locus-tag	class	description
ATH_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
ATH_RS00005	PF11638	DnaA N-terminal domain
ATH_RS00005	PF00308	Bacterial dnaA  protein
ATH_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
ATH_RS00010	PF02767	DNA polymerase III beta subunit, central domain
ATH_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
ATH_RS00015	PF00204	DNA gyrase B
ATH_RS00015	PF01751	Toprim domain
ATH_RS00015	PF00986	DNA gyrase B subunit, carboxyl terminus
ATH_RS00015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS00035	PF13649	Methyltransferase domain
ATH_RS00055	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS00055	PF00593	TonB dependent receptor
ATH_RS00055	PF07660	Secretin and TonB N terminus short domain
ATH_RS00060	PF00005	ABC transporter
ATH_RS00065	PF01032	FecCD transport family
ATH_RS00070	PF01497	Periplasmic binding protein
ATH_RS00075	PF00296	Luciferase-like monooxygenase
ATH_RS00085	PF00005	ABC transporter
ATH_RS00085	PF08402	TOBE domain
ATH_RS00090	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS00105	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATH_RS00105	PF03459	TOBE domain
ATH_RS00110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATH_RS00110	PF03466	LysR substrate binding domain
ATH_RS00120	PF00849	RNA pseudouridylate synthase
ATH_RS00125	PF10397	Adenylosuccinate lyase C-terminus
ATH_RS00125	PF00206	Lyase
ATH_RS00130	PF00317	Ribonucleotide reductase, all-alpha domain
ATH_RS00130	PF02867	Ribonucleotide reductase, barrel domain
ATH_RS00130	PF03477	ATP cone domain
ATH_RS00135	PF00268	Ribonucleotide reductase, small chain
ATH_RS00150	PF00107	Zinc-binding dehydrogenase
ATH_RS00150	PF08240	Alcohol dehydrogenase GroES-like domain
ATH_RS00155	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ATH_RS00155	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
ATH_RS00160	PF02934	GatB/GatE catalytic domain
ATH_RS00160	PF02637	GatB domain
ATH_RS00170	PF01872	RibD C-terminal domain
ATH_RS00170	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
ATH_RS00175	PF00364	Biotin-requiring enzyme
ATH_RS00180	PF02785	Biotin carboxylase C-terminal domain
ATH_RS00180	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATH_RS00180	PF00289	Biotin carboxylase, N-terminal domain
ATH_RS00185	PF00271	Helicase conserved C-terminal domain
ATH_RS00185	PF00270	DEAD/DEAH box helicase
ATH_RS00190	PF01384	Phosphate transporter family
ATH_RS00200	PF13537	Glutamine amidotransferase domain
ATH_RS00200	PF00733	Asparagine synthase
ATH_RS00210	PF02562	PhoH-like protein
ATH_RS00210	PF13638	PIN domain
ATH_RS00215	PF03653	Uncharacterised protein family (UPF0093)
ATH_RS00220	PF12002	MgsA AAA+ ATPase C terminal
ATH_RS00220	PF01661	Macro domain
ATH_RS00220	PF16193	AAA C-terminal domain
ATH_RS00220	PF05496	Holliday junction DNA helicase RuvB P-loop domain
ATH_RS00225	PF00849	RNA pseudouridylate synthase
ATH_RS00225	PF01479	S4 domain
ATH_RS00230	PF01380	SIS domain
ATH_RS00230	PF00571	CBS domain
ATH_RS00235	PF00753	Metallo-beta-lactamase superfamily
ATH_RS00235	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
ATH_RS00235	PF17770	Ribonuclease J C-terminal domain
ATH_RS00240	PF00398	Ribosomal RNA adenine dimethylase
ATH_RS00245	PF00977	Histidine biosynthesis protein
ATH_RS00260	PF04055	Radical SAM superfamily
ATH_RS00265	PF00749	tRNA synthetases class I (E and Q), catalytic domain
ATH_RS00270	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
ATH_RS00275	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS00275	PF00072	Response regulator receiver domain
ATH_RS00280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS00310	PF00873	AcrB/AcrD/AcrF family
ATH_RS00320	PF04264	YceI-like domain
ATH_RS00330	PF00857	Isochorismatase family
ATH_RS00335	PF01842	ACT domain
ATH_RS00335	PF00742	Homoserine dehydrogenase
ATH_RS00335	PF03447	Homoserine dehydrogenase, NAD binding domain
ATH_RS00340	PF00155	Aminotransferase class I and II
ATH_RS00350	PF00588	SpoU rRNA Methylase family
ATH_RS00350	PF08032	RNA 2'-O ribose methyltransferase substrate binding
ATH_RS00355	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATH_RS00360	PF01197	Ribosomal protein L31
ATH_RS00375	PF01040	UbiA prenyltransferase family
ATH_RS00385	PF12849	PBP superfamily domain
ATH_RS00390	PF00563	EAL domain
ATH_RS00390	PF12792	CSS motif domain associated with EAL 
ATH_RS00395	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS00400	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS00405	PF00005	ABC transporter
ATH_RS00420	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS00420	PF00072	Response regulator receiver domain
ATH_RS00425	PF08521	Two-component sensor kinase N-terminal
ATH_RS00425	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS00425	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS00430	PF01165	Ribosomal protein S21
ATH_RS00435	PF01967	MoaC family
ATH_RS00450	PF01975	Survival protein SurE
ATH_RS00455	PF02811	PHP domain
ATH_RS00455	PF14579	Helix-hairpin-helix motif
ATH_RS00455	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
ATH_RS00455	PF07733	Bacterial DNA polymerase III alpha NTPase domain
ATH_RS00475	PF01368	DHH family
ATH_RS00475	PF02272	DHHA1 domain
ATH_RS00475	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
ATH_RS00475	PF17768	RecJ OB domain
ATH_RS00480	PF06418	CTP synthase N-terminus
ATH_RS00480	PF00117	Glutamine amidotransferase class-I
ATH_RS00485	PF13746	4Fe-4S dicluster domain
ATH_RS00485	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
ATH_RS00485	PF12801	4Fe-4S binding domain
ATH_RS00495	PF01121	Dephospho-CoA kinase
ATH_RS00500	PF02769	AIR synthase related protein, C-terminal domain
ATH_RS00500	PF00586	AIR synthase related protein, N-terminal domain
ATH_RS00505	PF00989	PAS fold
ATH_RS00505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS00505	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS00510	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS00510	PF00072	Response regulator receiver domain
ATH_RS00515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATH_RS00525	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ATH_RS00525	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
ATH_RS00530	PF02678	Pirin
ATH_RS00530	PF17954	Quercetinase C-terminal cupin domain
ATH_RS00540	PF04264	YceI-like domain
ATH_RS00545	PF01047	MarR family
ATH_RS00550	PF00266	Aminotransferase class-V
ATH_RS00555	PF13393	Histidyl-tRNA synthetase
ATH_RS00560	PF00709	Adenylosuccinate synthetase
ATH_RS00570	PF00117	Glutamine amidotransferase class-I
ATH_RS00570	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
ATH_RS00575	PF04608	Phosphatidylglycerophosphatase A
ATH_RS00585	PF02542	YgbB family
ATH_RS00585	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
ATH_RS00595	PF01883	Iron-sulfur cluster assembly protein
ATH_RS00595	PF10609	NUBPL iron-transfer P-loop NTPase
ATH_RS00605	PF06339	Ectoine synthase
ATH_RS00610	PF00202	Aminotransferase class-III
ATH_RS00615	PF00583	Acetyltransferase (GNAT) family
ATH_RS00630	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
ATH_RS00630	PF01502	Phosphoribosyl-AMP cyclohydrolase
ATH_RS00645	PF01063	Amino-transferase class IV
ATH_RS00655	PF02607	B12 binding domain
ATH_RS00655	PF00809	Pterin binding enzyme
ATH_RS00655	PF02574	Homocysteine S-methyltransferase
ATH_RS00655	PF02310	B12 binding domain
ATH_RS00655	PF02965	Vitamin B12 dependent methionine synthase, activation domain
ATH_RS00670	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
ATH_RS00670	PF01266	FAD dependent oxidoreductase
ATH_RS00675	PF02664	S-Ribosylhomocysteinase (LuxS)
ATH_RS00700	PF02405	Permease MlaE
ATH_RS00705	PF00005	ABC transporter
ATH_RS00705	PF09383	NIL domain
ATH_RS00725	PF13419	Haloacid dehalogenase-like hydrolase
ATH_RS00730	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
ATH_RS00740	PF01964	Radical SAM ThiC family
ATH_RS00750	PF00899	ThiF family
ATH_RS00755	PF05690	Thiazole biosynthesis protein ThiG
ATH_RS00760	PF04055	Radical SAM superfamily
ATH_RS00760	PF06968	Biotin and Thiamin Synthesis associated domain
ATH_RS00765	PF17792	ThiD2 family
ATH_RS00765	PF02581	Thiamine monophosphate synthase
ATH_RS00770	PF08543	Phosphomethylpyrimidine kinase
ATH_RS00770	PF02581	Thiamine monophosphate synthase
ATH_RS00775	PF00380	Ribosomal protein S9/S16
ATH_RS00780	PF00572	Ribosomal protein L13
ATH_RS00785	PF03462	PCRF domain
ATH_RS00785	PF00472	RF-1 domain
ATH_RS00790	PF01649	Ribosomal protein S20
ATH_RS00795	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
ATH_RS00795	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ATH_RS00795	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
ATH_RS00795	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
ATH_RS00800	PF01252	Signal peptidase (SPase) II
ATH_RS00805	PF00330	Aconitase family (aconitate hydratase)
ATH_RS00810	PF12804	MobA-like NTP transferase domain
ATH_RS00830	PF00453	Ribosomal protein L20
ATH_RS00835	PF01632	Ribosomal protein L35
ATH_RS00840	PF05198	Translation initiation factor IF-3, N-terminal domain
ATH_RS00840	PF00707	Translation initiation factor IF-3, C-terminal domain
ATH_RS00845	PF03129	Anticodon binding domain
ATH_RS00845	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATH_RS00845	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
ATH_RS00885	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
ATH_RS00885	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
ATH_RS00885	PF13288	DXP reductoisomerase C-terminal domain
ATH_RS00900	PF00814	Glycoprotease family
ATH_RS00965	PF00364	Biotin-requiring enzyme
ATH_RS00975	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS00975	PF00672	HAMP domain
ATH_RS00975	PF02203	Tar ligand binding domain homologue
ATH_RS00980	PF00456	Transketolase, thiamine diphosphate binding domain
ATH_RS00980	PF02780	Transketolase, C-terminal domain
ATH_RS00980	PF02779	Transketolase, pyrimidine binding domain
ATH_RS00985	PF03788	LrgA family
ATH_RS00990	PF04172	LrgB-like family 
ATH_RS01000	PF01553	Acyltransferase
ATH_RS01000	PF00501	AMP-binding enzyme
ATH_RS01005	PF01451	Low molecular weight phosphotyrosine protein phosphatase
ATH_RS01010	PF01022	Bacterial regulatory protein, arsR family
ATH_RS01015	PF02040	Arsenical pump membrane protein
ATH_RS01020	PF02417	Chromate transporter
ATH_RS01030	PF00543	Nitrogen regulatory protein P-II
ATH_RS01040	PF02154	Flagellar motor switch protein FliM
ATH_RS01040	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
ATH_RS01045	PF02119	Flagellar P-ring protein
ATH_RS01055	PF01313	Bacterial export proteins, family 3
ATH_RS01080	PF02107	Flagellar L-ring protein
ATH_RS01095	PF02561	Flagellar protein FliS
ATH_RS01105	PF01171	PP-loop family
ATH_RS01110	PF00919	Uncharacterized protein family UPF0004
ATH_RS01110	PF18693	TRAM domain
ATH_RS01110	PF04055	Radical SAM superfamily
ATH_RS01120	PF02569	Pantoate-beta-alanine ligase
ATH_RS01125	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS01130	PF01648	4'-phosphopantetheinyl transferase superfamily
ATH_RS01140	PF03616	Sodium/glutamate symporter
ATH_RS01145	PF03652	Holliday junction resolvase
ATH_RS01150	PF02219	Methylenetetrahydrofolate reductase
ATH_RS01150	PF02574	Homocysteine S-methyltransferase
ATH_RS01160	PF00923	Transaldolase/Fructose-6-phosphate aldolase
ATH_RS01165	PF01474	Class-II DAHP synthetase family
ATH_RS01170	PF03960	ArsC family
ATH_RS01175	PF02686	Glu-tRNAGln amidotransferase C subunit
ATH_RS01180	PF01702	Queuine tRNA-ribosyltransferase
ATH_RS01190	PF08245	Mur ligase middle domain
ATH_RS01190	PF02875	Mur ligase family, glutamate ligase domain
ATH_RS01190	PF01225	Mur ligase family, catalytic domain
ATH_RS01195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATH_RS01195	PF03466	LysR substrate binding domain
ATH_RS01200	PF13361	UvrD-like helicase C-terminal domain
ATH_RS01200	PF00580	UvrD/REP helicase N-terminal domain
ATH_RS01205	PF01509	TruB family pseudouridylate synthase (N terminal domain)
ATH_RS01210	PF00288	GHMP kinases N terminal domain
ATH_RS01215	PF01668	SmpB protein
ATH_RS01220	PF00115	Cytochrome C and Quinol oxidase polypeptide I
ATH_RS01235	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
ATH_RS01235	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
ATH_RS01260	PF01569	PAP2 superfamily
ATH_RS01280	PF03462	PCRF domain
ATH_RS01280	PF00472	RF-1 domain
ATH_RS01295	PF02660	Glycerol-3-phosphate acyltransferase
ATH_RS01300	PF02445	Quinolinate synthetase A protein
ATH_RS01305	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
ATH_RS01305	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
ATH_RS01310	PF02272	DHHA1 domain
ATH_RS01310	PF01368	DHH family
ATH_RS01320	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
ATH_RS01330	PF08544	GHMP kinases C terminal 
ATH_RS01330	PF00288	GHMP kinases N terminal domain
ATH_RS01340	PF11987	Translation-initiation factor 2
ATH_RS01340	PF04760	Translation initiation factor IF-2, N-terminal region
ATH_RS01340	PF00009	Elongation factor Tu GTP binding domain
ATH_RS01345	PF02033	Ribosome-binding factor A
ATH_RS01350	PF02576	RimP N-terminal domain
ATH_RS01355	PF01872	RibD C-terminal domain
ATH_RS01355	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
ATH_RS01360	PF01132	Elongation factor P (EF-P) OB domain
ATH_RS01360	PF08207	Elongation factor P (EF-P) KOW-like domain
ATH_RS01360	PF09285	Elongation factor P, C-terminal
ATH_RS01365	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ATH_RS01365	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ATH_RS01365	PF01842	ACT domain
ATH_RS01370	PF00575	S1 RNA binding domain
ATH_RS01375	PF02401	LytB protein
ATH_RS01380	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
ATH_RS01385	PF01588	Putative tRNA binding domain
ATH_RS01385	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
ATH_RS01385	PF03147	Ferredoxin-fold anticodon binding domain
ATH_RS01385	PF03484	tRNA synthetase B5 domain
ATH_RS01390	PF01409	tRNA synthetases class II core domain (F)
ATH_RS01390	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
ATH_RS01395	PF01230	HIT domain
ATH_RS01405	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
ATH_RS01410	PF00109	Beta-ketoacyl synthase, N-terminal domain
ATH_RS01410	PF02801	Beta-ketoacyl synthase, C-terminal domain
ATH_RS01415	PF00550	Phosphopantetheine attachment site
ATH_RS01435	PF04452	RNA methyltransferase
ATH_RS01445	PF00033	Cytochrome b/b6/petB
ATH_RS01445	PF00032	Cytochrome b(C-terminal)/b6/petD
ATH_RS01450	PF00355	Rieske [2Fe-2S] domain
ATH_RS01455	PF00291	Pyridoxal-phosphate dependent enzyme
ATH_RS01460	PF00696	Amino acid kinase family
ATH_RS01465	PF13361	UvrD-like helicase C-terminal domain
ATH_RS01465	PF00580	UvrD/REP helicase N-terminal domain
ATH_RS01470	PF00119	ATP synthase A chain
ATH_RS01475	PF13291	ACT domain
ATH_RS01475	PF00291	Pyridoxal-phosphate dependent enzyme
ATH_RS01480	PF01717	Cobalamin-independent synthase, Catalytic domain
ATH_RS01480	PF08267	Cobalamin-independent synthase, N-terminal domain
ATH_RS01490	PF01746	tRNA (Guanine-1)-methyltransferase
ATH_RS01495	PF01245	Ribosomal protein L19
ATH_RS01500	PF09335	SNARE associated Golgi protein
ATH_RS01510	PF00155	Aminotransferase class I and II
ATH_RS01520	PF01042	Endoribonuclease L-PSP
ATH_RS01540	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
ATH_RS01540	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
ATH_RS01560	PF00593	TonB dependent receptor
ATH_RS01560	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS01570	PF00005	ABC transporter
ATH_RS01575	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS01580	PF13416	Bacterial extracellular solute-binding protein
ATH_RS01585	PF00117	Glutamine amidotransferase class-I
ATH_RS01600	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS01605	PF00005	ABC transporter
ATH_RS01620	PF00593	TonB dependent receptor
ATH_RS01620	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS01635	PF00164	Ribosomal protein S12/S23
ATH_RS01640	PF00177	Ribosomal protein S7p/S5e
ATH_RS01645	PF03764	Elongation factor G, domain IV
ATH_RS01645	PF03144	Elongation factor Tu domain 2
ATH_RS01645	PF14492	Elongation Factor G, domain II
ATH_RS01645	PF00009	Elongation factor Tu GTP binding domain
ATH_RS01645	PF00679	Elongation factor G C-terminus
ATH_RS01650	PF01513	ATP-NAD kinase
ATH_RS01655	PF13476	AAA domain
ATH_RS01660	PF17200	Single Cache domain 2
ATH_RS01660	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS01660	PF00672	HAMP domain
ATH_RS01665	PF01136	Peptidase family U32
ATH_RS01675	PF00731	AIR carboxylase
ATH_RS01685	PF02091	Glycyl-tRNA synthetase alpha subunit
ATH_RS01690	PF01784	NIF3 (NGG1p interacting factor 3)
ATH_RS01700	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
ATH_RS01700	PF02390	Putative methyltransferase 
ATH_RS01705	PF00849	RNA pseudouridylate synthase
ATH_RS01710	PF02881	SRP54-type protein, helical bundle domain
ATH_RS01710	PF00448	SRP54-type protein, GTPase domain
ATH_RS01710	PF02978	Signal peptide binding domain
ATH_RS01715	PF00886	Ribosomal protein S16
ATH_RS01725	PF01782	RimM N-terminal domain
ATH_RS01740	PF00460	Flagella basal body rod protein
ATH_RS01740	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATH_RS01745	PF00072	Response regulator receiver domain
ATH_RS01755	PF00460	Flagella basal body rod protein
ATH_RS01755	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATH_RS01760	PF00460	Flagella basal body rod protein
ATH_RS01765	PF08345	Flagellar M-ring protein C-terminal
ATH_RS01765	PF01514	Secretory protein of YscJ/FliF family
ATH_RS01770	PF14842	FliG N-terminal domain
ATH_RS01770	PF14841	FliG middle domain
ATH_RS01770	PF01706	FliG C-terminal domain
ATH_RS01780	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
ATH_RS01790	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATH_RS01790	PF00460	Flagella basal body rod protein
ATH_RS01790	PF07196	Flagellin hook IN motif
ATH_RS01790	PF07559	Flagellar basal body protein FlaE
ATH_RS01815	PF16973	Flagellar motor switch protein FliN N-terminal
ATH_RS01815	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
ATH_RS01835	PF00448	SRP54-type protein, GTPase domain
ATH_RS01840	PF10609	NUBPL iron-transfer P-loop NTPase
ATH_RS01850	PF02049	Flagellar hook-basal body complex protein FliE
ATH_RS01855	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
ATH_RS01855	PF00460	Flagella basal body rod protein
ATH_RS01870	PF01312	FlhB HrpN YscU SpaS Family
ATH_RS01880	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATH_RS01880	PF18269	T3SS EscN ATPase C-terminal domain
ATH_RS01890	PF00771	FHIPEP family
ATH_RS01900	PF01613	Flavin reductase like domain
ATH_RS01915	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
ATH_RS01920	PF00557	Metallopeptidase family M24
ATH_RS01920	PF01321	Creatinase/Prolidase N-terminal domain
ATH_RS01925	PF01220	Dehydroquinase class II
ATH_RS01930	PF01979	Amidohydrolase family
ATH_RS01935	PF01343	Peptidase family S49
ATH_RS01940	PF00871	Acetokinase family
ATH_RS01945	PF01515	Phosphate acetyl/butaryl transferase
ATH_RS01950	PF00871	Acetokinase family
ATH_RS01955	PF00929	Exonuclease
ATH_RS01965	PF00474	Sodium:solute symporter family
ATH_RS01975	PF00474	Sodium:solute symporter family
ATH_RS01995	PF00474	Sodium:solute symporter family
ATH_RS02000	PF00072	Response regulator receiver domain
ATH_RS02000	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS02005	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS02005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS02050	PF00994	Probable molybdopterin binding domain
ATH_RS02050	PF02464	Competence-damaged protein
ATH_RS02050	PF18146	Damage-inducible protein CinA KH domain
ATH_RS02055	PF06039	Malate:quinone oxidoreductase (Mqo)
ATH_RS02060	PF08264	Anticodon-binding domain of tRNA
ATH_RS02060	PF00133	tRNA synthetases class I (I, L, M and V)
ATH_RS02075	PF02875	Mur ligase family, glutamate ligase domain
ATH_RS02075	PF08245	Mur ligase middle domain
ATH_RS02080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS02080	PF08447	PAS fold
ATH_RS02085	PF00672	HAMP domain
ATH_RS02085	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS02085	PF02203	Tar ligand binding domain homologue
ATH_RS02090	PF00318	Ribosomal protein S2
ATH_RS02095	PF00889	Elongation factor TS
ATH_RS02100	PF00005	ABC transporter
ATH_RS02110	PF00625	Guanylate kinase
ATH_RS02115	PF12833	Helix-turn-helix domain
ATH_RS02115	PF00072	Response regulator receiver domain
ATH_RS02120	PF00403	Heavy-metal-associated domain
ATH_RS02135	PF00005	ABC transporter
ATH_RS02140	PF00762	Ferrochelatase
ATH_RS02150	PF00459	Inositol monophosphatase family
ATH_RS02155	PF01380	SIS domain
ATH_RS02160	PF00438	S-adenosylmethionine synthetase, N-terminal domain
ATH_RS02160	PF02772	S-adenosylmethionine synthetase, central domain
ATH_RS02160	PF02773	S-adenosylmethionine synthetase, C-terminal domain
ATH_RS02165	PF17848	Acetyl-coA carboxylase zinc finger domain
ATH_RS02165	PF01039	Carboxyl transferase domain
ATH_RS02170	PF02581	Thiamine monophosphate synthase
ATH_RS02175	PF02590	Predicted SPOUT methyltransferase
ATH_RS02185	PF01207	Dihydrouridine synthase (Dus)
ATH_RS02195	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS02195	PF17862	AAA+ lid domain
ATH_RS02195	PF01434	Peptidase family M41
ATH_RS02200	PF08502	LeuA allosteric (dimerisation) domain
ATH_RS02200	PF00682	HMGL-like
ATH_RS02220	PF10414	Sirohaem synthase dimerisation region
ATH_RS02220	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATH_RS02235	PF00977	Histidine biosynthesis protein
ATH_RS02240	PF00117	Glutamine amidotransferase class-I
ATH_RS02255	PF00156	Phosphoribosyl transferase domain
ATH_RS02290	PF06421	GTP-binding protein LepA C-terminus
ATH_RS02290	PF03144	Elongation factor Tu domain 2
ATH_RS02290	PF00009	Elongation factor Tu GTP binding domain
ATH_RS02290	PF00679	Elongation factor G C-terminus
ATH_RS02300	PF00403	Heavy-metal-associated domain
ATH_RS02305	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
ATH_RS02305	PF14572	Phosphoribosyl synthetase-associated domain
ATH_RS02330	PF01575	MaoC like domain
ATH_RS02335	PF00501	AMP-binding enzyme
ATH_RS02335	PF13193	AMP-binding enzyme C-terminal domain
ATH_RS02350	PF02617	ATP-dependent Clp protease adaptor protein ClpS
ATH_RS02355	PF17871	AAA lid domain
ATH_RS02355	PF02861	Clp amino terminal domain, pathogenicity island component
ATH_RS02355	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATH_RS02355	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS02355	PF07724	AAA domain (Cdc48 subfamily)
ATH_RS02395	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
ATH_RS02400	PF00905	Penicillin binding protein transpeptidase domain
ATH_RS02400	PF03717	Penicillin-binding Protein dimerisation domain
ATH_RS02405	PF01098	Cell cycle protein
ATH_RS02410	PF03033	Glycosyltransferase family 28 N-terminal domain
ATH_RS02410	PF04101	Glycosyltransferase family 28 C-terminal domain
ATH_RS02430	PF01966	HD domain
ATH_RS02470	PF02673	Bacitracin resistance protein BacA
ATH_RS02475	PF02621	Menaquinone biosynthesis
ATH_RS02485	PF02391	MoaE protein
ATH_RS02495	PF03951	Glutamine synthetase, beta-Grasp domain
ATH_RS02495	PF00120	Glutamine synthetase, catalytic domain
ATH_RS02520	PF00133	tRNA synthetases class I (I, L, M and V)
ATH_RS02520	PF08264	Anticodon-binding domain of tRNA
ATH_RS02520	PF10458	Valyl tRNA synthetase tRNA binding arm
ATH_RS02525	PF07690	Major Facilitator Superfamily
ATH_RS02530	PF01725	Ham1 family
ATH_RS02550	PF03807	NADP oxidoreductase coenzyme F420-dependent
ATH_RS02550	PF14748	Pyrroline-5-carboxylate reductase dimerisation
ATH_RS02555	PF13525	Outer membrane lipoprotein
ATH_RS02560	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
ATH_RS02560	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS02560	PF05362	Lon protease (S16) C-terminal proteolytic domain
ATH_RS02570	PF01351	Ribonuclease HII
ATH_RS02575	PF12704	MacB-like periplasmic core domain
ATH_RS02575	PF00005	ABC transporter
ATH_RS02575	PF02687	FtsX-like permease family
ATH_RS02580	PF02687	FtsX-like permease family
ATH_RS02580	PF00005	ABC transporter
ATH_RS02580	PF12704	MacB-like periplasmic core domain
ATH_RS02595	PF01618	MotA/TolQ/ExbB proton channel family
ATH_RS02600	PF02472	Biopolymer transport protein ExbD/TolR
ATH_RS02605	PF03544	Gram-negative bacterial TonB protein C-terminal
ATH_RS02615	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATH_RS02615	PF00289	Biotin carboxylase, N-terminal domain
ATH_RS02615	PF02785	Biotin carboxylase C-terminal domain
ATH_RS02620	PF05538	Campylobacter major outer membrane protein
ATH_RS02630	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ 
ATH_RS02640	PF17871	AAA lid domain
ATH_RS02640	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATH_RS02640	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS02640	PF02861	Clp amino terminal domain, pathogenicity island component
ATH_RS02640	PF07724	AAA domain (Cdc48 subfamily)
ATH_RS02645	PF00468	Ribosomal protein L34
ATH_RS02650	PF00825	Ribonuclease P
ATH_RS02655	PF01809	Putative membrane protein insertion efficiency factor
ATH_RS02660	PF14849	YidC periplasmic domain
ATH_RS02660	PF02096	60Kd inner membrane protein
ATH_RS02670	PF12631	MnmE helical domain
ATH_RS02670	PF10396	GTP-binding protein TrmE N-terminus
ATH_RS02670	PF01926	50S ribosome-binding GTPase
ATH_RS02675	PF00300	Histidine phosphatase superfamily (branch 1)
ATH_RS02680	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS02680	PF07694	5TMR of 5TMR-LYT
ATH_RS02685	PF01435	Peptidase family M48
ATH_RS02695	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
ATH_RS02700	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
ATH_RS02705	PF00425	chorismate binding enzyme
ATH_RS02705	PF04715	Anthranilate synthase component I, N terminal region
ATH_RS02715	PF00464	Serine hydroxymethyltransferase
ATH_RS02720	PF00152	tRNA synthetases class II (D, K and N) 
ATH_RS02720	PF01336	OB-fold nucleic acid binding domain
ATH_RS02730	PF04551	GcpE protein
ATH_RS02735	PF00772	DnaB-like helicase N terminal domain
ATH_RS02735	PF03796	DnaB-like helicase C terminal domain
ATH_RS02740	PF07963	Prokaryotic N-terminal methylation motif
ATH_RS02740	PF08334	Type II secretion system (T2SS), protein G
ATH_RS02745	PF00593	TonB dependent receptor
ATH_RS02745	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS02750	PF00593	TonB dependent receptor
ATH_RS02750	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS02755	PF13847	Methyltransferase domain
ATH_RS02775	PF02554	Carbon starvation protein CstA
ATH_RS02775	PF13722	5TM C-terminal transporter carbon starvation CstA
ATH_RS02780	PF06071	Protein of unknown function (DUF933)
ATH_RS02780	PF01926	50S ribosome-binding GTPase
ATH_RS02800	PF06865	Pyrimidine/purine nucleoside phosphorylase
ATH_RS02805	PF02769	AIR synthase related protein, C-terminal domain
ATH_RS02805	PF00586	AIR synthase related protein, N-terminal domain
ATH_RS02810	PF01142	tRNA pseudouridine synthase D (TruD)
ATH_RS02820	PF12729	Four helix bundle sensory module for signal transduction
ATH_RS02820	PF00672	HAMP domain
ATH_RS02820	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS02825	PF07499	RuvA, C-terminal domain
ATH_RS02825	PF01330	RuvA N terminal domain
ATH_RS02830	PF01820	D-ala D-ala ligase N-terminus
ATH_RS02830	PF07478	D-ala D-ala ligase C-terminus
ATH_RS02840	PF02875	Mur ligase family, glutamate ligase domain
ATH_RS02840	PF08245	Mur ligase middle domain
ATH_RS02845	PF01230	HIT domain
ATH_RS02860	PF00873	AcrB/AcrD/AcrF family
ATH_RS02865	PF00529	HlyD membrane-fusion protein of T1SS
ATH_RS02865	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATH_RS02880	PF02348	Cytidylyltransferase
ATH_RS02885	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
ATH_RS02885	PF00476	DNA polymerase family A
ATH_RS02885	PF01367	5'-3' exonuclease, C-terminal SAM fold
ATH_RS02905	PF01118	Semialdehyde dehydrogenase, NAD binding domain
ATH_RS02910	PF01625	Peptide methionine sulfoxide reductase
ATH_RS02910	PF01641	SelR domain
ATH_RS02910	PF08534	Redoxin
ATH_RS02925	PF06426	Serine acetyltransferase, N-terminal 
ATH_RS02925	PF00132	Bacterial transferase hexapeptide (six repeats)
ATH_RS02930	PF17944	Arginine decarboxylase C-terminal helical extension
ATH_RS02930	PF17810	Arginine decarboxylase helical bundle domain
ATH_RS02930	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
ATH_RS02935	PF03129	Anticodon binding domain
ATH_RS02935	PF13393	Histidyl-tRNA synthetase
ATH_RS02940	PF02223	Thymidylate kinase
ATH_RS02955	PF01467	Cytidylyltransferase-like
ATH_RS02960	PF02441	Flavoprotein
ATH_RS02970	PF01281	Ribosomal protein L9, N-terminal domain
ATH_RS02970	PF03948	Ribosomal protein L9, C-terminal domain
ATH_RS02975	PF00227	Proteasome subunit
ATH_RS02980	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATH_RS02980	PF07724	AAA domain (Cdc48 subfamily)
ATH_RS02990	PF01026	TatD related DNase
ATH_RS02995	PF05036	Sporulation related domain
ATH_RS02995	PF03330	Lytic transglycolase
ATH_RS03000	PF00475	Imidazoleglycerol-phosphate dehydratase
ATH_RS03020	PF01926	50S ribosome-binding GTPase
ATH_RS03025	PF00583	Acetyltransferase (GNAT) family
ATH_RS03035	PF00338	Ribosomal protein S10p/S20e
ATH_RS03040	PF00297	Ribosomal protein L3
ATH_RS03045	PF00573	Ribosomal protein L4/L1 family
ATH_RS03050	PF00276	Ribosomal protein L23
ATH_RS03055	PF00181	Ribosomal Proteins L2, RNA binding domain
ATH_RS03055	PF03947	Ribosomal Proteins L2, C-terminal domain
ATH_RS03060	PF00203	Ribosomal protein S19
ATH_RS03065	PF00237	Ribosomal protein L22p/L17e
ATH_RS03070	PF00189	Ribosomal protein S3, C-terminal domain
ATH_RS03070	PF07650	KH domain
ATH_RS03075	PF00252	Ribosomal protein L16p/L10e
ATH_RS03080	PF00831	Ribosomal L29 protein
ATH_RS03085	PF00366	Ribosomal protein S17
ATH_RS03090	PF00238	Ribosomal protein L14p/L23e
ATH_RS03095	PF00467	KOW motif
ATH_RS03095	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
ATH_RS03100	PF00281	Ribosomal protein L5
ATH_RS03100	PF00673	ribosomal L5P family C-terminus
ATH_RS03105	PF00253	Ribosomal protein S14p/S29e
ATH_RS03110	PF00410	Ribosomal protein S8
ATH_RS03115	PF00347	Ribosomal protein L6
ATH_RS03120	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
ATH_RS03125	PF03719	Ribosomal protein S5, C-terminal domain
ATH_RS03125	PF00333	Ribosomal protein S5, N-terminal domain
ATH_RS03130	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
ATH_RS03135	PF00344	SecY translocase
ATH_RS03140	PF00557	Metallopeptidase family M24
ATH_RS03145	PF01176	Translation initiation factor 1A / IF-1
ATH_RS03160	PF00152	tRNA synthetases class II (D, K and N) 
ATH_RS03160	PF01336	OB-fold nucleic acid binding domain
ATH_RS03160	PF02938	GAD domain
ATH_RS03165	PF08497	Radical SAM N-terminal
ATH_RS03165	PF04055	Radical SAM superfamily
ATH_RS03170	PF05191	Adenylate kinase, active site lid
ATH_RS03195	PF00302	Chloramphenicol acetyltransferase
ATH_RS03200	PF00155	Aminotransferase class I and II
ATH_RS03205	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03205	PF00672	HAMP domain
ATH_RS03205	PF12729	Four helix bundle sensory module for signal transduction
ATH_RS03210	PF01168	Alanine racemase, N-terminal domain
ATH_RS03210	PF00842	Alanine racemase, C-terminal domain
ATH_RS03215	PF08459	UvrC Helix-hairpin-helix N-terminal
ATH_RS03215	PF02151	UvrB/uvrC motif
ATH_RS03215	PF01541	GIY-YIG catalytic domain
ATH_RS03220	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03220	PF00672	HAMP domain
ATH_RS03220	PF02203	Tar ligand binding domain homologue
ATH_RS03225	PF06628	Catalase-related immune-responsive
ATH_RS03225	PF00199	Catalase
ATH_RS03230	PF00023	Ankyrin repeat
ATH_RS03230	PF12796	Ankyrin repeats (3 copies)
ATH_RS03235	PF00873	AcrB/AcrD/AcrF family
ATH_RS03240	PF00873	AcrB/AcrD/AcrF family
ATH_RS03245	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATH_RS03255	PF11849	Domain of unknown function (DUF3369)
ATH_RS03260	PF00813	FliP family
ATH_RS03265	PF00905	Penicillin binding protein transpeptidase domain
ATH_RS03265	PF03717	Penicillin-binding Protein dimerisation domain
ATH_RS03285	PF09383	NIL domain
ATH_RS03285	PF00005	ABC transporter
ATH_RS03290	PF02390	Putative methyltransferase 
ATH_RS03300	PF00849	RNA pseudouridylate synthase
ATH_RS03300	PF01479	S4 domain
ATH_RS03305	PF01098	Cell cycle protein
ATH_RS03320	PF03591	AzlC protein
ATH_RS03330	PF00202	Aminotransferase class-III
ATH_RS03335	PF06865	Pyrimidine/purine nucleoside phosphorylase
ATH_RS03350	PF02203	Tar ligand binding domain homologue
ATH_RS03350	PF00672	HAMP domain
ATH_RS03350	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03355	PF04542	Sigma-70 region 2 
ATH_RS03355	PF04539	Sigma-70 region 3
ATH_RS03355	PF04545	Sigma-70, region 4
ATH_RS03355	PF00140	Sigma-70 factor, region 1.2
ATH_RS03360	PF00694	Aconitase C-terminal domain
ATH_RS03365	PF00180	Isocitrate/isopropylmalate dehydrogenase
ATH_RS03380	PF00444	Ribosomal protein L36
ATH_RS03385	PF00416	Ribosomal protein S13/S18
ATH_RS03390	PF00411	Ribosomal protein S11
ATH_RS03395	PF01479	S4 domain
ATH_RS03395	PF00163	Ribosomal protein S4/S9 N-terminal domain
ATH_RS03400	PF01000	RNA polymerase Rpb3/RpoA insert domain
ATH_RS03400	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
ATH_RS03400	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
ATH_RS03405	PF01196	Ribosomal protein L17
ATH_RS03410	PF01425	Amidase
ATH_RS03415	PF00478	IMP dehydrogenase / GMP reductase domain
ATH_RS03415	PF00571	CBS domain
ATH_RS03420	PF02203	Tar ligand binding domain homologue
ATH_RS03420	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03420	PF00672	HAMP domain
ATH_RS03425	PF02646	RmuC family
ATH_RS03435	PF01556	DnaJ C terminal domain
ATH_RS03435	PF00226	DnaJ domain
ATH_RS03435	PF00684	DnaJ central domain
ATH_RS03445	PF00933	Glycosyl hydrolase family 3 N terminal domain
ATH_RS03450	PF01022	Bacterial regulatory protein, arsR family
ATH_RS03455	PF00403	Heavy-metal-associated domain
ATH_RS03460	PF01545	Cation efflux family
ATH_RS03460	PF16916	Dimerisation domain of Zinc Transporter
ATH_RS03470	PF03062	MBOAT, membrane-bound O-acyltransferase family
ATH_RS03490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATH_RS03490	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
ATH_RS03495	PF02817	e3 binding domain
ATH_RS03495	PF00364	Biotin-requiring enzyme
ATH_RS03495	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
ATH_RS03500	PF17831	Pyruvate dehydrogenase E1 component middle domain
ATH_RS03500	PF00456	Transketolase, thiamine diphosphate binding domain
ATH_RS03505	PF03099	Biotin/lipoate A/B protein ligase family
ATH_RS03505	PF10437	Bacterial lipoate protein ligase C-terminus
ATH_RS03510	PF04055	Radical SAM superfamily
ATH_RS03515	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding
ATH_RS03515	PF18381	YcaO cyclodehydratase C-terminal domain
ATH_RS03520	PF03475	3-alpha domain
ATH_RS03520	PF03473	MOSC domain
ATH_RS03525	PF00202	Aminotransferase class-III
ATH_RS03530	PF00392	Bacterial regulatory proteins, gntR family
ATH_RS03530	PF00155	Aminotransferase class I and II
ATH_RS03535	PF01243	Pyridoxamine 5'-phosphate oxidase
ATH_RS03540	PF03594	Benzoate membrane transport protein
ATH_RS03560	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
ATH_RS03560	PF02805	Metal binding domain of Ada
ATH_RS03560	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
ATH_RS03560	PF12833	Helix-turn-helix domain
ATH_RS03565	PF00464	Serine hydroxymethyltransferase
ATH_RS03590	PF01883	Iron-sulfur cluster assembly protein
ATH_RS03595	PF02657	Fe-S metabolism associated domain
ATH_RS03600	PF00266	Aminotransferase class-V
ATH_RS03610	PF00005	ABC transporter
ATH_RS03615	PF01458	Uncharacterized protein family (UPF0051)
ATH_RS03620	PF01592	NifU-like N terminal domain
ATH_RS03620	PF01106	NifU-like domain
ATH_RS03620	PF04324	BFD-like [2Fe-2S] binding domain
ATH_RS03630	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS03635	PF00206	Lyase
ATH_RS03635	PF14698	Argininosuccinate lyase C-terminal
ATH_RS03640	PF00072	Response regulator receiver domain
ATH_RS03640	PF01584	CheW-like domain
ATH_RS03645	PF00899	ThiF family
ATH_RS03650	PF03449	Transcription elongation factor, N-terminal
ATH_RS03650	PF01272	Transcription elongation factor, GreA/GreB, C-term
ATH_RS03660	PF12344	Ultra-violet resistance protein B
ATH_RS03660	PF00271	Helicase conserved C-terminal domain
ATH_RS03660	PF04851	Type III restriction enzyme, res subunit
ATH_RS03660	PF17757	UvrB interaction domain
ATH_RS03660	PF02151	UvrB/uvrC motif
ATH_RS03665	PF11849	Domain of unknown function (DUF3369)
ATH_RS03670	PF00360	Phytochrome region
ATH_RS03670	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS03670	PF00563	EAL domain
ATH_RS03670	PF01590	GAF domain
ATH_RS03675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS03675	PF09308	LuxQ, periplasmic
ATH_RS03675	PF00072	Response regulator receiver domain
ATH_RS03675	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS03680	PF10576	Iron-sulfur binding domain of endonuclease III
ATH_RS03680	PF00730	HhH-GPD superfamily base excision DNA repair protein
ATH_RS03680	PF00633	Helix-hairpin-helix motif
ATH_RS03695	PF02502	Ribose/Galactose Isomerase
ATH_RS03700	PF10502	Signal peptidase, peptidase S26 
ATH_RS03705	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
ATH_RS03705	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
ATH_RS03710	PF01386	Ribosomal L25p family
ATH_RS03710	PF14693	Ribosomal protein TL5, C-terminal domain
ATH_RS03715	PF01195	Peptidyl-tRNA hydrolase
ATH_RS03730	PF01520	N-acetylmuramoyl-L-alanine amidase
ATH_RS03740	PF01479	S4 domain
ATH_RS03740	PF00579	tRNA synthetases class I (W and Y)
ATH_RS03745	PF02824	TGS domain
ATH_RS03745	PF04607	Region found in RelA / SpoT proteins
ATH_RS03745	PF13291	ACT domain
ATH_RS03750	PF01192	RNA polymerase Rpb6 
ATH_RS03755	PF00696	Amino acid kinase family
ATH_RS03795	PF06965	Na+/H+ antiporter 1
ATH_RS03810	PF03824	High-affinity nickel-transport protein
ATH_RS03825	PF17760	UvrA interaction domain
ATH_RS03825	PF17755	UvrA DNA-binding domain
ATH_RS03830	PF02203	Tar ligand binding domain homologue
ATH_RS03830	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03830	PF00672	HAMP domain
ATH_RS03835	PF08447	PAS fold
ATH_RS03835	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS03860	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATH_RS03865	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATH_RS03870	PF14743	DNA ligase OB-like domain
ATH_RS03870	PF01068	ATP dependent DNA ligase domain
ATH_RS03875	PF00156	Phosphoribosyl transferase domain
ATH_RS03880	PF00291	Pyridoxal-phosphate dependent enzyme
ATH_RS03890	PF02789	Cytosol aminopeptidase family, N-terminal domain
ATH_RS03890	PF00883	Cytosol aminopeptidase family, catalytic domain
ATH_RS03895	PF03466	LysR substrate binding domain
ATH_RS03895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATH_RS03900	PF01361	Tautomerase enzyme
ATH_RS03910	PF04225	Opacity-associated protein A LysM-like domain
ATH_RS03910	PF01551	Peptidase family M23
ATH_RS03920	PF00005	ABC transporter
ATH_RS03920	PF12848	ABC transporter
ATH_RS03920	PF16326	ABC transporter C-terminal domain
ATH_RS03930	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS03930	PF00072	Response regulator receiver domain
ATH_RS03945	PF05860	haemagglutination activity domain
ATH_RS03970	PF00682	HMGL-like
ATH_RS03975	PF00075	RNase H
ATH_RS03990	PF00664	ABC transporter transmembrane region
ATH_RS03990	PF00005	ABC transporter
ATH_RS04000	PF00561	alpha/beta hydrolase fold
ATH_RS04015	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
ATH_RS04025	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
ATH_RS04035	PF00117	Glutamine amidotransferase class-I
ATH_RS04035	PF02540	NAD synthase
ATH_RS04035	PF00958	GMP synthase C terminal domain
ATH_RS04040	PF00890	FAD binding domain
ATH_RS04050	PF01863	Protein of unknown function DUF45
ATH_RS04055	PF00155	Aminotransferase class I and II
ATH_RS04065	PF10672	S-adenosylmethionine-dependent methyltransferase
ATH_RS04065	PF17785	PUA-like domain
ATH_RS04070	PF02254	TrkA-N domain
ATH_RS04070	PF00999	Sodium/hydrogen exchanger family
ATH_RS04080	PF02600	Disulfide bond formation protein DsbB
ATH_RS04095	PF02769	AIR synthase related protein, C-terminal domain
ATH_RS04095	PF00586	AIR synthase related protein, N-terminal domain
ATH_RS04100	PF01841	Transglutaminase-like superfamily
ATH_RS04125	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS04125	PF00593	TonB dependent receptor
ATH_RS04140	PF00072	Response regulator receiver domain
ATH_RS04140	PF02954	Bacterial regulatory protein, Fis family
ATH_RS04140	PF00158	Sigma-54 interaction domain
ATH_RS04145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS04145	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS04175	PF13247	4Fe-4S dicluster domain
ATH_RS04185	PF02634	FdhD/NarQ family
ATH_RS04195	PF00994	Probable molybdopterin binding domain
ATH_RS04195	PF03454	MoeA C-terminal region (domain IV)
ATH_RS04195	PF03453	MoeA N-terminal region (domain I and II)
ATH_RS04205	PF03480	Bacterial extracellular solute-binding protein, family 7
ATH_RS04210	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
ATH_RS04215	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
ATH_RS04220	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS04220	PF00989	PAS fold
ATH_RS04220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS04225	PF00072	Response regulator receiver domain
ATH_RS04230	PF10518	TAT (twin-arginine translocation) pathway signal sequence
ATH_RS04230	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATH_RS04230	PF09242	Flavocytochrome c sulphide dehydrogenase, flavin-binding
ATH_RS04285	PF00145	C-5 cytosine-specific DNA methylase
ATH_RS04325	PF14659	Phage integrase, N-terminal SAM-like domain
ATH_RS04325	PF00589	Phage integrase family
ATH_RS04330	PF03061	Thioesterase superfamily
ATH_RS04335	PF13396	Phospholipase_D-nuclease N-terminal
ATH_RS04335	PF13091	PLD-like domain
ATH_RS04340	PF01435	Peptidase family M48
ATH_RS04340	PF16491	CAAX prenyl protease N-terminal, five membrane helices
ATH_RS04350	PF00994	Probable molybdopterin binding domain
ATH_RS04350	PF03453	MoeA N-terminal region (domain I and II)
ATH_RS04350	PF03454	MoeA C-terminal region (domain IV)
ATH_RS04360	PF01171	PP-loop family
ATH_RS04370	PF00384	Molybdopterin oxidoreductase
ATH_RS04370	PF01568	Molydopterin dinucleotide binding domain
ATH_RS04370	PF18364	Molybdopterin oxidoreductase N-terminal domain
ATH_RS04380	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS04380	PF00072	Response regulator receiver domain
ATH_RS04390	PF08448	PAS fold
ATH_RS04390	PF08447	PAS fold
ATH_RS04390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS04415	PF02541	Ppx/GppA phosphatase family
ATH_RS04425	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
ATH_RS04425	PF00205	Thiamine pyrophosphate enzyme, central domain
ATH_RS04425	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ATH_RS04430	PF10369	Small subunit of acetolactate synthase
ATH_RS04435	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
ATH_RS04435	PF00132	Bacterial transferase hexapeptide (six repeats)
ATH_RS04440	PF01580	FtsK/SpoIIIE family
ATH_RS04440	PF09397	Ftsk gamma domain
ATH_RS04440	PF17854	FtsK alpha domain
ATH_RS04445	PF07669	Eco57I restriction-modification methylase
ATH_RS04475	PF01761	3-dehydroquinate synthase
ATH_RS04485	PF00919	Uncharacterized protein family UPF0004
ATH_RS04485	PF04055	Radical SAM superfamily
ATH_RS04490	PF17862	AAA+ lid domain
ATH_RS04490	PF06480	FtsH Extracellular
ATH_RS04490	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS04490	PF01434	Peptidase family M41
ATH_RS04500	PF00994	Probable molybdopterin binding domain
ATH_RS04505	PF00005	ABC transporter
ATH_RS04510	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
ATH_RS04525	PF08338	Domain of unknown function (DUF1731)
ATH_RS04525	PF01370	NAD dependent epimerase/dehydratase family
ATH_RS04530	PF03441	FAD binding domain of DNA photolyase
ATH_RS04530	PF00875	DNA photolyase
ATH_RS04535	PF00488	MutS domain V
ATH_RS04535	PF01713	Smr domain
ATH_RS04540	PF01595	Cyclin M transmembrane N-terminal domain
ATH_RS04540	PF00571	CBS domain
ATH_RS04540	PF03471	Transporter associated domain
ATH_RS04545	PF02253	Phospholipase A1
ATH_RS04550	PF00834	Ribulose-phosphate 3 epimerase family
ATH_RS04555	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
ATH_RS04560	PF14579	Helix-hairpin-helix motif
ATH_RS04560	PF00929	Exonuclease
ATH_RS04560	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
ATH_RS04560	PF07733	Bacterial DNA polymerase III alpha NTPase domain
ATH_RS04560	PF11490	DNA polymerase III polC-type N-terminus II
ATH_RS04560	PF14480	DNA polymerase III polC-type N-terminus I
ATH_RS04560	PF02811	PHP domain
ATH_RS04565	PF01578	Cytochrome C assembly protein
ATH_RS04565	PF05140	ResB-like family 
ATH_RS04570	PF07687	Peptidase dimerisation domain
ATH_RS04570	PF01546	Peptidase family M20/M25/M40
ATH_RS04575	PF08003	Protein of unknown function (DUF1698)
ATH_RS04580	PF00563	EAL domain
ATH_RS04580	PF08448	PAS fold
ATH_RS04580	PF08447	PAS fold
ATH_RS04580	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS04585	PF00753	Metallo-beta-lactamase superfamily
ATH_RS04590	PF04305	Protein of unknown function (DUF455)
ATH_RS04600	PF00684	DnaJ central domain
ATH_RS04600	PF01556	DnaJ C terminal domain
ATH_RS04600	PF00226	DnaJ domain
ATH_RS04605	PF02132	RecR protein
ATH_RS04605	PF13662	Toprim domain
ATH_RS04630	PF00248	Aldo/keto reductase family
ATH_RS04660	PF00925	GTP cyclohydrolase II
ATH_RS04660	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
ATH_RS04665	PF01293	Phosphoenolpyruvate carboxykinase
ATH_RS04670	PF02436	Conserved carboxylase domain
ATH_RS04670	PF00682	HMGL-like
ATH_RS04670	PF00364	Biotin-requiring enzyme
ATH_RS04690	PF00133	tRNA synthetases class I (I, L, M and V)
ATH_RS04690	PF09334	tRNA synthetases class I (M)
ATH_RS04690	PF01588	Putative tRNA binding domain
ATH_RS04700	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
ATH_RS04725	PF00749	tRNA synthetases class I (E and Q), catalytic domain
ATH_RS04730	PF05193	Peptidase M16 inactive domain
ATH_RS04735	PF04055	Radical SAM superfamily
ATH_RS04740	PF07244	Surface antigen variable number repeat
ATH_RS04740	PF01103	Surface antigen
ATH_RS04745	PF02153	Prephenate dehydrogenase
ATH_RS04745	PF01842	ACT domain
ATH_RS04750	PF00809	Pterin binding enzyme
ATH_RS04765	PF13840	ACT domain 
ATH_RS04765	PF01842	ACT domain
ATH_RS04765	PF00696	Amino acid kinase family
ATH_RS04770	PF00293	NUDIX domain
ATH_RS04775	PF06969	HemN C-terminal domain
ATH_RS04775	PF04055	Radical SAM superfamily
ATH_RS04780	PF05175	Methyltransferase small domain
ATH_RS04780	PF17827	PrmC N-terminal domain
ATH_RS04785	PF01432	Peptidase family M3
ATH_RS04800	PF18644	Phage integrase SAM-like domain
ATH_RS04800	PF00589	Phage integrase family
ATH_RS04810	PF00072	Response regulator receiver domain
ATH_RS04810	PF01339	CheB methylesterase
ATH_RS04815	PF03975	CheD chemotactic sensory transduction
ATH_RS04820	PF01739	CheR methyltransferase, SAM binding domain
ATH_RS04820	PF03705	CheR methyltransferase, all-alpha domain
ATH_RS04825	PF01584	CheW-like domain
ATH_RS04825	PF09078	CheY binding
ATH_RS04825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS04825	PF02895	Signal transducing histidine kinase, homodimeric domain
ATH_RS04825	PF01627	Hpt domain
ATH_RS04830	PF00072	Response regulator receiver domain
ATH_RS04835	PF03725	3' exoribonuclease family, domain 2
ATH_RS04835	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
ATH_RS04835	PF01138	3' exoribonuclease family, domain 1
ATH_RS04835	PF00013	KH domain
ATH_RS04835	PF00575	S1 RNA binding domain
ATH_RS04845	PF04453	LPS transport system D
ATH_RS04845	PF03968	OstA-like protein
ATH_RS04855	PF02843	Phosphoribosylglycinamide synthetase, C domain
ATH_RS04855	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATH_RS04855	PF02844	Phosphoribosylglycinamide synthetase, N domain
ATH_RS04865	PF01926	50S ribosome-binding GTPase
ATH_RS04865	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
ATH_RS04875	PF01032	FecCD transport family
ATH_RS04880	PF00005	ABC transporter
ATH_RS04885	PF01497	Periplasmic binding protein
ATH_RS04890	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS04890	PF00593	TonB dependent receptor
ATH_RS04900	PF13419	Haloacid dehalogenase-like hydrolase
ATH_RS04905	PF00849	RNA pseudouridylate synthase
ATH_RS04905	PF01479	S4 domain
ATH_RS04910	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
ATH_RS04930	PF01145	SPFH domain / Band 7 family
ATH_RS04940	PF13426	PAS domain
ATH_RS04940	PF00672	HAMP domain
ATH_RS04940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS04940	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS04945	PF00072	Response regulator receiver domain
ATH_RS04945	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS04955	PF02690	Na+/Pi-cotransporter
ATH_RS04965	PF05525	Branched-chain amino acid transport protein
ATH_RS04970	PF00588	SpoU rRNA Methylase family
ATH_RS04975	PF00551	Formyl transferase
ATH_RS04975	PF01842	ACT domain
ATH_RS04980	PF01515	Phosphate acetyl/butaryl transferase
ATH_RS04980	PF03949	Malic enzyme, NAD binding domain
ATH_RS04980	PF00390	Malic enzyme, N-terminal domain
ATH_RS04985	PF02578	Multi-copper polyphenol oxidoreductase laccase
ATH_RS04995	PF08501	Shikimate dehydrogenase substrate binding domain
ATH_RS05000	PF00929	Exonuclease
ATH_RS05000	PF13307	Helicase C-terminal domain
ATH_RS05005	PF02547	Queuosine biosynthesis protein
ATH_RS05010	PF00902	Sec-independent protein translocase protein (TatC)
ATH_RS05015	PF02416	mttA/Hcf106 family
ATH_RS05020	PF05099	Tellurite resistance protein TerB
ATH_RS05020	PF00226	DnaJ domain
ATH_RS05035	PF02540	NAD synthase
ATH_RS05040	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
ATH_RS05045	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
ATH_RS05050	PF02028	BCCT, betaine/carnitine/choline family transporter
ATH_RS05060	PF02754	Cysteine-rich domain
ATH_RS05060	PF02665	Nitrate reductase gamma subunit
ATH_RS05060	PF13183	4Fe-4S dicluster domain
ATH_RS05065	PF01790	Prolipoprotein diacylglyceryl transferase
ATH_RS05080	PF02203	Tar ligand binding domain homologue
ATH_RS05080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS05080	PF00672	HAMP domain
ATH_RS05095	PF04461	Protein of unknown function (DUF520)
ATH_RS05100	PF04241	Protein of unknown function (DUF423)
ATH_RS05105	PF00156	Phosphoribosyl transferase domain
ATH_RS05120	PF13597	Anaerobic ribonucleoside-triphosphate reductase
ATH_RS05120	PF03477	ATP cone domain
ATH_RS05125	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
ATH_RS05125	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
ATH_RS05130	PF06969	HemN C-terminal domain
ATH_RS05130	PF04055	Radical SAM superfamily
ATH_RS05140	PF01113	Dihydrodipicolinate reductase, N-terminus
ATH_RS05140	PF16654	Diaminopimelic acid dehydrogenase C-terminal domain
ATH_RS05150	PF16363	GDP-mannose 4,6 dehydratase
ATH_RS05160	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
ATH_RS05170	PF02397	Bacterial sugar transferase
ATH_RS05175	PF00535	Glycosyl transferase family 2
ATH_RS05190	PF05199	GMC oxidoreductase
ATH_RS05190	PF00732	GMC oxidoreductase
ATH_RS05195	PF04991	LicD family
ATH_RS05210	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
ATH_RS05225	PF16363	GDP-mannose 4,6 dehydratase
ATH_RS05235	PF04321	RmlD substrate binding domain
ATH_RS05240	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
ATH_RS05250	PF02092	Glycyl-tRNA synthetase beta subunit
ATH_RS05265	PF02527	rRNA small subunit methyltransferase G
ATH_RS05270	PF00925	GTP cyclohydrolase II
ATH_RS05275	PF00490	Delta-aminolevulinic acid dehydratase
ATH_RS05280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS05280	PF08447	PAS fold
ATH_RS05280	PF08448	PAS fold
ATH_RS05285	PF00072	Response regulator receiver domain
ATH_RS05285	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS05290	PF11791	Aconitate B N-terminal domain
ATH_RS05290	PF06434	Aconitate hydratase 2 N-terminus
ATH_RS05290	PF00330	Aconitase family (aconitate hydratase)
ATH_RS05295	PF01709	Transcriptional regulator
ATH_RS05300	PF01551	Peptidase family M23
ATH_RS05300	PF08525	Opacity-associated protein A N-terminal motif
ATH_RS05300	PF01476	LysM domain
ATH_RS05310	PF03641	Possible lysine decarboxylase
ATH_RS05320	PF01312	FlhB HrpN YscU SpaS Family
ATH_RS05335	PF00106	short chain dehydrogenase
ATH_RS05340	PF00528	Binding-protein-dependent transport system inner membrane component
ATH_RS05340	PF12911	N-terminal TM domain of oligopeptide transport permease C
ATH_RS05350	PF12072	Domain of unknown function (DUF3552)
ATH_RS05350	PF01966	HD domain
ATH_RS05350	PF00013	KH domain
ATH_RS05360	PF00578	AhpC/TSA family
ATH_RS05365	PF00448	SRP54-type protein, GTPase domain
ATH_RS05375	PF18073	Rubredoxin metal binding domain
ATH_RS05380	PF03741	Integral membrane protein TerC family
ATH_RS05385	PF00218	Indole-3-glycerol phosphate synthase
ATH_RS05395	PF03692	Putative zinc- or iron-chelating domain
ATH_RS05400	PF05175	Methyltransferase small domain
ATH_RS05410	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
ATH_RS05410	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
ATH_RS05410	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
ATH_RS05415	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ATH_RS05435	PF03548	Outer membrane lipoprotein carrier protein LolA
ATH_RS05440	PF02810	SEC-C motif
ATH_RS05440	PF07517	SecA DEAD-like domain
ATH_RS05440	PF01043	SecA preprotein cross-linking domain
ATH_RS05440	PF00271	Helicase conserved C-terminal domain
ATH_RS05440	PF07516	SecA Wing and Scaffold domain
ATH_RS05445	PF02687	FtsX-like permease family
ATH_RS05445	PF12704	MacB-like periplasmic core domain
ATH_RS05460	PF03971	Monomeric isocitrate dehydrogenase
ATH_RS05465	PF00056	lactate/malate dehydrogenase, NAD binding domain
ATH_RS05465	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
ATH_RS05490	PF01795	MraW methylase family
ATH_RS05500	PF00216	Bacterial DNA-binding protein
ATH_RS05510	PF00533	BRCA1 C Terminus (BRCT) domain
ATH_RS05510	PF01653	NAD-dependent DNA ligase adenylation domain
ATH_RS05510	PF03120	NAD-dependent DNA ligase OB-fold domain
ATH_RS05510	PF12826	Helix-hairpin-helix motif
ATH_RS05540	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
ATH_RS05540	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
ATH_RS05540	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
ATH_RS05540	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ATH_RS05545	PF00483	Nucleotidyl transferase
ATH_RS05550	PF00342	Phosphoglucose isomerase
ATH_RS05570	PF03372	Endonuclease/Exonuclease/phosphatase family
ATH_RS05580	PF17674	HHH domain
ATH_RS05580	PF00575	S1 RNA binding domain
ATH_RS05580	PF09371	Tex-like protein N-terminal domain
ATH_RS05580	PF16921	Tex protein YqgF-like domain
ATH_RS05590	PF00132	Bacterial transferase hexapeptide (six repeats)
ATH_RS05595	PF00764	Arginosuccinate synthase
ATH_RS05600	PF01479	S4 domain
ATH_RS05605	PF00591	Glycosyl transferase family, a/b domain
ATH_RS05605	PF02885	Glycosyl transferase family, helical bundle domain
ATH_RS05615	PF12399	Branched-chain amino acid ATP-binding cassette transporter
ATH_RS05615	PF00005	ABC transporter
ATH_RS05660	PF00437	Type II/IV secretion system protein
ATH_RS05690	PF00005	ABC transporter
ATH_RS05690	PF16326	ABC transporter C-terminal domain
ATH_RS05690	PF12848	ABC transporter
ATH_RS05695	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
ATH_RS05695	PF14602	Hexapeptide repeat of succinyl-transferase
ATH_RS05700	PF00270	DEAD/DEAH box helicase
ATH_RS05700	PF17764	3′ DNA-binding domain (3′BD)
ATH_RS05700	PF00271	Helicase conserved C-terminal domain
ATH_RS05700	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
ATH_RS05700	PF18074	Primosomal protein N C-terminal domain
ATH_RS05770	PF09827	CRISPR associated protein Cas2
ATH_RS05775	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
ATH_RS05775	PF01348	Type II intron maturase
ATH_RS05830	PF12823	Domain of unknown function (DUF3817)
ATH_RS05840	PF02926	THUMP domain
ATH_RS05840	PF02568	Thiamine biosynthesis protein (ThiI)
ATH_RS05860	PF01205	Uncharacterized protein family UPF0029
ATH_RS05860	PF09186	Domain of unknown function (DUF1949)
ATH_RS05865	PF01728	FtsJ-like methyltransferase
ATH_RS05865	PF01479	S4 domain
ATH_RS05870	PF01687	Riboflavin kinase
ATH_RS05870	PF06574	FAD synthetase
ATH_RS05875	PF13649	Methyltransferase domain
ATH_RS05880	PF00578	AhpC/TSA family
ATH_RS05890	PF01565	FAD binding domain 
ATH_RS05890	PF02913	FAD linked oxidases, C-terminal domain
ATH_RS05895	PF03631	Virulence factor BrkB
ATH_RS05905	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
ATH_RS05915	PF00793	DAHP synthetase I family
ATH_RS05920	PF09827	CRISPR associated protein Cas2
ATH_RS05925	PF01867	CRISPR associated protein Cas1
ATH_RS05930	PF13395	HNH endonuclease
ATH_RS05930	PF18541	RuvC endonuclease subdomain 3
ATH_RS05935	PF00885	6,7-dimethyl-8-ribityllumazine synthase
ATH_RS05940	PF01029	NusB family
ATH_RS05945	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
ATH_RS05990	PF13614	AAA domain
ATH_RS06010	PF02384	N-6 DNA Methylase
ATH_RS06090	PF04231	Endonuclease I
ATH_RS06110	PF00216	Bacterial DNA-binding protein
ATH_RS06120	PF00817	impB/mucB/samB family
ATH_RS06120	PF11798	IMS family HHH motif
ATH_RS06120	PF11799	impB/mucB/samB family C-terminal domain
ATH_RS06210	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ 
ATH_RS06220	PF00589	Phage integrase family
ATH_RS06220	PF02899	Phage integrase, N-terminal SAM-like domain
ATH_RS06235	PF12167	Arm DNA-binding domain
ATH_RS06235	PF00589	Phage integrase family
ATH_RS06240	PF00313	'Cold-shock' DNA-binding domain
ATH_RS06285	PF09962	Uncharacterized conserved protein (DUF2196)
ATH_RS06300	PF11799	impB/mucB/samB family C-terminal domain
ATH_RS06300	PF00817	impB/mucB/samB family
ATH_RS06300	PF11798	IMS family HHH motif
ATH_RS06310	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ATH_RS06310	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATH_RS06310	PF02142	MGS-like domain
ATH_RS06320	PF00561	alpha/beta hydrolase fold
ATH_RS06330	PF04143	Sulphur transport
ATH_RS06335	PF12327	FtsZ family, C-terminal domain
ATH_RS06335	PF00091	Tubulin/FtsZ family, GTPase domain
ATH_RS06340	PF02491	SHS2 domain inserted in FTSA
ATH_RS06350	PF13538	UvrD-like helicase C-terminal domain
ATH_RS06350	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
ATH_RS06350	PF14490	Helix-hairpin-helix containing domain
ATH_RS06360	PF03960	ArsC family
ATH_RS06365	PF00270	DEAD/DEAH box helicase
ATH_RS06365	PF00271	Helicase conserved C-terminal domain
ATH_RS06375	PF03738	Glutathionylspermidine synthase preATP-grasp
ATH_RS06380	PF03061	Thioesterase superfamily
ATH_RS06385	PF12848	ABC transporter
ATH_RS06385	PF00005	ABC transporter
ATH_RS06395	PF00881	Nitroreductase family
ATH_RS06415	PF02770	Acyl-CoA dehydrogenase, middle domain
ATH_RS06415	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
ATH_RS06415	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ATH_RS06425	PF03601	Conserved hypothetical protein 698
ATH_RS06430	PF03466	LysR substrate binding domain
ATH_RS06430	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ATH_RS06435	PF08241	Methyltransferase domain
ATH_RS06440	PF12833	Helix-turn-helix domain
ATH_RS06490	PF00589	Phage integrase family
ATH_RS06490	PF13356	Arm DNA-binding domain
ATH_RS06495	PF00893	Small Multidrug Resistance protein
ATH_RS06500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS06505	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS06505	PF00072	Response regulator receiver domain
ATH_RS06515	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
ATH_RS06525	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
ATH_RS06525	PF01266	FAD dependent oxidoreductase
ATH_RS06530	PF01556	DnaJ C terminal domain
ATH_RS06530	PF00226	DnaJ domain
ATH_RS06535	PF13411	MerR HTH family regulatory protein
ATH_RS06540	PF02130	Uncharacterized protein family UPF0054
ATH_RS06555	PF03023	Lipid II flippase MurJ
ATH_RS06560	PF00005	ABC transporter
ATH_RS06560	PF00664	ABC transporter transmembrane region
ATH_RS06565	PF01180	Dihydroorotate dehydrogenase
ATH_RS06570	PF05193	Peptidase M16 inactive domain
ATH_RS06570	PF00675	Insulinase (Peptidase family M16)
ATH_RS06575	PF00701	Dihydrodipicolinate synthetase family
ATH_RS06585	PF01066	CDP-alcohol phosphatidyltransferase
ATH_RS06590	PF17820	PDZ domain
ATH_RS06590	PF02163	Peptidase family M50
ATH_RS06595	PF01168	Alanine racemase, N-terminal domain
ATH_RS06600	PF02203	Tar ligand binding domain homologue
ATH_RS06600	PF00672	HAMP domain
ATH_RS06600	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS06605	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS06605	PF08447	PAS fold
ATH_RS06615	PF00171	Aldehyde dehydrogenase family
ATH_RS06625	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
ATH_RS06625	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
ATH_RS06640	PF00258	Flavodoxin
ATH_RS06645	PF01475	Ferric uptake regulator family
ATH_RS06655	PF02421	Ferrous iron transport protein B
ATH_RS06655	PF07670	Nucleoside recognition
ATH_RS06655	PF07664	Ferrous iron transport protein B C terminus
ATH_RS06660	PF04377	Arginine-tRNA-protein transferase, C terminus
ATH_RS06660	PF04376	Arginine-tRNA-protein transferase, N terminus
ATH_RS06665	PF00290	Tryptophan synthase alpha chain
ATH_RS06670	PF02548	Ketopantoate hydroxymethyltransferase
ATH_RS06675	PF05496	Holliday junction DNA helicase RuvB P-loop domain
ATH_RS06675	PF05491	RuvB C-terminal winged helix domain
ATH_RS06675	PF17864	RuvB AAA lid domain
ATH_RS06680	PF01594	AI-2E family transporter
ATH_RS06760	PF08774	VRR-NUC domain
ATH_RS06760	PF04851	Type III restriction enzyme, res subunit
ATH_RS06770	PF18273	Type III R-M EcoP15I C-terminal domain
ATH_RS06770	PF01555	DNA methylase
ATH_RS06795	PF07730	Histidine kinase
ATH_RS06795	PF17200	Single Cache domain 2
ATH_RS06800	PF00994	Probable molybdopterin binding domain
ATH_RS06820	PF06067	Domain of unknown function (DUF932)
ATH_RS06840	PF01979	Amidohydrolase family
ATH_RS06845	PF13427	Domain of unknown function (DUF4111)
ATH_RS06845	PF01909	Nucleotidyltransferase domain
ATH_RS06850	PF01979	Amidohydrolase family
ATH_RS06860	PF01227	GTP cyclohydrolase I
ATH_RS06865	PF01544	CorA-like Mg2+ transporter protein
ATH_RS06875	PF00437	Type II/IV secretion system protein
ATH_RS06890	PF07650	KH domain
ATH_RS06890	PF01926	50S ribosome-binding GTPase
ATH_RS06895	PF01078	Magnesium chelatase, subunit ChlI
ATH_RS06895	PF13335	Magnesium chelatase, subunit ChlI C-terminal
ATH_RS06905	PF01327	Polypeptide deformylase
ATH_RS06910	PF00574	Clp protease
ATH_RS06915	PF05698	Bacterial trigger factor protein (TF) C-terminus
ATH_RS06915	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATH_RS06915	PF05697	Bacterial trigger factor protein (TF)
ATH_RS06920	PF03976	Polyphosphate kinase 2 (PPK2)
ATH_RS06925	PF03976	Polyphosphate kinase 2 (PPK2)
ATH_RS06930	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
ATH_RS06935	PF16653	Saccharopine dehydrogenase C-terminal domain
ATH_RS06935	PF03435	Saccharopine dehydrogenase NADP binding domain
ATH_RS06945	PF03150	Di-haem cytochrome c peroxidase
ATH_RS06950	PF04116	Fatty acid hydroxylase superfamily
ATH_RS06975	PF00137	ATP synthase subunit C
ATH_RS07020	PF01208	Uroporphyrinogen decarboxylase (URO-D)
ATH_RS07030	PF02774	Semialdehyde dehydrogenase, dimerisation domain
ATH_RS07030	PF01118	Semialdehyde dehydrogenase, NAD binding domain
ATH_RS07035	PF00521	DNA gyrase/topoisomerase IV, subunit A
ATH_RS07035	PF03989	DNA gyrase C-terminal domain, beta-propeller
ATH_RS07045	PF01960	ArgJ family
ATH_RS07055	PF00830	Ribosomal L28 family
ATH_RS07065	PF08645	Polynucleotide kinase 3 phosphatase
ATH_RS07070	PF01370	NAD dependent epimerase/dehydratase family
ATH_RS07075	PF00294	pfkB family carbohydrate kinase
ATH_RS07075	PF01467	Cytidylyltransferase-like
ATH_RS07080	PF13580	SIS domain
ATH_RS07085	PF00884	Sulfatase
ATH_RS07090	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
ATH_RS07100	PF00884	Sulfatase
ATH_RS07105	PF00535	Glycosyl transferase family 2
ATH_RS07120	PF00535	Glycosyl transferase family 2
ATH_RS07130	PF11893	Domain of unknown function (DUF3413)
ATH_RS07130	PF00884	Sulfatase
ATH_RS07135	PF01219	Prokaryotic diacylglycerol kinase
ATH_RS07145	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
ATH_RS07155	PF00037	4Fe-4S binding domain
ATH_RS07160	PF00459	Inositol monophosphatase family
ATH_RS07175	PF00263	Bacterial type II and III secretion system protein
ATH_RS07175	PF03958	Bacterial type II/III secretion system short domain
ATH_RS07180	PF00293	NUDIX domain
ATH_RS07190	PF00989	PAS fold
ATH_RS07190	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS07190	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS07195	PF07660	Secretin and TonB N terminus short domain
ATH_RS07195	PF00593	TonB dependent receptor
ATH_RS07195	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS07265	PF03841	L-seryl-tRNA selenium transferase
ATH_RS07270	PF09106	Elongation factor SelB, winged helix 
ATH_RS07270	PF09105	Elongation factor SelB, winged helix 
ATH_RS07270	PF03144	Elongation factor Tu domain 2
ATH_RS07270	PF09107	Elongation factor SelB, winged helix 
ATH_RS07270	PF00009	Elongation factor Tu GTP binding domain
ATH_RS07315	PF10442	FIST C domain
ATH_RS07315	PF00563	EAL domain
ATH_RS07315	PF08495	FIST N domain
ATH_RS07315	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS07320	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
ATH_RS07320	PF01243	Pyridoxamine 5'-phosphate oxidase
ATH_RS07325	PF03707	Bacterial signalling protein N terminal repeat
ATH_RS07325	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS07325	PF00563	EAL domain
ATH_RS07330	PF03880	DbpA RNA binding domain   
ATH_RS07330	PF00270	DEAD/DEAH box helicase
ATH_RS07330	PF00271	Helicase conserved C-terminal domain
ATH_RS07340	PF00183	Hsp90 protein
ATH_RS07370	PF04073	Aminoacyl-tRNA editing domain
ATH_RS07375	PF08713	DNA alkylation repair enzyme
ATH_RS07380	PF05958	tRNA (Uracil-5-)-methyltransferase
ATH_RS07385	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS07385	PF00593	TonB dependent receptor
ATH_RS07400	PF00491	Arginase family
ATH_RS07405	PF00682	HMGL-like
ATH_RS07405	PF08502	LeuA allosteric (dimerisation) domain
ATH_RS07415	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
ATH_RS07415	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
ATH_RS07420	PF00924	Mechanosensitive ion channel
ATH_RS07425	PF01368	DHH family
ATH_RS07425	PF02833	DHHA2 domain
ATH_RS07430	PF02810	SEC-C motif
ATH_RS07435	PF02203	Tar ligand binding domain homologue
ATH_RS07435	PF00672	HAMP domain
ATH_RS07435	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS07450	PF00206	Lyase
ATH_RS07450	PF10415	Fumarase C C-terminus
ATH_RS07455	PF01048	Phosphorylase superfamily
ATH_RS07460	PF00698	Acyl transferase domain
ATH_RS07465	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
ATH_RS07475	PF00691	OmpA family
ATH_RS07480	PF04052	TolB amino-terminal domain
ATH_RS07490	PF02472	Biopolymer transport protein ExbD/TolR
ATH_RS07495	PF01618	MotA/TolQ/ExbB proton channel family
ATH_RS07500	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATH_RS07505	PF02874	ATP synthase alpha/beta family, beta-barrel domain
ATH_RS07505	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATH_RS07510	PF00231	ATP synthase
ATH_RS07515	PF02874	ATP synthase alpha/beta family, beta-barrel domain
ATH_RS07515	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATH_RS07515	PF00306	ATP synthase alpha/beta chain, C terminal domain
ATH_RS07520	PF00213	ATP synthase delta (OSCP) subunit
ATH_RS07525	PF00430	ATP synthase B/B' CF(0)
ATH_RS07535	PF17762	HTH domain found in ParB protein
ATH_RS07535	PF02195	ParB-like nuclease domain
ATH_RS07540	PF13614	AAA domain
ATH_RS07545	PF08279	HTH domain
ATH_RS07545	PF02237	Biotin protein ligase C terminal domain
ATH_RS07545	PF03099	Biotin/lipoate A/B protein ligase family
ATH_RS07555	PF02911	Formyl transferase, C-terminal domain
ATH_RS07555	PF00551	Formyl transferase
ATH_RS07560	PF00696	Amino acid kinase family
ATH_RS07565	PF01926	50S ribosome-binding GTPase
ATH_RS07565	PF01018	GTP1/OBG
ATH_RS07570	PF01016	Ribosomal L27 protein
ATH_RS07575	PF00829	Ribosomal prokaryotic L21 protein
ATH_RS07580	PF13662	Toprim domain
ATH_RS07580	PF01807	CHC2 zinc finger
ATH_RS07580	PF16730	DnaG-primase C-terminal, helicase-binding domain
ATH_RS07580	PF08275	DNA primase catalytic core, N-terminal domain
ATH_RS07590	PF14622	Ribonuclease-III-like
ATH_RS07590	PF00035	Double-stranded RNA binding motif
ATH_RS07595	PF01264	Chorismate synthase
ATH_RS07600	PF03976	Polyphosphate kinase 2 (PPK2)
ATH_RS07615	PF01625	Peptide methionine sulfoxide reductase
ATH_RS07620	PF13181	Tetratricopeptide repeat
ATH_RS07620	PF08238	Sel1 repeat
ATH_RS07630	PF01641	SelR domain
ATH_RS07635	PF01557	Fumarylacetoacetate (FAA) hydrolase family
ATH_RS07645	PF00202	Aminotransferase class-III
ATH_RS07650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS07650	PF08447	PAS fold
ATH_RS07650	PF08448	PAS fold
ATH_RS07655	PF01808	AICARFT/IMPCHase bienzyme
ATH_RS07655	PF02142	MGS-like domain
ATH_RS07660	PF02769	AIR synthase related protein, C-terminal domain
ATH_RS07660	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
ATH_RS07660	PF00586	AIR synthase related protein, N-terminal domain
ATH_RS07670	PF10145	Phage-related minor tail protein
ATH_RS07670	PF01464	Transglycosylase SLT domain
ATH_RS07670	PF01551	Peptidase family M23
ATH_RS07690	PF04997	RNA polymerase Rpb1, domain 1
ATH_RS07690	PF04998	RNA polymerase Rpb1, domain 5
ATH_RS07690	PF05000	RNA polymerase Rpb1, domain 4
ATH_RS07690	PF04983	RNA polymerase Rpb1, domain 3
ATH_RS07690	PF00623	RNA polymerase Rpb1, domain 2
ATH_RS07695	PF00562	RNA polymerase Rpb2, domain 6
ATH_RS07695	PF10385	RNA polymerase beta subunit external 1 domain
ATH_RS07695	PF04560	RNA polymerase Rpb2, domain 7
ATH_RS07695	PF04563	RNA polymerase beta subunit
ATH_RS07695	PF04565	RNA polymerase Rpb2, domain 3
ATH_RS07695	PF04561	RNA polymerase Rpb2, domain 2
ATH_RS07700	PF00542	Ribosomal protein L7/L12 C-terminal domain
ATH_RS07700	PF16320	Ribosomal protein L7/L12 dimerisation domain
ATH_RS07705	PF00466	Ribosomal protein L10
ATH_RS07710	PF00687	Ribosomal protein L1p/L10e family
ATH_RS07715	PF03946	Ribosomal protein L11, N-terminal domain
ATH_RS07715	PF00298	Ribosomal protein L11, RNA binding domain
ATH_RS07720	PF02357	Transcription termination factor nusG
ATH_RS07735	PF00471	Ribosomal protein L33
ATH_RS07740	PF00009	Elongation factor Tu GTP binding domain
ATH_RS07740	PF03144	Elongation factor Tu domain 2
ATH_RS07740	PF03143	Elongation factor Tu C-terminal domain
ATH_RS07765	PF08245	Mur ligase middle domain
ATH_RS07770	PF00953	Glycosyl transferase family 4
ATH_RS07770	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
ATH_RS07775	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
ATH_RS07775	PF01676	Metalloenzyme superfamily
ATH_RS07780	PF00005	ABC transporter
ATH_RS07780	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
ATH_RS07785	PF00905	Penicillin binding protein transpeptidase domain
ATH_RS07785	PF00912	Transglycosylase
ATH_RS07845	PF00174	Oxidoreductase molybdopterin binding domain
ATH_RS07850	PF02254	TrkA-N domain
ATH_RS07850	PF00999	Sodium/hydrogen exchanger family
ATH_RS07850	PF02080	TrkA-C domain
ATH_RS07855	PF13361	UvrD-like helicase C-terminal domain
ATH_RS07855	PF00580	UvrD/REP helicase N-terminal domain
ATH_RS07865	PF08534	Redoxin
ATH_RS07870	PF17783	CvfB-like winged helix domain
ATH_RS07870	PF13509	S1 domain
ATH_RS07875	PF00950	ABC 3 transport family
ATH_RS07880	PF00005	ABC transporter
ATH_RS07885	PF02203	Tar ligand binding domain homologue
ATH_RS07885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS07885	PF00672	HAMP domain
ATH_RS07890	PF01875	Memo-like protein
ATH_RS07895	PF01871	AMMECR1
ATH_RS07895	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
ATH_RS07900	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
ATH_RS07900	PF14824	Sirohaem biosynthesis protein central
ATH_RS07900	PF10414	Sirohaem synthase dimerisation region
ATH_RS07910	PF02384	N-6 DNA Methylase
ATH_RS07910	PF12161	HsdM N-terminal domain
ATH_RS07915	PF13784	Fic/DOC family N-terminal
ATH_RS07915	PF02661	Fic/DOC family
ATH_RS07930	PF04851	Type III restriction enzyme, res subunit
ATH_RS07930	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
ATH_RS07930	PF08463	EcoEI R protein C-terminal
ATH_RS07930	PF00271	Helicase conserved C-terminal domain
ATH_RS07935	PF00118	TCP-1/cpn60 chaperonin family
ATH_RS07940	PF00166	Chaperonin 10 Kd subunit
ATH_RS07945	PF00348	Polyprenyl synthetase
ATH_RS07950	PF02575	YbaB/EbfC DNA-binding family
ATH_RS07955	PF02261	Aspartate decarboxylase
ATH_RS07960	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
ATH_RS07965	PF01584	CheW-like domain
ATH_RS07970	PF13742	OB-fold nucleic acid binding domain
ATH_RS07970	PF02601	Exonuclease VII, large subunit
ATH_RS07975	PF01209	ubiE/COQ5 methyltransferase family
ATH_RS07990	PF13277	YmdB-like protein
ATH_RS07995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS07995	PF18719	ArlS sensor domain
ATH_RS07995	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS08005	PF00072	Response regulator receiver domain
ATH_RS08005	PF02954	Bacterial regulatory protein, Fis family
ATH_RS08005	PF00158	Sigma-54 interaction domain
ATH_RS08010	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS08010	PF02203	Tar ligand binding domain homologue
ATH_RS08010	PF00672	HAMP domain
ATH_RS08025	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS08025	PF00072	Response regulator receiver domain
ATH_RS08045	PF00271	Helicase conserved C-terminal domain
ATH_RS08045	PF02559	CarD-like/TRCF domain
ATH_RS08045	PF17757	UvrB interaction domain
ATH_RS08045	PF03461	TRCF domain
ATH_RS08045	PF00270	DEAD/DEAH box helicase
ATH_RS08090	PF09334	tRNA synthetases class I (M)
ATH_RS08090	PF13603	Leucyl-tRNA synthetase, Domain 2
ATH_RS08090	PF00133	tRNA synthetases class I (I, L, M and V)
ATH_RS08100	PF01618	MotA/TolQ/ExbB proton channel family
ATH_RS08105	PF00691	OmpA family
ATH_RS08105	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
ATH_RS08115	PF02355	Protein export membrane protein
ATH_RS08115	PF07549	SecD/SecF GG Motif
ATH_RS08120	PF02355	Protein export membrane protein
ATH_RS08125	PF02699	Preprotein translocase subunit
ATH_RS08135	PF00593	TonB dependent receptor
ATH_RS08135	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS08140	PF01966	HD domain
ATH_RS08140	PF01743	Poly A polymerase head domain
ATH_RS08140	PF12627	Probable RNA and SrmB- binding site of polymerase A
ATH_RS08145	PF05552	Conserved TM helix
ATH_RS08145	PF00924	Mechanosensitive ion channel
ATH_RS08150	PF04073	Aminoacyl-tRNA editing domain
ATH_RS08150	PF03129	Anticodon binding domain
ATH_RS08150	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATH_RS08155	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
ATH_RS08155	PF01488	Shikimate / quinate 5-dehydrogenase
ATH_RS08155	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
ATH_RS08160	PF00348	Polyprenyl synthetase
ATH_RS08170	PF00815	Histidinol dehydrogenase
ATH_RS08175	PF01202	Shikimate kinase
ATH_RS08185	PF01618	MotA/TolQ/ExbB proton channel family
ATH_RS08190	PF02472	Biopolymer transport protein ExbD/TolR
ATH_RS08200	PF01594	AI-2E family transporter
ATH_RS08205	PF00171	Aldehyde dehydrogenase family
ATH_RS08210	PF01116	Fructose-bisphosphate aldolase class-II
ATH_RS08215	PF00639	PPIC-type PPIASE domain
ATH_RS08220	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS08220	PF00072	Response regulator receiver domain
ATH_RS08225	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS08225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS08225	PF00672	HAMP domain
ATH_RS08240	PF02082	Transcriptional regulator
ATH_RS08245	PF00312	Ribosomal protein S15
ATH_RS08250	PF06463	Molybdenum Cofactor Synthesis C
ATH_RS08250	PF04055	Radical SAM superfamily
ATH_RS08255	PF02885	Glycosyl transferase family, helical bundle domain
ATH_RS08255	PF00591	Glycosyl transferase family, a/b domain
ATH_RS08270	PF10518	TAT (twin-arginine translocation) pathway signal sequence
ATH_RS08270	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
ATH_RS08270	PF00384	Molybdopterin oxidoreductase
ATH_RS08270	PF01568	Molydopterin dinucleotide binding domain
ATH_RS08275	PF12838	4Fe-4S dicluster domain
ATH_RS08275	PF12800	4Fe-4S binding domain
ATH_RS08280	PF00037	4Fe-4S binding domain
ATH_RS08280	PF12801	4Fe-4S binding domain
ATH_RS08285	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
ATH_RS08305	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ATH_RS08305	PF02403	Seryl-tRNA synthetase N-terminal domain
ATH_RS08315	PF02659	Putative manganese efflux pump
ATH_RS08325	PF00593	TonB dependent receptor
ATH_RS08325	PF07715	TonB-dependent Receptor Plug Domain
ATH_RS08330	PF13649	Methyltransferase domain
ATH_RS08340	PF03994	Domain of Unknown Function (DUF350) 
ATH_RS08345	PF00579	tRNA synthetases class I (W and Y)
ATH_RS08350	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS08350	PF00072	Response regulator receiver domain
ATH_RS08355	PF00512	His Kinase A (phospho-acceptor) domain
ATH_RS08355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ATH_RS08355	PF00672	HAMP domain
ATH_RS08360	PF00202	Aminotransferase class-III
ATH_RS08370	PF03831	PhnA domain
ATH_RS08370	PF08274	PhnA Zinc-Ribbon 
ATH_RS08380	PF00425	chorismate binding enzyme
ATH_RS08385	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
ATH_RS08385	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
ATH_RS08395	PF00857	Isochorismatase family
ATH_RS08405	PF12102	Domain of unknown function (DUF3578)
ATH_RS08405	PF07728	AAA domain (dynein-related subfamily)
ATH_RS08405	PF12102	Domain of unknown function (DUF3578)
ATH_RS08405	PF07728	AAA domain (dynein-related subfamily)
ATH_RS08415	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
ATH_RS08415	PF03900	Porphobilinogen deaminase, C-terminal domain
ATH_RS08425	PF12170	DNA polymerase III tau subunit V interacting with alpha
ATH_RS08425	PF12169	DNA polymerase III subunits gamma and tau domain III
ATH_RS08430	PF01177	Asp/Glu/Hydantoin racemase
ATH_RS08435	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ATH_RS08435	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ATH_RS08440	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
ATH_RS08440	PF07498	Rho termination factor, N-terminal domain
ATH_RS08440	PF07497	Rho termination factor, RNA-binding domain
ATH_RS08445	PF00578	AhpC/TSA family
ATH_RS08445	PF10417	C-terminal domain of 1-Cys peroxiredoxin
ATH_RS08455	PF00334	Nucleoside diphosphate kinase
ATH_RS08465	PF01783	Ribosomal L32p protein family
ATH_RS08470	PF02504	Fatty acid synthesis protein
ATH_RS08475	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ATH_RS08475	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
ATH_RS08485	PF00350	Dynamin family
ATH_RS08490	PF00350	Dynamin family
ATH_RS08495	PF13183	4Fe-4S dicluster domain
ATH_RS08495	PF13085	2Fe-2S iron-sulfur cluster binding domain
ATH_RS08500	PF00890	FAD binding domain
ATH_RS08500	PF02910	Fumarate reductase flavoprotein C-term
ATH_RS08505	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
ATH_RS08510	PF00361	Proton-conducting membrane transporter
ATH_RS08515	PF00361	Proton-conducting membrane transporter
ATH_RS08520	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
ATH_RS08520	PF00361	Proton-conducting membrane transporter
ATH_RS08525	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
ATH_RS08530	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
ATH_RS08535	PF12838	4Fe-4S dicluster domain
ATH_RS08540	PF00146	NADH dehydrogenase
ATH_RS08545	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
ATH_RS08545	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ATH_RS08545	PF00384	Molybdopterin oxidoreductase
ATH_RS08550	PF00285	Citrate synthase, C-terminal domain
ATH_RS08555	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
ATH_RS08555	PF10531	SLBB domain
ATH_RS08555	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ATH_RS08565	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
ATH_RS08565	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
ATH_RS08570	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
ATH_RS08575	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
ATH_RS08580	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
ATH_RS08585	PF06738	Putative threonine/serine exporter
ATH_RS08585	PF12821	Threonine/Serine exporter, ThrE
ATH_RS08590	PF06738	Putative threonine/serine exporter
ATH_RS08600	PF03309	Type III pantothenate kinase
ATH_RS08605	PF01634	ATP phosphoribosyltransferase
ATH_RS08615	PF00672	HAMP domain
ATH_RS08615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS08615	PF02203	Tar ligand binding domain homologue
ATH_RS08620	PF08448	PAS fold
ATH_RS08620	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS08640	PF03734	L,D-transpeptidase catalytic domain
ATH_RS08640	PF01476	LysM domain
ATH_RS08645	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ATH_RS08645	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ATH_RS08660	PF00285	Citrate synthase, C-terminal domain
ATH_RS08665	PF00330	Aconitase family (aconitate hydratase)
ATH_RS08665	PF00694	Aconitase C-terminal domain
ATH_RS08670	PF04303	PrpF protein
ATH_RS08675	PF01464	Transglycosylase SLT domain
ATH_RS08675	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
ATH_RS08680	PF02887	Pyruvate kinase, alpha/beta domain
ATH_RS08680	PF00224	Pyruvate kinase, barrel domain
ATH_RS08680	PF00391	PEP-utilising enzyme, mobile domain
ATH_RS08690	PF02021	Uncharacterised protein family UPF0102
ATH_RS08695	PF00155	Aminotransferase class I and II
ATH_RS08700	PF00484	Carbonic anhydrase
ATH_RS08710	PF04055	Radical SAM superfamily
ATH_RS08720	PF04028	Domain of unknown function (DUF374)
ATH_RS08725	PF04055	Radical SAM superfamily
ATH_RS08725	PF01938	TRAM domain
ATH_RS08725	PF00919	Uncharacterized protein family UPF0004
ATH_RS08735	PF13184	NusA-like KH domain
ATH_RS08735	PF08529	NusA N-terminal domain
ATH_RS08740	PF09190	DALR domain
ATH_RS08740	PF01406	tRNA synthetases class I (C) catalytic domain
ATH_RS08750	PF01084	Ribosomal protein S18
ATH_RS08755	PF00436	Single-strand binding protein family
ATH_RS08760	PF01250	Ribosomal protein S6
ATH_RS08770	PF00773	RNB domain
ATH_RS08770	PF08206	Ribonuclease B OB domain
ATH_RS08770	PF08461	Ribonuclease R winged-helix domain
ATH_RS08770	PF17876	Cold shock domain
ATH_RS08770	PF00575	S1 RNA binding domain
ATH_RS08775	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
ATH_RS08775	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
ATH_RS08790	PF16925	Tetracyclin repressor-like, C-terminal domain
ATH_RS08790	PF00440	Bacterial regulatory proteins, tetR family
ATH_RS08800	PF00156	Phosphoribosyl transferase domain
ATH_RS08800	PF13537	Glutamine amidotransferase domain
ATH_RS08805	PF01113	Dihydrodipicolinate reductase, N-terminus
ATH_RS08805	PF05173	Dihydrodipicolinate reductase, C-terminus
ATH_RS08810	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ATH_RS08815	PF00085	Thioredoxin
ATH_RS08820	PF02272	DHHA1 domain
ATH_RS08820	PF01411	tRNA synthetases class II (A)
ATH_RS08820	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
ATH_RS08840	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS08840	PF00072	Response regulator receiver domain
ATH_RS08845	PF13180	PDZ domain
ATH_RS08845	PF17820	PDZ domain
ATH_RS08850	PF00920	Dehydratase family
ATH_RS08885	PF01258	Prokaryotic dksA/traR C4-type zinc finger
ATH_RS08890	PF01142	tRNA pseudouridine synthase D (TruD)
ATH_RS08895	PF15437	Plasminogen-binding protein pgbA C-terminal
ATH_RS08905	PF03572	Peptidase family S41
ATH_RS08905	PF13180	PDZ domain
ATH_RS08910	PF01259	SAICAR synthetase
ATH_RS08915	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
ATH_RS08930	PF01553	Acyltransferase
ATH_RS08935	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
ATH_RS08940	PF02416	mttA/Hcf106 family
ATH_RS08945	PF02416	mttA/Hcf106 family
ATH_RS08950	PF05746	DALR anticodon binding domain
ATH_RS08950	PF00750	tRNA synthetases class I (R)
ATH_RS08950	PF03485	Arginyl tRNA synthetase N terminal domain
ATH_RS08960	PF01467	Cytidylyltransferase-like
ATH_RS08965	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ATH_RS08965	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
ATH_RS08970	PF00162	Phosphoglycerate kinase
ATH_RS08975	PF00121	Triosephosphate isomerase
ATH_RS08985	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
ATH_RS08985	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
ATH_RS08990	PF01817	Chorismate mutase type II
ATH_RS08990	PF01842	ACT domain
ATH_RS08990	PF00800	Prephenate dehydratase
ATH_RS08995	PF00155	Aminotransferase class I and II
ATH_RS09000	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
ATH_RS09000	PF02779	Transketolase, pyrimidine binding domain
ATH_RS09000	PF02780	Transketolase, C-terminal domain
ATH_RS09005	PF03150	Di-haem cytochrome c peroxidase
ATH_RS09005	PF00034	Cytochrome c
ATH_RS09010	PF02545	Maf-like protein
ATH_RS09020	PF01914	MarC family integral membrane protein
ATH_RS09030	PF00939	Sodium:sulfate symporter transmembrane region
ATH_RS09040	PF00085	Thioredoxin
ATH_RS09040	PF11412	Disulphide bond corrector protein DsbC
ATH_RS09040	PF02683	Cytochrome C biogenesis protein transmembrane region
ATH_RS09045	PF00085	Thioredoxin
ATH_RS09050	PF18030	RimK PreATP-grasp domain
ATH_RS09050	PF08443	RimK-like ATP-grasp domain
ATH_RS09065	PF00563	EAL domain
ATH_RS09065	PF10442	FIST C domain
ATH_RS09065	PF08495	FIST N domain
ATH_RS09065	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS09070	PF02666	Phosphatidylserine decarboxylase
ATH_RS09085	PF06725	3D domain
ATH_RS09085	PF03562	MltA specific insert domain
ATH_RS09090	PF00012	Hsp70 protein
ATH_RS09095	PF01025	GrpE
ATH_RS09105	PF00005	ABC transporter
ATH_RS09120	PF13190	PDGLE domain
ATH_RS09120	PF01891	Cobalt uptake substrate-specific transmembrane region
ATH_RS09130	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
ATH_RS09135	PF00586	AIR synthase related protein, N-terminal domain
ATH_RS09135	PF02769	AIR synthase related protein, C-terminal domain
ATH_RS09145	PF07728	AAA domain (dynein-related subfamily)
ATH_RS09145	PF12102	Domain of unknown function (DUF3578)
ATH_RS09155	PF01924	Hydrogenase formation hypA family
ATH_RS09160	PF01455	HupF/HypC family
ATH_RS09165	PF02492	CobW/HypB/UreG, nucleotide-binding domain
ATH_RS09175	PF07503	HypF finger
ATH_RS09175	PF17788	HypF Kae1-like domain
ATH_RS09175	PF00708	Acylphosphatase
ATH_RS09175	PF01300	Telomere recombination
ATH_RS09185	PF01750	Hydrogenase maturation protease
ATH_RS09190	PF01292	Prokaryotic cytochrome b561
ATH_RS09195	PF00374	Nickel-dependent hydrogenase
ATH_RS09200	PF10518	TAT (twin-arginine translocation) pathway signal sequence
ATH_RS09200	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
ATH_RS09200	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
ATH_RS09205	PF01416	tRNA pseudouridine synthase
ATH_RS09220	PF01255	Putative undecaprenyl diphosphate synthase
ATH_RS09225	PF04127	DNA / pantothenate metabolism flavoprotein
ATH_RS09225	PF02441	Flavoprotein
ATH_RS09230	PF12804	MobA-like NTP transferase domain
ATH_RS09230	PF14602	Hexapeptide repeat of succinyl-transferase
ATH_RS09240	PF00271	Helicase conserved C-terminal domain
ATH_RS09240	PF17191	RecG wedge domain
ATH_RS09240	PF00270	DEAD/DEAH box helicase
ATH_RS09245	PF05958	tRNA (Uracil-5-)-methyltransferase
ATH_RS09250	PF00669	Bacterial flagellin N-terminal helical region
ATH_RS09250	PF07196	Flagellin hook IN motif
ATH_RS09250	PF00700	Bacterial flagellin C-terminal helical region
ATH_RS09255	PF00700	Bacterial flagellin C-terminal helical region
ATH_RS09255	PF00669	Bacterial flagellin N-terminal helical region
ATH_RS09265	PF13302	Acetyltransferase (GNAT) domain
ATH_RS09270	PF02585	GlcNAc-PI de-N-acetylase
ATH_RS09280	PF08666	SAF domain
ATH_RS09280	PF03102	NeuB family
ATH_RS09285	PF13302	Acetyltransferase (GNAT) domain
ATH_RS09295	PF02348	Cytidylyltransferase
ATH_RS09300	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
ATH_RS09305	PF02719	Polysaccharide biosynthesis protein
ATH_RS09315	PF00154	recA bacterial DNA recombination protein
ATH_RS09320	PF00209	Sodium:neurotransmitter symporter family
ATH_RS09325	PF01261	Xylose isomerase-like TIM barrel
ATH_RS09335	PF01740	STAS domain
ATH_RS09335	PF00916	Sulfate permease family
ATH_RS09345	PF00004	ATPase family associated with various cellular activities (AAA)
ATH_RS09345	PF16450	Proteasomal ATPase OB C-terminal domain
ATH_RS09345	PF17758	Proteasomal ATPase OB N-terminal domain
ATH_RS09355	PF02621	Menaquinone biosynthesis
ATH_RS09360	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
ATH_RS09365	PF16226	Domain of unknown function (DUF4885)
ATH_RS09370	PF01131	DNA topoisomerase
ATH_RS09370	PF01751	Toprim domain
ATH_RS09370	PF13368	Topoisomerase C-terminal repeat
ATH_RS09380	PF06968	Biotin and Thiamin Synthesis associated domain
ATH_RS09380	PF04055	Radical SAM superfamily
ATH_RS09385	PF00113	Enolase, C-terminal TIM barrel domain
ATH_RS09385	PF03952	Enolase, N-terminal domain
ATH_RS09400	PF18766	SWI2/SNF2 ATPase
ATH_RS09400	PF12008	Type I restriction and modification enzyme - subunit R C terminal
ATH_RS09400	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
ATH_RS09435	PF02384	N-6 DNA Methylase
ATH_RS09435	PF12161	HsdM N-terminal domain
ATH_RS09440	PF01134	Glucose inhibited division protein A
ATH_RS09440	PF13932	GidA associated domain
ATH_RS09445	PF00677	Lumazine binding domain
ATH_RS09450	PF03448	MgtE intracellular N domain
ATH_RS09450	PF00571	CBS domain
ATH_RS09450	PF01769	Divalent cation transporter
ATH_RS09465	PF06689	ClpX C4-type zinc finger
ATH_RS09465	PF10431	C-terminal, D2-small domain, of ClpB protein 
ATH_RS09465	PF07724	AAA domain (Cdc48 subfamily)
ATH_RS09470	PF00132	Bacterial transferase hexapeptide (six repeats)
ATH_RS09470	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
ATH_RS09475	PF07977	FabA-like domain
ATH_RS09480	PF02684	Lipid-A-disaccharide synthetase
ATH_RS09485	PF02677	Epoxyqueuosine reductase QueH
ATH_RS09520	PF01027	Inhibitor of apoptosis-promoting Bax1
ATH_RS09530	PF03840	Preprotein translocase SecG subunit
ATH_RS09535	PF01765	Ribosome recycling factor
ATH_RS09540	PF00156	Phosphoribosyl transferase domain
ATH_RS09555	PF01212	Beta-eliminating lyase
ATH_RS09560	PF01544	CorA-like Mg2+ transporter protein
ATH_RS09565	PF03883	Peroxide stress protein YaaA
ATH_RS09570	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ATH_RS09570	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
ATH_RS09590	PF03167	Uracil DNA glycosylase superfamily
ATH_RS09595	PF00171	Aldehyde dehydrogenase family
ATH_RS09600	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
ATH_RS09600	PF00205	Thiamine pyrophosphate enzyme, central domain
ATH_RS09600	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ATH_RS09605	PF13419	Haloacid dehalogenase-like hydrolase
ATH_RS09610	PF00384	Molybdopterin oxidoreductase
ATH_RS09610	PF18364	Molybdopterin oxidoreductase N-terminal domain
ATH_RS09610	PF01568	Molydopterin dinucleotide binding domain
ATH_RS09620	PF00210	Ferritin-like domain
ATH_RS09625	PF07690	Major Facilitator Superfamily
ATH_RS09635	PF08448	PAS fold
ATH_RS09635	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS09640	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
ATH_RS09640	PF00529	HlyD membrane-fusion protein of T1SS
ATH_RS09645	PF00873	AcrB/AcrD/AcrF family
ATH_RS09650	PF02321	Outer membrane efflux protein
ATH_RS09655	PF02203	Tar ligand binding domain homologue
ATH_RS09655	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
ATH_RS09655	PF00672	HAMP domain
ATH_RS09665	PF01053	Cys/Met metabolism PLP-dependent enzyme
ATH_RS09670	PF02082	Transcriptional regulator
ATH_RS09675	PF00291	Pyridoxal-phosphate dependent enzyme
ATH_RS09685	PF01507	Phosphoadenosine phosphosulfate reductase family
ATH_RS09690	PF01507	Phosphoadenosine phosphosulfate reductase family
ATH_RS09695	PF00009	Elongation factor Tu GTP binding domain
ATH_RS09705	PF00291	Pyridoxal-phosphate dependent enzyme
ATH_RS09715	PF00266	Aminotransferase class-V
ATH_RS09725	PF00149	Calcineurin-like phosphoesterase
ATH_RS09730	PF02630	SCO1/SenC
ATH_RS09750	PF10442	FIST C domain
ATH_RS09750	PF08495	FIST N domain
ATH_RS09750	PF00990	Diguanylate cyclase, GGDEF domain
ATH_RS09750	PF00563	EAL domain
ATH_RS09755	PF00899	ThiF family
ATH_RS09755	PF00581	Rhodanese-like domain
ATH_RS09760	PF00679	Elongation factor G C-terminus
ATH_RS09760	PF03144	Elongation factor Tu domain 2
ATH_RS09760	PF00009	Elongation factor Tu GTP binding domain
ATH_RS09765	PF04143	Sulphur transport
ATH_RS09770	PF01206	Sulfurtransferase TusA
ATH_RS09780	PF00072	Response regulator receiver domain
ATH_RS09780	PF00486	Transcriptional regulatory protein, C terminal
ATH_RS09790	PF02511	Thymidylate synthase complementing protein
ATH_RS09795	PF03458	UPF0126 domain
ATH_RS09805	PF16226	Domain of unknown function (DUF4885)
ATH_RS09820	PF00551	Formyl transferase
ATH_RS09820	PF02911	Formyl transferase, C-terminal domain
ATH_RS09825	PF02075	Crossover junction endodeoxyribonuclease RuvC
