ARUE_RS00110	PF08223	PaaX-like protein C-terminal domain
ARUE_RS00250	PF13391	ARUE_RS00250
ARUE_RS00840	PF03009	Glycerophosphoryl diester phosphodiesterase family
ARUE_RS00875	PF08922	Domain of unknown function (DUF1905)
ARUE_RS00910	PF07690	Major Facilitator Superfamily
ARUE_RS00925	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
ARUE_RS01020	PF00854	POT family
ARUE_RS01110	PF13439	Glycosyltransferase Family 4
ARUE_RS01350	PF00004	ATPase family associated with various cellular activities (AAA)
ARUE_RS01350	PF02861	Clp amino terminal domain
ARUE_RS01370	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
ARUE_RS01410	PF03610	PTS system fructose IIA component
ARUE_RS01445	PF10635	DisA bacterial checkpoint controller linker region
ARUE_RS01475	PF02626	Allophanate hydrolase subunit 2
ARUE_RS01475	PF02682	Allophanate hydrolase subunit 1
ARUE_RS01475	PF02785	Biotin carboxylase C-terminal domain
ARUE_RS01475	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ARUE_RS01620	PF01979	Amidohydrolase family
ARUE_RS01980	PF01068	ATP dependent DNA ligase domain
ARUE_RS02025	PF01028	Eukaryotic DNA topoisomerase I, catalytic core
ARUE_RS02030	PF01028	Eukaryotic DNA topoisomerase I, catalytic core
ARUE_RS02100	PF03636	Glycosyl hydrolase family 65, N-terminal domain
ARUE_RS02115	PF03632	Glycosyl hydrolase family 65 central catalytic domain
ARUE_RS02185	PF01593	Flavin containing amine oxidoreductase
ARUE_RS02385	PF01032	FecCD transport family
ARUE_RS02460	PF05088	ARUE_RS02460
ARUE_RS02465	PF05088	ARUE_RS02465
ARUE_RS02565	PF01925	ARUE_RS02565
ARUE_RS02670	PF13416	Bacterial extracellular solute-binding protein
ARUE_RS02745	PF02028	BCCT family transporter
ARUE_RS02860	PF14742	ARUE_RS02860
ARUE_RS02885	PF16113	ARUE_RS02885
ARUE_RS02890	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
ARUE_RS02890	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
ARUE_RS02985	PF00174	Oxidoreductase molybdopterin binding domain
ARUE_RS03005	PF00356	Bacterial regulatory proteins, lacI family
ARUE_RS03075	PF02653	ARUE_RS03075
ARUE_RS03125	PF00675	Insulinase (Peptidase family M16)
ARUE_RS03240	PF13738	Pyridine nucleotide-disulphide oxidoreductase
ARUE_RS03475	PF00795	Carbon-nitrogen hydrolase
ARUE_RS03710	PF12169	DNA polymerase III subunits gamma and tau domain III
ARUE_RS03760	PF01551	Peptidase family M23
ARUE_RS03915	PF00989	PAS fold
ARUE_RS03915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ARUE_RS03915	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
ARUE_RS03970	PF01274	Malate synthase
ARUE_RS04220	PF08494	ARUE_RS04220
ARUE_RS04310	PF00282	Pyridoxal-dependent decarboxylase conserved domain
ARUE_RS04325	PF00512	His Kinase A (phospho-acceptor) domain
ARUE_RS04325	PF00672	HAMP domain
ARUE_RS04620	PF02780	Transketolase, C-terminal domain
ARUE_RS04870	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
ARUE_RS05040	PF00356	Bacterial regulatory proteins, lacI family
ARUE_RS05040	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
ARUE_RS05095	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ARUE_RS05190	PF01546	Peptidase family M20/M25/M40
ARUE_RS05190	PF07687	Peptidase dimerisation domain
ARUE_RS05295	PF00118	TCP-1/cpn60 chaperonin family
ARUE_RS05565	PF00474	Sodium:solute symporter family
ARUE_RS05655	PF17128	ARUE_RS05655
ARUE_RS05860	PF09371	Tex-like protein N-terminal domain
ARUE_RS06020	PF13185	GAF domain
ARUE_RS06035	PF00107	Zinc-binding dehydrogenase
ARUE_RS06035	PF08240	Alcohol dehydrogenase GroES-like domain
ARUE_RS06055	PF04851	Type III restriction enzyme, res subunit
ARUE_RS06055	PF13091	PLD-like domain
ARUE_RS06065	PF00271	Helicase conserved C-terminal domain
ARUE_RS06065	PF11907	ARUE_RS06065
ARUE_RS06135	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
ARUE_RS06280	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
ARUE_RS06340	PF07905	ARUE_RS06340
ARUE_RS06520	PF00113	Enolase, C-terminal TIM barrel domain
ARUE_RS06520	PF03952	Enolase, N-terminal domain
ARUE_RS06535	PF04417	ARUE_RS06535
ARUE_RS06760	PF00171	Aldehyde dehydrogenase family
ARUE_RS06975	PF00817	impB/mucB/samB family
ARUE_RS07190	PF00041	Fibronectin type III domain
ARUE_RS07390	PF13377	Periplasmic binding protein-like domain
ARUE_RS07420	PF00155	Aminotransferase class I and II
ARUE_RS07660	PF00318	Ribosomal protein S2
ARUE_RS07860	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
ARUE_RS07860	PF03129	Anticodon binding domain
ARUE_RS07910	PF01509	TruB family pseudouridylate synthase (N terminal domain)
ARUE_RS07910	PF16198	ARUE_RS07910
ARUE_RS07965	PF00512	His Kinase A (phospho-acceptor) domain
ARUE_RS07985	PF03453	MoeA N-terminal region (domain I and II)
ARUE_RS08070	PF01926	50S ribosome-binding GTPase
ARUE_RS08075	PF00270	DEAD/DEAH box helicase
ARUE_RS08235	PF01316	Arginine repressor, DNA binding domain
ARUE_RS08265	PF06029	AlkA N-terminal domain
ARUE_RS08265	PF12833	Helix-turn-helix domain
ARUE_RS08650	PF00091	Tubulin/FtsZ family, GTPase domain
ARUE_RS08650	PF12327	FtsZ family, C-terminal domain
ARUE_RS08895	PF00664	ABC transporter transmembrane region
ARUE_RS08905	PF00005	ABC transporter
ARUE_RS09030	PF02779	Transketolase, pyrimidine binding domain
ARUE_RS09030	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
ARUE_RS09125	PF01189	NOL1/NOP2/sun family
ARUE_RS09240	PF00931	NB-ARC domain
ARUE_RS09240	PF13424	Tetratricopeptide repeat
ARUE_RS09335	PF01261	Xylose isomerase-like TIM barrel
ARUE_RS09475	PF00202	Aminotransferase class-III
ARUE_RS09640	PF00067	Cytochrome P450
ARUE_RS09645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ARUE_RS09645	PF14759	Reductase C-terminal
ARUE_RS09675	PF08240	Alcohol dehydrogenase GroES-like domain
ARUE_RS09750	PF01915	Glycosyl hydrolase family 3 C-terminal domain
ARUE_RS10390	PF00528	Binding-protein-dependent transport system inner membrane component
ARUE_RS10440	PF00248	Aldo/keto reductase family
ARUE_RS10455	PF00199	Catalase
ARUE_RS10500	PF13556	PucR C-terminal helix-turn-helix domain
ARUE_RS10645	PF00534	Glycosyl transferases group 1
ARUE_RS10645	PF06925	ARUE_RS10645
ARUE_RS10825	PF00106	short chain dehydrogenase
ARUE_RS10895	PF07992	Pyridine nucleotide-disulphide oxidoreductase
ARUE_RS10950	PF00528	Binding-protein-dependent transport system inner membrane component
ARUE_RS11015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
ARUE_RS11015	PF03466	LysR substrate binding domain
ARUE_RS11105	PF00005	ABC transporter
ARUE_RS11180	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
ARUE_RS11225	PF02653	ARUE_RS11225
ARUE_RS11330	PF00205	Thiamine pyrophosphate enzyme, central domain
ARUE_RS11490	PF00271	Helicase conserved C-terminal domain
ARUE_RS11490	PF04408	Helicase associated domain (HA2)
ARUE_RS11700	PF00005	ABC transporter
ARUE_RS11770	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
ARUE_RS11770	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
ARUE_RS11935	PF11838	ERAP1-like C-terminal domain
ARUE_RS11995	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
ARUE_RS12280	PF02797	Chalcone and stilbene synthases, C-terminal domain
ARUE_RS12360	PF01546	Peptidase family M20/M25/M40
ARUE_RS12360	PF07687	Peptidase dimerisation domain
ARUE_RS12415	PF05649	Peptidase family M13
ARUE_RS12625	PF02773	S-adenosylmethionine synthetase, C-terminal domain
ARUE_RS12650	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
ARUE_RS12665	PF13367	ARUE_RS12665
ARUE_RS12855	PF09587	Bacterial capsule synthesis protein PGA_cap
ARUE_RS13090	PF05762	VWA domain containing CoxE-like protein
ARUE_RS13170	PF10150	Ribonuclease E/G family
ARUE_RS13205	PF00133	tRNA synthetases class I (I, L, M and V)
ARUE_RS13225	PF00133	tRNA synthetases class I (I, L, M and V)
ARUE_RS13375	PF00291	Pyridoxal-phosphate dependent enzyme
ARUE_RS13585	PF00448	SRP54-type protein, GTPase domain
ARUE_RS13585	PF02881	SRP54-type protein, helical bundle domain
ARUE_RS13590	PF02463	RecF/RecN/SMC N terminal domain
ARUE_RS13605	PF06470	SMC proteins Flexible Hinge Domain
ARUE_RS13655	PF07690	Major Facilitator Superfamily
ARUE_RS14065	PF00884	Sulfatase
ARUE_RS14070	PF00005	ABC transporter
ARUE_RS14160	PF01177	Asp/Glu/Hydantoin racemase
ARUE_RS14175	PF00271	Helicase conserved C-terminal domain
ARUE_RS14230	PF01694	Rhomboid family
ARUE_RS14370	PF04408	Helicase associated domain (HA2)
ARUE_RS14380	PF11898	ARUE_RS14380
ARUE_RS14665	PF01580	FtsK/SpoIIIE family
ARUE_RS14695	PF05088	ARUE_RS14695
ARUE_RS14700	PF05088	ARUE_RS14700
ARUE_RS14825	PF00005	ABC transporter
ARUE_RS14845	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
ARUE_RS14970	PF03699	ARUE_RS14970
ARUE_RS14990	PF05362	Lon protease (S16) C-terminal proteolytic domain
ARUE_RS15005	PF10103	Uncharacterised conserved protein (DUF2342)
ARUE_RS15020	PF00570	HRDC domain
ARUE_RS15020	PF13361	UvrD-like helicase C-terminal domain
ARUE_RS15055	PF13361	UvrD-like helicase C-terminal domain
ARUE_RS15285	PF00155	Aminotransferase class I and II
ARUE_RS15350	PF06071	Protein of unknown function (DUF933)
ARUE_RS15415	PF00005	ABC transporter
ARUE_RS15455	PF01301	Glycosyl hydrolases family 35
ARUE_RS15585	PF00117	Glutamine amidotransferase class-I
ARUE_RS15585	PF02540	NAD synthase
ARUE_RS15825	PF00128	Alpha amylase, catalytic domain
ARUE_RS16020	PF03947	Ribosomal Proteins L2, C-terminal domain
ARUE_RS16100	PF00562	RNA polymerase Rpb2, domain 6
ARUE_RS16100	PF04565	RNA polymerase Rpb2, domain 3
ARUE_RS16100	PF10385	RNA polymerase beta subunit external 1 domain
ARUE_RS16215	PF00583	Acetyltransferase (GNAT) family
ARUE_RS16515	PF00199	Catalase
ARUE_RS16525	PF09365	ARUE_RS16525
ARUE_RS16685	PF01507	Phosphoadenosine phosphosulfate reductase family
ARUE_RS16700	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
ARUE_RS16720	PF13930	DNA/RNA non-specific endonuclease
ARUE_RS16845	PF00395	S-layer homology domain
ARUE_RS16910	PF00395	S-layer homology domain
ARUE_RS16910	PF13620	Carboxypeptidase regulatory-like domain
ARUE_RS17000	PF00364	Biotin-requiring enzyme
ARUE_RS17040	PF04230	ARUE_RS17040
ARUE_RS17365	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
ARUE_RS17435	PF00171	Aldehyde dehydrogenase family
ARUE_RS17790	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ARUE_RS17825	PF02541	Ppx/GppA phosphatase family
ARUE_RS18250	PF00860	Permease family
ARUE_RS18630	PF00465	Iron-containing alcohol dehydrogenase
ARUE_RS19130	PF00083	Sugar (and other) transporter
ARUE_RS19205	PF00480	ROK family
ARUE_RS19285	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ARUE_RS19480	PF00221	Aromatic amino acid lyase
ARUE_RS20420	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
ARUE_RS20705	PF00005	ABC transporter
ARUE_RS20875	PF00155	Aminotransferase class I and II
ARUE_RS20965	PF10022	ARUE_RS20965
ARUE_RS21115	PF00107	Zinc-binding dehydrogenase
ARUE_RS21345	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
ARUE_RS21400	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
ARUE_RS21400	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
ARUE_RS21515	PF02803	Thiolase, C-terminal domain
ARUE_RS21570	PF13517	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
ARUE_RS21755	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ARUE_RS21850	PF00501	AMP-binding enzyme
ARUE_RS22095	PF13337	ARUE_RS22095
ARUE_RS22180	PF00437	Type II/IV secretion system protein
ARUE_RS22320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ARUE_RS22325	PF00204	DNA gyrase B
ARUE_RS22325	PF01751	Toprim domain
ARUE_RS22595	PF12146	Putative lysophospholipase
ARUE_RS22670	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
ARUE_RS22790	PF00665	Integrase core domain
ARUE_RS22800	PF03992	Antibiotic biosynthesis monooxygenase
ARUE_RS22810	PF02625	XdhC and CoxI family
ARUE_RS22810	PF13478	XdhC Rossmann domain
ARUE_RS22815	PF00111	2Fe-2S iron-sulfur cluster binding domain
ARUE_RS22815	PF01799	[2Fe-2S] binding domain
ARUE_RS22820	PF00941	FAD binding domain in molybdopterin dehydrogenase
ARUE_RS22820	PF03450	CO dehydrogenase flavoprotein C-terminal domain
ARUE_RS22825	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ARUE_RS22825	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
ARUE_RS22830	PF01494	FAD binding domain
ARUE_RS22835	PF00561	alpha/beta hydrolase fold
ARUE_RS22840	PF07859	alpha/beta hydrolase fold
ARUE_RS22845	PF07690	Major Facilitator Superfamily
ARUE_RS22850	PF12804	MobA-like NTP transferase domain
ARUE_RS22855	PF02597	ThiS family
ARUE_RS22860	PF04055	Radical SAM superfamily
ARUE_RS22860	PF06463	Molybdenum Cofactor Synthesis C
ARUE_RS22860	PF13394	4Fe-4S single cluster domain
ARUE_RS22865	PF02391	MoaE protein
ARUE_RS22870	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
ARUE_RS22870	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
ARUE_RS22875	PF00406	Adenylate kinase
ARUE_RS22880	PF07848	PaaX-like protein
ARUE_RS22880	PF08223	PaaX-like protein C-terminal domain
ARUE_RS22885	PF01042	Endoribonuclease L-PSP
ARUE_RS22890	PF01557	Fumarylacetoacetate (FAA) hydrolase family
ARUE_RS22895	PF07883	Cupin domain
ARUE_RS22900	PF13622	Thioesterase-like superfamily
ARUE_RS22905	PF00501	AMP-binding enzyme
ARUE_RS22905	PF13193	AMP-binding enzyme C-terminal domain
ARUE_RS22910	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
ARUE_RS22910	PF01494	FAD binding domain
ARUE_RS22915	PF07848	PaaX-like protein
ARUE_RS22915	PF08223	PaaX-like protein C-terminal domain
ARUE_RS22925	PF13676	TIR domain
ARUE_RS22940	PF12083	ARUE_RS22940
ARUE_RS22995	PF00436	Single-strand binding protein family
ARUE_RS23010	PF07510	ARUE_RS23010
ARUE_RS23045	PF00717	Peptidase S24-like
ARUE_RS23050	PF00817	impB/mucB/samB family
ARUE_RS23050	PF11799	impB/mucB/samB family C-terminal domain
ARUE_RS23050	PF13438	ARUE_RS23050
ARUE_RS23065	PF13384	Homeodomain-like domain
ARUE_RS23085	PF00462	Glutaredoxin
ARUE_RS23115	PF01580	FtsK/SpoIIIE family
ARUE_RS23145	PF12846	AAA-like domain
ARUE_RS23175	PF13337	ARUE_RS23175
ARUE_RS23175	PF16565	ARUE_RS23175
ARUE_RS23180	PF08665	ARUE_RS23180
ARUE_RS23195	PF08747	Domain of unknown function (DUF1788)
ARUE_RS23200	PF08849	Putative inner membrane protein (DUF1819)
ARUE_RS23205	PF12728	Helix-turn-helix domain
ARUE_RS23210	PF13614	AAA domain
ARUE_RS23220	PF08666	SAF domain
ARUE_RS23230	PF00437	Type II/IV secretion system protein
ARUE_RS23235	PF00482	Type II secretion system (T2SS), protein F
ARUE_RS23250	PF07811	ARUE_RS23250
ARUE_RS23255	PF07811	ARUE_RS23255
ARUE_RS23260	PF13400	ARUE_RS23260
ARUE_RS23280	PF01478	Type IV leader peptidase family
ARUE_RS23325	PF01381	Helix-turn-helix
ARUE_RS23370	PF00885	6,7-dimethyl-8-ribityllumazine synthase
ARUE_RS23415	PF10712	ARUE_RS23415
ARUE_RS23440	PF00171	Aldehyde dehydrogenase family
ARUE_RS23510	PF06414	Zeta toxin
ARUE_RS23515	PF00877	NlpC/P60 family
ARUE_RS23515	PF01551	Peptidase family M23
ARUE_RS23520	PF12642	Conjugative transposon protein TcpC