locus-tag	class	description
AUT07_RS00010	COG2885	chlorophyll binding
AUT07_RS00015	COG0823	Involved in the tonB-independent uptake of proteins
AUT07_RS00020	COG4890	Cyd operon protein YbgT
AUT07_RS00025	COG1294	oxidase, subunit
AUT07_RS00030	COG1271	oxidase subunit
AUT07_RS00035	COG0542	response to heat
AUT07_RS00040	COG0564	pseudouridine synthase activity
AUT07_RS00045	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AUT07_RS00050	COG0037	tRNA processing
AUT07_RS00055	COG0825	malonyl-CoA metabolic process
AUT07_RS00065	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AUT07_RS00070	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AUT07_RS00075	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AUT07_RS00080	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AUT07_RS00090	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AUT07_RS00095	COG0750	zinc metalloprotease
AUT07_RS00100	COG0575	Belongs to the CDS family
AUT07_RS00105	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AUT07_RS00110	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AUT07_RS00115	COG0233	cytoplasmic translational termination
AUT07_RS00120	COG0528	UMP kinase activity
AUT07_RS00125	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AUT07_RS00140	COG0588	phosphoglycerate mutase activity
AUT07_RS00155	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AUT07_RS00165	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AUT07_RS00170	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUT07_RS00175	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AUT07_RS00185	COG0259	pyridoxamine-phosphate oxidase activity
AUT07_RS00195	COG0629	single-stranded DNA binding
AUT07_RS00200	COG2252	PERMEase
AUT07_RS00210	COG4591	ABC-type transport system involved in lipoprotein release permease component
AUT07_RS00215	COG1136	(ABC) transporter
AUT07_RS00220	COG4591	ABC-type transport system involved in lipoprotein release permease component
AUT07_RS00230	COG2878	Part of a membrane complex involved in electron transport
AUT07_RS00255	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AUT07_RS00260	COG0284	orotidine-5'-phosphate decarboxylase activity
AUT07_RS00265	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AUT07_RS00270	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AUT07_RS00275	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUT07_RS00280	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AUT07_RS00285	COG1028	Short-chain dehydrogenase reductase Sdr
AUT07_RS00295	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUT07_RS00305	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AUT07_RS00310	COG0708	Exodeoxyribonuclease III
AUT07_RS00315	COG0616	signal peptide processing
AUT07_RS00325	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AUT07_RS00330	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AUT07_RS00335	COG2925	Exonuclease
AUT07_RS00340	COG1530	ribonuclease E activity
AUT07_RS00345	COG0564	pseudouridine synthase activity
AUT07_RS00350	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AUT07_RS00355	COG0416	fatty acid biosynthetic process
AUT07_RS00360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUT07_RS00365	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AUT07_RS00370	COG1028	Short-chain dehydrogenase reductase Sdr
AUT07_RS00375	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUT07_RS00380	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUT07_RS00385	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AUT07_RS00390	COG0470	DNA polymerase III
AUT07_RS00395	COG0084	hydrolase, TatD family'
AUT07_RS00400	COG0537	adenosine 5'-monophosphoramidase activity
AUT07_RS00405	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AUT07_RS00410	COG0316	Belongs to the HesB IscA family
AUT07_RS00420	COG0396	ATPase activity
AUT07_RS00425	COG0719	Fe-S assembly protein
AUT07_RS00430	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AUT07_RS00435	COG2166	iron-sulfur cluster assembly
AUT07_RS00445	COG4238	major outer membrane lipoprotein
AUT07_RS00450	COG0469	pyruvate kinase activity
AUT07_RS00460	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AUT07_RS00465	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AUT07_RS00470	COG1252	NADH dehydrogenase
AUT07_RS00475	COG1115	amino acid carrier protein
AUT07_RS00480	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AUT07_RS00500	COG0668	transmembrane transport
AUT07_RS00505	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AUT07_RS00510	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AUT07_RS00515	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AUT07_RS00520	COG0354	folic acid binding
AUT07_RS00525	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AUT07_RS00535	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AUT07_RS00540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AUT07_RS00550	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AUT07_RS00560	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AUT07_RS00565	COG2976	Protein conserved in bacteria
AUT07_RS00570	COG0124	histidyl-tRNA synthetase
AUT07_RS00575	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AUT07_RS00585	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AUT07_RS00590	COG1104	cysteine desulfurase activity
AUT07_RS00600	COG1561	YicC-like family, N-terminal region
AUT07_RS00605	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AUT07_RS00615	COG0756	dUTP diphosphatase activity
AUT07_RS00620	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AUT07_RS00630	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AUT07_RS00635	COG0438	transferase activity, transferring glycosyl groups
AUT07_RS00655	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AUT07_RS00660	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AUT07_RS00665	COG1519	Transferase
AUT07_RS00670	COG0859	PFAM glycosyl transferase family 9
AUT07_RS00675	COG0859	PFAM glycosyl transferase family 9
AUT07_RS00680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AUT07_RS00685	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AUT07_RS00690	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AUT07_RS00695	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AUT07_RS00745	COG1086	Polysaccharide biosynthesis protein
AUT07_RS00760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUT07_RS00765	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUT07_RS00770	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AUT07_RS00775	COG0237	dephospho-CoA kinase activity
AUT07_RS00780	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AUT07_RS00785	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AUT07_RS00790	COG0741	lytic transglycosylase activity
AUT07_RS00800	COG0762	integral membrane protein
AUT07_RS00805	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AUT07_RS00810	COG0189	ligase activity
AUT07_RS00815	COG3085	chromosome segregation
AUT07_RS00820	COG4942	peptidase
AUT07_RS00820	COG1388	LysM domain
AUT07_RS00825	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AUT07_RS00830	COG0203	ribosomal protein L17
AUT07_RS00840	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AUT07_RS00845	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AUT07_RS00855	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AUT07_RS00860	COG0201	protein transport
AUT07_RS00865	COG0200	Binds to the 23S rRNA
AUT07_RS00870	COG1841	ribosomal large subunit assembly
AUT07_RS00875	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AUT07_RS00885	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AUT07_RS00890	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AUT07_RS00905	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AUT07_RS00910	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AUT07_RS00915	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AUT07_RS00925	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AUT07_RS00945	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AUT07_RS00950	COG0089	rRNA binding
AUT07_RS00955	COG0088	Forms part of the polypeptide exit tunnel
AUT07_RS00960	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AUT07_RS00965	COG0051	transcription antitermination factor activity, RNA binding
AUT07_RS00970	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AUT07_RS00980	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AUT07_RS00985	COG0751	glycine-tRNA ligase activity
AUT07_RS00990	COG0752	glycyl-tRNA synthetase alpha subunit
AUT07_RS00995	COG0194	GDP metabolic process
AUT07_RS01005	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AUT07_RS01010	COG0739	heme binding
AUT07_RS01015	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AUT07_RS01020	COG1121	(ABC) transporter
AUT07_RS01025	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUT07_RS01040	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AUT07_RS01045	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AUT07_RS01055	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AUT07_RS01060	COG0328	RNA-DNA hybrid ribonuclease activity
AUT07_RS01065	COG2226	methyltransferase
AUT07_RS01070	COG0148	phosphopyruvate hydratase activity
AUT07_RS01075	COG0504	CTP synthase activity
AUT07_RS01080	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AUT07_RS01085	COG0316	Belongs to the HesB IscA family
AUT07_RS01090	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUT07_RS01105	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AUT07_RS01110	COG0842	Transport permease protein
AUT07_RS01115	COG1131	(ABC) transporter
AUT07_RS01125	COG0459	protein refolding
AUT07_RS01130	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AUT07_RS01135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AUT07_RS01140	COG1554	hydrolase, family 65, central catalytic
AUT07_RS01145	COG1263	PTS System
AUT07_RS01145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUT07_RS01150	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AUT07_RS01175	COG1862	Preprotein translocase
AUT07_RS01180	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AUT07_RS01185	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AUT07_RS01190	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AUT07_RS01190	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AUT07_RS01195	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AUT07_RS01200	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AUT07_RS01205	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AUT07_RS01210	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AUT07_RS01215	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AUT07_RS01220	COG0142	geranyltranstransferase activity
AUT07_RS01225	COG1988	membrane-bound metal-dependent
AUT07_RS01230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AUT07_RS01235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUT07_RS01240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUT07_RS01245	COG1121	(ABC) transporter
AUT07_RS01250	COG0803	Belongs to the bacterial solute-binding protein 9 family
AUT07_RS01255	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AUT07_RS01260	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AUT07_RS01265	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AUT07_RS01270	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AUT07_RS01280	COG0072	phenylalanine-tRNA ligase activity
AUT07_RS01280	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUT07_RS01285	COG0776	regulation of translation
AUT07_RS01290	COG1114	Component of the transport system for branched-chain amino acids
AUT07_RS01295	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AUT07_RS01300	COG0505	Belongs to the CarA family
AUT07_RS01305	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AUT07_RS01310	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AUT07_RS01315	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AUT07_RS01320	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AUT07_RS01325	COG0196	riboflavin kinase activity
AUT07_RS01330	COG0268	Binds directly to 16S ribosomal RNA
AUT07_RS01335	COG0484	heat shock protein binding
AUT07_RS01340	COG0443	Heat shock 70 kDa protein
AUT07_RS01350	COG2706	6-phosphogluconolactonase activity
AUT07_RS01360	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AUT07_RS01365	COG0156	8-amino-7-oxononanoate synthase activity
AUT07_RS01375	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AUT07_RS01390	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AUT07_RS01395	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AUT07_RS01400	COG0085	RNA polymerase activity
AUT07_RS01405	COG0222	ribosome binding
AUT07_RS01410	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AUT07_RS01415	COG0081	regulation of translation
AUT07_RS01425	COG0250	Participates in transcription elongation, termination and antitermination
AUT07_RS01435	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AUT07_RS01440	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AUT07_RS01445	COG0049	tRNA binding
AUT07_RS01460	COG2923	Belongs to the DsrF TusC family
AUT07_RS01465	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AUT07_RS01470	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AUT07_RS01475	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AUT07_RS01485	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AUT07_RS01490	COG0180	Tryptophanyl-tRNA synthetase
AUT07_RS01495	COG0471	metal ion transport
AUT07_RS01500	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AUT07_RS01505	COG0717	Belongs to the dCTP deaminase family
AUT07_RS01510	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUT07_RS01510	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUT07_RS01515	COG0302	gtp cyclohydrolase
AUT07_RS01525	COG0544	peptidyl-prolyl cis-trans isomerase activity
AUT07_RS01530	COG0740	serine-type endopeptidase activity
AUT07_RS01535	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AUT07_RS01540	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AUT07_RS01550	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AUT07_RS01560	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AUT07_RS01565	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AUT07_RS01570	COG0567	Dehydrogenase, E1 component
AUT07_RS01575	COG0508	dehydrogenase complex catalyzes the overall conversion of
AUT07_RS01585	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AUT07_RS01595	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AUT07_RS01600	COG0306	phosphate transporter
AUT07_RS01605	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AUT07_RS01610	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AUT07_RS01620	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AUT07_RS01630	COG0527	aspartate kinase activity
AUT07_RS01630	COG0460	homoserine dehydrogenase
AUT07_RS01645	COG0765	amino acid transport
AUT07_RS01650	COG0163	prenyltransferase activity
AUT07_RS01655	COG1286	toxin biosynthetic process
AUT07_RS01660	COG0285	dihydrofolate synthase activity
AUT07_RS01665	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AUT07_RS01675	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AUT07_RS01680	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AUT07_RS01685	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AUT07_RS01700	COG0205	6-phosphofructokinase activity
AUT07_RS01705	COG0316	Belongs to the HesB IscA family
AUT07_RS01705	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AUT07_RS01710	COG0596	Alpha beta hydrolase
AUT07_RS01720	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AUT07_RS01725	COG0706	membrane insertase activity
AUT07_RS01730	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AUT07_RS01735	COG0594	ribonuclease P activity
AUT07_RS01740	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AUT07_RS01750	COG0592	DNA-directed DNA polymerase activity
AUT07_RS01755	COG0187	DNA topoisomerase II activity
AUT07_RS01760	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AUT07_RS01765	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AUT07_RS01770	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AUT07_RS01775	COG0445	tRNA wobble uridine modification
AUT07_RS01780	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AUT07_RS01790	COG1072	(Pantothenic acid kinase))
AUT07_RS01820	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AUT07_RS01825	COG0215	cysteine-tRNA ligase activity
AUT07_RS01830	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AUT07_RS01835	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AUT07_RS01835	COG4651	solute:proton antiporter activity
AUT07_RS01840	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AUT07_RS01850	COG0326	Molecular chaperone. Has ATPase activity
AUT07_RS01855	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AUT07_RS01860	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AUT07_RS01870	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AUT07_RS01875	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AUT07_RS01890	COG2918	glutathione biosynthetic process
AUT07_RS01895	COG4536	flavin adenine dinucleotide binding
AUT07_RS01900	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AUT07_RS01905	COG0228	four-way junction DNA binding
AUT07_RS01915	COG0336	Belongs to the RNA methyltransferase TrmD family
AUT07_RS01925	COG0442	prolyl-tRNA aminoacylation
AUT07_RS01930	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AUT07_RS01935	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AUT07_RS01940	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AUT07_RS01945	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AUT07_RS01950	COG0494	nUDIX hydrolase
AUT07_RS01955	COG4143	(ABC) transporter
AUT07_RS01960	COG1178	ABC-type Fe3 transport system permease component
AUT07_RS01965	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AUT07_RS01970	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AUT07_RS01975	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AUT07_RS01985	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AUT07_RS01990	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AUT07_RS02000	COG0149	triose-phosphate isomerase activity
AUT07_RS02010	COG0833	amino acid
AUT07_RS02015	COG0814	amino acid
AUT07_RS02020	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AUT07_RS02035	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AUT07_RS02045	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUT07_RS02065	COG1074	ATP-dependent DNA helicase activity
AUT07_RS02070	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AUT07_RS02080	COG0742	ribosomal rna small subunit methyltransferase
AUT07_RS02085	COG0552	protein localization to endoplasmic reticulum
AUT07_RS02090	COG2884	Cell division ATP-binding protein ftsE
AUT07_RS02095	COG2177	Part of the ABC transporter FtsEX involved in
AUT07_RS02105	COG0439	Biotin carboxylase
AUT07_RS02110	COG0511	ligase activity, forming carbon-carbon bonds
AUT07_RS02115	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AUT07_RS02120	COG1077	Cell shape determining protein MreB Mrl
AUT07_RS02125	COG1792	Involved in formation and maintenance of cell shape
AUT07_RS02130	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AUT07_RS02135	COG0312	modulator of DNA gyrase
AUT07_RS02140	COG0312	modulator of DNA gyrase
AUT07_RS02145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUT07_RS02150	COG1137	ATPase activity
AUT07_RS02155	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AUT07_RS02160	COG3117	lipopolysaccharide transmembrane transporter activity
AUT07_RS02165	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AUT07_RS02170	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AUT07_RS02170	COG0517	IMP dehydrogenase activity
AUT07_RS02175	COG5007	Belongs to the BolA IbaG family
AUT07_RS02180	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AUT07_RS02185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUT07_RS02195	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AUT07_RS02200	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AUT07_RS02205	COG0625	glutathione transferase activity
AUT07_RS02210	COG2823	Periplasmic or secreted lipoprotein
AUT07_RS02215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AUT07_RS02225	COG0586	Pfam SNARE associated Golgi protein
AUT07_RS02230	COG0861	Integral membrane protein TerC family
AUT07_RS02235	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUT07_RS02245	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AUT07_RS02245	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AUT07_RS02255	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AUT07_RS02270	COG0358	DNA primase activity
AUT07_RS02290	COG0033	Phosphoglucomutase
AUT07_RS02295	COG0596	Alpha beta hydrolase
AUT07_RS02300	COG0716	FMN binding
AUT07_RS02310	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AUT07_RS02330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AUT07_RS02335	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AUT07_RS02340	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AUT07_RS02345	COG4535	Mg2 and Co2 transporter CorC
AUT07_RS02350	COG1126	abc transporter atp-binding protein
AUT07_RS02355	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AUT07_RS02360	COG0321	lipoyl(octanoyl) transferase activity
AUT07_RS02370	COG0569	domain protein
AUT07_RS02375	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AUT07_RS02380	COG0242	peptide deformylase activity
AUT07_RS02385	COG0009	L-threonylcarbamoyladenylate synthase
AUT07_RS02390	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AUT07_RS02405	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AUT07_RS02410	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AUT07_RS02415	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AUT07_RS02420	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AUT07_RS02425	COG2914	Belongs to the UPF0125 (RnfH) family
AUT07_RS02430	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AUT07_RS02440	COG0330	HflC and HflK could
AUT07_RS02455	COG1177	transmembrane transport
AUT07_RS02470	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AUT07_RS02480	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AUT07_RS02485	COG3785	DNA binding
AUT07_RS02490	COG2920	part of a sulfur-relay system
AUT07_RS02500	COG1560	Kdo2-lipid A biosynthetic process
AUT07_RS02510	COG0418	dihydroorotase activity
AUT07_RS02525	COG2226	methyltransferase
AUT07_RS02530	COG3165	ubiquinone biosynthetic process from chorismate
AUT07_RS02540	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AUT07_RS02550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AUT07_RS02570	COG3021	interspecies interaction between organisms
AUT07_RS02580	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AUT07_RS02585	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AUT07_RS02610	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AUT07_RS02620	COG2890	protein-(glutamine-N5) methyltransferase activity
AUT07_RS02625	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AUT07_RS02630	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AUT07_RS02635	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AUT07_RS02640	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AUT07_RS02650	COG0012	GTP binding
AUT07_RS02665	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AUT07_RS02670	COG0482	sulfurtransferase activity
AUT07_RS02680	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AUT07_RS02690	COG0826	peptidase U32
AUT07_RS02695	COG0275	rRNA processing
AUT07_RS02700	COG3116	cell division
AUT07_RS02705	COG0768	penicillin binding
AUT07_RS02710	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AUT07_RS02715	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AUT07_RS02720	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AUT07_RS02725	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AUT07_RS02730	COG0772	Belongs to the SEDS family
AUT07_RS02735	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AUT07_RS02740	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AUT07_RS02745	COG1181	Belongs to the D-alanine--D-alanine ligase family
AUT07_RS02750	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AUT07_RS02755	COG0849	cell division
AUT07_RS02760	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AUT07_RS02775	COG0653	protein targeting
AUT07_RS02780	COG0167	dihydroorotate dehydrogenase activity
AUT07_RS02785	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AUT07_RS02790	COG0017	Asparaginyl-tRNA synthetase
AUT07_RS02795	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AUT07_RS02800	COG1448	Aminotransferase
AUT07_RS02805	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AUT07_RS02810	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AUT07_RS02815	COG2835	tetraacyldisaccharide 4'-kinase activity
AUT07_RS02820	COG1663	tetraacyldisaccharide 4'-kinase activity
AUT07_RS02825	COG1132	(ABC) transporter
AUT07_RS02830	COG0776	regulation of translation
AUT07_RS02835	COG0539	negative regulation of cytoplasmic translation
AUT07_RS02840	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AUT07_RS02845	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AUT07_RS02850	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AUT07_RS02855	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AUT07_RS02860	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AUT07_RS02860	COG0519	Catalyzes the synthesis of GMP from XMP
AUT07_RS02865	COG0517	IMP dehydrogenase activity
AUT07_RS02865	COG0516	GMP reductase activity
AUT07_RS02870	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUT07_RS02875	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AUT07_RS02880	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AUT07_RS02885	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AUT07_RS02890	COG0628	permease
AUT07_RS02895	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AUT07_RS02900	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AUT07_RS02905	COG1585	Membrane protein implicated in regulation of membrane protease activity
AUT07_RS02920	COG0307	riboflavin synthase, alpha
AUT07_RS02925	COG0772	Belongs to the SEDS family
AUT07_RS02930	COG0768	penicillin binding
AUT07_RS02935	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AUT07_RS02940	COG1466	dna polymerase III delta subunit
AUT07_RS02945	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
AUT07_RS02950	COG0495	leucyl-tRNA aminoacylation
AUT07_RS02955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AUT07_RS02965	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AUT07_RS02970	COG0210	DNA helicase
AUT07_RS02980	COG1511	domain protein
AUT07_RS02980	COG3264	Mechanosensitive ion channel
AUT07_RS02985	COG0688	phosphatidylethanolamine metabolic process
AUT07_RS02990	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AUT07_RS02995	COG0802	atpase or kinase
AUT07_RS03000	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUT07_RS03005	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AUT07_RS03010	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AUT07_RS03015	COG1923	regulation of RNA biosynthetic process
AUT07_RS03020	COG0330	HflC and HflK could
AUT07_RS03025	COG0330	HflC and HflK could
AUT07_RS03030	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AUT07_RS03035	COG0557	exoribonuclease II activity
AUT07_RS03040	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AUT07_RS03045	COG0360	Binds together with S18 to 16S ribosomal RNA
AUT07_RS03050	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AUT07_RS03060	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AUT07_RS03070	COG0142	geranyltranstransferase activity
AUT07_RS03075	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AUT07_RS03080	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AUT07_RS03085	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AUT07_RS03100	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AUT07_RS03105	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AUT07_RS03110	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AUT07_RS03125	COG0195	Participates in both transcription termination and antitermination
AUT07_RS03130	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AUT07_RS03135	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AUT07_RS03140	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AUT07_RS03150	COG1185	polyribonucleotide nucleotidyltransferase activity
AUT07_RS03155	COG0513	Belongs to the DEAD box helicase family
AUT07_RS03160	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
AUT07_RS03165	COG0540	Belongs to the ATCase OTCase family
AUT07_RS03170	COG0525	valine-tRNA ligase activity
AUT07_RS03175	COG2927	DNA polymerase III (CHI subunit)
AUT07_RS03180	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AUT07_RS03185	COG0795	lipopolysaccharide-transporting ATPase activity
AUT07_RS03190	COG0795	lipopolysaccharide-transporting ATPase activity
AUT07_RS03195	COG0166	Belongs to the GPI family
AUT07_RS03200	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AUT07_RS03205	COG2937	Belongs to the GPAT DAPAT family
AUT07_RS03230	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AUT07_RS03240	COG3118	belongs to the thioredoxin family
AUT07_RS03245	COG0018	arginyl-trna synthetase
AUT07_RS03250	COG0500	methyltransferase
AUT07_RS03255	COG2226	methyltransferase
AUT07_RS03260	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AUT07_RS03265	COG0494	nUDIX hydrolase
AUT07_RS03270	COG0217	transcriptional regulatory protein
AUT07_RS03275	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AUT07_RS03285	COG0492	ferredoxin-NADP+ reductase activity
AUT07_RS03295	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AUT07_RS03300	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AUT07_RS03310	COG0450	alkyl hydroperoxide reductase
AUT07_RS03315	COG0531	amino acid
AUT07_RS03320	COG0850	regulation of cytokinetic process
AUT07_RS03325	COG2894	cell division
AUT07_RS03330	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AUT07_RS03340	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AUT07_RS03345	COG0481	GTPase activity
AUT07_RS03360	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AUT07_RS03365	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AUT07_RS03375	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein