locus-tag	class	description
ABLL_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABLL_RS00010	COG0592	DNA-directed DNA polymerase activity
ABLL_RS00015	COG0187	DNA topoisomerase II activity
ABLL_RS00020	COG0492	ferredoxin-NADP+ reductase activity
ABLL_RS00025	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABLL_RS00035	COG1238	metal cluster binding
ABLL_RS00045	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABLL_RS00070	COG1053	succinate dehydrogenase
ABLL_RS00075	COG0667	Aldo Keto reductase
ABLL_RS00090	COG4208	sulfate ABC transporter
ABLL_RS00105	COG0500	methyltransferase
ABLL_RS00110	COG1120	ATPase activity
ABLL_RS00115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABLL_RS00130	COG3842	ATPase activity
ABLL_RS00155	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABLL_RS00160	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABLL_RS00170	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
ABLL_RS00190	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ABLL_RS00195	COG0633	Ferredoxin
ABLL_RS00215	COG0716	FMN binding
ABLL_RS00250	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABLL_RS00255	COG0531	amino acid
ABLL_RS00270	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABLL_RS00275	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABLL_RS00280	COG1733	regulation of RNA biosynthetic process
ABLL_RS00300	COG0426	domain, Protein
ABLL_RS00315	COG1280	lysine exporter protein (LysE YggA)
ABLL_RS00350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABLL_RS00385	COG0840	transmembrane signaling receptor activity
ABLL_RS00390	COG0564	pseudouridine synthase activity
ABLL_RS00395	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABLL_RS00400	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABLL_RS00405	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABLL_RS00440	COG2954	triphosphatase activity
ABLL_RS00445	COG1151	hydroxylamine reductase activity
ABLL_RS00460	COG2885	chlorophyll binding
ABLL_RS00465	COG0052	Belongs to the universal ribosomal protein uS2 family
ABLL_RS00470	COG0604	alcohol dehydrogenase
ABLL_RS00475	COG1733	regulation of RNA biosynthetic process
ABLL_RS00480	COG0390	transport system, permease component
ABLL_RS00490	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABLL_RS00495	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABLL_RS00520	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABLL_RS00525	COG1252	NADH dehydrogenase
ABLL_RS00530	COG2030	dehydratase
ABLL_RS00535	COG0659	secondary active sulfate transmembrane transporter activity
ABLL_RS00540	COG1960	acyl-CoA dehydrogenase activity
ABLL_RS00545	COG2181	nitrate reductase activity
ABLL_RS00545	COG0247	lactate metabolic process
ABLL_RS00555	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABLL_RS00560	COG0500	methyltransferase
ABLL_RS00565	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABLL_RS00570	COG2050	protein possibly involved in aromatic compounds catabolism
ABLL_RS00575	COG0824	Thioesterase
ABLL_RS00590	COG0183	Belongs to the thiolase family
ABLL_RS00595	COG5002	protein histidine kinase activity
ABLL_RS00605	COG0745	RESPONSE REGULATOR receiver
ABLL_RS00610	COG3852	Histidine kinase
ABLL_RS00615	COG1556	Lactate utilization protein
ABLL_RS00620	COG1139	Iron-sulfur cluster binding protein
ABLL_RS00625	COG0247	lactate metabolic process
ABLL_RS00635	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABLL_RS00640	COG0511	ligase activity, forming carbon-carbon bonds
ABLL_RS00645	COG0439	Biotin carboxylase
ABLL_RS00650	COG0513	Belongs to the DEAD box helicase family
ABLL_RS00655	COG0306	phosphate transporter
ABLL_RS00665	COG0367	asparagine synthase
ABLL_RS00675	COG0778	Nitroreductase
ABLL_RS00680	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABLL_RS00690	COG1053	succinate dehydrogenase
ABLL_RS00700	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ABLL_RS00705	COG1981	membrane
ABLL_RS00710	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ABLL_RS00710	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABLL_RS00715	COG1187	pseudouridine synthase activity
ABLL_RS00720	COG0517	IMP dehydrogenase activity
ABLL_RS00720	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ABLL_RS00725	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ABLL_RS00730	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABLL_RS00735	COG0107	imidazoleglycerol-phosphate synthase activity
ABLL_RS00750	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABLL_RS00755	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABLL_RS00760	COG0724	RNA recognition motif
ABLL_RS00765	COG0745	RESPONSE REGULATOR receiver
ABLL_RS00770	COG0642	Histidine kinase
ABLL_RS00805	COG0534	Mate efflux family protein
ABLL_RS00810	COG0789	Transcriptional regulator
ABLL_RS00815	COG1335	isochorismatase
ABLL_RS00820	COG0460	homoserine dehydrogenase
ABLL_RS00825	COG0436	Aminotransferase
ABLL_RS00840	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABLL_RS00845	COG0254	rRNA binding
ABLL_RS00850	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABLL_RS00940	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABLL_RS00950	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABLL_RS00955	COG0237	dephospho-CoA kinase activity
ABLL_RS00960	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ABLL_RS00965	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABLL_RS00970	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABLL_RS00990	COG2353	YceI-like domain
ABLL_RS00995	COG1846	Transcriptional regulator
ABLL_RS01000	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ABLL_RS01005	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABLL_RS01010	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABLL_RS01020	COG0505	Belongs to the CarA family
ABLL_RS01025	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABLL_RS01035	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABLL_RS01035	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABLL_RS01050	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABLL_RS01055	COG0489	protein tyrosine kinase activity
ABLL_RS01065	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABLL_RS01065	COG0140	phosphoribosyl-ATP diphosphatase activity
ABLL_RS01090	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABLL_RS01100	COG0646	methionine synthase
ABLL_RS01100	COG1410	methionine synthase
ABLL_RS01105	COG0697	spore germination
ABLL_RS01115	COG1979	alcohol dehydrogenase
ABLL_RS01120	COG3647	Membrane
ABLL_RS01135	COG1686	Belongs to the peptidase S11 family
ABLL_RS01150	COG1854	S-ribosylhomocysteine lyase activity
ABLL_RS01185	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABLL_RS01210	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABLL_RS01215	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABLL_RS01225	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABLL_RS01230	COG0546	phosphoglycolate phosphatase activity
ABLL_RS01240	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABLL_RS01245	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABLL_RS01250	COG5002	protein histidine kinase activity
ABLL_RS01265	COG0704	Plays a role in the regulation of phosphate uptake
ABLL_RS01270	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABLL_RS01275	COG0581	inorganic phosphate transmembrane transporter activity
ABLL_RS01280	COG0573	inorganic phosphate transmembrane transporter activity
ABLL_RS01285	COG2199	diguanylate cyclase activity
ABLL_RS01285	COG2200	EAL domain
ABLL_RS01285	COG2203	Gaf domain
ABLL_RS01290	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABLL_RS01300	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABLL_RS01305	COG0268	Binds directly to 16S ribosomal RNA
ABLL_RS01310	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABLL_RS01320	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABLL_RS01340	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABLL_RS01345	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABLL_RS01350	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABLL_RS01355	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABLL_RS01385	COG0575	Belongs to the CDS family
ABLL_RS01390	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABLL_RS01410	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABLL_RS01415	COG0023	Translation Initiation Factor
ABLL_RS01420	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABLL_RS01420	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABLL_RS01425	COG1324	tolerance protein
ABLL_RS01430	COG2022	thiamine diphosphate biosynthetic process
ABLL_RS01490	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABLL_RS01540	COG0745	RESPONSE REGULATOR receiver
ABLL_RS01555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABLL_RS01570	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABLL_RS01580	COG2084	Dehydrogenase
ABLL_RS01595	COG1346	cytolysis
ABLL_RS01600	COG0640	Transcriptional regulator
ABLL_RS01610	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABLL_RS01615	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABLL_RS01635	COG0659	secondary active sulfate transmembrane transporter activity
ABLL_RS01655	COG4589	Belongs to the CDS family
ABLL_RS01675	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ABLL_RS01700	COG0666	response to abiotic stimulus
ABLL_RS01705	COG0004	ammonium transporteR
ABLL_RS01715	COG0004	ammonium transporteR
ABLL_RS01725	COG0418	dihydroorotase activity
ABLL_RS01730	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABLL_RS01735	COG1706	bacterial-type flagellum-dependent cell motility
ABLL_RS01770	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ABLL_RS01780	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABLL_RS01795	COG0037	tRNA processing
ABLL_RS01800	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABLL_RS01805	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABLL_RS01810	COG0601	transmembrane transport
ABLL_RS01820	COG0736	holo-[acyl-carrier-protein] synthase activity
ABLL_RS01825	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABLL_RS01835	COG0560	Phosphoserine phosphatase
ABLL_RS01845	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ABLL_RS01850	COG3248	Nucleoside-binding outer membrane protein
ABLL_RS01860	COG1393	Belongs to the ArsC family
ABLL_RS01865	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABLL_RS01870	COG0343	queuine tRNA-ribosyltransferase activity
ABLL_RS01880	COG0436	Aminotransferase
ABLL_RS01895	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABLL_RS01905	COG2861	carbohydrate metabolic process
ABLL_RS01910	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ABLL_RS01915	COG0557	exoribonuclease II activity
ABLL_RS01930	COG0360	Binds together with S18 to 16S ribosomal RNA
ABLL_RS01935	COG0629	single-stranded DNA binding
ABLL_RS01940	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABLL_RS01945	COG0215	cysteine-tRNA ligase activity
ABLL_RS01950	COG0195	Participates in both transcription termination and antitermination
ABLL_RS01960	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABLL_RS01965	COG2121	Domain of unknown function (DUF374)
ABLL_RS01975	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
ABLL_RS01985	COG0288	reversible hydration of carbon dioxide
ABLL_RS01990	COG0156	8-amino-7-oxononanoate synthase activity
ABLL_RS01995	COG0792	nuclease activity
ABLL_RS02025	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABLL_RS02035	COG0540	Belongs to the ATCase OTCase family
ABLL_RS02040	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABLL_RS02060	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABLL_RS02065	COG1687	branched-chain amino acid
ABLL_RS02070	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABLL_RS02075	COG0416	fatty acid biosynthetic process
ABLL_RS02080	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABLL_RS02090	COG0105	UTP biosynthetic process
ABLL_RS02100	COG0450	alkyl hydroperoxide reductase
ABLL_RS02105	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABLL_RS02115	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABLL_RS02120	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABLL_RS02125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABLL_RS02135	COG0181	hydroxymethylbilane synthase activity
ABLL_RS02150	COG2828	Protein conserved in bacteria
ABLL_RS02155	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABLL_RS02165	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ABLL_RS02175	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABLL_RS02205	COG0514	ATP-dependent DNA helicase (RecQ)
ABLL_RS02215	COG0640	Transcriptional regulator
ABLL_RS02220	COG2217	Heavy metal translocating P-type atpase
ABLL_RS02235	COG1451	nucleotide metabolic process
ABLL_RS02240	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ABLL_RS02250	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABLL_RS02255	COG1053	succinate dehydrogenase
ABLL_RS02265	COG1007	ATP synthesis coupled electron transport
ABLL_RS02275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABLL_RS02280	COG0713	ATP synthesis coupled electron transport
ABLL_RS02285	COG0839	Belongs to the complex I subunit 6 family
ABLL_RS02290	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS02295	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABLL_RS02300	COG1034	ATP synthesis coupled electron transport
ABLL_RS02305	COG0372	Belongs to the citrate synthase family
ABLL_RS02320	COG0649	NAD binding
ABLL_RS02320	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS02325	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS02330	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS02335	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ABLL_RS02340	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABLL_RS02345	COG3610	response to peptide
ABLL_RS02350	COG2966	Psort location CytoplasmicMembrane, score
ABLL_RS02360	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABLL_RS02365	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABLL_RS02385	COG0784	Response regulator, receiver
ABLL_RS02385	COG2205	protein histidine kinase activity
ABLL_RS02385	COG5002	protein histidine kinase activity
ABLL_RS02415	COG4771	TonB-dependent receptor
ABLL_RS02445	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABLL_RS02465	COG0840	transmembrane signaling receptor activity
ABLL_RS02485	COG3043	anaerobic respiration
ABLL_RS02490	COG0348	domain, Protein
ABLL_RS02495	COG0437	4 iron, 4 sulfur cluster binding
ABLL_RS02500	COG0243	molybdopterin cofactor binding
ABLL_RS02505	COG2200	EAL domain
ABLL_RS02505	COG2199	diguanylate cyclase activity
ABLL_RS02505	COG3287	FIST C domain
ABLL_RS02510	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABLL_RS02525	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABLL_RS02530	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABLL_RS02535	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABLL_RS02545	COG2404	hydrolase activity, acting on ester bonds
ABLL_RS02550	COG1832	CoA-binding protein
ABLL_RS02555	COG0642	Histidine kinase
ABLL_RS02560	COG0745	RESPONSE REGULATOR receiver
ABLL_RS02565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABLL_RS02570	COG0191	fructose-bisphosphate aldolase activity
ABLL_RS02575	COG0745	RESPONSE REGULATOR receiver
ABLL_RS02580	COG0642	Histidine kinase
ABLL_RS02600	COG0811	peptide transport
ABLL_RS02625	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABLL_RS02635	COG0142	geranyltranstransferase activity
ABLL_RS02640	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABLL_RS02645	COG0442	prolyl-tRNA aminoacylation
ABLL_RS02650	COG0668	transmembrane transport
ABLL_RS02670	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABLL_RS02675	COG1862	Preprotein translocase
ABLL_RS02680	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABLL_RS02685	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABLL_RS02700	COG0495	leucyl-tRNA aminoacylation
ABLL_RS02710	COG0285	dihydrofolate synthase activity
ABLL_RS02745	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ABLL_RS02770	COG4399	Belongs to the UPF0754 family
ABLL_RS02785	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABLL_RS02800	COG3292	Two component regulator propeller
ABLL_RS02800	COG2205	protein histidine kinase activity
ABLL_RS02800	COG0745	RESPONSE REGULATOR receiver
ABLL_RS02825	COG0745	RESPONSE REGULATOR receiver
ABLL_RS02830	COG0642	Histidine kinase
ABLL_RS02835	COG2081	HI0933 family
ABLL_RS02840	COG0840	transmembrane signaling receptor activity
ABLL_RS02850	COG0840	transmembrane signaling receptor activity
ABLL_RS02860	COG1692	metallophosphoesterase
ABLL_RS02875	COG2226	methyltransferase
ABLL_RS02880	COG1570	exodeoxyribonuclease VII activity
ABLL_RS02890	COG2204	response regulator
ABLL_RS02895	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABLL_RS02905	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ABLL_RS02910	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABLL_RS02920	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABLL_RS02925	COG0459	protein refolding
ABLL_RS02930	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ABLL_RS02940	COG0745	RESPONSE REGULATOR receiver
ABLL_RS02945	COG1408	metallophosphoesterase
ABLL_RS02970	COG1136	(ABC) transporter
ABLL_RS02985	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABLL_RS03005	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABLL_RS03010	COG0352	thiamine-phosphate diphosphorylase activity
ABLL_RS03015	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABLL_RS03025	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABLL_RS03030	COG2264	protein methyltransferase activity
ABLL_RS03035	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABLL_RS03040	COG3437	response regulator, receiver
ABLL_RS03040	COG0784	Response regulator, receiver
ABLL_RS03050	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABLL_RS03070	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABLL_RS03100	COG1132	(ABC) transporter
ABLL_RS03115	COG3706	GGDEF domain
ABLL_RS03120	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABLL_RS03125	COG1090	epimerase
ABLL_RS03130	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABLL_RS03140	COG0481	GTPase activity
ABLL_RS03155	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABLL_RS03165	COG0482	sulfurtransferase activity
ABLL_RS03170	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABLL_RS03175	COG0006	proline dipeptidase activity
ABLL_RS03180	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABLL_RS03185	COG0402	S-adenosylhomocysteine deaminase activity
ABLL_RS03190	COG0616	signal peptide processing
ABLL_RS03200	COG0280	phosphate acetyltransferase
ABLL_RS03205	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABLL_RS03210	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABLL_RS03215	COG2176	DNA-directed DNA polymerase activity
ABLL_RS03235	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABLL_RS03245	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABLL_RS03255	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABLL_RS03265	COG0745	RESPONSE REGULATOR receiver
ABLL_RS03315	COG1546	Belongs to the CinA family
ABLL_RS03315	COG1058	Belongs to the CinA family
ABLL_RS03320	COG0579	oxidoreductase
ABLL_RS03325	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABLL_RS03340	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABLL_RS03370	COG0714	Associated with various cellular activities
ABLL_RS03375	COG0052	Belongs to the universal ribosomal protein uS2 family
ABLL_RS03380	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABLL_RS03385	COG1136	(ABC) transporter
ABLL_RS03395	COG0194	GDP metabolic process
ABLL_RS03400	COG5002	protein histidine kinase activity
ABLL_RS03400	COG5001	Diguanylate cyclase
ABLL_RS03405	COG2217	Heavy metal translocating P-type atpase
ABLL_RS03420	COG4608	Belongs to the ABC transporter superfamily
ABLL_RS03425	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABLL_RS03440	COG1355	regulation of microtubule-based process
ABLL_RS03450	COG1121	(ABC) transporter
ABLL_RS03455	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABLL_RS03470	COG2996	Protein conserved in bacteria
ABLL_RS03475	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ABLL_RS03480	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ABLL_RS03490	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABLL_RS03500	COG0210	DNA helicase
ABLL_RS03505	COG0475	glutathione-regulated potassium exporter activity
ABLL_RS03505	COG0569	domain protein
ABLL_RS03510	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABLL_RS03535	COG3258	Cytochrome c
ABLL_RS03575	COG0693	protein deglycase activity
ABLL_RS03595	COG0525	valine-tRNA ligase activity
ABLL_RS03600	COG0534	Mate efflux family protein
ABLL_RS03610	COG4895	conserved protein (DUF2196)
ABLL_RS03615	COG1047	Peptidyl-prolyl cis-trans
ABLL_RS03635	COG2814	Major facilitator Superfamily
ABLL_RS03640	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABLL_RS03650	COG2197	response regulator
ABLL_RS03680	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ABLL_RS03685	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABLL_RS03690	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABLL_RS03715	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABLL_RS03725	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABLL_RS03730	COG1309	transcriptional regulator
ABLL_RS03735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABLL_RS03755	COG0840	transmembrane signaling receptor activity
ABLL_RS03760	COG2199	diguanylate cyclase activity
ABLL_RS03760	COG2200	EAL domain
ABLL_RS03770	COG0439	Biotin carboxylase
ABLL_RS03775	COG3040	lipid binding
ABLL_RS03805	COG2151	metal-sulfur cluster biosynthetic enzyme
ABLL_RS03810	COG2166	iron-sulfur cluster assembly
ABLL_RS03815	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABLL_RS03825	COG0396	ATPase activity
ABLL_RS03830	COG0719	Fe-S assembly protein
ABLL_RS03840	COG2202	Pas domain
ABLL_RS03840	COG1366	Belongs to the anti-sigma-factor antagonist family
ABLL_RS03850	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABLL_RS03850	COG0822	iron-sulfur transferase activity
ABLL_RS03850	COG2906	2 iron, 2 sulfur cluster binding
ABLL_RS03870	COG2239	Acts as a magnesium transporter
ABLL_RS03900	COG0165	Argininosuccinate lyase
ABLL_RS03905	COG0835	chemotaxis
ABLL_RS03905	COG0784	Response regulator, receiver
ABLL_RS03910	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABLL_RS03915	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABLL_RS03930	COG0556	nucleotide-excision repair
ABLL_RS03935	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABLL_RS03945	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ABLL_RS03970	COG0698	ribose 5-phosphate isomerase
ABLL_RS03975	COG0681	Belongs to the peptidase S26 family
ABLL_RS03980	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABLL_RS03985	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABLL_RS03990	COG0193	aminoacyl-tRNA hydrolase activity
ABLL_RS04005	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABLL_RS04015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABLL_RS04025	COG1758	RNA polymerase activity
ABLL_RS04030	COG0528	UMP kinase activity
ABLL_RS04040	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABLL_RS04045	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABLL_RS04050	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABLL_RS04060	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABLL_RS04065	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABLL_RS04080	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABLL_RS04090	COG0305	Participates in initiation and elongation during chromosome replication
ABLL_RS04105	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABLL_RS04115	COG1086	Polysaccharide biosynthesis protein
ABLL_RS04120	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABLL_RS04130	COG2089	acid synthase
ABLL_RS04135	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ABLL_RS04140	COG0107	imidazoleglycerol-phosphate synthase activity
ABLL_RS04195	COG1215	transferase activity, transferring glycosyl groups
ABLL_RS04200	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABLL_RS04205	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
ABLL_RS04210	COG1086	Polysaccharide biosynthesis protein
ABLL_RS04220	COG1793	dna ligase
ABLL_RS04225	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABLL_RS04230	COG0133	tryptophan synthase activity
ABLL_RS04240	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABLL_RS04245	COG0848	biopolymer transport protein
ABLL_RS04270	COG0577	efflux transmembrane transporter activity
ABLL_RS04270	COG1136	(ABC) transporter
ABLL_RS04275	COG1136	(ABC) transporter
ABLL_RS04275	COG0577	efflux transmembrane transporter activity
ABLL_RS04330	COG0114	fumarate hydratase activity
ABLL_RS04340	COG3852	Histidine kinase
ABLL_RS04345	COG0745	RESPONSE REGULATOR receiver
ABLL_RS04370	COG4773	Receptor
ABLL_RS04400	COG1918	ferrous iron import across plasma membrane
ABLL_RS04400	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ABLL_RS04405	COG1918	ferrous iron import across plasma membrane
ABLL_RS04410	COG4771	TonB-dependent receptor
ABLL_RS04415	COG2819	hydrolase of the alpha beta superfamily
ABLL_RS04420	COG3920	Histidine kinase
ABLL_RS04425	COG0784	Response regulator, receiver
ABLL_RS04430	COG4771	TonB-dependent receptor
ABLL_RS04445	COG2801	Transposase and inactivated derivatives
ABLL_RS04465	COG2801	Transposase and inactivated derivatives
ABLL_RS04470	COG0745	RESPONSE REGULATOR receiver
ABLL_RS04505	COG0514	ATP-dependent DNA helicase (RecQ)
ABLL_RS04555	COG0419	ATPase involved in DNA repair
ABLL_RS04560	COG0420	3'-5' exonuclease activity
ABLL_RS04575	COG0039	L-malate dehydrogenase activity
ABLL_RS04580	COG3422	double-strand break repair
ABLL_RS04695	COG0012	GTP binding
ABLL_RS04715	COG3123	guanosine phosphorylase activity
ABLL_RS04730	COG4974	Belongs to the 'phage' integrase family
ABLL_RS04760	COG2815	serine threonine protein kinase
ABLL_RS04760	COG0515	serine threonine protein kinase
ABLL_RS04765	COG0515	serine threonine protein kinase
ABLL_RS04765	COG2815	serine threonine protein kinase
ABLL_RS04780	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABLL_RS04795	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABLL_RS04885	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABLL_RS04890	COG0585	pseudouridine synthase activity
ABLL_RS04900	COG4773	Receptor
ABLL_RS04905	COG0840	transmembrane signaling receptor activity
ABLL_RS04910	COG0632	four-way junction helicase activity
ABLL_RS04915	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABLL_RS04925	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABLL_RS04935	COG1733	regulation of RNA biosynthetic process
ABLL_RS04940	COG0778	Nitroreductase
ABLL_RS04950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABLL_RS04955	COG0051	transcription antitermination factor activity, RNA binding
ABLL_RS04960	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABLL_RS04965	COG0088	Forms part of the polypeptide exit tunnel
ABLL_RS04970	COG0089	rRNA binding
ABLL_RS04975	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABLL_RS04980	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABLL_RS04985	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABLL_RS04990	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABLL_RS04995	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABLL_RS05000	COG0255	Belongs to the universal ribosomal protein uL29 family
ABLL_RS05005	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABLL_RS05010	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABLL_RS05015	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABLL_RS05020	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABLL_RS05025	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABLL_RS05030	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABLL_RS05035	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABLL_RS05040	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABLL_RS05045	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABLL_RS05050	COG0200	Binds to the 23S rRNA
ABLL_RS05055	COG0201	protein transport
ABLL_RS05060	COG0024	Methionine aminopeptidase
ABLL_RS05065	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABLL_RS05075	COG1573	uracil-dna glycosylase
ABLL_RS05085	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABLL_RS05100	COG1032	radical SAM domain protein
ABLL_RS05110	COG0563	adenylate kinase activity
ABLL_RS05125	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABLL_RS05130	COG0322	excinuclease ABC activity
ABLL_RS05140	COG3706	GGDEF domain
ABLL_RS05150	COG3201	nicotinamide mononucleotide transporter
ABLL_RS05155	COG0386	Belongs to the glutathione peroxidase family
ABLL_RS05160	COG0840	transmembrane signaling receptor activity
ABLL_RS05165	COG0840	transmembrane signaling receptor activity
ABLL_RS05170	COG0840	transmembrane signaling receptor activity
ABLL_RS05175	COG0840	transmembrane signaling receptor activity
ABLL_RS05185	COG0745	RESPONSE REGULATOR receiver
ABLL_RS05195	COG0784	Response regulator, receiver
ABLL_RS05195	COG2205	protein histidine kinase activity
ABLL_RS05225	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABLL_RS05235	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABLL_RS05240	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABLL_RS05270	COG0829	nickel cation binding
ABLL_RS05275	COG0683	leucine binding
ABLL_RS05290	COG0411	ABC transporter
ABLL_RS05315	COG4266	Belongs to the allantoicase family
ABLL_RS05330	COG0832	Belongs to the urease beta subunit family
ABLL_RS05330	COG0831	urea catabolic process
ABLL_RS05335	COG0804	urea catabolic process
ABLL_RS05340	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
ABLL_RS05350	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABLL_RS05385	COG1846	Transcriptional regulator
ABLL_RS05395	COG3706	GGDEF domain
ABLL_RS05400	COG0708	Exodeoxyribonuclease III
ABLL_RS05435	COG0166	Belongs to the GPI family
ABLL_RS05480	COG2252	PERMEase
ABLL_RS05485	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
ABLL_RS05495	COG2363	Small membrane protein
ABLL_RS05505	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABLL_RS05510	COG2233	PERMEase
ABLL_RS05515	COG1666	GTP binding
ABLL_RS05525	COG0745	RESPONSE REGULATOR receiver
ABLL_RS05530	COG0642	Histidine kinase
ABLL_RS05550	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABLL_RS05555	COG0135	phosphoribosylanthranilate isomerase activity
ABLL_RS05560	COG2176	DNA-directed DNA polymerase activity
ABLL_RS05565	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABLL_RS05575	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABLL_RS05580	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABLL_RS05580	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABLL_RS05590	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ABLL_RS05595	COG0727	PFAM Uncharacterised protein family (UPF0153)
ABLL_RS05605	COG0134	indole-3-glycerol-phosphate synthase activity
ABLL_RS05610	COG0583	DNA-binding transcription factor activity
ABLL_RS05620	COG0840	transmembrane signaling receptor activity
ABLL_RS05630	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABLL_RS05635	COG0750	zinc metalloprotease
ABLL_RS05640	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABLL_RS05645	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS05650	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABLL_RS05665	COG0167	dihydroorotate dehydrogenase activity
ABLL_RS05670	COG1132	(ABC) transporter
ABLL_RS05675	COG0728	peptidoglycan biosynthetic process
ABLL_RS05685	COG1592	Rubrerythrin
ABLL_RS05695	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABLL_RS05700	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABLL_RS05740	COG1858	cytochrome C peroxidase
ABLL_RS05755	COG0552	protein localization to endoplasmic reticulum
ABLL_RS05760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABLL_RS05770	COG1418	mRNA catabolic process
ABLL_RS05775	COG0742	ribosomal rna small subunit methyltransferase
ABLL_RS05780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABLL_RS05790	COG0300	oxidoreductase activity
ABLL_RS05805	COG3258	Cytochrome c
ABLL_RS05820	COG0642	Histidine kinase
ABLL_RS05835	COG1610	YqeY-like protein
ABLL_RS05840	COG0488	(ABC) transporter
ABLL_RS05845	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ABLL_RS05850	COG0436	Aminotransferase
ABLL_RS05855	COG1451	nucleotide metabolic process
ABLL_RS05865	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ABLL_RS05870	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABLL_RS05875	COG0519	Catalyzes the synthesis of GMP from XMP
ABLL_RS05875	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABLL_RS05915	COG2226	methyltransferase
ABLL_RS05945	COG0596	Alpha beta hydrolase
ABLL_RS05950	COG0204	Acyl-transferase
ABLL_RS05960	COG0531	amino acid
ABLL_RS05980	COG1696	Membrane protein involved in D-alanine export
ABLL_RS05985	COG0564	pseudouridine synthase activity
ABLL_RS06005	COG1393	Belongs to the ArsC family
ABLL_RS06015	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABLL_RS06020	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABLL_RS06025	COG2223	nitrite transmembrane transporter activity
ABLL_RS06030	COG2186	Transcriptional regulator
ABLL_RS06035	COG2807	transmembrane transport
ABLL_RS06050	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS06055	COG0519	Catalyzes the synthesis of GMP from XMP
ABLL_RS06055	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABLL_RS06085	COG1253	flavin adenine dinucleotide binding
ABLL_RS06100	COG0628	permease
ABLL_RS06115	COG1253	flavin adenine dinucleotide binding
ABLL_RS06130	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABLL_RS06170	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABLL_RS06175	COG0513	Belongs to the DEAD box helicase family
ABLL_RS06180	COG3287	FIST C domain
ABLL_RS06180	COG2199	diguanylate cyclase activity
ABLL_RS06180	COG2200	EAL domain
ABLL_RS06185	COG0840	transmembrane signaling receptor activity
ABLL_RS06190	COG0840	transmembrane signaling receptor activity
ABLL_RS06205	COG1045	serine acetyltransferase
ABLL_RS06210	COG1166	arginine decarboxylase activity
ABLL_RS06215	COG0124	histidyl-tRNA synthetase
ABLL_RS06220	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABLL_RS06225	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABLL_RS06230	COG0163	prenyltransferase activity
ABLL_RS06240	COG0359	binds to the 23S rRNA
ABLL_RS06245	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABLL_RS06250	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABLL_RS06260	COG0084	hydrolase, TatD family'
ABLL_RS06270	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABLL_RS06275	COG0131	Imidazoleglycerol-phosphate dehydratase
ABLL_RS06280	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABLL_RS06295	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABLL_RS06300	COG0456	acetyltransferase
ABLL_RS06310	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABLL_RS06320	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABLL_RS06325	COG3576	pyridoxamine 5-phosphate
ABLL_RS06345	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABLL_RS06355	COG2897	thiosulfate sulfurtransferase activity
ABLL_RS06365	COG1338	Plays a role in the flagellum-specific transport system
ABLL_RS06425	COG0849	cell division
ABLL_RS06430	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABLL_RS06435	COG2391	methyltransferase activity
ABLL_RS06460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABLL_RS06480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABLL_RS06485	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABLL_RS06615	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABLL_RS06800	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ABLL_RS06805	COG1360	Flagellar Motor Protein
ABLL_RS06810	COG0861	Integral membrane protein TerC family
ABLL_RS06830	COG0842	Transport permease protein
ABLL_RS06835	COG0842	Transport permease protein
ABLL_RS06840	COG1131	(ABC) transporter
ABLL_RS06845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABLL_RS06850	COG0789	Transcriptional regulator
ABLL_RS06855	COG0484	heat shock protein binding
ABLL_RS06870	COG2201	protein-glutamate methylesterase activity
ABLL_RS06880	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABLL_RS06880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABLL_RS06995	COG0582	viral genome integration into host DNA
ABLL_RS07005	COG0776	regulation of translation
ABLL_RS07015	COG0275	rRNA processing
ABLL_RS07045	COG0318	PFAM AMP-dependent synthetase and ligase
ABLL_RS07055	COG4865	methylaspartate mutase activity
ABLL_RS07065	COG0039	L-malate dehydrogenase activity
ABLL_RS07085	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABLL_RS07090	COG0653	protein targeting
ABLL_RS07100	COG2207	Transcriptional regulator
ABLL_RS07105	COG1979	alcohol dehydrogenase
ABLL_RS07115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABLL_RS07115	COG4191	Histidine kinase
ABLL_RS07120	COG1587	Uroporphyrinogen-III synthase
ABLL_RS07120	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABLL_RS07130	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABLL_RS07135	COG0243	molybdopterin cofactor binding
ABLL_RS07140	COG2200	EAL domain
ABLL_RS07140	COG3287	FIST C domain
ABLL_RS07140	COG2199	diguanylate cyclase activity
ABLL_RS07145	COG2815	serine threonine protein kinase
ABLL_RS07145	COG0515	serine threonine protein kinase
ABLL_RS07150	COG2223	nitrite transmembrane transporter activity
ABLL_RS07155	COG0754	glutathionylspermidine amidase activity
ABLL_RS07165	COG2199	diguanylate cyclase activity
ABLL_RS07185	COG0745	RESPONSE REGULATOR receiver
ABLL_RS07195	COG0745	RESPONSE REGULATOR receiver
ABLL_RS07245	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABLL_RS07260	COG0280	phosphate acetyltransferase
ABLL_RS07260	COG0281	malic enzyme
ABLL_RS07265	COG0788	formyltetrahydrofolate deformylase activity
ABLL_RS07270	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABLL_RS07285	COG0745	RESPONSE REGULATOR receiver
ABLL_RS07295	COG0330	HflC and HflK could
ABLL_RS07315	COG1271	oxidase subunit
ABLL_RS07340	COG0450	alkyl hydroperoxide reductase
ABLL_RS07355	COG0811	peptide transport
ABLL_RS07360	COG0848	biopolymer transport protein
ABLL_RS07375	COG0419	ATPase involved in DNA repair
ABLL_RS07400	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABLL_RS07405	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
ABLL_RS07410	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABLL_RS07415	COG1187	pseudouridine synthase activity
ABLL_RS07440	COG4206	TonB-dependent receptor
ABLL_RS07455	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABLL_RS07480	COG0667	Aldo Keto reductase
ABLL_RS07485	COG0840	transmembrane signaling receptor activity
ABLL_RS07500	COG0824	Thioesterase
ABLL_RS07510	COG0501	Belongs to the peptidase M48B family
ABLL_RS07515	COG1322	Protein conserved in bacteria
ABLL_RS07525	COG2321	neutral zinc metallopeptidase
ABLL_RS07550	COG0037	tRNA processing
ABLL_RS07555	COG1683	Conserved Protein
ABLL_RS07580	COG3706	GGDEF domain
ABLL_RS07580	COG2203	Gaf domain
ABLL_RS07580	COG5001	Diguanylate cyclase
ABLL_RS07580	COG4251	negative regulation of phosphorylation
ABLL_RS07600	COG0028	Belongs to the TPP enzyme family
ABLL_RS07605	COG0440	acetolactate synthase activity
ABLL_RS07610	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABLL_RS07615	COG1674	ftsk spoiiie
ABLL_RS07615	COG1196	nuclear chromosome segregation
ABLL_RS07620	COG0745	RESPONSE REGULATOR receiver
ABLL_RS07625	COG0642	Histidine kinase
ABLL_RS07635	COG1749	Flagellar hook protein flgE
ABLL_RS07670	COG1160	GTP binding
ABLL_RS07675	COG0659	secondary active sulfate transmembrane transporter activity
ABLL_RS07695	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ABLL_RS07705	COG1185	polyribonucleotide nucleotidyltransferase activity
ABLL_RS07715	COG0643	Histidine kinase
ABLL_RS07715	COG2198	Histidine kinase
ABLL_RS07720	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ABLL_RS07725	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ABLL_RS07730	COG2201	protein-glutamate methylesterase activity
ABLL_RS07740	COG0582	viral genome integration into host DNA
ABLL_RS07760	COG0339	signal peptide processing
ABLL_RS07765	COG2890	protein-(glutamine-N5) methyltransferase activity
ABLL_RS07770	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABLL_RS07775	COG0494	nUDIX hydrolase
ABLL_RS07780	COG0527	aspartate kinase activity
ABLL_RS07795	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABLL_RS07800	COG0287	Prephenate dehydrogenase
ABLL_RS07805	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABLL_RS07810	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
ABLL_RS07815	COG0612	Peptidase, M16
ABLL_RS07820	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABLL_RS07850	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ABLL_RS07860	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABLL_RS07860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABLL_RS07885	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABLL_RS07890	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ABLL_RS07930	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABLL_RS07955	COG0357	Ribosomal RNA small subunit methyltransferase G
ABLL_RS07960	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABLL_RS07965	COG0113	porphobilinogen synthase activity
ABLL_RS07985	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABLL_RS07985	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABLL_RS07990	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABLL_RS07995	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABLL_RS08005	COG1663	tetraacyldisaccharide 4'-kinase activity
ABLL_RS08015	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABLL_RS08035	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABLL_RS08040	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABLL_RS08045	COG0805	protein transport
ABLL_RS08050	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABLL_RS08085	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABLL_RS08100	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABLL_RS08120	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABLL_RS08120	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABLL_RS08125	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABLL_RS08130	COG2200	EAL domain
ABLL_RS08130	COG2199	diguanylate cyclase activity
ABLL_RS08130	COG3287	FIST C domain
ABLL_RS08135	COG3706	GGDEF domain
ABLL_RS08140	COG1137	ATPase activity
ABLL_RS08145	COG0802	atpase or kinase
ABLL_RS08150	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABLL_RS08160	COG0137	argininosuccinate synthase activity
ABLL_RS08170	COG0189	ligase activity
ABLL_RS08190	COG0569	domain protein
ABLL_RS08195	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABLL_RS08200	COG0745	RESPONSE REGULATOR receiver
ABLL_RS08205	COG2205	protein histidine kinase activity
ABLL_RS08225	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABLL_RS08235	COG0484	heat shock protein binding
ABLL_RS08240	COG0133	tryptophan synthase activity
ABLL_RS08260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABLL_RS08265	COG5001	Diguanylate cyclase
ABLL_RS08270	COG2203	Gaf domain
ABLL_RS08270	COG3706	GGDEF domain
ABLL_RS08270	COG4251	negative regulation of phosphorylation
ABLL_RS08270	COG5001	Diguanylate cyclase
ABLL_RS08275	COG0500	methyltransferase
ABLL_RS08280	COG1333	cytochrome c biogenesis protein
ABLL_RS08280	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABLL_RS08285	COG0745	RESPONSE REGULATOR receiver
ABLL_RS08295	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABLL_RS08310	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABLL_RS08320	COG2205	protein histidine kinase activity
ABLL_RS08325	COG0784	Response regulator, receiver
ABLL_RS08325	COG3437	response regulator, receiver
ABLL_RS08330	COG1607	acyl-coa hydrolase
ABLL_RS08335	COG0488	(ABC) transporter
ABLL_RS08345	COG1979	alcohol dehydrogenase
ABLL_RS08350	COG2207	Transcriptional regulator
ABLL_RS08355	COG3706	GGDEF domain
ABLL_RS08360	COG2197	response regulator
ABLL_RS08365	COG0643	Histidine kinase
ABLL_RS08365	COG2198	Histidine kinase
ABLL_RS08370	COG2205	protein histidine kinase activity
ABLL_RS08390	COG0778	Nitroreductase
ABLL_RS08410	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABLL_RS08415	COG1733	regulation of RNA biosynthetic process
ABLL_RS08430	COG2855	membrane
ABLL_RS08435	COG0583	DNA-binding transcription factor activity
ABLL_RS08445	COG1881	PFAM PEBP family protein
ABLL_RS08455	COG3706	GGDEF domain
ABLL_RS08470	COG2076	Multidrug Resistance protein
ABLL_RS08475	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABLL_RS08510	COG2824	Alkylphosphonate utilization operon protein PhnA
ABLL_RS08520	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABLL_RS08525	COG0095	Lipoate-protein ligase
ABLL_RS08530	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ABLL_RS08535	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABLL_RS08540	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABLL_RS08545	COG0488	(ABC) transporter
ABLL_RS08590	COG2329	Antibiotic biosynthesis monooxygenase
ABLL_RS08605	COG0077	Prephenate dehydratase
ABLL_RS08605	COG1605	Chorismate mutase
ABLL_RS08615	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABLL_RS08620	COG1119	ATPase activity
ABLL_RS08625	COG0784	Response regulator, receiver
ABLL_RS08625	COG2205	protein histidine kinase activity
ABLL_RS08630	COG2205	protein histidine kinase activity
ABLL_RS08630	COG2202	Pas domain
ABLL_RS08635	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABLL_RS08655	COG1193	negative regulation of DNA recombination
ABLL_RS08665	COG0471	metal ion transport
ABLL_RS08670	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABLL_RS08680	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABLL_RS08685	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABLL_RS08695	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABLL_RS08725	COG2274	protein secretion by the type I secretion system
ABLL_RS08740	COG0745	RESPONSE REGULATOR receiver
ABLL_RS08760	COG0513	Belongs to the DEAD box helicase family
ABLL_RS08775	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABLL_RS08785	COG3279	Response regulator of the LytR AlgR family
ABLL_RS08805	COG0415	Belongs to the DNA photolyase family
ABLL_RS08840	COG0642	Histidine kinase
ABLL_RS08845	COG0745	RESPONSE REGULATOR receiver
ABLL_RS08865	COG1132	(ABC) transporter
ABLL_RS08870	COG0628	permease
ABLL_RS08875	COG1472	Belongs to the glycosyl hydrolase 3 family
ABLL_RS08900	COG1620	l-lactate permease
ABLL_RS08965	COG0516	GMP reductase activity
ABLL_RS08965	COG0517	IMP dehydrogenase activity
ABLL_RS08970	COG0154	amidase activity
ABLL_RS08975	COG0203	ribosomal protein L17
ABLL_RS08980	COG0202	RNA polymerase activity
ABLL_RS08985	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABLL_RS08990	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABLL_RS08995	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABLL_RS09010	COG0473	3-isopropylmalate dehydrogenase activity
ABLL_RS09015	COG0066	3-isopropylmalate dehydratase activity
ABLL_RS09020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABLL_RS09040	COG3123	guanosine phosphorylase activity
ABLL_RS09045	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABLL_RS09060	COG0772	Belongs to the SEDS family
ABLL_RS09065	COG0564	pseudouridine synthase activity
ABLL_RS09070	COG0366	Alpha amylase catalytic
ABLL_RS09070	COG3103	Sh3 type 3 domain protein
ABLL_RS09075	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABLL_RS09080	COG2884	Cell division ATP-binding protein ftsE
ABLL_RS09095	COG1671	Belongs to the UPF0178 family
ABLL_RS09105	COG0488	(ABC) transporter
ABLL_RS09110	COG2171	N-acyltransferase activity
ABLL_RS09115	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABLL_RS09150	COG0309	Hydrogenase expression formation protein (HypE)
ABLL_RS09165	COG0409	Hydrogenase expression formation protein
ABLL_RS09170	COG0298	carbon dioxide binding
ABLL_RS09175	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABLL_RS09190	COG0840	transmembrane signaling receptor activity
ABLL_RS09200	COG2081	HI0933 family
ABLL_RS09220	COG0439	Biotin carboxylase
ABLL_RS09250	COG2354	Protein conserved in bacteria
ABLL_RS09260	COG2814	Major facilitator Superfamily
ABLL_RS09280	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABLL_RS09280	COG0301	tRNA thio-modification
ABLL_RS09305	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
ABLL_RS09330	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
ABLL_RS09445	COG2369	cell adhesion
ABLL_RS09585	COG1518	maintenance of DNA repeat elements
ABLL_RS09660	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ABLL_RS09665	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ABLL_RS09675	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ABLL_RS09690	COG1049	propionate catabolic process, 2-methylcitrate cycle
ABLL_RS09705	COG0242	peptide deformylase activity
ABLL_RS09720	COG1022	Amp-dependent synthetase and ligase
ABLL_RS09725	COG0183	Belongs to the thiolase family
ABLL_RS09730	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABLL_RS09730	COG1024	Enoyl-CoA hydratase
ABLL_RS09735	COG1960	acyl-CoA dehydrogenase activity
ABLL_RS09765	COG0217	transcriptional regulatory protein
ABLL_RS09770	COG2853	Lipoprotein
ABLL_RS09785	COG1611	Belongs to the LOG family
ABLL_RS09790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABLL_RS09795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABLL_RS09815	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ABLL_RS09830	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABLL_RS09840	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABLL_RS09845	COG0477	Major facilitator Superfamily
ABLL_RS09865	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABLL_RS09865	COG0475	glutathione-regulated potassium exporter activity
ABLL_RS09875	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABLL_RS09880	COG2169	Transcriptional regulator
ABLL_RS09880	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABLL_RS09910	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABLL_RS09915	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABLL_RS09920	COG2258	MOSC domain
ABLL_RS09940	COG0513	Belongs to the DEAD box helicase family
ABLL_RS09970	COG1944	ATP diphosphatase activity
ABLL_RS09985	COG0840	transmembrane signaling receptor activity
ABLL_RS09990	COG0328	RNA-DNA hybrid ribonuclease activity
ABLL_RS09995	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABLL_RS10020	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABLL_RS10115	COG5001	Diguanylate cyclase
ABLL_RS10115	COG5002	protein histidine kinase activity
ABLL_RS10125	COG1078	dGTPase activity
ABLL_RS10130	COG0259	pyridoxamine-phosphate oxidase activity
ABLL_RS10140	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABLL_RS10150	COG0513	Belongs to the DEAD box helicase family
ABLL_RS10165	COG2199	diguanylate cyclase activity
ABLL_RS10165	COG3287	FIST C domain
ABLL_RS10165	COG2200	EAL domain
ABLL_RS10175	COG1984	allophanate hydrolase subunit 2
ABLL_RS10185	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ABLL_RS10200	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABLL_RS10210	COG0840	transmembrane signaling receptor activity
ABLL_RS10230	COG0842	Transport permease protein
ABLL_RS10235	COG0842	Transport permease protein
ABLL_RS10235	COG1129	ABC transporter
ABLL_RS10240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABLL_RS10250	COG0306	phosphate transporter
ABLL_RS10260	COG0326	Molecular chaperone. Has ATPase activity
ABLL_RS10265	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ABLL_RS10290	COG0753	catalase activity
ABLL_RS10300	COG2995	paraquat-inducible protein a
ABLL_RS10315	COG5002	protein histidine kinase activity
ABLL_RS10315	COG5001	Diguanylate cyclase
ABLL_RS10335	COG2902	Dehydrogenase
ABLL_RS10345	COG4335	DNA alkylation repair
ABLL_RS10360	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABLL_RS10380	COG0010	Belongs to the arginase family
ABLL_RS10385	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABLL_RS10395	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABLL_RS10400	COG1227	inorganic diphosphatase activity
ABLL_RS10415	COG1027	Aspartate ammonia-lyase
ABLL_RS10420	COG0745	RESPONSE REGULATOR receiver
ABLL_RS10430	COG1115	amino acid carrier protein
ABLL_RS10435	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABLL_RS10440	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABLL_RS10445	COG1047	Peptidyl-prolyl cis-trans
ABLL_RS10460	COG2193	ferroxidase activity
ABLL_RS10465	COG0823	Involved in the tonB-independent uptake of proteins
ABLL_RS10475	COG0848	biopolymer transport protein
ABLL_RS10480	COG0811	peptide transport
ABLL_RS10485	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ABLL_RS10490	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABLL_RS10495	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABLL_RS10500	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABLL_RS10505	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABLL_RS10510	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABLL_RS10520	COG1475	DNA binding
ABLL_RS10525	COG1192	Involved in chromosome partitioning
ABLL_RS10530	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ABLL_RS10530	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ABLL_RS10540	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABLL_RS10545	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABLL_RS10550	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABLL_RS10555	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABLL_RS10560	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABLL_RS10570	COG0358	DNA primase activity
ABLL_RS10580	COG0571	ribonuclease III activity
ABLL_RS10585	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABLL_RS10595	COG0501	Belongs to the peptidase M48B family
ABLL_RS10615	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABLL_RS10625	COG0706	membrane insertase activity
ABLL_RS10630	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABLL_RS10640	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABLL_RS10645	COG0542	response to heat
ABLL_RS10660	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABLL_RS10675	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABLL_RS10685	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABLL_RS10690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABLL_RS10695	COG1120	ATPase activity
ABLL_RS10705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABLL_RS10725	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABLL_RS10740	COG0811	peptide transport
ABLL_RS10745	COG0848	biopolymer transport protein
ABLL_RS10760	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABLL_RS10775	COG0784	Response regulator, receiver
ABLL_RS10775	COG2205	protein histidine kinase activity
ABLL_RS10780	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABLL_RS10810	COG0138	bifunctional purine biosynthesis protein purh
ABLL_RS10815	COG0004	ammonium transporteR
ABLL_RS10820	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABLL_RS10830	COG0739	heme binding
ABLL_RS10830	COG1196	nuclear chromosome segregation
ABLL_RS10830	COG0741	lytic transglycosylase activity
ABLL_RS10845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABLL_RS10860	COG0302	gtp cyclohydrolase
ABLL_RS10865	COG0598	Magnesium transport protein CorA
ABLL_RS10870	COG1459	type II secretion system
ABLL_RS10890	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABLL_RS10895	COG0606	chelatase, subunit chli
ABLL_RS10905	COG0242	peptide deformylase activity
ABLL_RS10910	COG0740	serine-type endopeptidase activity
ABLL_RS10915	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABLL_RS10940	COG1773	rubredoxin
ABLL_RS10950	COG0582	viral genome integration into host DNA
ABLL_RS11080	COG0739	heme binding
ABLL_RS11100	COG3179	chitinase
ABLL_RS11115	COG3842	ATPase activity
ABLL_RS11125	COG1177	transmembrane transport
ABLL_RS11130	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ABLL_RS11145	COG0626	cystathionine gamma-synthase activity
ABLL_RS11160	COG0840	transmembrane signaling receptor activity
ABLL_RS11170	COG5002	protein histidine kinase activity
ABLL_RS11175	COG0840	transmembrane signaling receptor activity
ABLL_RS11180	COG0840	transmembrane signaling receptor activity
ABLL_RS11190	COG0583	DNA-binding transcription factor activity
ABLL_RS11215	COG0745	RESPONSE REGULATOR receiver
ABLL_RS11220	COG0456	acetyltransferase
ABLL_RS11225	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ABLL_RS11240	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABLL_RS11245	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS11250	COG2207	Transcriptional regulator
ABLL_RS11255	COG0720	synthase
ABLL_RS11270	COG1301	dicarboxylic acid transport
ABLL_RS11290	COG0840	transmembrane signaling receptor activity
ABLL_RS11295	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS11315	COG1858	cytochrome C peroxidase
ABLL_RS11345	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABLL_RS11355	COG0668	transmembrane transport
ABLL_RS11380	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABLL_RS11395	COG0348	domain, Protein
ABLL_RS11400	COG4191	Histidine kinase
ABLL_RS11405	COG2207	Transcriptional regulator
ABLL_RS11405	COG4753	response regulator
ABLL_RS11415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABLL_RS11420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABLL_RS11445	COG0716	FMN binding
ABLL_RS11460	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ABLL_RS11475	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ABLL_RS11480	COG0159	tryptophan synthase activity
ABLL_RS11485	COG0038	chloride channel
ABLL_RS11495	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABLL_RS11500	COG2255	four-way junction helicase activity
ABLL_RS11505	COG0628	permease
ABLL_RS11515	COG4628	conserved protein (DUF2132)
ABLL_RS11560	COG0731	radical SAM domain protein
ABLL_RS11565	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABLL_RS11575	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABLL_RS11590	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABLL_RS11600	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABLL_RS11615	COG0438	transferase activity, transferring glycosyl groups
ABLL_RS11630	COG0438	transferase activity, transferring glycosyl groups
ABLL_RS11635	COG0726	polysaccharide deacetylase
ABLL_RS11640	COG0438	transferase activity, transferring glycosyl groups
ABLL_RS11645	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABLL_RS11665	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABLL_RS11675	COG0493	'glutamate synthase
ABLL_RS11680	COG0070	glutamate synthase
ABLL_RS11680	COG0069	glutamate synthase activity
ABLL_RS11680	COG0067	glutamate synthase
ABLL_RS11690	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABLL_RS11695	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABLL_RS11710	COG0745	RESPONSE REGULATOR receiver
ABLL_RS11780	COG0284	orotidine-5'-phosphate decarboxylase activity
ABLL_RS11785	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABLL_RS11790	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABLL_RS11795	COG3706	GGDEF domain
ABLL_RS11800	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ABLL_RS11825	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABLL_RS11850	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABLL_RS11885	COG1459	type II secretion system
ABLL_RS11910	COG1739	Uncharacterized protein family UPF0029
ABLL_RS11920	COG0196	riboflavin kinase activity
ABLL_RS11925	COG2226	methyltransferase
ABLL_RS11930	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABLL_RS11940	COG0277	FAD linked oxidase domain protein
ABLL_RS11950	COG2203	Gaf domain
ABLL_RS11950	COG5001	Diguanylate cyclase
ABLL_RS11950	COG4251	negative regulation of phosphorylation
ABLL_RS11950	COG3706	GGDEF domain
ABLL_RS11990	COG0542	response to heat
ABLL_RS11995	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABLL_RS12000	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ABLL_RS12015	COG2030	dehydratase
ABLL_RS12040	COG1970	mechanosensitive ion channel activity
ABLL_RS12045	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABLL_RS12075	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABLL_RS12080	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABLL_RS12085	COG1157	protein secretion by the type III secretion system
ABLL_RS12095	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABLL_RS12115	COG1677	Flagellar hook-basal body complex protein FliE
ABLL_RS12125	COG0455	bacterial-type flagellum organization
ABLL_RS12130	COG1419	protein localization to endoplasmic reticulum
ABLL_RS12160	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABLL_RS12180	COG1749	Flagellar hook protein flgE
ABLL_RS12185	COG1749	Flagellar hook protein flgE
ABLL_RS12195	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABLL_RS12205	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABLL_RS12210	COG1766	The M ring may be actively involved in energy transduction
ABLL_RS12215	COG1815	bacterial-type flagellum-dependent cell motility
ABLL_RS12220	COG4786	Flagellar basal body rod
ABLL_RS12230	COG0745	RESPONSE REGULATOR receiver
ABLL_RS12250	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABLL_RS12260	COG0228	four-way junction DNA binding
ABLL_RS12265	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABLL_RS12270	COG0564	pseudouridine synthase activity
ABLL_RS12275	COG1519	Transferase
ABLL_RS12285	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABLL_RS12290	COG0752	glycyl-tRNA synthetase alpha subunit
ABLL_RS12300	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABLL_RS12310	COG0826	peptidase U32
ABLL_RS12315	COG0840	transmembrane signaling receptor activity
ABLL_RS12320	COG0497	DNA recombination
ABLL_RS12325	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABLL_RS12330	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABLL_RS12335	COG0049	tRNA binding
ABLL_RS12340	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABLL_RS12345	COG2814	Major facilitator Superfamily
ABLL_RS12355	COG0840	transmembrane signaling receptor activity
ABLL_RS12380	COG0310	cobalt ion transport
ABLL_RS12415	COG0077	Prephenate dehydratase
ABLL_RS12415	COG1605	Chorismate mutase
ABLL_RS12445	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABLL_RS12450	COG4569	acetaldehyde dehydrogenase (acetylating) activity
ABLL_RS12475	COG0543	2 iron, 2 sulfur cluster binding
ABLL_RS12475	COG0633	Ferredoxin
ABLL_RS12480	COG0039	L-malate dehydrogenase activity
ABLL_RS12490	COG0784	Response regulator, receiver
ABLL_RS12505	COG0730	response to heat
ABLL_RS12545	COG0745	RESPONSE REGULATOR receiver
ABLL_RS12550	COG0840	transmembrane signaling receptor activity
ABLL_RS12555	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS12560	COG0473	3-isopropylmalate dehydrogenase activity
ABLL_RS12575	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABLL_RS12580	COG0085	RNA polymerase activity
ABLL_RS12585	COG0222	ribosome binding
ABLL_RS12590	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABLL_RS12595	COG0081	regulation of translation
ABLL_RS12600	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABLL_RS12605	COG0250	Participates in transcription elongation, termination and antitermination
ABLL_RS12620	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABLL_RS12625	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABLL_RS12650	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABLL_RS12655	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABLL_RS12660	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABLL_RS12665	COG0444	Belongs to the ABC transporter superfamily
ABLL_RS12670	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ABLL_RS12675	COG0174	glutamine synthetase
ABLL_RS12690	COG0314	molybdopterin synthase activity
ABLL_RS12700	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
ABLL_RS12705	COG1968	undecaprenyl-diphosphatase activity
ABLL_RS12715	COG0772	Belongs to the SEDS family
ABLL_RS12720	COG0768	penicillin binding
ABLL_RS12725	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABLL_RS12765	COG0512	Glutamine amidotransferase of anthranilate synthase
ABLL_RS12770	COG1840	ABC-type Fe3 transport system, periplasmic component
ABLL_RS12775	COG1178	ABC-type Fe3 transport system permease component
ABLL_RS12780	COG3842	ATPase activity
ABLL_RS12820	COG2183	response to ionizing radiation
ABLL_RS12830	COG0251	oxidation-reduction process
ABLL_RS12845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABLL_RS12865	COG0335	large ribosomal subunit rRNA binding
ABLL_RS12870	COG0336	Belongs to the RNA methyltransferase TrmD family
ABLL_RS12880	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABLL_RS12885	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABLL_RS12890	COG0356	it plays a direct role in the translocation of protons across the membrane
ABLL_RS12900	COG1074	ATP-dependent DNA helicase activity
ABLL_RS12905	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABLL_RS12910	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABLL_RS12915	COG0723	plastoquinol--plastocyanin reductase activity
ABLL_RS12920	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ABLL_RS12935	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABLL_RS12945	COG0303	'Molybdopterin
ABLL_RS12950	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABLL_RS12960	COG0602	queuosine metabolic process
ABLL_RS12965	COG1028	Short-chain dehydrogenase reductase Sdr
ABLL_RS12970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABLL_RS12975	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABLL_RS12980	COG0825	malonyl-CoA metabolic process
ABLL_RS12985	COG0537	adenosine 5'-monophosphoramidase activity
ABLL_RS12990	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABLL_RS12995	COG0072	phenylalanine-tRNA ligase activity
ABLL_RS12995	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABLL_RS13000	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABLL_RS13005	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABLL_RS13010	COG1185	polyribonucleotide nucleotidyltransferase activity
ABLL_RS13010	COG0539	negative regulation of cytoplasmic translation
ABLL_RS13015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABLL_RS13020	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABLL_RS13025	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABLL_RS13025	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABLL_RS13030	COG0779	Required for maturation of 30S ribosomal subunits
ABLL_RS13035	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABLL_RS13040	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABLL_RS13050	COG0083	homoserine kinase activity
ABLL_RS13060	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ABLL_RS13075	COG0157	Belongs to the NadC ModD family
ABLL_RS13085	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABLL_RS13095	COG4773	Receptor
ABLL_RS13105	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ABLL_RS13125	COG1538	Outer membrane efflux protein
ABLL_RS13130	COG1846	Transcriptional regulator
ABLL_RS13170	COG3278	Belongs to the heme-copper respiratory oxidase family
ABLL_RS13175	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABLL_RS13180	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABLL_RS13185	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABLL_RS13190	COG0210	DNA helicase
ABLL_RS13200	COG1242	4 iron, 4 sulfur cluster binding
ABLL_RS13205	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ABLL_RS13210	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABLL_RS13215	COG0492	ferredoxin-NADP+ reductase activity
ABLL_RS13220	COG3118	belongs to the thioredoxin family
ABLL_RS13225	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABLL_RS13255	COG0791	NLP P60 protein
ABLL_RS13260	COG0791	NLP P60 protein
ABLL_RS13275	COG0697	spore germination
ABLL_RS13285	COG0424	maF-like protein
ABLL_RS13295	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABLL_RS13300	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABLL_RS13305	COG0077	Prephenate dehydratase
ABLL_RS13305	COG1605	Chorismate mutase
ABLL_RS13310	COG0019	diaminopimelate decarboxylase activity
ABLL_RS13315	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABLL_RS13320	COG0149	triose-phosphate isomerase activity
ABLL_RS13325	COG0126	phosphoglycerate kinase activity
ABLL_RS13335	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABLL_RS13345	COG0018	arginyl-trna synthetase
ABLL_RS13355	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABLL_RS13360	COG0204	Acyl-transferase
ABLL_RS13370	COG0047	phosphoribosylformylglycinamidine synthase activity
ABLL_RS13375	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABLL_RS13380	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABLL_RS13385	COG0793	Belongs to the peptidase S41A family
ABLL_RS13400	COG0585	pseudouridine synthase activity
ABLL_RS13415	COG1136	(ABC) transporter
ABLL_RS13465	COG0129	dihydroxy-acid dehydratase activity
ABLL_RS13475	COG0745	RESPONSE REGULATOR receiver
ABLL_RS13480	COG0642	Histidine kinase
ABLL_RS13495	COG0702	epimerase
ABLL_RS13510	COG1492	cobalamin metabolic process
ABLL_RS13515	COG2205	protein histidine kinase activity
ABLL_RS13535	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABLL_RS13540	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
ABLL_RS13550	COG2095	MarC family integral membrane protein
ABLL_RS13555	COG1083	cytidylyl-transferase
ABLL_RS13555	COG2755	lipolytic protein G-D-S-L family
ABLL_RS13560	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABLL_RS13575	COG4232	protein-disulfide reductase activity
ABLL_RS13580	COG3118	belongs to the thioredoxin family
ABLL_RS13590	COG0189	ligase activity
ABLL_RS13605	COG3287	FIST C domain
ABLL_RS13605	COG2200	EAL domain
ABLL_RS13605	COG2199	diguanylate cyclase activity
ABLL_RS13610	COG0688	phosphatidylethanolamine metabolic process
ABLL_RS13620	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ABLL_RS13630	COG0443	Heat shock 70 kDa protein
ABLL_RS13635	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABLL_RS13640	COG1420	regulation of RNA biosynthetic process
ABLL_RS13645	COG2358	TRAP transporter, solute receptor (TAXI family
ABLL_RS13655	COG2197	response regulator
ABLL_RS13665	COG0101	tRNA pseudouridine synthase activity
ABLL_RS13675	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ABLL_RS13680	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABLL_RS13685	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABLL_RS13690	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABLL_RS13705	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABLL_RS13725	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABLL_RS13730	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABLL_RS13740	COG2089	acid synthase
ABLL_RS13755	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABLL_RS13760	COG0148	phosphopyruvate hydratase activity
ABLL_RS13775	COG0475	glutathione-regulated potassium exporter activity
ABLL_RS13775	COG0569	domain protein
ABLL_RS13780	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABLL_RS13800	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
ABLL_RS13810	COG1007	ATP synthesis coupled electron transport
ABLL_RS13820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABLL_RS13825	COG0713	ATP synthesis coupled electron transport
ABLL_RS13830	COG0839	Belongs to the complex I subunit 6 family
ABLL_RS13835	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS13840	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABLL_RS13845	COG1034	ATP synthesis coupled electron transport
ABLL_RS13860	COG0649	NAD binding
ABLL_RS13870	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS13875	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABLL_RS13880	COG1222	aaa ATPase
ABLL_RS13910	COG0659	secondary active sulfate transmembrane transporter activity
ABLL_RS13920	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
ABLL_RS13925	COG1252	NADH dehydrogenase
ABLL_RS13930	COG0733	neurotransmitter:sodium symporter activity
ABLL_RS13940	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABLL_RS13950	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABLL_RS13955	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABLL_RS13960	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABLL_RS13980	COG0445	tRNA wobble uridine modification
ABLL_RS13995	COG0348	domain, Protein
ABLL_RS14000	COG0504	CTP synthase activity
ABLL_RS14005	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABLL_RS14005	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABLL_RS14020	COG0693	protein deglycase activity
ABLL_RS14035	COG0587	DNA-directed DNA polymerase activity
ABLL_RS14040	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABLL_RS14055	COG0315	cyclic pyranopterin monophosphate synthase activity
ABLL_RS14060	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABLL_RS14090	COG0670	Belongs to the BI1 family
ABLL_RS14095	COG0352	thiamine-phosphate diphosphorylase activity
ABLL_RS14105	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABLL_RS14115	COG0233	cytoplasmic translational termination
ABLL_RS14120	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABLL_RS14130	COG2814	Major facilitator Superfamily
ABLL_RS14135	COG1196	nuclear chromosome segregation
ABLL_RS14135	COG3264	Mechanosensitive ion channel
ABLL_RS14145	COG3022	response to hydroperoxide
ABLL_RS14150	COG3012	SEC-C Motif Domain Protein
ABLL_RS14180	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABLL_RS14195	COG1704	LemA family
ABLL_RS14210	COG0546	phosphoglycolate phosphatase activity
ABLL_RS14230	COG2814	Major facilitator Superfamily
ABLL_RS14245	COG0745	RESPONSE REGULATOR receiver
ABLL_RS14250	COG0840	transmembrane signaling receptor activity
ABLL_RS14280	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABLL_RS14310	COG2081	HI0933 family
ABLL_RS14340	COG1959	2 iron, 2 sulfur cluster binding
ABLL_RS14355	COG0175	sulfate reduction
ABLL_RS14360	COG0175	sulfate reduction
ABLL_RS14365	COG2895	sulfate adenylyltransferase (ATP) activity
ABLL_RS14375	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABLL_RS14380	COG1408	metallophosphoesterase
ABLL_RS14385	COG0071	Belongs to the small heat shock protein (HSP20) family
ABLL_RS14405	COG0840	transmembrane signaling receptor activity
ABLL_RS14415	COG4208	sulfate ABC transporter
ABLL_RS14420	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABLL_RS14425	COG2200	EAL domain
ABLL_RS14425	COG2199	diguanylate cyclase activity
ABLL_RS14425	COG3287	FIST C domain
ABLL_RS14430	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABLL_RS14435	COG1959	2 iron, 2 sulfur cluster binding
ABLL_RS14455	COG2308	Evidence 4 Homologs of previously reported genes of
ABLL_RS14460	COG1217	gtp-binding protein TYPA
ABLL_RS14475	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ABLL_RS14480	COG1858	cytochrome C peroxidase
ABLL_RS14505	COG0745	RESPONSE REGULATOR receiver
ABLL_RS14510	COG0642	Histidine kinase
ABLL_RS14515	COG2226	methyltransferase
ABLL_RS14525	COG3437	response regulator, receiver
ABLL_RS14525	COG0784	Response regulator, receiver
ABLL_RS14530	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
ABLL_RS14535	COG2066	Belongs to the glutaminase family
ABLL_RS14540	COG2860	membrane
ABLL_RS14550	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABLL_RS14555	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABLL_RS14615	COG3920	Histidine kinase
ABLL_RS14620	COG3706	GGDEF domain
ABLL_RS14630	COG5001	Diguanylate cyclase
ABLL_RS14630	COG2203	Gaf domain
ABLL_RS14630	COG4251	negative regulation of phosphorylation
ABLL_RS14630	COG3706	GGDEF domain
ABLL_RS14645	COG4191	Histidine kinase
ABLL_RS14665	COG2989	Protein conserved in bacteria
ABLL_RS14710	COG3437	response regulator, receiver
ABLL_RS14710	COG4999	Histidine kinase
ABLL_RS14710	COG3850	Histidine kinase
ABLL_RS14710	COG2205	protein histidine kinase activity
ABLL_RS14720	COG3710	Transcriptional regulator
ABLL_RS14745	COG3706	GGDEF domain
ABLL_RS14755	COG0745	RESPONSE REGULATOR receiver
ABLL_RS14775	COG3437	response regulator, receiver
ABLL_RS14820	COG4191	Histidine kinase
ABLL_RS14830	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ABLL_RS14830	COG0662	Cupin 2, conserved barrel domain protein
ABLL_RS14835	COG0784	Response regulator, receiver
ABLL_RS14835	COG3437	response regulator, receiver