locus_tag old_locus_tag gene Name start end strand product note type ID NCBI AUT07_RS00005 AUT07_00001 AUT07_RS00005 356 751 - hypothetical protein gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00005 AUT07_RS00010 AUT07_00002 AUT07_RS00010 766 1239 - hypothetical protein gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00010 AUT07_RS00015 AUT07_00003 tolB tolB 1287 2579 - translocation protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00015 AUT07_RS00020 AUT07_00004 AUT07_RS00020 3170 3280 - cyd operon protein YbgT gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00020 AUT07_RS00025 AUT07_00005 AUT07_RS00025 3296 4435 - cytochrome d ubiquinol oxidase subunit 2 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00025 AUT07_RS00030 AUT07_00006 AUT07_RS00030 4484 5995 - cytochrome d terminal oxidase subunit 1 part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00030 AUT07_RS00035 AUT07_00007 AUT07_RS00035 6485 8647 - ATP-dependent chaperone ClpB incomplete%3B partial in the middle of a contig%3B missing start gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00035 AUT07_RS00040 AUT07_00008 rluD rluD 9025 9975 - 23S rRNA pseudouridylate synthase responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00040 AUT07_RS00045 AUT07_00009 AUT07_RS00045 10108 10857 + membrane biogenesis protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00045 AUT07_RS00050 AUT07_00010 tilS tilS 11217 12557 - tRNA lysidine(34) synthetase TilS Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00050 AUT07_RS00055 AUT07_00011 AUT07_RS00055 12669 13628 - acetyl-CoA carboxylase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00055 AUT07_RS00060 AUT07_00012 dnaE dnaE 13640 17122 - DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00060 AUT07_RS00065 AUT07_00013 lpxB lpxB 17494 18645 - lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00065 AUT07_RS00070 AUT07_00014 AUT07_RS00070 18696 19493 - acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00070 AUT07_RS00075 AUT07_00015 AUT07_RS00075 19508 19960 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00075 AUT07_RS00080 AUT07_00016 lpxD lpxD 20073 21104 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00080 AUT07_RS00085 AUT07_00017 AUT07_RS00085 21108 21599 - hypothetical protein gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00085 AUT07_RS00090 AUT07_00018 AUT07_RS00090 21671 24079 - outer membrane protein assembly factor BamA part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00090 AUT07_RS00095 AUT07_00019 AUT07_RS00095 24122 25471 - zinc metallopeptidase RseP catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00095 AUT07_RS00100 AUT07_00020 AUT07_RS00100 25488 26360 - CDP-diglyceride synthetase gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00100 AUT07_RS00105 AUT07_00021 AUT07_RS00105 26353 27102 - UDP pyrophosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00105 AUT07_RS00110 AUT07_00022 AUT07_RS00110 27291 28493 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00110 AUT07_RS00115 AUT07_00023 frr frr 28587 29144 - ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00115 AUT07_RS00120 AUT07_00024 AUT07_RS00120 29318 30046 - UMP kinase gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00120 AUT07_RS00125 AUT07_00025 tsf tsf 30176 30991 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00125 AUT07_RS00130 AUT07_00026 AUT07_RS00130 31155 31838 - 30S ribosomal protein S2 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00130 AUT07_RS00135 AUT07_00027 AUT07_RS00135 32310 33107 + methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00135 AUT07_RS00140 AUT07_00028 gpmA gpmA 33779 34474 + phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00140 AUT07_RS00145 AUT07_00029 AUT07_RS00145 34860 34932 - tRNA-Lys tRNA gene28 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00145 AUT07_RS00150 AUT07_00030 AUT07_RS00150 34969 35041 - tRNA-Val tRNA gene29 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00150 AUT07_RS00155 AUT07_00031 gltX gltX 35310 36731 + glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00155 AUT07_RS00160 AUT07_00032 AUT07_RS00160 36880 36952 + tRNA-Ala tRNA gene31 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00160 AUT07_RS00165 AUT07_00033 ligA ligA 37574 39580 - DNA ligase (NAD(+)) LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00165 AUT07_RS00170 AUT07_00034 AUT07_RS00170 41530 41793 + PTS sugar transporter gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00170 AUT07_RS00175 AUT07_00035 AUT07_RS00175 41935 43674 + phosphoenolpyruvate--protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00175 AUT07_RS00180 AUT07_00036 AUT07_RS00180 43714 44223 + PTS glucose transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00180 AUT07_RS00185 AUT07_00037 AUT07_RS00185 44574 45203 + pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00185 AUT07_RS00190 AUT07_00038 AUT07_RS00190 45335 46612 + tyrosine--tRNA ligase gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00190 AUT07_RS00195 AUT07_00039 AUT07_RS00195 46872 47396 + single-stranded DNA-binding protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00195 AUT07_RS00200 AUT07_00040 AUT07_RS00200 47543 48901 + permease gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00200 AUT07_RS00205 AUT07_00041 AUT07_RS00205 50850 52079 + multidrug transporter gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00205 AUT07_RS00210 AUT07_00042 AUT07_RS00210 52601 53803 + outer membrane-specific lipoprotein transporter subunit LolC part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00210 AUT07_RS00215 AUT07_00043 lolD lolD 53796 54476 + lipoprotein ABC transporter ATP-binding protein outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00215 AUT07_RS00220 AUT07_00044 AUT07_RS00220 54507 55769 + outer membrane-specific lipoprotein transporter subunit LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00220 AUT07_RS00225 AUT07_00045 AUT07_RS00225 55979 56563 + electron transport complex subunit A gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00225 AUT07_RS00230 AUT07_00046 AUT07_RS00230 56560 57126 + hypothetical protein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00230 AUT07_RS00235 AUT07_00047 AUT07_RS00235 57167 58786 + hypothetical protein gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00235 AUT07_RS00240 AUT07_00048 AUT07_RS00240 58837 59898 + electron transport complex subunit D gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00240 AUT07_RS00245 AUT07_00049 AUT07_RS00245 59909 60202 + hypothetical protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00245 AUT07_RS00250 AUT07_00050 AUT07_RS00250 60442 61104 + electron transport complex subunit RsxE gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00250 AUT07_RS00255 AUT07_00051 AUT07_RS00255 61137 61781 + endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00255 AUT07_RS00260 AUT07_00052 AUT07_RS00260 62050 62790 - orotidine 5'-phosphate decarboxylase gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00260 AUT07_RS00265 AUT07_00053 AUT07_RS00265 62814 63983 - hypothetical protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00265 AUT07_RS00270 AUT07_00054 AUT07_RS00270 64041 64310 - hypothetical protein gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00270 AUT07_RS00275 AUT07_00055 AUT07_RS00275 64800 65405 + GTP cyclohydrolase gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00275 AUT07_RS00280 AUT07_00056 AUT07_RS00280 65855 68446 - DNA topoisomerase I subunit omega catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00280 AUT07_RS00285 AUT07_00057 AUT07_RS00285 69147 69920 + YciK family oxidoreductase gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00285 AUT07_RS00290 AUT07_00058 AUT07_RS00290 70403 71155 + hypothetical protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00290 AUT07_RS00295 AUT07_00059 cls cls 72123 73583 + cardiolipin synthase A catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00295 AUT07_RS00300 AUT07_00060 AUT07_RS00300 74563 74979 + transcriptional regulator gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00300 AUT07_RS00305 AUT07_00061 AUT07_RS00305 75109 76017 - UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00305 AUT07_RS00310 AUT07_00062 AUT07_RS00310 76349 77158 + hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00310 AUT07_RS00315 AUT07_00063 AUT07_RS00315 77514 79394 + signal peptide peptidase SppA SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00315 AUT07_RS00320 AUT07_00064 AUT07_RS00320 79948 80943 + glyceraldehyde-3-phosphate dehydrogenase gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00320 AUT07_RS00325 AUT07_00065 nhaB nhaB 81319 82860 + Na+/H+ antiporter NhaB involved in regulation of intracellular pH under alkaline conditions gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00325 AUT07_RS00330 AUT07_00066 AUT07_RS00330 82949 83467 + hypothetical protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00330 AUT07_RS00335 AUT07_00067 sbcB sbcB 83624 85066 + exodeoxyribonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00335 AUT07_RS00340 AUT07_00068 AUT07_RS00340 85207 88206 - hypothetical protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00340 AUT07_RS00345 AUT07_00069 AUT07_RS00345 88815 89771 + 23S rRNA pseudouridylate synthase catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00345 AUT07_RS00350 AUT07_00070 rpmF rpmF 90381 90551 + 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00350 AUT07_RS00355 AUT07_00071 AUT07_RS00355 90602 91639 + phosphate acyltransferase gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00355 AUT07_RS00360 AUT07_00072 AUT07_RS00360 91646 92602 + 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00360 AUT07_RS00365 AUT07_00073 AUT07_RS00365 92621 93553 + malonyl CoA-ACP transacylase gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00365 AUT07_RS00370 AUT07_00074 fabG fabG 93561 94295 + beta-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00370 AUT07_RS00375 AUT07_00075 AUT07_RS00375 94448 94711 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00375 AUT07_RS00380 AUT07_00076 AUT07_RS00380 94832 95668 + hypothetical protein gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00380 AUT07_RS00385 AUT07_00077 AUT07_RS00385 96136 96816 + thymidylate kinase gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00385 AUT07_RS00390 AUT07_00078 AUT07_RS00390 96782 97768 + hypothetical protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00390 AUT07_RS00395 AUT07_00079 AUT07_RS00395 97780 98565 + DNAse gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00395 AUT07_RS00400 AUT07_00080 AUT07_RS00400 98599 98949 + histidine triad nucleotide-binding protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00400 AUT07_RS00405 AUT07_00081 AUT07_RS00405 99464 100030 + hypothetical protein gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00405 AUT07_RS00410 AUT07_00082 sufA sufA 100875 101243 + Fe-S cluster assembly scaffold SufA functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00410 AUT07_RS00415 AUT07_00083 AUT07_RS00415 101272 102771 + FeS cluster assembly protein SufB with SufCD activates cysteine desulfurase SufS gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00415 AUT07_RS00420 AUT07_00084 sufC sufC 102815 103558 + Fe-S cluster assembly ATPase SufC part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00420 AUT07_RS00425 AUT07_00085 AUT07_RS00425 103536 104858 + Fe-S cluster assembly protein SufD gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00425 AUT07_RS00430 AUT07_00086 AUT07_RS00430 104860 106116 + cysteine sulfinate desulfinase gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00430 AUT07_RS00435 AUT07_00087 AUT07_RS00435 106148 106585 + cysteine desufuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00435 AUT07_RS00440 AUT07_00088 AUT07_RS00440 106626 107639 + peptidoglycan-binding protein internal stop gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00440 AUT07_RS00445 AUT07_00089 AUT07_RS00445 107704 107940 - murein lipoprotein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00445 AUT07_RS00450 AUT07_00090 AUT07_RS00450 108289 109701 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00450 AUT07_RS00455 AUT07_RS00455 AUT07_RS00455 109836 110015 - hypothetical protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00455 AUT07_RS00460 AUT07_00091 AUT07_RS00460 110244 110600 + glutaredoxin gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00460 AUT07_RS00465 AUT07_00092 AUT07_RS00465 110690 111331 - ribonuclease T gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00465 AUT07_RS00470 AUT07_00093 AUT07_RS00470 112051 113352 + NADH dehydrogenase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00470 AUT07_RS00475 AUT07_00094 AUT07_RS00475 113771 115198 + sodium:alanine symporter gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00475 AUT07_RS00480 AUT07_00095 AUT07_RS00480 116439 116987 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00480 AUT07_RS00485 AUT07_00096 AUT07_RS00485 117110 117182 + tRNA-Gly tRNA gene96 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00485 AUT07_RS00490 AUT07_00097 AUT07_RS00490 117224 117294 + tRNA-Cys tRNA gene97 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00490 AUT07_RS00495 AUT07_00098 AUT07_RS00495 117331 117418 + tRNA-Leu tRNA gene98 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00495 AUT07_RS00500 AUT07_00099 AUT07_RS00500 117625 118482 - mechanosensitive ion channel protein MscS participates in the regulation of osmotic pressure changes within the cel gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00500 AUT07_RS00505 AUT07_00100 AUT07_RS00505 119498 120163 + ribose-5-phosphate isomerase catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00505 AUT07_RS00510 AUT07_00101 AUT07_RS00510 120793 121956 + 2-octaprenyl-6-methoxyphenyl hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00510 AUT07_RS00515 AUT07_00102 AUT07_RS00515 122001 123224 + 2-octaprenylphenol hydroxylase gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00515 AUT07_RS00520 AUT07_00103 AUT07_RS00520 123415 124371 - hypothetical protein gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00520 AUT07_RS00525 AUT07_00104 lysS lysS 124866 126377 - lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00525 AUT07_RS00530 AUT07_00105 AUT07_RS00530 126385 127482 - peptide chain release factor 2 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00530 AUT07_RS00535 AUT07_00106 AUT07_RS00535 128298 129230 + cobalt transporter gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00535 AUT07_RS00540 AUT07_00107 AUT07_RS00540 129805 130848 + UDP-glucose 4-epimerase gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00540 AUT07_RS00545 AUT07_00108 AUT07_RS00545 131172 133331 - phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00545 AUT07_RS00550 AUT07_00109 AUT07_RS00550 133400 134614 - acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00550 AUT07_RS00555 AUT07_00110 AUT07_RS00555 135122 136562 - ribosome biogenesis GTPase Der frameshifted gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00555 AUT07_RS00560 AUT07_00111 AUT07_RS00560 136666 137844 - outer membrane protein assembly factor BamB gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00560 AUT07_RS00565 AUT07_00112 AUT07_RS00565 137858 138505 - hypothetical protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00565 AUT07_RS00570 AUT07_00113 hisS hisS 138489 139769 - histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00570 AUT07_RS00575 AUT07_00114 AUT07_RS00575 139906 141027 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00575 AUT07_RS00580 AUT07_00115 AUT07_RS00580 141596 142111 - hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00580 AUT07_RS00585 AUT07_00116 AUT07_RS00585 142358 143524 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00585 AUT07_RS00590 AUT07_00117 AUT07_RS00590 144631 145773 - cysteine desulfurase IscS catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00590 AUT07_RS00595 AUT07_00118 AUT07_RS00595 147023 147802 + inositol monophosphatase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00595 AUT07_RS00600 AUT07_00119 AUT07_RS00600 148087 148956 - hypothetical protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00600 AUT07_RS00605 AUT07_00120 rph rph 149082 149798 + ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00605 AUT07_RS00610 AUT07_00121 pyrE pyrE 149897 150543 + orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate%3B frameshifted gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00610 AUT07_RS00615 AUT07_00122 AUT07_RS00615 150580 151035 - deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00615 AUT07_RS00620 AUT07_00123 AUT07_RS00620 151013 152227 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00620 AUT07_RS00625 AUT07_00124 rpmB rpmB 152822 153040 + 50S ribosomal protein L28 required for 70S ribosome assembly%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00625 AUT07_RS00630 AUT07_00125 rpmG rpmG 153087 153254 + 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00630 AUT07_RS00635 AUT07_00126 AUT07_RS00635 153869 154984 + glucosyltransferase I RfaG catalyzes the addition of the first glucose residue to the LPS core gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00635 AUT07_RS00640 AUT07_00127 AUT07_RS00640 155164 156189 + lipopolysaccharide 1%2C3-galactosyltransferase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00640 AUT07_RS00645 AUT07_00128 AUT07_RS00645 156255 157205 + hypothetical protein gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00645 AUT07_RS00650 AUT07_00129 AUT07_RS00650 157459 158661 - hypothetical protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00650 AUT07_RS00655 AUT07_00130 AUT07_RS00655 158760 159569 + formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00655 AUT07_RS00660 AUT07_00131 coaD coaD 159560 160072 - phosphopantetheine adenylyltransferase Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00660 AUT07_RS00665 AUT07_00132 AUT07_RS00665 160271 161545 + 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00665 AUT07_RS00670 AUT07_00133 AUT07_RS00670 161823 162803 - ADP-heptose--LPS heptosyltransferase gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00670 AUT07_RS00675 AUT07_00134 AUT07_RS00675 162784 163854 - ADP-heptose--LPS heptosyltransferase catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00675 AUT07_RS00680 AUT07_00135 rfaD rfaD 163871 164809 - ADP-L-glycero-D-mannoheptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00680 AUT07_RS00685 AUT07_00136 AUT07_RS00685 165340 165777 + hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00685 AUT07_RS00690 AUT07_00137 AUT07_RS00690 165865 166338 + preprotein translocase subunit SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00690 AUT07_RS00695 AUT07_00138 AUT07_RS00695 166338 167363 + glycerol-3-phosphate dehydrogenase gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00695 AUT07_RS00700 AUT07_00139 AUT07_RS00700 168274 168672 + glycerol-3-phosphate cytidylyltransferase gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00700 AUT07_RS00705 AUT07_00140 AUT07_RS00705 168669 169805 + hypothetical protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00705 AUT07_RS00710 AUT07_00141 AUT07_RS00710 169774 170049 + hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00710 AUT07_RS00715 AUT07_00142 AUT07_RS00715 170046 170900 + hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00715 AUT07_RS00720 AUT07_00143 AUT07_RS00720 170897 171946 + hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00720 AUT07_RS00725 AUT07_00144 AUT07_RS00725 171954 173345 + hypothetical protein gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00725 AUT07_RS00730 AUT07_00145 AUT07_RS00730 173347 174501 + hypothetical protein gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00730 AUT07_RS00735 AUT07_00146 AUT07_RS00735 174501 175598 + hypothetical protein gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00735 AUT07_RS00740 AUT07_00147 AUT07_RS00740 175588 176796 + hypothetical protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00740 AUT07_RS00745 AUT07_00148 AUT07_RS00745 176799 177833 + UDP-glucose 4-epimerase gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00745 AUT07_RS00750 AUT07_00149 AUT07_RS00750 177836 178963 + hypothetical protein gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00750 AUT07_RS00755 AUT07_00150 AUT07_RS00755 178953 180086 + UDP-N-acetyl glucosamine 2-epimerase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00755 AUT07_RS00760 AUT07_00151 AUT07_RS00760 180210 181643 - dihydrolipoamide dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00760 AUT07_RS00765 AUT07_00152 AUT07_RS00765 181840 183477 - hypothetical protein gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00765 AUT07_RS00770 AUT07_00153 aceE aceE 183490 186153 - pyruvate dehydrogenase E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00770 AUT07_RS00775 AUT07_00154 coaE coaE 186919 187521 - dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00775 AUT07_RS00780 AUT07_00155 trmB trmB 188134 188826 - tRNA (guanosine(46)-N7)-methyltransferase TrmB tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00780 AUT07_RS00785 AUT07_00156 AUT07_RS00785 189482 189712 + Fe(2+)-trafficking protein protects iron-sulfur proteins against oxidative damage gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00785 AUT07_RS00790 AUT07_00157 mltC mltC 189780 190856 + murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00790 AUT07_RS00795 AUT07_00158 AUT07_RS00795 191283 192421 - YggW family oxidoreductase frameshifted%3B internal stop gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00795 AUT07_RS00800 AUT07_00159 AUT07_RS00800 192524 193111 - hypothetical protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00800 AUT07_RS00805 AUT07_00160 AUT07_RS00805 193726 194145 - crossover junction endodeoxyribonuclease RuvA similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00805 AUT07_RS00810 AUT07_00161 AUT07_RS00810 194426 195397 - glutathione synthetase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00810 AUT07_RS00815 AUT07_00162 AUT07_RS00815 195613 195951 - hypothetical protein gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00815 AUT07_RS00820 AUT07_00163 AUT07_RS00820 198094 199155 + hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00820 AUT07_RS00825 AUT07_00164 AUT07_RS00825 199379 201946 - DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00825 AUT07_RS00830 AUT07_00165 rplQ rplQ 202379 202771 - 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00830 AUT07_RS00835 AUT07_00166 AUT07_RS00835 202812 203801 - DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00835 AUT07_RS00840 AUT07_00167 AUT07_RS00840 203826 204446 - 30S ribosomal protein S4 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00840 AUT07_RS00845 AUT07_00168 AUT07_RS00845 204484 204873 - 30S ribosomal protein S11 gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00845 AUT07_RS00850 AUT07_00169 AUT07_RS00850 204893 205249 - 30S ribosomal protein S13 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00850 AUT07_RS00855 AUT07_00171 AUT07_RS00855 205382 205498 - 50S ribosomal protein L36 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00855 AUT07_RS00860 AUT07_00172 secY secY 205541 206869 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00860 AUT07_RS00865 AUT07_00173 AUT07_RS00865 206877 207311 - 50S ribosomal protein L15 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00865 AUT07_RS00870 AUT07_00174 rpmD rpmD 207336 207512 - 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00870 AUT07_RS00875 AUT07_00175 AUT07_RS00875 207521 208021 - 30S ribosomal protein S5 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00875 AUT07_RS00880 AUT07_00176 AUT07_RS00880 208041 208394 - 50S ribosomal protein L18 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00880 AUT07_RS00885 AUT07_00177 AUT07_RS00885 208418 208951 - 50S ribosomal protein L6 gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00885 AUT07_RS00890 AUT07_00178 AUT07_RS00890 208967 209359 - 30S ribosomal protein S8 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00890 AUT07_RS00895 AUT07_00179 rpsN rpsN 209388 209693 - 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00895 AUT07_RS00900 AUT07_00180 AUT07_RS00900 209708 210247 - 50S ribosomal protein L5 gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00900 AUT07_RS00905 AUT07_00181 rplX rplX 210264 210578 - 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00905 AUT07_RS00910 AUT07_00182 AUT07_RS00910 210598 210969 - 50S ribosomal protein L14 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00910 AUT07_RS00915 AUT07_00183 AUT07_RS00915 211276 211530 - 30S ribosomal protein S17 gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00915 AUT07_RS00920 AUT07_00184 AUT07_RS00920 211520 211726 - 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00920 AUT07_RS00925 AUT07_00185 AUT07_RS00925 211730 212140 - 50S ribosomal protein L16 gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00925 AUT07_RS00930 AUT07_00186 AUT07_RS00930 212140 212853 - 30S ribosomal protein S3 gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00930 AUT07_RS00935 AUT07_00187 AUT07_RS00935 212871 213203 - 50S ribosomal protein L22 gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00935 AUT07_RS00940 AUT07_00188 AUT07_RS00940 213224 213502 - 30S ribosomal protein S19 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00940 AUT07_RS00945 AUT07_00189 AUT07_RS00945 213522 214346 - 50S ribosomal protein L2 gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00945 AUT07_RS00950 AUT07_00190 rplW rplW 214360 214668 - 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00950 AUT07_RS00955 AUT07_00191 rplD rplD 214665 215270 - 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00955 AUT07_RS00960 AUT07_00192 AUT07_RS00960 215277 215927 - 50S ribosomal protein L3 gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00960 AUT07_RS00965 AUT07_00193 rpsJ rpsJ 215959 216270 - 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00965 AUT07_RS00970 AUT07_00194 AUT07_RS00970 217176 217793 + YihA family ribosome biogenesis GTP-binding protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00970 AUT07_RS00975 AUT07_00195 AUT07_RS00975 217941 220763 - DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00975 AUT07_RS00980 AUT07_00197 AUT07_RS00980 220987 221613 - protein disulfide isomerase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00980 AUT07_RS00985 AUT07_00198 glyS glyS 221713 223782 - glycine--tRNA ligase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00985 AUT07_RS00990 AUT07_00199 AUT07_RS00990 223799 224698 - glycine--tRNA ligase subunit alpha gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00990 AUT07_RS00995 AUT07_00200 AUT07_RS00995 225238 225861 + guanylate kinase gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS00995 AUT07_RS01000 AUT07_00201 AUT07_RS01000 225912 226145 + DNA-directed RNA polymerase subunit omega gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01000 AUT07_RS01005 AUT07_00202 AUT07_RS01005 226210 227691 + (p)ppGpp synthetase incomplete%3B partial in the middle of a contig%3B missing stop gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01005 AUT07_RS01010 AUT07_00203 AUT07_RS01010 228145 229488 - peptidase gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01010 AUT07_RS01015 AUT07_00204 znuA znuA 229507 230436 - zinc ABC transporter substrate-binding protein involved in transport of zinc(II) with ZnuA and C gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01015 AUT07_RS01020 AUT07_00205 znuC znuC 230542 231243 + Mn2+/Zn2+ABC transporter ATP-binding protein involved in transport of zinc(II) with ZnuA and C gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01020 AUT07_RS01025 AUT07_00206 znuB znuB 231301 232092 + high-affinity zinc transporter membrane component involved in transport of zinc(II) with ZnuA and C gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01025 AUT07_RS01030 AUT07_00207 AUT07_RS01030 232337 233416 - class II fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01030 AUT07_RS01035 AUT07_00208 AUT07_RS01035 233477 234634 - phosphoglycerate kinase gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01035 AUT07_RS01040 AUT07_00209 gapA gapA 234703 235740 - glyceraldehyde-3-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01040 AUT07_RS01045 AUT07_00210 AUT07_RS01045 235978 237972 - transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01045 AUT07_RS01050 AUT07_00211 AUT07_RS01050 238269 238345 - tRNA-Asp tRNA gene209 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01050 AUT07_RS01055 AUT07_00212 AUT07_RS01055 238455 239198 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01055 AUT07_RS01060 AUT07_00213 AUT07_RS01060 239253 239726 + ribonuclease H gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01060 AUT07_RS01065 AUT07_00214 AUT07_RS01065 239742 240443 - hypothetical protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01065 AUT07_RS01070 AUT07_00215 eno eno 241344 242627 - enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01070 AUT07_RS01075 AUT07_00216 pyrG pyrG 242678 244327 - CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01075 AUT07_RS01080 AUT07_00217 AUT07_RS01080 244892 245611 - hypothetical protein gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01080 AUT07_RS01085 AUT07_00218 AUT07_RS01085 247126 247470 - iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01085 AUT07_RS01090 AUT07_00219 mrcB mrcB 248448 250730 - penicillin-binding protein 1B penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01090 AUT07_RS01095 AUT07_00220 dksA dksA 251255 251710 + RNA polymerase-binding transcription factor gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01095 AUT07_RS01100 AUT07_RS01100 AUT07_RS01100 253192 253926 + hypothetical protein gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01100 AUT07_RS01105 AUT07_00222 AUT07_RS01105 254060 254539 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01105 AUT07_RS01110 AUT07_00223 AUT07_RS01110 254763 255533 - ABC transporter permease gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01110 AUT07_RS01115 AUT07_00224 AUT07_RS01115 255530 256477 - ABC transporter gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01115 AUT07_RS01120 AUT07_00225 AUT07_RS01120 256972 257499 - hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01120 AUT07_RS01125 AUT07_00226 groEL groEL 258756 260405 - molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01125 AUT07_RS01130 AUT07_00227 groES groES 260456 260749 - molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01130 AUT07_RS01135 AUT07_00228 AUT07_RS01135 261570 262220 - beta-phosphoglucomutase catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01135 AUT07_RS01140 AUT07_00229 AUT07_RS01140 262217 264949 - glycosyl hydrolase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01140 AUT07_RS01145 AUT07_00230 AUT07_RS01145 264991 266415 - PTS maltose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01145 AUT07_RS01150 AUT07_00231 AUT07_RS01150 266821 267861 + tRNA dihydrouridine synthase DusA gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01150 AUT07_RS01155 AUT07_00232 AUT07_RS01155 268164 269564 + replicative DNA helicase unwinds double stranded DNA gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01155 AUT07_RS01160 AUT07_00233 alr alr 269596 270678 + alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01160 AUT07_RS01165 AUT07_00234 AUT07_RS01165 270966 271040 - tRNA-Arg tRNA gene232 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01165 AUT07_RS01170 AUT07_00235 AUT07_RS01170 271222 272079 + bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01170 AUT07_RS01175 AUT07_00236 yajC yajC 272889 273221 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01175 AUT07_RS01180 AUT07_00237 secD secD 273252 275099 + preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01180 AUT07_RS01185 AUT07_00238 AUT07_RS01185 275183 276046 + preprotein translocase subunit SecF gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01185 AUT07_RS01190 AUT07_00239 ribD ribD 276468 277583 + bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01190 AUT07_RS01195 AUT07_00240 ribH ribH 277709 278179 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01195 AUT07_RS01200 AUT07_00241 nusB nusB 278197 278616 + N utilization substance protein B Regulates rRNA biosynthesis by transcriptional antitermination gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01200 AUT07_RS01205 AUT07_00242 AUT07_RS01205 278698 279696 + thiamine monophosphate kinase catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01205 AUT07_RS01210 AUT07_00243 AUT07_RS01210 279689 280177 + phosphatidylglycerophosphatase hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01210 AUT07_RS01215 AUT07_00244 AUT07_RS01215 280226 282091 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01215 AUT07_RS01220 AUT07_00245 AUT07_RS01220 282211 283131 - geranyl transferase gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01220 AUT07_RS01225 AUT07_00246 AUT07_RS01225 284675 285244 - hypothetical protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01225 AUT07_RS01230 AUT07_00247 AUT07_RS01230 285366 286031 - 2-deoxyglucose-6-phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01230 AUT07_RS01235 AUT07_00248 AUT07_RS01235 286448 287287 - iron ABC transporter permease gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01235 AUT07_RS01240 AUT07_00249 AUT07_RS01240 287310 288188 - hypothetical protein gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01240 AUT07_RS01245 AUT07_00250 AUT07_RS01245 288293 289024 - iron ABC transporter permease incomplete%3B partial in the middle of a contig%3B missing stop gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01245 AUT07_RS01250 AUT07_00251 AUT07_RS01250 289026 289913 - iron-binding protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01250 AUT07_RS01255 AUT07_00252 thrS thrS 290864 292786 + threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01255 AUT07_RS01260 AUT07_00253 AUT07_RS01260 292813 293343 + translation initiation factor IF-3 gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01260 AUT07_RS01265 AUT07_00254 AUT07_RS01265 293415 293612 + 50S ribosomal protein L35 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01265 AUT07_RS01270 AUT07_00255 rplT rplT 293664 294008 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01270 AUT07_RS01275 AUT07_00256 AUT07_RS01275 294216 295199 + phenylalanine--tRNA ligase subunit alpha gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01275 AUT07_RS01280 AUT07_00257 pheT pheT 295213 297600 + phenylalanine--tRNA ligase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01280 AUT07_RS01285 AUT07_00258 ihfA ihfA 297605 297904 + integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01285 AUT07_RS01290 AUT07_00259 AUT07_RS01290 302824 304131 - branched-chain amino acid ABC transporter substrate-binding protein sodium:branched-chain amino acid symporter gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01290 AUT07_RS01295 AUT07_00260 carB carB 304567 307791 - carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01295 AUT07_RS01300 AUT07_00261 AUT07_RS01300 307805 308977 - carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01300 AUT07_RS01305 AUT07_00262 AUT07_RS01305 309578 310384 - 4-hydroxy-tetrahydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01305 AUT07_RS01310 AUT07_00263 ispH ispH 310525 311466 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01310 AUT07_RS01315 AUT07_00264 lspA lspA 311612 312121 - lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01315 AUT07_RS01320 AUT07_00265 ileS ileS 312096 314906 - isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01320 AUT07_RS01325 AUT07_00266 AUT07_RS01325 314915 315874 - bifunctional riboflavin kinase/FMN adenylyltransferase gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01325 AUT07_RS01330 AUT07_00267 rpsT rpsT 316310 316570 + 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01330 AUT07_RS01335 AUT07_00268 AUT07_RS01335 316891 318033 - molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01335 AUT07_RS01340 AUT07_00269 dnaK dnaK 318170 320089 - molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01340 AUT07_RS01345 AUT07_00270 AUT07_RS01345 320526 320921 - hypothetical protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01345 AUT07_RS01350 AUT07_00271 AUT07_RS01350 321363 322352 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01350 AUT07_RS01355 AUT07_00272 AUT07_RS01355 322376 323659 - adenosylmethionine--8-amino-7-oxononanoate transaminase catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01355 AUT07_RS01360 AUT07_00273 AUT07_RS01360 323757 324791 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01360 AUT07_RS01365 AUT07_00274 AUT07_RS01365 324788 325954 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01365 AUT07_RS01370 AUT07_00275 AUT07_RS01370 325957 326721 + malonyl-[acyl-carrier protein] O-methyltransferase BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01370 AUT07_RS01375 AUT07_00276 bioD bioD 326714 327394 + dethiobiotin synthase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01375 AUT07_RS01380 AUT07_00277 AUT07_RS01380 328332 329228 - threonine transporter RhtB gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01380 AUT07_RS01385 AUT07_00278 AUT07_RS01385 330283 330858 + anthranilate synthase TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01385 AUT07_RS01390 AUT07_00279 AUT07_RS01390 330950 331582 - Crp/Fnr family transcriptional regulator cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01390 AUT07_RS01395 AUT07_00280 AUT07_RS01395 332025 336245 - DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01395 AUT07_RS01400 AUT07_00281 rpoB rpoB 336379 340407 - DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01400 AUT07_RS01405 AUT07_00282 rplL rplL 340791 341162 - 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01405 AUT07_RS01410 AUT07_00283 rplJ rplJ 341223 341720 - 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01410 AUT07_RS01415 AUT07_00284 AUT07_RS01415 341985 342686 - 50S ribosomal protein L1 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01415 AUT07_RS01420 AUT07_00285 AUT07_RS01420 342690 343118 - 50S ribosomal protein L11 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01420 AUT07_RS01425 AUT07_00286 nusG nusG 343282 343827 - transcription termination/antitermination protein NusG Modulates Rho-dependent transcription termination gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01425 AUT07_RS01430 AUT07_00287 secE secE 343831 344214 - preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01430 AUT07_RS01435 AUT07_00288 tuf tuf 344492 345676 - elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01435 AUT07_RS01440 AUT07_00289 fusA fusA 345756 347867 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01440 AUT07_RS01445 AUT07_00290 AUT07_RS01445 347964 348434 - 30S ribosomal protein S7 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01445 AUT07_RS01450 AUT07_00291 AUT07_RS01450 348567 348941 - 30S ribosomal protein S12 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01450 AUT07_RS01455 AUT07_00292 AUT07_RS01455 349123 349428 - hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01455 AUT07_RS01460 AUT07_00293 AUT07_RS01460 349445 349804 - tRNA 2-thiouridine(34) synthase TusC in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01460 AUT07_RS01465 AUT07_00294 AUT07_RS01465 349813 350259 - tRNA 2-thiouridine(34) synthase TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01465 AUT07_RS01470 AUT07_00295 aroK aroK 352187 352717 + shikimate kinase type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01470 AUT07_RS01475 AUT07_00296 aroB aroB 352755 353843 + 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01475 AUT07_RS01480 AUT07_00297 AUT07_RS01480 354394 355215 + DNA adenine methylase gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01480 AUT07_RS01485 AUT07_00298 AUT07_RS01485 355261 355923 + ribulose phosphate epimerase gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01485 AUT07_RS01490 AUT07_00299 AUT07_RS01490 356344 357396 + tryptophan--tRNA ligase gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01490 AUT07_RS01495 AUT07_00300 AUT07_RS01495 357526 358998 - C4-dicarboxylate ABC transporter gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01495 AUT07_RS01500 AUT07_00301 AUT07_RS01500 359215 360621 - phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating) catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01500 AUT07_RS01505 AUT07_00302 AUT07_RS01505 361134 361724 - dCTP deaminase gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01505 AUT07_RS01510 AUT07_00303 metG metG 362833 364482 + methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01510 AUT07_RS01515 AUT07_00304 folE folE 365041 365709 - type I GTP cyclohydrolase I FolE involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01515 AUT07_RS01520 AUT07_00305 AUT07_RS01520 367060 367365 + hypothetical protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01520 AUT07_RS01525 AUT07_00306 AUT07_RS01525 367752 369068 + trigger factor gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01525 AUT07_RS01530 AUT07_00307 AUT07_RS01530 369628 370269 + ATP-dependent Clp protease proteolytic subunit gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01530 AUT07_RS01535 AUT07_00308 clpX clpX 370390 371688 + ATP-dependent Clp protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01535 AUT07_RS01540 AUT07_00309 AUT07_RS01540 371859 374201 + DNA-binding protein gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01540 AUT07_RS01545 AUT07_00310 dapD dapD 374369 375199 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01545 AUT07_RS01550 AUT07_00311 AUT07_RS01550 375477 376631 - S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01550 AUT07_RS01555 AUT07_00312 AUT07_RS01555 376848 377579 + DNA mismatch repair protein MutH gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01555 AUT07_RS01560 AUT07_00313 AUT07_RS01560 377997 381350 + hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01560 AUT07_RS01565 AUT07_00314 AUT07_RS01565 381694 382437 + metal-binding protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01565 AUT07_RS01570 AUT07_00315 AUT07_RS01570 383000 385825 + 2-oxoglutarate dehydrogenase subunit E1 gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01570 AUT07_RS01575 AUT07_00316 AUT07_RS01575 385841 387058 + dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01575 AUT07_RS01580 AUT07_00317 sucC sucC 387203 388369 + succinate--CoA ligase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01580 AUT07_RS01585 AUT07_00318 AUT07_RS01585 388372 389247 + succinate--CoA ligase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01585 AUT07_RS01590 AUT07_00319 AUT07_RS01590 389611 391650 + oligopeptidase A gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01590 AUT07_RS01595 AUT07_00320 AUT07_RS01595 392053 392718 - isoprenoid biosynthesis protein gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01595 AUT07_RS01600 AUT07_00321 AUT07_RS01600 393164 394651 - phosphate transporter PitA involved in the transport of inorganic phosphate gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01600 AUT07_RS01605 AUT07_00322 hslU hslU 395257 396588 - ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01605 AUT07_RS01610 AUT07_00323 AUT07_RS01610 396599 397129 - ATP-dependent protease subunit HslV heat shock protein involved in degradation of misfolded proteins gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01610 AUT07_RS01615 AUT07_00324 AUT07_RS01615 397486 397779 - hypothetical protein gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01615 AUT07_RS01620 AUT07_00325 AUT07_RS01620 398333 400528 - primosomal protein N' binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01620 AUT07_RS01625 AUT07_00326 rpmE rpmE 400743 400964 + 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01625 AUT07_RS01630 AUT07_00327 AUT07_RS01630 401402 402784 + hypothetical protein gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01630 AUT07_RS01635 AUT07_00328 AUT07_RS01635 403483 404307 + amino acid ABC transporter substrate-binding protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01635 AUT07_RS01640 AUT07_00329 AUT07_RS01640 404352 405095 + amino acid ABC transporter permease gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01640 AUT07_RS01645 AUT07_00330 AUT07_RS01645 405092 405802 + ABC transporter permease gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01645 AUT07_RS01650 AUT07_00331 AUT07_RS01650 407770 408342 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01650 AUT07_RS01655 AUT07_00332 AUT07_RS01655 409160 409642 - colicin V production protein membrane protein required for colicin V production gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01655 AUT07_RS01660 AUT07_00333 AUT07_RS01660 409869 411164 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01660 AUT07_RS01665 AUT07_00334 AUT07_RS01665 411245 412114 - acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01665 AUT07_RS01670 AUT07_00335 truA truA 412623 413429 - tRNA pseudouridine(38%2C39%2C40) synthase TruA mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01670 AUT07_RS01675 AUT07_00336 AUT07_RS01675 413710 414840 - erythronate-4-phosphate dehydrogenase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01675 AUT07_RS01680 AUT07_00337 AUT07_RS01680 415369 416592 - beta-ketoacyl-ACP synthase I FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01680 AUT07_RS01685 AUT07_00338 AUT07_RS01685 417429 418496 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01685 AUT07_RS01690 AUT07_00339 AUT07_RS01690 418599 419531 - ribosomal protein L3 N(5)-glutamine methyltransferase involved in methylation of ribosomal protein L3 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01690 AUT07_RS01695 AUT07_00340 AUT07_RS01695 420118 420680 - UDP pyrophosphate phosphatase frameshifted gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01695 AUT07_RS01700 AUT07_00341 AUT07_RS01700 421030 422007 + ATP-dependent 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01700 AUT07_RS01705 AUT07_00342 AUT07_RS01705 422625 423203 - Fe/S biogenesis protein NfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01705 AUT07_RS01710 AUT07_00343 AUT07_RS01710 423545 424363 + pimeloyl-[acyl-carrier protein] methyl ester esterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01710 AUT07_RS01715 AUT07_00344 AUT07_RS01715 424505 424587 - tRNA-Leu tRNA gene342 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01715 AUT07_RS01720 AUT07_00345 trmE trmE 424835 426202 - tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01720 AUT07_RS01725 AUT07_00346 AUT07_RS01725 426186 427814 - membrane protein insertase YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01725 AUT07_RS01730 AUT07_00347 AUT07_RS01730 427869 428081 - membrane protein insertion efficiency factor YidD gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01730 AUT07_RS01735 AUT07_00348 rnpA rnpA 428045 428401 - ribonuclease P protein component protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01735 AUT07_RS01740 AUT07_00349 rpmH rpmH 428428 428571 - 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01740 AUT07_RS01745 AUT07_00350 dnaA dnaA 429231 430616 + chromosomal replication initiation protein DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01745 AUT07_RS01750 AUT07_00351 AUT07_RS01750 430630 431733 + DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01750 AUT07_RS01755 AUT07_00352 gyrB gyrB 431994 434408 + DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01755 AUT07_RS01760 AUT07_00353 AUT07_RS01760 434434 435534 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01760 AUT07_RS01765 AUT07_00354 AUT07_RS01765 436058 437896 - glutamine--fructose-6-phosphate aminotransferase Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01765 AUT07_RS01770 AUT07_00355 glmU glmU 437970 439340 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01770 AUT07_RS01775 AUT07_00356 AUT07_RS01775 441322 443202 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01775 AUT07_RS01780 AUT07_00357 murB murB 444129 445175 + UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01780 AUT07_RS01785 AUT07_00358 AUT07_RS01785 445172 446143 + biotin--[acetyl-CoA-carboxylase] synthetase catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01785 AUT07_RS01790 AUT07_00359 AUT07_RS01790 446183 447136 - pantothenate kinase gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01790 AUT07_RS01795 AUT07_00360 AUT07_RS01795 447408 447483 + tRNA-Thr tRNA gene358 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01795 AUT07_RS01800 AUT07_00361 AUT07_RS01800 447500 447581 + tRNA-Tyr tRNA gene359 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01800 AUT07_RS01805 AUT07_00362 AUT07_RS01805 447611 447685 + tRNA-Gly tRNA gene360 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01805 AUT07_RS01810 AUT07_00363 AUT07_RS01810 447698 447774 + tRNA-Thr tRNA gene361 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01810 AUT07_RS01815 AUT07_00364 AUT07_RS01815 448494 448697 + transcriptional regulator with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01815 AUT07_RS01820 AUT07_00365 AUT07_RS01820 449385 451271 - hypothetical protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01820 AUT07_RS01825 AUT07_00366 cysS cysS 451425 452813 - cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01825 AUT07_RS01830 AUT07_00367 AUT07_RS01830 453185 453904 + UDP-2%2C3-diacylglucosamine hydrolase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01830 AUT07_RS01835 AUT07_00368 AUT07_RS01835 454897 456558 + cation:proton antiport protein YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01835 AUT07_RS01840 AUT07_00369 AUT07_RS01840 456873 457829 - ferrochelatase gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01840 AUT07_RS01845 AUT07_00370 adk adk 457957 458601 - adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01845 AUT07_RS01850 AUT07_00371 AUT07_RS01850 458779 460650 - molecular chaperone HtpG molecular chaperone gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01850 AUT07_RS01855 AUT07_00372 AUT07_RS01855 461016 461345 - hypothetical protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01855 AUT07_RS01860 AUT07_00373 AUT07_RS01860 462161 463243 - DNA polymerase III subunit gamma/tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01860 AUT07_RS01865 AUT07_00374 AUT07_RS01865 463885 464319 - tRNA adenosine(34) deaminase TadA gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01865 AUT07_RS01870 AUT07_00375 AUT07_RS01870 465422 468070 + alanine--tRNA ligase gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01870 AUT07_RS01875 AUT07_00376 AUT07_RS01875 468233 468415 + carbon storage regulator affects carbohydrate metabolism%3B has regulatory role in many processes gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01875 AUT07_RS01880 AUT07_00377 AUT07_RS01880 468797 468889 + tRNA-Ser tRNA gene375 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01880 AUT07_RS01885 AUT07_00378 AUT07_RS01885 468900 468974 + tRNA-Arg tRNA gene376 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01885 AUT07_RS01890 AUT07_00379 AUT07_RS01890 469155 470714 + glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01890 AUT07_RS01895 AUT07_00380 AUT07_RS01895 470787 472076 - magnesium/cobalt efflux protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01895 AUT07_RS01900 AUT07_00381 AUT07_RS01900 472682 474037 + signal recognition particle gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01900 AUT07_RS01905 AUT07_00382 rpsP rpsP 474165 474434 + 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01905 AUT07_RS01910 AUT07_00383 rimM rimM 474424 474978 + ribosome maturation factor RimM Essential for efficient processing of 16S rRNA gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01910 AUT07_RS01915 AUT07_00384 trmD trmD 475015 475767 + tRNA (guanosine(37)-N1)-methyltransferase TrmD methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01915 AUT07_RS01920 AUT07_00385 AUT07_RS01920 475850 476203 + 50S ribosomal protein L19 gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01920 AUT07_RS01925 AUT07_00386 AUT07_RS01925 476510 478231 - proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01925 AUT07_RS01930 AUT07_00387 AUT07_RS01930 478650 479237 + D%2CD-heptose 1%2C7-bisphosphate phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01930 AUT07_RS01935 AUT07_00388 AUT07_RS01935 479487 480113 + superoxide dismutase SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01935 AUT07_RS01940 AUT07_00389 AUT07_RS01940 480520 481371 - thymidylate synthase gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01940 AUT07_RS01945 AUT07_00390 AUT07_RS01945 481440 482342 - prolipoprotein diacylglyceryl transferase gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01945 AUT07_RS01950 AUT07_00391 AUT07_RS01950 482516 483013 - RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01950 AUT07_RS01955 AUT07_00392 tbpA tbpA 484076 485068 + thiamine ABC transporter substrate-binding protein part of the thiamine and TPP transport system tbpA-thiPQ gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01955 AUT07_RS01960 AUT07_00393 thiP thiP 485041 486645 + thiamine ABC transporter permease permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01960 AUT07_RS01965 AUT07_00394 thiQ thiQ 486638 487339 + thiamine ABC transporter ATP-binding protein with TbpA and ThiP is part of the thiamine and TPP transport system gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01965 AUT07_RS01970 AUT07_00395 AUT07_RS01970 488146 490494 + LPS biosynthesis protein is involved in outer membrane permeability gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01970 AUT07_RS01975 AUT07_00396 AUT07_RS01975 490591 491892 + hypothetical protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01975 AUT07_RS01980 AUT07_00397 pdxA pdxA 491901 492896 + 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01980 AUT07_RS01985 AUT07_00398 ksgA ksgA 492889 493707 + 16S rRNA methyltransferase in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01985 AUT07_RS01990 AUT07_00399 apaH apaH 493946 494767 + diadenosine tetraphosphatase hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01990 AUT07_RS01995 AUT07_00400 folA folA 494778 495266 - dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS01995 AUT07_RS02000 AUT07_00401 AUT07_RS02000 495464 496231 - triose-phosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02000 AUT07_RS02005 AUT07_00402 AUT07_RS02005 496443 497189 - ferredoxin--NADP(+) reductase gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02005 AUT07_RS02010 AUT07_00403 AUT07_RS02010 497642 499126 + lysine transporter gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02010 AUT07_RS02015 AUT07_00404 AUT07_RS02015 499300 500529 + tryptophan permease tryptophan transporter of high affinity gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02015 AUT07_RS02020 AUT07_00405 AUT07_RS02020 500996 501295 + 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02020 AUT07_RS02025 AUT07_00406 AUT07_RS02025 501578 501651 + tRNA-Pro tRNA gene404 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02025 AUT07_RS02030 AUT07_00407 AUT07_RS02030 502233 504749 - DNA gyrase subunit A incomplete%3B partial in the middle of a contig%3B missing stop gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02030 AUT07_RS02035 AUT07_00408 AUT07_RS02035 504903 505634 + bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase Involved in ubiquinone biosynthesis gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02035 AUT07_RS02040 AUT07_00409 AUT07_RS02040 505963 508254 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02040 AUT07_RS02045 AUT07_00410 AUT07_RS02045 508266 509402 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02045 AUT07_RS02050 AUT07_00411 AUT07_RS02050 509945 511840 + DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02050 AUT07_RS02055 AUT07_00412 AUT07_RS02055 511895 514150 + DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02055 AUT07_RS02060 AUT07_00413 AUT07_RS02060 514198 514929 + acyl-phosphate glycerol 3-phosphate acyltransferase catalyzes the formation of 1%2C2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02060 AUT07_RS02065 AUT07_00414 AUT07_RS02065 515595 519215 + hypothetical protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02065 AUT07_RS02070 AUT07_00415 AUT07_RS02070 519229 521076 + hypothetical protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02070 AUT07_RS02075 AUT07_00416 AUT07_RS02075 521254 521514 + tRNA 2-thiouridine(34) synthase TusA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02075 AUT07_RS02080 AUT07_00417 rsmD rsmD 521762 522337 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD catalyzes the methylation of 16S rRNA at position G966 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02080 AUT07_RS02085 AUT07_00418 AUT07_RS02085 522621 523586 + signal recognition particle-docking protein FtsY gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02085 AUT07_RS02090 AUT07_00419 AUT07_RS02090 523573 524235 + cell division ATP-binding protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02090 AUT07_RS02095 AUT07_00420 AUT07_RS02095 524237 525190 + hypothetical protein gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02095 AUT07_RS02100 AUT07_00421 AUT07_RS02100 525405 526256 + RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02100 AUT07_RS02105 AUT07_00422 AUT07_RS02105 526373 527719 - acetyl-CoA carboxylase biotin carboxylase subunit an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02105 AUT07_RS02110 AUT07_00423 AUT07_RS02110 527712 528203 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02110 AUT07_RS02115 AUT07_00424 AUT07_RS02115 528255 528728 - 3-dehydroquinate dehydratase gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02115 AUT07_RS02120 AUT07_00425 AUT07_RS02120 529326 530369 + rod shape-determining protein MreB gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02120 AUT07_RS02125 AUT07_00426 AUT07_RS02125 530472 531389 + rod shape-determining protein MreC in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02125 AUT07_RS02130 AUT07_00427 AUT07_RS02130 531495 531983 + rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02130 AUT07_RS02135 AUT07_00428 tldD tldD 532823 534268 + metalloprotease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02135 AUT07_RS02140 AUT07_00429 pmbA pmbA 534960 536300 + metalloprotease PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02140 AUT07_RS02145 AUT07_00430 AUT07_RS02145 536400 536867 - transcriptional regulator involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02145 AUT07_RS02150 AUT07_00431 AUT07_RS02150 537396 538121 - LPS export ABC transporter ATP-binding protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02150 AUT07_RS02155 AUT07_00432 AUT07_RS02155 538149 538646 - lipopolysaccharide transport periplasmic protein LptA LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02155 AUT07_RS02160 AUT07_00433 AUT07_RS02160 538708 539274 - LPS export ABC transporter periplasmic protein LptC gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02160 AUT07_RS02165 AUT07_00434 AUT07_RS02165 539299 539847 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02165 AUT07_RS02170 AUT07_00435 AUT07_RS02170 539864 540832 - D-arabinose 5-phosphate isomerase gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02170 AUT07_RS02175 AUT07_00436 AUT07_RS02175 541504 541758 + cell division protein BolA gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02175 AUT07_RS02180 AUT07_00437 AUT07_RS02180 541811 543076 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02180 AUT07_RS02185 AUT07_00438 AUT07_RS02185 543359 544786 - serine endoprotease DegQ gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02185 AUT07_RS02190 AUT07_RS02190 AUT07_RS02190 545475 545684 - hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02190 AUT07_RS02195 AUT07_00439 AUT07_RS02195 545941 546369 + 50S ribosomal protein L13 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02195 AUT07_RS02200 AUT07_00440 AUT07_RS02200 546389 546781 + 30S ribosomal protein S9 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02200 AUT07_RS02205 AUT07_00441 sspA sspA 547037 547669 + stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02205 AUT07_RS02210 AUT07_00442 AUT07_RS02210 548034 548609 - hypothetical protein gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02210 AUT07_RS02215 AUT07_00443 AUT07_RS02215 549124 549951 + 16S rRNA methyltransferase gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02215 AUT07_RS02220 AUT07_00444 rnpB rnpB 550037 550411 + RNase P RNA component class A ncRNA gene443 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02220 AUT07_RS02225 AUT07_00445 AUT07_RS02225 550714 551379 - hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02225 AUT07_RS02230 AUT07_00446 AUT07_RS02230 551844 552797 + hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02230 AUT07_RS02235 AUT07_00447 ribB ribB 553205 553864 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02235 AUT07_RS02240 AUT07_00448 AUT07_RS02240 554299 554559 + hypothetical protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02240 AUT07_RS02245 AUT07_00449 AUT07_RS02245 554562 555989 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02245 AUT07_RS02250 AUT07_00450 AUT07_RS02250 556430 557668 + multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02250 AUT07_RS02255 AUT07_00451 folB folB 557688 558038 - dihydroneopterin aldolase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02255 AUT07_RS02260 AUT07_00452 AUT07_RS02260 558616 559641 - tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02260 AUT07_RS02265 AUT07_00453 rpsU rpsU 559999 560214 + 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02265 AUT07_RS02270 AUT07_00454 dnaG dnaG 560311 562056 + DNA primase synthesizes RNA primers at the replication forks gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02270 AUT07_RS02275 AUT07_00455 AUT07_RS02275 562229 564034 + RNA polymerase subunit sigma sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02275 AUT07_RS02280 AUT07_00456 AUT07_RS02280 564223 564298 - tRNA-Met tRNA gene455 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02280 AUT07_RS02285 AUT07_00457 AUT07_RS02285 564535 565044 + hypothetical protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02285 AUT07_RS02290 AUT07_00458 AUT07_RS02290 565403 567037 - phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02290 AUT07_RS02295 AUT07_00459 AUT07_RS02295 567493 568284 + acyl-CoA esterase gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02295 AUT07_RS02300 AUT07_00460 AUT07_RS02300 568713 569219 + flavodoxin FldA An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02300 AUT07_RS02305 AUT07_00461 fur fur 569383 569838 + ferric uptake regulator negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02305 AUT07_RS02310 AUT07_00462 AUT07_RS02310 569936 571603 - glutamine--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02310 AUT07_RS02315 AUT07_00463 AUT07_RS02315 572220 572293 + tRNA-Met tRNA gene462 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02315 AUT07_RS02320 AUT07_00464 AUT07_RS02320 572304 572388 + tRNA-Leu tRNA gene463 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02320 AUT07_RS02325 AUT07_00465 AUT07_RS02325 572418 572492 + tRNA-Gln tRNA gene464 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02325 AUT07_RS02330 AUT07_00466 ubiF ubiF 572763 573959 - 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02330 AUT07_RS02335 AUT07_00467 AUT07_RS02335 574140 575489 + tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02335 AUT07_RS02340 AUT07_00468 AUT07_RS02340 575795 576253 + rRNA maturation RNase YbeY gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02340 AUT07_RS02345 AUT07_00469 AUT07_RS02345 576333 577229 + magnesium/cobalt efflux protein involved in the transport of magnesium and cobalt ions gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02345 AUT07_RS02350 AUT07_00470 artP artP 578907 579632 + arginine transporter ATP-binding subunit With ArtMQJI transports arginine across the inner membrane gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02350 AUT07_RS02355 AUT07_00471 AUT07_RS02355 579816 580781 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02355 AUT07_RS02360 AUT07_00472 AUT07_RS02360 580835 581467 - octanoyltransferase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02360 AUT07_RS02365 AUT07_00473 AUT07_RS02365 581535 581798 - hypothetical protein gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02365 AUT07_RS02370 AUT07_00474 trkA trkA 582407 583789 - potassium transporter peripheral membrane component involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02370 AUT07_RS02375 AUT07_00475 fmt fmt 584236 585189 - methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02375 AUT07_RS02380 AUT07_00476 AUT07_RS02380 585245 585754 - peptide deformylase gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02380 AUT07_RS02385 AUT07_00477 AUT07_RS02385 586232 586801 + L-threonylcarbamoyladenylate synthase TsaC involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02385 AUT07_RS02390 AUT07_00478 AUT07_RS02390 586807 587634 + shikimate dehydrogenase gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02390 AUT07_RS02395 AUT07_00479 AUT07_RS02395 588369 588441 + tRNA-Glu tRNA gene478 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02395 AUT07_RS02400 AUT07_00480 AUT07_RS02400 589139 592073 + 23S ribosomal RNA rRNA gene479 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02400 AUT07_RS02405 AUT07_00481 AUT07_RS02405 592790 593467 + uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02405 AUT07_RS02410 AUT07_00482 AUT07_RS02410 593503 594105 - molecular chaperone GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02410 AUT07_RS02415 AUT07_00483 ppnK ppnK 594388 595287 + NAD(+) kinase catalyzes the phosphorylation of NAD to NADP gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02415 AUT07_RS02420 AUT07_00484 AUT07_RS02420 595551 595892 + membrane biogenesis protein gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02420 AUT07_RS02425 AUT07_00485 AUT07_RS02425 595929 596225 - RnfH family protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02425 AUT07_RS02430 AUT07_00486 smpB smpB 596592 597077 + SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02430 AUT07_RS02435 AUT07_00487 ssrA ssrA 597125 597500 + transfer-messenger RNA tmRNA gene486 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02435 AUT07_RS02440 AUT07_00488 AUT07_RS02440 598083 598991 + protease gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02440 AUT07_RS02445 AUT07_00489 AUT07_RS02445 599190 599264 + tRNA-Arg tRNA gene488 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02445 AUT07_RS02450 AUT07_00490 potD potD 599391 600452 - spermidine/putrescine ABC transporter substrate-binding protein can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotD is a periplasmic component that binds the substrate gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02450 AUT07_RS02455 AUT07_00491 potC potC 600622 601389 - spermidine/putrescine ABC transporter permease can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02455 AUT07_RS02460 AUT07_00492 potB potB 601398 602246 - spermidine/putrescine ABC transporter permease can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02460 AUT07_RS02465 AUT07_00493 potA potA 602236 603345 - Fe3+/spermidine/putrescine ABC transporter ATP-binding protein functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02465 AUT07_RS02470 AUT07_00494 AUT07_RS02470 604313 605569 - serine hydroxymethyltransferase gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02470 AUT07_RS02475 AUT07_00495 AUT07_RS02475 605887 607512 - NAD synthetase NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02475 AUT07_RS02480 AUT07_00496 AUT07_RS02480 608450 608968 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02480 AUT07_RS02485 AUT07_00497 AUT07_RS02485 609948 610265 - heat-shock protein HspQ gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02485 AUT07_RS02490 AUT07_00498 AUT07_RS02490 610617 610946 - sulfur relay protein TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02490 AUT07_RS02495 AUT07_00499 AUT07_RS02495 611119 611204 + tRNA-Ser tRNA gene498 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02495 AUT07_RS02500 AUT07_00500 AUT07_RS02500 611674 612618 - lipid A biosynthesis lauroyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02500 AUT07_RS02505 AUT07_00501 AUT07_RS02505 613207 613283 + tRNA-Asn tRNA gene500 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02505 AUT07_RS02510 AUT07_00502 AUT07_RS02510 613440 614492 + dihydroorotase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02510 AUT07_RS02515 AUT07_00504 AUT07_RS02515 615054 615266 + cold-shock protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02515 AUT07_RS02520 AUT07_00505 AUT07_RS02520 615741 617081 + recombinase RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02520 AUT07_RS02525 AUT07_00506 ubiE ubiE 617169 617924 + ubiquinone biosynthesis methyltransferase UbiE Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02525 AUT07_RS02530 AUT07_00507 AUT07_RS02530 617926 618585 + hypothetical protein gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02530 AUT07_RS02535 AUT07_00508 ubiB ubiB 618566 620203 + ubiquinone biosynthesis regulatory protein kinase UbiB an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02535 AUT07_RS02540 AUT07_00509 AUT07_RS02540 621065 622540 + 3-octaprenyl-4-hydroxybenzoate decarboxylase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02540 AUT07_RS02545 AUT07_00510 fre fre 622551 623249 + NAD(P)H-flavin reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02545 AUT07_RS02550 AUT07_00511 AUT07_RS02550 623634 625085 + potassium transporter gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02550 AUT07_RS02555 AUT07_00512 AUT07_RS02555 625115 625638 + protoporphyrinogen oxidase frameshifted gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02555 AUT07_RS02560 AUT07_00513 AUT07_RS02560 626046 626119 + tRNA-Ile tRNA gene511 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02560 AUT07_RS02565 AUT07_00514 AUT07_RS02565 626171 626243 + tRNA-Ala tRNA gene512 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02565 AUT07_RS02570 AUT07_00515 AUT07_RS02570 626377 627159 + hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02570 AUT07_RS02575 AUT07_00516 AUT07_RS02575 627276 627569 + cell division protein FtsB gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02575 AUT07_RS02580 AUT07_00517 AUT07_RS02580 627614 628342 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02580 AUT07_RS02585 AUT07_00518 ispF ispF 628365 628844 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02585 AUT07_RS02590 AUT07_00519 AUT07_RS02590 629064 629139 - tRNA-Trp tRNA gene517 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02590 AUT07_RS02595 AUT07_00520 rrf rrf 629226 629343 - 5S ribosomal RNA rRNA gene518 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02595 AUT07_RS02600 AUT07_00521 AUT07_RS02600 629565 631137 - 16S ribosomal RNA rRNA gene519 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02600 AUT07_RS02605 AUT07_00522 AUT07_RS02605 631731 631818 + tRNA-Ser tRNA gene520 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02605 AUT07_RS02610 AUT07_00523 AUT07_RS02610 632005 632859 - 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02610 AUT07_RS02615 AUT07_00524 AUT07_RS02615 632891 633703 - hypothetical protein gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02615 AUT07_RS02620 AUT07_00525 AUT07_RS02620 633684 634538 - protein-(glutamine-N5) methyltransferase%2C release factor-specific HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02620 AUT07_RS02625 AUT07_00526 prfA prfA 634545 635621 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02625 AUT07_RS02630 AUT07_00527 AUT07_RS02630 636914 637576 + hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02630 AUT07_RS02635 AUT07_00528 AUT07_RS02635 637573 638439 + 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02635 AUT07_RS02640 AUT07_00529 AUT07_RS02640 638494 639441 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02640 AUT07_RS02645 AUT07_00530 AUT07_RS02645 639635 640228 + peptidyl-tRNA hydrolase gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02645 AUT07_RS02650 AUT07_00531 ychF ychF 640339 641439 + GTP-binding protein EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02650 AUT07_RS02655 AUT07_00532 pabB pabB 641918 643273 + aminodeoxychorismate synthase component I para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02655 AUT07_RS02660 AUT07_00533 AUT07_RS02660 643870 644661 - enoyl-ACP reductase Catalyzes a key regulatory step in fatty acid biosynthesis gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02660 AUT07_RS02665 AUT07_00534 AUT07_RS02665 644995 646389 - adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02665 AUT07_RS02670 AUT07_00535 mnmA mnmA 646972 648072 - tRNA 2-thiouridine(34) synthase MnmA catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02670 AUT07_RS02675 AUT07_00536 AUT07_RS02675 649303 649932 + transcriptional regulator negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02675 AUT07_RS02680 AUT07_00537 AUT07_RS02680 650077 650898 - glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02680 AUT07_RS02685 AUT07_00538 gmhA gmhA 651417 651995 + phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02685 AUT07_RS02690 AUT07_00539 AUT07_RS02690 652347 653678 - U32 family peptidase gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02690 AUT07_RS02695 AUT07_00540 AUT07_RS02695 654910 655887 + ribosomal RNA small subunit methyltransferase H gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02695 AUT07_RS02700 AUT07_00541 AUT07_RS02700 655895 656212 + hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02700 AUT07_RS02705 AUT07_00542 AUT07_RS02705 656240 658024 + cell division protein FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02705 AUT07_RS02710 AUT07_00543 murE murE 658011 659501 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02710 AUT07_RS02715 AUT07_00544 AUT07_RS02715 659498 660880 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02715 AUT07_RS02720 AUT07_00545 mraY mraY 660874 661956 + phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02720 AUT07_RS02725 AUT07_00546 murD murD 661959 663275 + UDP-N-acetylmuramoylalanine--D-glutamate ligase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02725 AUT07_RS02730 AUT07_00547 AUT07_RS02730 663303 664469 + cell division protein FtsW gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02730 AUT07_RS02735 AUT07_00548 murG murG 664466 665533 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02735 AUT07_RS02740 AUT07_00549 AUT07_RS02740 665600 667060 + UDP-N-acetylmuramate--alanine ligase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02740 AUT07_RS02745 AUT07_00550 ddl ddl 667079 667996 + D-alanine--D-alanine ligase D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02745 AUT07_RS02750 AUT07_00551 AUT07_RS02750 668001 668780 + hypothetical protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02750 AUT07_RS02755 AUT07_00552 ftsA ftsA 668867 670123 + cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02755 AUT07_RS02760 AUT07_00553 AUT07_RS02760 670181 671347 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02760 AUT07_RS02765 AUT07_00554 lpxC lpxC 671445 672362 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02765 AUT07_RS02770 AUT07_00555 AUT07_RS02770 672465 672944 - hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02770 AUT07_RS02775 AUT07_00556 secA secA 673491 676199 + preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02775 AUT07_RS02780 AUT07_00557 AUT07_RS02780 676386 677396 - dihydroorotate dehydrogenase catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02780 AUT07_RS02785 AUT07_00558 AUT07_RS02785 677964 679193 + nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02785 AUT07_RS02790 AUT07_00559 AUT07_RS02790 680118 681518 + asparagine--tRNA ligase gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02790 AUT07_RS02795 AUT07_00560 AUT07_RS02795 681828 682931 + porin allows for ions and hydrophilic solutes to cross the outer membrane gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02795 AUT07_RS02800 AUT07_00561 AUT07_RS02800 683221 684411 + aromatic amino acid aminotransferase gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02800 AUT07_RS02805 AUT07_00562 AUT07_RS02805 684485 685114 - hypothetical protein gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02805 AUT07_RS02810 AUT07_00563 AUT07_RS02810 685479 686219 - 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02810 AUT07_RS02815 AUT07_00564 AUT07_RS02815 686223 686402 - hypothetical protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02815 AUT07_RS02820 AUT07_00565 lpxK lpxK 686671 687663 - tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02820 AUT07_RS02825 AUT07_00566 AUT07_RS02825 687663 689408 - lipid A export permease/ATP-binding protein MsbA involved in the transport of lipid A across the inner membrane gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02825 AUT07_RS02830 AUT07_00567 ihfB ihfB 690310 690603 - integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02830 AUT07_RS02835 AUT07_00568 rpsA rpsA 690681 692348 - 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02835 AUT07_RS02840 AUT07_00569 AUT07_RS02840 692501 693175 - cytidylate kinase gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02840 AUT07_RS02845 AUT07_00570 AUT07_RS02845 693287 694570 - 3-phosphoshikimate 1-carboxyvinyltransferase gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02845 AUT07_RS02850 AUT07_00571 AUT07_RS02850 694684 695781 - 3-phosphoserine/phosphohydroxythreonine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02850 AUT07_RS02855 AUT07_00572 AUT07_RS02855 696765 697811 + phospho-2-dehydro-3-deoxyheptonate aldolase gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02855 AUT07_RS02860 AUT07_00573 guaA guaA 698283 699860 - GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02860 AUT07_RS02865 AUT07_00574 AUT07_RS02865 699934 701394 - IMP dehydrogenase gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02865 AUT07_RS02870 AUT07_00575 AUT07_RS02870 702530 703666 + succinyl-diaminopimelate desuccinylase gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02870 AUT07_RS02875 AUT07_00576 AUT07_RS02875 704019 704696 - hypothetical protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02875 AUT07_RS02880 AUT07_00577 AUT07_RS02880 704716 705618 - 4-hydroxy-tetrahydrodipicolinate synthase gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02880 AUT07_RS02885 AUT07_00578 bcp bcp 706139 706609 + thiol peroxidase bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02885 AUT07_RS02890 AUT07_00579 AUT07_RS02890 706691 707740 - permease gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02890 AUT07_RS02895 AUT07_00580 AUT07_RS02895 709961 710536 + spermidine acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02895 AUT07_RS02900 AUT07_00581 AUT07_RS02900 710589 712667 + RNA degradosome polyphosphate kinase gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02900 AUT07_RS02905 AUT07_00582 AUT07_RS02905 713012 713458 - hypothetical protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02905 AUT07_RS02910 AUT07_00583 AUT07_RS02910 714843 716378 + murein biosynthesis protein MurJ gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02910 AUT07_RS02915 AUT07_00584 AUT07_RS02915 716483 716556 - tRNA-Val tRNA gene582 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02915 AUT07_RS02920 AUT07_00585 AUT07_RS02920 716917 717540 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02920 AUT07_RS02925 AUT07_00586 AUT07_RS02925 718019 719134 - rod shape-determining protein RodA gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02925 AUT07_RS02930 AUT07_00587 AUT07_RS02930 719141 721051 - penicillin-binding protein 2 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02930 AUT07_RS02935 AUT07_00588 AUT07_RS02935 721738 722421 - nicotinate-nicotinamide nucleotide adenylyltransferase gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02935 AUT07_RS02940 AUT07_00589 holA holA 722405 723445 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02940 AUT07_RS02945 AUT07_00590 AUT07_RS02945 723507 723998 - LPS biosynthesis protein rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02945 AUT07_RS02950 AUT07_00591 leuS leuS 724028 726616 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02950 AUT07_RS02955 AUT07_00592 pssA pssA 727377 728735 + phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02955 AUT07_RS02960 AUT07_00593 AUT07_RS02960 728887 730086 + hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02960 AUT07_RS02965 AUT07_00594 dapF dapF 731155 731979 + diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02965 AUT07_RS02970 AUT07_00595 uvrD uvrD 732870 735038 + DNA helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02970 AUT07_RS02975 AUT07_00596 AUT07_RS02975 735144 736094 + magnesium transporter CorA responsible for the influx of magnesium ions gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02975 AUT07_RS02980 AUT07_00597 AUT07_RS02980 736662 739991 - mechanosensitive channel protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02980 AUT07_RS02985 AUT07_00598 AUT07_RS02985 740003 740944 - phosphatidylserine decarboxylase gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02985 AUT07_RS02990 AUT07_00599 AUT07_RS02990 741341 741886 + oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02990 AUT07_RS02995 AUT07_00600 AUT07_RS02995 742159 742656 + tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS02995 AUT07_RS03000 AUT07_00601 AUT07_RS03000 742637 743875 + hypothetical protein gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03000 AUT07_RS03005 AUT07_00602 AUT07_RS03005 743897 745828 + hypothetical protein gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03005 AUT07_RS03010 AUT07_00603 miaA miaA 745821 746795 + tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03010 AUT07_RS03015 AUT07_00604 hfq hfq 746938 747234 + RNA chaperone Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03015 AUT07_RS03020 AUT07_00605 AUT07_RS03020 748470 749699 + cell division protein FtsH with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03020 AUT07_RS03025 AUT07_00606 AUT07_RS03025 749702 750700 + protease modulator HflC with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03025 AUT07_RS03030 AUT07_00607 AUT07_RS03030 750888 752186 + adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03030 AUT07_RS03035 AUT07_00608 AUT07_RS03035 752300 754504 + exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03035 AUT07_RS03040 AUT07_00609 AUT07_RS03040 754606 755352 + 23S rRNA methyltransferase Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03040 AUT07_RS03045 AUT07_00610 rpsF rpsF 755564 755950 + 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03045 AUT07_RS03050 AUT07_00611 rpsR rpsR 756267 756494 + 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03050 AUT07_RS03055 AUT07_00612 rplI rplI 756534 756983 + 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03055 AUT07_RS03060 AUT07_00613 AUT07_RS03060 757994 758521 - inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03060 AUT07_RS03065 AUT07_00614 AUT07_RS03065 759120 760064 + malate dehydrogenase oxidizes malate to oxaloacetate gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03065 AUT07_RS03070 AUT07_00615 AUT07_RS03070 760214 761185 - octaprenyl diphosphate synthase gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03070 AUT07_RS03075 AUT07_00616 rplU rplU 761348 761656 + 50S ribosomal protein L21 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03075 AUT07_RS03080 AUT07_00617 rpmA rpmA 761679 761936 + 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03080 AUT07_RS03085 AUT07_00618 obgE obgE 762040 763086 + GTPase ObgE ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03085 AUT07_RS03090 AUT07_00619 AUT07_RS03090 763746 764222 + transcription elongation factor GreA gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03090 AUT07_RS03095 AUT07_00620 hflB hflB 764941 766773 + ATP-dependent metalloprotease inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins%3B incomplete%3B partial in the middle of a contig%3B missing stop gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03095 AUT07_RS03100 AUT07_00621 folP folP 767485 768333 + dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03100 AUT07_RS03105 AUT07_00622 glmM glmM 768326 769663 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03105 AUT07_RS03110 AUT07_00623 AUT07_RS03110 769807 770139 + hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03110 AUT07_RS03115 AUT07_00624 AUT07_RS03115 770203 770289 + tRNA-Leu tRNA gene622 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03115 AUT07_RS03120 AUT07_00625 AUT07_RS03120 770351 770426 + tRNA-Met tRNA gene623 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03120 AUT07_RS03125 AUT07_00626 nusA nusA 771127 772641 + transcription elongation factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03125 AUT07_RS03130 AUT07_00627 infB infB 772662 775280 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03130 AUT07_RS03135 AUT07_00628 AUT07_RS03135 775443 775856 + hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03135 AUT07_RS03140 AUT07_00629 truB truB 775853 776800 + tRNA pseudouridine(55) synthase TruB catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03140 AUT07_RS03145 AUT07_00630 AUT07_RS03145 776933 777196 + 30S ribosomal protein S15 gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03145 AUT07_RS03150 AUT07_00631 AUT07_RS03150 777449 779548 + polyribonucleotide nucleotidyltransferase gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03150 AUT07_RS03155 AUT07_00632 AUT07_RS03155 780161 781990 + DEAD/DEAH box helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03155 AUT07_RS03160 AUT07_00633 AUT07_RS03160 782419 782883 - aspartate carbamoyltransferase regulatory subunit involved in the allosteric regulation of aspartate carbamoyltransferase gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03160 AUT07_RS03165 AUT07_00634 AUT07_RS03165 782896 783831 - aspartate carbamoyltransferase catalytic subunit gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03165 AUT07_RS03170 AUT07_00635 AUT07_RS03170 784723 787626 - valine--tRNA ligase gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03170 AUT07_RS03175 AUT07_00636 AUT07_RS03175 787636 788097 - DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03175 AUT07_RS03180 AUT07_00637 AUT07_RS03180 788127 789641 - leucyl aminopeptidase catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03180 AUT07_RS03185 AUT07_00638 AUT07_RS03185 789948 791045 + LPS export ABC transporter permease LptF with LptBGC is involved in lipopolysaccharide export gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03185 AUT07_RS03190 AUT07_00639 AUT07_RS03190 791045 792121 + LPS export ABC transporter permease LptG with LptABCF is involved in the transport of lipopolysaccharides gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03190 AUT07_RS03195 AUT07_00640 pgi pgi 792365 794017 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03195 AUT07_RS03200 AUT07_00641 ubiA ubiA 794433 795299 + 4-hydroxybenzoate octaprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03200 AUT07_RS03205 AUT07_00642 AUT07_RS03205 795444 797897 - glycerol-3-phosphate 1-O-acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03205 AUT07_RS03210 AUT07_00643 AUT07_RS03210 798834 798907 - tRNA-Pro tRNA gene641 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03210 AUT07_RS03215 AUT07_00644 AUT07_RS03215 798981 799055 - tRNA-His tRNA gene642 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03215 AUT07_RS03220 AUT07_00645 AUT07_RS03220 799112 799185 - tRNA-Arg tRNA gene643 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03220 AUT07_RS03225 AUT07_00646 AUT07_RS03225 799349 800713 - D-alanine/D-serine/glycine permease involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03225 AUT07_RS03230 AUT07_00647 AUT07_RS03230 802489 803577 - UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03230 AUT07_RS03235 AUT07_00648 rho rho 803794 805053 - transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03235 AUT07_RS03240 AUT07_00649 AUT07_RS03240 805603 805929 - thioredoxin gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03240 AUT07_RS03245 AUT07_00650 AUT07_RS03245 806312 808042 - arginine--tRNA ligase gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03245 AUT07_RS03250 AUT07_00651 AUT07_RS03250 808579 809550 - tRNA 5-methoxyuridine(34) synthase CmoB catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03250 AUT07_RS03255 AUT07_00652 AUT07_RS03255 809557 810303 - tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03255 AUT07_RS03260 AUT07_00653 AUT07_RS03260 810681 812432 + aspartate--tRNA ligase gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03260 AUT07_RS03265 AUT07_00654 nudB nudB 812443 812880 + dihydroneopterin triphosphate diphosphatase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03265 AUT07_RS03270 AUT07_00655 AUT07_RS03270 812911 813627 + hypothetical protein gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03270 AUT07_RS03275 AUT07_00656 AUT07_RS03275 813784 815079 - serine--tRNA ligase gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03275 AUT07_RS03280 AUT07_00657 lolA lolA 815507 816118 - outer-membrane lipoprotein carrier protein LolA participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03280 AUT07_RS03285 AUT07_00658 AUT07_RS03285 816466 817443 + thioredoxin reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03285 AUT07_RS03290 AUT07_00659 AUT07_RS03290 817507 819279 + cysteine/glutathione ABC transporter permease/ATP-binding protein CydD in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03290 AUT07_RS03295 AUT07_00660 AUT07_RS03295 819279 821012 + cysteine/glutathione ABC transporter ATP-binding protein/permease CydC in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03295 AUT07_RS03300 AUT07_00661 AUT07_RS03300 821244 821462 + translation initiation factor IF-1 gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03300 AUT07_RS03305 AUT07_00662 AUT07_RS03305 821616 821688 - tRNA-Phe tRNA gene660 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03305 AUT07_RS03310 AUT07_00663 AUT07_RS03310 821897 822484 - alkyl hydroperoxide reductase with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03310 AUT07_RS03315 AUT07_00664 AUT07_RS03315 823067 824404 + arginine:ornithine antiporter gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03315 AUT07_RS03320 AUT07_00665 minC minC 824812 825501 + septum formation inhibitor blocks the formation of polar Z-ring septums gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03320 AUT07_RS03325 AUT07_00666 AUT07_RS03325 825530 826339 + septum site-determining protein MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03325 AUT07_RS03330 AUT07_00667 minE minE 826345 826611 + cell division topological specificity factor MinE works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03330 AUT07_RS03335 AUT07_00668 AUT07_RS03335 827082 827756 - hypothetical protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03335 AUT07_RS03340 AUT07_00669 AUT07_RS03340 827950 829422 - glucose-6-phosphate dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03340 AUT07_RS03345 AUT07_00670 AUT07_RS03345 830440 832242 + elongation factor 4 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03345 AUT07_RS03350 AUT07_00671 AUT07_RS03350 832261 833232 + S26 family signal peptidase catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03350 AUT07_RS03355 AUT07_00672 rnc rnc 833451 834125 + ribonuclease III cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03355 AUT07_RS03360 AUT07_00673 AUT07_RS03360 834122 835036 + GTPase Era gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03360 AUT07_RS03365 AUT07_00674 AUT07_RS03365 835166 835897 + pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03365 AUT07_RS03370 AUT07_00675 acpS acpS 835897 836277 + 4'-phosphopantetheinyl transferase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03370 AUT07_RS03375 AUT07_00676 AUT07_RS03375 836295 836531 - ferredoxin gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=AUT07_RS03375