125 PF00664 ABC transporter transmembrane region AMRN_RS02130 PF00005 ABC transporter AMRN_RS02130 PF00664 ABC transporter transmembrane region AMRN_RS02135 PF00593 TonB dependent receptor AMRN_RS02135 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02145 PF00593 TonB dependent receptor AMRN_RS02145 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02155 PF00593 TonB dependent receptor AMRN_RS02155 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02165 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02165 PF00593 TonB dependent receptor AMRN_RS02170 PF00072 Response regulator receiver domain AMRN_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02175 PF07568 Histidine kinase AMRN_RS02175 PF12282 Signal transduction histidine kinase AMRN_RS02185 PF00593 TonB dependent receptor AMRN_RS02185 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02205 PF02472 Biopolymer transport protein ExbD/TolR AMRN_RS02210 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS02215 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS02240 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02240 PF00593 TonB dependent receptor AMRN_RS02250 PF00593 TonB dependent receptor AMRN_RS02250 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02255 PF07883 Cupin domain AMRN_RS02255 PF12833 Helix-turn-helix domain AMRN_RS02265 PF00593 TonB dependent receptor AMRN_RS02265 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02270 PF00072 Response regulator receiver domain AMRN_RS02270 PF12833 Helix-turn-helix domain AMRN_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02275 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS02275 PF00989 PAS fold AMRN_RS02295 PF02403 Seryl-tRNA synthetase N-terminal domain AMRN_RS02295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMRN_RS02300 PF05140 ResB-like family AMRN_RS02300 PF01578 Cytochrome C assembly protein AMRN_RS02305 PF02335 Cytochrome c552 AMRN_RS02310 PF03264 NapC/NirT cytochrome c family, N-terminal region AMRN_RS02320 PF08447 PAS fold AMRN_RS02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS02340 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AMRN_RS02345 PF12801 4Fe-4S binding domain AMRN_RS02345 PF00037 4Fe-4S binding domain AMRN_RS02350 PF12800 4Fe-4S binding domain AMRN_RS02350 PF12838 4Fe-4S dicluster domain AMRN_RS02355 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMRN_RS02355 PF01568 Molydopterin dinucleotide binding domain AMRN_RS02355 PF00384 Molybdopterin oxidoreductase AMRN_RS02355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS02360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS02360 PF10414 Sirohaem synthase dimerisation region AMRN_RS02375 PF00591 Glycosyl transferase family, a/b domain AMRN_RS02375 PF02885 Glycosyl transferase family, helical bundle domain AMRN_RS02385 PF06463 Molybdenum Cofactor Synthesis C AMRN_RS02385 PF04055 Radical SAM superfamily AMRN_RS02395 PF00312 Ribosomal protein S15 AMRN_RS02415 PF01266 FAD dependent oxidoreductase AMRN_RS02430 PF00072 Response regulator receiver domain AMRN_RS02430 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02435 PF08447 PAS fold AMRN_RS02435 PF08448 PAS fold AMRN_RS02445 PF06628 Catalase-related immune-responsive AMRN_RS02445 PF00199 Catalase AMRN_RS02470 PF08521 Two-component sensor kinase N-terminal AMRN_RS02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02470 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS02475 PF00072 Response regulator receiver domain AMRN_RS02475 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS02480 PF00639 PPIC-type PPIASE domain AMRN_RS02485 PF01116 Fructose-bisphosphate aldolase class-II AMRN_RS02490 PF02472 Biopolymer transport protein ExbD/TolR AMRN_RS02495 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS02505 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS02505 PF08448 PAS fold AMRN_RS02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02505 PF13188 PAS domain AMRN_RS02505 PF00072 Response regulator receiver domain AMRN_RS02510 PF01202 Shikimate kinase AMRN_RS02515 PF00815 Histidinol dehydrogenase AMRN_RS02525 PF00348 Polyprenyl synthetase AMRN_RS02530 PF01488 Shikimate / quinate 5-dehydrogenase AMRN_RS02530 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMRN_RS02530 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMRN_RS02535 PF03129 Anticodon binding domain AMRN_RS02535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMRN_RS02535 PF04073 Aminoacyl-tRNA editing domain AMRN_RS02540 PF00924 Mechanosensitive ion channel AMRN_RS02540 PF05552 Conserved TM helix AMRN_RS02545 PF01743 Poly A polymerase head domain AMRN_RS02545 PF12627 Probable RNA and SrmB- binding site of polymerase A AMRN_RS02545 PF01966 HD domain AMRN_RS02565 PF02699 Preprotein translocase subunit AMRN_RS02570 PF02355 Protein export membrane protein AMRN_RS02575 PF07549 SecD/SecF GG Motif AMRN_RS02575 PF02355 Protein export membrane protein AMRN_RS02580 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS02595 PF09334 tRNA synthetases class I (M) AMRN_RS02595 PF13603 Leucyl-tRNA synthetase, Domain 2 AMRN_RS02595 PF00133 tRNA synthetases class I (I, L, M and V) AMRN_RS02605 PF08245 Mur ligase middle domain AMRN_RS02610 PF04225 Opacity-associated protein A LysM-like domain AMRN_RS02610 PF01551 Peptidase family M23 AMRN_RS02625 PF02254 TrkA-N domain AMRN_RS02625 PF00999 Sodium/hydrogen exchanger family AMRN_RS02640 PF00005 ABC transporter AMRN_RS02640 PF02687 FtsX-like permease family AMRN_RS02640 PF12704 MacB-like periplasmic core domain AMRN_RS02645 PF00005 ABC transporter AMRN_RS02645 PF02687 FtsX-like permease family AMRN_RS02645 PF12704 MacB-like periplasmic core domain AMRN_RS02650 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS02650 PF00593 TonB dependent receptor AMRN_RS02670 PF00072 Response regulator receiver domain AMRN_RS02675 PF12282 Signal transduction histidine kinase AMRN_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02675 PF07568 Histidine kinase AMRN_RS02695 PF03461 TRCF domain AMRN_RS02695 PF00271 Helicase conserved C-terminal domain AMRN_RS02695 PF17757 UvrB interaction domain AMRN_RS02695 PF00270 DEAD/DEAH box helicase AMRN_RS02695 PF02559 CarD-like/TRCF domain AMRN_RS02700 PF00221 Aromatic amino acid lyase AMRN_RS02715 PF00890 FAD binding domain AMRN_RS02715 PF04205 FMN-binding domain AMRN_RS02720 PF00989 PAS fold AMRN_RS02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02720 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS02725 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS02725 PF00072 Response regulator receiver domain AMRN_RS02735 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AMRN_RS02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS02735 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMRN_RS02745 PF00072 Response regulator receiver domain AMRN_RS02745 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS02760 PF13277 YmdB-like protein AMRN_RS02780 PF01209 ubiE/COQ5 methyltransferase family AMRN_RS02785 PF02601 Exonuclease VII, large subunit AMRN_RS02785 PF13742 OB-fold nucleic acid binding domain AMRN_RS02795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS02795 PF08447 PAS fold AMRN_RS02800 PF01584 CheW-like domain AMRN_RS02805 PF00072 Response regulator receiver domain AMRN_RS02810 PF00158 Sigma-54 interaction domain AMRN_RS02810 PF00072 Response regulator receiver domain AMRN_RS02810 PF02954 Bacterial regulatory protein, Fis family AMRN_RS02815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMRN_RS02825 PF02261 Aspartate decarboxylase AMRN_RS02830 PF02575 YbaB/EbfC DNA-binding family AMRN_RS02835 PF00348 Polyprenyl synthetase AMRN_RS02840 PF00166 Chaperonin 10 Kd subunit AMRN_RS02845 PF00118 TCP-1/cpn60 chaperonin family AMRN_RS02865 PF00893 Small Multidrug Resistance protein AMRN_RS02875 PF00459 Inositol monophosphatase family AMRN_RS02880 PF01380 SIS domain AMRN_RS02885 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMRN_RS02885 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMRN_RS02885 PF02772 S-adenosylmethionine synthetase, central domain AMRN_RS02890 PF17848 Acetyl-coA carboxylase zinc finger domain AMRN_RS02890 PF01039 Carboxyl transferase domain AMRN_RS02895 PF02581 Thiamine monophosphate synthase AMRN_RS02900 PF02590 Predicted SPOUT methyltransferase AMRN_RS02915 PF01207 Dihydrouridine synthase (Dus) AMRN_RS02925 PF17862 AAA+ lid domain AMRN_RS02925 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS02925 PF01434 Peptidase family M41 AMRN_RS02935 PF11849 Domain of unknown function (DUF3369) AMRN_RS02940 PF00158 Sigma-54 interaction domain AMRN_RS02940 PF00072 Response regulator receiver domain AMRN_RS02940 PF02954 Bacterial regulatory protein, Fis family AMRN_RS02945 PF08447 PAS fold AMRN_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS02945 PF08448 PAS fold AMRN_RS02950 PF08502 LeuA allosteric (dimerisation) domain AMRN_RS02950 PF00682 HMGL-like AMRN_RS02955 PF02254 TrkA-N domain AMRN_RS02955 PF00999 Sodium/hydrogen exchanger family AMRN_RS02960 PF07556 Protein of unknown function (DUF1538) AMRN_RS02975 PF05190 MutS family domain IV AMRN_RS02975 PF05188 MutS domain II AMRN_RS02975 PF01624 MutS domain I AMRN_RS02975 PF00488 MutS domain V AMRN_RS02975 PF05192 MutS domain III AMRN_RS03010 PF17932 Tetracyclin repressor-like, C-terminal domain AMRN_RS03010 PF00440 Bacterial regulatory proteins, tetR family AMRN_RS03015 PF00226 DnaJ domain AMRN_RS03015 PF05099 Tellurite resistance protein TerB AMRN_RS03025 PF00977 Histidine biosynthesis protein AMRN_RS03030 PF08338 Domain of unknown function (DUF1731) AMRN_RS03030 PF01370 NAD dependent epimerase/dehydratase family AMRN_RS03035 PF00117 Glutamine amidotransferase class-I AMRN_RS03055 PF06421 GTP-binding protein LepA C-terminus AMRN_RS03055 PF03144 Elongation factor Tu domain 2 AMRN_RS03055 PF00009 Elongation factor Tu GTP binding domain AMRN_RS03055 PF00679 Elongation factor G C-terminus AMRN_RS03060 PF00691 OmpA family AMRN_RS03060 PF05736 OprF membrane domain AMRN_RS03065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMRN_RS03065 PF14572 Phosphoribosyl synthetase-associated domain AMRN_RS03080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMRN_RS03085 PF01321 Creatinase/Prolidase N-terminal domain AMRN_RS03085 PF00557 Metallopeptidase family M24 AMRN_RS03090 PF01220 Dehydroquinase class II AMRN_RS03095 PF01979 Amidohydrolase family AMRN_RS03100 PF01343 Peptidase family S49 AMRN_RS03105 PF00271 Helicase conserved C-terminal domain AMRN_RS03105 PF00270 DEAD/DEAH box helicase AMRN_RS03110 PF00871 Acetokinase family AMRN_RS03115 PF01515 Phosphate acetyl/butaryl transferase AMRN_RS03120 PF00871 Acetokinase family AMRN_RS03125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMRN_RS03125 PF11490 DNA polymerase III polC-type N-terminus II AMRN_RS03125 PF00929 Exonuclease AMRN_RS03125 PF14579 Helix-hairpin-helix motif AMRN_RS03125 PF14480 DNA polymerase III polC-type N-terminus I AMRN_RS03125 PF02811 PHP domain AMRN_RS03125 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMRN_RS03135 PF00474 Sodium:solute symporter family AMRN_RS03145 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMRN_RS03145 PF00929 Exonuclease AMRN_RS03145 PF02811 PHP domain AMRN_RS03145 PF14579 Helix-hairpin-helix motif AMRN_RS03145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMRN_RS03145 PF11490 DNA polymerase III polC-type N-terminus II AMRN_RS03155 PF00474 Sodium:solute symporter family AMRN_RS03165 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS03165 PF00072 Response regulator receiver domain AMRN_RS03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS03235 PF18146 Damage-inducible protein CinA KH domain AMRN_RS03235 PF02464 Competence-damaged protein AMRN_RS03235 PF00994 Probable molybdopterin binding domain AMRN_RS03240 PF06039 Malate:quinone oxidoreductase (Mqo) AMRN_RS03245 PF00133 tRNA synthetases class I (I, L, M and V) AMRN_RS03245 PF08264 Anticodon-binding domain of tRNA AMRN_RS03260 PF02875 Mur ligase family, glutamate ligase domain AMRN_RS03260 PF08245 Mur ligase middle domain AMRN_RS03280 PF01882 Protein of unknown function DUF58 AMRN_RS03285 PF07726 ATPase family associated with various cellular activities (AAA) AMRN_RS03285 PF17863 AAA lid domain AMRN_RS03290 PF01464 Transglycosylase SLT domain AMRN_RS03290 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMRN_RS03295 PF00318 Ribosomal protein S2 AMRN_RS03300 PF00889 Elongation factor TS AMRN_RS03305 PF00005 ABC transporter AMRN_RS03315 PF00625 Guanylate kinase AMRN_RS03320 PF08448 PAS fold AMRN_RS03320 PF00563 EAL domain AMRN_RS03320 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS03325 PF00710 Asparaginase, N-terminal AMRN_RS03325 PF17763 Glutaminase/Asparaginase C-terminal domain AMRN_RS03330 PF00403 Heavy-metal-associated domain AMRN_RS03340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMRN_RS03345 PF00005 ABC transporter AMRN_RS03345 PF00664 ABC transporter transmembrane region AMRN_RS03350 PF00762 Ferrochelatase AMRN_RS03360 PF11849 Domain of unknown function (DUF3369) AMRN_RS03365 PF01875 Memo-like protein AMRN_RS03370 PF02698 DUF218 domain AMRN_RS03375 PF00005 ABC transporter AMRN_RS03380 PF00950 ABC 3 transport family AMRN_RS03385 PF17783 CvfB-like winged helix domain AMRN_RS03385 PF13509 S1 domain AMRN_RS03390 PF08534 Redoxin AMRN_RS03400 PF00174 Oxidoreductase molybdopterin binding domain AMRN_RS03405 PF01794 Ferric reductase like transmembrane component AMRN_RS03410 PF00106 short chain dehydrogenase AMRN_RS03430 PF01593 Flavin containing amine oxidoreductase AMRN_RS03450 PF13361 UvrD-like helicase C-terminal domain AMRN_RS03450 PF00580 UvrD/REP helicase N-terminal domain AMRN_RS03455 PF08448 PAS fold AMRN_RS03455 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS03460 PF00174 Oxidoreductase molybdopterin binding domain AMRN_RS03530 PF10458 Valyl tRNA synthetase tRNA binding arm AMRN_RS03530 PF08264 Anticodon-binding domain of tRNA AMRN_RS03530 PF00133 tRNA synthetases class I (I, L, M and V) AMRN_RS03535 PF01638 HxlR-like helix-turn-helix AMRN_RS03540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS03540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMRN_RS03555 PF00072 Response regulator receiver domain AMRN_RS03555 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS03560 PF00873 AcrB/AcrD/AcrF family AMRN_RS03580 PF07690 Major Facilitator Superfamily AMRN_RS03585 PF01725 Ham1 family AMRN_RS03605 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMRN_RS03605 PF03807 NADP oxidoreductase coenzyme F420-dependent AMRN_RS03610 PF13525 Outer membrane lipoprotein AMRN_RS03615 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS03615 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMRN_RS03615 PF05362 Lon protease (S16) C-terminal proteolytic domain AMRN_RS03630 PF11799 impB/mucB/samB family C-terminal domain AMRN_RS03630 PF11798 IMS family HHH motif AMRN_RS03630 PF00817 impB/mucB/samB family AMRN_RS03645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS03645 PF08447 PAS fold AMRN_RS03655 PF00403 Heavy-metal-associated domain AMRN_RS03660 PF01022 Bacterial regulatory protein, arsR family AMRN_RS03690 PF00589 Phage integrase family AMRN_RS03690 PF14659 Phage integrase, N-terminal SAM-like domain AMRN_RS03700 PF01555 DNA methylase AMRN_RS03765 PF00145 C-5 cytosine-specific DNA methylase AMRN_RS03770 PF00145 C-5 cytosine-specific DNA methylase AMRN_RS03795 PF00578 AhpC/TSA family AMRN_RS03800 PF05661 Protein of unknown function (DUF808) AMRN_RS03810 PF00005 ABC transporter AMRN_RS03815 PF00005 ABC transporter AMRN_RS03820 PF12911 N-terminal TM domain of oligopeptide transport permease C AMRN_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS03830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMRN_RS03840 PF00563 EAL domain AMRN_RS03840 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS03840 PF03707 Bacterial signalling protein N terminal repeat AMRN_RS03845 PF02203 Tar ligand binding domain homologue AMRN_RS03845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS03845 PF00672 HAMP domain AMRN_RS03850 PF00672 HAMP domain AMRN_RS03850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS03850 PF02743 Cache domain AMRN_RS03855 PF00137 ATP synthase subunit C AMRN_RS03880 PF04116 Fatty acid hydroxylase superfamily AMRN_RS03885 PF03150 Di-haem cytochrome c peroxidase AMRN_RS03910 PF02311 AraC-like ligand binding domain AMRN_RS03910 PF12833 Helix-turn-helix domain AMRN_RS03920 PF01297 Zinc-uptake complex component A periplasmic AMRN_RS03925 PF03824 High-affinity nickel-transport protein AMRN_RS03945 PF01053 Cys/Met metabolism PLP-dependent enzyme AMRN_RS03950 PF01053 Cys/Met metabolism PLP-dependent enzyme AMRN_RS03955 PF16199 Radical_SAM C-terminal domain AMRN_RS03955 PF04055 Radical SAM superfamily AMRN_RS03960 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMRN_RS03980 PF00440 Bacterial regulatory proteins, tetR family AMRN_RS03980 PF16295 Tetracyclin repressor-like, C-terminal domain AMRN_RS03990 PF00873 AcrB/AcrD/AcrF family AMRN_RS04005 PF01883 Iron-sulfur cluster assembly protein AMRN_RS04010 PF02657 Fe-S metabolism associated domain AMRN_RS04015 PF00266 Aminotransferase class-V AMRN_RS04020 PF01458 Uncharacterized protein family (UPF0051) AMRN_RS04025 PF00005 ABC transporter AMRN_RS04030 PF01458 Uncharacterized protein family (UPF0051) AMRN_RS04035 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS04040 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMRN_RS04045 PF00266 Aminotransferase class-V AMRN_RS04050 PF04324 BFD-like [2Fe-2S] binding domain AMRN_RS04050 PF01592 NifU-like N terminal domain AMRN_RS04050 PF01106 NifU-like domain AMRN_RS04070 PF00206 Lyase AMRN_RS04070 PF14698 Argininosuccinate lyase C-terminal AMRN_RS04075 PF01584 CheW-like domain AMRN_RS04075 PF00072 Response regulator receiver domain AMRN_RS04080 PF00899 ThiF family AMRN_RS04085 PF03449 Transcription elongation factor, N-terminal AMRN_RS04085 PF01272 Transcription elongation factor, GreA/GreB, C-term AMRN_RS04090 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMRN_RS04090 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMRN_RS04105 PF00271 Helicase conserved C-terminal domain AMRN_RS04105 PF04851 Type III restriction enzyme, res subunit AMRN_RS04105 PF17757 UvrB interaction domain AMRN_RS04105 PF12344 Ultra-violet resistance protein B AMRN_RS04105 PF02151 UvrB/uvrC motif AMRN_RS04110 PF00072 Response regulator receiver domain AMRN_RS04110 PF00211 Adenylate and Guanylate cyclase catalytic domain AMRN_RS04120 PF02576 RimP N-terminal domain AMRN_RS04120 PF17384 RimP C-terminal SH3 domain AMRN_RS04125 PF10576 Iron-sulfur binding domain of endonuclease III AMRN_RS04125 PF00633 Helix-hairpin-helix motif AMRN_RS04125 PF00730 HhH-GPD superfamily base excision DNA repair protein AMRN_RS04150 PF02502 Ribose/Galactose Isomerase AMRN_RS04155 PF10502 Signal peptidase, peptidase S26 AMRN_RS04160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMRN_RS04160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMRN_RS04170 PF01386 Ribosomal L25p family AMRN_RS04170 PF14693 Ribosomal protein TL5, C-terminal domain AMRN_RS04175 PF01195 Peptidyl-tRNA hydrolase AMRN_RS04190 PF01520 N-acetylmuramoyl-L-alanine amidase AMRN_RS04200 PF00579 tRNA synthetases class I (W and Y) AMRN_RS04200 PF01479 S4 domain AMRN_RS04205 PF02824 TGS domain AMRN_RS04205 PF04607 Region found in RelA / SpoT proteins AMRN_RS04205 PF13291 ACT domain AMRN_RS04210 PF01192 RNA polymerase Rpb6 AMRN_RS04215 PF00696 Amino acid kinase family AMRN_RS04225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMRN_RS04230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMRN_RS04235 PF04715 Anthranilate synthase component I, N terminal region AMRN_RS04235 PF00425 chorismate binding enzyme AMRN_RS04245 PF00464 Serine hydroxymethyltransferase AMRN_RS04250 PF00152 tRNA synthetases class II (D, K and N) AMRN_RS04250 PF01336 OB-fold nucleic acid binding domain AMRN_RS04260 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS04265 PF04551 GcpE protein AMRN_RS04270 PF00772 DnaB-like helicase N terminal domain AMRN_RS04270 PF03796 DnaB-like helicase C terminal domain AMRN_RS04275 PF00483 Nucleotidyl transferase AMRN_RS04280 PF00342 Phosphoglucose isomerase AMRN_RS04295 PF08645 Polynucleotide kinase 3 phosphatase AMRN_RS04305 PF14743 DNA ligase OB-like domain AMRN_RS04305 PF01068 ATP dependent DNA ligase domain AMRN_RS04310 PF01370 NAD dependent epimerase/dehydratase family AMRN_RS04315 PF00294 pfkB family carbohydrate kinase AMRN_RS04315 PF01467 Cytidylyltransferase-like AMRN_RS04320 PF00156 Phosphoribosyl transferase domain AMRN_RS04330 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS04340 PF02789 Cytosol aminopeptidase family, N-terminal domain AMRN_RS04340 PF00883 Cytosol aminopeptidase family, catalytic domain AMRN_RS04345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMRN_RS04345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMRN_RS04345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMRN_RS04350 PF01370 NAD dependent epimerase/dehydratase family AMRN_RS04355 PF02350 UDP-N-acetylglucosamine 2-epimerase AMRN_RS04360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMRN_RS04360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMRN_RS04360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMRN_RS04365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS04370 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS04375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMRN_RS04375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMRN_RS04380 PF16363 GDP-mannose 4,6 dehydratase AMRN_RS04385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS04390 PF00551 Formyl transferase AMRN_RS04390 PF02911 Formyl transferase, C-terminal domain AMRN_RS04400 PF00117 Glutamine amidotransferase class-I AMRN_RS04405 PF00977 Histidine biosynthesis protein AMRN_RS04410 PF01757 Acyltransferase family AMRN_RS04430 PF00107 Zinc-binding dehydrogenase AMRN_RS04445 PF02397 Bacterial sugar transferase AMRN_RS04450 PF17836 PglD N-terminal domain AMRN_RS04450 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS04455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS04460 PF02719 Polysaccharide biosynthesis protein AMRN_RS04465 PF06071 Protein of unknown function (DUF933) AMRN_RS04465 PF01926 50S ribosome-binding GTPase AMRN_RS04485 PF06865 Pyrimidine/purine nucleoside phosphorylase AMRN_RS04500 PF00005 ABC transporter AMRN_RS04505 PF01032 FecCD transport family AMRN_RS04510 PF01497 Periplasmic binding protein AMRN_RS04520 PF02769 AIR synthase related protein, C-terminal domain AMRN_RS04520 PF00586 AIR synthase related protein, N-terminal domain AMRN_RS04525 PF01142 tRNA pseudouridine synthase D (TruD) AMRN_RS04535 PF02203 Tar ligand binding domain homologue AMRN_RS04535 PF00672 HAMP domain AMRN_RS04535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS04540 PF07499 RuvA, C-terminal domain AMRN_RS04540 PF01330 RuvA N terminal domain AMRN_RS04545 PF01820 D-ala D-ala ligase N-terminus AMRN_RS04545 PF07478 D-ala D-ala ligase C-terminus AMRN_RS04555 PF08245 Mur ligase middle domain AMRN_RS04555 PF02875 Mur ligase family, glutamate ligase domain AMRN_RS04560 PF01230 HIT domain AMRN_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS04580 PF00005 ABC transporter AMRN_RS04590 PF01266 FAD dependent oxidoreductase AMRN_RS04595 PF00905 Penicillin binding protein transpeptidase domain AMRN_RS04615 PF00338 Ribosomal protein S10p/S20e AMRN_RS04620 PF00297 Ribosomal protein L3 AMRN_RS04625 PF00573 Ribosomal protein L4/L1 family AMRN_RS04630 PF00276 Ribosomal protein L23 AMRN_RS04635 PF00181 Ribosomal Proteins L2, RNA binding domain AMRN_RS04635 PF03947 Ribosomal Proteins L2, C-terminal domain AMRN_RS04640 PF00203 Ribosomal protein S19 AMRN_RS04645 PF00237 Ribosomal protein L22p/L17e AMRN_RS04650 PF07650 KH domain AMRN_RS04650 PF00189 Ribosomal protein S3, C-terminal domain AMRN_RS04655 PF00252 Ribosomal protein L16p/L10e AMRN_RS04660 PF00831 Ribosomal L29 protein AMRN_RS04665 PF00366 Ribosomal protein S17 AMRN_RS04670 PF00238 Ribosomal protein L14p/L23e AMRN_RS04675 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMRN_RS04675 PF00467 KOW motif AMRN_RS04680 PF00281 Ribosomal protein L5 AMRN_RS04680 PF00673 ribosomal L5P family C-terminus AMRN_RS04685 PF00253 Ribosomal protein S14p/S29e AMRN_RS04690 PF00410 Ribosomal protein S8 AMRN_RS04695 PF00347 Ribosomal protein L6 AMRN_RS04700 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMRN_RS04705 PF03719 Ribosomal protein S5, C-terminal domain AMRN_RS04705 PF00333 Ribosomal protein S5, N-terminal domain AMRN_RS04710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMRN_RS04715 PF00344 SecY translocase AMRN_RS04720 PF00557 Metallopeptidase family M24 AMRN_RS04725 PF01176 Translation initiation factor 1A / IF-1 AMRN_RS04730 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS04740 PF03167 Uracil DNA glycosylase superfamily AMRN_RS04750 PF00152 tRNA synthetases class II (D, K and N) AMRN_RS04750 PF01336 OB-fold nucleic acid binding domain AMRN_RS04750 PF02938 GAD domain AMRN_RS04765 PF08497 Radical SAM N-terminal AMRN_RS04765 PF04055 Radical SAM superfamily AMRN_RS04785 PF01168 Alanine racemase, N-terminal domain AMRN_RS04785 PF00842 Alanine racemase, C-terminal domain AMRN_RS04790 PF02151 UvrB/uvrC motif AMRN_RS04790 PF08459 UvrC Helix-hairpin-helix N-terminal AMRN_RS04790 PF01541 GIY-YIG catalytic domain AMRN_RS04805 PF04973 Nicotinamide mononucleotide transporter AMRN_RS04825 PF00684 DnaJ central domain AMRN_RS04825 PF01556 DnaJ C terminal domain AMRN_RS04825 PF00226 DnaJ domain AMRN_RS04830 PF02652 L-lactate permease AMRN_RS04835 PF00672 HAMP domain AMRN_RS04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS04835 PF17200 Single Cache domain 2 AMRN_RS04840 PF00684 DnaJ central domain AMRN_RS04840 PF01556 DnaJ C terminal domain AMRN_RS04840 PF00226 DnaJ domain AMRN_RS04855 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AMRN_RS04860 PF03372 Endonuclease/Exonuclease/phosphatase family AMRN_RS04885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMRN_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS04905 PF00210 Ferritin-like domain AMRN_RS04910 PF02833 DHHA2 domain AMRN_RS04910 PF01368 DHH family AMRN_RS04920 PF00491 Arginase family AMRN_RS04935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMRN_RS04940 PF04073 Aminoacyl-tRNA editing domain AMRN_RS04945 PF05088 Bacterial NAD-glutamate dehydrogenase AMRN_RS04965 PF11066 Protein of unknown function (DUF2867) AMRN_RS04965 PF13460 NAD(P)H-binding AMRN_RS04970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMRN_RS04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMRN_RS04985 PF03707 Bacterial signalling protein N terminal repeat AMRN_RS04985 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS04985 PF00563 EAL domain AMRN_RS04990 PF00183 Hsp90 protein AMRN_RS05015 PF03466 LysR substrate binding domain AMRN_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS05020 PF00183 Hsp90 protein AMRN_RS05030 PF13533 Biotin-lipoyl like AMRN_RS05035 PF07869 Protein of unknown function (DUF1656) AMRN_RS05050 PF01047 MarR family AMRN_RS05075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS05075 PF08269 Cache domain AMRN_RS05080 PF02203 Tar ligand binding domain homologue AMRN_RS05080 PF00672 HAMP domain AMRN_RS05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS05085 PF12833 Helix-turn-helix domain AMRN_RS05085 PF00072 Response regulator receiver domain AMRN_RS05090 PF03480 Bacterial extracellular solute-binding protein, family 7 AMRN_RS05100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMRN_RS05105 PF03746 LamB/YcsF family AMRN_RS05115 PF02626 Carboxyltransferase domain, subdomain A and B AMRN_RS05125 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS05125 PF10442 FIST C domain AMRN_RS05125 PF08495 FIST N domain AMRN_RS05125 PF00563 EAL domain AMRN_RS05140 PF17674 HHH domain AMRN_RS05140 PF16921 Tex protein YqgF-like domain AMRN_RS05140 PF09371 Tex-like protein N-terminal domain AMRN_RS05140 PF00575 S1 RNA binding domain AMRN_RS05150 PF17827 PrmC N-terminal domain AMRN_RS05150 PF13847 Methyltransferase domain AMRN_RS05155 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMRN_RS05160 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AMRN_RS05175 PF13462 Thioredoxin AMRN_RS05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS05195 PF02254 TrkA-N domain AMRN_RS05195 PF00999 Sodium/hydrogen exchanger family AMRN_RS05200 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS05200 PF00072 Response regulator receiver domain AMRN_RS05205 PF01965 DJ-1/PfpI family AMRN_RS05215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMRN_RS05215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMRN_RS05230 PF12792 CSS motif domain associated with EAL AMRN_RS05230 PF00563 EAL domain AMRN_RS05235 PF02600 Disulfide bond formation protein DsbB AMRN_RS05245 PF00578 AhpC/TSA family AMRN_RS05250 PF12833 Helix-turn-helix domain AMRN_RS05255 PF02785 Biotin carboxylase C-terminal domain AMRN_RS05255 PF00289 Biotin carboxylase, N-terminal domain AMRN_RS05255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMRN_RS05260 PF00484 Carbonic anhydrase AMRN_RS05265 PF03737 Aldolase/RraA AMRN_RS05280 PF00194 Eukaryotic-type carbonic anhydrase AMRN_RS05305 PF12833 Helix-turn-helix domain AMRN_RS05345 PF09308 LuxQ, periplasmic AMRN_RS05345 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS05345 PF00072 Response regulator receiver domain AMRN_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS05350 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS05350 PF00672 HAMP domain AMRN_RS05350 PF00072 Response regulator receiver domain AMRN_RS05350 PF01627 Hpt domain AMRN_RS05350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMRN_RS05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS05355 PF08448 PAS fold AMRN_RS05355 PF08447 PAS fold AMRN_RS05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS05360 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS05360 PF00072 Response regulator receiver domain AMRN_RS05390 PF01476 LysM domain AMRN_RS05390 PF08525 Opacity-associated protein A N-terminal motif AMRN_RS05390 PF01551 Peptidase family M23 AMRN_RS05395 PF01709 Transcriptional regulator AMRN_RS05400 PF00672 HAMP domain AMRN_RS05400 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS05400 PF00072 Response regulator receiver domain AMRN_RS05400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMRN_RS05400 PF01627 Hpt domain AMRN_RS05405 PF01435 Peptidase family M48 AMRN_RS05405 PF07720 Tetratricopeptide repeat AMRN_RS05420 PF02770 Acyl-CoA dehydrogenase, middle domain AMRN_RS05420 PF09317 Domain of unknown function (DUF1974) AMRN_RS05420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMRN_RS05420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMRN_RS05425 PF11791 Aconitate B N-terminal domain AMRN_RS05425 PF06434 Aconitate hydratase 2 N-terminus AMRN_RS05425 PF00330 Aconitase family (aconitate hydratase) AMRN_RS05430 PF00440 Bacterial regulatory proteins, tetR family AMRN_RS05430 PF18665 Tetracyclin repressor-like, C-terminal domain AMRN_RS05435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AMRN_RS05435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMRN_RS05445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMRN_RS05445 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMRN_RS05445 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AMRN_RS05450 PF00374 Nickel-dependent hydrogenase AMRN_RS05455 PF01292 Prokaryotic cytochrome b561 AMRN_RS05460 PF01750 Hydrogenase maturation protease AMRN_RS05470 PF17788 HypF Kae1-like domain AMRN_RS05470 PF07503 HypF finger AMRN_RS05470 PF00708 Acylphosphatase AMRN_RS05470 PF01300 Telomere recombination AMRN_RS05475 PF00209 Sodium:neurotransmitter symporter family AMRN_RS05480 PF12823 Domain of unknown function (DUF3817) AMRN_RS05485 PF00672 HAMP domain AMRN_RS05485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS05485 PF02203 Tar ligand binding domain homologue AMRN_RS05495 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMRN_RS05500 PF01455 HupF/HypC family AMRN_RS05505 PF01924 Hydrogenase formation hypA family AMRN_RS05510 PF02769 AIR synthase related protein, C-terminal domain AMRN_RS05510 PF00586 AIR synthase related protein, N-terminal domain AMRN_RS05515 PF00378 Enoyl-CoA hydratase/isomerase AMRN_RS05515 PF02911 Formyl transferase, C-terminal domain AMRN_RS05515 PF00551 Formyl transferase AMRN_RS05520 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AMRN_RS05525 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS05535 PF14824 Sirohaem biosynthesis protein central AMRN_RS05535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS05535 PF10414 Sirohaem synthase dimerisation region AMRN_RS05555 PF00271 Helicase conserved C-terminal domain AMRN_RS05555 PF17764 3′ DNA-binding domain (3′BD) AMRN_RS05555 PF18074 Primosomal protein N C-terminal domain AMRN_RS05555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMRN_RS05555 PF00270 DEAD/DEAH box helicase AMRN_RS05560 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMRN_RS05560 PF14602 Hexapeptide repeat of succinyl-transferase AMRN_RS05570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMRN_RS05590 PF00005 ABC transporter AMRN_RS05595 PF02390 Putative methyltransferase AMRN_RS05605 PF01479 S4 domain AMRN_RS05605 PF00849 RNA pseudouridylate synthase AMRN_RS05610 PF01098 Cell cycle protein AMRN_RS05620 PF00202 Aminotransferase class-III AMRN_RS05640 PF04539 Sigma-70 region 3 AMRN_RS05640 PF04545 Sigma-70, region 4 AMRN_RS05640 PF00140 Sigma-70 factor, region 1.2 AMRN_RS05640 PF04542 Sigma-70 region 2 AMRN_RS05645 PF00694 Aconitase C-terminal domain AMRN_RS05650 PF00180 Isocitrate/isopropylmalate dehydrogenase AMRN_RS05665 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS05675 PF00444 Ribosomal protein L36 AMRN_RS05680 PF00416 Ribosomal protein S13/S18 AMRN_RS05685 PF00411 Ribosomal protein S11 AMRN_RS05690 PF01479 S4 domain AMRN_RS05690 PF00163 Ribosomal protein S4/S9 N-terminal domain AMRN_RS05695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMRN_RS05695 PF01000 RNA polymerase Rpb3/RpoA insert domain AMRN_RS05695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMRN_RS05700 PF01196 Ribosomal protein L17 AMRN_RS05705 PF01425 Amidase AMRN_RS05710 PF00478 IMP dehydrogenase / GMP reductase domain AMRN_RS05710 PF00571 CBS domain AMRN_RS05770 PF03641 Possible lysine decarboxylase AMRN_RS05795 PF00561 alpha/beta hydrolase fold AMRN_RS05805 PF04002 RadC-like JAB domain AMRN_RS05825 PF04851 Type III restriction enzyme, res subunit AMRN_RS05825 PF00271 Helicase conserved C-terminal domain AMRN_RS05825 PF08463 EcoEI R protein C-terminal AMRN_RS05825 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AMRN_RS05830 PF00899 ThiF family AMRN_RS05835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMRN_RS05835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMRN_RS05835 PF02142 MGS-like domain AMRN_RS05870 PF12320 Type 5 capsule protein repressor C-terminal domain AMRN_RS05870 PF00149 Calcineurin-like phosphoesterase AMRN_RS05875 PF13476 AAA domain AMRN_RS05910 PF13087 AAA domain AMRN_RS05910 PF13091 PLD-like domain AMRN_RS05920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMRN_RS05920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMRN_RS05930 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS05935 PF01042 Endoribonuclease L-PSP AMRN_RS05940 PF07885 Ion channel AMRN_RS05945 PF13407 Periplasmic binding protein domain AMRN_RS05950 PF08448 PAS fold AMRN_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS05950 PF08447 PAS fold AMRN_RS05955 PF01047 MarR family AMRN_RS05965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMRN_RS05970 PF00873 AcrB/AcrD/AcrF family AMRN_RS05975 PF00440 Bacterial regulatory proteins, tetR family AMRN_RS05980 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS05985 PF01761 3-dehydroquinate synthase AMRN_RS05995 PF04055 Radical SAM superfamily AMRN_RS05995 PF00919 Uncharacterized protein family UPF0004 AMRN_RS06000 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS06000 PF17862 AAA+ lid domain AMRN_RS06000 PF01434 Peptidase family M41 AMRN_RS06010 PF00994 Probable molybdopterin binding domain AMRN_RS06015 PF00939 Sodium:sulfate symporter transmembrane region AMRN_RS06020 PF00488 MutS domain V AMRN_RS06020 PF01713 Smr domain AMRN_RS06025 PF00924 Mechanosensitive ion channel AMRN_RS06025 PF05552 Conserved TM helix AMRN_RS06040 PF01546 Peptidase family M20/M25/M40 AMRN_RS06040 PF07687 Peptidase dimerisation domain AMRN_RS06050 PF13673 Acetyltransferase (GNAT) domain AMRN_RS06070 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMRN_RS06080 PF02311 AraC-like ligand binding domain AMRN_RS06080 PF12833 Helix-turn-helix domain AMRN_RS06085 PF00155 Aminotransferase class I and II AMRN_RS06085 PF00392 Bacterial regulatory proteins, gntR family AMRN_RS06090 PF03473 MOSC domain AMRN_RS06115 PF03600 Citrate transporter AMRN_RS06130 PF08274 PhnA Zinc-Ribbon AMRN_RS06130 PF03831 PhnA domain AMRN_RS06135 PF12833 Helix-turn-helix domain AMRN_RS06185 PF02525 Flavodoxin-like fold AMRN_RS06195 PF00881 Nitroreductase family AMRN_RS06205 PF01593 Flavin containing amine oxidoreductase AMRN_RS06210 PF02203 Tar ligand binding domain homologue AMRN_RS06210 PF00672 HAMP domain AMRN_RS06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06215 PF08447 PAS fold AMRN_RS06215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06220 PF03109 ABC1 family AMRN_RS06235 PF08212 Lipocalin-like domain AMRN_RS06250 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMRN_RS06255 PF00563 EAL domain AMRN_RS06255 PF12792 CSS motif domain associated with EAL AMRN_RS06260 PF02581 Thiamine monophosphate synthase AMRN_RS06265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMRN_RS06265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMRN_RS06275 PF00005 ABC transporter AMRN_RS06275 PF08402 TOBE domain AMRN_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS06295 PF03459 TOBE domain AMRN_RS06300 PF00072 Response regulator receiver domain AMRN_RS06305 PF01739 CheR methyltransferase, SAM binding domain AMRN_RS06305 PF03705 CheR methyltransferase, all-alpha domain AMRN_RS06310 PF00672 HAMP domain AMRN_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS06310 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS06310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMRN_RS06310 PF01627 Hpt domain AMRN_RS06310 PF00072 Response regulator receiver domain AMRN_RS06315 PF12848 ABC transporter AMRN_RS06315 PF00005 ABC transporter AMRN_RS06330 PF03061 Thioesterase superfamily AMRN_RS06335 PF03061 Thioesterase superfamily AMRN_RS06340 PF00533 BRCA1 C Terminus (BRCT) domain AMRN_RS06340 PF01653 NAD-dependent DNA ligase adenylation domain AMRN_RS06340 PF12826 Helix-hairpin-helix motif AMRN_RS06340 PF03120 NAD-dependent DNA ligase OB-fold domain AMRN_RS06350 PF01613 Flavin reductase like domain AMRN_RS06355 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS06360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06360 PF02203 Tar ligand binding domain homologue AMRN_RS06360 PF00672 HAMP domain AMRN_RS06365 PF10415 Fumarase C C-terminus AMRN_RS06365 PF00206 Lyase AMRN_RS06385 PF01575 MaoC like domain AMRN_RS06390 PF13193 AMP-binding enzyme C-terminal domain AMRN_RS06390 PF00501 AMP-binding enzyme AMRN_RS06405 PF07687 Peptidase dimerisation domain AMRN_RS06405 PF01546 Peptidase family M20/M25/M40 AMRN_RS06410 PF00563 EAL domain AMRN_RS06410 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06410 PF08495 FIST N domain AMRN_RS06410 PF10442 FIST C domain AMRN_RS06415 PF01578 Cytochrome C assembly protein AMRN_RS06415 PF05140 ResB-like family AMRN_RS06420 PF08003 Protein of unknown function (DUF1698) AMRN_RS06425 PF00563 EAL domain AMRN_RS06425 PF01590 GAF domain AMRN_RS06425 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06425 PF00360 Phytochrome region AMRN_RS06430 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06430 PF03707 Bacterial signalling protein N terminal repeat AMRN_RS06430 PF00563 EAL domain AMRN_RS06440 PF04305 Protein of unknown function (DUF455) AMRN_RS06445 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS06455 PF00226 DnaJ domain AMRN_RS06455 PF01556 DnaJ C terminal domain AMRN_RS06455 PF00684 DnaJ central domain AMRN_RS06460 PF13662 Toprim domain AMRN_RS06460 PF02132 RecR protein AMRN_RS06465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMRN_RS06475 PF00881 Nitroreductase family AMRN_RS06480 PF01638 HxlR-like helix-turn-helix AMRN_RS06485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06485 PF08447 PAS fold AMRN_RS06490 PF00672 HAMP domain AMRN_RS06490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06490 PF02203 Tar ligand binding domain homologue AMRN_RS06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS06500 PF08447 PAS fold AMRN_RS06500 PF08448 PAS fold AMRN_RS06510 PF00795 Carbon-nitrogen hydrolase AMRN_RS06510 PF00583 Acetyltransferase (GNAT) family AMRN_RS06515 PF00072 Response regulator receiver domain AMRN_RS06515 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06520 PF08448 PAS fold AMRN_RS06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS06520 PF08447 PAS fold AMRN_RS06525 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS06525 PF00072 Response regulator receiver domain AMRN_RS06535 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS06560 PF00764 Arginosuccinate synthase AMRN_RS06570 PF00591 Glycosyl transferase family, a/b domain AMRN_RS06570 PF02885 Glycosyl transferase family, helical bundle domain AMRN_RS06575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMRN_RS06580 PF00005 ABC transporter AMRN_RS06580 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMRN_RS06585 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06585 PF08448 PAS fold AMRN_RS06590 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS06590 PF00563 EAL domain AMRN_RS06590 PF08448 PAS fold AMRN_RS06595 PF02348 Cytidylyltransferase AMRN_RS06600 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS06600 PF02743 Cache domain AMRN_RS06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS06605 PF01367 5'-3' exonuclease, C-terminal SAM fold AMRN_RS06605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMRN_RS06605 PF00476 DNA polymerase family A AMRN_RS06610 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS06610 PF00072 Response regulator receiver domain AMRN_RS06625 PF08447 PAS fold AMRN_RS06625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS06630 PF01790 Prolipoprotein diacylglyceryl transferase AMRN_RS06640 PF06969 HemN C-terminal domain AMRN_RS06640 PF04055 Radical SAM superfamily AMRN_RS06645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMRN_RS06645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMRN_RS06660 PF04055 Radical SAM superfamily AMRN_RS06665 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS06665 PF00072 Response regulator receiver domain AMRN_RS06670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMRN_RS06670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMRN_RS06685 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS06685 PF00989 PAS fold AMRN_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS06690 PF00490 Delta-aminolevulinic acid dehydratase AMRN_RS06695 PF00925 GTP cyclohydrolase II AMRN_RS06700 PF02527 rRNA small subunit methyltransferase G AMRN_RS06715 PF02092 Glycyl-tRNA synthetase beta subunit AMRN_RS06750 PF00925 GTP cyclohydrolase II AMRN_RS06750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMRN_RS06755 PF01293 Phosphoenolpyruvate carboxykinase AMRN_RS06760 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMRN_RS06765 PF08502 LeuA allosteric (dimerisation) domain AMRN_RS06765 PF00682 HMGL-like AMRN_RS06770 PF04277 Oxaloacetate decarboxylase, gamma chain AMRN_RS06785 PF00133 tRNA synthetases class I (I, L, M and V) AMRN_RS06785 PF09334 tRNA synthetases class I (M) AMRN_RS06785 PF01588 Putative tRNA binding domain AMRN_RS06795 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMRN_RS06815 PF02325 YGGT family AMRN_RS06820 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMRN_RS06825 PF05193 Peptidase M16 inactive domain AMRN_RS06830 PF04055 Radical SAM superfamily AMRN_RS06835 PF07244 Surface antigen variable number repeat AMRN_RS06835 PF01103 Surface antigen AMRN_RS06840 PF02153 Prephenate dehydrogenase AMRN_RS06840 PF01842 ACT domain AMRN_RS06845 PF00809 Pterin binding enzyme AMRN_RS06860 PF13840 ACT domain AMRN_RS06860 PF01842 ACT domain AMRN_RS06860 PF00696 Amino acid kinase family AMRN_RS06865 PF00293 NUDIX domain AMRN_RS06870 PF06969 HemN C-terminal domain AMRN_RS06870 PF04055 Radical SAM superfamily AMRN_RS06875 PF17827 PrmC N-terminal domain AMRN_RS06875 PF13847 Methyltransferase domain AMRN_RS06880 PF01432 Peptidase family M3 AMRN_RS06895 PF01903 CbiX AMRN_RS06910 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMRN_RS06920 PF05947 Type VI secretion system, TssF AMRN_RS06930 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS06930 PF10431 C-terminal, D2-small domain, of ClpB protein AMRN_RS06930 PF07724 AAA domain (Cdc48 subfamily) AMRN_RS06930 PF17871 AAA lid domain AMRN_RS06945 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMRN_RS06965 PF03793 PASTA domain AMRN_RS06965 PF00069 Protein kinase domain AMRN_RS06970 PF05638 Type VI secretion system effector, Hcp AMRN_RS06975 PF04717 Type VI secretion system, phage-baseplate injector AMRN_RS07080 PF00589 Phage integrase family AMRN_RS07080 PF18644 Phage integrase SAM-like domain AMRN_RS07085 PF01339 CheB methylesterase AMRN_RS07085 PF00072 Response regulator receiver domain AMRN_RS07090 PF03975 CheD chemotactic sensory transduction AMRN_RS07095 PF03705 CheR methyltransferase, all-alpha domain AMRN_RS07095 PF01739 CheR methyltransferase, SAM binding domain AMRN_RS07100 PF09078 CheY binding AMRN_RS07100 PF01584 CheW-like domain AMRN_RS07100 PF02895 Signal transducing histidine kinase, homodimeric domain AMRN_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS07100 PF01627 Hpt domain AMRN_RS07105 PF00072 Response regulator receiver domain AMRN_RS07110 PF00013 KH domain AMRN_RS07110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMRN_RS07110 PF01138 3' exoribonuclease family, domain 1 AMRN_RS07110 PF03725 3' exoribonuclease family, domain 2 AMRN_RS07110 PF00575 S1 RNA binding domain AMRN_RS07120 PF04453 LPS transport system D AMRN_RS07120 PF03968 OstA-like protein AMRN_RS07130 PF02843 Phosphoribosylglycinamide synthetase, C domain AMRN_RS07130 PF02844 Phosphoribosylglycinamide synthetase, N domain AMRN_RS07130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMRN_RS07140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMRN_RS07140 PF01926 50S ribosome-binding GTPase AMRN_RS07145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMRN_RS07145 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMRN_RS07150 PF17854 FtsK alpha domain AMRN_RS07150 PF09397 Ftsk gamma domain AMRN_RS07150 PF01580 FtsK/SpoIIIE family AMRN_RS07155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMRN_RS07155 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS07160 PF10369 Small subunit of acetolactate synthase AMRN_RS07165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMRN_RS07165 PF00205 Thiamine pyrophosphate enzyme, central domain AMRN_RS07165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMRN_RS07170 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS07170 PF07196 Flagellin hook IN motif AMRN_RS07170 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS07175 PF02541 Ppx/GppA phosphatase family AMRN_RS07185 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS07185 PF00563 EAL domain AMRN_RS07185 PF01590 GAF domain AMRN_RS07185 PF00360 Phytochrome region AMRN_RS07200 PF00085 Thioredoxin AMRN_RS07210 PF04463 Protein of unknown function (DUF523) AMRN_RS07215 PF01171 PP-loop family AMRN_RS07220 PF03553 Na+/H+ antiporter family AMRN_RS07220 PF13726 Na+-H+ antiporter family AMRN_RS07230 PF18030 RimK PreATP-grasp domain AMRN_RS07230 PF08443 RimK-like ATP-grasp domain AMRN_RS07245 PF00171 Aldehyde dehydrogenase family AMRN_RS07250 PF00005 ABC transporter AMRN_RS07255 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMRN_RS07255 PF00005 ABC transporter AMRN_RS07260 PF02653 Branched-chain amino acid transport system / permease component AMRN_RS07260 PF11862 Domain of unknown function (DUF3382) AMRN_RS07265 PF02653 Branched-chain amino acid transport system / permease component AMRN_RS07290 PF00072 Response regulator receiver domain AMRN_RS07290 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS07310 PF00994 Probable molybdopterin binding domain AMRN_RS07310 PF03454 MoeA C-terminal region (domain IV) AMRN_RS07310 PF03453 MoeA N-terminal region (domain I and II) AMRN_RS07320 PF07690 Major Facilitator Superfamily AMRN_RS07325 PF02646 RmuC family AMRN_RS07330 PF16491 CAAX prenyl protease N-terminal, five membrane helices AMRN_RS07330 PF01435 Peptidase family M48 AMRN_RS07340 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS07340 PF00989 PAS fold AMRN_RS07340 PF08447 PAS fold AMRN_RS07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS07345 PF03061 Thioesterase superfamily AMRN_RS07350 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS07360 PF00248 Aldo/keto reductase family AMRN_RS07375 PF04336 Acyl carrier protein phosphodiesterase AMRN_RS07380 PF01032 FecCD transport family AMRN_RS07385 PF00005 ABC transporter AMRN_RS07390 PF01497 Periplasmic binding protein AMRN_RS07395 PF00593 TonB dependent receptor AMRN_RS07395 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS07405 PF01636 Phosphotransferase enzyme family AMRN_RS07410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS07425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMRN_RS07425 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMRN_RS07430 PF02570 Precorrin-8X methylmutase AMRN_RS07440 PF01888 CbiD AMRN_RS07445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS07450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS07455 PF11760 Cobalamin synthesis G N-terminal AMRN_RS07455 PF01890 Cobalamin synthesis G C-terminus AMRN_RS07455 PF11761 Cobalamin biosynthesis central region AMRN_RS07460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMRN_RS07460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMRN_RS07480 PF00005 ABC transporter AMRN_RS07480 PF09383 NIL domain AMRN_RS07495 PF13419 Haloacid dehalogenase-like hydrolase AMRN_RS07505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS07505 PF00672 HAMP domain AMRN_RS07515 PF02472 Biopolymer transport protein ExbD/TolR AMRN_RS07520 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS07530 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS07530 PF00072 Response regulator receiver domain AMRN_RS07545 PF00588 SpoU rRNA Methylase family AMRN_RS07550 PF01842 ACT domain AMRN_RS07550 PF00551 Formyl transferase AMRN_RS07555 PF00390 Malic enzyme, N-terminal domain AMRN_RS07555 PF03949 Malic enzyme, NAD binding domain AMRN_RS07555 PF01515 Phosphate acetyl/butaryl transferase AMRN_RS07560 PF02578 Multi-copper polyphenol oxidoreductase laccase AMRN_RS07565 PF08501 Shikimate dehydrogenase substrate binding domain AMRN_RS07595 PF07729 FCD domain AMRN_RS07595 PF00392 Bacterial regulatory proteins, gntR family AMRN_RS07600 PF07690 Major Facilitator Superfamily AMRN_RS07605 PF02926 THUMP domain AMRN_RS07605 PF02568 Thiamine biosynthesis protein (ThiI) AMRN_RS07615 PF03738 Glutathionylspermidine synthase preATP-grasp AMRN_RS07625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMRN_RS07630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS07635 PF02540 NAD synthase AMRN_RS07655 PF05099 Tellurite resistance protein TerB AMRN_RS07655 PF00226 DnaJ domain AMRN_RS07665 PF00902 Sec-independent protein translocase protein (TatC) AMRN_RS07670 PF02547 Queuosine biosynthesis protein AMRN_RS07675 PF00929 Exonuclease AMRN_RS07680 PF00209 Sodium:neurotransmitter symporter family AMRN_RS07690 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS07690 PF00072 Response regulator receiver domain AMRN_RS07695 PF12867 DinB superfamily AMRN_RS07695 PF03781 Sulfatase-modifying factor enzyme 1 AMRN_RS07710 PF02310 B12 binding domain AMRN_RS07715 PF06368 Methylaspartate mutase E chain (MutE) AMRN_RS07720 PF13941 MutL protein AMRN_RS07725 PF13193 AMP-binding enzyme C-terminal domain AMRN_RS07725 PF00668 Condensation domain AMRN_RS07725 PF00501 AMP-binding enzyme AMRN_RS07725 PF00550 Phosphopantetheine attachment site AMRN_RS07730 PF00034 Cytochrome c AMRN_RS07735 PF17156 Gammaproteobacterial periplasmic sensor domain AMRN_RS07735 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS07750 PF01063 Amino-transferase class IV AMRN_RS07755 PF00873 AcrB/AcrD/AcrF family AMRN_RS07765 PF01795 MraW methylase family AMRN_RS07775 PF00216 Bacterial DNA-binding protein AMRN_RS07800 PF07722 Peptidase C26 AMRN_RS07810 PF00583 Acetyltransferase (GNAT) family AMRN_RS07815 PF00202 Aminotransferase class-III AMRN_RS07820 PF06339 Ectoine synthase AMRN_RS07835 PF00696 Amino acid kinase family AMRN_RS07835 PF13840 ACT domain AMRN_RS07845 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS07845 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS07855 PF00034 Cytochrome c AMRN_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS07870 PF00072 Response regulator receiver domain AMRN_RS07870 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS07920 PF00529 HlyD membrane-fusion protein of T1SS AMRN_RS07925 PF03412 Peptidase C39 family AMRN_RS07925 PF00005 ABC transporter AMRN_RS07925 PF00664 ABC transporter transmembrane region AMRN_RS07960 PF00563 EAL domain AMRN_RS07960 PF08495 FIST N domain AMRN_RS07960 PF10442 FIST C domain AMRN_RS07960 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS07965 PF00672 HAMP domain AMRN_RS07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS07965 PF02203 Tar ligand binding domain homologue AMRN_RS07970 PF00664 ABC transporter transmembrane region AMRN_RS07970 PF00005 ABC transporter AMRN_RS07975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMRN_RS07995 PF03548 Outer membrane lipoprotein carrier protein LolA AMRN_RS08000 PF00271 Helicase conserved C-terminal domain AMRN_RS08000 PF02810 SEC-C motif AMRN_RS08000 PF07517 SecA DEAD-like domain AMRN_RS08000 PF01043 SecA preprotein cross-linking domain AMRN_RS08000 PF07516 SecA Wing and Scaffold domain AMRN_RS08005 PF12704 MacB-like periplasmic core domain AMRN_RS08005 PF02687 FtsX-like permease family AMRN_RS08015 PF02618 YceG-like family AMRN_RS08020 PF03971 Monomeric isocitrate dehydrogenase AMRN_RS08030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMRN_RS08030 PF01266 FAD dependent oxidoreductase AMRN_RS08040 PF00072 Response regulator receiver domain AMRN_RS08050 PF08447 PAS fold AMRN_RS08050 PF08448 PAS fold AMRN_RS08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS08055 PF00226 DnaJ domain AMRN_RS08055 PF01556 DnaJ C terminal domain AMRN_RS08060 PF13411 MerR HTH family regulatory protein AMRN_RS08065 PF00091 Tubulin/FtsZ family, GTPase domain AMRN_RS08065 PF12327 FtsZ family, C-terminal domain AMRN_RS08070 PF02491 SHS2 domain inserted in FTSA AMRN_RS08080 PF13538 UvrD-like helicase C-terminal domain AMRN_RS08080 PF14490 Helix-hairpin-helix containing domain AMRN_RS08080 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMRN_RS08090 PF03960 ArsC family AMRN_RS08105 PF01312 FlhB HrpN YscU SpaS Family AMRN_RS08115 PF03717 Penicillin-binding Protein dimerisation domain AMRN_RS08115 PF00905 Penicillin binding protein transpeptidase domain AMRN_RS08120 PF00813 FliP family AMRN_RS08135 PF00873 AcrB/AcrD/AcrF family AMRN_RS08140 PF00873 AcrB/AcrD/AcrF family AMRN_RS08145 PF00578 AhpC/TSA family AMRN_RS08150 PF00583 Acetyltransferase (GNAT) family AMRN_RS08155 PF01926 50S ribosome-binding GTPase AMRN_RS08175 PF00475 Imidazoleglycerol-phosphate dehydratase AMRN_RS08180 PF03330 Lytic transglycolase AMRN_RS08180 PF05036 Sporulation related domain AMRN_RS08185 PF01464 Transglycosylase SLT domain AMRN_RS08190 PF01026 TatD related DNase AMRN_RS08200 PF07724 AAA domain (Cdc48 subfamily) AMRN_RS08200 PF10431 C-terminal, D2-small domain, of ClpB protein AMRN_RS08205 PF00227 Proteasome subunit AMRN_RS08210 PF03948 Ribosomal protein L9, C-terminal domain AMRN_RS08210 PF01281 Ribosomal protein L9, N-terminal domain AMRN_RS08220 PF02441 Flavoprotein AMRN_RS08225 PF01467 Cytidylyltransferase-like AMRN_RS08230 PF02223 Thymidylate kinase AMRN_RS08235 PF03129 Anticodon binding domain AMRN_RS08235 PF13393 Histidyl-tRNA synthetase AMRN_RS08240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMRN_RS08240 PF17944 Arginine decarboxylase C-terminal helical extension AMRN_RS08240 PF17810 Arginine decarboxylase helical bundle domain AMRN_RS08245 PF06426 Serine acetyltransferase, N-terminal AMRN_RS08245 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS08255 PF01546 Peptidase family M20/M25/M40 AMRN_RS08255 PF07687 Peptidase dimerisation domain AMRN_RS08260 PF00202 Aminotransferase class-III AMRN_RS08265 PF00171 Aldehyde dehydrogenase family AMRN_RS08270 PF00557 Metallopeptidase family M24 AMRN_RS08270 PF01321 Creatinase/Prolidase N-terminal domain AMRN_RS08280 PF17760 UvrA interaction domain AMRN_RS08280 PF17755 UvrA DNA-binding domain AMRN_RS08280 PF00005 ABC transporter AMRN_RS08290 PF00375 Sodium:dicarboxylate symporter family AMRN_RS08300 PF03471 Transporter associated domain AMRN_RS08300 PF00571 CBS domain AMRN_RS08300 PF01595 Cyclin M transmembrane N-terminal domain AMRN_RS08305 PF01243 Pyridoxamine 5'-phosphate oxidase AMRN_RS08315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMRN_RS08315 PF01243 Pyridoxamine 5'-phosphate oxidase AMRN_RS08320 PF00255 Glutathione peroxidase AMRN_RS08350 PF03180 NLPA lipoprotein AMRN_RS08355 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS08360 PF00005 ABC transporter AMRN_RS08360 PF09383 NIL domain AMRN_RS08365 PF07690 Major Facilitator Superfamily AMRN_RS08375 PF00375 Sodium:dicarboxylate symporter family AMRN_RS08380 PF10672 S-adenosylmethionine-dependent methyltransferase AMRN_RS08380 PF17785 PUA-like domain AMRN_RS08385 PF03449 Transcription elongation factor, N-terminal AMRN_RS08385 PF01272 Transcription elongation factor, GreA/GreB, C-term AMRN_RS08400 PF00384 Molybdopterin oxidoreductase AMRN_RS08400 PF18364 Molybdopterin oxidoreductase N-terminal domain AMRN_RS08400 PF01568 Molydopterin dinucleotide binding domain AMRN_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS08410 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS08410 PF00989 PAS fold AMRN_RS08415 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS08415 PF00072 Response regulator receiver domain AMRN_RS08420 PF00916 Sulfate permease family AMRN_RS08420 PF01740 STAS domain AMRN_RS08425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMRN_RS08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS08430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMRN_RS08430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMRN_RS08445 PF03749 Sugar fermentation stimulation protein RE domain AMRN_RS08445 PF17746 SfsA N-terminal OB domain AMRN_RS08460 PF07995 Glucose / Sorbosone dehydrogenase AMRN_RS08465 PF08482 ATP-dependent helicase C-terminal AMRN_RS08465 PF00270 DEAD/DEAH box helicase AMRN_RS08465 PF04408 Helicase associated domain (HA2) AMRN_RS08465 PF00271 Helicase conserved C-terminal domain AMRN_RS08495 PF00563 EAL domain AMRN_RS08495 PF08495 FIST N domain AMRN_RS08495 PF10442 FIST C domain AMRN_RS08495 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS08505 PF00561 alpha/beta hydrolase fold AMRN_RS08530 PF00313 'Cold-shock' DNA-binding domain AMRN_RS08545 PF00271 Helicase conserved C-terminal domain AMRN_RS08545 PF00270 DEAD/DEAH box helicase AMRN_RS08550 PF01479 S4 domain AMRN_RS08550 PF00849 RNA pseudouridylate synthase AMRN_RS08580 PF00672 HAMP domain AMRN_RS08580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS08580 PF02203 Tar ligand binding domain homologue AMRN_RS08620 PF02540 NAD synthase AMRN_RS08620 PF00958 GMP synthase C terminal domain AMRN_RS08620 PF00117 Glutamine amidotransferase class-I AMRN_RS08630 PF03600 Citrate transporter AMRN_RS08635 PF00890 FAD binding domain AMRN_RS08650 PF00155 Aminotransferase class I and II AMRN_RS08655 PF01545 Cation efflux family AMRN_RS08655 PF16916 Dimerisation domain of Zinc Transporter AMRN_RS08660 PF00672 HAMP domain AMRN_RS08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS08660 PF02203 Tar ligand binding domain homologue AMRN_RS08665 PF02203 Tar ligand binding domain homologue AMRN_RS08665 PF00672 HAMP domain AMRN_RS08665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS08670 PF08267 Cobalamin-independent synthase, N-terminal domain AMRN_RS08670 PF01717 Cobalamin-independent synthase, Catalytic domain AMRN_RS08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS08680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMRN_RS08685 PF00364 Biotin-requiring enzyme AMRN_RS08685 PF02817 e3 binding domain AMRN_RS08685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMRN_RS08690 PF00456 Transketolase, thiamine diphosphate binding domain AMRN_RS08690 PF17831 Pyruvate dehydrogenase E1 component middle domain AMRN_RS08700 PF04055 Radical SAM superfamily AMRN_RS08705 PF00056 lactate/malate dehydrogenase, NAD binding domain AMRN_RS08705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMRN_RS08720 PF12848 ABC transporter AMRN_RS08720 PF00005 ABC transporter AMRN_RS08720 PF16326 ABC transporter C-terminal domain AMRN_RS08725 PF09424 Yqey-like protein AMRN_RS08730 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS08735 PF01966 HD domain AMRN_RS08740 PF00563 EAL domain AMRN_RS08740 PF13188 PAS domain AMRN_RS08740 PF03707 Bacterial signalling protein N terminal repeat AMRN_RS08740 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS08755 PF13472 GDSL-like Lipase/Acylhydrolase family AMRN_RS08760 PF00005 ABC transporter AMRN_RS08775 PF03334 Na+/H+ antiporter subunit AMRN_RS08780 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMRN_RS08785 PF01899 Na+/H+ ion antiporter subunit AMRN_RS08790 PF00361 Proton-conducting membrane transporter AMRN_RS08795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMRN_RS08800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMRN_RS08800 PF00361 Proton-conducting membrane transporter AMRN_RS08800 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMRN_RS08800 PF13244 Domain of unknown function (DUF4040) AMRN_RS08805 PF00106 short chain dehydrogenase AMRN_RS08810 PF03553 Na+/H+ antiporter family AMRN_RS08815 PF12911 N-terminal TM domain of oligopeptide transport permease C AMRN_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS08825 PF00731 AIR carboxylase AMRN_RS08830 PF02222 ATP-grasp domain AMRN_RS08830 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMRN_RS08840 PF12072 Domain of unknown function (DUF3552) AMRN_RS08840 PF01966 HD domain AMRN_RS08840 PF00013 KH domain AMRN_RS08850 PF00578 AhpC/TSA family AMRN_RS08855 PF00448 SRP54-type protein, GTPase domain AMRN_RS08865 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS08865 PF00072 Response regulator receiver domain AMRN_RS08870 PF13426 PAS domain AMRN_RS08870 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS08870 PF00672 HAMP domain AMRN_RS08875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMRN_RS08880 PF05728 Uncharacterised protein family (UPF0227) AMRN_RS08895 PF02203 Tar ligand binding domain homologue AMRN_RS08895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS08895 PF00672 HAMP domain AMRN_RS08900 PF18073 Rubredoxin metal binding domain AMRN_RS08915 PF02130 Uncharacterized protein family UPF0054 AMRN_RS08920 PF01699 Sodium/calcium exchanger protein AMRN_RS08925 PF01475 Ferric uptake regulator family AMRN_RS08930 PF00210 Ferritin-like domain AMRN_RS08935 PF02915 Rubrerythrin AMRN_RS08970 PF03023 Lipid II flippase MurJ AMRN_RS08975 PF00664 ABC transporter transmembrane region AMRN_RS08975 PF00005 ABC transporter AMRN_RS08980 PF01180 Dihydroorotate dehydrogenase AMRN_RS08990 PF00701 Dihydrodipicolinate synthetase family AMRN_RS09000 PF01066 CDP-alcohol phosphatidyltransferase AMRN_RS09005 PF02163 Peptidase family M50 AMRN_RS09005 PF17820 PDZ domain AMRN_RS09010 PF01168 Alanine racemase, N-terminal domain AMRN_RS09025 PF08019 Phosphoethanolamine transferase EptA/EptB AMRN_RS09025 PF00884 Sulfatase AMRN_RS09030 PF01219 Prokaryotic diacylglycerol kinase AMRN_RS09035 PF00884 Sulfatase AMRN_RS09040 PF00872 Transposase, Mutator family AMRN_RS09045 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09045 PF11808 Phosphate regulon sensor protein PhoR AMRN_RS09045 PF00989 PAS fold AMRN_RS09050 PF00072 Response regulator receiver domain AMRN_RS09050 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS09060 PF18030 RimK PreATP-grasp domain AMRN_RS09060 PF08443 RimK-like ATP-grasp domain AMRN_RS09075 PF00218 Indole-3-glycerol phosphate synthase AMRN_RS09085 PF03692 Putative zinc- or iron-chelating domain AMRN_RS09090 PF05175 Methyltransferase small domain AMRN_RS09100 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMRN_RS09100 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMRN_RS09100 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMRN_RS09105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMRN_RS09105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMRN_RS09105 PF00205 Thiamine pyrophosphate enzyme, central domain AMRN_RS09115 PF00893 Small Multidrug Resistance protein AMRN_RS09125 PF04607 Region found in RelA / SpoT proteins AMRN_RS09125 PF02824 TGS domain AMRN_RS09125 PF13291 ACT domain AMRN_RS09130 PF14480 DNA polymerase III polC-type N-terminus I AMRN_RS09130 PF11490 DNA polymerase III polC-type N-terminus II AMRN_RS09130 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMRN_RS09130 PF14579 Helix-hairpin-helix motif AMRN_RS09130 PF02811 PHP domain AMRN_RS09130 PF00929 Exonuclease AMRN_RS09130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMRN_RS09135 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMRN_RS09140 PF00834 Ribulose-phosphate 3 epimerase family AMRN_RS09145 PF02470 MlaD protein AMRN_RS09150 PF04403 Paraquat-inducible protein A AMRN_RS09155 PF04403 Paraquat-inducible protein A AMRN_RS09160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMRN_RS09165 PF00873 AcrB/AcrD/AcrF family AMRN_RS09175 PF02253 Phospholipase A1 AMRN_RS09200 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AMRN_RS09200 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMRN_RS09200 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMRN_RS09210 PF05230 MASE2 domain AMRN_RS09210 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS09215 PF00023 Ankyrin repeat AMRN_RS09225 PF00293 NUDIX domain AMRN_RS09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09240 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS09240 PF00072 Response regulator receiver domain AMRN_RS09245 PF03601 Conserved hypothetical protein 698 AMRN_RS09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS09250 PF03466 LysR substrate binding domain AMRN_RS09260 PF04461 Protein of unknown function (DUF520) AMRN_RS09265 PF08448 PAS fold AMRN_RS09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09265 PF08447 PAS fold AMRN_RS09275 PF00860 Permease family AMRN_RS09290 PF04241 Protein of unknown function (DUF423) AMRN_RS09300 PF00156 Phosphoribosyl transferase domain AMRN_RS09305 PF00860 Permease family AMRN_RS09315 PF00155 Aminotransferase class I and II AMRN_RS09320 PF12833 Helix-turn-helix domain AMRN_RS09320 PF02311 AraC-like ligand binding domain AMRN_RS09325 PF11849 Domain of unknown function (DUF3369) AMRN_RS09330 PF01022 Bacterial regulatory protein, arsR family AMRN_RS09335 PF00403 Heavy-metal-associated domain AMRN_RS09340 PF00593 TonB dependent receptor AMRN_RS09340 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS09345 PF08448 PAS fold AMRN_RS09345 PF08447 PAS fold AMRN_RS09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09355 PF00072 Response regulator receiver domain AMRN_RS09355 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS09365 PF01568 Molydopterin dinucleotide binding domain AMRN_RS09365 PF18364 Molybdopterin oxidoreductase N-terminal domain AMRN_RS09365 PF00384 Molybdopterin oxidoreductase AMRN_RS09370 PF00465 Iron-containing alcohol dehydrogenase AMRN_RS09385 PF04023 FeoA domain AMRN_RS09390 PF17910 FeoB cytosolic helical domain AMRN_RS09390 PF07664 Ferrous iron transport protein B C terminus AMRN_RS09390 PF07670 Nucleoside recognition AMRN_RS09390 PF04023 FeoA domain AMRN_RS09390 PF02421 Ferrous iron transport protein B AMRN_RS09430 PF04055 Radical SAM superfamily AMRN_RS09435 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMRN_RS09445 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMRN_RS09445 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMRN_RS09450 PF03989 DNA gyrase C-terminal domain, beta-propeller AMRN_RS09450 PF00521 DNA gyrase/topoisomerase IV, subunit A AMRN_RS09460 PF01960 ArgJ family AMRN_RS09470 PF00830 Ribosomal L28 family AMRN_RS09480 PF13580 SIS domain AMRN_RS09485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMRN_RS09515 PF10707 PhoP regulatory network protein YrbL AMRN_RS09520 PF13439 Glycosyltransferase Family 4 AMRN_RS09520 PF00534 Glycosyl transferases group 1 AMRN_RS09525 PF00535 Glycosyl transferase family 2 AMRN_RS09540 PF07836 DmpG-like communication domain AMRN_RS09540 PF00682 HMGL-like AMRN_RS09570 PF01219 Prokaryotic diacylglycerol kinase AMRN_RS09580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMRN_RS09590 PF00037 4Fe-4S binding domain AMRN_RS09600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS09600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMRN_RS09605 PF01493 GXGXG motif AMRN_RS09605 PF04898 Glutamate synthase central domain AMRN_RS09605 PF00310 Glutamine amidotransferases class-II AMRN_RS09605 PF01645 Conserved region in glutamate synthase AMRN_RS09610 PF03480 Bacterial extracellular solute-binding protein, family 7 AMRN_RS09620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMRN_RS09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09625 PF08447 PAS fold AMRN_RS09625 PF08448 PAS fold AMRN_RS09630 PF00072 Response regulator receiver domain AMRN_RS09630 PF12833 Helix-turn-helix domain AMRN_RS09645 PF00962 Adenosine/AMP deaminase AMRN_RS09650 PF01966 HD domain AMRN_RS09650 PF13286 Phosphohydrolase-associated domain AMRN_RS09660 PF01361 Tautomerase enzyme AMRN_RS09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS09670 PF03466 LysR substrate binding domain AMRN_RS09695 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMRN_RS09695 PF00933 Glycosyl hydrolase family 3 N terminal domain AMRN_RS09700 PF13687 Domain of unknown function (DUF4153) AMRN_RS09715 PF01226 Formate/nitrite transporter AMRN_RS09730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMRN_RS09740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMRN_RS09740 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMRN_RS09740 PF00374 Nickel-dependent hydrogenase AMRN_RS09745 PF00361 Proton-conducting membrane transporter AMRN_RS09745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMRN_RS09750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMRN_RS09755 PF00146 NADH dehydrogenase AMRN_RS09760 PF00361 Proton-conducting membrane transporter AMRN_RS09765 PF13247 4Fe-4S dicluster domain AMRN_RS09770 PF01568 Molydopterin dinucleotide binding domain AMRN_RS09770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS09770 PF00384 Molybdopterin oxidoreductase AMRN_RS09775 PF01568 Molydopterin dinucleotide binding domain AMRN_RS09775 PF00384 Molybdopterin oxidoreductase AMRN_RS09775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS09785 PF00561 alpha/beta hydrolase fold AMRN_RS09790 PF00593 TonB dependent receptor AMRN_RS09790 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS09810 PF00005 ABC transporter AMRN_RS09815 PF01032 FecCD transport family AMRN_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS09830 PF00005 ABC transporter AMRN_RS09830 PF08402 TOBE domain AMRN_RS09840 PF00005 ABC transporter AMRN_RS09845 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS09850 PF12849 PBP superfamily domain AMRN_RS09855 PF03454 MoeA C-terminal region (domain IV) AMRN_RS09855 PF03453 MoeA N-terminal region (domain I and II) AMRN_RS09855 PF00994 Probable molybdopterin binding domain AMRN_RS09860 PF00266 Aminotransferase class-V AMRN_RS09865 PF03459 TOBE domain AMRN_RS09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMRN_RS09875 PF02634 FdhD/NarQ family AMRN_RS09885 PF13247 4Fe-4S dicluster domain AMRN_RS09910 PF13247 4Fe-4S dicluster domain AMRN_RS09940 PF13247 4Fe-4S dicluster domain AMRN_RS09945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS09945 PF00384 Molybdopterin oxidoreductase AMRN_RS09945 PF01568 Molydopterin dinucleotide binding domain AMRN_RS09960 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS09965 PF00072 Response regulator receiver domain AMRN_RS09965 PF00158 Sigma-54 interaction domain AMRN_RS09980 PF01841 Transglutaminase-like superfamily AMRN_RS09985 PF00586 AIR synthase related protein, N-terminal domain AMRN_RS09985 PF02769 AIR synthase related protein, C-terminal domain AMRN_RS09990 PF03841 L-seryl-tRNA selenium transferase AMRN_RS09995 PF09106 Elongation factor SelB, winged helix AMRN_RS09995 PF00009 Elongation factor Tu GTP binding domain AMRN_RS09995 PF09107 Elongation factor SelB, winged helix AMRN_RS09995 PF09105 Elongation factor SelB, winged helix AMRN_RS09995 PF03144 Elongation factor Tu domain 2 AMRN_RS10005 PF13638 PIN domain AMRN_RS10005 PF02562 PhoH-like protein AMRN_RS10020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMRN_RS10025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMRN_RS10030 PF03480 Bacterial extracellular solute-binding protein, family 7 AMRN_RS10035 PF03150 Di-haem cytochrome c peroxidase AMRN_RS10035 PF00034 Cytochrome c AMRN_RS10040 PF02203 Tar ligand binding domain homologue AMRN_RS10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS10040 PF00672 HAMP domain AMRN_RS10045 PF00925 GTP cyclohydrolase II AMRN_RS10055 PF00271 Helicase conserved C-terminal domain AMRN_RS10055 PF00270 DEAD/DEAH box helicase AMRN_RS10055 PF03880 DbpA RNA binding domain AMRN_RS10060 PF00672 HAMP domain AMRN_RS10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS10060 PF02203 Tar ligand binding domain homologue AMRN_RS10105 PF01048 Phosphorylase superfamily AMRN_RS10110 PF00698 Acyl transferase domain AMRN_RS10115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMRN_RS10130 PF04052 TolB amino-terminal domain AMRN_RS10140 PF02472 Biopolymer transport protein ExbD/TolR AMRN_RS10145 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS10150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMRN_RS10155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMRN_RS10155 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMRN_RS10160 PF00231 ATP synthase AMRN_RS10165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMRN_RS10165 PF00306 ATP synthase alpha/beta chain, C terminal domain AMRN_RS10165 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMRN_RS10170 PF00213 ATP synthase delta (OSCP) subunit AMRN_RS10175 PF00430 ATP synthase B/B' CF(0) AMRN_RS10185 PF02195 ParB-like nuclease domain AMRN_RS10185 PF17762 HTH domain found in ParB protein AMRN_RS10190 PF13614 AAA domain AMRN_RS10195 PF03099 Biotin/lipoate A/B protein ligase family AMRN_RS10195 PF08279 HTH domain AMRN_RS10195 PF02237 Biotin protein ligase C terminal domain AMRN_RS10205 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10210 PF00551 Formyl transferase AMRN_RS10210 PF02911 Formyl transferase, C-terminal domain AMRN_RS10215 PF00696 Amino acid kinase family AMRN_RS10220 PF01018 GTP1/OBG AMRN_RS10220 PF01926 50S ribosome-binding GTPase AMRN_RS10225 PF01016 Ribosomal L27 protein AMRN_RS10230 PF00829 Ribosomal prokaryotic L21 protein AMRN_RS10235 PF01042 Endoribonuclease L-PSP AMRN_RS10240 PF01807 CHC2 zinc finger AMRN_RS10240 PF16730 DnaG-primase C-terminal, helicase-binding domain AMRN_RS10240 PF13662 Toprim domain AMRN_RS10240 PF08275 DNA primase catalytic core, N-terminal domain AMRN_RS10250 PF00075 RNase H AMRN_RS10255 PF14622 Ribonuclease-III-like AMRN_RS10255 PF00035 Double-stranded RNA binding motif AMRN_RS10260 PF01264 Chorismate synthase AMRN_RS10270 PF02001 Protein of unknown function DUF134 AMRN_RS10275 PF01435 Peptidase family M48 AMRN_RS10285 PF00300 Histidine phosphatase superfamily (branch 1) AMRN_RS10290 PF01926 50S ribosome-binding GTPase AMRN_RS10290 PF12631 MnmE helical domain AMRN_RS10290 PF10396 GTP-binding protein TrmE N-terminus AMRN_RS10300 PF02096 60Kd inner membrane protein AMRN_RS10300 PF14849 YidC periplasmic domain AMRN_RS10305 PF01809 Putative membrane protein insertion efficiency factor AMRN_RS10310 PF00825 Ribonuclease P AMRN_RS10315 PF00468 Ribosomal protein L34 AMRN_RS10320 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10320 PF02743 Cache domain AMRN_RS10325 PF07724 AAA domain (Cdc48 subfamily) AMRN_RS10325 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS10325 PF10431 C-terminal, D2-small domain, of ClpB protein AMRN_RS10325 PF17871 AAA lid domain AMRN_RS10325 PF02861 Clp amino terminal domain, pathogenicity island component AMRN_RS10330 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS10330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10340 PF01351 Ribonuclease HII AMRN_RS10350 PF00563 EAL domain AMRN_RS10350 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS10350 PF08448 PAS fold AMRN_RS10360 PF01641 SelR domain AMRN_RS10360 PF01625 Peptide methionine sulfoxide reductase AMRN_RS10365 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMRN_RS10375 PF00202 Aminotransferase class-III AMRN_RS10390 PF02447 GntP family permease AMRN_RS10400 PF00085 Thioredoxin AMRN_RS10405 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMRN_RS10405 PF00578 AhpC/TSA family AMRN_RS10410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMRN_RS10410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMRN_RS10410 PF00205 Thiamine pyrophosphate enzyme, central domain AMRN_RS10420 PF01145 SPFH domain / Band 7 family AMRN_RS10435 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS10445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMRN_RS10455 PF12724 Flavodoxin domain AMRN_RS10475 PF01808 AICARFT/IMPCHase bienzyme AMRN_RS10475 PF02142 MGS-like domain AMRN_RS10480 PF02769 AIR synthase related protein, C-terminal domain AMRN_RS10480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMRN_RS10480 PF00586 AIR synthase related protein, N-terminal domain AMRN_RS10490 PF01551 Peptidase family M23 AMRN_RS10490 PF10145 Phage-related minor tail protein AMRN_RS10490 PF01464 Transglycosylase SLT domain AMRN_RS10495 PF01769 Divalent cation transporter AMRN_RS10495 PF00571 CBS domain AMRN_RS10495 PF03448 MgtE intracellular N domain AMRN_RS10505 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS10510 PF01227 GTP cyclohydrolase I AMRN_RS10520 PF00437 Type II/IV secretion system protein AMRN_RS10535 PF03441 FAD binding domain of DNA photolyase AMRN_RS10535 PF00875 DNA photolyase AMRN_RS10550 PF00474 Sodium:solute symporter family AMRN_RS10555 PF08543 Phosphomethylpyrimidine kinase AMRN_RS10560 PF00072 Response regulator receiver domain AMRN_RS10560 PF04397 LytTr DNA-binding domain AMRN_RS10565 PF06580 Histidine kinase AMRN_RS10565 PF07694 5TMR of 5TMR-LYT AMRN_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10570 PF01593 Flavin containing amine oxidoreductase AMRN_RS10575 PF00762 Ferrochelatase AMRN_RS10585 PF01926 50S ribosome-binding GTPase AMRN_RS10585 PF07650 KH domain AMRN_RS10590 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMRN_RS10590 PF01078 Magnesium chelatase, subunit ChlI AMRN_RS10600 PF00665 Integrase core domain AMRN_RS10620 PF12462 DNA helicase IV / RNA helicase N terminal AMRN_RS10620 PF13361 UvrD-like helicase C-terminal domain AMRN_RS10620 PF00580 UvrD/REP helicase N-terminal domain AMRN_RS10640 PF04231 Endonuclease I AMRN_RS10650 PF00589 Phage integrase family AMRN_RS10650 PF02899 Phage integrase, N-terminal SAM-like domain AMRN_RS10660 PF13651 Adenine-specific methyltransferase EcoRI AMRN_RS10670 PF13426 PAS domain AMRN_RS10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS10670 PF08447 PAS fold AMRN_RS10675 PF02203 Tar ligand binding domain homologue AMRN_RS10675 PF00672 HAMP domain AMRN_RS10675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS10685 PF01327 Polypeptide deformylase AMRN_RS10690 PF00574 Clp protease AMRN_RS10695 PF05697 Bacterial trigger factor protein (TF) AMRN_RS10695 PF05698 Bacterial trigger factor protein (TF) C-terminus AMRN_RS10695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMRN_RS10715 PF03976 Polyphosphate kinase 2 (PPK2) AMRN_RS10720 PF03976 Polyphosphate kinase 2 (PPK2) AMRN_RS10725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMRN_RS10730 PF00301 Rubredoxin AMRN_RS10735 PF16653 Saccharopine dehydrogenase C-terminal domain AMRN_RS10735 PF03435 Saccharopine dehydrogenase NADP binding domain AMRN_RS10765 PF04055 Radical SAM superfamily AMRN_RS10765 PF06969 HemN C-terminal domain AMRN_RS10775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS10775 PF02203 Tar ligand binding domain homologue AMRN_RS10775 PF00672 HAMP domain AMRN_RS10785 PF00924 Mechanosensitive ion channel AMRN_RS10790 PF00027 Cyclic nucleotide-binding domain AMRN_RS10790 PF13545 Crp-like helix-turn-helix domain AMRN_RS10810 PF00005 ABC transporter AMRN_RS10815 PF13237 4Fe-4S dicluster domain AMRN_RS10815 PF12801 4Fe-4S binding domain AMRN_RS10830 PF12800 4Fe-4S binding domain AMRN_RS10830 PF12838 4Fe-4S dicluster domain AMRN_RS10845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMRN_RS10845 PF18793 Nitrous oxide reductase propeller repeat 2 AMRN_RS10845 PF18764 Nitrous oxide reductase propeller repeat AMRN_RS10860 PF01654 Cytochrome bd terminal oxidase subunit I AMRN_RS10870 PF02001 Protein of unknown function DUF134 AMRN_RS10875 PF13344 Haloacid dehalogenase-like hydrolase AMRN_RS10875 PF00293 NUDIX domain AMRN_RS10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10880 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS10900 PF00005 ABC transporter AMRN_RS10910 PF00593 TonB dependent receptor AMRN_RS10910 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS10935 PF00258 Flavodoxin AMRN_RS10940 PF00384 Molybdopterin oxidoreductase AMRN_RS10940 PF01568 Molydopterin dinucleotide binding domain AMRN_RS10940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS10950 PF13247 4Fe-4S dicluster domain AMRN_RS10955 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS10960 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS10960 PF00072 Response regulator receiver domain AMRN_RS10965 PF00258 Flavodoxin AMRN_RS10970 PF00258 Flavodoxin AMRN_RS10975 PF01475 Ferric uptake regulator family AMRN_RS11015 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS11015 PF17158 Membrane-associated sensor, integral membrane domain AMRN_RS11025 PF07664 Ferrous iron transport protein B C terminus AMRN_RS11025 PF02421 Ferrous iron transport protein B AMRN_RS11025 PF07670 Nucleoside recognition AMRN_RS11030 PF01475 Ferric uptake regulator family AMRN_RS11050 PF04377 Arginine-tRNA-protein transferase, C terminus AMRN_RS11050 PF04376 Arginine-tRNA-protein transferase, N terminus AMRN_RS11055 PF00290 Tryptophan synthase alpha chain AMRN_RS11060 PF02548 Ketopantoate hydroxymethyltransferase AMRN_RS11065 PF05491 RuvB C-terminal winged helix domain AMRN_RS11065 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMRN_RS11065 PF17864 RuvB AAA lid domain AMRN_RS11070 PF01594 AI-2E family transporter AMRN_RS11075 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS11075 PF00072 Response regulator receiver domain AMRN_RS11085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMRN_RS11090 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS11090 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS11090 PF07196 Flagellin hook IN motif AMRN_RS11090 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS11090 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS11090 PF07196 Flagellin hook IN motif AMRN_RS11100 PF17871 AAA lid domain AMRN_RS11100 PF10431 C-terminal, D2-small domain, of ClpB protein AMRN_RS11100 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS11100 PF02861 Clp amino terminal domain, pathogenicity island component AMRN_RS11100 PF07724 AAA domain (Cdc48 subfamily) AMRN_RS11105 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMRN_RS11115 PF08447 PAS fold AMRN_RS11115 PF08448 PAS fold AMRN_RS11115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS11125 PF00384 Molybdopterin oxidoreductase AMRN_RS11125 PF01568 Molydopterin dinucleotide binding domain AMRN_RS11125 PF14710 Respiratory nitrate reductase alpha N-terminal AMRN_RS11140 PF00771 FHIPEP family AMRN_RS11150 PF18269 T3SS EscN ATPase C-terminal domain AMRN_RS11150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMRN_RS11160 PF01312 FlhB HrpN YscU SpaS Family AMRN_RS11175 PF00460 Flagella basal body rod protein AMRN_RS11175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMRN_RS11180 PF02049 Flagellar hook-basal body complex protein FliE AMRN_RS11190 PF10609 NUBPL iron-transfer P-loop NTPase AMRN_RS11195 PF00448 SRP54-type protein, GTPase domain AMRN_RS11220 PF01618 MotA/TolQ/ExbB proton channel family AMRN_RS11225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMRN_RS11245 PF07559 Flagellar basal body protein FlaE AMRN_RS11245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMRN_RS11245 PF00460 Flagella basal body rod protein AMRN_RS11245 PF07196 Flagellin hook IN motif AMRN_RS11250 PF07559 Flagellar basal body protein FlaE AMRN_RS11250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMRN_RS11250 PF00460 Flagella basal body rod protein AMRN_RS11260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMRN_RS11270 PF14841 FliG middle domain AMRN_RS11270 PF01706 FliG C-terminal domain AMRN_RS11270 PF14842 FliG N-terminal domain AMRN_RS11275 PF01514 Secretory protein of YscJ/FliF family AMRN_RS11275 PF08345 Flagellar M-ring protein C-terminal AMRN_RS11280 PF00460 Flagella basal body rod protein AMRN_RS11285 PF00460 Flagella basal body rod protein AMRN_RS11285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMRN_RS11295 PF00072 Response regulator receiver domain AMRN_RS11300 PF00460 Flagella basal body rod protein AMRN_RS11300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMRN_RS11315 PF01782 RimM N-terminal domain AMRN_RS11325 PF00886 Ribosomal protein S16 AMRN_RS11330 PF00448 SRP54-type protein, GTPase domain AMRN_RS11330 PF02978 Signal peptide binding domain AMRN_RS11330 PF02881 SRP54-type protein, helical bundle domain AMRN_RS11335 PF01479 S4 domain AMRN_RS11335 PF00849 RNA pseudouridylate synthase AMRN_RS11340 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMRN_RS11350 PF01784 NIF3 (NGG1p interacting factor 3) AMRN_RS11355 PF02091 Glycyl-tRNA synthetase alpha subunit AMRN_RS11360 PF00731 AIR carboxylase AMRN_RS11370 PF01136 Peptidase family U32 AMRN_RS11375 PF00672 HAMP domain AMRN_RS11375 PF17200 Single Cache domain 2 AMRN_RS11375 PF00672 HAMP domain AMRN_RS11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS11375 PF17200 Single Cache domain 2 AMRN_RS11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS11385 PF13476 AAA domain AMRN_RS11390 PF01513 ATP-NAD kinase AMRN_RS11395 PF03764 Elongation factor G, domain IV AMRN_RS11395 PF00679 Elongation factor G C-terminus AMRN_RS11395 PF14492 Elongation Factor G, domain II AMRN_RS11395 PF00009 Elongation factor Tu GTP binding domain AMRN_RS11395 PF03144 Elongation factor Tu domain 2 AMRN_RS11400 PF00177 Ribosomal protein S7p/S5e AMRN_RS11405 PF00164 Ribosomal protein S12/S23 AMRN_RS11410 PF07690 Major Facilitator Superfamily AMRN_RS11430 PF00664 ABC transporter transmembrane region AMRN_RS11430 PF00005 ABC transporter AMRN_RS11435 PF08021 Siderophore-interacting FAD-binding domain AMRN_RS11435 PF00005 ABC transporter AMRN_RS11435 PF00664 ABC transporter transmembrane region AMRN_RS11435 PF04954 Siderophore-interacting protein AMRN_RS11445 PF00593 TonB dependent receptor AMRN_RS11445 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS11455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMRN_RS11460 PF09962 Uncharacterized conserved protein (DUF2196) AMRN_RS11485 PF00005 ABC transporter AMRN_RS11500 PF01891 Cobalt uptake substrate-specific transmembrane region AMRN_RS11510 PF08447 PAS fold AMRN_RS11510 PF08448 PAS fold AMRN_RS11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS11515 PF00072 Response regulator receiver domain AMRN_RS11515 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS11525 PF01568 Molydopterin dinucleotide binding domain AMRN_RS11525 PF18364 Molybdopterin oxidoreductase N-terminal domain AMRN_RS11525 PF00384 Molybdopterin oxidoreductase AMRN_RS11530 PF03458 UPF0126 domain AMRN_RS11550 PF05000 RNA polymerase Rpb1, domain 4 AMRN_RS11550 PF04997 RNA polymerase Rpb1, domain 1 AMRN_RS11550 PF04983 RNA polymerase Rpb1, domain 3 AMRN_RS11550 PF00623 RNA polymerase Rpb1, domain 2 AMRN_RS11550 PF04998 RNA polymerase Rpb1, domain 5 AMRN_RS11555 PF04565 RNA polymerase Rpb2, domain 3 AMRN_RS11555 PF04563 RNA polymerase beta subunit AMRN_RS11555 PF00562 RNA polymerase Rpb2, domain 6 AMRN_RS11555 PF04560 RNA polymerase Rpb2, domain 7 AMRN_RS11555 PF10385 RNA polymerase beta subunit external 1 domain AMRN_RS11555 PF04561 RNA polymerase Rpb2, domain 2 AMRN_RS11560 PF00542 Ribosomal protein L7/L12 C-terminal domain AMRN_RS11560 PF16320 Ribosomal protein L7/L12 dimerisation domain AMRN_RS11565 PF00466 Ribosomal protein L10 AMRN_RS11570 PF00687 Ribosomal protein L1p/L10e family AMRN_RS11575 PF00298 Ribosomal protein L11, RNA binding domain AMRN_RS11575 PF03946 Ribosomal protein L11, N-terminal domain AMRN_RS11580 PF02357 Transcription termination factor nusG AMRN_RS11595 PF00471 Ribosomal protein L33 AMRN_RS11600 PF03144 Elongation factor Tu domain 2 AMRN_RS11600 PF03143 Elongation factor Tu C-terminal domain AMRN_RS11600 PF00009 Elongation factor Tu GTP binding domain AMRN_RS11625 PF08245 Mur ligase middle domain AMRN_RS11630 PF00953 Glycosyl transferase family 4 AMRN_RS11630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMRN_RS11635 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMRN_RS11635 PF01676 Metalloenzyme superfamily AMRN_RS11640 PF00158 Sigma-54 interaction domain AMRN_RS11640 PF00072 Response regulator receiver domain AMRN_RS11640 PF02954 Bacterial regulatory protein, Fis family AMRN_RS11645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMRN_RS11645 PF00005 ABC transporter AMRN_RS11650 PF00905 Penicillin binding protein transpeptidase domain AMRN_RS11650 PF00912 Transglycosylase AMRN_RS11655 PF00120 Glutamine synthetase, catalytic domain AMRN_RS11655 PF03951 Glutamine synthetase, beta-Grasp domain AMRN_RS11660 PF02811 PHP domain AMRN_RS11665 PF00072 Response regulator receiver domain AMRN_RS11665 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS11670 PF02391 MoaE protein AMRN_RS11680 PF02621 Menaquinone biosynthesis AMRN_RS11685 PF02673 Bacitracin resistance protein BacA AMRN_RS11690 PF03033 Glycosyltransferase family 28 N-terminal domain AMRN_RS11690 PF04101 Glycosyltransferase family 28 C-terminal domain AMRN_RS11695 PF01098 Cell cycle protein AMRN_RS11700 PF03717 Penicillin-binding Protein dimerisation domain AMRN_RS11700 PF00905 Penicillin binding protein transpeptidase domain AMRN_RS11705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMRN_RS11750 PF00117 Glutamine amidotransferase class-I AMRN_RS11760 PF13416 Bacterial extracellular solute-binding protein AMRN_RS11770 PF08402 TOBE domain AMRN_RS11770 PF00005 ABC transporter AMRN_RS11775 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMRN_RS11780 PF00155 Aminotransferase class I and II AMRN_RS11785 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMRN_RS11790 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMRN_RS11795 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMRN_RS11795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMRN_RS11805 PF10531 SLBB domain AMRN_RS11805 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMRN_RS11805 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMRN_RS11810 PF00285 Citrate synthase, C-terminal domain AMRN_RS11815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMRN_RS11815 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMRN_RS11815 PF00384 Molybdopterin oxidoreductase AMRN_RS11820 PF00146 NADH dehydrogenase AMRN_RS11825 PF12838 4Fe-4S dicluster domain AMRN_RS11830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMRN_RS11835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMRN_RS11840 PF00361 Proton-conducting membrane transporter AMRN_RS11840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMRN_RS11845 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMRN_RS11845 PF00361 Proton-conducting membrane transporter AMRN_RS11850 PF00361 Proton-conducting membrane transporter AMRN_RS11855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMRN_RS11860 PF00890 FAD binding domain AMRN_RS11860 PF02910 Fumarate reductase flavoprotein C-term AMRN_RS11865 PF13085 2Fe-2S iron-sulfur cluster binding domain AMRN_RS11865 PF13183 4Fe-4S dicluster domain AMRN_RS11870 PF00350 Dynamin family AMRN_RS11875 PF00350 Dynamin family AMRN_RS11885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS11885 PF00384 Molybdopterin oxidoreductase AMRN_RS11885 PF01568 Molydopterin dinucleotide binding domain AMRN_RS11890 PF13247 4Fe-4S dicluster domain AMRN_RS11895 PF03916 Polysulphide reductase, NrfD AMRN_RS11900 PF12833 Helix-turn-helix domain AMRN_RS11905 PF02595 Glycerate kinase family AMRN_RS11920 PF00654 Voltage gated chloride channel AMRN_RS11925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMRN_RS11925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMRN_RS11930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMRN_RS11930 PF00205 Thiamine pyrophosphate enzyme, central domain AMRN_RS11930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMRN_RS11935 PF00171 Aldehyde dehydrogenase family AMRN_RS11945 PF08442 ATP-grasp domain AMRN_RS11945 PF00549 CoA-ligase AMRN_RS11950 PF00549 CoA-ligase AMRN_RS11950 PF02629 CoA binding domain AMRN_RS11955 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AMRN_RS11970 PF01914 MarC family integral membrane protein AMRN_RS11975 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS11980 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMRN_RS11985 PF00005 ABC transporter AMRN_RS11995 PF13649 Methyltransferase domain AMRN_RS12000 PF01758 Sodium Bile acid symporter family AMRN_RS12005 PF00857 Isochorismatase family AMRN_RS12025 PF00186 Dihydrofolate reductase AMRN_RS12030 PF00303 Thymidylate synthase AMRN_RS12035 PF00271 Helicase conserved C-terminal domain AMRN_RS12035 PF00570 HRDC domain AMRN_RS12035 PF00270 DEAD/DEAH box helicase AMRN_RS12035 PF09382 RQC domain AMRN_RS12035 PF16124 RecQ zinc-binding AMRN_RS12055 PF01810 LysE type translocator AMRN_RS12070 PF00285 Citrate synthase, C-terminal domain AMRN_RS12075 PF00694 Aconitase C-terminal domain AMRN_RS12075 PF00330 Aconitase family (aconitate hydratase) AMRN_RS12080 PF04303 PrpF protein AMRN_RS12090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMRN_RS12090 PF03900 Porphobilinogen deaminase, C-terminal domain AMRN_RS12100 PF12170 DNA polymerase III tau subunit V interacting with alpha AMRN_RS12100 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMRN_RS12100 PF12169 DNA polymerase III subunits gamma and tau domain III AMRN_RS12105 PF01177 Asp/Glu/Hydantoin racemase AMRN_RS12115 PF07568 Histidine kinase AMRN_RS12115 PF12282 Signal transduction histidine kinase AMRN_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12120 PF00072 Response regulator receiver domain AMRN_RS12125 PF07715 TonB-dependent Receptor Plug Domain AMRN_RS12130 PF00756 Putative esterase AMRN_RS12130 PF11806 Domain of unknown function (DUF3327) AMRN_RS12135 PF07497 Rho termination factor, RNA-binding domain AMRN_RS12135 PF07498 Rho termination factor, N-terminal domain AMRN_RS12135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMRN_RS12140 PF00578 AhpC/TSA family AMRN_RS12140 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMRN_RS12145 PF00037 4Fe-4S binding domain AMRN_RS12150 PF00334 Nucleoside diphosphate kinase AMRN_RS12160 PF01783 Ribosomal L32p protein family AMRN_RS12165 PF02504 Fatty acid synthesis protein AMRN_RS12170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMRN_RS12170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMRN_RS12180 PF05437 Branched-chain amino acid transport protein (AzlD) AMRN_RS12185 PF03591 AzlC protein AMRN_RS12215 PF00425 chorismate binding enzyme AMRN_RS12225 PF00202 Aminotransferase class-III AMRN_RS12240 PF04011 LemA family AMRN_RS12260 PF08448 PAS fold AMRN_RS12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12260 PF08447 PAS fold AMRN_RS12265 PF01810 LysE type translocator AMRN_RS12285 PF00391 PEP-utilising enzyme, mobile domain AMRN_RS12285 PF00224 Pyruvate kinase, barrel domain AMRN_RS12285 PF02887 Pyruvate kinase, alpha/beta domain AMRN_RS12300 PF00171 Aldehyde dehydrogenase family AMRN_RS12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12310 PF00072 Response regulator receiver domain AMRN_RS12310 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12320 PF02021 Uncharacterised protein family UPF0102 AMRN_RS12325 PF02203 Tar ligand binding domain homologue AMRN_RS12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS12325 PF00672 HAMP domain AMRN_RS12330 PF00155 Aminotransferase class I and II AMRN_RS12340 PF00484 Carbonic anhydrase AMRN_RS12350 PF04055 Radical SAM superfamily AMRN_RS12360 PF04028 Domain of unknown function (DUF374) AMRN_RS12365 PF01938 TRAM domain AMRN_RS12365 PF04055 Radical SAM superfamily AMRN_RS12365 PF00919 Uncharacterized protein family UPF0004 AMRN_RS12375 PF08529 NusA N-terminal domain AMRN_RS12375 PF13184 NusA-like KH domain AMRN_RS12380 PF09190 DALR domain AMRN_RS12380 PF01406 tRNA synthetases class I (C) catalytic domain AMRN_RS12385 PF01084 Ribosomal protein S18 AMRN_RS12390 PF00436 Single-strand binding protein family AMRN_RS12395 PF01250 Ribosomal protein S6 AMRN_RS12400 PF06144 DNA polymerase III, delta subunit AMRN_RS12405 PF02623 FliW protein AMRN_RS12410 PF00773 RNB domain AMRN_RS12420 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS12420 PF00989 PAS fold AMRN_RS12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMRN_RS12425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMRN_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12450 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12450 PF00072 Response regulator receiver domain AMRN_RS12455 PF03916 Polysulphide reductase, NrfD AMRN_RS12460 PF13247 4Fe-4S dicluster domain AMRN_RS12465 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMRN_RS12465 PF01568 Molydopterin dinucleotide binding domain AMRN_RS12465 PF00384 Molybdopterin oxidoreductase AMRN_RS12465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS12470 PF02875 Mur ligase family, glutamate ligase domain AMRN_RS12470 PF01225 Mur ligase family, catalytic domain AMRN_RS12470 PF08245 Mur ligase middle domain AMRN_RS12480 PF00155 Aminotransferase class I and II AMRN_RS12490 PF01702 Queuine tRNA-ribosyltransferase AMRN_RS12495 PF02686 Glu-tRNAGln amidotransferase C subunit AMRN_RS12500 PF03960 ArsC family AMRN_RS12505 PF01474 Class-II DAHP synthetase family AMRN_RS12510 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMRN_RS12520 PF02574 Homocysteine S-methyltransferase AMRN_RS12520 PF02219 Methylenetetrahydrofolate reductase AMRN_RS12525 PF03652 Holliday junction resolvase AMRN_RS12530 PF11849 Domain of unknown function (DUF3369) AMRN_RS12535 PF01648 4'-phosphopantetheinyl transferase superfamily AMRN_RS12540 PF00528 Binding-protein-dependent transport system inner membrane component AMRN_RS12545 PF02569 Pantoate-beta-alanine ligase AMRN_RS12550 PF00072 Response regulator receiver domain AMRN_RS12560 PF04055 Radical SAM superfamily AMRN_RS12560 PF18693 TRAM domain AMRN_RS12560 PF00919 Uncharacterized protein family UPF0004 AMRN_RS12565 PF01171 PP-loop family AMRN_RS12575 PF02561 Flagellar protein FliS AMRN_RS12580 PF02465 Flagellar hook-associated protein 2 N-terminus AMRN_RS12580 PF07195 Flagellar hook-associated protein 2 C-terminus AMRN_RS12580 PF07196 Flagellin hook IN motif AMRN_RS12590 PF02107 Flagellar L-ring protein AMRN_RS12615 PF01313 Bacterial export proteins, family 3 AMRN_RS12625 PF02119 Flagellar P-ring protein AMRN_RS12630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMRN_RS12630 PF02154 Flagellar motor switch protein FliM AMRN_RS12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12635 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS12640 PF03606 C4-dicarboxylate anaerobic carrier AMRN_RS12645 PF07687 Peptidase dimerisation domain AMRN_RS12645 PF01546 Peptidase family M20/M25/M40 AMRN_RS12650 PF03606 C4-dicarboxylate anaerobic carrier AMRN_RS12655 PF07687 Peptidase dimerisation domain AMRN_RS12655 PF01546 Peptidase family M20/M25/M40 AMRN_RS12660 PF01979 Amidohydrolase family AMRN_RS12665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMRN_RS12665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMRN_RS12670 PF00543 Nitrogen regulatory protein P-II AMRN_RS12675 PF00909 Ammonium Transporter Family AMRN_RS12680 PF00543 Nitrogen regulatory protein P-II AMRN_RS12685 PF00909 Ammonium Transporter Family AMRN_RS12700 PF08335 GlnD PII-uridylyltransferase AMRN_RS12700 PF01909 Nucleotidyltransferase domain AMRN_RS12700 PF01966 HD domain AMRN_RS12705 PF00501 AMP-binding enzyme AMRN_RS12705 PF01553 Acyltransferase AMRN_RS12705 PF13193 AMP-binding enzyme C-terminal domain AMRN_RS12710 PF01022 Bacterial regulatory protein, arsR family AMRN_RS12715 PF02040 Arsenical pump membrane protein AMRN_RS12720 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMRN_RS12735 PF01544 CorA-like Mg2+ transporter protein AMRN_RS12740 PF01740 STAS domain AMRN_RS12740 PF00916 Sulfate permease family AMRN_RS12750 PF00892 EamA-like transporter family AMRN_RS12760 PF01595 Cyclin M transmembrane N-terminal domain AMRN_RS12760 PF00571 CBS domain AMRN_RS12765 PF04172 LrgB-like family AMRN_RS12770 PF03788 LrgA family AMRN_RS12775 PF08348 YheO-like PAS domain AMRN_RS12775 PF13309 HTH domain AMRN_RS12780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS12780 PF00672 HAMP domain AMRN_RS12780 PF02203 Tar ligand binding domain homologue AMRN_RS12785 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12785 PF00072 Response regulator receiver domain AMRN_RS12790 PF00989 PAS fold AMRN_RS12790 PF00672 HAMP domain AMRN_RS12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12790 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS12795 PF17763 Glutaminase/Asparaginase C-terminal domain AMRN_RS12795 PF00710 Asparaginase, N-terminal AMRN_RS12800 PF03605 Anaerobic c4-dicarboxylate membrane transporter AMRN_RS12805 PF00206 Lyase AMRN_RS12805 PF10415 Fumarase C C-terminus AMRN_RS12810 PF13085 2Fe-2S iron-sulfur cluster binding domain AMRN_RS12810 PF13183 4Fe-4S dicluster domain AMRN_RS12815 PF00890 FAD binding domain AMRN_RS12815 PF02910 Fumarate reductase flavoprotein C-term AMRN_RS12820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMRN_RS12825 PF02779 Transketolase, pyrimidine binding domain AMRN_RS12825 PF02780 Transketolase, C-terminal domain AMRN_RS12825 PF00456 Transketolase, thiamine diphosphate binding domain AMRN_RS12835 PF08447 PAS fold AMRN_RS12835 PF08448 PAS fold AMRN_RS12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12855 PF03412 Peptidase C39 family AMRN_RS12855 PF00664 ABC transporter transmembrane region AMRN_RS12855 PF00005 ABC transporter AMRN_RS12865 PF00072 Response regulator receiver domain AMRN_RS12865 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12870 PF01594 AI-2E family transporter AMRN_RS12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12875 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS12875 PF00989 PAS fold AMRN_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12880 PF08448 PAS fold AMRN_RS12880 PF08447 PAS fold AMRN_RS12885 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMRN_RS12895 PF00072 Response regulator receiver domain AMRN_RS12895 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12900 PF01568 Molydopterin dinucleotide binding domain AMRN_RS12900 PF18364 Molybdopterin oxidoreductase N-terminal domain AMRN_RS12900 PF00384 Molybdopterin oxidoreductase AMRN_RS12930 PF00920 Dehydratase family AMRN_RS12935 PF13180 PDZ domain AMRN_RS12935 PF17820 PDZ domain AMRN_RS12940 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12940 PF00072 Response regulator receiver domain AMRN_RS12950 PF03605 Anaerobic c4-dicarboxylate membrane transporter AMRN_RS12955 PF08448 PAS fold AMRN_RS12955 PF08447 PAS fold AMRN_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS12960 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS12960 PF00072 Response regulator receiver domain AMRN_RS12970 PF03186 CobD/Cbib protein AMRN_RS12975 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMRN_RS12975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMRN_RS12980 PF02580 D-Tyr-tRNA(Tyr) deacylase AMRN_RS12995 PF00155 Aminotransferase class I and II AMRN_RS13000 PF02654 Cobalamin-5-phosphate synthase AMRN_RS13010 PF01914 MarC family integral membrane protein AMRN_RS13015 PF02277 Phosphoribosyltransferase AMRN_RS13020 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS13020 PF00072 Response regulator receiver domain AMRN_RS13025 PF13426 PAS domain AMRN_RS13025 PF08447 PAS fold AMRN_RS13025 PF00989 PAS fold AMRN_RS13025 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS13025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS13025 PF13493 Domain of unknown function (DUF4118) AMRN_RS13040 PF00085 Thioredoxin AMRN_RS13040 PF11412 Disulphide bond corrector protein DsbC AMRN_RS13040 PF02683 Cytochrome C biogenesis protein transmembrane region AMRN_RS13045 PF00085 Thioredoxin AMRN_RS13065 PF02666 Phosphatidylserine decarboxylase AMRN_RS13075 PF07670 Nucleoside recognition AMRN_RS13080 PF06725 3D domain AMRN_RS13080 PF03562 MltA specific insert domain AMRN_RS13090 PF00012 Hsp70 protein AMRN_RS13095 PF01025 GrpE AMRN_RS13120 PF16868 NMT1-like family AMRN_RS13135 PF00072 Response regulator receiver domain AMRN_RS13135 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS13140 PF08447 PAS fold AMRN_RS13140 PF08448 PAS fold AMRN_RS13145 PF01416 tRNA pseudouridine synthase AMRN_RS13155 PF06750 Bacterial Peptidase A24 N-terminal domain AMRN_RS13155 PF01478 Type IV leader peptidase family AMRN_RS13160 PF01255 Putative undecaprenyl diphosphate synthase AMRN_RS13165 PF04127 DNA / pantothenate metabolism flavoprotein AMRN_RS13165 PF02441 Flavoprotein AMRN_RS13170 PF14602 Hexapeptide repeat of succinyl-transferase AMRN_RS13170 PF12804 MobA-like NTP transferase domain AMRN_RS13180 PF00271 Helicase conserved C-terminal domain AMRN_RS13180 PF08148 DSHCT (NUC185) domain AMRN_RS13180 PF00270 DEAD/DEAH box helicase AMRN_RS13185 PF05958 tRNA (Uracil-5-)-methyltransferase AMRN_RS13190 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13190 PF07196 Flagellin hook IN motif AMRN_RS13190 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13200 PF07196 Flagellin hook IN motif AMRN_RS13200 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13200 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13205 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13205 PF07196 Flagellin hook IN motif AMRN_RS13205 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13210 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13210 PF07196 Flagellin hook IN motif AMRN_RS13210 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13215 PF07196 Flagellin hook IN motif AMRN_RS13215 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13215 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13220 PF00669 Bacterial flagellin N-terminal helical region AMRN_RS13220 PF07196 Flagellin hook IN motif AMRN_RS13220 PF00700 Bacterial flagellin C-terminal helical region AMRN_RS13240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS13250 PF02348 Cytidylyltransferase AMRN_RS13255 PF01209 ubiE/COQ5 methyltransferase family AMRN_RS13260 PF03102 NeuB family AMRN_RS13260 PF08666 SAF domain AMRN_RS13265 PF08241 Methyltransferase domain AMRN_RS13285 PF02348 Cytidylyltransferase AMRN_RS13290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMRN_RS13300 PF02348 Cytidylyltransferase AMRN_RS13305 PF13302 Acetyltransferase (GNAT) domain AMRN_RS13310 PF08666 SAF domain AMRN_RS13310 PF03102 NeuB family AMRN_RS13320 PF02719 Polysaccharide biosynthesis protein AMRN_RS13325 PF00154 recA bacterial DNA recombination protein AMRN_RS13330 PF00113 Enolase, C-terminal TIM barrel domain AMRN_RS13330 PF03952 Enolase, N-terminal domain AMRN_RS13345 PF00999 Sodium/hydrogen exchanger family AMRN_RS13345 PF02080 TrkA-C domain AMRN_RS13345 PF02254 TrkA-N domain AMRN_RS13350 PF06968 Biotin and Thiamin Synthesis associated domain AMRN_RS13350 PF04055 Radical SAM superfamily AMRN_RS13360 PF13368 Topoisomerase C-terminal repeat AMRN_RS13360 PF01751 Toprim domain AMRN_RS13360 PF01131 DNA topoisomerase AMRN_RS13365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMRN_RS13370 PF02621 Menaquinone biosynthesis AMRN_RS13380 PF00361 Proton-conducting membrane transporter AMRN_RS13385 PF00361 Proton-conducting membrane transporter AMRN_RS13385 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMRN_RS13390 PF00361 Proton-conducting membrane transporter AMRN_RS13390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMRN_RS13395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMRN_RS13400 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMRN_RS13405 PF12838 4Fe-4S dicluster domain AMRN_RS13410 PF00146 NADH dehydrogenase AMRN_RS13415 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMRN_RS13415 PF01568 Molydopterin dinucleotide binding domain AMRN_RS13415 PF00384 Molybdopterin oxidoreductase AMRN_RS13415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMRN_RS13415 PF12838 4Fe-4S dicluster domain AMRN_RS13430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMRN_RS13435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMRN_RS13440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMRN_RS13445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMRN_RS13450 PF06480 FtsH Extracellular AMRN_RS13450 PF01434 Peptidase family M41 AMRN_RS13450 PF17862 AAA+ lid domain AMRN_RS13450 PF00004 ATPase family associated with various cellular activities (AAA) AMRN_RS13470 PF00005 ABC transporter AMRN_RS13470 PF16326 ABC transporter C-terminal domain AMRN_RS13470 PF12848 ABC transporter AMRN_RS13480 PF01261 Xylose isomerase-like TIM barrel AMRN_RS13485 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMRN_RS13490 PF00990 Diguanylate cyclase, GGDEF domain AMRN_RS13490 PF10442 FIST C domain AMRN_RS13490 PF08495 FIST N domain AMRN_RS13490 PF00563 EAL domain AMRN_RS13510 PF02677 Epoxyqueuosine reductase QueH AMRN_RS13515 PF02684 Lipid-A-disaccharide synthetase AMRN_RS13520 PF07977 FabA-like domain AMRN_RS13525 PF00132 Bacterial transferase hexapeptide (six repeats) AMRN_RS13525 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMRN_RS13530 PF10431 C-terminal, D2-small domain, of ClpB protein AMRN_RS13530 PF06689 ClpX C4-type zinc finger AMRN_RS13530 PF07724 AAA domain (Cdc48 subfamily) AMRN_RS13545 PF00732 GMC oxidoreductase AMRN_RS13545 PF05199 GMC oxidoreductase AMRN_RS13555 PF00677 Lumazine binding domain AMRN_RS13560 PF02203 Tar ligand binding domain homologue AMRN_RS13560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS13560 PF00672 HAMP domain AMRN_RS13565 PF13932 GidA associated domain AMRN_RS13565 PF01134 Glucose inhibited division protein A AMRN_RS13570 PF02028 BCCT, betaine/carnitine/choline family transporter AMRN_RS13575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMRN_RS13575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMRN_RS13575 PF02770 Acyl-CoA dehydrogenase, middle domain AMRN_RS13580 PF02515 CoA-transferase family III AMRN_RS13585 PF00501 AMP-binding enzyme AMRN_RS13585 PF13193 AMP-binding enzyme C-terminal domain AMRN_RS13590 PF01575 MaoC like domain AMRN_RS13600 PF02261 Aspartate decarboxylase AMRN_RS13615 PF07859 alpha/beta hydrolase fold AMRN_RS13620 PF00925 GTP cyclohydrolase II AMRN_RS13625 PF01575 MaoC like domain AMRN_RS13630 PF01012 Electron transfer flavoprotein domain AMRN_RS13635 PF01012 Electron transfer flavoprotein domain AMRN_RS13635 PF00766 Electron transfer flavoprotein FAD-binding domain AMRN_RS13640 PF01494 FAD binding domain AMRN_RS13655 PF05971 RNA methyltransferase AMRN_RS13660 PF02203 Tar ligand binding domain homologue AMRN_RS13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS13660 PF00672 HAMP domain AMRN_RS13665 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMRN_RS13665 PF12801 4Fe-4S binding domain AMRN_RS13665 PF13746 4Fe-4S dicluster domain AMRN_RS13670 PF06418 CTP synthase N-terminus AMRN_RS13670 PF00117 Glutamine amidotransferase class-I AMRN_RS13675 PF01368 DHH family AMRN_RS13675 PF02272 DHHA1 domain AMRN_RS13675 PF17768 RecJ OB domain AMRN_RS13690 PF01965 DJ-1/PfpI family AMRN_RS13705 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMRN_RS13705 PF02811 PHP domain AMRN_RS13705 PF14579 Helix-hairpin-helix motif AMRN_RS13705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMRN_RS13710 PF01975 Survival protein SurE AMRN_RS13735 PF01967 MoaC family AMRN_RS13740 PF01165 Ribosomal protein S21 AMRN_RS13745 PF00939 Sodium:sulfate symporter transmembrane region AMRN_RS13750 PF01594 AI-2E family transporter AMRN_RS13785 PF01027 Inhibitor of apoptosis-promoting Bax1 AMRN_RS13790 PF17792 ThiD2 family AMRN_RS13790 PF02581 Thiamine monophosphate synthase AMRN_RS13800 PF03840 Preprotein translocase SecG subunit AMRN_RS13810 PF01765 Ribosome recycling factor AMRN_RS13815 PF00156 Phosphoribosyl transferase domain AMRN_RS13825 PF12832 MFS_1 like family AMRN_RS13830 PF03883 Peroxide stress protein YaaA AMRN_RS13835 PF02810 SEC-C motif AMRN_RS13850 PF03167 Uracil DNA glycosylase superfamily AMRN_RS13855 PF04011 LemA family AMRN_RS13870 PF13419 Haloacid dehalogenase-like hydrolase AMRN_RS13880 PF07690 Major Facilitator Superfamily AMRN_RS13895 PF03441 FAD binding domain of DNA photolyase AMRN_RS13895 PF00875 DNA photolyase AMRN_RS13900 PF00875 DNA photolyase AMRN_RS13900 PF03441 FAD binding domain of DNA photolyase AMRN_RS13915 PF01053 Cys/Met metabolism PLP-dependent enzyme AMRN_RS13920 PF02082 Transcriptional regulator AMRN_RS13925 PF00291 Pyridoxal-phosphate dependent enzyme AMRN_RS13935 PF01507 Phosphoadenosine phosphosulfate reductase family AMRN_RS13940 PF01507 Phosphoadenosine phosphosulfate reductase family AMRN_RS13945 PF00009 Elongation factor Tu GTP binding domain AMRN_RS13950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMRN_RS13950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMRN_RS13955 PF02347 Glycine cleavage system P-protein AMRN_RS13960 PF00672 HAMP domain AMRN_RS13960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMRN_RS13960 PF02203 Tar ligand binding domain homologue AMRN_RS13965 PF00149 Calcineurin-like phosphoesterase AMRN_RS13975 PF00011 Hsp20/alpha crystallin family AMRN_RS13980 PF00009 Elongation factor Tu GTP binding domain AMRN_RS13980 PF03144 Elongation factor Tu domain 2 AMRN_RS13980 PF00679 Elongation factor G C-terminus AMRN_RS13990 PF00005 ABC transporter AMRN_RS13990 PF02687 FtsX-like permease family AMRN_RS13990 PF12704 MacB-like periplasmic core domain AMRN_RS14015 PF00149 Calcineurin-like phosphoesterase AMRN_RS14020 PF00072 Response regulator receiver domain AMRN_RS14020 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS14025 PF00512 His Kinase A (phospho-acceptor) domain AMRN_RS14025 PF00672 HAMP domain AMRN_RS14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMRN_RS14030 PF11849 Domain of unknown function (DUF3369) AMRN_RS14035 PF04143 Sulphur transport AMRN_RS14040 PF01206 Sulfurtransferase TusA AMRN_RS14045 PF04960 Glutaminase AMRN_RS14075 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS14075 PF00072 Response regulator receiver domain AMRN_RS14085 PF03458 UPF0126 domain AMRN_RS14090 PF00072 Response regulator receiver domain AMRN_RS14090 PF00486 Transcriptional regulatory protein, C terminal AMRN_RS14095 PF00551 Formyl transferase AMRN_RS14100 PF02075 Crossover junction endodeoxyribonuclease RuvC