locus-tag class description AMYT_RS00005 PF11638 DnaA N-terminal domain AMYT_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMYT_RS00005 PF00308 Bacterial dnaA protein AMYT_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMYT_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMYT_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMYT_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus AMYT_RS00015 PF01751 Toprim domain AMYT_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00015 PF00204 DNA gyrase B AMYT_RS00035 PF01810 LysE type translocator AMYT_RS00045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMYT_RS00060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS00065 PF14489 QueF-like protein AMYT_RS00075 PF01047 MarR family AMYT_RS00080 PF04264 YceI-like domain AMYT_RS00090 PF17954 Quercetinase C-terminal cupin domain AMYT_RS00090 PF02678 Pirin AMYT_RS00110 PF08448 PAS fold AMYT_RS00110 PF08447 PAS fold AMYT_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00115 PF00849 RNA pseudouridylate synthase AMYT_RS00120 PF10397 Adenylosuccinate lyase C-terminus AMYT_RS00120 PF00206 Lyase AMYT_RS00125 PF00317 Ribonucleotide reductase, all-alpha domain AMYT_RS00125 PF02867 Ribonucleotide reductase, barrel domain AMYT_RS00125 PF03477 ATP cone domain AMYT_RS00130 PF00268 Ribonucleotide reductase, small chain AMYT_RS00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS00145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMYT_RS00160 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMYT_RS00170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMYT_RS00170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMYT_RS00170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMYT_RS00170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMYT_RS00175 PF01810 LysE type translocator AMYT_RS00180 PF03150 Di-haem cytochrome c peroxidase AMYT_RS00180 PF00034 Cytochrome c AMYT_RS00185 PF02702 Osmosensitive K+ channel His kinase sensor domain AMYT_RS00185 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00185 PF13493 Domain of unknown function (DUF4118) AMYT_RS00190 PF00072 Response regulator receiver domain AMYT_RS00190 PF12833 Helix-turn-helix domain AMYT_RS00195 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00195 PF00672 HAMP domain AMYT_RS00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMYT_RS00200 PF12833 Helix-turn-helix domain AMYT_RS00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMYT_RS00200 PF02805 Metal binding domain of Ada AMYT_RS00205 PF00464 Serine hydroxymethyltransferase AMYT_RS00210 PF13746 4Fe-4S dicluster domain AMYT_RS00210 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMYT_RS00210 PF12801 4Fe-4S binding domain AMYT_RS00215 PF00171 Aldehyde dehydrogenase family AMYT_RS00220 PF00085 Thioredoxin AMYT_RS00225 PF01638 HxlR-like helix-turn-helix AMYT_RS00230 PF00107 Zinc-binding dehydrogenase AMYT_RS00230 PF08240 Alcohol dehydrogenase GroES-like domain AMYT_RS00235 PF01638 HxlR-like helix-turn-helix AMYT_RS00240 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMYT_RS00245 PF04055 Radical SAM superfamily AMYT_RS00260 PF00977 Histidine biosynthesis protein AMYT_RS00265 PF00398 Ribosomal RNA adenine dimethylase AMYT_RS00270 PF17770 Ribonuclease J C-terminal domain AMYT_RS00270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMYT_RS00270 PF00753 Metallo-beta-lactamase superfamily AMYT_RS00275 PF01380 SIS domain AMYT_RS00275 PF00571 CBS domain AMYT_RS00280 PF00849 RNA pseudouridylate synthase AMYT_RS00280 PF01479 S4 domain AMYT_RS00285 PF12002 MgsA AAA+ ATPase C terminal AMYT_RS00285 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMYT_RS00285 PF16193 AAA C-terminal domain AMYT_RS00285 PF01661 Macro domain AMYT_RS00290 PF03653 Uncharacterised protein family (UPF0093) AMYT_RS00295 PF02562 PhoH-like protein AMYT_RS00295 PF13638 PIN domain AMYT_RS00300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMYT_RS00300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMYT_RS00310 PF02910 Fumarate reductase flavoprotein C-term AMYT_RS00310 PF00890 FAD binding domain AMYT_RS00315 PF13085 2Fe-2S iron-sulfur cluster binding domain AMYT_RS00315 PF13183 4Fe-4S dicluster domain AMYT_RS00320 PF03480 Bacterial extracellular solute-binding protein, family 7 AMYT_RS00325 PF00881 Nitroreductase family AMYT_RS00335 PF13537 Glutamine amidotransferase domain AMYT_RS00335 PF00733 Asparagine synthase AMYT_RS00345 PF00072 Response regulator receiver domain AMYT_RS00345 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00350 PF01384 Phosphate transporter family AMYT_RS00360 PF00271 Helicase conserved C-terminal domain AMYT_RS00360 PF00270 DEAD/DEAH box helicase AMYT_RS00365 PF02785 Biotin carboxylase C-terminal domain AMYT_RS00365 PF00289 Biotin carboxylase, N-terminal domain AMYT_RS00365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMYT_RS00370 PF00364 Biotin-requiring enzyme AMYT_RS00375 PF14437 MafB19-like deaminase AMYT_RS00385 PF02754 Cysteine-rich domain AMYT_RS00390 PF02589 LUD domain AMYT_RS00390 PF13183 4Fe-4S dicluster domain AMYT_RS00390 PF11870 Domain of unknown function (DUF3390) AMYT_RS00395 PF02589 LUD domain AMYT_RS00400 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00400 PF00989 PAS fold AMYT_RS00405 PF00072 Response regulator receiver domain AMYT_RS00405 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00410 PF03480 Bacterial extracellular solute-binding protein, family 7 AMYT_RS00420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMYT_RS00435 PF02637 GatB domain AMYT_RS00435 PF02934 GatB/GatE catalytic domain AMYT_RS00440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMYT_RS00440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMYT_RS00445 PF03649 Uncharacterised protein family (UPF0014) AMYT_RS00460 PF00873 AcrB/AcrD/AcrF family AMYT_RS00465 PF00529 HlyD membrane-fusion protein of T1SS AMYT_RS00465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMYT_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00485 PF00072 Response regulator receiver domain AMYT_RS00485 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00495 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00495 PF00072 Response regulator receiver domain AMYT_RS00505 PF04264 YceI-like domain AMYT_RS00515 PF01554 MatE AMYT_RS00520 PF00742 Homoserine dehydrogenase AMYT_RS00520 PF03447 Homoserine dehydrogenase, NAD binding domain AMYT_RS00520 PF01842 ACT domain AMYT_RS00525 PF00155 Aminotransferase class I and II AMYT_RS00535 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMYT_RS00535 PF00588 SpoU rRNA Methylase family AMYT_RS00540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS00545 PF01197 Ribosomal protein L31 AMYT_RS00565 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS00565 PF17156 Gammaproteobacterial periplasmic sensor domain AMYT_RS00575 PF00589 Phage integrase family AMYT_RS00575 PF02899 Phage integrase, N-terminal SAM-like domain AMYT_RS00615 PF01555 DNA methylase AMYT_RS00635 PF03372 Endonuclease/Exonuclease/phosphatase family AMYT_RS00650 PF00571 CBS domain AMYT_RS00650 PF01769 Divalent cation transporter AMYT_RS00650 PF03448 MgtE intracellular N domain AMYT_RS00655 PF01590 GAF domain AMYT_RS00655 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS00655 PF00563 EAL domain AMYT_RS00655 PF00360 Phytochrome region AMYT_RS00660 PF03831 PhnA domain AMYT_RS00660 PF08274 PhnA Zinc-Ribbon AMYT_RS00665 PF08447 PAS fold AMYT_RS00665 PF08448 PAS fold AMYT_RS00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS00700 PF00578 AhpC/TSA family AMYT_RS00700 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMYT_RS00710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00710 PF08447 PAS fold AMYT_RS00710 PF08448 PAS fold AMYT_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00725 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00730 PF02222 ATP-grasp domain AMYT_RS00735 PF01678 Diaminopimelate epimerase AMYT_RS00740 PF01121 Dephospho-CoA kinase AMYT_RS00745 PF17284 Spermidine synthase tetramerisation domain AMYT_RS00750 PF02769 AIR synthase related protein, C-terminal domain AMYT_RS00750 PF00586 AIR synthase related protein, N-terminal domain AMYT_RS00755 PF01810 LysE type translocator AMYT_RS00765 PF00266 Aminotransferase class-V AMYT_RS00770 PF13393 Histidyl-tRNA synthetase AMYT_RS00775 PF00709 Adenylosuccinate synthetase AMYT_RS00785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMYT_RS00785 PF00117 Glutamine amidotransferase class-I AMYT_RS00800 PF02542 YgbB family AMYT_RS00800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMYT_RS00810 PF01964 Radical SAM ThiC family AMYT_RS00815 PF01883 Iron-sulfur cluster assembly protein AMYT_RS00815 PF10609 NUBPL iron-transfer P-loop NTPase AMYT_RS00825 PF01502 Phosphoribosyl-AMP cyclohydrolase AMYT_RS00825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMYT_RS00840 PF01063 Amino-transferase class IV AMYT_RS00850 PF02607 B12 binding domain AMYT_RS00850 PF02574 Homocysteine S-methyltransferase AMYT_RS00850 PF00809 Pterin binding enzyme AMYT_RS00850 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMYT_RS00850 PF02310 B12 binding domain AMYT_RS00885 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMYT_RS00885 PF01266 FAD dependent oxidoreductase AMYT_RS00890 PF02664 S-Ribosylhomocysteinase (LuxS) AMYT_RS00895 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00895 PF00672 HAMP domain AMYT_RS00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00895 PF18698 Histidine kinase sensor domain AMYT_RS00900 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00900 PF01627 Hpt domain AMYT_RS00900 PF00072 Response regulator receiver domain AMYT_RS00905 PF01970 Tripartite tricarboxylate transporter TctA family AMYT_RS00920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMYT_RS00925 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMYT_RS00925 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMYT_RS00935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMYT_RS00940 PF13419 Haloacid dehalogenase-like hydrolase AMYT_RS00945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMYT_RS00950 PF00380 Ribosomal protein S9/S16 AMYT_RS00955 PF00572 Ribosomal protein L13 AMYT_RS00960 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS00960 PF16736 Single Cache-like AMYT_RS00960 PF00989 PAS fold AMYT_RS00965 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS00965 PF00072 Response regulator receiver domain AMYT_RS00980 PF00005 ABC transporter AMYT_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS00995 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS00995 PF00563 EAL domain AMYT_RS00995 PF01590 GAF domain AMYT_RS00995 PF00989 PAS fold AMYT_RS01005 PF03462 PCRF domain AMYT_RS01005 PF00472 RF-1 domain AMYT_RS01010 PF01649 Ribosomal protein S20 AMYT_RS01015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMYT_RS01015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMYT_RS01015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMYT_RS01015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMYT_RS01020 PF01252 Signal peptidase (SPase) II AMYT_RS01025 PF00330 Aconitase family (aconitate hydratase) AMYT_RS01030 PF12804 MobA-like NTP transferase domain AMYT_RS01035 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS01060 PF00453 Ribosomal protein L20 AMYT_RS01065 PF01632 Ribosomal protein L35 AMYT_RS01070 PF00707 Translation initiation factor IF-3, C-terminal domain AMYT_RS01070 PF05198 Translation initiation factor IF-3, N-terminal domain AMYT_RS01075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMYT_RS01075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMYT_RS01075 PF03129 Anticodon binding domain AMYT_RS01115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMYT_RS01115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMYT_RS01140 PF00109 Beta-ketoacyl synthase, N-terminal domain AMYT_RS01140 PF02801 Beta-ketoacyl synthase, C-terminal domain AMYT_RS01155 PF00005 ABC transporter AMYT_RS01160 PF00975 Thioesterase domain AMYT_RS01160 PF00550 Phosphopantetheine attachment site AMYT_RS01160 PF00501 AMP-binding enzyme AMYT_RS01160 PF13193 AMP-binding enzyme C-terminal domain AMYT_RS01160 PF00668 Condensation domain AMYT_RS01185 PF00221 Aromatic amino acid lyase AMYT_RS01205 PF00890 FAD binding domain AMYT_RS01210 PF00550 Phosphopantetheine attachment site AMYT_RS01215 PF02801 Beta-ketoacyl synthase, C-terminal domain AMYT_RS01215 PF00109 Beta-ketoacyl synthase, N-terminal domain AMYT_RS01245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMYT_RS01245 PF13288 DXP reductoisomerase C-terminal domain AMYT_RS01245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMYT_RS01265 PF00814 Glycoprotease family AMYT_RS01275 PF01235 Sodium:alanine symporter family AMYT_RS01280 PF03853 YjeF-related protein N-terminus AMYT_RS01280 PF01256 Carbohydrate kinase AMYT_RS01290 PF05690 Thiazole biosynthesis protein ThiG AMYT_RS01305 PF12833 Helix-turn-helix domain AMYT_RS01365 PF00072 Response regulator receiver domain AMYT_RS01370 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS01375 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMYT_RS01380 PF01142 tRNA pseudouridine synthase D (TruD) AMYT_RS01395 PF00005 ABC transporter AMYT_RS01400 PF02405 Permease MlaE AMYT_RS01405 PF15437 Plasminogen-binding protein pgbA C-terminal AMYT_RS01415 PF03572 Peptidase family S41 AMYT_RS01415 PF13180 PDZ domain AMYT_RS01420 PF01259 SAICAR synthetase AMYT_RS01425 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMYT_RS01440 PF01553 Acyltransferase AMYT_RS01445 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMYT_RS01455 PF02416 mttA/Hcf106 family AMYT_RS01460 PF05746 DALR anticodon binding domain AMYT_RS01460 PF00750 tRNA synthetases class I (R) AMYT_RS01460 PF03485 Arginyl tRNA synthetase N terminal domain AMYT_RS01470 PF01467 Cytidylyltransferase-like AMYT_RS01475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMYT_RS01475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMYT_RS01480 PF00162 Phosphoglycerate kinase AMYT_RS01485 PF00121 Triosephosphate isomerase AMYT_RS01495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMYT_RS01495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMYT_RS01500 PF13344 Haloacid dehalogenase-like hydrolase AMYT_RS01505 PF00800 Prephenate dehydratase AMYT_RS01505 PF01842 ACT domain AMYT_RS01505 PF01817 Chorismate mutase type II AMYT_RS01510 PF00155 Aminotransferase class I and II AMYT_RS01515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMYT_RS01515 PF02779 Transketolase, pyrimidine binding domain AMYT_RS01515 PF02780 Transketolase, C-terminal domain AMYT_RS01525 PF02545 Maf-like protein AMYT_RS01550 PF00877 NlpC/P60 family AMYT_RS01560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMYT_RS01560 PF01411 tRNA synthetases class II (A) AMYT_RS01560 PF02272 DHHA1 domain AMYT_RS01565 PF00085 Thioredoxin AMYT_RS01570 PF00989 PAS fold AMYT_RS01570 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS01570 PF08447 PAS fold AMYT_RS01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS01575 PF00072 Response regulator receiver domain AMYT_RS01575 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS01580 PF01235 Sodium:alanine symporter family AMYT_RS01585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS01590 PF01113 Dihydrodipicolinate reductase, N-terminus AMYT_RS01590 PF05173 Dihydrodipicolinate reductase, C-terminus AMYT_RS01595 PF00156 Phosphoribosyl transferase domain AMYT_RS01595 PF13537 Glutamine amidotransferase domain AMYT_RS01600 PF16199 Radical_SAM C-terminal domain AMYT_RS01600 PF04055 Radical SAM superfamily AMYT_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS01605 PF03466 LysR substrate binding domain AMYT_RS01610 PF13361 UvrD-like helicase C-terminal domain AMYT_RS01610 PF00580 UvrD/REP helicase N-terminal domain AMYT_RS01615 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMYT_RS01620 PF00288 GHMP kinases N terminal domain AMYT_RS01625 PF01668 SmpB protein AMYT_RS01630 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMYT_RS01670 PF05538 Campylobacter major outer membrane protein AMYT_RS01675 PF00472 RF-1 domain AMYT_RS01675 PF03462 PCRF domain AMYT_RS01685 PF05538 Campylobacter major outer membrane protein AMYT_RS01695 PF02660 Glycerol-3-phosphate acyltransferase AMYT_RS01700 PF02445 Quinolinate synthetase A protein AMYT_RS01705 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMYT_RS01705 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMYT_RS01710 PF02272 DHHA1 domain AMYT_RS01710 PF01368 DHH family AMYT_RS01720 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMYT_RS01730 PF00288 GHMP kinases N terminal domain AMYT_RS01730 PF08544 GHMP kinases C terminal AMYT_RS01740 PF11987 Translation-initiation factor 2 AMYT_RS01740 PF00009 Elongation factor Tu GTP binding domain AMYT_RS01740 PF04760 Translation initiation factor IF-2, N-terminal region AMYT_RS01745 PF02033 Ribosome-binding factor A AMYT_RS01750 PF02576 RimP N-terminal domain AMYT_RS01755 PF01872 RibD C-terminal domain AMYT_RS01755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMYT_RS01760 PF09285 Elongation factor P, C-terminal AMYT_RS01760 PF08207 Elongation factor P (EF-P) KOW-like domain AMYT_RS01760 PF01132 Elongation factor P (EF-P) OB domain AMYT_RS01765 PF01842 ACT domain AMYT_RS01765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMYT_RS01765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMYT_RS01770 PF00575 S1 RNA binding domain AMYT_RS01775 PF02401 LytB protein AMYT_RS01780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMYT_RS01785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMYT_RS01785 PF01588 Putative tRNA binding domain AMYT_RS01785 PF03147 Ferredoxin-fold anticodon binding domain AMYT_RS01785 PF03484 tRNA synthetase B5 domain AMYT_RS01790 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMYT_RS01790 PF01409 tRNA synthetases class II core domain (F) AMYT_RS01795 PF01230 HIT domain AMYT_RS01800 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMYT_RS01805 PF00109 Beta-ketoacyl synthase, N-terminal domain AMYT_RS01805 PF02801 Beta-ketoacyl synthase, C-terminal domain AMYT_RS01810 PF00550 Phosphopantetheine attachment site AMYT_RS01835 PF06508 Queuosine biosynthesis protein QueC AMYT_RS01840 PF03454 MoeA C-terminal region (domain IV) AMYT_RS01840 PF00994 Probable molybdopterin binding domain AMYT_RS01840 PF03453 MoeA N-terminal region (domain I and II) AMYT_RS01850 PF04452 RNA methyltransferase AMYT_RS01865 PF00033 Cytochrome b/b6/petB AMYT_RS01865 PF00032 Cytochrome b(C-terminal)/b6/petD AMYT_RS01875 PF00291 Pyridoxal-phosphate dependent enzyme AMYT_RS01880 PF00696 Amino acid kinase family AMYT_RS01885 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS01885 PF17158 Membrane-associated sensor, integral membrane domain AMYT_RS01890 PF13361 UvrD-like helicase C-terminal domain AMYT_RS01890 PF00580 UvrD/REP helicase N-terminal domain AMYT_RS01905 PF00119 ATP synthase A chain AMYT_RS01910 PF13291 ACT domain AMYT_RS01910 PF00291 Pyridoxal-phosphate dependent enzyme AMYT_RS01915 PF01746 tRNA (Guanine-1)-methyltransferase AMYT_RS01920 PF01245 Ribosomal protein L19 AMYT_RS01935 PF12848 ABC transporter AMYT_RS01935 PF00005 ABC transporter AMYT_RS01935 PF16326 ABC transporter C-terminal domain AMYT_RS01955 PF00106 short chain dehydrogenase AMYT_RS01970 PF03707 Bacterial signalling protein N terminal repeat AMYT_RS01970 PF13188 PAS domain AMYT_RS01970 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS01970 PF00563 EAL domain AMYT_RS01980 PF03309 Type III pantothenate kinase AMYT_RS01985 PF01634 ATP phosphoribosyltransferase AMYT_RS01990 PF08241 Methyltransferase domain AMYT_RS02010 PF00579 tRNA synthetases class I (W and Y) AMYT_RS02025 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMYT_RS02035 PF02659 Putative manganese efflux pump AMYT_RS02040 PF07690 Major Facilitator Superfamily AMYT_RS02045 PF07690 Major Facilitator Superfamily AMYT_RS02050 PF00005 ABC transporter AMYT_RS02050 PF00664 ABC transporter transmembrane region AMYT_RS02055 PF00005 ABC transporter AMYT_RS02055 PF04954 Siderophore-interacting protein AMYT_RS02055 PF00664 ABC transporter transmembrane region AMYT_RS02055 PF08021 Siderophore-interacting FAD-binding domain AMYT_RS02060 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS02060 PF00593 TonB dependent receptor AMYT_RS02080 PF02472 Biopolymer transport protein ExbD/TolR AMYT_RS02085 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS02090 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS02115 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS02115 PF00593 TonB dependent receptor AMYT_RS02120 PF12833 Helix-turn-helix domain AMYT_RS02120 PF02311 AraC-like ligand binding domain AMYT_RS02130 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS02130 PF00593 TonB dependent receptor AMYT_RS02135 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS02135 PF00593 TonB dependent receptor AMYT_RS02140 PF12833 Helix-turn-helix domain AMYT_RS02140 PF00072 Response regulator receiver domain AMYT_RS02145 PF00989 PAS fold AMYT_RS02145 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMYT_RS02150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMYT_RS02155 PF12833 Helix-turn-helix domain AMYT_RS02175 PF02403 Seryl-tRNA synthetase N-terminal domain AMYT_RS02175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMYT_RS02180 PF01578 Cytochrome C assembly protein AMYT_RS02180 PF05140 ResB-like family AMYT_RS02185 PF02335 Cytochrome c552 AMYT_RS02190 PF03264 NapC/NirT cytochrome c family, N-terminal region AMYT_RS02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS02200 PF08447 PAS fold AMYT_RS02220 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AMYT_RS02225 PF00037 4Fe-4S binding domain AMYT_RS02225 PF12801 4Fe-4S binding domain AMYT_RS02230 PF12800 4Fe-4S binding domain AMYT_RS02230 PF12838 4Fe-4S dicluster domain AMYT_RS02235 PF00384 Molybdopterin oxidoreductase AMYT_RS02235 PF01568 Molydopterin dinucleotide binding domain AMYT_RS02235 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMYT_RS02235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS02245 PF17805 AsnC-like ligand binding domain AMYT_RS02265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS02265 PF14824 Sirohaem biosynthesis protein central AMYT_RS02265 PF10414 Sirohaem synthase dimerisation region AMYT_RS02275 PF04055 Radical SAM superfamily AMYT_RS02275 PF13186 Iron-sulfur cluster-binding domain AMYT_RS02290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMYT_RS02295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMYT_RS02300 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMYT_RS02305 PF00034 Cytochrome c AMYT_RS02325 PF00591 Glycosyl transferase family, a/b domain AMYT_RS02325 PF02885 Glycosyl transferase family, helical bundle domain AMYT_RS02335 PF06463 Molybdenum Cofactor Synthesis C AMYT_RS02335 PF04055 Radical SAM superfamily AMYT_RS02345 PF00312 Ribosomal protein S15 AMYT_RS02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02365 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS02365 PF00989 PAS fold AMYT_RS02370 PF13380 CoA binding domain AMYT_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02375 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS02375 PF08521 Two-component sensor kinase N-terminal AMYT_RS02380 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS02380 PF00072 Response regulator receiver domain AMYT_RS02385 PF00639 PPIC-type PPIASE domain AMYT_RS02390 PF01116 Fructose-bisphosphate aldolase class-II AMYT_RS02395 PF02472 Biopolymer transport protein ExbD/TolR AMYT_RS02400 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS02410 PF13426 PAS domain AMYT_RS02410 PF00072 Response regulator receiver domain AMYT_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02415 PF01202 Shikimate kinase AMYT_RS02420 PF00815 Histidinol dehydrogenase AMYT_RS02430 PF00348 Polyprenyl synthetase AMYT_RS02435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMYT_RS02435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMYT_RS02435 PF01488 Shikimate / quinate 5-dehydrogenase AMYT_RS02440 PF03129 Anticodon binding domain AMYT_RS02440 PF04073 Aminoacyl-tRNA editing domain AMYT_RS02440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMYT_RS02445 PF00924 Mechanosensitive ion channel AMYT_RS02445 PF05552 Conserved TM helix AMYT_RS02450 PF01743 Poly A polymerase head domain AMYT_RS02450 PF12627 Probable RNA and SrmB- binding site of polymerase A AMYT_RS02450 PF01966 HD domain AMYT_RS02460 PF02699 Preprotein translocase subunit AMYT_RS02465 PF02355 Protein export membrane protein AMYT_RS02470 PF02355 Protein export membrane protein AMYT_RS02470 PF07549 SecD/SecF GG Motif AMYT_RS02490 PF13603 Leucyl-tRNA synthetase, Domain 2 AMYT_RS02490 PF09334 tRNA synthetases class I (M) AMYT_RS02490 PF00133 tRNA synthetases class I (I, L, M and V) AMYT_RS02500 PF08245 Mur ligase middle domain AMYT_RS02505 PF04225 Opacity-associated protein A LysM-like domain AMYT_RS02505 PF01551 Peptidase family M23 AMYT_RS02520 PF02254 TrkA-N domain AMYT_RS02520 PF00999 Sodium/hydrogen exchanger family AMYT_RS02525 PF00593 TonB dependent receptor AMYT_RS02525 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS02555 PF02559 CarD-like/TRCF domain AMYT_RS02555 PF00270 DEAD/DEAH box helicase AMYT_RS02555 PF00271 Helicase conserved C-terminal domain AMYT_RS02555 PF17757 UvrB interaction domain AMYT_RS02555 PF03461 TRCF domain AMYT_RS02560 PF00221 Aromatic amino acid lyase AMYT_RS02575 PF04205 FMN-binding domain AMYT_RS02575 PF00890 FAD binding domain AMYT_RS02580 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS02580 PF00989 PAS fold AMYT_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02585 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS02585 PF00072 Response regulator receiver domain AMYT_RS02600 PF01699 Sodium/calcium exchanger protein AMYT_RS02615 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS02615 PF00072 Response regulator receiver domain AMYT_RS02630 PF12729 Four helix bundle sensory module for signal transduction AMYT_RS02630 PF00672 HAMP domain AMYT_RS02630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS02635 PF00072 Response regulator receiver domain AMYT_RS02635 PF02954 Bacterial regulatory protein, Fis family AMYT_RS02635 PF00158 Sigma-54 interaction domain AMYT_RS02640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS02640 PF08447 PAS fold AMYT_RS02645 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02645 PF00672 HAMP domain AMYT_RS02650 PF02028 BCCT, betaine/carnitine/choline family transporter AMYT_RS02655 PF13277 YmdB-like protein AMYT_RS02675 PF01209 ubiE/COQ5 methyltransferase family AMYT_RS02680 PF13742 OB-fold nucleic acid binding domain AMYT_RS02680 PF02601 Exonuclease VII, large subunit AMYT_RS02685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS02685 PF00672 HAMP domain AMYT_RS02685 PF02203 Tar ligand binding domain homologue AMYT_RS02690 PF08447 PAS fold AMYT_RS02690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS02695 PF01584 CheW-like domain AMYT_RS02700 PF00072 Response regulator receiver domain AMYT_RS02705 PF01339 CheB methylesterase AMYT_RS02705 PF00072 Response regulator receiver domain AMYT_RS02710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMYT_RS02720 PF02261 Aspartate decarboxylase AMYT_RS02725 PF02575 YbaB/EbfC DNA-binding family AMYT_RS02730 PF00348 Polyprenyl synthetase AMYT_RS02735 PF00166 Chaperonin 10 Kd subunit AMYT_RS02740 PF00118 TCP-1/cpn60 chaperonin family AMYT_RS02745 PF03062 MBOAT, membrane-bound O-acyltransferase family AMYT_RS02765 PF11849 Domain of unknown function (DUF3369) AMYT_RS02770 PF00459 Inositol monophosphatase family AMYT_RS02775 PF01380 SIS domain AMYT_RS02780 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMYT_RS02780 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMYT_RS02780 PF02772 S-adenosylmethionine synthetase, central domain AMYT_RS02785 PF17848 Acetyl-coA carboxylase zinc finger domain AMYT_RS02785 PF01039 Carboxyl transferase domain AMYT_RS02790 PF02581 Thiamine monophosphate synthase AMYT_RS02795 PF02590 Predicted SPOUT methyltransferase AMYT_RS02810 PF01207 Dihydrouridine synthase (Dus) AMYT_RS02820 PF01434 Peptidase family M41 AMYT_RS02820 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS02820 PF17862 AAA+ lid domain AMYT_RS02840 PF08447 PAS fold AMYT_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02840 PF08448 PAS fold AMYT_RS02845 PF11849 Domain of unknown function (DUF3369) AMYT_RS02850 PF00072 Response regulator receiver domain AMYT_RS02850 PF08769 Sporulation initiation factor Spo0A C terminal AMYT_RS02855 PF08447 PAS fold AMYT_RS02855 PF08448 PAS fold AMYT_RS02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS02860 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS02860 PF17158 Membrane-associated sensor, integral membrane domain AMYT_RS02865 PF00682 HMGL-like AMYT_RS02865 PF08502 LeuA allosteric (dimerisation) domain AMYT_RS02870 PF07556 Protein of unknown function (DUF1538) AMYT_RS02885 PF05192 MutS domain III AMYT_RS02885 PF05188 MutS domain II AMYT_RS02885 PF00488 MutS domain V AMYT_RS02885 PF01624 MutS domain I AMYT_RS02885 PF05190 MutS family domain IV AMYT_RS02890 PF00977 Histidine biosynthesis protein AMYT_RS02895 PF08338 Domain of unknown function (DUF1731) AMYT_RS02895 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS02900 PF00117 Glutamine amidotransferase class-I AMYT_RS02910 PF16861 Carbamoyltransferase C-terminus AMYT_RS02910 PF02543 Carbamoyltransferase N-terminus AMYT_RS02920 PF00009 Elongation factor Tu GTP binding domain AMYT_RS02920 PF03144 Elongation factor Tu domain 2 AMYT_RS02920 PF06421 GTP-binding protein LepA C-terminus AMYT_RS02920 PF00679 Elongation factor G C-terminus AMYT_RS02925 PF00691 OmpA family AMYT_RS02925 PF05736 OprF membrane domain AMYT_RS02930 PF14572 Phosphoribosyl synthetase-associated domain AMYT_RS02930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMYT_RS02945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMYT_RS02950 PF01321 Creatinase/Prolidase N-terminal domain AMYT_RS02950 PF00557 Metallopeptidase family M24 AMYT_RS02955 PF01220 Dehydroquinase class II AMYT_RS02960 PF01979 Amidohydrolase family AMYT_RS02965 PF01343 Peptidase family S49 AMYT_RS02970 PF00871 Acetokinase family AMYT_RS02975 PF01515 Phosphate acetyl/butaryl transferase AMYT_RS02980 PF00871 Acetokinase family AMYT_RS02985 PF00929 Exonuclease AMYT_RS02985 PF02811 PHP domain AMYT_RS02985 PF01336 OB-fold nucleic acid binding domain AMYT_RS02985 PF14579 Helix-hairpin-helix motif AMYT_RS02985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMYT_RS02985 PF11490 DNA polymerase III polC-type N-terminus II AMYT_RS02985 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMYT_RS02990 PF01380 SIS domain AMYT_RS02990 PF00571 CBS domain AMYT_RS02995 PF00474 Sodium:solute symporter family AMYT_RS03005 PF14579 Helix-hairpin-helix motif AMYT_RS03005 PF01336 OB-fold nucleic acid binding domain AMYT_RS03005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMYT_RS03005 PF02811 PHP domain AMYT_RS03005 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMYT_RS03005 PF00929 Exonuclease AMYT_RS03005 PF11490 DNA polymerase III polC-type N-terminus II AMYT_RS03015 PF00474 Sodium:solute symporter family AMYT_RS03025 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS03025 PF00072 Response regulator receiver domain AMYT_RS03030 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS03030 PF00672 HAMP domain AMYT_RS03030 PF13426 PAS domain AMYT_RS03100 PF02464 Competence-damaged protein AMYT_RS03100 PF18146 Damage-inducible protein CinA KH domain AMYT_RS03100 PF00994 Probable molybdopterin binding domain AMYT_RS03105 PF06039 Malate:quinone oxidoreductase (Mqo) AMYT_RS03110 PF00133 tRNA synthetases class I (I, L, M and V) AMYT_RS03110 PF08264 Anticodon-binding domain of tRNA AMYT_RS03125 PF08245 Mur ligase middle domain AMYT_RS03125 PF02875 Mur ligase family, glutamate ligase domain AMYT_RS03140 PF01882 Protein of unknown function DUF58 AMYT_RS03145 PF07726 ATPase family associated with various cellular activities (AAA) AMYT_RS03145 PF17863 AAA lid domain AMYT_RS03150 PF01464 Transglycosylase SLT domain AMYT_RS03150 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMYT_RS03155 PF00318 Ribosomal protein S2 AMYT_RS03160 PF00889 Elongation factor TS AMYT_RS03165 PF00005 ABC transporter AMYT_RS03175 PF00625 Guanylate kinase AMYT_RS03180 PF00563 EAL domain AMYT_RS03180 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS03180 PF08448 PAS fold AMYT_RS03185 PF00403 Heavy-metal-associated domain AMYT_RS03200 PF00005 ABC transporter AMYT_RS03205 PF00762 Ferrochelatase AMYT_RS03215 PF11849 Domain of unknown function (DUF3369) AMYT_RS03220 PF01875 Memo-like protein AMYT_RS03225 PF02698 DUF218 domain AMYT_RS03230 PF00005 ABC transporter AMYT_RS03235 PF00950 ABC 3 transport family AMYT_RS03240 PF17783 CvfB-like winged helix domain AMYT_RS03240 PF13509 S1 domain AMYT_RS03245 PF08534 Redoxin AMYT_RS03255 PF00174 Oxidoreductase molybdopterin binding domain AMYT_RS03260 PF01794 Ferric reductase like transmembrane component AMYT_RS03290 PF07484 Phage Tail Collar Domain AMYT_RS03325 PF13361 UvrD-like helicase C-terminal domain AMYT_RS03325 PF00580 UvrD/REP helicase N-terminal domain AMYT_RS03330 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS03330 PF17151 Periplasmic sensor domain AMYT_RS03335 PF10458 Valyl tRNA synthetase tRNA binding arm AMYT_RS03335 PF00133 tRNA synthetases class I (I, L, M and V) AMYT_RS03335 PF08264 Anticodon-binding domain of tRNA AMYT_RS03350 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS03350 PF00072 Response regulator receiver domain AMYT_RS03360 PF03471 Transporter associated domain AMYT_RS03360 PF00999 Sodium/hydrogen exchanger family AMYT_RS03360 PF02080 TrkA-C domain AMYT_RS03365 PF00873 AcrB/AcrD/AcrF family AMYT_RS03370 PF00989 PAS fold AMYT_RS03370 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS03375 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS03375 PF00072 Response regulator receiver domain AMYT_RS03390 PF07690 Major Facilitator Superfamily AMYT_RS03395 PF01725 Ham1 family AMYT_RS03415 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMYT_RS03415 PF03807 NADP oxidoreductase coenzyme F420-dependent AMYT_RS03420 PF13525 Outer membrane lipoprotein AMYT_RS03425 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMYT_RS03425 PF05362 Lon protease (S16) C-terminal proteolytic domain AMYT_RS03425 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS03440 PF11799 impB/mucB/samB family C-terminal domain AMYT_RS03440 PF00817 impB/mucB/samB family AMYT_RS03440 PF11798 IMS family HHH motif AMYT_RS03455 PF08447 PAS fold AMYT_RS03455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS03460 PF00672 HAMP domain AMYT_RS03460 PF02203 Tar ligand binding domain homologue AMYT_RS03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS03475 PF01168 Alanine racemase, N-terminal domain AMYT_RS03475 PF00842 Alanine racemase, C-terminal domain AMYT_RS03480 PF01235 Sodium:alanine symporter family AMYT_RS03485 PF01266 FAD dependent oxidoreductase AMYT_RS03490 PF01042 Endoribonuclease L-PSP AMYT_RS03500 PF16363 GDP-mannose 4,6 dehydratase AMYT_RS03505 PF02397 Bacterial sugar transferase AMYT_RS03515 PF00483 Nucleotidyl transferase AMYT_RS03525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMYT_RS03530 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS03535 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS03540 PF00456 Transketolase, thiamine diphosphate binding domain AMYT_RS03545 PF02779 Transketolase, pyrimidine binding domain AMYT_RS03545 PF02780 Transketolase, C-terminal domain AMYT_RS03560 PF00535 Glycosyl transferase family 2 AMYT_RS03570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMYT_RS03570 PF00005 ABC transporter AMYT_RS03575 PF00005 ABC transporter AMYT_RS03580 PF12911 N-terminal TM domain of oligopeptide transport permease C AMYT_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS03590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMYT_RS03595 PF01047 MarR family AMYT_RS03600 PF00106 short chain dehydrogenase AMYT_RS03605 PF00563 EAL domain AMYT_RS03605 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS03605 PF03707 Bacterial signalling protein N terminal repeat AMYT_RS03610 PF00672 HAMP domain AMYT_RS03610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS03610 PF02203 Tar ligand binding domain homologue AMYT_RS03615 PF00672 HAMP domain AMYT_RS03615 PF02203 Tar ligand binding domain homologue AMYT_RS03615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS03620 PF00137 ATP synthase subunit C AMYT_RS03645 PF04116 Fatty acid hydroxylase superfamily AMYT_RS03650 PF03150 Di-haem cytochrome c peroxidase AMYT_RS03675 PF02311 AraC-like ligand binding domain AMYT_RS03675 PF12833 Helix-turn-helix domain AMYT_RS03690 PF03824 High-affinity nickel-transport protein AMYT_RS03700 PF01053 Cys/Met metabolism PLP-dependent enzyme AMYT_RS03705 PF01053 Cys/Met metabolism PLP-dependent enzyme AMYT_RS03710 PF16199 Radical_SAM C-terminal domain AMYT_RS03710 PF04055 Radical SAM superfamily AMYT_RS03715 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMYT_RS03740 PF00717 Peptidase S24-like AMYT_RS03740 PF01726 LexA DNA binding domain AMYT_RS03850 PF14550 Putative phage serine protease XkdF AMYT_RS03960 PF00717 Peptidase S24-like AMYT_RS03960 PF01726 LexA DNA binding domain AMYT_RS03965 PF17932 Tetracyclin repressor-like, C-terminal domain AMYT_RS03965 PF00440 Bacterial regulatory proteins, tetR family AMYT_RS03970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMYT_RS03970 PF00529 HlyD membrane-fusion protein of T1SS AMYT_RS03985 PF00893 Small Multidrug Resistance protein AMYT_RS03990 PF01894 Uncharacterised protein family UPF0047 AMYT_RS04000 PF14268 YoaP-like AMYT_RS04000 PF00583 Acetyltransferase (GNAT) family AMYT_RS04015 PF01883 Iron-sulfur cluster assembly protein AMYT_RS04020 PF02657 Fe-S metabolism associated domain AMYT_RS04025 PF00266 Aminotransferase class-V AMYT_RS04030 PF01458 Uncharacterized protein family (UPF0051) AMYT_RS04035 PF00005 ABC transporter AMYT_RS04040 PF01458 Uncharacterized protein family (UPF0051) AMYT_RS04045 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS04050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMYT_RS04055 PF00266 Aminotransferase class-V AMYT_RS04060 PF01592 NifU-like N terminal domain AMYT_RS04060 PF04324 BFD-like [2Fe-2S] binding domain AMYT_RS04060 PF01106 NifU-like domain AMYT_RS04080 PF00206 Lyase AMYT_RS04080 PF14698 Argininosuccinate lyase C-terminal AMYT_RS04085 PF00072 Response regulator receiver domain AMYT_RS04085 PF01584 CheW-like domain AMYT_RS04090 PF00899 ThiF family AMYT_RS04095 PF03449 Transcription elongation factor, N-terminal AMYT_RS04095 PF01272 Transcription elongation factor, GreA/GreB, C-term AMYT_RS04100 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMYT_RS04100 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMYT_RS04115 PF00271 Helicase conserved C-terminal domain AMYT_RS04115 PF04851 Type III restriction enzyme, res subunit AMYT_RS04115 PF02151 UvrB/uvrC motif AMYT_RS04115 PF12344 Ultra-violet resistance protein B AMYT_RS04115 PF17757 UvrB interaction domain AMYT_RS04120 PF00072 Response regulator receiver domain AMYT_RS04120 PF00211 Adenylate and Guanylate cyclase catalytic domain AMYT_RS04135 PF00633 Helix-hairpin-helix motif AMYT_RS04135 PF00730 HhH-GPD superfamily base excision DNA repair protein AMYT_RS04135 PF10576 Iron-sulfur binding domain of endonuclease III AMYT_RS04160 PF02502 Ribose/Galactose Isomerase AMYT_RS04165 PF10502 Signal peptidase, peptidase S26 AMYT_RS04170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMYT_RS04170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMYT_RS04180 PF01386 Ribosomal L25p family AMYT_RS04180 PF14693 Ribosomal protein TL5, C-terminal domain AMYT_RS04185 PF01195 Peptidyl-tRNA hydrolase AMYT_RS04200 PF01520 N-acetylmuramoyl-L-alanine amidase AMYT_RS04210 PF01479 S4 domain AMYT_RS04210 PF00579 tRNA synthetases class I (W and Y) AMYT_RS04215 PF04607 Region found in RelA / SpoT proteins AMYT_RS04215 PF13291 ACT domain AMYT_RS04215 PF02824 TGS domain AMYT_RS04220 PF01192 RNA polymerase Rpb6 AMYT_RS04225 PF00696 Amino acid kinase family AMYT_RS04235 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMYT_RS04240 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMYT_RS04245 PF00211 Adenylate and Guanylate cyclase catalytic domain AMYT_RS04260 PF00425 chorismate binding enzyme AMYT_RS04260 PF04715 Anthranilate synthase component I, N terminal region AMYT_RS04270 PF00464 Serine hydroxymethyltransferase AMYT_RS04275 PF01336 OB-fold nucleic acid binding domain AMYT_RS04275 PF00152 tRNA synthetases class II (D, K and N) AMYT_RS04290 PF04551 GcpE protein AMYT_RS04295 PF00772 DnaB-like helicase N terminal domain AMYT_RS04295 PF03796 DnaB-like helicase C terminal domain AMYT_RS04300 PF00483 Nucleotidyl transferase AMYT_RS04305 PF00342 Phosphoglucose isomerase AMYT_RS04310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMYT_RS04310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMYT_RS04310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMYT_RS04315 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS04320 PF00483 Nucleotidyl transferase AMYT_RS04325 PF16363 GDP-mannose 4,6 dehydratase AMYT_RS04330 PF05523 WxcM-like, C-terminal AMYT_RS04335 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS04340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMYT_RS04380 PF00106 short chain dehydrogenase AMYT_RS04385 PF04030 D-arabinono-1,4-lactone oxidase AMYT_RS04385 PF01565 FAD binding domain AMYT_RS04400 PF02719 Polysaccharide biosynthesis protein AMYT_RS04400 PF08485 Polysaccharide biosynthesis protein C-terminal AMYT_RS04405 PF02350 UDP-N-acetylglucosamine 2-epimerase AMYT_RS04415 PF02397 Bacterial sugar transferase AMYT_RS04435 PF00551 Formyl transferase AMYT_RS04435 PF02911 Formyl transferase, C-terminal domain AMYT_RS04445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMYT_RS04450 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMYT_RS04450 PF10371 Domain of unknown function AMYT_RS04450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMYT_RS04450 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMYT_RS04450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMYT_RS04460 PF02719 Polysaccharide biosynthesis protein AMYT_RS04465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMYT_RS04470 PF17836 PglD N-terminal domain AMYT_RS04470 PF14602 Hexapeptide repeat of succinyl-transferase AMYT_RS04470 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS04480 PF01575 MaoC like domain AMYT_RS04485 PF00535 Glycosyl transferase family 2 AMYT_RS04485 PF01501 Glycosyl transferase family 8 AMYT_RS04490 PF03102 NeuB family AMYT_RS04490 PF08666 SAF domain AMYT_RS04495 PF02348 Cytidylyltransferase AMYT_RS04505 PF00483 Nucleotidyl transferase AMYT_RS04520 PF00795 Carbon-nitrogen hydrolase AMYT_RS04520 PF02540 NAD synthase AMYT_RS04525 PF00117 Glutamine amidotransferase class-I AMYT_RS04530 PF00977 Histidine biosynthesis protein AMYT_RS04540 PF02719 Polysaccharide biosynthesis protein AMYT_RS04540 PF08485 Polysaccharide biosynthesis protein C-terminal AMYT_RS04545 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS04550 PF02350 UDP-N-acetylglucosamine 2-epimerase AMYT_RS04555 PF13579 Glycosyl transferase 4-like domain AMYT_RS04560 PF00953 Glycosyl transferase family 4 AMYT_RS04565 PF02719 Polysaccharide biosynthesis protein AMYT_RS04575 PF08645 Polynucleotide kinase 3 phosphatase AMYT_RS04580 PF01370 NAD dependent epimerase/dehydratase family AMYT_RS04585 PF01467 Cytidylyltransferase-like AMYT_RS04585 PF00294 pfkB family carbohydrate kinase AMYT_RS04590 PF00156 Phosphoribosyl transferase domain AMYT_RS04595 PF00291 Pyridoxal-phosphate dependent enzyme AMYT_RS04605 PF00883 Cytosol aminopeptidase family, catalytic domain AMYT_RS04605 PF02789 Cytosol aminopeptidase family, N-terminal domain AMYT_RS04610 PF02001 Protein of unknown function DUF134 AMYT_RS04620 PF01654 Cytochrome bd terminal oxidase subunit I AMYT_RS04635 PF00384 Molybdopterin oxidoreductase AMYT_RS04635 PF18364 Molybdopterin oxidoreductase N-terminal domain AMYT_RS04635 PF01568 Molydopterin dinucleotide binding domain AMYT_RS04645 PF00072 Response regulator receiver domain AMYT_RS04645 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS04650 PF18698 Histidine kinase sensor domain AMYT_RS04650 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS04650 PF00672 HAMP domain AMYT_RS04655 PF01926 50S ribosome-binding GTPase AMYT_RS04655 PF06071 Protein of unknown function (DUF933) AMYT_RS04675 PF06865 Pyrimidine/purine nucleoside phosphorylase AMYT_RS04680 PF05573 NosL AMYT_RS04690 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS04690 PF00593 TonB dependent receptor AMYT_RS04725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS04725 PF02203 Tar ligand binding domain homologue AMYT_RS04725 PF00672 HAMP domain AMYT_RS04740 PF01142 tRNA pseudouridine synthase D (TruD) AMYT_RS04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS04750 PF00672 HAMP domain AMYT_RS04750 PF02203 Tar ligand binding domain homologue AMYT_RS04755 PF07499 RuvA, C-terminal domain AMYT_RS04755 PF01330 RuvA N terminal domain AMYT_RS04760 PF07478 D-ala D-ala ligase C-terminus AMYT_RS04760 PF01820 D-ala D-ala ligase N-terminus AMYT_RS04770 PF02875 Mur ligase family, glutamate ligase domain AMYT_RS04770 PF08245 Mur ligase middle domain AMYT_RS04775 PF01230 HIT domain AMYT_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS04790 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS04795 PF00005 ABC transporter AMYT_RS04805 PF01266 FAD dependent oxidoreductase AMYT_RS04810 PF00905 Penicillin binding protein transpeptidase domain AMYT_RS04820 PF00338 Ribosomal protein S10p/S20e AMYT_RS04825 PF00297 Ribosomal protein L3 AMYT_RS04830 PF00573 Ribosomal protein L4/L1 family AMYT_RS04835 PF00276 Ribosomal protein L23 AMYT_RS04840 PF03947 Ribosomal Proteins L2, C-terminal domain AMYT_RS04840 PF00181 Ribosomal Proteins L2, RNA binding domain AMYT_RS04845 PF00203 Ribosomal protein S19 AMYT_RS04850 PF00237 Ribosomal protein L22p/L17e AMYT_RS04855 PF00189 Ribosomal protein S3, C-terminal domain AMYT_RS04855 PF07650 KH domain AMYT_RS04860 PF00252 Ribosomal protein L16p/L10e AMYT_RS04865 PF00831 Ribosomal L29 protein AMYT_RS04870 PF00366 Ribosomal protein S17 AMYT_RS04875 PF00238 Ribosomal protein L14p/L23e AMYT_RS04880 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMYT_RS04880 PF00467 KOW motif AMYT_RS04885 PF00281 Ribosomal protein L5 AMYT_RS04885 PF00673 ribosomal L5P family C-terminus AMYT_RS04890 PF00253 Ribosomal protein S14p/S29e AMYT_RS04895 PF00410 Ribosomal protein S8 AMYT_RS04900 PF00347 Ribosomal protein L6 AMYT_RS04905 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMYT_RS04910 PF00333 Ribosomal protein S5, N-terminal domain AMYT_RS04910 PF03719 Ribosomal protein S5, C-terminal domain AMYT_RS04915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMYT_RS04920 PF00344 SecY translocase AMYT_RS04925 PF00557 Metallopeptidase family M24 AMYT_RS04930 PF01176 Translation initiation factor 1A / IF-1 AMYT_RS04935 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS04945 PF03167 Uracil DNA glycosylase superfamily AMYT_RS04955 PF00152 tRNA synthetases class II (D, K and N) AMYT_RS04955 PF01336 OB-fold nucleic acid binding domain AMYT_RS04955 PF02938 GAD domain AMYT_RS04970 PF04055 Radical SAM superfamily AMYT_RS04970 PF08497 Radical SAM N-terminal AMYT_RS04980 PF02464 Competence-damaged protein AMYT_RS04980 PF18146 Damage-inducible protein CinA KH domain AMYT_RS04980 PF00994 Probable molybdopterin binding domain AMYT_RS04990 PF01168 Alanine racemase, N-terminal domain AMYT_RS04990 PF00842 Alanine racemase, C-terminal domain AMYT_RS04995 PF08459 UvrC Helix-hairpin-helix N-terminal AMYT_RS04995 PF02151 UvrB/uvrC motif AMYT_RS04995 PF01541 GIY-YIG catalytic domain AMYT_RS05005 PF02586 SOS response associated peptidase (SRAP) AMYT_RS05035 PF01556 DnaJ C terminal domain AMYT_RS05035 PF00684 DnaJ central domain AMYT_RS05035 PF00226 DnaJ domain AMYT_RS05040 PF02652 L-lactate permease AMYT_RS05045 PF17200 Single Cache domain 2 AMYT_RS05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS05045 PF00672 HAMP domain AMYT_RS05055 PF00226 DnaJ domain AMYT_RS05055 PF01556 DnaJ C terminal domain AMYT_RS05055 PF00684 DnaJ central domain AMYT_RS05070 PF04055 Radical SAM superfamily AMYT_RS05070 PF00919 Uncharacterized protein family UPF0004 AMYT_RS05070 PF01938 TRAM domain AMYT_RS05075 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AMYT_RS05080 PF03372 Endonuclease/Exonuclease/phosphatase family AMYT_RS05120 PF01235 Sodium:alanine symporter family AMYT_RS05130 PF02743 Cache domain AMYT_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05130 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS05135 PF00196 Bacterial regulatory proteins, luxR family AMYT_RS05135 PF00072 Response regulator receiver domain AMYT_RS05145 PF00206 Lyase AMYT_RS05145 PF10415 Fumarase C C-terminus AMYT_RS05155 PF10415 Fumarase C C-terminus AMYT_RS05155 PF00206 Lyase AMYT_RS05165 PF00210 Ferritin-like domain AMYT_RS05170 PF01368 DHH family AMYT_RS05170 PF02833 DHHA2 domain AMYT_RS05175 PF01925 Sulfite exporter TauE/SafE AMYT_RS05180 PF03352 Methyladenine glycosylase AMYT_RS05180 PF13673 Acetyltransferase (GNAT) domain AMYT_RS05180 PF13302 Acetyltransferase (GNAT) domain AMYT_RS05180 PF00958 GMP synthase C terminal domain AMYT_RS05180 PF00117 Glutamine amidotransferase class-I AMYT_RS05185 PF02311 AraC-like ligand binding domain AMYT_RS05185 PF12833 Helix-turn-helix domain AMYT_RS05190 PF08502 LeuA allosteric (dimerisation) domain AMYT_RS05190 PF00682 HMGL-like AMYT_RS05200 PF00491 Arginase family AMYT_RS05205 PF08713 DNA alkylation repair enzyme AMYT_RS05210 PF04073 Aminoacyl-tRNA editing domain AMYT_RS05215 PF05088 Bacterial NAD-glutamate dehydrogenase AMYT_RS05250 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS05250 PF03707 Bacterial signalling protein N terminal repeat AMYT_RS05250 PF00563 EAL domain AMYT_RS05255 PF00183 Hsp90 protein AMYT_RS05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS05270 PF03466 LysR substrate binding domain AMYT_RS05315 PF00672 HAMP domain AMYT_RS05315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS05315 PF17200 Single Cache domain 2 AMYT_RS05320 PF02203 Tar ligand binding domain homologue AMYT_RS05320 PF00672 HAMP domain AMYT_RS05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS05325 PF12833 Helix-turn-helix domain AMYT_RS05325 PF00072 Response regulator receiver domain AMYT_RS05330 PF03480 Bacterial extracellular solute-binding protein, family 7 AMYT_RS05340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMYT_RS05345 PF03746 LamB/YcsF family AMYT_RS05355 PF02626 Carboxyltransferase domain, subdomain A and B AMYT_RS05365 PF08495 FIST N domain AMYT_RS05365 PF00563 EAL domain AMYT_RS05365 PF10442 FIST C domain AMYT_RS05365 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS05375 PF16921 Tex protein YqgF-like domain AMYT_RS05375 PF09371 Tex-like protein N-terminal domain AMYT_RS05375 PF00575 S1 RNA binding domain AMYT_RS05375 PF17674 HHH domain AMYT_RS05380 PF00672 HAMP domain AMYT_RS05380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS05380 PF02203 Tar ligand binding domain homologue AMYT_RS05385 PF00271 Helicase conserved C-terminal domain AMYT_RS05385 PF03880 DbpA RNA binding domain AMYT_RS05385 PF00270 DEAD/DEAH box helicase AMYT_RS05405 PF00925 GTP cyclohydrolase II AMYT_RS05410 PF00672 HAMP domain AMYT_RS05410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS05410 PF02203 Tar ligand binding domain homologue AMYT_RS05415 PF03150 Di-haem cytochrome c peroxidase AMYT_RS05415 PF00034 Cytochrome c AMYT_RS05445 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS05445 PF00593 TonB dependent receptor AMYT_RS05450 PF00072 Response regulator receiver domain AMYT_RS05450 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS05455 PF12282 Signal transduction histidine kinase AMYT_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05455 PF07568 Histidine kinase AMYT_RS05465 PF07568 Histidine kinase AMYT_RS05465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05465 PF12282 Signal transduction histidine kinase AMYT_RS05470 PF01966 HD domain AMYT_RS05480 PF13638 PIN domain AMYT_RS05480 PF02562 PhoH-like protein AMYT_RS05490 PF00009 Elongation factor Tu GTP binding domain AMYT_RS05490 PF03144 Elongation factor Tu domain 2 AMYT_RS05490 PF09106 Elongation factor SelB, winged helix AMYT_RS05490 PF09105 Elongation factor SelB, winged helix AMYT_RS05490 PF09107 Elongation factor SelB, winged helix AMYT_RS05495 PF03841 L-seryl-tRNA selenium transferase AMYT_RS05510 PF00586 AIR synthase related protein, N-terminal domain AMYT_RS05510 PF02769 AIR synthase related protein, C-terminal domain AMYT_RS05515 PF01841 Transglutaminase-like superfamily AMYT_RS05525 PF00403 Heavy-metal-associated domain AMYT_RS05530 PF00158 Sigma-54 interaction domain AMYT_RS05530 PF00072 Response regulator receiver domain AMYT_RS05535 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS05560 PF01568 Molydopterin dinucleotide binding domain AMYT_RS05560 PF00384 Molybdopterin oxidoreductase AMYT_RS05565 PF01568 Molydopterin dinucleotide binding domain AMYT_RS05565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS05565 PF00384 Molybdopterin oxidoreductase AMYT_RS05570 PF13247 4Fe-4S dicluster domain AMYT_RS05590 PF01568 Molydopterin dinucleotide binding domain AMYT_RS05590 PF00037 4Fe-4S binding domain AMYT_RS05590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMYT_RS05590 PF00384 Molybdopterin oxidoreductase AMYT_RS05590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS05595 PF00384 Molybdopterin oxidoreductase AMYT_RS05595 PF01568 Molydopterin dinucleotide binding domain AMYT_RS05595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS05600 PF13247 4Fe-4S dicluster domain AMYT_RS05610 PF02634 FdhD/NarQ family AMYT_RS05620 PF03459 TOBE domain AMYT_RS05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS05625 PF00266 Aminotransferase class-V AMYT_RS05630 PF00994 Probable molybdopterin binding domain AMYT_RS05630 PF03454 MoeA C-terminal region (domain IV) AMYT_RS05630 PF03453 MoeA N-terminal region (domain I and II) AMYT_RS05635 PF12849 PBP superfamily domain AMYT_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS05645 PF00005 ABC transporter AMYT_RS05655 PF08402 TOBE domain AMYT_RS05655 PF00005 ABC transporter AMYT_RS05660 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS05670 PF00561 alpha/beta hydrolase fold AMYT_RS05690 PF17827 PrmC N-terminal domain AMYT_RS05690 PF13847 Methyltransferase domain AMYT_RS05695 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMYT_RS05700 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AMYT_RS05725 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS05730 PF00999 Sodium/hydrogen exchanger family AMYT_RS05730 PF02254 TrkA-N domain AMYT_RS05735 PF00072 Response regulator receiver domain AMYT_RS05735 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS05745 PF01965 DJ-1/PfpI family AMYT_RS05755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMYT_RS05755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMYT_RS05775 PF12792 CSS motif domain associated with EAL AMYT_RS05775 PF00563 EAL domain AMYT_RS05780 PF02600 Disulfide bond formation protein DsbB AMYT_RS05790 PF08534 Redoxin AMYT_RS05795 PF03009 Glycerophosphoryl diester phosphodiesterase family AMYT_RS05800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMYT_RS05800 PF01266 FAD dependent oxidoreductase AMYT_RS05805 PF12833 Helix-turn-helix domain AMYT_RS05810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMYT_RS05810 PF00289 Biotin carboxylase, N-terminal domain AMYT_RS05810 PF02785 Biotin carboxylase C-terminal domain AMYT_RS05815 PF00484 Carbonic anhydrase AMYT_RS05820 PF03737 Aldolase/RraA AMYT_RS05825 PF04231 Endonuclease I AMYT_RS05840 PF00194 Eukaryotic-type carbonic anhydrase AMYT_RS05850 PF03352 Methyladenine glycosylase AMYT_RS05850 PF00958 GMP synthase C terminal domain AMYT_RS05850 PF00117 Glutamine amidotransferase class-I AMYT_RS05850 PF13302 Acetyltransferase (GNAT) domain AMYT_RS05850 PF13673 Acetyltransferase (GNAT) domain AMYT_RS05870 PF11965 Domain of unknown function (DUF3479) AMYT_RS05870 PF02514 CobN/Magnesium Chelatase AMYT_RS05875 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS05875 PF00593 TonB dependent receptor AMYT_RS05915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMYT_RS05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05915 PF01627 Hpt domain AMYT_RS05915 PF00672 HAMP domain AMYT_RS05915 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS05915 PF00072 Response regulator receiver domain AMYT_RS05920 PF01627 Hpt domain AMYT_RS05920 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05920 PF00672 HAMP domain AMYT_RS05920 PF00072 Response regulator receiver domain AMYT_RS05920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMYT_RS05925 PF08448 PAS fold AMYT_RS05925 PF08447 PAS fold AMYT_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05930 PF00072 Response regulator receiver domain AMYT_RS05930 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS05940 PF00072 Response regulator receiver domain AMYT_RS05945 PF10442 FIST C domain AMYT_RS05945 PF00563 EAL domain AMYT_RS05945 PF08495 FIST N domain AMYT_RS05945 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS05955 PF03641 Possible lysine decarboxylase AMYT_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS05960 PF08447 PAS fold AMYT_RS05960 PF00989 PAS fold AMYT_RS05960 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS05980 PF01551 Peptidase family M23 AMYT_RS05980 PF08525 Opacity-associated protein A N-terminal motif AMYT_RS05980 PF01476 LysM domain AMYT_RS05985 PF01709 Transcriptional regulator AMYT_RS06010 PF02770 Acyl-CoA dehydrogenase, middle domain AMYT_RS06010 PF09317 Domain of unknown function (DUF1974) AMYT_RS06010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMYT_RS06010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMYT_RS06015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMYT_RS06015 PF00378 Enoyl-CoA hydratase/isomerase AMYT_RS06015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMYT_RS06020 PF00108 Thiolase, N-terminal domain AMYT_RS06020 PF02803 Thiolase, C-terminal domain AMYT_RS06025 PF00501 AMP-binding enzyme AMYT_RS06030 PF11791 Aconitate B N-terminal domain AMYT_RS06030 PF06434 Aconitate hydratase 2 N-terminus AMYT_RS06030 PF00330 Aconitase family (aconitate hydratase) AMYT_RS06035 PF18665 Tetracyclin repressor-like, C-terminal domain AMYT_RS06035 PF00440 Bacterial regulatory proteins, tetR family AMYT_RS06040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMYT_RS06040 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AMYT_RS06045 PF00374 Nickel-dependent hydrogenase AMYT_RS06050 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AMYT_RS06050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMYT_RS06050 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMYT_RS06055 PF00374 Nickel-dependent hydrogenase AMYT_RS06060 PF01292 Prokaryotic cytochrome b561 AMYT_RS06065 PF01750 Hydrogenase maturation protease AMYT_RS06075 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AMYT_RS06075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMYT_RS06075 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMYT_RS06080 PF00374 Nickel-dependent hydrogenase AMYT_RS06085 PF01292 Prokaryotic cytochrome b561 AMYT_RS06090 PF01750 Hydrogenase maturation protease AMYT_RS06100 PF01300 Telomere recombination AMYT_RS06100 PF07503 HypF finger AMYT_RS06100 PF00708 Acylphosphatase AMYT_RS06100 PF17788 HypF Kae1-like domain AMYT_RS06105 PF00209 Sodium:neurotransmitter symporter family AMYT_RS06110 PF12823 Domain of unknown function (DUF3817) AMYT_RS06115 PF02203 Tar ligand binding domain homologue AMYT_RS06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS06115 PF00672 HAMP domain AMYT_RS06125 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMYT_RS06130 PF01455 HupF/HypC family AMYT_RS06135 PF01924 Hydrogenase formation hypA family AMYT_RS06140 PF02769 AIR synthase related protein, C-terminal domain AMYT_RS06140 PF00586 AIR synthase related protein, N-terminal domain AMYT_RS06145 PF02911 Formyl transferase, C-terminal domain AMYT_RS06145 PF00551 Formyl transferase AMYT_RS06145 PF00378 Enoyl-CoA hydratase/isomerase AMYT_RS06150 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AMYT_RS06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS06160 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS06160 PF01627 Hpt domain AMYT_RS06160 PF00989 PAS fold AMYT_RS06160 PF00072 Response regulator receiver domain AMYT_RS06160 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMYT_RS06170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMYT_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS06180 PF12911 N-terminal TM domain of oligopeptide transport permease C AMYT_RS06185 PF00005 ABC transporter AMYT_RS06190 PF00005 ABC transporter AMYT_RS06195 PF01554 MatE AMYT_RS06205 PF02653 Branched-chain amino acid transport system / permease component AMYT_RS06210 PF02653 Branched-chain amino acid transport system / permease component AMYT_RS06210 PF11862 Domain of unknown function (DUF3382) AMYT_RS06215 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMYT_RS06215 PF00005 ABC transporter AMYT_RS06220 PF00005 ABC transporter AMYT_RS06225 PF01914 MarC family integral membrane protein AMYT_RS06235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS06235 PF14824 Sirohaem biosynthesis protein central AMYT_RS06235 PF10414 Sirohaem synthase dimerisation region AMYT_RS06255 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMYT_RS06255 PF00270 DEAD/DEAH box helicase AMYT_RS06255 PF18074 Primosomal protein N C-terminal domain AMYT_RS06255 PF00271 Helicase conserved C-terminal domain AMYT_RS06255 PF17764 3′ DNA-binding domain (3′BD) AMYT_RS06260 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMYT_RS06260 PF14602 Hexapeptide repeat of succinyl-transferase AMYT_RS06285 PF00005 ABC transporter AMYT_RS06290 PF02390 Putative methyltransferase AMYT_RS06300 PF00849 RNA pseudouridylate synthase AMYT_RS06300 PF01479 S4 domain AMYT_RS06305 PF01098 Cell cycle protein AMYT_RS06315 PF03707 Bacterial signalling protein N terminal repeat AMYT_RS06315 PF00563 EAL domain AMYT_RS06315 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS06325 PF00202 Aminotransferase class-III AMYT_RS06330 PF06865 Pyrimidine/purine nucleoside phosphorylase AMYT_RS06350 PF04539 Sigma-70 region 3 AMYT_RS06350 PF04542 Sigma-70 region 2 AMYT_RS06350 PF04545 Sigma-70, region 4 AMYT_RS06350 PF00140 Sigma-70 factor, region 1.2 AMYT_RS06355 PF00694 Aconitase C-terminal domain AMYT_RS06360 PF00180 Isocitrate/isopropylmalate dehydrogenase AMYT_RS06380 PF00444 Ribosomal protein L36 AMYT_RS06385 PF00416 Ribosomal protein S13/S18 AMYT_RS06390 PF00411 Ribosomal protein S11 AMYT_RS06395 PF00163 Ribosomal protein S4/S9 N-terminal domain AMYT_RS06395 PF01479 S4 domain AMYT_RS06400 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMYT_RS06400 PF01000 RNA polymerase Rpb3/RpoA insert domain AMYT_RS06400 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMYT_RS06405 PF01196 Ribosomal protein L17 AMYT_RS06410 PF01425 Amidase AMYT_RS06415 PF00571 CBS domain AMYT_RS06415 PF00478 IMP dehydrogenase / GMP reductase domain AMYT_RS06425 PF03641 Possible lysine decarboxylase AMYT_RS06460 PF00561 alpha/beta hydrolase fold AMYT_RS06465 PF02609 Exonuclease VII small subunit AMYT_RS06470 PF00899 ThiF family AMYT_RS06475 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMYT_RS06475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMYT_RS06475 PF02142 MGS-like domain AMYT_RS06495 PF12792 CSS motif domain associated with EAL AMYT_RS06495 PF00563 EAL domain AMYT_RS06510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMYT_RS06515 PF00873 AcrB/AcrD/AcrF family AMYT_RS06520 PF00440 Bacterial regulatory proteins, tetR family AMYT_RS06520 PF17932 Tetracyclin repressor-like, C-terminal domain AMYT_RS06525 PF08448 PAS fold AMYT_RS06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS06525 PF08447 PAS fold AMYT_RS06530 PF13407 Periplasmic binding protein domain AMYT_RS06535 PF01761 3-dehydroquinate synthase AMYT_RS06545 PF04055 Radical SAM superfamily AMYT_RS06545 PF00919 Uncharacterized protein family UPF0004 AMYT_RS06550 PF01434 Peptidase family M41 AMYT_RS06550 PF17862 AAA+ lid domain AMYT_RS06550 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS06560 PF00994 Probable molybdopterin binding domain AMYT_RS06565 PF00939 Sodium:sulfate symporter transmembrane region AMYT_RS06570 PF01713 Smr domain AMYT_RS06570 PF00488 MutS domain V AMYT_RS06575 PF00924 Mechanosensitive ion channel AMYT_RS06575 PF05552 Conserved TM helix AMYT_RS06590 PF07687 Peptidase dimerisation domain AMYT_RS06590 PF01546 Peptidase family M20/M25/M40 AMYT_RS06595 PF13673 Acetyltransferase (GNAT) domain AMYT_RS06610 PF01177 Asp/Glu/Hydantoin racemase AMYT_RS06635 PF00392 Bacterial regulatory proteins, gntR family AMYT_RS06635 PF00155 Aminotransferase class I and II AMYT_RS06640 PF03473 MOSC domain AMYT_RS06670 PF01638 HxlR-like helix-turn-helix AMYT_RS06690 PF00881 Nitroreductase family AMYT_RS06695 PF00072 Response regulator receiver domain AMYT_RS06705 PF03109 ABC1 family AMYT_RS06735 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMYT_RS06740 PF00072 Response regulator receiver domain AMYT_RS06745 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMYT_RS06745 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMYT_RS06750 PF08402 TOBE domain AMYT_RS06750 PF00005 ABC transporter AMYT_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS06770 PF03459 TOBE domain AMYT_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS06775 PF00072 Response regulator receiver domain AMYT_RS06780 PF01739 CheR methyltransferase, SAM binding domain AMYT_RS06780 PF03705 CheR methyltransferase, all-alpha domain AMYT_RS06785 PF00672 HAMP domain AMYT_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS06785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMYT_RS06785 PF00072 Response regulator receiver domain AMYT_RS06785 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS06785 PF01627 Hpt domain AMYT_RS06790 PF00005 ABC transporter AMYT_RS06790 PF12848 ABC transporter AMYT_RS06795 PF03061 Thioesterase superfamily AMYT_RS06800 PF03061 Thioesterase superfamily AMYT_RS06805 PF00533 BRCA1 C Terminus (BRCT) domain AMYT_RS06805 PF01653 NAD-dependent DNA ligase adenylation domain AMYT_RS06805 PF03120 NAD-dependent DNA ligase OB-fold domain AMYT_RS06805 PF12826 Helix-hairpin-helix motif AMYT_RS06815 PF03881 Fructosamine kinase AMYT_RS06820 PF01613 Flavin reductase like domain AMYT_RS06825 PF10415 Fumarase C C-terminus AMYT_RS06825 PF00206 Lyase AMYT_RS06845 PF01575 MaoC like domain AMYT_RS06850 PF00501 AMP-binding enzyme AMYT_RS06850 PF13193 AMP-binding enzyme C-terminal domain AMYT_RS06865 PF07687 Peptidase dimerisation domain AMYT_RS06865 PF01546 Peptidase family M20/M25/M40 AMYT_RS06870 PF00563 EAL domain AMYT_RS06870 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS06870 PF10442 FIST C domain AMYT_RS06870 PF08495 FIST N domain AMYT_RS06875 PF01578 Cytochrome C assembly protein AMYT_RS06875 PF05140 ResB-like family AMYT_RS06880 PF08003 Protein of unknown function (DUF1698) AMYT_RS06885 PF01590 GAF domain AMYT_RS06885 PF00563 EAL domain AMYT_RS06885 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS06885 PF00360 Phytochrome region AMYT_RS06890 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS06890 PF17158 Membrane-associated sensor, integral membrane domain AMYT_RS06895 PF00753 Metallo-beta-lactamase superfamily AMYT_RS06900 PF04305 Protein of unknown function (DUF455) AMYT_RS06905 PF00291 Pyridoxal-phosphate dependent enzyme AMYT_RS06910 PF13188 PAS domain AMYT_RS06910 PF08448 PAS fold AMYT_RS06910 PF00072 Response regulator receiver domain AMYT_RS06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS06910 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS06915 PF07702 UTRA domain AMYT_RS06915 PF00392 Bacterial regulatory proteins, gntR family AMYT_RS06920 PF00005 ABC transporter AMYT_RS06925 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMYT_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS06945 PF05861 Bacterial phosphonate metabolism protein (PhnI) AMYT_RS06950 PF06007 Phosphonate metabolism protein PhnJ AMYT_RS06955 PF00005 ABC transporter AMYT_RS06960 PF00005 ABC transporter AMYT_RS06965 PF07969 Amidohydrolase family AMYT_RS06980 PF00226 DnaJ domain AMYT_RS06980 PF01556 DnaJ C terminal domain AMYT_RS06980 PF00684 DnaJ central domain AMYT_RS06985 PF02132 RecR protein AMYT_RS06985 PF13662 Toprim domain AMYT_RS06990 PF08447 PAS fold AMYT_RS06990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS06995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS06995 PF00672 HAMP domain AMYT_RS06995 PF02203 Tar ligand binding domain homologue AMYT_RS07005 PF08447 PAS fold AMYT_RS07005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07015 PF00989 PAS fold AMYT_RS07015 PF08447 PAS fold AMYT_RS07015 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS07020 PF12833 Helix-turn-helix domain AMYT_RS07020 PF00072 Response regulator receiver domain AMYT_RS07025 PF12833 Helix-turn-helix domain AMYT_RS07025 PF00072 Response regulator receiver domain AMYT_RS07030 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS07035 PF00764 Arginosuccinate synthase AMYT_RS07045 PF00591 Glycosyl transferase family, a/b domain AMYT_RS07045 PF02885 Glycosyl transferase family, helical bundle domain AMYT_RS07055 PF00005 ABC transporter AMYT_RS07055 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMYT_RS07060 PF08448 PAS fold AMYT_RS07060 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS07065 PF08448 PAS fold AMYT_RS07065 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS07065 PF00563 EAL domain AMYT_RS07070 PF02348 Cytidylyltransferase AMYT_RS07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07075 PF00072 Response regulator receiver domain AMYT_RS07075 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS07075 PF13188 PAS domain AMYT_RS07075 PF08448 PAS fold AMYT_RS07080 PF01367 5'-3' exonuclease, C-terminal SAM fold AMYT_RS07080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMYT_RS07080 PF00476 DNA polymerase family A AMYT_RS07080 PF01612 3'-5' exonuclease AMYT_RS07100 PF08447 PAS fold AMYT_RS07100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS07105 PF01790 Prolipoprotein diacylglyceryl transferase AMYT_RS07115 PF06969 HemN C-terminal domain AMYT_RS07115 PF04055 Radical SAM superfamily AMYT_RS07120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMYT_RS07120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMYT_RS07140 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS07140 PF01627 Hpt domain AMYT_RS07140 PF00072 Response regulator receiver domain AMYT_RS07145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMYT_RS07145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMYT_RS07160 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07160 PF00989 PAS fold AMYT_RS07165 PF00490 Delta-aminolevulinic acid dehydratase AMYT_RS07170 PF00925 GTP cyclohydrolase II AMYT_RS07175 PF02527 rRNA small subunit methyltransferase G AMYT_RS07195 PF02092 Glycyl-tRNA synthetase beta subunit AMYT_RS07240 PF00925 GTP cyclohydrolase II AMYT_RS07240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMYT_RS07250 PF01293 Phosphoenolpyruvate carboxykinase AMYT_RS07255 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMYT_RS07260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMYT_RS07260 PF02817 e3 binding domain AMYT_RS07260 PF00364 Biotin-requiring enzyme AMYT_RS07265 PF04277 Oxaloacetate decarboxylase, gamma chain AMYT_RS07280 PF00133 tRNA synthetases class I (I, L, M and V) AMYT_RS07280 PF09334 tRNA synthetases class I (M) AMYT_RS07280 PF01588 Putative tRNA binding domain AMYT_RS07290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMYT_RS07310 PF02325 YGGT family AMYT_RS07315 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMYT_RS07320 PF05193 Peptidase M16 inactive domain AMYT_RS07325 PF04055 Radical SAM superfamily AMYT_RS07330 PF01103 Surface antigen AMYT_RS07330 PF07244 Surface antigen variable number repeat AMYT_RS07335 PF02153 Prephenate dehydrogenase AMYT_RS07335 PF01842 ACT domain AMYT_RS07340 PF00809 Pterin binding enzyme AMYT_RS07355 PF00696 Amino acid kinase family AMYT_RS07355 PF01842 ACT domain AMYT_RS07355 PF13840 ACT domain AMYT_RS07360 PF00293 NUDIX domain AMYT_RS07365 PF04055 Radical SAM superfamily AMYT_RS07365 PF06969 HemN C-terminal domain AMYT_RS07370 PF17827 PrmC N-terminal domain AMYT_RS07370 PF13847 Methyltransferase domain AMYT_RS07375 PF01432 Peptidase family M3 AMYT_RS07395 PF01810 LysE type translocator AMYT_RS07400 PF00589 Phage integrase family AMYT_RS07400 PF18644 Phage integrase SAM-like domain AMYT_RS07405 PF00072 Response regulator receiver domain AMYT_RS07405 PF01339 CheB methylesterase AMYT_RS07410 PF03975 CheD chemotactic sensory transduction AMYT_RS07415 PF03705 CheR methyltransferase, all-alpha domain AMYT_RS07415 PF01739 CheR methyltransferase, SAM binding domain AMYT_RS07420 PF02895 Signal transducing histidine kinase, homodimeric domain AMYT_RS07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07420 PF01627 Hpt domain AMYT_RS07420 PF09078 CheY binding AMYT_RS07420 PF01584 CheW-like domain AMYT_RS07425 PF00072 Response regulator receiver domain AMYT_RS07430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMYT_RS07430 PF00013 KH domain AMYT_RS07430 PF01138 3' exoribonuclease family, domain 1 AMYT_RS07430 PF03725 3' exoribonuclease family, domain 2 AMYT_RS07430 PF00575 S1 RNA binding domain AMYT_RS07440 PF04453 LPS transport system D AMYT_RS07440 PF03968 OstA-like protein AMYT_RS07450 PF02843 Phosphoribosylglycinamide synthetase, C domain AMYT_RS07450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMYT_RS07450 PF02844 Phosphoribosylglycinamide synthetase, N domain AMYT_RS07460 PF01926 50S ribosome-binding GTPase AMYT_RS07460 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMYT_RS07465 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMYT_RS07465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMYT_RS07470 PF17854 FtsK alpha domain AMYT_RS07470 PF09397 Ftsk gamma domain AMYT_RS07470 PF01580 FtsK/SpoIIIE family AMYT_RS07475 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMYT_RS07475 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS07480 PF10369 Small subunit of acetolactate synthase AMYT_RS07485 PF00205 Thiamine pyrophosphate enzyme, central domain AMYT_RS07485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMYT_RS07485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMYT_RS07490 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS07490 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS07490 PF07196 Flagellin hook IN motif AMYT_RS07495 PF02541 Ppx/GppA phosphatase family AMYT_RS07505 PF00360 Phytochrome region AMYT_RS07505 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS07505 PF00563 EAL domain AMYT_RS07505 PF01590 GAF domain AMYT_RS07520 PF00085 Thioredoxin AMYT_RS07530 PF01171 PP-loop family AMYT_RS07535 PF03553 Na+/H+ antiporter family AMYT_RS07535 PF13726 Na+-H+ antiporter family AMYT_RS07545 PF08443 RimK-like ATP-grasp domain AMYT_RS07545 PF18030 RimK PreATP-grasp domain AMYT_RS07560 PF00171 Aldehyde dehydrogenase family AMYT_RS07565 PF00005 ABC transporter AMYT_RS07570 PF00005 ABC transporter AMYT_RS07570 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMYT_RS07575 PF11862 Domain of unknown function (DUF3382) AMYT_RS07575 PF02653 Branched-chain amino acid transport system / permease component AMYT_RS07580 PF02653 Branched-chain amino acid transport system / permease component AMYT_RS07605 PF00072 Response regulator receiver domain AMYT_RS07605 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS07625 PF00994 Probable molybdopterin binding domain AMYT_RS07625 PF03453 MoeA N-terminal region (domain I and II) AMYT_RS07625 PF03454 MoeA C-terminal region (domain IV) AMYT_RS07635 PF02646 RmuC family AMYT_RS07640 PF16491 CAAX prenyl protease N-terminal, five membrane helices AMYT_RS07640 PF01435 Peptidase family M48 AMYT_RS07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07650 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS07650 PF00989 PAS fold AMYT_RS07650 PF08447 PAS fold AMYT_RS07655 PF03061 Thioesterase superfamily AMYT_RS07685 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07695 PF00248 Aldo/keto reductase family AMYT_RS07710 PF01032 FecCD transport family AMYT_RS07715 PF00005 ABC transporter AMYT_RS07720 PF01497 Periplasmic binding protein AMYT_RS07725 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS07725 PF00593 TonB dependent receptor AMYT_RS07735 PF01636 Phosphotransferase enzyme family AMYT_RS07740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS07755 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMYT_RS07755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMYT_RS07770 PF01888 CbiD AMYT_RS07775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS07780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS07785 PF01890 Cobalamin synthesis G C-terminus AMYT_RS07785 PF11761 Cobalamin biosynthesis central region AMYT_RS07785 PF11760 Cobalamin synthesis G N-terminal AMYT_RS07790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMYT_RS07790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMYT_RS07810 PF09383 NIL domain AMYT_RS07810 PF00005 ABC transporter AMYT_RS07825 PF13419 Haloacid dehalogenase-like hydrolase AMYT_RS07830 PF00672 HAMP domain AMYT_RS07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS07830 PF02203 Tar ligand binding domain homologue AMYT_RS07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS07835 PF02203 Tar ligand binding domain homologue AMYT_RS07835 PF00672 HAMP domain AMYT_RS07845 PF01966 HD domain AMYT_RS07845 PF11871 Domain of unknown function (DUF3391) AMYT_RS07860 PF02472 Biopolymer transport protein ExbD/TolR AMYT_RS07865 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS07875 PF00593 TonB dependent receptor AMYT_RS07875 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS07885 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS07885 PF00072 Response regulator receiver domain AMYT_RS07900 PF00588 SpoU rRNA Methylase family AMYT_RS07905 PF00551 Formyl transferase AMYT_RS07905 PF01842 ACT domain AMYT_RS07910 PF00390 Malic enzyme, N-terminal domain AMYT_RS07910 PF01515 Phosphate acetyl/butaryl transferase AMYT_RS07910 PF03949 Malic enzyme, NAD binding domain AMYT_RS07915 PF02578 Multi-copper polyphenol oxidoreductase laccase AMYT_RS07920 PF08501 Shikimate dehydrogenase substrate binding domain AMYT_RS07975 PF07669 Eco57I restriction-modification methylase AMYT_RS07990 PF00271 Helicase conserved C-terminal domain AMYT_RS07990 PF18337 RapA N-terminal Tudor like domain AMYT_RS07990 PF12137 RNA polymerase recycling family C-terminal AMYT_RS07990 PF18339 RapA N-terminal Tudor like domain 1 AMYT_RS07990 PF00176 SNF2 family N-terminal domain AMYT_RS07995 PF00589 Phage integrase family AMYT_RS08015 PF00005 ABC transporter AMYT_RS08015 PF03412 Peptidase C39 family AMYT_RS08030 PF13476 AAA domain AMYT_RS08035 PF12320 Type 5 capsule protein repressor C-terminal domain AMYT_RS08035 PF00149 Calcineurin-like phosphoesterase AMYT_RS08055 PF02926 THUMP domain AMYT_RS08055 PF02568 Thiamine biosynthesis protein (ThiI) AMYT_RS08065 PF03738 Glutathionylspermidine synthase preATP-grasp AMYT_RS08075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMYT_RS08080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMYT_RS08085 PF02540 NAD synthase AMYT_RS08105 PF00226 DnaJ domain AMYT_RS08105 PF05099 Tellurite resistance protein TerB AMYT_RS08115 PF00902 Sec-independent protein translocase protein (TatC) AMYT_RS08120 PF02547 Queuosine biosynthesis protein AMYT_RS08130 PF00209 Sodium:neurotransmitter symporter family AMYT_RS08140 PF07694 5TMR of 5TMR-LYT AMYT_RS08140 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS08145 PF12867 DinB superfamily AMYT_RS08145 PF03781 Sulfatase-modifying factor enzyme 1 AMYT_RS08160 PF03737 Aldolase/RraA AMYT_RS08165 PF02310 B12 binding domain AMYT_RS08170 PF06368 Methylaspartate mutase E chain (MutE) AMYT_RS08180 PF00501 AMP-binding enzyme AMYT_RS08180 PF13193 AMP-binding enzyme C-terminal domain AMYT_RS08185 PF00034 Cytochrome c AMYT_RS08190 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS08205 PF00873 AcrB/AcrD/AcrF family AMYT_RS08215 PF01795 MraW methylase family AMYT_RS08225 PF00216 Bacterial DNA-binding protein AMYT_RS08235 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMYT_RS08250 PF00884 Sulfatase AMYT_RS08260 PF00583 Acetyltransferase (GNAT) family AMYT_RS08265 PF00202 Aminotransferase class-III AMYT_RS08270 PF06339 Ectoine synthase AMYT_RS08275 PF00696 Amino acid kinase family AMYT_RS08275 PF13840 ACT domain AMYT_RS08285 PF07196 Flagellin hook IN motif AMYT_RS08285 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS08285 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS08310 PF00072 Response regulator receiver domain AMYT_RS08310 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS08360 PF00529 HlyD membrane-fusion protein of T1SS AMYT_RS08365 PF00664 ABC transporter transmembrane region AMYT_RS08365 PF00005 ABC transporter AMYT_RS08365 PF03412 Peptidase C39 family AMYT_RS08400 PF08495 FIST N domain AMYT_RS08400 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS08400 PF10442 FIST C domain AMYT_RS08400 PF00563 EAL domain AMYT_RS08405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS08405 PF00672 HAMP domain AMYT_RS08405 PF17200 Single Cache domain 2 AMYT_RS08410 PF00664 ABC transporter transmembrane region AMYT_RS08410 PF00005 ABC transporter AMYT_RS08415 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMYT_RS08445 PF00271 Helicase conserved C-terminal domain AMYT_RS08445 PF02810 SEC-C motif AMYT_RS08445 PF07517 SecA DEAD-like domain AMYT_RS08445 PF01043 SecA preprotein cross-linking domain AMYT_RS08445 PF07516 SecA Wing and Scaffold domain AMYT_RS08450 PF02687 FtsX-like permease family AMYT_RS08450 PF12704 MacB-like periplasmic core domain AMYT_RS08465 PF03971 Monomeric isocitrate dehydrogenase AMYT_RS08480 PF01266 FAD dependent oxidoreductase AMYT_RS08480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMYT_RS08480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMYT_RS08480 PF01266 FAD dependent oxidoreductase AMYT_RS08490 PF00072 Response regulator receiver domain AMYT_RS08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS08500 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS08505 PF01556 DnaJ C terminal domain AMYT_RS08505 PF00226 DnaJ domain AMYT_RS08510 PF13411 MerR HTH family regulatory protein AMYT_RS08515 PF00091 Tubulin/FtsZ family, GTPase domain AMYT_RS08515 PF12327 FtsZ family, C-terminal domain AMYT_RS08520 PF02491 SHS2 domain inserted in FTSA AMYT_RS08530 PF14490 Helix-hairpin-helix containing domain AMYT_RS08530 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMYT_RS08530 PF13538 UvrD-like helicase C-terminal domain AMYT_RS08540 PF03960 ArsC family AMYT_RS08555 PF01312 FlhB HrpN YscU SpaS Family AMYT_RS08565 PF00905 Penicillin binding protein transpeptidase domain AMYT_RS08565 PF03717 Penicillin-binding Protein dimerisation domain AMYT_RS08570 PF00813 FliP family AMYT_RS08580 PF00583 Acetyltransferase (GNAT) family AMYT_RS08585 PF01926 50S ribosome-binding GTPase AMYT_RS08605 PF00475 Imidazoleglycerol-phosphate dehydratase AMYT_RS08610 PF05036 Sporulation related domain AMYT_RS08610 PF03330 Lytic transglycolase AMYT_RS08615 PF05257 CHAP domain AMYT_RS08615 PF01476 LysM domain AMYT_RS08620 PF01026 TatD related DNase AMYT_RS08630 PF10431 C-terminal, D2-small domain, of ClpB protein AMYT_RS08630 PF07724 AAA domain (Cdc48 subfamily) AMYT_RS08635 PF00227 Proteasome subunit AMYT_RS08640 PF01281 Ribosomal protein L9, N-terminal domain AMYT_RS08640 PF03948 Ribosomal protein L9, C-terminal domain AMYT_RS08650 PF02441 Flavoprotein AMYT_RS08655 PF01467 Cytidylyltransferase-like AMYT_RS08660 PF02223 Thymidylate kinase AMYT_RS08665 PF13393 Histidyl-tRNA synthetase AMYT_RS08665 PF03129 Anticodon binding domain AMYT_RS08670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMYT_RS08670 PF17810 Arginine decarboxylase helical bundle domain AMYT_RS08670 PF17944 Arginine decarboxylase C-terminal helical extension AMYT_RS08675 PF06426 Serine acetyltransferase, N-terminal AMYT_RS08675 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS08680 PF01925 Sulfite exporter TauE/SafE AMYT_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS08685 PF00072 Response regulator receiver domain AMYT_RS08685 PF13426 PAS domain AMYT_RS08690 PF17755 UvrA DNA-binding domain AMYT_RS08690 PF00005 ABC transporter AMYT_RS08690 PF17760 UvrA interaction domain AMYT_RS08705 PF03471 Transporter associated domain AMYT_RS08705 PF01595 Cyclin M transmembrane N-terminal domain AMYT_RS08705 PF00571 CBS domain AMYT_RS08710 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS08710 PF08448 PAS fold AMYT_RS08715 PF01243 Pyridoxamine 5'-phosphate oxidase AMYT_RS08720 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMYT_RS08720 PF01243 Pyridoxamine 5'-phosphate oxidase AMYT_RS08725 PF00255 Glutathione peroxidase AMYT_RS08750 PF03180 NLPA lipoprotein AMYT_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS08760 PF09383 NIL domain AMYT_RS08760 PF00005 ABC transporter AMYT_RS08770 PF07690 Major Facilitator Superfamily AMYT_RS08780 PF00375 Sodium:dicarboxylate symporter family AMYT_RS08790 PF17785 PUA-like domain AMYT_RS08790 PF10672 S-adenosylmethionine-dependent methyltransferase AMYT_RS08795 PF01272 Transcription elongation factor, GreA/GreB, C-term AMYT_RS08795 PF03449 Transcription elongation factor, N-terminal AMYT_RS08810 PF00916 Sulfate permease family AMYT_RS08810 PF01740 STAS domain AMYT_RS08820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS08820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMYT_RS08825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMYT_RS08825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMYT_RS08835 PF00440 Bacterial regulatory proteins, tetR family AMYT_RS08835 PF17932 Tetracyclin repressor-like, C-terminal domain AMYT_RS08840 PF03749 Sugar fermentation stimulation protein RE domain AMYT_RS08840 PF17746 SfsA N-terminal OB domain AMYT_RS08850 PF07995 Glucose / Sorbosone dehydrogenase AMYT_RS08855 PF00270 DEAD/DEAH box helicase AMYT_RS08855 PF04408 Helicase associated domain (HA2) AMYT_RS08855 PF00271 Helicase conserved C-terminal domain AMYT_RS08855 PF08482 ATP-dependent helicase C-terminal AMYT_RS08875 PF00582 Universal stress protein family AMYT_RS08890 PF01906 Putative heavy-metal-binding AMYT_RS08900 PF02567 Phenazine biosynthesis-like protein AMYT_RS08920 PF02540 NAD synthase AMYT_RS08920 PF00958 GMP synthase C terminal domain AMYT_RS08920 PF00117 Glutamine amidotransferase class-I AMYT_RS08930 PF03600 Citrate transporter AMYT_RS08935 PF00890 FAD binding domain AMYT_RS08950 PF00155 Aminotransferase class I and II AMYT_RS08955 PF16916 Dimerisation domain of Zinc Transporter AMYT_RS08955 PF01545 Cation efflux family AMYT_RS08970 PF01717 Cobalamin-independent synthase, Catalytic domain AMYT_RS08970 PF08267 Cobalamin-independent synthase, N-terminal domain AMYT_RS08980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMYT_RS08980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS08985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMYT_RS08985 PF02817 e3 binding domain AMYT_RS08985 PF00364 Biotin-requiring enzyme AMYT_RS08990 PF00456 Transketolase, thiamine diphosphate binding domain AMYT_RS08990 PF17831 Pyruvate dehydrogenase E1 component middle domain AMYT_RS08995 PF03099 Biotin/lipoate A/B protein ligase family AMYT_RS09000 PF04055 Radical SAM superfamily AMYT_RS09005 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMYT_RS09005 PF00056 lactate/malate dehydrogenase, NAD binding domain AMYT_RS09020 PF12848 ABC transporter AMYT_RS09020 PF00005 ABC transporter AMYT_RS09020 PF16326 ABC transporter C-terminal domain AMYT_RS09030 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS09035 PF01966 HD domain AMYT_RS09040 PF00563 EAL domain AMYT_RS09040 PF03707 Bacterial signalling protein N terminal repeat AMYT_RS09040 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS09055 PF01161 Phosphatidylethanolamine-binding protein AMYT_RS09070 PF01867 CRISPR associated protein Cas1 AMYT_RS09075 PF09827 CRISPR associated protein Cas2 AMYT_RS09090 PF00106 short chain dehydrogenase AMYT_RS09095 PF00563 EAL domain AMYT_RS09095 PF12792 CSS motif domain associated with EAL AMYT_RS09100 PF03553 Na+/H+ antiporter family AMYT_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS09105 PF12911 N-terminal TM domain of oligopeptide transport permease C AMYT_RS09120 PF12072 Domain of unknown function (DUF3552) AMYT_RS09120 PF01966 HD domain AMYT_RS09120 PF00013 KH domain AMYT_RS09130 PF00578 AhpC/TSA family AMYT_RS09135 PF00448 SRP54-type protein, GTPase domain AMYT_RS09145 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS09145 PF00072 Response regulator receiver domain AMYT_RS09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09150 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS09155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMYT_RS09160 PF05728 Uncharacterised protein family (UPF0227) AMYT_RS09175 PF04237 YjbR AMYT_RS09180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMYT_RS09180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMYT_RS09185 PF18073 Rubredoxin metal binding domain AMYT_RS09190 PF02130 Uncharacterized protein family UPF0054 AMYT_RS09195 PF01699 Sodium/calcium exchanger protein AMYT_RS09205 PF00210 Ferritin-like domain AMYT_RS09210 PF02915 Rubrerythrin AMYT_RS09225 PF03023 Lipid II flippase MurJ AMYT_RS09230 PF00664 ABC transporter transmembrane region AMYT_RS09230 PF00005 ABC transporter AMYT_RS09235 PF01180 Dihydroorotate dehydrogenase AMYT_RS09245 PF00701 Dihydrodipicolinate synthetase family AMYT_RS09255 PF01066 CDP-alcohol phosphatidyltransferase AMYT_RS09260 PF02163 Peptidase family M50 AMYT_RS09260 PF17820 PDZ domain AMYT_RS09265 PF01168 Alanine racemase, N-terminal domain AMYT_RS09290 PF08443 RimK-like ATP-grasp domain AMYT_RS09290 PF18030 RimK PreATP-grasp domain AMYT_RS09295 PF00218 Indole-3-glycerol phosphate synthase AMYT_RS09305 PF03692 Putative zinc- or iron-chelating domain AMYT_RS09310 PF05175 Methyltransferase small domain AMYT_RS09320 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMYT_RS09320 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMYT_RS09320 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMYT_RS09325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMYT_RS09335 PF13291 ACT domain AMYT_RS09335 PF02824 TGS domain AMYT_RS09335 PF04607 Region found in RelA / SpoT proteins AMYT_RS09340 PF00929 Exonuclease AMYT_RS09340 PF02811 PHP domain AMYT_RS09340 PF14579 Helix-hairpin-helix motif AMYT_RS09340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMYT_RS09340 PF11490 DNA polymerase III polC-type N-terminus II AMYT_RS09340 PF14480 DNA polymerase III polC-type N-terminus I AMYT_RS09340 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMYT_RS09345 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMYT_RS09350 PF00072 Response regulator receiver domain AMYT_RS09355 PF00834 Ribulose-phosphate 3 epimerase family AMYT_RS09360 PF02470 MlaD protein AMYT_RS09365 PF04403 Paraquat-inducible protein A AMYT_RS09375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMYT_RS09380 PF00873 AcrB/AcrD/AcrF family AMYT_RS09390 PF02253 Phospholipase A1 AMYT_RS09405 PF00005 ABC transporter AMYT_RS09405 PF00664 ABC transporter transmembrane region AMYT_RS09405 PF03412 Peptidase C39 family AMYT_RS09410 PF02321 Outer membrane efflux protein AMYT_RS09465 PF01022 Bacterial regulatory protein, arsR family AMYT_RS09470 PF00403 Heavy-metal-associated domain AMYT_RS09475 PF00293 NUDIX domain AMYT_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09490 PF00072 Response regulator receiver domain AMYT_RS09490 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS09495 PF13247 4Fe-4S dicluster domain AMYT_RS09500 PF01568 Molydopterin dinucleotide binding domain AMYT_RS09500 PF00384 Molybdopterin oxidoreductase AMYT_RS09500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS09500 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMYT_RS09505 PF03601 Conserved hypothetical protein 698 AMYT_RS09510 PF03466 LysR substrate binding domain AMYT_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS09520 PF04461 Protein of unknown function (DUF520) AMYT_RS09525 PF13493 Domain of unknown function (DUF4118) AMYT_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09525 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS09525 PF02702 Osmosensitive K+ channel His kinase sensor domain AMYT_RS09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09530 PF08448 PAS fold AMYT_RS09530 PF08447 PAS fold AMYT_RS09540 PF00860 Permease family AMYT_RS09555 PF04241 Protein of unknown function (DUF423) AMYT_RS09565 PF00156 Phosphoribosyl transferase domain AMYT_RS09570 PF00860 Permease family AMYT_RS09580 PF00155 Aminotransferase class I and II AMYT_RS09585 PF12833 Helix-turn-helix domain AMYT_RS09590 PF11849 Domain of unknown function (DUF3369) AMYT_RS09600 PF01022 Bacterial regulatory protein, arsR family AMYT_RS09605 PF00403 Heavy-metal-associated domain AMYT_RS09610 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMYT_RS09620 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS09620 PF00072 Response regulator receiver domain AMYT_RS09630 PF00384 Molybdopterin oxidoreductase AMYT_RS09630 PF18364 Molybdopterin oxidoreductase N-terminal domain AMYT_RS09630 PF01568 Molydopterin dinucleotide binding domain AMYT_RS09635 PF12833 Helix-turn-helix domain AMYT_RS09635 PF06719 AraC-type transcriptional regulator N-terminus AMYT_RS09640 PF00465 Iron-containing alcohol dehydrogenase AMYT_RS09665 PF13673 Acetyltransferase (GNAT) domain AMYT_RS09690 PF04055 Radical SAM superfamily AMYT_RS09695 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMYT_RS09705 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMYT_RS09705 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMYT_RS09710 PF00521 DNA gyrase/topoisomerase IV, subunit A AMYT_RS09710 PF03989 DNA gyrase C-terminal domain, beta-propeller AMYT_RS09720 PF01960 ArgJ family AMYT_RS09730 PF00830 Ribosomal L28 family AMYT_RS09740 PF13580 SIS domain AMYT_RS09745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMYT_RS09775 PF00884 Sulfatase AMYT_RS09785 PF00534 Glycosyl transferases group 1 AMYT_RS09785 PF13439 Glycosyltransferase Family 4 AMYT_RS09790 PF00535 Glycosyl transferase family 2 AMYT_RS09800 PF00534 Glycosyl transferases group 1 AMYT_RS09800 PF13439 Glycosyltransferase Family 4 AMYT_RS09825 PF01219 Prokaryotic diacylglycerol kinase AMYT_RS09835 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMYT_RS09845 PF00037 4Fe-4S binding domain AMYT_RS09855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMYT_RS09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMYT_RS09860 PF01645 Conserved region in glutamate synthase AMYT_RS09860 PF01493 GXGXG motif AMYT_RS09860 PF04898 Glutamate synthase central domain AMYT_RS09860 PF00310 Glutamine amidotransferases class-II AMYT_RS09865 PF03480 Bacterial extracellular solute-binding protein, family 7 AMYT_RS09875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMYT_RS09880 PF08447 PAS fold AMYT_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09880 PF08448 PAS fold AMYT_RS09885 PF00072 Response regulator receiver domain AMYT_RS09885 PF12833 Helix-turn-helix domain AMYT_RS09900 PF00962 Adenosine/AMP deaminase AMYT_RS09905 PF13286 Phosphohydrolase-associated domain AMYT_RS09905 PF01966 HD domain AMYT_RS09915 PF01361 Tautomerase enzyme AMYT_RS09925 PF03466 LysR substrate binding domain AMYT_RS09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMYT_RS09930 PF00270 DEAD/DEAH box helicase AMYT_RS09930 PF00271 Helicase conserved C-terminal domain AMYT_RS09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS09955 PF07568 Histidine kinase AMYT_RS09955 PF12282 Signal transduction histidine kinase AMYT_RS09960 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS09960 PF00072 Response regulator receiver domain AMYT_RS10010 PF00989 PAS fold AMYT_RS10010 PF00672 HAMP domain AMYT_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS10010 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS10055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMYT_RS10060 PF01029 NusB family AMYT_RS10065 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMYT_RS10070 PF00793 DAHP synthetase I family AMYT_RS10095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMYT_RS10110 PF00263 Bacterial type II and III secretion system protein AMYT_RS10110 PF03958 Bacterial type II/III secretion system short domain AMYT_RS10115 PF01205 Uncharacterized protein family UPF0029 AMYT_RS10115 PF09186 Domain of unknown function (DUF1949) AMYT_RS10120 PF01479 S4 domain AMYT_RS10120 PF01728 FtsJ-like methyltransferase AMYT_RS10130 PF00872 Transposase, Mutator family AMYT_RS10135 PF00672 HAMP domain AMYT_RS10135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS10135 PF02203 Tar ligand binding domain homologue AMYT_RS10140 PF13649 Methyltransferase domain AMYT_RS10145 PF00578 AhpC/TSA family AMYT_RS10155 PF01565 FAD binding domain AMYT_RS10155 PF02913 FAD linked oxidases, C-terminal domain AMYT_RS10160 PF03631 Virulence factor BrkB AMYT_RS10190 PF01048 Phosphorylase superfamily AMYT_RS10195 PF00698 Acyl transferase domain AMYT_RS10200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMYT_RS10215 PF04052 TolB amino-terminal domain AMYT_RS10225 PF02472 Biopolymer transport protein ExbD/TolR AMYT_RS10230 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS10235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMYT_RS10240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMYT_RS10240 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMYT_RS10245 PF00231 ATP synthase AMYT_RS10250 PF00306 ATP synthase alpha/beta chain, C terminal domain AMYT_RS10250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMYT_RS10250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMYT_RS10255 PF00213 ATP synthase delta (OSCP) subunit AMYT_RS10260 PF00430 ATP synthase B/B' CF(0) AMYT_RS10270 PF02195 ParB-like nuclease domain AMYT_RS10270 PF17762 HTH domain found in ParB protein AMYT_RS10275 PF13614 AAA domain AMYT_RS10280 PF08279 HTH domain AMYT_RS10280 PF03099 Biotin/lipoate A/B protein ligase family AMYT_RS10280 PF02237 Biotin protein ligase C terminal domain AMYT_RS10290 PF02911 Formyl transferase, C-terminal domain AMYT_RS10290 PF00551 Formyl transferase AMYT_RS10295 PF00696 Amino acid kinase family AMYT_RS10300 PF01018 GTP1/OBG AMYT_RS10300 PF01926 50S ribosome-binding GTPase AMYT_RS10305 PF01016 Ribosomal L27 protein AMYT_RS10310 PF00829 Ribosomal prokaryotic L21 protein AMYT_RS10315 PF01042 Endoribonuclease L-PSP AMYT_RS10320 PF13662 Toprim domain AMYT_RS10320 PF08275 DNA primase catalytic core, N-terminal domain AMYT_RS10320 PF01807 CHC2 zinc finger AMYT_RS10320 PF16730 DnaG-primase C-terminal, helicase-binding domain AMYT_RS10325 PF18073 Rubredoxin metal binding domain AMYT_RS10330 PF00075 RNase H AMYT_RS10335 PF14622 Ribonuclease-III-like AMYT_RS10335 PF00035 Double-stranded RNA binding motif AMYT_RS10340 PF01264 Chorismate synthase AMYT_RS10350 PF02001 Protein of unknown function DUF134 AMYT_RS10355 PF01435 Peptidase family M48 AMYT_RS10370 PF01926 50S ribosome-binding GTPase AMYT_RS10370 PF12631 MnmE helical domain AMYT_RS10370 PF10396 GTP-binding protein TrmE N-terminus AMYT_RS10380 PF02096 60Kd inner membrane protein AMYT_RS10380 PF14849 YidC periplasmic domain AMYT_RS10385 PF01809 Putative membrane protein insertion efficiency factor AMYT_RS10390 PF00825 Ribonuclease P AMYT_RS10395 PF00468 Ribosomal protein L34 AMYT_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS10405 PF02861 Clp amino terminal domain, pathogenicity island component AMYT_RS10405 PF10431 C-terminal, D2-small domain, of ClpB protein AMYT_RS10405 PF07724 AAA domain (Cdc48 subfamily) AMYT_RS10405 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS10405 PF17871 AAA lid domain AMYT_RS10410 PF02702 Osmosensitive K+ channel His kinase sensor domain AMYT_RS10410 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS10410 PF13493 Domain of unknown function (DUF4118) AMYT_RS10420 PF01351 Ribonuclease HII AMYT_RS10430 PF08495 FIST N domain AMYT_RS10430 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS10430 PF10442 FIST C domain AMYT_RS10430 PF00563 EAL domain AMYT_RS10440 PF01641 SelR domain AMYT_RS10440 PF01625 Peptide methionine sulfoxide reductase AMYT_RS10445 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMYT_RS10455 PF00202 Aminotransferase class-III AMYT_RS10465 PF02142 MGS-like domain AMYT_RS10465 PF01808 AICARFT/IMPCHase bienzyme AMYT_RS10470 PF00586 AIR synthase related protein, N-terminal domain AMYT_RS10470 PF02769 AIR synthase related protein, C-terminal domain AMYT_RS10470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMYT_RS10480 PF08525 Opacity-associated protein A N-terminal motif AMYT_RS10480 PF01476 LysM domain AMYT_RS10480 PF01551 Peptidase family M23 AMYT_RS10485 PF03448 MgtE intracellular N domain AMYT_RS10485 PF01769 Divalent cation transporter AMYT_RS10485 PF00571 CBS domain AMYT_RS10495 PF01227 GTP cyclohydrolase I AMYT_RS10505 PF00437 Type II/IV secretion system protein AMYT_RS10520 PF00875 DNA photolyase AMYT_RS10520 PF03441 FAD binding domain of DNA photolyase AMYT_RS10535 PF00474 Sodium:solute symporter family AMYT_RS10540 PF08543 Phosphomethylpyrimidine kinase AMYT_RS10545 PF04397 LytTr DNA-binding domain AMYT_RS10545 PF00072 Response regulator receiver domain AMYT_RS10550 PF06580 Histidine kinase AMYT_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS10550 PF07694 5TMR of 5TMR-LYT AMYT_RS10565 PF07650 KH domain AMYT_RS10565 PF01926 50S ribosome-binding GTPase AMYT_RS10570 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMYT_RS10570 PF01078 Magnesium chelatase, subunit ChlI AMYT_RS10575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS10575 PF00672 HAMP domain AMYT_RS10575 PF02203 Tar ligand binding domain homologue AMYT_RS10585 PF01327 Polypeptide deformylase AMYT_RS10590 PF00574 Clp protease AMYT_RS10595 PF05698 Bacterial trigger factor protein (TF) C-terminus AMYT_RS10595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMYT_RS10595 PF05697 Bacterial trigger factor protein (TF) AMYT_RS10600 PF13519 von Willebrand factor type A domain AMYT_RS10615 PF03976 Polyphosphate kinase 2 (PPK2) AMYT_RS10620 PF03976 Polyphosphate kinase 2 (PPK2) AMYT_RS10625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMYT_RS10630 PF00301 Rubredoxin AMYT_RS10635 PF16653 Saccharopine dehydrogenase C-terminal domain AMYT_RS10635 PF03435 Saccharopine dehydrogenase NADP binding domain AMYT_RS10660 PF01769 Divalent cation transporter AMYT_RS10660 PF03448 MgtE intracellular N domain AMYT_RS10660 PF00571 CBS domain AMYT_RS10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS10670 PF02203 Tar ligand binding domain homologue AMYT_RS10670 PF00672 HAMP domain AMYT_RS10680 PF00924 Mechanosensitive ion channel AMYT_RS10705 PF00005 ABC transporter AMYT_RS10710 PF13237 4Fe-4S dicluster domain AMYT_RS10710 PF12801 4Fe-4S binding domain AMYT_RS10725 PF12838 4Fe-4S dicluster domain AMYT_RS10740 PF18793 Nitrous oxide reductase propeller repeat 2 AMYT_RS10740 PF18764 Nitrous oxide reductase propeller repeat AMYT_RS10740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMYT_RS10750 PF17203 Single cache domain 3 AMYT_RS10750 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMYT_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS10780 PF00258 Flavodoxin AMYT_RS10785 PF00258 Flavodoxin AMYT_RS10790 PF00258 Flavodoxin AMYT_RS10795 PF01475 Ferric uptake regulator family AMYT_RS10835 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS10845 PF02421 Ferrous iron transport protein B AMYT_RS10845 PF07670 Nucleoside recognition AMYT_RS10845 PF07664 Ferrous iron transport protein B C terminus AMYT_RS10850 PF01475 Ferric uptake regulator family AMYT_RS10870 PF04377 Arginine-tRNA-protein transferase, C terminus AMYT_RS10870 PF04376 Arginine-tRNA-protein transferase, N terminus AMYT_RS10875 PF00290 Tryptophan synthase alpha chain AMYT_RS10880 PF02548 Ketopantoate hydroxymethyltransferase AMYT_RS10885 PF05491 RuvB C-terminal winged helix domain AMYT_RS10885 PF17864 RuvB AAA lid domain AMYT_RS10885 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMYT_RS10890 PF01594 AI-2E family transporter AMYT_RS10895 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS10895 PF00072 Response regulator receiver domain AMYT_RS10905 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMYT_RS10910 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS10910 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS10920 PF10431 C-terminal, D2-small domain, of ClpB protein AMYT_RS10920 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS10920 PF02861 Clp amino terminal domain, pathogenicity island component AMYT_RS10920 PF17871 AAA lid domain AMYT_RS10920 PF07724 AAA domain (Cdc48 subfamily) AMYT_RS10925 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMYT_RS10935 PF00672 HAMP domain AMYT_RS10935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS10935 PF17200 Single Cache domain 2 AMYT_RS10945 PF01568 Molydopterin dinucleotide binding domain AMYT_RS10945 PF18364 Molybdopterin oxidoreductase N-terminal domain AMYT_RS10945 PF00384 Molybdopterin oxidoreductase AMYT_RS10965 PF00771 FHIPEP family AMYT_RS10975 PF18269 T3SS EscN ATPase C-terminal domain AMYT_RS10975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMYT_RS10985 PF01312 FlhB HrpN YscU SpaS Family AMYT_RS11000 PF00460 Flagella basal body rod protein AMYT_RS11000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS11005 PF02049 Flagellar hook-basal body complex protein FliE AMYT_RS11015 PF10609 NUBPL iron-transfer P-loop NTPase AMYT_RS11020 PF00448 SRP54-type protein, GTPase domain AMYT_RS11045 PF01618 MotA/TolQ/ExbB proton channel family AMYT_RS11050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMYT_RS11050 PF04509 CheC-like family AMYT_RS11070 PF07196 Flagellin hook IN motif AMYT_RS11070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS11070 PF07559 Flagellar basal body protein FlaE AMYT_RS11070 PF00460 Flagella basal body rod protein AMYT_RS11075 PF07559 Flagellar basal body protein FlaE AMYT_RS11075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS11075 PF00460 Flagella basal body rod protein AMYT_RS11085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMYT_RS11095 PF01706 FliG C-terminal domain AMYT_RS11095 PF14841 FliG middle domain AMYT_RS11095 PF14842 FliG N-terminal domain AMYT_RS11100 PF08345 Flagellar M-ring protein C-terminal AMYT_RS11100 PF01514 Secretory protein of YscJ/FliF family AMYT_RS11105 PF00460 Flagella basal body rod protein AMYT_RS11110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS11110 PF00460 Flagella basal body rod protein AMYT_RS11120 PF00072 Response regulator receiver domain AMYT_RS11125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS11125 PF00460 Flagella basal body rod protein AMYT_RS11140 PF01782 RimM N-terminal domain AMYT_RS11150 PF00886 Ribosomal protein S16 AMYT_RS11155 PF00448 SRP54-type protein, GTPase domain AMYT_RS11155 PF02978 Signal peptide binding domain AMYT_RS11155 PF02881 SRP54-type protein, helical bundle domain AMYT_RS11160 PF00849 RNA pseudouridylate synthase AMYT_RS11165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMYT_RS11175 PF01784 NIF3 (NGG1p interacting factor 3) AMYT_RS11180 PF02091 Glycyl-tRNA synthetase alpha subunit AMYT_RS11190 PF00731 AIR carboxylase AMYT_RS11200 PF01136 Peptidase family U32 AMYT_RS11205 PF17200 Single Cache domain 2 AMYT_RS11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS11205 PF00672 HAMP domain AMYT_RS11215 PF13476 AAA domain AMYT_RS11220 PF01513 ATP-NAD kinase AMYT_RS11225 PF00009 Elongation factor Tu GTP binding domain AMYT_RS11225 PF00679 Elongation factor G C-terminus AMYT_RS11225 PF14492 Elongation Factor G, domain II AMYT_RS11225 PF03764 Elongation factor G, domain IV AMYT_RS11225 PF03144 Elongation factor Tu domain 2 AMYT_RS11230 PF00177 Ribosomal protein S7p/S5e AMYT_RS11235 PF00164 Ribosomal protein S12/S23 AMYT_RS11240 PF07690 Major Facilitator Superfamily AMYT_RS11265 PF00005 ABC transporter AMYT_RS11280 PF01891 Cobalt uptake substrate-specific transmembrane region AMYT_RS11290 PF00313 'Cold-shock' DNA-binding domain AMYT_RS11300 PF03458 UPF0126 domain AMYT_RS11315 PF03062 MBOAT, membrane-bound O-acyltransferase family AMYT_RS11325 PF00535 Glycosyl transferase family 2 AMYT_RS11335 PF02719 Polysaccharide biosynthesis protein AMYT_RS11340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMYT_RS11340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMYT_RS11340 PF01842 ACT domain AMYT_RS11345 PF04055 Radical SAM superfamily AMYT_RS11345 PF02310 B12 binding domain AMYT_RS11350 PF02780 Transketolase, C-terminal domain AMYT_RS11350 PF02779 Transketolase, pyrimidine binding domain AMYT_RS11355 PF00456 Transketolase, thiamine diphosphate binding domain AMYT_RS11365 PF00067 Cytochrome P450 AMYT_RS11370 PF02543 Carbamoyltransferase N-terminus AMYT_RS11370 PF16861 Carbamoyltransferase C-terminus AMYT_RS11375 PF03062 MBOAT, membrane-bound O-acyltransferase family AMYT_RS11390 PF13356 Arm DNA-binding domain AMYT_RS11390 PF00589 Phage integrase family AMYT_RS11410 PF04983 RNA polymerase Rpb1, domain 3 AMYT_RS11410 PF00623 RNA polymerase Rpb1, domain 2 AMYT_RS11410 PF04997 RNA polymerase Rpb1, domain 1 AMYT_RS11410 PF05000 RNA polymerase Rpb1, domain 4 AMYT_RS11410 PF04998 RNA polymerase Rpb1, domain 5 AMYT_RS11415 PF04565 RNA polymerase Rpb2, domain 3 AMYT_RS11415 PF04561 RNA polymerase Rpb2, domain 2 AMYT_RS11415 PF04563 RNA polymerase beta subunit AMYT_RS11415 PF00562 RNA polymerase Rpb2, domain 6 AMYT_RS11415 PF04560 RNA polymerase Rpb2, domain 7 AMYT_RS11415 PF10385 RNA polymerase beta subunit external 1 domain AMYT_RS11420 PF00542 Ribosomal protein L7/L12 C-terminal domain AMYT_RS11420 PF16320 Ribosomal protein L7/L12 dimerisation domain AMYT_RS11425 PF00466 Ribosomal protein L10 AMYT_RS11430 PF00687 Ribosomal protein L1p/L10e family AMYT_RS11435 PF03946 Ribosomal protein L11, N-terminal domain AMYT_RS11435 PF00298 Ribosomal protein L11, RNA binding domain AMYT_RS11440 PF02357 Transcription termination factor nusG AMYT_RS11455 PF00471 Ribosomal protein L33 AMYT_RS11460 PF03144 Elongation factor Tu domain 2 AMYT_RS11460 PF03143 Elongation factor Tu C-terminal domain AMYT_RS11460 PF00009 Elongation factor Tu GTP binding domain AMYT_RS11485 PF08245 Mur ligase middle domain AMYT_RS11490 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMYT_RS11490 PF00953 Glycosyl transferase family 4 AMYT_RS11495 PF01676 Metalloenzyme superfamily AMYT_RS11495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMYT_RS11500 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS11500 PF00072 Response regulator receiver domain AMYT_RS11505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMYT_RS11505 PF00005 ABC transporter AMYT_RS11510 PF00905 Penicillin binding protein transpeptidase domain AMYT_RS11510 PF00912 Transglycosylase AMYT_RS11515 PF03951 Glutamine synthetase, beta-Grasp domain AMYT_RS11515 PF00120 Glutamine synthetase, catalytic domain AMYT_RS11525 PF00072 Response regulator receiver domain AMYT_RS11525 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS11530 PF02391 MoaE protein AMYT_RS11540 PF02621 Menaquinone biosynthesis AMYT_RS11545 PF02673 Bacitracin resistance protein BacA AMYT_RS11550 PF04101 Glycosyltransferase family 28 C-terminal domain AMYT_RS11550 PF03033 Glycosyltransferase family 28 N-terminal domain AMYT_RS11555 PF01098 Cell cycle protein AMYT_RS11560 PF03717 Penicillin-binding Protein dimerisation domain AMYT_RS11560 PF00905 Penicillin binding protein transpeptidase domain AMYT_RS11565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMYT_RS11605 PF00117 Glutamine amidotransferase class-I AMYT_RS11620 PF13416 Bacterial extracellular solute-binding protein AMYT_RS11630 PF08402 TOBE domain AMYT_RS11630 PF00005 ABC transporter AMYT_RS11635 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMYT_RS11640 PF00155 Aminotransferase class I and II AMYT_RS11645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMYT_RS11650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMYT_RS11655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMYT_RS11655 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMYT_RS11665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMYT_RS11665 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMYT_RS11665 PF10531 SLBB domain AMYT_RS11670 PF00285 Citrate synthase, C-terminal domain AMYT_RS11675 PF00384 Molybdopterin oxidoreductase AMYT_RS11675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMYT_RS11675 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMYT_RS11680 PF00146 NADH dehydrogenase AMYT_RS11685 PF12838 4Fe-4S dicluster domain AMYT_RS11690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMYT_RS11695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMYT_RS11700 PF00361 Proton-conducting membrane transporter AMYT_RS11700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMYT_RS11705 PF00361 Proton-conducting membrane transporter AMYT_RS11705 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMYT_RS11710 PF00361 Proton-conducting membrane transporter AMYT_RS11715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMYT_RS11720 PF02910 Fumarate reductase flavoprotein C-term AMYT_RS11720 PF00890 FAD binding domain AMYT_RS11725 PF13183 4Fe-4S dicluster domain AMYT_RS11725 PF13085 2Fe-2S iron-sulfur cluster binding domain AMYT_RS11730 PF00350 Dynamin family AMYT_RS11735 PF00350 Dynamin family AMYT_RS11740 PF02595 Glycerate kinase family AMYT_RS11755 PF00654 Voltage gated chloride channel AMYT_RS11760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMYT_RS11760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMYT_RS11765 PF01863 Protein of unknown function DUF45 AMYT_RS11770 PF00205 Thiamine pyrophosphate enzyme, central domain AMYT_RS11770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMYT_RS11770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMYT_RS11775 PF00171 Aldehyde dehydrogenase family AMYT_RS11785 PF00549 CoA-ligase AMYT_RS11785 PF08442 ATP-grasp domain AMYT_RS11790 PF00549 CoA-ligase AMYT_RS11790 PF02629 CoA binding domain AMYT_RS11795 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AMYT_RS11805 PF00293 NUDIX domain AMYT_RS11805 PF13344 Haloacid dehalogenase-like hydrolase AMYT_RS11810 PF01810 LysE type translocator AMYT_RS11815 PF01914 MarC family integral membrane protein AMYT_RS11820 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS11825 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMYT_RS11830 PF00005 ABC transporter AMYT_RS11840 PF05958 tRNA (Uracil-5-)-methyltransferase AMYT_RS11845 PF01758 Sodium Bile acid symporter family AMYT_RS11850 PF00857 Isochorismatase family AMYT_RS11870 PF00186 Dihydrofolate reductase AMYT_RS11875 PF00303 Thymidylate synthase AMYT_RS11890 PF00285 Citrate synthase, C-terminal domain AMYT_RS11895 PF00694 Aconitase C-terminal domain AMYT_RS11895 PF00330 Aconitase family (aconitate hydratase) AMYT_RS11900 PF04303 PrpF protein AMYT_RS11910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMYT_RS11910 PF03900 Porphobilinogen deaminase, C-terminal domain AMYT_RS11920 PF12170 DNA polymerase III tau subunit V interacting with alpha AMYT_RS11920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMYT_RS11920 PF12169 DNA polymerase III subunits gamma and tau domain III AMYT_RS11925 PF01177 Asp/Glu/Hydantoin racemase AMYT_RS11935 PF07498 Rho termination factor, N-terminal domain AMYT_RS11935 PF07497 Rho termination factor, RNA-binding domain AMYT_RS11935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMYT_RS11940 PF00578 AhpC/TSA family AMYT_RS11940 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMYT_RS11945 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMYT_RS11945 PF02772 S-adenosylmethionine synthetase, central domain AMYT_RS11945 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMYT_RS11950 PF00037 4Fe-4S binding domain AMYT_RS11955 PF00334 Nucleoside diphosphate kinase AMYT_RS11965 PF01783 Ribosomal L32p protein family AMYT_RS11970 PF02504 Fatty acid synthesis protein AMYT_RS11975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMYT_RS11975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMYT_RS11985 PF05437 Branched-chain amino acid transport protein (AzlD) AMYT_RS11990 PF03591 AzlC protein AMYT_RS12005 PF01063 Amino-transferase class IV AMYT_RS12020 PF00425 chorismate binding enzyme AMYT_RS12025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMYT_RS12025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMYT_RS12030 PF00202 Aminotransferase class-III AMYT_RS12040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMYT_RS12040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMYT_RS12045 PF02887 Pyruvate kinase, alpha/beta domain AMYT_RS12045 PF00224 Pyruvate kinase, barrel domain AMYT_RS12045 PF00391 PEP-utilising enzyme, mobile domain AMYT_RS12060 PF00171 Aldehyde dehydrogenase family AMYT_RS12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12070 PF00072 Response regulator receiver domain AMYT_RS12070 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS12075 PF02597 ThiS family AMYT_RS12080 PF02021 Uncharacterised protein family UPF0102 AMYT_RS12090 PF02203 Tar ligand binding domain homologue AMYT_RS12090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS12090 PF00672 HAMP domain AMYT_RS12095 PF06779 Uncharacterised MFS-type transporter YbfB AMYT_RS12100 PF00672 HAMP domain AMYT_RS12100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS12100 PF02203 Tar ligand binding domain homologue AMYT_RS12105 PF00672 HAMP domain AMYT_RS12105 PF02203 Tar ligand binding domain homologue AMYT_RS12105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS12110 PF00155 Aminotransferase class I and II AMYT_RS12120 PF00484 Carbonic anhydrase AMYT_RS12130 PF04055 Radical SAM superfamily AMYT_RS12140 PF04028 Domain of unknown function (DUF374) AMYT_RS12145 PF01938 TRAM domain AMYT_RS12145 PF00919 Uncharacterized protein family UPF0004 AMYT_RS12145 PF04055 Radical SAM superfamily AMYT_RS12155 PF08529 NusA N-terminal domain AMYT_RS12155 PF13184 NusA-like KH domain AMYT_RS12160 PF01406 tRNA synthetases class I (C) catalytic domain AMYT_RS12160 PF09190 DALR domain AMYT_RS12165 PF01084 Ribosomal protein S18 AMYT_RS12170 PF00436 Single-strand binding protein family AMYT_RS12175 PF01250 Ribosomal protein S6 AMYT_RS12180 PF06144 DNA polymerase III, delta subunit AMYT_RS12185 PF02623 FliW protein AMYT_RS12190 PF00773 RNB domain AMYT_RS12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12200 PF00989 PAS fold AMYT_RS12200 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMYT_RS12205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMYT_RS12210 PF04748 Divergent polysaccharide deacetylase AMYT_RS12220 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS12220 PF00593 TonB dependent receptor AMYT_RS12235 PF00005 ABC transporter AMYT_RS12240 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS12250 PF06965 Na+/H+ antiporter 1 AMYT_RS12265 PF06965 Na+/H+ antiporter 1 AMYT_RS12270 PF01225 Mur ligase family, catalytic domain AMYT_RS12270 PF02875 Mur ligase family, glutamate ligase domain AMYT_RS12270 PF08245 Mur ligase middle domain AMYT_RS12280 PF00155 Aminotransferase class I and II AMYT_RS12290 PF01702 Queuine tRNA-ribosyltransferase AMYT_RS12295 PF00563 EAL domain AMYT_RS12295 PF00360 Phytochrome region AMYT_RS12295 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS12295 PF01590 GAF domain AMYT_RS12300 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMYT_RS12300 PF00753 Metallo-beta-lactamase superfamily AMYT_RS12305 PF02686 Glu-tRNAGln amidotransferase C subunit AMYT_RS12310 PF03960 ArsC family AMYT_RS12315 PF01474 Class-II DAHP synthetase family AMYT_RS12320 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMYT_RS12330 PF02219 Methylenetetrahydrofolate reductase AMYT_RS12330 PF02574 Homocysteine S-methyltransferase AMYT_RS12335 PF03652 Holliday junction resolvase AMYT_RS12340 PF01648 4'-phosphopantetheinyl transferase superfamily AMYT_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component AMYT_RS12350 PF02569 Pantoate-beta-alanine ligase AMYT_RS12360 PF00919 Uncharacterized protein family UPF0004 AMYT_RS12360 PF04055 Radical SAM superfamily AMYT_RS12360 PF18693 TRAM domain AMYT_RS12365 PF01171 PP-loop family AMYT_RS12375 PF02561 Flagellar protein FliS AMYT_RS12380 PF07195 Flagellar hook-associated protein 2 C-terminus AMYT_RS12380 PF02465 Flagellar hook-associated protein 2 N-terminus AMYT_RS12385 PF00460 Flagella basal body rod protein AMYT_RS12385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMYT_RS12390 PF02107 Flagellar L-ring protein AMYT_RS12415 PF01313 Bacterial export proteins, family 3 AMYT_RS12425 PF02119 Flagellar P-ring protein AMYT_RS12430 PF02154 Flagellar motor switch protein FliM AMYT_RS12430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMYT_RS12440 PF00543 Nitrogen regulatory protein P-II AMYT_RS12445 PF00909 Ammonium Transporter Family AMYT_RS12450 PF00543 Nitrogen regulatory protein P-II AMYT_RS12455 PF00909 Ammonium Transporter Family AMYT_RS12470 PF08335 GlnD PII-uridylyltransferase AMYT_RS12470 PF01966 HD domain AMYT_RS12470 PF01909 Nucleotidyltransferase domain AMYT_RS12470 PF01842 ACT domain AMYT_RS12475 PF01553 Acyltransferase AMYT_RS12475 PF00501 AMP-binding enzyme AMYT_RS12475 PF13193 AMP-binding enzyme C-terminal domain AMYT_RS12480 PF00916 Sulfate permease family AMYT_RS12480 PF01740 STAS domain AMYT_RS12490 PF00892 EamA-like transporter family AMYT_RS12505 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMYT_RS12510 PF02659 Putative manganese efflux pump AMYT_RS12515 PF02040 Arsenical pump membrane protein AMYT_RS12530 PF07715 TonB-dependent Receptor Plug Domain AMYT_RS12530 PF00593 TonB dependent receptor AMYT_RS12535 PF00571 CBS domain AMYT_RS12535 PF01595 Cyclin M transmembrane N-terminal domain AMYT_RS12540 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS12540 PF00072 Response regulator receiver domain AMYT_RS12545 PF04172 LrgB-like family AMYT_RS12550 PF03788 LrgA family AMYT_RS12555 PF08348 YheO-like PAS domain AMYT_RS12555 PF13309 HTH domain AMYT_RS12560 PF00375 Sodium:dicarboxylate symporter family AMYT_RS12565 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS12565 PF00072 Response regulator receiver domain AMYT_RS12570 PF00989 PAS fold AMYT_RS12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12570 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12570 PF00672 HAMP domain AMYT_RS12575 PF00710 Asparaginase, N-terminal AMYT_RS12575 PF17763 Glutaminase/Asparaginase C-terminal domain AMYT_RS12580 PF03605 Anaerobic c4-dicarboxylate membrane transporter AMYT_RS12585 PF00206 Lyase AMYT_RS12585 PF10415 Fumarase C C-terminus AMYT_RS12590 PF13183 4Fe-4S dicluster domain AMYT_RS12590 PF13085 2Fe-2S iron-sulfur cluster binding domain AMYT_RS12595 PF02910 Fumarate reductase flavoprotein C-term AMYT_RS12595 PF00890 FAD binding domain AMYT_RS12600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMYT_RS12605 PF02780 Transketolase, C-terminal domain AMYT_RS12605 PF00456 Transketolase, thiamine diphosphate binding domain AMYT_RS12605 PF02779 Transketolase, pyrimidine binding domain AMYT_RS12630 PF00529 HlyD membrane-fusion protein of T1SS AMYT_RS12635 PF00005 ABC transporter AMYT_RS12635 PF03412 Peptidase C39 family AMYT_RS12635 PF00664 ABC transporter transmembrane region AMYT_RS12640 PF06725 3D domain AMYT_RS12640 PF01476 LysM domain AMYT_RS12645 PF00072 Response regulator receiver domain AMYT_RS12645 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS12650 PF01594 AI-2E family transporter AMYT_RS12655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS12655 PF08269 Cache domain AMYT_RS12660 PF13188 PAS domain AMYT_RS12660 PF00072 Response regulator receiver domain AMYT_RS12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12660 PF08448 PAS fold AMYT_RS12660 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12690 PF00920 Dehydratase family AMYT_RS12695 PF17820 PDZ domain AMYT_RS12695 PF13180 PDZ domain AMYT_RS12700 PF00072 Response regulator receiver domain AMYT_RS12700 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS12715 PF03186 CobD/Cbib protein AMYT_RS12720 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMYT_RS12720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMYT_RS12735 PF00155 Aminotransferase class I and II AMYT_RS12740 PF02654 Cobalamin-5-phosphate synthase AMYT_RS12750 PF01914 MarC family integral membrane protein AMYT_RS12755 PF02277 Phosphoribosyltransferase AMYT_RS12765 PF00072 Response regulator receiver domain AMYT_RS12765 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS12770 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12770 PF08447 PAS fold AMYT_RS12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12770 PF13426 PAS domain AMYT_RS12770 PF00989 PAS fold AMYT_RS12770 PF13493 Domain of unknown function (DUF4118) AMYT_RS12775 PF00939 Sodium:sulfate symporter transmembrane region AMYT_RS12780 PF11412 Disulphide bond corrector protein DsbC AMYT_RS12780 PF02683 Cytochrome C biogenesis protein transmembrane region AMYT_RS12785 PF00085 Thioredoxin AMYT_RS12805 PF02666 Phosphatidylserine decarboxylase AMYT_RS12815 PF07670 Nucleoside recognition AMYT_RS12830 PF00012 Hsp70 protein AMYT_RS12835 PF01025 GrpE AMYT_RS12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12855 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12855 PF00989 PAS fold AMYT_RS12855 PF08447 PAS fold AMYT_RS12865 PF16868 NMT1-like family AMYT_RS12875 PF12833 Helix-turn-helix domain AMYT_RS12875 PF00072 Response regulator receiver domain AMYT_RS12880 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS12885 PF01416 tRNA pseudouridine synthase AMYT_RS12895 PF06750 Bacterial Peptidase A24 N-terminal domain AMYT_RS12895 PF01478 Type IV leader peptidase family AMYT_RS12900 PF01255 Putative undecaprenyl diphosphate synthase AMYT_RS12905 PF02441 Flavoprotein AMYT_RS12905 PF04127 DNA / pantothenate metabolism flavoprotein AMYT_RS12910 PF14602 Hexapeptide repeat of succinyl-transferase AMYT_RS12910 PF12804 MobA-like NTP transferase domain AMYT_RS12915 PF12796 Ankyrin repeats (3 copies) AMYT_RS12920 PF00270 DEAD/DEAH box helicase AMYT_RS12920 PF08148 DSHCT (NUC185) domain AMYT_RS12920 PF00271 Helicase conserved C-terminal domain AMYT_RS12925 PF05958 tRNA (Uracil-5-)-methyltransferase AMYT_RS12930 PF07196 Flagellin hook IN motif AMYT_RS12930 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS12930 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS12940 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS12940 PF07196 Flagellin hook IN motif AMYT_RS12940 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS12945 PF00700 Bacterial flagellin C-terminal helical region AMYT_RS12945 PF07196 Flagellin hook IN motif AMYT_RS12945 PF00669 Bacterial flagellin N-terminal helical region AMYT_RS12955 PF00483 Nucleotidyl transferase AMYT_RS12955 PF01050 Mannose-6-phosphate isomerase AMYT_RS12960 PF08666 SAF domain AMYT_RS12960 PF03102 NeuB family AMYT_RS12980 PF13580 SIS domain AMYT_RS12985 PF16363 GDP-mannose 4,6 dehydratase AMYT_RS12990 PF16363 GDP-mannose 4,6 dehydratase AMYT_RS12995 PF13649 Methyltransferase domain AMYT_RS13000 PF00676 Dehydrogenase E1 component AMYT_RS13005 PF02779 Transketolase, pyrimidine binding domain AMYT_RS13005 PF02780 Transketolase, C-terminal domain AMYT_RS13015 PF00107 Zinc-binding dehydrogenase AMYT_RS13015 PF08240 Alcohol dehydrogenase GroES-like domain AMYT_RS13020 PF01467 Cytidylyltransferase-like AMYT_RS13020 PF00294 pfkB family carbohydrate kinase AMYT_RS13025 PF00483 Nucleotidyl transferase AMYT_RS13030 PF08241 Methyltransferase domain AMYT_RS13035 PF03275 UDP-galactopyranose mutase AMYT_RS13045 PF00535 Glycosyl transferase family 2 AMYT_RS13055 PF01209 ubiE/COQ5 methyltransferase family AMYT_RS13060 PF00534 Glycosyl transferases group 1 AMYT_RS13060 PF13439 Glycosyltransferase Family 4 AMYT_RS13065 PF13537 Glutamine amidotransferase domain AMYT_RS13065 PF00733 Asparagine synthase AMYT_RS13080 PF00154 recA bacterial DNA recombination protein AMYT_RS13085 PF03952 Enolase, N-terminal domain AMYT_RS13085 PF00113 Enolase, C-terminal TIM barrel domain AMYT_RS13100 PF02254 TrkA-N domain AMYT_RS13100 PF02080 TrkA-C domain AMYT_RS13100 PF00999 Sodium/hydrogen exchanger family AMYT_RS13105 PF06968 Biotin and Thiamin Synthesis associated domain AMYT_RS13105 PF04055 Radical SAM superfamily AMYT_RS13115 PF01131 DNA topoisomerase AMYT_RS13115 PF01751 Toprim domain AMYT_RS13115 PF13368 Topoisomerase C-terminal repeat AMYT_RS13120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMYT_RS13125 PF02621 Menaquinone biosynthesis AMYT_RS13135 PF00361 Proton-conducting membrane transporter AMYT_RS13140 PF00361 Proton-conducting membrane transporter AMYT_RS13140 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMYT_RS13145 PF00361 Proton-conducting membrane transporter AMYT_RS13145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMYT_RS13150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMYT_RS13155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMYT_RS13160 PF12838 4Fe-4S dicluster domain AMYT_RS13165 PF00146 NADH dehydrogenase AMYT_RS13170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMYT_RS13170 PF01568 Molydopterin dinucleotide binding domain AMYT_RS13170 PF00384 Molybdopterin oxidoreductase AMYT_RS13170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMYT_RS13170 PF12838 4Fe-4S dicluster domain AMYT_RS13185 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMYT_RS13190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMYT_RS13195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMYT_RS13200 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMYT_RS13205 PF00004 ATPase family associated with various cellular activities (AAA) AMYT_RS13205 PF16450 Proteasomal ATPase OB C-terminal domain AMYT_RS13205 PF17758 Proteasomal ATPase OB N-terminal domain AMYT_RS13235 PF01261 Xylose isomerase-like TIM barrel AMYT_RS13240 PF08495 FIST N domain AMYT_RS13240 PF00563 EAL domain AMYT_RS13240 PF10442 FIST C domain AMYT_RS13240 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS13250 PF02677 Epoxyqueuosine reductase QueH AMYT_RS13255 PF02684 Lipid-A-disaccharide synthetase AMYT_RS13260 PF07977 FabA-like domain AMYT_RS13265 PF00132 Bacterial transferase hexapeptide (six repeats) AMYT_RS13265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMYT_RS13270 PF10431 C-terminal, D2-small domain, of ClpB protein AMYT_RS13270 PF07724 AAA domain (Cdc48 subfamily) AMYT_RS13270 PF06689 ClpX C4-type zinc finger AMYT_RS13285 PF05199 GMC oxidoreductase AMYT_RS13285 PF00732 GMC oxidoreductase AMYT_RS13295 PF00677 Lumazine binding domain AMYT_RS13300 PF01134 Glucose inhibited division protein A AMYT_RS13300 PF13932 GidA associated domain AMYT_RS13315 PF03372 Endonuclease/Exonuclease/phosphatase family AMYT_RS13320 PF01555 DNA methylase AMYT_RS13350 PF00665 Integrase core domain AMYT_RS13380 PF02583 Metal-sensitive transcriptional repressor AMYT_RS13390 PF18273 Type III R-M EcoP15I C-terminal domain AMYT_RS13390 PF01555 DNA methylase AMYT_RS13400 PF00589 Phage integrase family AMYT_RS13400 PF02899 Phage integrase, N-terminal SAM-like domain AMYT_RS13405 PF13649 Methyltransferase domain AMYT_RS13410 PF00501 AMP-binding enzyme AMYT_RS13430 PF02543 Carbamoyltransferase N-terminus AMYT_RS13430 PF16861 Carbamoyltransferase C-terminus AMYT_RS13445 PF04055 Radical SAM superfamily AMYT_RS13445 PF02310 B12 binding domain AMYT_RS13445 PF13282 Domain of unknown function (DUF4070) AMYT_RS13455 PF12801 4Fe-4S binding domain AMYT_RS13455 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMYT_RS13455 PF13746 4Fe-4S dicluster domain AMYT_RS13460 PF06418 CTP synthase N-terminus AMYT_RS13460 PF00117 Glutamine amidotransferase class-I AMYT_RS13465 PF01368 DHH family AMYT_RS13465 PF17768 RecJ OB domain AMYT_RS13465 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMYT_RS13465 PF02272 DHHA1 domain AMYT_RS13500 PF02811 PHP domain AMYT_RS13500 PF14579 Helix-hairpin-helix motif AMYT_RS13500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMYT_RS13500 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMYT_RS13505 PF01975 Survival protein SurE AMYT_RS13525 PF04359 Protein of unknown function (DUF493) AMYT_RS13530 PF01967 MoaC family AMYT_RS13535 PF01165 Ribosomal protein S21 AMYT_RS13565 PF01027 Inhibitor of apoptosis-promoting Bax1 AMYT_RS13570 PF17792 ThiD2 family AMYT_RS13570 PF02581 Thiamine monophosphate synthase AMYT_RS13580 PF03840 Preprotein translocase SecG subunit AMYT_RS13585 PF01522 Polysaccharide deacetylase AMYT_RS13590 PF01765 Ribosome recycling factor AMYT_RS13595 PF00156 Phosphoribosyl transferase domain AMYT_RS13605 PF12832 MFS_1 like family AMYT_RS13610 PF03883 Peroxide stress protein YaaA AMYT_RS13615 PF02810 SEC-C motif AMYT_RS13630 PF03167 Uracil DNA glycosylase superfamily AMYT_RS13635 PF13419 Haloacid dehalogenase-like hydrolase AMYT_RS13645 PF12802 MarR family AMYT_RS13650 PF07690 Major Facilitator Superfamily AMYT_RS13660 PF01814 Hemerythrin HHE cation binding domain AMYT_RS13680 PF01053 Cys/Met metabolism PLP-dependent enzyme AMYT_RS13685 PF02082 Transcriptional regulator AMYT_RS13690 PF00291 Pyridoxal-phosphate dependent enzyme AMYT_RS13700 PF01507 Phosphoadenosine phosphosulfate reductase family AMYT_RS13705 PF01507 Phosphoadenosine phosphosulfate reductase family AMYT_RS13710 PF00009 Elongation factor Tu GTP binding domain AMYT_RS13720 PF02347 Glycine cleavage system P-protein AMYT_RS13725 PF02203 Tar ligand binding domain homologue AMYT_RS13725 PF00672 HAMP domain AMYT_RS13725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS13730 PF00149 Calcineurin-like phosphoesterase AMYT_RS13740 PF00011 Hsp20/alpha crystallin family AMYT_RS13745 PF00009 Elongation factor Tu GTP binding domain AMYT_RS13745 PF03144 Elongation factor Tu domain 2 AMYT_RS13745 PF00679 Elongation factor G C-terminus AMYT_RS13755 PF00005 ABC transporter AMYT_RS13780 PF00149 Calcineurin-like phosphoesterase AMYT_RS13785 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS13785 PF00072 Response regulator receiver domain AMYT_RS13790 PF00512 His Kinase A (phospho-acceptor) domain AMYT_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMYT_RS13790 PF00672 HAMP domain AMYT_RS13795 PF11849 Domain of unknown function (DUF3369) AMYT_RS13800 PF00884 Sulfatase AMYT_RS13800 PF08019 Phosphoethanolamine transferase EptA/EptB AMYT_RS13805 PF01219 Prokaryotic diacylglycerol kinase AMYT_RS13810 PF04143 Sulphur transport AMYT_RS13815 PF01206 Sulfurtransferase TusA AMYT_RS13820 PF04960 Glutaminase AMYT_RS13850 PF00072 Response regulator receiver domain AMYT_RS13850 PF00486 Transcriptional regulatory protein, C terminal AMYT_RS13860 PF03458 UPF0126 domain AMYT_RS13865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMYT_RS13865 PF08447 PAS fold AMYT_RS13870 PF00551 Formyl transferase AMYT_RS13870 PF02911 Formyl transferase, C-terminal domain AMYT_RS13875 PF02075 Crossover junction endodeoxyribonuclease RuvC AMYT_RS13885 PF03837 RecT family AMYT_RS13910 PF00436 Single-strand binding protein family AMYT_RS13925 PF00712 DNA polymerase III beta subunit, N-terminal domain AMYT_RS13925 PF02768 DNA polymerase III beta subunit, C-terminal domain AMYT_RS13925 PF02767 DNA polymerase III beta subunit, central domain AMYT_RS13975 PF00145 C-5 cytosine-specific DNA methylase AMYT_RS14245 PF00580 UvrD/REP helicase N-terminal domain AMYT_RS14245 PF13361 UvrD-like helicase C-terminal domain AMYT_RS14260 PF00293 NUDIX domain AMYT_RS14305 PF00589 Phage integrase family AMYT_RS14305 PF02899 Phage integrase, N-terminal SAM-like domain AMYT_RS14365 PF00563 EAL domain AMYT_RS14365 PF00990 Diguanylate cyclase, GGDEF domain AMYT_RS14365 PF08448 PAS fold AMYT_RS14510 PF01131 DNA topoisomerase AMYT_RS14510 PF01751 Toprim domain AMYT_RS14570 PF13614 AAA domain AMYT_RS14575 PF17762 HTH domain found in ParB protein AMYT_RS14575 PF02195 ParB-like nuclease domain AMYT_RS14675 PF00772 DnaB-like helicase N terminal domain AMYT_RS14675 PF03796 DnaB-like helicase C terminal domain AMYT_RS14825 PF00589 Phage integrase family AMYT_RS14825 PF02899 Phage integrase, N-terminal SAM-like domain