AUT07_RS00035	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS00035	SM01086	C-terminal, D2-small domain, of ClpB protein
AUT07_RS00040	SM00363	S4 RNA-binding domain
AUT07_RS00050	SM00977	TilS substrate C-terminal domain
AUT07_RS00060	SM00481	DNA polymerase alpha chain like domain
AUT07_RS00085	SM00935	Outer membrane protein (OmpH-like)
AUT07_RS00095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AUT07_RS00140	SM00855	Phosphoglycerate mutase family
AUT07_RS00165	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AUT07_RS00165	SM00292	breast cancer carboxy-terminal domain
AUT07_RS00165	SM00532	Ligase N family
AUT07_RS00190	SM00363	S4 RNA-binding domain
AUT07_RS00215	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS00255	SM00478	endonuclease III
AUT07_RS00255	SM00525	AUT07_RS00255
AUT07_RS00260	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AUT07_RS00265	SM00028	Tetratricopeptide repeats
AUT07_RS00280	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AUT07_RS00280	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AUT07_RS00280	SM00493	AUT07_RS00280
AUT07_RS00295	SM00155	Phospholipase D. Active site motifs.
AUT07_RS00300	SM00528	Domain in histone-like proteins of HNS family
AUT07_RS00320	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AUT07_RS00340	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS00345	SM00363	S4 RNA-binding domain
AUT07_RS00365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AUT07_RS00370	SM00822	AUT07_RS00370
AUT07_RS00420	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS00465	SM00479	AUT07_RS00465
AUT07_RS00530	SM00937	AUT07_RS00530
AUT07_RS00560	SM00564	beta-propeller repeat
AUT07_RS00655	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AUT07_RS00655	SM01232	AUT07_RS00655
AUT07_RS00685	SM00450	Rhodanese Homology Domain
AUT07_RS00805	SM00732	Likely ribonuclease with RNase H fold.
AUT07_RS00820	SM00257	Lysin motif
AUT07_RS00825	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AUT07_RS00825	SM00534	ATPase domain of DNA mismatch repair MUTS family
AUT07_RS00835	SM00662	RNA polymerases D
AUT07_RS00840	SM00363	S4 RNA-binding domain
AUT07_RS00840	SM01390	AUT07_RS00840
AUT07_RS00905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AUT07_RS00910	SM01374	AUT07_RS00910
AUT07_RS00930	SM00322	K homology RNA-binding domain
AUT07_RS00945	SM01382	AUT07_RS00945
AUT07_RS00945	SM01383	AUT07_RS00945
AUT07_RS00965	SM01403	AUT07_RS00965
AUT07_RS00975	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AUT07_RS00975	SM00474	3'-5' exonuclease
AUT07_RS00975	SM00475	5'-3' exonuclease
AUT07_RS00975	SM00482	DNA polymerase A domain
AUT07_RS00995	SM00072	Guanylate kinase homologues.
AUT07_RS01000	SM01409	AUT07_RS01000
AUT07_RS01005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUT07_RS01005	SM00954	Region found in RelA / SpoT proteins
AUT07_RS01020	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01040	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AUT07_RS01045	SM00861	Transketolase, pyrimidine binding domain
AUT07_RS01055	SM00479	AUT07_RS01055
AUT07_RS01070	SM01192	AUT07_RS01070
AUT07_RS01070	SM01193	AUT07_RS01070
AUT07_RS01080	SM00954	Region found in RelA / SpoT proteins
AUT07_RS01115	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01130	SM00883	Chaperonin 10 Kd subunit
AUT07_RS01155	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01160	SM01005	Alanine racemase, C-terminal domain
AUT07_RS01175	SM01323	AUT07_RS01175
AUT07_RS01215	SM00861	Transketolase, pyrimidine binding domain
AUT07_RS01245	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01255	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AUT07_RS01280	SM00873	B3/4 domain
AUT07_RS01280	SM00874	tRNA synthetase B5 domain
AUT07_RS01280	SM00896	Ferredoxin-fold anticodon binding domain
AUT07_RS01285	SM00411	bacterial (prokaryotic) histone like domain
AUT07_RS01295	SM00851	MGS-like domain
AUT07_RS01295	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AUT07_RS01300	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AUT07_RS01325	SM00904	Riboflavin kinase
AUT07_RS01335	SM00271	DnaJ molecular chaperone homology domain
AUT07_RS01360	SM00729	Elongator protein 3, MiaB family, Radical SAM
AUT07_RS01360	SM00876	Biotin and Thiamin Synthesis associated domain
AUT07_RS01390	SM00100	Cyclic nucleotide-monophosphate binding domain
AUT07_RS01390	SM00419	helix_turn_helix, cAMP Regulatory protein
AUT07_RS01395	SM00663	RNA polymerase I subunit A N-terminus
AUT07_RS01420	SM00649	Ribosomal protein L11/L12
AUT07_RS01425	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AUT07_RS01425	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AUT07_RS01440	SM00838	Elongation factor G C-terminus
AUT07_RS01440	SM00889	Elongation factor G, domain IV
AUT07_RS01500	SM01350	AUT07_RS01500
AUT07_RS01535	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01535	SM00994	ClpX C4-type zinc finger
AUT07_RS01535	SM01086	C-terminal, D2-small domain, of ClpB protein
AUT07_RS01540	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01540	SM00464	Found in ATP-dependent protease La (LON)
AUT07_RS01555	SM00927	DNA mismatch repair enzyme MutH
AUT07_RS01570	SM00861	Transketolase, pyrimidine binding domain
AUT07_RS01585	SM00881	CoA binding domain
AUT07_RS01605	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01605	SM01086	C-terminal, D2-small domain, of ClpB protein
AUT07_RS01635	SM00062	Bacterial periplasmic substrate-binding proteins
AUT07_RS01680	SM00825	Beta-ketoacyl synthase
AUT07_RS01730	SM01234	AUT07_RS01730
AUT07_RS01745	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01745	SM00760	Bacterial dnaA protein helix-turn-helix domain
AUT07_RS01750	SM00480	DNA polymerase III beta subunit
AUT07_RS01755	SM00387	Histidine kinase-like ATPases
AUT07_RS01755	SM00433	TopoisomeraseII
AUT07_RS01760	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AUT07_RS01775	SM01228	AUT07_RS01775
AUT07_RS01825	SM00840	AUT07_RS01825
AUT07_RS01850	SM00387	Histidine kinase-like ATPases
AUT07_RS01860	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01870	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AUT07_RS01895	SM01091	Transporter associated domain
AUT07_RS01900	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01900	SM00962	SRP54-type protein, GTPase domain
AUT07_RS01900	SM00963	SRP54-type protein, helical bundle domain
AUT07_RS01965	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS01985	SM00650	Ribosomal RNA adenine dimethylases
AUT07_RS02030	SM00434	DNA Topoisomerase IV
AUT07_RS02050	SM00387	Histidine kinase-like ATPases
AUT07_RS02050	SM00433	TopoisomeraseII
AUT07_RS02055	SM00434	DNA Topoisomerase IV
AUT07_RS02060	SM00563	Phosphate acyltransferases
AUT07_RS02070	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02085	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02085	SM00962	SRP54-type protein, GTPase domain
AUT07_RS02085	SM00963	SRP54-type protein, helical bundle domain
AUT07_RS02090	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02105	SM00878	Biotin carboxylase C-terminal domain
AUT07_RS02150	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02185	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AUT07_RS02210	SM00749	bacterial OsmY and nodulation domain
AUT07_RS02255	SM00905	Dihydroneopterin aldolase
AUT07_RS02270	SM00400	zinc finger
AUT07_RS02270	SM00493	AUT07_RS02270
AUT07_RS02270	SM00766	DNA primase DnaG DnaB-binding
AUT07_RS02335	SM00729	Elongator protein 3, MiaB family, Radical SAM
AUT07_RS02345	SM01091	Transporter associated domain
AUT07_RS02350	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02355	SM00729	Elongator protein 3, MiaB family, Radical SAM
AUT07_RS02405	SM00986	Uracil DNA glycosylase superfamily
AUT07_RS02405	SM00987	UreE urease accessory protein, C-terminal domain 
AUT07_RS02440	SM00244	prohibitin homologues
AUT07_RS02465	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02485	SM00992	Hemimethylated DNA-binding protein YccV like
AUT07_RS02515	SM00357	Cold shock protein domain
AUT07_RS02625	SM00937	AUT07_RS02625
AUT07_RS02640	SM01400	AUT07_RS02640
AUT07_RS02755	SM00842	Cell division protein FtsA
AUT07_RS02760	SM00864	Tubulin/FtsZ family, GTPase domain
AUT07_RS02760	SM00865	Tubulin/FtsZ family, C-terminal domain
AUT07_RS02775	SM00957	SecA DEAD-like domain
AUT07_RS02775	SM00958	SecA preprotein cross-linking domain
AUT07_RS02805	SM00849	Metallo-beta-lactamase superfamily
AUT07_RS02825	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS02830	SM00411	bacterial (prokaryotic) histone like domain
AUT07_RS02835	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS02865	SM00116	Domain in cystathionine beta-synthase and other proteins.
AUT07_RS02865	SM01240	AUT07_RS02865
AUT07_RS02880	SM01130	AUT07_RS02880
AUT07_RS02955	SM00155	Phospholipase D. Active site motifs.
AUT07_RS02990	SM00479	AUT07_RS02990
AUT07_RS03000	SM00646	AUT07_RS03000
AUT07_RS03005	SM01340	AUT07_RS03005
AUT07_RS03020	SM00244	prohibitin homologues
AUT07_RS03025	SM00244	prohibitin homologues
AUT07_RS03030	SM00788	Adenylosuccinate synthetase
AUT07_RS03035	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS03035	SM00357	Cold shock protein domain
AUT07_RS03035	SM00955	AUT07_RS03035
AUT07_RS03040	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AUT07_RS03095	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS03125	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS03145	SM01387	AUT07_RS03145
AUT07_RS03150	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS03150	SM00322	K homology RNA-binding domain
AUT07_RS03155	SM00487	DEAD-like helicases superfamily
AUT07_RS03155	SM00490	helicase superfamily c-terminal domain
AUT07_RS03205	SM00563	Phosphate acyltransferases
AUT07_RS03235	SM00357	Cold shock protein domain
AUT07_RS03235	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS03235	SM00959	Rho termination factor, N-terminal domain
AUT07_RS03245	SM00836	DALR anticodon binding domain
AUT07_RS03245	SM01016	Arginyl tRNA synthetase N terminal dom
AUT07_RS03290	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS03295	SM00382	ATPases associated with a variety of cellular activities
AUT07_RS03300	SM00316	Ribosomal protein S1-like RNA-binding domain
AUT07_RS03355	SM00358	Double-stranded RNA binding motif
AUT07_RS03355	SM00535	Ribonuclease III family
