locus-tag class description ATC04_RS00100 PF02796 Helix-turn-helix domain of resolvase ATC04_RS00100 PF00239 Resolvase, N terminal domain ATC04_RS00110 PF12833 Helix-turn-helix domain ATC04_RS00110 PF01965 DJ-1/PfpI family ATC04_RS00130 PF07724 AAA domain (Cdc48 subfamily) ATC04_RS00130 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS00130 PF17871 AAA lid domain ATC04_RS00130 PF10431 C-terminal, D2-small domain, of ClpB protein ATC04_RS00130 PF02861 Clp amino terminal domain, pathogenicity island component ATC04_RS00135 PF11774 Lsr2 ATC04_RS00140 PF01336 OB-fold nucleic acid binding domain ATC04_RS00140 PF00152 tRNA synthetases class II (D, K and N) ATC04_RS00145 PF05649 Peptidase family M13 ATC04_RS00145 PF01431 Peptidase family M13 ATC04_RS00150 PF00106 short chain dehydrogenase ATC04_RS00175 PF01381 Helix-turn-helix ATC04_RS00200 PF02569 Pantoate-beta-alanine ligase ATC04_RS00225 PF02152 Dihydroneopterin aldolase ATC04_RS00230 PF00809 Pterin binding enzyme ATC04_RS00235 PF01227 GTP cyclohydrolase I ATC04_RS00240 PF17862 AAA+ lid domain ATC04_RS00240 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS00240 PF01434 Peptidase family M41 ATC04_RS00245 PF00156 Phosphoribosyl transferase domain ATC04_RS00250 PF09179 TilS substrate binding domain ATC04_RS00250 PF01171 PP-loop family ATC04_RS00260 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ATC04_RS00265 PF00719 Inorganic pyrophosphatase ATC04_RS00275 PF02646 RmuC family ATC04_RS00280 PF01470 Pyroglutamyl peptidase ATC04_RS00310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATC04_RS00310 PF02403 Seryl-tRNA synthetase N-terminal domain ATC04_RS00315 PF00781 Diacylglycerol kinase catalytic domain ATC04_RS00320 PF00800 Prephenate dehydratase ATC04_RS00320 PF01842 ACT domain ATC04_RS00330 PF01425 Amidase ATC04_RS00335 PF00854 POT family ATC04_RS00340 PF13443 Cro/C1-type HTH DNA-binding domain ATC04_RS00355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATC04_RS00355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATC04_RS00355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATC04_RS00355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATC04_RS00360 PF00324 Amino acid permease ATC04_RS00365 PF00171 Aldehyde dehydrogenase family ATC04_RS00380 PF02110 Hydroxyethylthiazole kinase family ATC04_RS00385 PF02581 Thiamine monophosphate synthase ATC04_RS00390 PF02581 Thiamine monophosphate synthase ATC04_RS00390 PF03070 TENA/THI-4/PQQC family ATC04_RS00390 PF08543 Phosphomethylpyrimidine kinase ATC04_RS00395 PF00860 Permease family ATC04_RS00400 PF00083 Sugar (and other) transporter ATC04_RS00410 PF00890 FAD binding domain ATC04_RS00415 PF00083 Sugar (and other) transporter ATC04_RS00415 PF07690 Major Facilitator Superfamily ATC04_RS00425 PF00890 FAD binding domain ATC04_RS00430 PF09339 IclR helix-turn-helix domain ATC04_RS00430 PF01614 Bacterial transcriptional regulator ATC04_RS00440 PF03633 Glycosyl hydrolase family 65, C-terminal domain ATC04_RS00440 PF03636 Glycosyl hydrolase family 65, N-terminal domain ATC04_RS00440 PF03632 Glycosyl hydrolase family 65 central catalytic domain ATC04_RS00460 PF00294 pfkB family carbohydrate kinase ATC04_RS00470 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS00485 PF01738 Dienelactone hydrolase family ATC04_RS00490 PF01156 Inosine-uridine preferring nucleoside hydrolase ATC04_RS00495 PF00356 Bacterial regulatory proteins, lacI family ATC04_RS00520 PF16697 Inner membrane component of T3SS, cytoplasmic domain ATC04_RS00530 PF01098 Cell cycle protein ATC04_RS00535 PF00905 Penicillin binding protein transpeptidase domain ATC04_RS00540 PF00069 Protein kinase domain ATC04_RS00545 PF00069 Protein kinase domain ATC04_RS00545 PF03793 PASTA domain ATC04_RS00550 PF00117 Glutamine amidotransferase class-I ATC04_RS00555 PF04203 Sortase domain ATC04_RS00560 PF06781 Cell division protein CrgA ATC04_RS00565 PF00893 Small Multidrug Resistance protein ATC04_RS00570 PF03466 LysR substrate binding domain ATC04_RS00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS00575 PF01810 LysE type translocator ATC04_RS00580 PF01694 Rhomboid family ATC04_RS00585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATC04_RS00600 PF01758 Sodium Bile acid symporter family ATC04_RS00605 PF13439 Glycosyltransferase Family 4 ATC04_RS00605 PF00534 Glycosyl transferases group 1 ATC04_RS00620 PF12089 Transmembrane domain of unknown function (DUF3566) ATC04_RS00625 PF03989 DNA gyrase C-terminal domain, beta-propeller ATC04_RS00625 PF00521 DNA gyrase/topoisomerase IV, subunit A ATC04_RS00630 PF00986 DNA gyrase B subunit, carboxyl terminus ATC04_RS00630 PF00204 DNA gyrase B ATC04_RS00630 PF01751 Toprim domain ATC04_RS00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS00635 PF05258 Dna[CI] antecedent, DciA ATC04_RS00640 PF02463 RecF/RecN/SMC N terminal domain ATC04_RS00645 PF02767 DNA polymerase III beta subunit, central domain ATC04_RS00645 PF02768 DNA polymerase III beta subunit, C-terminal domain ATC04_RS00645 PF00712 DNA polymerase III beta subunit, N-terminal domain ATC04_RS00650 PF00308 Bacterial dnaA protein ATC04_RS00650 PF08299 Bacterial dnaA protein helix-turn-helix ATC04_RS00660 PF01809 Putative membrane protein insertion efficiency factor ATC04_RS00665 PF02096 60Kd inner membrane protein ATC04_RS00675 PF02527 rRNA small subunit methyltransferase G ATC04_RS00680 PF13614 AAA domain ATC04_RS00685 PF17762 HTH domain found in ParB protein ATC04_RS00685 PF02195 ParB-like nuclease domain ATC04_RS00690 PF00085 Thioredoxin ATC04_RS00695 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS00710 PF00293 NUDIX domain ATC04_RS00715 PF01743 Poly A polymerase head domain ATC04_RS00715 PF12627 Probable RNA and SrmB- binding site of polymerase A ATC04_RS00715 PF01966 HD domain ATC04_RS00720 PF01658 Myo-inositol-1-phosphate synthase ATC04_RS00740 PF00535 Glycosyl transferase family 2 ATC04_RS00740 PF01501 Glycosyl transferase family 8 ATC04_RS00745 PF03102 NeuB family ATC04_RS00745 PF08666 SAF domain ATC04_RS00750 PF02348 Cytidylyltransferase ATC04_RS00770 PF00005 ABC transporter ATC04_RS00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS00780 PF07730 Histidine kinase ATC04_RS00785 PF00072 Response regulator receiver domain ATC04_RS00785 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS00795 PF02127 Aminopeptidase I zinc metalloprotease (M18) ATC04_RS00810 PF01266 FAD dependent oxidoreductase ATC04_RS00815 PF01757 Acyltransferase family ATC04_RS00820 PF01250 Ribosomal protein S6 ATC04_RS00825 PF00436 Single-strand binding protein family ATC04_RS00830 PF01084 Ribosomal protein S18 ATC04_RS00835 PF03948 Ribosomal protein L9, C-terminal domain ATC04_RS00835 PF01281 Ribosomal protein L9, N-terminal domain ATC04_RS00840 PF08543 Phosphomethylpyrimidine kinase ATC04_RS00870 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ATC04_RS00870 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ATC04_RS00875 PF07995 Glucose / Sorbosone dehydrogenase ATC04_RS00885 PF00501 AMP-binding enzyme ATC04_RS00885 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS00890 PF13426 PAS domain ATC04_RS00890 PF00158 Sigma-54 interaction domain ATC04_RS00890 PF02954 Bacterial regulatory protein, Fis family ATC04_RS00920 PF01381 Helix-turn-helix ATC04_RS00925 PF01613 Flavin reductase like domain ATC04_RS00930 PF03796 DnaB-like helicase C terminal domain ATC04_RS00930 PF00772 DnaB-like helicase N terminal domain ATC04_RS00940 PF07690 Major Facilitator Superfamily ATC04_RS00955 PF05726 Pirin C-terminal cupin domain ATC04_RS00955 PF02678 Pirin ATC04_RS00960 PF01047 MarR family ATC04_RS01010 PF00576 HIUase/Transthyretin family ATC04_RS01015 PF01014 Uricase ATC04_RS01020 PF00860 Permease family ATC04_RS01025 PF00356 Bacterial regulatory proteins, lacI family ATC04_RS01035 PF00596 Class II Aldolase and Adducin N-terminal domain ATC04_RS01040 PF11762 L-arabinose isomerase C-terminal domain ATC04_RS01040 PF02610 L-arabinose isomerase ATC04_RS01045 PF13407 Periplasmic binding protein domain ATC04_RS01050 PF00005 ABC transporter ATC04_RS01055 PF02653 Branched-chain amino acid transport system / permease component ATC04_RS01060 PF01263 Aldose 1-epimerase ATC04_RS01065 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ATC04_RS01065 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ATC04_RS01070 PF10509 Galactokinase galactose-binding signature ATC04_RS01070 PF08544 GHMP kinases C terminal ATC04_RS01070 PF00288 GHMP kinases N terminal domain ATC04_RS01075 PF01370 NAD dependent epimerase/dehydratase family ATC04_RS01095 PF00324 Amino acid permease ATC04_RS01100 PF00795 Carbon-nitrogen hydrolase ATC04_RS01110 PF02805 Metal binding domain of Ada ATC04_RS01110 PF00730 HhH-GPD superfamily base excision DNA repair protein ATC04_RS01110 PF12833 Helix-turn-helix domain ATC04_RS01110 PF06029 AlkA N-terminal domain ATC04_RS01115 PF00106 short chain dehydrogenase ATC04_RS01130 PF07690 Major Facilitator Superfamily ATC04_RS01135 PF00324 Amino acid permease ATC04_RS01145 PF00480 ROK family ATC04_RS01150 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS01150 PF16859 Tetracyclin repressor-like, C-terminal domain ATC04_RS01160 PF00664 ABC transporter transmembrane region ATC04_RS01160 PF00005 ABC transporter ATC04_RS01165 PF00890 FAD binding domain ATC04_RS01175 PF01614 Bacterial transcriptional regulator ATC04_RS01175 PF09339 IclR helix-turn-helix domain ATC04_RS01180 PF00390 Malic enzyme, N-terminal domain ATC04_RS01180 PF03949 Malic enzyme, NAD binding domain ATC04_RS01185 PF01274 Malate synthase ATC04_RS01195 PF07883 Cupin domain ATC04_RS01195 PF05899 Protein of unknown function (DUF861) ATC04_RS01210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATC04_RS01220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01225 PF12697 Alpha/beta hydrolase family ATC04_RS01230 PF00970 Oxidoreductase FAD-binding domain ATC04_RS01230 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS01230 PF00175 Oxidoreductase NAD-binding domain ATC04_RS01245 PF00355 Rieske [2Fe-2S] domain ATC04_RS01250 PF00890 FAD binding domain ATC04_RS01255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS01255 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS01255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS01260 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS01260 PF00501 AMP-binding enzyme ATC04_RS01270 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATC04_RS01275 PF01758 Sodium Bile acid symporter family ATC04_RS01280 PF01022 Bacterial regulatory protein, arsR family ATC04_RS01290 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS01290 PF17932 Tetracyclin repressor-like, C-terminal domain ATC04_RS01295 PF00561 alpha/beta hydrolase fold ATC04_RS01300 PF04303 PrpF protein ATC04_RS01305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATC04_RS01315 PF00355 Rieske [2Fe-2S] domain ATC04_RS01325 PF07690 Major Facilitator Superfamily ATC04_RS01330 PF07690 Major Facilitator Superfamily ATC04_RS01335 PF02803 Thiolase, C-terminal domain ATC04_RS01335 PF00108 Thiolase, N-terminal domain ATC04_RS01360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATC04_RS01365 PF07690 Major Facilitator Superfamily ATC04_RS01385 PF02653 Branched-chain amino acid transport system / permease component ATC04_RS01390 PF00005 ABC transporter ATC04_RS01390 PF12399 Branched-chain amino acid ATP-binding cassette transporter ATC04_RS01395 PF00005 ABC transporter ATC04_RS01405 PF00108 Thiolase, N-terminal domain ATC04_RS01405 PF02803 Thiolase, C-terminal domain ATC04_RS01415 PF01144 Coenzyme A transferase ATC04_RS01430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS01430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01435 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS01435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS01435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS01440 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS01445 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS01450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01450 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS01450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS01460 PF02803 Thiolase, C-terminal domain ATC04_RS01460 PF00108 Thiolase, N-terminal domain ATC04_RS01465 PF07690 Major Facilitator Superfamily ATC04_RS01480 PF03060 Nitronate monooxygenase ATC04_RS01490 PF01144 Coenzyme A transferase ATC04_RS01495 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS01510 PF01012 Electron transfer flavoprotein domain ATC04_RS01515 PF01012 Electron transfer flavoprotein domain ATC04_RS01515 PF00766 Electron transfer flavoprotein FAD-binding domain ATC04_RS01540 PF01613 Flavin reductase like domain ATC04_RS01545 PF00682 HMGL-like ATC04_RS01545 PF07836 DmpG-like communication domain ATC04_RS01550 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATC04_RS01550 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ATC04_RS01555 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS01560 PF09339 IclR helix-turn-helix domain ATC04_RS01560 PF01614 Bacterial transcriptional regulator ATC04_RS01565 PF07929 Plasmid pRiA4b ORF-3-like protein ATC04_RS01580 PF01012 Electron transfer flavoprotein domain ATC04_RS01580 PF00766 Electron transfer flavoprotein FAD-binding domain ATC04_RS01585 PF01012 Electron transfer flavoprotein domain ATC04_RS01590 PF07729 FCD domain ATC04_RS01590 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS01595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS01605 PF00005 ABC transporter ATC04_RS01605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS01610 PF00005 ABC transporter ATC04_RS01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS01615 PF00701 Dihydrodipicolinate synthetase family ATC04_RS01620 PF00480 ROK family ATC04_RS01625 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ATC04_RS01630 PF13088 BNR repeat-like domain ATC04_RS01630 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ATC04_RS01630 PF00754 F5/8 type C domain ATC04_RS01635 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS01635 PF07729 FCD domain ATC04_RS01640 PF00551 Formyl transferase ATC04_RS01645 PF01571 Aminomethyltransferase folate-binding domain ATC04_RS01645 PF16350 FAD dependent oxidoreductase central domain ATC04_RS01645 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATC04_RS01645 PF01266 FAD dependent oxidoreductase ATC04_RS01655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATC04_RS01655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATC04_RS01660 PF00970 Oxidoreductase FAD-binding domain ATC04_RS01660 PF00175 Oxidoreductase NAD-binding domain ATC04_RS01660 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS01665 PF00355 Rieske [2Fe-2S] domain ATC04_RS01665 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ATC04_RS01670 PF03466 LysR substrate binding domain ATC04_RS01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS01675 PF00107 Zinc-binding dehydrogenase ATC04_RS01675 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS01680 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS01685 PF09339 IclR helix-turn-helix domain ATC04_RS01685 PF01614 Bacterial transcriptional regulator ATC04_RS01690 PF00083 Sugar (and other) transporter ATC04_RS01690 PF08946 Osmosensory transporter coiled coil ATC04_RS01695 PF08946 Osmosensory transporter coiled coil ATC04_RS01695 PF00083 Sugar (and other) transporter ATC04_RS01700 PF01321 Creatinase/Prolidase N-terminal domain ATC04_RS01700 PF00557 Metallopeptidase family M24 ATC04_RS01705 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS01710 PF02633 Creatinine amidohydrolase ATC04_RS01720 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS01720 PF07729 FCD domain ATC04_RS01725 PF00464 Serine hydroxymethyltransferase ATC04_RS01730 PF01266 FAD dependent oxidoreductase ATC04_RS01735 PF04267 Sarcosine oxidase, delta subunit family ATC04_RS01740 PF01571 Aminomethyltransferase folate-binding domain ATC04_RS01740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS01740 PF17806 Sarcosine oxidase A3 domain ATC04_RS01740 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATC04_RS01745 PF04268 Sarcosine oxidase, gamma subunit family ATC04_RS01750 PF00551 Formyl transferase ATC04_RS01775 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS01775 PF00501 AMP-binding enzyme ATC04_RS01780 PF00535 Glycosyl transferase family 2 ATC04_RS01790 PF00990 Diguanylate cyclase, GGDEF domain ATC04_RS01790 PF01590 GAF domain ATC04_RS01790 PF00563 EAL domain ATC04_RS01790 PF00989 PAS fold ATC04_RS01795 PF00990 Diguanylate cyclase, GGDEF domain ATC04_RS01800 PF01740 STAS domain ATC04_RS01800 PF00916 Sulfate permease family ATC04_RS01815 PF02595 Glycerate kinase family ATC04_RS01820 PF00561 alpha/beta hydrolase fold ATC04_RS01825 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS01825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS01825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS01855 PF03328 HpcH/HpaI aldolase/citrate lyase family ATC04_RS01865 PF02785 Biotin carboxylase C-terminal domain ATC04_RS01865 PF00364 Biotin-requiring enzyme ATC04_RS01865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATC04_RS01865 PF00289 Biotin carboxylase, N-terminal domain ATC04_RS01870 PF01039 Carboxyl transferase domain ATC04_RS01890 PF00128 Alpha amylase, catalytic domain ATC04_RS01895 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS01900 PF14785 Maltose transport system permease protein MalF P2 domain ATC04_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS01915 PF07690 Major Facilitator Superfamily ATC04_RS01925 PF00005 ABC transporter ATC04_RS01930 PF01032 FecCD transport family ATC04_RS01935 PF01032 FecCD transport family ATC04_RS01940 PF01497 Periplasmic binding protein ATC04_RS01945 PF13302 Acetyltransferase (GNAT) domain ATC04_RS01965 PF00313 'Cold-shock' DNA-binding domain ATC04_RS01980 PF01177 Asp/Glu/Hydantoin racemase ATC04_RS01985 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ATC04_RS01990 PF01261 Xylose isomerase-like TIM barrel ATC04_RS01995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATC04_RS01995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATC04_RS02000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS02000 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS02000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS02005 PF01979 Amidohydrolase family ATC04_RS02015 PF03631 Virulence factor BrkB ATC04_RS02035 PF03601 Conserved hypothetical protein 698 ATC04_RS02050 PF00672 HAMP domain ATC04_RS02050 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS02055 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS02055 PF00072 Response regulator receiver domain ATC04_RS02065 PF01757 Acyltransferase family ATC04_RS02070 PF03992 Antibiotic biosynthesis monooxygenase ATC04_RS02075 PF01593 Flavin containing amine oxidoreductase ATC04_RS02080 PF01595 Cyclin M transmembrane N-terminal domain ATC04_RS02080 PF00571 CBS domain ATC04_RS02080 PF03471 Transporter associated domain ATC04_RS02085 PF01595 Cyclin M transmembrane N-terminal domain ATC04_RS02085 PF00571 CBS domain ATC04_RS02105 PF04960 Glutaminase ATC04_RS02110 PF00171 Aldehyde dehydrogenase family ATC04_RS02120 PF14759 Reductase C-terminal ATC04_RS02120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS02125 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS02135 PF00391 PEP-utilising enzyme, mobile domain ATC04_RS02135 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATC04_RS02140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATC04_RS02140 PF02896 PEP-utilising enzyme, TIM barrel domain ATC04_RS02140 PF00391 PEP-utilising enzyme, mobile domain ATC04_RS02145 PF00067 Cytochrome P450 ATC04_RS02150 PF09339 IclR helix-turn-helix domain ATC04_RS02150 PF01614 Bacterial transcriptional regulator ATC04_RS02170 PF00296 Luciferase-like monooxygenase ATC04_RS02175 PF01268 Formate--tetrahydrofolate ligase ATC04_RS02190 PF01156 Inosine-uridine preferring nucleoside hydrolase ATC04_RS02205 PF12558 ATP-binding cassette cobalt transporter ATC04_RS02205 PF00005 ABC transporter ATC04_RS02220 PF00872 Transposase, Mutator family ATC04_RS02230 PF13276 HTH-like domain ATC04_RS02230 PF00665 Integrase core domain ATC04_RS02230 PF13333 Integrase core domain ATC04_RS02235 PF01527 Transposase ATC04_RS02240 PF00665 Integrase core domain ATC04_RS02265 PF01527 Transposase ATC04_RS02280 PF02538 Hydantoinase B/oxoprolinase ATC04_RS02285 PF01968 Hydantoinase/oxoprolinase ATC04_RS02285 PF05378 Hydantoinase/oxoprolinase N-terminal region ATC04_RS02290 PF07905 Purine catabolism regulatory protein-like family ATC04_RS02290 PF13556 PucR C-terminal helix-turn-helix domain ATC04_RS02290 PF17853 GGDEF-like domain ATC04_RS02300 PF07690 Major Facilitator Superfamily ATC04_RS02300 PF00083 Sugar (and other) transporter ATC04_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS02305 PF03466 LysR substrate binding domain ATC04_RS02310 PF07969 Amidohydrolase family ATC04_RS02315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS02315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS02315 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS02320 PF00171 Aldehyde dehydrogenase family ATC04_RS02345 PF03441 FAD binding domain of DNA photolyase ATC04_RS02345 PF00875 DNA photolyase ATC04_RS02350 PF00578 AhpC/TSA family ATC04_RS02360 PF02585 GlcNAc-PI de-N-acetylase ATC04_RS02370 PF00171 Aldehyde dehydrogenase family ATC04_RS02380 PF01068 ATP dependent DNA ligase domain ATC04_RS02380 PF04679 ATP dependent DNA ligase C terminal region ATC04_RS02380 PF13298 DNA polymerase Ligase (LigD) ATC04_RS02385 PF02735 Ku70/Ku80 beta-barrel domain ATC04_RS02390 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS02390 PF00107 Zinc-binding dehydrogenase ATC04_RS02390 PF13823 Alcohol dehydrogenase GroES-associated ATC04_RS02415 PF00571 CBS domain ATC04_RS02425 PF00857 Isochorismatase family ATC04_RS02435 PF13520 Amino acid permease ATC04_RS02440 PF04239 Protein of unknown function (DUF421) ATC04_RS02450 PF01329 Pterin 4 alpha carbinolamine dehydratase ATC04_RS02460 PF01434 Peptidase family M41 ATC04_RS02460 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS02460 PF17862 AAA+ lid domain ATC04_RS02465 PF13784 Fic/DOC family N-terminal ATC04_RS02465 PF02661 Fic/DOC family ATC04_RS02475 PF01435 Peptidase family M48 ATC04_RS02480 PF03965 Penicillinase repressor ATC04_RS02495 PF00664 ABC transporter transmembrane region ATC04_RS02495 PF00005 ABC transporter ATC04_RS02500 PF00664 ABC transporter transmembrane region ATC04_RS02500 PF00005 ABC transporter ATC04_RS02505 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS02510 PF13607 Succinyl-CoA ligase like flavodoxin domain ATC04_RS02510 PF13380 CoA binding domain ATC04_RS02515 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS02515 PF17925 Tetracyclin repressor-like, C-terminal domain ATC04_RS02535 PF00171 Aldehyde dehydrogenase family ATC04_RS02540 PF07690 Major Facilitator Superfamily ATC04_RS02545 PF00011 Hsp20/alpha crystallin family ATC04_RS02570 PF01575 MaoC like domain ATC04_RS02580 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS02580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS02580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS02585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS02585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS02590 PF07690 Major Facilitator Superfamily ATC04_RS02595 PF00501 AMP-binding enzyme ATC04_RS02595 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS02600 PF13452 N-terminal half of MaoC dehydratase ATC04_RS02625 PF01012 Electron transfer flavoprotein domain ATC04_RS02630 PF01012 Electron transfer flavoprotein domain ATC04_RS02630 PF00766 Electron transfer flavoprotein FAD-binding domain ATC04_RS02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS02640 PF03466 LysR substrate binding domain ATC04_RS02655 PF00230 Major intrinsic protein ATC04_RS02660 PF00005 ABC transporter ATC04_RS02660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS02665 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS02665 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS02675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS02680 PF07690 Major Facilitator Superfamily ATC04_RS02685 PF02517 CPBP intramembrane metalloprotease ATC04_RS02690 PF07690 Major Facilitator Superfamily ATC04_RS02700 PF01554 MatE ATC04_RS02705 PF07729 FCD domain ATC04_RS02705 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS02710 PF07690 Major Facilitator Superfamily ATC04_RS02710 PF00083 Sugar (and other) transporter ATC04_RS02715 PF01070 FMN-dependent dehydrogenase ATC04_RS02730 PF13520 Amino acid permease ATC04_RS02735 PF03737 Aldolase/RraA ATC04_RS02755 PF01329 Pterin 4 alpha carbinolamine dehydratase ATC04_RS02760 PF13520 Amino acid permease ATC04_RS02765 PF01872 RibD C-terminal domain ATC04_RS02770 PF05199 GMC oxidoreductase ATC04_RS02770 PF00732 GMC oxidoreductase ATC04_RS02775 PF00324 Amino acid permease ATC04_RS02795 PF00403 Heavy-metal-associated domain ATC04_RS02805 PF02583 Metal-sensitive transcriptional repressor ATC04_RS02835 PF07690 Major Facilitator Superfamily ATC04_RS02860 PF01494 FAD binding domain ATC04_RS02860 PF07976 Phenol hydroxylase, C-terminal dimerisation domain ATC04_RS02875 PF05544 Proline racemase ATC04_RS02880 PF04012 PspA/IM30 family ATC04_RS02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS02900 PF07730 Histidine kinase ATC04_RS02900 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ATC04_RS02900 PF00672 HAMP domain ATC04_RS02925 PF03061 Thioesterase superfamily ATC04_RS02930 PF04960 Glutaminase ATC04_RS02970 PF00795 Carbon-nitrogen hydrolase ATC04_RS02975 PF04371 Porphyromonas-type peptidyl-arginine deiminase ATC04_RS02985 PF01266 FAD dependent oxidoreductase ATC04_RS03010 PF02797 Chalcone and stilbene synthases, C-terminal domain ATC04_RS03010 PF00195 Chalcone and stilbene synthases, N-terminal domain ATC04_RS03015 PF13649 Methyltransferase domain ATC04_RS03020 PF01494 FAD binding domain ATC04_RS03025 PF04055 Radical SAM superfamily ATC04_RS03040 PF02627 Carboxymuconolactone decarboxylase family ATC04_RS03045 PF00155 Aminotransferase class I and II ATC04_RS03055 PF00561 alpha/beta hydrolase fold ATC04_RS03060 PF01979 Amidohydrolase family ATC04_RS03065 PF05195 Aminopeptidase P, N-terminal domain ATC04_RS03065 PF00557 Metallopeptidase family M24 ATC04_RS03080 PF09335 SNARE associated Golgi protein ATC04_RS03085 PF00005 ABC transporter ATC04_RS03095 PF07730 Histidine kinase ATC04_RS03100 PF00072 Response regulator receiver domain ATC04_RS03100 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS03115 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS03115 PF00501 AMP-binding enzyme ATC04_RS03130 PF02634 FdhD/NarQ family ATC04_RS03135 PF01568 Molydopterin dinucleotide binding domain ATC04_RS03135 PF00384 Molybdopterin oxidoreductase ATC04_RS03140 PF00860 Permease family ATC04_RS03145 PF01799 [2Fe-2S] binding domain ATC04_RS03145 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS03150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ATC04_RS03150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ATC04_RS03160 PF02913 FAD linked oxidases, C-terminal domain ATC04_RS03160 PF01565 FAD binding domain ATC04_RS03165 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS03165 PF07729 FCD domain ATC04_RS03170 PF00248 Aldo/keto reductase family ATC04_RS03180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATC04_RS03180 PF14824 Sirohaem biosynthesis protein central ATC04_RS03180 PF10414 Sirohaem synthase dimerisation region ATC04_RS03185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATC04_RS03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS03185 PF18267 Rubredoxin NAD+ reductase C-terminal domain ATC04_RS03185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATC04_RS03185 PF04324 BFD-like [2Fe-2S] binding domain ATC04_RS03185 PF13806 Rieske-like [2Fe-2S] domain ATC04_RS03195 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS03195 PF14759 Reductase C-terminal ATC04_RS03200 PF01568 Molydopterin dinucleotide binding domain ATC04_RS03200 PF00384 Molybdopterin oxidoreductase ATC04_RS03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ATC04_RS03205 PF07690 Major Facilitator Superfamily ATC04_RS03215 PF08328 Adenylosuccinate lyase C-terminal ATC04_RS03215 PF00206 Lyase ATC04_RS03235 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ATC04_RS03240 PF00155 Aminotransferase class I and II ATC04_RS03245 PF00676 Dehydrogenase E1 component ATC04_RS03250 PF02780 Transketolase, C-terminal domain ATC04_RS03250 PF02779 Transketolase, pyrimidine binding domain ATC04_RS03255 PF02817 e3 binding domain ATC04_RS03255 PF00364 Biotin-requiring enzyme ATC04_RS03255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATC04_RS03260 PF07676 WD40-like Beta Propeller Repeat ATC04_RS03260 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ATC04_RS03260 PF00326 Prolyl oligopeptidase family ATC04_RS03265 PF00324 Amino acid permease ATC04_RS03270 PF00206 Lyase ATC04_RS03270 PF10415 Fumarase C C-terminus ATC04_RS03280 PF07729 FCD domain ATC04_RS03280 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS03295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS03295 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS03295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS03300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATC04_RS03300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATC04_RS03305 PF00149 Calcineurin-like phosphoesterase ATC04_RS03310 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS03320 PF00108 Thiolase, N-terminal domain ATC04_RS03320 PF02803 Thiolase, C-terminal domain ATC04_RS03325 PF01144 Coenzyme A transferase ATC04_RS03330 PF01144 Coenzyme A transferase ATC04_RS03340 PF09339 IclR helix-turn-helix domain ATC04_RS03340 PF01614 Bacterial transcriptional regulator ATC04_RS03345 PF14031 Putative serine dehydratase domain ATC04_RS03395 PF07690 Major Facilitator Superfamily ATC04_RS03410 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS03410 PF00501 AMP-binding enzyme ATC04_RS03425 PF00005 ABC transporter ATC04_RS03425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS03430 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS03440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS03450 PF01638 HxlR-like helix-turn-helix ATC04_RS03455 PF12706 Beta-lactamase superfamily domain ATC04_RS03460 PF07690 Major Facilitator Superfamily ATC04_RS03460 PF00083 Sugar (and other) transporter ATC04_RS03465 PF03466 LysR substrate binding domain ATC04_RS03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS03470 PF02656 Domain of unknown function (DUF202) ATC04_RS03475 PF02656 Domain of unknown function (DUF202) ATC04_RS03480 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS03480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS03480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS03495 PF03601 Conserved hypothetical protein 698 ATC04_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS03500 PF03466 LysR substrate binding domain ATC04_RS03505 PF00083 Sugar (and other) transporter ATC04_RS03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS03510 PF03466 LysR substrate binding domain ATC04_RS03515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATC04_RS03515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATC04_RS03525 PF07690 Major Facilitator Superfamily ATC04_RS03525 PF00083 Sugar (and other) transporter ATC04_RS03530 PF08501 Shikimate dehydrogenase substrate binding domain ATC04_RS03530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATC04_RS03535 PF01261 Xylose isomerase-like TIM barrel ATC04_RS03535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATC04_RS03540 PF09339 IclR helix-turn-helix domain ATC04_RS03540 PF01614 Bacterial transcriptional regulator ATC04_RS03545 PF03061 Thioesterase superfamily ATC04_RS03555 PF00155 Aminotransferase class I and II ATC04_RS03565 PF00390 Malic enzyme, N-terminal domain ATC04_RS03565 PF03949 Malic enzyme, NAD binding domain ATC04_RS03580 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS03585 PF00324 Amino acid permease ATC04_RS03590 PF03328 HpcH/HpaI aldolase/citrate lyase family ATC04_RS03595 PF01235 Sodium:alanine symporter family ATC04_RS03600 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS03610 PF00005 ABC transporter ATC04_RS03610 PF00571 CBS domain ATC04_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS03625 PF04264 YceI-like domain ATC04_RS03640 PF02589 LUD domain ATC04_RS03645 PF13183 4Fe-4S dicluster domain ATC04_RS03645 PF11870 Domain of unknown function (DUF3390) ATC04_RS03645 PF02589 LUD domain ATC04_RS03650 PF02754 Cysteine-rich domain ATC04_RS03655 PF02652 L-lactate permease ATC04_RS03660 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS03660 PF07702 UTRA domain ATC04_RS03670 PF00067 Cytochrome P450 ATC04_RS03680 PF00271 Helicase conserved C-terminal domain ATC04_RS03680 PF00176 SNF2 family N-terminal domain ATC04_RS03680 PF04434 SWIM zinc finger ATC04_RS03695 PF00355 Rieske [2Fe-2S] domain ATC04_RS03700 PF14759 Reductase C-terminal ATC04_RS03700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS03715 PF01037 Lrp/AsnC ligand binding domain ATC04_RS03725 PF02386 Cation transport protein ATC04_RS03730 PF02254 TrkA-N domain ATC04_RS03730 PF02080 TrkA-C domain ATC04_RS03755 PF01593 Flavin containing amine oxidoreductase ATC04_RS03770 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATC04_RS03790 PF07739 TipAS antibiotic-recognition domain ATC04_RS03790 PF13411 MerR HTH family regulatory protein ATC04_RS03815 PF01297 Zinc-uptake complex component A periplasmic ATC04_RS03820 PF00005 ABC transporter ATC04_RS03825 PF00950 ABC 3 transport family ATC04_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS03835 PF00005 ABC transporter ATC04_RS03850 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS03850 PF07702 UTRA domain ATC04_RS03855 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS03860 PF18357 Diphteria toxin repressor SH3 domain ATC04_RS03860 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATC04_RS03860 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATC04_RS03865 PF00294 pfkB family carbohydrate kinase ATC04_RS03885 PF02261 Aspartate decarboxylase ATC04_RS03890 PF00221 Aromatic amino acid lyase ATC04_RS03905 PF00210 Ferritin-like domain ATC04_RS03920 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS03925 PF13378 Enolase C-terminal domain-like ATC04_RS03925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ATC04_RS03935 PF00248 Aldo/keto reductase family ATC04_RS03945 PF00005 ABC transporter ATC04_RS03950 PF02653 Branched-chain amino acid transport system / permease component ATC04_RS03955 PF13407 Periplasmic binding protein domain ATC04_RS03960 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS03960 PF07729 FCD domain ATC04_RS03965 PF00294 pfkB family carbohydrate kinase ATC04_RS03970 PF13532 2OG-Fe(II) oxygenase superfamily ATC04_RS03980 PF07690 Major Facilitator Superfamily ATC04_RS04005 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS04005 PF00107 Zinc-binding dehydrogenase ATC04_RS04015 PF00082 Subtilase family ATC04_RS04015 PF05922 Peptidase inhibitor I9 ATC04_RS04020 PF13088 BNR repeat-like domain ATC04_RS04020 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ATC04_RS04020 PF00754 F5/8 type C domain ATC04_RS04025 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS04025 PF14759 Reductase C-terminal ATC04_RS04030 PF03576 Peptidase family S58 ATC04_RS04040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATC04_RS04040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS04050 PF13823 Alcohol dehydrogenase GroES-associated ATC04_RS04050 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS04050 PF00107 Zinc-binding dehydrogenase ATC04_RS04055 PF13350 Tyrosine phosphatase family ATC04_RS04065 PF00480 ROK family ATC04_RS04075 PF07687 Peptidase dimerisation domain ATC04_RS04075 PF01546 Peptidase family M20/M25/M40 ATC04_RS04095 PF01276 Orn/Lys/Arg decarboxylase, major domain ATC04_RS04095 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ATC04_RS04095 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ATC04_RS04100 PF00144 Beta-lactamase ATC04_RS04110 PF01370 NAD dependent epimerase/dehydratase family ATC04_RS04110 PF08338 Domain of unknown function (DUF1731) ATC04_RS04115 PF00474 Sodium:solute symporter family ATC04_RS04120 PF03466 LysR substrate binding domain ATC04_RS04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS04125 PF00171 Aldehyde dehydrogenase family ATC04_RS04135 PF00011 Hsp20/alpha crystallin family ATC04_RS04140 PF13411 MerR HTH family regulatory protein ATC04_RS04160 PF13732 Domain of unknown function (DUF4162) ATC04_RS04160 PF00005 ABC transporter ATC04_RS04165 PF00072 Response regulator receiver domain ATC04_RS04165 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS04170 PF07730 Histidine kinase ATC04_RS04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS04180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ATC04_RS04190 PF00005 ABC transporter ATC04_RS04190 PF00664 ABC transporter transmembrane region ATC04_RS04195 PF00664 ABC transporter transmembrane region ATC04_RS04195 PF00005 ABC transporter ATC04_RS04200 PF01645 Conserved region in glutamate synthase ATC04_RS04205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS04205 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS04205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS04210 PF03466 LysR substrate binding domain ATC04_RS04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS04235 PF00296 Luciferase-like monooxygenase ATC04_RS04240 PF00313 'Cold-shock' DNA-binding domain ATC04_RS04245 PF07690 Major Facilitator Superfamily ATC04_RS04260 PF03458 UPF0126 domain ATC04_RS04270 PF00326 Prolyl oligopeptidase family ATC04_RS04270 PF07676 WD40-like Beta Propeller Repeat ATC04_RS04285 PF16921 Tex protein YqgF-like domain ATC04_RS04285 PF17674 HHH domain ATC04_RS04285 PF00575 S1 RNA binding domain ATC04_RS04285 PF09371 Tex-like protein N-terminal domain ATC04_RS04290 PF00210 Ferritin-like domain ATC04_RS04300 PF00072 Response regulator receiver domain ATC04_RS04300 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS04325 PF00171 Aldehyde dehydrogenase family ATC04_RS04330 PF00248 Aldo/keto reductase family ATC04_RS04335 PF00561 alpha/beta hydrolase fold ATC04_RS04340 PF00271 Helicase conserved C-terminal domain ATC04_RS04340 PF00270 DEAD/DEAH box helicase ATC04_RS04340 PF08482 ATP-dependent helicase C-terminal ATC04_RS04340 PF04408 Helicase associated domain (HA2) ATC04_RS04345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS04345 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS04345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS04350 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS04350 PF17754 MftR C-terminal domain ATC04_RS04365 PF07690 Major Facilitator Superfamily ATC04_RS04370 PF02567 Phenazine biosynthesis-like protein ATC04_RS04395 PF00005 ABC transporter ATC04_RS04410 PF00753 Metallo-beta-lactamase superfamily ATC04_RS04410 PF16123 Hydroxyacylglutathione hydrolase C-terminus ATC04_RS04415 PF01032 FecCD transport family ATC04_RS04420 PF01032 FecCD transport family ATC04_RS04425 PF00005 ABC transporter ATC04_RS04435 PF00005 ABC transporter ATC04_RS04435 PF00664 ABC transporter transmembrane region ATC04_RS04450 PF13409 Glutathione S-transferase, N-terminal domain ATC04_RS04460 PF00075 RNase H ATC04_RS04465 PF13520 Amino acid permease ATC04_RS04480 PF02347 Glycine cleavage system P-protein ATC04_RS04485 PF08669 Glycine cleavage T-protein C-terminal barrel domain ATC04_RS04485 PF01571 Aminomethyltransferase folate-binding domain ATC04_RS04490 PF01597 Glycine cleavage H-protein ATC04_RS04495 PF00464 Serine hydroxymethyltransferase ATC04_RS04500 PF03313 Serine dehydratase alpha chain ATC04_RS04500 PF03315 Serine dehydratase beta chain ATC04_RS04505 PF00571 CBS domain ATC04_RS04505 PF03448 MgtE intracellular N domain ATC04_RS04505 PF01769 Divalent cation transporter ATC04_RS04510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ATC04_RS04540 PF00171 Aldehyde dehydrogenase family ATC04_RS04545 PF01266 FAD dependent oxidoreductase ATC04_RS04555 PF02728 Copper amine oxidase, N3 domain ATC04_RS04555 PF01179 Copper amine oxidase, enzyme domain ATC04_RS04560 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS04560 PF13977 BetI-type transcriptional repressor, C-terminal ATC04_RS04575 PF00171 Aldehyde dehydrogenase family ATC04_RS04590 PF01464 Transglycosylase SLT domain ATC04_RS04590 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATC04_RS04610 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATC04_RS04625 PF08501 Shikimate dehydrogenase substrate binding domain ATC04_RS04635 PF00202 Aminotransferase class-III ATC04_RS04640 PF00171 Aldehyde dehydrogenase family ATC04_RS04665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS04665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS04665 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS04675 PF00665 Integrase core domain ATC04_RS04680 PF00202 Aminotransferase class-III ATC04_RS04685 PF01037 Lrp/AsnC ligand binding domain ATC04_RS04700 PF00005 ABC transporter ATC04_RS04700 PF08402 TOBE domain ATC04_RS04705 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS04710 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS04720 PF00830 Ribosomal L28 family ATC04_RS04725 PF00471 Ribosomal protein L33 ATC04_RS04730 PF00253 Ribosomal protein S14p/S29e ATC04_RS04745 PF00216 Bacterial DNA-binding protein ATC04_RS04750 PF00216 Bacterial DNA-binding protein ATC04_RS04765 PF04314 Copper chaperone PCu(A)C ATC04_RS04775 PF05425 Copper resistance protein D ATC04_RS04775 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ATC04_RS04785 PF02683 Cytochrome C biogenesis protein transmembrane region ATC04_RS04785 PF17991 Thioredoxin like C-terminal domain ATC04_RS04785 PF00578 AhpC/TSA family ATC04_RS04790 PF07690 Major Facilitator Superfamily ATC04_RS04800 PF05872 Bacterial protein of unknown function (DUF853) ATC04_RS04805 PF00005 ABC transporter ATC04_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS04815 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATC04_RS04835 PF05681 Fumarate hydratase (Fumerase) ATC04_RS04835 PF05683 Fumarase C-terminus ATC04_RS04850 PF00692 dUTPase ATC04_RS04860 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ATC04_RS04860 PF13244 Domain of unknown function (DUF4040) ATC04_RS04860 PF00361 Proton-conducting membrane transporter ATC04_RS04860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ATC04_RS04865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ATC04_RS04870 PF00361 Proton-conducting membrane transporter ATC04_RS04875 PF01899 Na+/H+ ion antiporter subunit ATC04_RS04885 PF03334 Na+/H+ antiporter subunit ATC04_RS04895 PF09819 ABC-type cobalt transport system, permease component ATC04_RS04900 PF00005 ABC transporter ATC04_RS04910 PF13396 Phospholipase_D-nuclease N-terminal ATC04_RS04910 PF13091 PLD-like domain ATC04_RS04915 PF00561 alpha/beta hydrolase fold ATC04_RS04920 PF04715 Anthranilate synthase component I, N terminal region ATC04_RS04920 PF00117 Glutamine amidotransferase class-I ATC04_RS04920 PF00425 chorismate binding enzyme ATC04_RS04925 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATC04_RS04930 PF01810 LysE type translocator ATC04_RS04935 PF01047 MarR family ATC04_RS04940 PF03176 MMPL family ATC04_RS04945 PF12300 ATP-dependent RNA helicase RhlB ATC04_RS04945 PF00271 Helicase conserved C-terminal domain ATC04_RS04945 PF00270 DEAD/DEAH box helicase ATC04_RS04960 PF00012 Hsp70 protein ATC04_RS04965 PF01025 GrpE ATC04_RS04970 PF00684 DnaJ central domain ATC04_RS04970 PF01556 DnaJ C terminal domain ATC04_RS04970 PF00226 DnaJ domain ATC04_RS04975 PF13411 MerR HTH family regulatory protein ATC04_RS04985 PF02390 Putative methyltransferase ATC04_RS04990 PF03733 Inner membrane component domain ATC04_RS04995 PF03741 Integral membrane protein TerC family ATC04_RS05005 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS05005 PF10431 C-terminal, D2-small domain, of ClpB protein ATC04_RS05005 PF02861 Clp amino terminal domain, pathogenicity island component ATC04_RS05005 PF07724 AAA domain (Cdc48 subfamily) ATC04_RS05005 PF17871 AAA lid domain ATC04_RS05020 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS05020 PF00072 Response regulator receiver domain ATC04_RS05025 PF01548 Transposase ATC04_RS05025 PF02371 Transposase IS116/IS110/IS902 family ATC04_RS05030 PF02371 Transposase IS116/IS110/IS902 family ATC04_RS05030 PF01548 Transposase ATC04_RS05040 PF02769 AIR synthase related protein, C-terminal domain ATC04_RS05040 PF00586 AIR synthase related protein, N-terminal domain ATC04_RS05045 PF00156 Phosphoribosyl transferase domain ATC04_RS05065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATC04_RS05065 PF02843 Phosphoribosylglycinamide synthetase, C domain ATC04_RS05065 PF02844 Phosphoribosylglycinamide synthetase, N domain ATC04_RS05070 PF01259 SAICAR synthetase ATC04_RS05075 PF00664 ABC transporter transmembrane region ATC04_RS05075 PF00005 ABC transporter ATC04_RS05080 PF00005 ABC transporter ATC04_RS05080 PF00664 ABC transporter transmembrane region ATC04_RS05090 PF00905 Penicillin binding protein transpeptidase domain ATC04_RS05090 PF00912 Transglycosylase ATC04_RS05095 PF01042 Endoribonuclease L-PSP ATC04_RS05105 PF13545 Crp-like helix-turn-helix domain ATC04_RS05105 PF00027 Cyclic nucleotide-binding domain ATC04_RS05110 PF13180 PDZ domain ATC04_RS05115 PF01220 Dehydroquinase class II ATC04_RS05125 PF16177 Acetyl-coenzyme A synthetase N-terminus ATC04_RS05125 PF00501 AMP-binding enzyme ATC04_RS05125 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS05130 PF10576 Iron-sulfur binding domain of endonuclease III ATC04_RS05130 PF00633 Helix-hairpin-helix motif ATC04_RS05130 PF00730 HhH-GPD superfamily base excision DNA repair protein ATC04_RS05135 PF00293 NUDIX domain ATC04_RS05150 PF00437 Type II/IV secretion system protein ATC04_RS05180 PF00270 DEAD/DEAH box helicase ATC04_RS05180 PF00271 Helicase conserved C-terminal domain ATC04_RS05180 PF09369 Domain of unknown function (DUF1998) ATC04_RS05190 PF12368 Rhodanase C-terminal ATC04_RS05190 PF17773 UPF0176 acylphosphatase like domain ATC04_RS05210 PF13368 Topoisomerase C-terminal repeat ATC04_RS05210 PF01751 Toprim domain ATC04_RS05210 PF01131 DNA topoisomerase ATC04_RS05215 PF02541 Ppx/GppA phosphatase family ATC04_RS05220 PF01261 Xylose isomerase-like TIM barrel ATC04_RS05225 PF03807 NADP oxidoreductase coenzyme F420-dependent ATC04_RS05225 PF14748 Pyrroline-5-carboxylate reductase dimerisation ATC04_RS05230 PF01494 FAD binding domain ATC04_RS05235 PF02080 TrkA-C domain ATC04_RS05235 PF02254 TrkA-N domain ATC04_RS05240 PF02386 Cation transport protein ATC04_RS05245 PF00850 Histone deacetylase domain ATC04_RS05250 PF01022 Bacterial regulatory protein, arsR family ATC04_RS05255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ATC04_RS05255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ATC04_RS05260 PF12728 Helix-turn-helix domain ATC04_RS05275 PF06971 Putative DNA-binding protein N-terminus ATC04_RS05275 PF02629 CoA binding domain ATC04_RS05285 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS05290 PF00085 Thioredoxin ATC04_RS05295 PF02683 Cytochrome C biogenesis protein transmembrane region ATC04_RS05305 PF01578 Cytochrome C assembly protein ATC04_RS05320 PF01040 UbiA prenyltransferase family ATC04_RS05325 PF00501 AMP-binding enzyme ATC04_RS05325 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS05330 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS05335 PF00083 Sugar (and other) transporter ATC04_RS05335 PF08946 Osmosensory transporter coiled coil ATC04_RS05340 PF02803 Thiolase, C-terminal domain ATC04_RS05340 PF00108 Thiolase, N-terminal domain ATC04_RS05345 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS05350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS05350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS05360 PF01184 GPR1/FUN34/yaaH family ATC04_RS05370 PF13350 Tyrosine phosphatase family ATC04_RS05390 PF03061 Thioesterase superfamily ATC04_RS05395 PF01575 MaoC like domain ATC04_RS05395 PF00171 Aldehyde dehydrogenase family ATC04_RS05410 PF14535 AMP-binding enzyme C-terminal domain ATC04_RS05410 PF00501 AMP-binding enzyme ATC04_RS05415 PF03061 Thioesterase superfamily ATC04_RS05420 PF04229 GrpB protein ATC04_RS05425 PF00326 Prolyl oligopeptidase family ATC04_RS05425 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATC04_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS05435 PF00005 ABC transporter ATC04_RS05440 PF07681 DoxX ATC04_RS05445 PF05138 Phenylacetic acid catabolic protein ATC04_RS05450 PF06243 Phenylacetic acid degradation B ATC04_RS05455 PF05138 Phenylacetic acid catabolic protein ATC04_RS05460 PF01883 Iron-sulfur cluster assembly protein ATC04_RS05465 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS05465 PF00175 Oxidoreductase NAD-binding domain ATC04_RS05465 PF00970 Oxidoreductase FAD-binding domain ATC04_RS05470 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS05475 PF01037 Lrp/AsnC ligand binding domain ATC04_RS05480 PF00676 Dehydrogenase E1 component ATC04_RS05485 PF02780 Transketolase, C-terminal domain ATC04_RS05485 PF02779 Transketolase, pyrimidine binding domain ATC04_RS05490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATC04_RS05490 PF02817 e3 binding domain ATC04_RS05490 PF00364 Biotin-requiring enzyme ATC04_RS05505 PF13378 Enolase C-terminal domain-like ATC04_RS05505 PF18374 Enolase N-terminal domain-like ATC04_RS05515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS05520 PF00005 ABC transporter ATC04_RS05525 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS05535 PF00425 chorismate binding enzyme ATC04_RS05540 PF00348 Polyprenyl synthetase ATC04_RS05555 PF13556 PucR C-terminal helix-turn-helix domain ATC04_RS05555 PF07905 Purine catabolism regulatory protein-like family ATC04_RS05560 PF00209 Sodium:neurotransmitter symporter family ATC04_RS05565 PF00202 Aminotransferase class-III ATC04_RS05570 PF00892 EamA-like transporter family ATC04_RS05575 PF01435 Peptidase family M48 ATC04_RS05580 PF04461 Protein of unknown function (DUF520) ATC04_RS05590 PF00085 Thioredoxin ATC04_RS05600 PF00571 CBS domain ATC04_RS05600 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS05605 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS05615 PF03880 DbpA RNA binding domain ATC04_RS05615 PF00270 DEAD/DEAH box helicase ATC04_RS05615 PF00271 Helicase conserved C-terminal domain ATC04_RS05710 PF00772 DnaB-like helicase N terminal domain ATC04_RS05710 PF03796 DnaB-like helicase C terminal domain ATC04_RS05740 PF16473 3' exoribonuclease, RNase T-like ATC04_RS05810 PF01476 LysM domain ATC04_RS05810 PF08525 Opacity-associated protein A N-terminal motif ATC04_RS05810 PF01551 Peptidase family M23 ATC04_RS05835 PF12708 Pectate lyase superfamily protein ATC04_RS05835 PF13229 Right handed beta helix region ATC04_RS05835 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ATC04_RS05875 PF04607 Region found in RelA / SpoT proteins ATC04_RS05905 PF13452 N-terminal half of MaoC dehydratase ATC04_RS05915 PF07690 Major Facilitator Superfamily ATC04_RS05920 PF01565 FAD binding domain ATC04_RS05920 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ATC04_RS05925 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATC04_RS05925 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATC04_RS05935 PF00186 Dihydrofolate reductase ATC04_RS05940 PF00303 Thymidylate synthase ATC04_RS05950 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS05950 PF00293 NUDIX domain ATC04_RS05955 PF17941 Polyphosphate kinase C-terminal domain 1 ATC04_RS05955 PF13090 Polyphosphate kinase C-terminal domain 2 ATC04_RS05955 PF02503 Polyphosphate kinase middle domain ATC04_RS05955 PF13089 Polyphosphate kinase N-terminal domain ATC04_RS05960 PF00583 Acetyltransferase (GNAT) family ATC04_RS05965 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS05975 PF08768 Domain of unknown function (DUF1794) ATC04_RS05980 PF01571 Aminomethyltransferase folate-binding domain ATC04_RS05985 PF00365 Phosphofructokinase ATC04_RS06010 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS06010 PF00072 Response regulator receiver domain ATC04_RS06015 PF00155 Aminotransferase class I and II ATC04_RS06025 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ATC04_RS06030 PF02357 Transcription termination factor nusG ATC04_RS06035 PF00298 Ribosomal protein L11, RNA binding domain ATC04_RS06035 PF03946 Ribosomal protein L11, N-terminal domain ATC04_RS06040 PF00687 Ribosomal protein L1p/L10e family ATC04_RS06045 PF00466 Ribosomal protein L10 ATC04_RS06050 PF00542 Ribosomal protein L7/L12 C-terminal domain ATC04_RS06050 PF16320 Ribosomal protein L7/L12 dimerisation domain ATC04_RS06055 PF01757 Acyltransferase family ATC04_RS06065 PF04563 RNA polymerase beta subunit ATC04_RS06065 PF04560 RNA polymerase Rpb2, domain 7 ATC04_RS06065 PF00562 RNA polymerase Rpb2, domain 6 ATC04_RS06065 PF04561 RNA polymerase Rpb2, domain 2 ATC04_RS06065 PF10385 RNA polymerase beta subunit external 1 domain ATC04_RS06065 PF04565 RNA polymerase Rpb2, domain 3 ATC04_RS06070 PF04998 RNA polymerase Rpb1, domain 5 ATC04_RS06070 PF05000 RNA polymerase Rpb1, domain 4 ATC04_RS06070 PF04983 RNA polymerase Rpb1, domain 3 ATC04_RS06070 PF04997 RNA polymerase Rpb1, domain 1 ATC04_RS06070 PF00623 RNA polymerase Rpb1, domain 2 ATC04_RS06080 PF00164 Ribosomal protein S12/S23 ATC04_RS06085 PF00177 Ribosomal protein S7p/S5e ATC04_RS06090 PF14492 Elongation Factor G, domain II ATC04_RS06090 PF03764 Elongation factor G, domain IV ATC04_RS06090 PF00679 Elongation factor G C-terminus ATC04_RS06090 PF00009 Elongation factor Tu GTP binding domain ATC04_RS06090 PF03144 Elongation factor Tu domain 2 ATC04_RS06095 PF03143 Elongation factor Tu C-terminal domain ATC04_RS06095 PF00009 Elongation factor Tu GTP binding domain ATC04_RS06095 PF03144 Elongation factor Tu domain 2 ATC04_RS06105 PF00338 Ribosomal protein S10p/S20e ATC04_RS06110 PF00297 Ribosomal protein L3 ATC04_RS06115 PF00573 Ribosomal protein L4/L1 family ATC04_RS06120 PF00276 Ribosomal protein L23 ATC04_RS06125 PF03947 Ribosomal Proteins L2, C-terminal domain ATC04_RS06125 PF00181 Ribosomal Proteins L2, RNA binding domain ATC04_RS06130 PF00203 Ribosomal protein S19 ATC04_RS06135 PF00237 Ribosomal protein L22p/L17e ATC04_RS06140 PF00189 Ribosomal protein S3, C-terminal domain ATC04_RS06140 PF07650 KH domain ATC04_RS06145 PF00252 Ribosomal protein L16p/L10e ATC04_RS06150 PF00831 Ribosomal L29 protein ATC04_RS06155 PF00366 Ribosomal protein S17 ATC04_RS06180 PF00238 Ribosomal protein L14p/L23e ATC04_RS06185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATC04_RS06190 PF00673 ribosomal L5P family C-terminus ATC04_RS06190 PF00281 Ribosomal protein L5 ATC04_RS06195 PF00410 Ribosomal protein S8 ATC04_RS06200 PF00347 Ribosomal protein L6 ATC04_RS06205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ATC04_RS06210 PF03719 Ribosomal protein S5, C-terminal domain ATC04_RS06210 PF00333 Ribosomal protein S5, N-terminal domain ATC04_RS06215 PF00327 Ribosomal protein L30p/L7e ATC04_RS06220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATC04_RS06225 PF00344 SecY translocase ATC04_RS06235 PF00557 Metallopeptidase family M24 ATC04_RS06240 PF01176 Translation initiation factor 1A / IF-1 ATC04_RS06245 PF00416 Ribosomal protein S13/S18 ATC04_RS06250 PF00411 Ribosomal protein S11 ATC04_RS06255 PF01000 RNA polymerase Rpb3/RpoA insert domain ATC04_RS06255 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ATC04_RS06255 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ATC04_RS06260 PF01196 Ribosomal protein L17 ATC04_RS06270 PF01416 tRNA pseudouridine synthase ATC04_RS06275 PF00572 Ribosomal protein L13 ATC04_RS06280 PF00380 Ribosomal protein S9/S16 ATC04_RS06285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATC04_RS06285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATC04_RS06285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATC04_RS06285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATC04_RS06290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ATC04_RS06290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATC04_RS06290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ATC04_RS06315 PF03853 YjeF-related protein N-terminus ATC04_RS06315 PF01256 Carbohydrate kinase ATC04_RS06320 PF01648 4'-phosphopantetheinyl transferase superfamily ATC04_RS06325 PF01380 SIS domain ATC04_RS06330 PF00485 Phosphoribulokinase / Uridine kinase family ATC04_RS06335 PF01741 Large-conductance mechanosensitive channel, MscL ATC04_RS06340 PF00842 Alanine racemase, C-terminal domain ATC04_RS06340 PF01168 Alanine racemase, N-terminal domain ATC04_RS06345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATC04_RS06350 PF00583 Acetyltransferase (GNAT) family ATC04_RS06350 PF00814 Glycoprotease family ATC04_RS06355 PF00583 Acetyltransferase (GNAT) family ATC04_RS06360 PF00814 Glycoprotease family ATC04_RS06365 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATC04_RS06380 PF00324 Amino acid permease ATC04_RS06385 PF00166 Chaperonin 10 Kd subunit ATC04_RS06390 PF00118 TCP-1/cpn60 chaperonin family ATC04_RS06405 PF01757 Acyltransferase family ATC04_RS06410 PF00571 CBS domain ATC04_RS06410 PF00478 IMP dehydrogenase / GMP reductase domain ATC04_RS06415 PF13649 Methyltransferase domain ATC04_RS06415 PF08241 Methyltransferase domain ATC04_RS06435 PF00478 IMP dehydrogenase / GMP reductase domain ATC04_RS06450 PF00117 Glutamine amidotransferase class-I ATC04_RS06450 PF00958 GMP synthase C terminal domain ATC04_RS06450 PF02540 NAD synthase ATC04_RS06470 PF01812 5-formyltetrahydrofolate cyclo-ligase family ATC04_RS06475 PF13302 Acetyltransferase (GNAT) domain ATC04_RS06485 PF01037 Lrp/AsnC ligand binding domain ATC04_RS06500 PF00155 Aminotransferase class I and II ATC04_RS06510 PF03976 Polyphosphate kinase 2 (PPK2) ATC04_RS06520 PF02609 Exonuclease VII small subunit ATC04_RS06525 PF13742 OB-fold nucleic acid binding domain ATC04_RS06525 PF02601 Exonuclease VII, large subunit ATC04_RS06530 PF02401 LytB protein ATC04_RS06535 PF06071 Protein of unknown function (DUF933) ATC04_RS06535 PF01926 50S ribosome-binding GTPase ATC04_RS06550 PF01494 FAD binding domain ATC04_RS06585 PF00535 Glycosyl transferase family 2 ATC04_RS06600 PF01479 S4 domain ATC04_RS06600 PF00849 RNA pseudouridylate synthase ATC04_RS06605 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ATC04_RS06610 PF08768 Domain of unknown function (DUF1794) ATC04_RS06645 PF01243 Pyridoxamine 5'-phosphate oxidase ATC04_RS06645 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ATC04_RS06665 PF01022 Bacterial regulatory protein, arsR family ATC04_RS06670 PF01758 Sodium Bile acid symporter family ATC04_RS06675 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATC04_RS06705 PF03595 Voltage-dependent anion channel ATC04_RS06720 PF12697 Alpha/beta hydrolase family ATC04_RS06740 PF05690 Thiazole biosynthesis protein ThiG ATC04_RS06740 PF01266 FAD dependent oxidoreductase ATC04_RS06750 PF05690 Thiazole biosynthesis protein ThiG ATC04_RS06755 PF00899 ThiF family ATC04_RS06755 PF00581 Rhodanese-like domain ATC04_RS06765 PF03144 Elongation factor Tu domain 2 ATC04_RS06765 PF00009 Elongation factor Tu GTP binding domain ATC04_RS06765 PF00679 Elongation factor G C-terminus ATC04_RS06765 PF14492 Elongation Factor G, domain II ATC04_RS06780 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ATC04_RS06790 PF00037 4Fe-4S binding domain ATC04_RS06795 PF00155 Aminotransferase class I and II ATC04_RS06800 PF00285 Citrate synthase, C-terminal domain ATC04_RS06810 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ATC04_RS06810 PF14602 Hexapeptide repeat of succinyl-transferase ATC04_RS06815 PF01546 Peptidase family M20/M25/M40 ATC04_RS06815 PF07687 Peptidase dimerisation domain ATC04_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS06830 PF00497 Bacterial extracellular solute-binding proteins, family 3 ATC04_RS06835 PF00005 ABC transporter ATC04_RS06840 PF03641 Possible lysine decarboxylase ATC04_RS06850 PF01596 O-methyltransferase ATC04_RS06855 PF04542 Sigma-70 region 2 ATC04_RS06855 PF08281 Sigma-70, region 4 ATC04_RS06865 PF01883 Iron-sulfur cluster assembly protein ATC04_RS06865 PF10609 NUBPL iron-transfer P-loop NTPase ATC04_RS06875 PF00571 CBS domain ATC04_RS06875 PF01769 Divalent cation transporter ATC04_RS06875 PF03448 MgtE intracellular N domain ATC04_RS06885 PF00557 Metallopeptidase family M24 ATC04_RS06885 PF05195 Aminopeptidase P, N-terminal domain ATC04_RS06895 PF01555 DNA methylase ATC04_RS06900 PF00270 DEAD/DEAH box helicase ATC04_RS06900 PF00271 Helicase conserved C-terminal domain ATC04_RS06905 PF08461 Ribonuclease R winged-helix domain ATC04_RS06905 PF08206 Ribonuclease B OB domain ATC04_RS06905 PF00773 RNB domain ATC04_RS06905 PF00575 S1 RNA binding domain ATC04_RS06905 PF17876 Cold shock domain ATC04_RS06915 PF08362 YcdC-like protein, C-terminal region ATC04_RS06915 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS06920 PF01488 Shikimate / quinate 5-dehydrogenase ATC04_RS06920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ATC04_RS06920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ATC04_RS06925 PF01208 Uroporphyrinogen decarboxylase (URO-D) ATC04_RS06930 PF01593 Flavin containing amine oxidoreductase ATC04_RS06935 PF06778 Chlorite dismutase ATC04_RS06940 PF00762 Ferrochelatase ATC04_RS06945 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ATC04_RS06945 PF03900 Porphobilinogen deaminase, C-terminal domain ATC04_RS06955 PF00490 Delta-aminolevulinic acid dehydratase ATC04_RS06960 PF00202 Aminotransferase class-III ATC04_RS06965 PF13520 Amino acid permease ATC04_RS06970 PF03180 NLPA lipoprotein ATC04_RS06975 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS06980 PF09383 NIL domain ATC04_RS06980 PF00005 ABC transporter ATC04_RS06995 PF00580 UvrD/REP helicase N-terminal domain ATC04_RS06995 PF13361 UvrD-like helicase C-terminal domain ATC04_RS07000 PF00580 UvrD/REP helicase N-terminal domain ATC04_RS07000 PF13361 UvrD-like helicase C-terminal domain ATC04_RS07010 PF09297 NADH pyrophosphatase zinc ribbon domain ATC04_RS07010 PF00293 NUDIX domain ATC04_RS07010 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATC04_RS07015 PF13361 UvrD-like helicase C-terminal domain ATC04_RS07015 PF00570 HRDC domain ATC04_RS07015 PF00580 UvrD/REP helicase N-terminal domain ATC04_RS07030 PF13180 PDZ domain ATC04_RS07030 PF05362 Lon protease (S16) C-terminal proteolytic domain ATC04_RS07035 PF03699 Uncharacterised protein family (UPF0182) ATC04_RS07055 PF00872 Transposase, Mutator family ATC04_RS07065 PF04012 PspA/IM30 family ATC04_RS07075 PF13180 PDZ domain ATC04_RS07080 PF01012 Electron transfer flavoprotein domain ATC04_RS07085 PF00766 Electron transfer flavoprotein FAD-binding domain ATC04_RS07085 PF01012 Electron transfer flavoprotein domain ATC04_RS07100 PF00588 SpoU rRNA Methylase family ATC04_RS07110 PF00781 Diacylglycerol kinase catalytic domain ATC04_RS07120 PF00809 Pterin binding enzyme ATC04_RS07130 PF00266 Aminotransferase class-V ATC04_RS07155 PF07732 Multicopper oxidase ATC04_RS07165 PF00296 Luciferase-like monooxygenase ATC04_RS07180 PF12793 Sugar transport-related sRNA regulator N-term ATC04_RS07180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS07190 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS07195 PF00005 ABC transporter ATC04_RS07195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS07210 PF00072 Response regulator receiver domain ATC04_RS07210 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS07215 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS07215 PF00672 HAMP domain ATC04_RS07220 PF10646 Sporulation and spore germination ATC04_RS07220 PF10647 Lipoprotein LpqB beta-propeller domain ATC04_RS07225 PF00156 Phosphoribosyl transferase domain ATC04_RS07230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ATC04_RS07230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ATC04_RS07235 PF06224 Winged helix DNA-binding domain ATC04_RS07240 PF07516 SecA Wing and Scaffold domain ATC04_RS07240 PF01043 SecA preprotein cross-linking domain ATC04_RS07240 PF07517 SecA DEAD-like domain ATC04_RS07270 PF05088 Bacterial NAD-glutamate dehydrogenase ATC04_RS07275 PF07568 Histidine kinase ATC04_RS07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS07275 PF12282 Signal transduction histidine kinase ATC04_RS07280 PF05257 CHAP domain ATC04_RS07280 PF01476 LysM domain ATC04_RS07290 PF00348 Polyprenyl synthetase ATC04_RS07295 PF11799 impB/mucB/samB family C-terminal domain ATC04_RS07295 PF00817 impB/mucB/samB family ATC04_RS07305 PF02381 MraZ protein, putative antitoxin-like ATC04_RS07310 PF01795 MraW methylase family ATC04_RS07320 PF03717 Penicillin-binding Protein dimerisation domain ATC04_RS07320 PF00905 Penicillin binding protein transpeptidase domain ATC04_RS07325 PF01225 Mur ligase family, catalytic domain ATC04_RS07325 PF02875 Mur ligase family, glutamate ligase domain ATC04_RS07325 PF08245 Mur ligase middle domain ATC04_RS07330 PF08245 Mur ligase middle domain ATC04_RS07330 PF02875 Mur ligase family, glutamate ligase domain ATC04_RS07330 PF01225 Mur ligase family, catalytic domain ATC04_RS07335 PF00953 Glycosyl transferase family 4 ATC04_RS07340 PF08245 Mur ligase middle domain ATC04_RS07340 PF02875 Mur ligase family, glutamate ligase domain ATC04_RS07345 PF01098 Cell cycle protein ATC04_RS07350 PF03033 Glycosyltransferase family 28 N-terminal domain ATC04_RS07350 PF04101 Glycosyltransferase family 28 C-terminal domain ATC04_RS07355 PF01225 Mur ligase family, catalytic domain ATC04_RS07355 PF08245 Mur ligase middle domain ATC04_RS07355 PF02875 Mur ligase family, glutamate ligase domain ATC04_RS07360 PF08478 POTRA domain, FtsQ-type ATC04_RS07360 PF03799 Cell division protein FtsQ ATC04_RS07365 PF00091 Tubulin/FtsZ family, GTPase domain ATC04_RS07365 PF12327 FtsZ family, C-terminal domain ATC04_RS07370 PF02578 Multi-copper polyphenol oxidoreductase laccase ATC04_RS07375 PF04472 Cell division protein SepF ATC04_RS07385 PF05103 DivIVA protein ATC04_RS07390 PF01252 Signal peptidase (SPase) II ATC04_RS07395 PF00849 RNA pseudouridylate synthase ATC04_RS07400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATC04_RS07400 PF02811 PHP domain ATC04_RS07400 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATC04_RS07400 PF14579 Helix-hairpin-helix motif ATC04_RS07405 PF00815 Histidinol dehydrogenase ATC04_RS07410 PF03477 ATP cone domain ATC04_RS07415 PF00557 Metallopeptidase family M24 ATC04_RS07425 PF02548 Ketopantoate hydroxymethyltransferase ATC04_RS07430 PF00120 Glutamine synthetase, catalytic domain ATC04_RS07430 PF03951 Glutamine synthetase, beta-Grasp domain ATC04_RS07435 PF08335 GlnD PII-uridylyltransferase ATC04_RS07435 PF03710 Glutamate-ammonia ligase adenylyltransferase ATC04_RS07445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATC04_RS07455 PF03951 Glutamine synthetase, beta-Grasp domain ATC04_RS07455 PF00120 Glutamine synthetase, catalytic domain ATC04_RS07470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ATC04_RS07470 PF04055 Radical SAM superfamily ATC04_RS07475 PF03099 Biotin/lipoate A/B protein ligase family ATC04_RS07480 PF00069 Protein kinase domain ATC04_RS07480 PF03793 PASTA domain ATC04_RS07490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATC04_RS07490 PF02817 e3 binding domain ATC04_RS07490 PF00364 Biotin-requiring enzyme ATC04_RS07495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS07495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATC04_RS07500 PF00883 Cytosol aminopeptidase family, catalytic domain ATC04_RS07500 PF02789 Cytosol aminopeptidase family, N-terminal domain ATC04_RS07520 PF04545 Sigma-70, region 4 ATC04_RS07520 PF04539 Sigma-70 region 3 ATC04_RS07520 PF00140 Sigma-70 factor, region 1.2 ATC04_RS07520 PF04542 Sigma-70 region 2 ATC04_RS07525 PF01751 Toprim domain ATC04_RS07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS07525 PF00986 DNA gyrase B subunit, carboxyl terminus ATC04_RS07525 PF00204 DNA gyrase B ATC04_RS07535 PF03965 Penicillinase repressor ATC04_RS07540 PF01654 Cytochrome bd terminal oxidase subunit I ATC04_RS07545 PF02322 Cytochrome bd terminal oxidase subunit II ATC04_RS07550 PF00005 ABC transporter ATC04_RS07550 PF00664 ABC transporter transmembrane region ATC04_RS07555 PF03989 DNA gyrase C-terminal domain, beta-propeller ATC04_RS07555 PF00521 DNA gyrase/topoisomerase IV, subunit A ATC04_RS07560 PF13302 Acetyltransferase (GNAT) domain ATC04_RS07560 PF00027 Cyclic nucleotide-binding domain ATC04_RS07575 PF11268 Protein of unknown function (DUF3071) ATC04_RS07590 PF00692 dUTPase ATC04_RS07610 PF02080 TrkA-C domain ATC04_RS07610 PF02254 TrkA-N domain ATC04_RS07615 PF02080 TrkA-C domain ATC04_RS07615 PF02254 TrkA-N domain ATC04_RS07620 PF13520 Amino acid permease ATC04_RS07625 PF05958 tRNA (Uracil-5-)-methyltransferase ATC04_RS07630 PF00330 Aconitase family (aconitate hydratase) ATC04_RS07630 PF00694 Aconitase C-terminal domain ATC04_RS07670 PF05199 GMC oxidoreductase ATC04_RS07675 PF02779 Transketolase, pyrimidine binding domain ATC04_RS07675 PF02780 Transketolase, C-terminal domain ATC04_RS07675 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ATC04_RS07680 PF04167 Protein of unknown function (DUF402) ATC04_RS07705 PF00764 Arginosuccinate synthase ATC04_RS07710 PF00248 Aldo/keto reductase family ATC04_RS07725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS07725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS07725 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS07730 PF00108 Thiolase, N-terminal domain ATC04_RS07730 PF02803 Thiolase, C-terminal domain ATC04_RS07745 PF01212 Beta-eliminating lyase ATC04_RS07750 PF00106 short chain dehydrogenase ATC04_RS07760 PF01641 SelR domain ATC04_RS07770 PF04073 Aminoacyl-tRNA editing domain ATC04_RS07775 PF02657 Fe-S metabolism associated domain ATC04_RS07780 PF00581 Rhodanese-like domain ATC04_RS07790 PF03594 Benzoate membrane transport protein ATC04_RS07840 PF01327 Polypeptide deformylase ATC04_RS07845 PF02911 Formyl transferase, C-terminal domain ATC04_RS07845 PF00551 Formyl transferase ATC04_RS07850 PF01029 NusB family ATC04_RS07850 PF01189 16S rRNA methyltransferase RsmB/F ATC04_RS07855 PF00834 Ribulose-phosphate 3 epimerase family ATC04_RS07865 PF01872 RibD C-terminal domain ATC04_RS07865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATC04_RS07870 PF00677 Lumazine binding domain ATC04_RS07875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ATC04_RS07875 PF00925 GTP cyclohydrolase II ATC04_RS07880 PF00885 6,7-dimethyl-8-ribityllumazine synthase ATC04_RS07885 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ATC04_RS07890 PF08029 HisG, C-terminal domain ATC04_RS07890 PF01634 ATP phosphoribosyltransferase ATC04_RS07895 PF00977 Histidine biosynthesis protein ATC04_RS07905 PF01502 Phosphoribosyl-AMP cyclohydrolase ATC04_RS07910 PF00425 chorismate binding enzyme ATC04_RS07910 PF04715 Anthranilate synthase component I, N terminal region ATC04_RS07925 PF00218 Indole-3-glycerol phosphate synthase ATC04_RS07930 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS07935 PF00290 Tryptophan synthase alpha chain ATC04_RS07940 PF01790 Prolipoprotein diacylglyceryl transferase ATC04_RS07945 PF00310 Glutamine amidotransferases class-II ATC04_RS07945 PF01645 Conserved region in glutamate synthase ATC04_RS07945 PF01493 GXGXG motif ATC04_RS07945 PF04898 Glutamate synthase central domain ATC04_RS07950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS07950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ATC04_RS07955 PF00224 Pyruvate kinase, barrel domain ATC04_RS07955 PF02887 Pyruvate kinase, alpha/beta domain ATC04_RS07965 PF00072 Response regulator receiver domain ATC04_RS07965 PF03861 ANTAR domain ATC04_RS07970 PF01384 Phosphate transporter family ATC04_RS07980 PF01872 RibD C-terminal domain ATC04_RS07980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATC04_RS07985 PF03061 Thioesterase superfamily ATC04_RS07990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ATC04_RS07990 PF00476 DNA polymerase family A ATC04_RS07990 PF01367 5'-3' exonuclease, C-terminal SAM fold ATC04_RS07995 PF17668 Acetyltransferase (GNAT) domain ATC04_RS07995 PF13530 Sterol carrier protein domain ATC04_RS08005 PF00575 S1 RNA binding domain ATC04_RS08025 PF05175 Methyltransferase small domain ATC04_RS08030 PF09186 Domain of unknown function (DUF1949) ATC04_RS08030 PF01205 Uncharacterized protein family UPF0029 ATC04_RS08040 PF01121 Dephospho-CoA kinase ATC04_RS08065 PF12344 Ultra-violet resistance protein B ATC04_RS08065 PF04851 Type III restriction enzyme, res subunit ATC04_RS08065 PF00271 Helicase conserved C-terminal domain ATC04_RS08065 PF17757 UvrB interaction domain ATC04_RS08065 PF02151 UvrB/uvrC motif ATC04_RS08070 PF03741 Integral membrane protein TerC family ATC04_RS08075 PF01047 MarR family ATC04_RS08080 PF00561 alpha/beta hydrolase fold ATC04_RS08125 PF08148 DSHCT (NUC185) domain ATC04_RS08125 PF00271 Helicase conserved C-terminal domain ATC04_RS08125 PF00270 DEAD/DEAH box helicase ATC04_RS08130 PF13649 Methyltransferase domain ATC04_RS08150 PF05114 Protein of unknown function (DUF692) ATC04_RS08170 PF17760 UvrA interaction domain ATC04_RS08170 PF17755 UvrA DNA-binding domain ATC04_RS08170 PF00005 ABC transporter ATC04_RS08175 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS08180 PF01553 Acyltransferase ATC04_RS08185 PF12826 Helix-hairpin-helix motif ATC04_RS08185 PF01541 GIY-YIG catalytic domain ATC04_RS08185 PF02151 UvrB/uvrC motif ATC04_RS08185 PF08459 UvrC Helix-hairpin-helix N-terminal ATC04_RS08190 PF03668 P-loop ATPase protein family ATC04_RS08195 PF01933 Uncharacterised protein family UPF0052 ATC04_RS08200 PF02650 WhiA C-terminal HTH domain ATC04_RS08200 PF14527 WhiA LAGLIDADG-like domain ATC04_RS08200 PF10298 WhiA N-terminal LAGLIDADG-like domain ATC04_RS08205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ATC04_RS08205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ATC04_RS08210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATC04_RS08210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATC04_RS08215 PF00162 Phosphoglycerate kinase ATC04_RS08220 PF00121 Triosephosphate isomerase ATC04_RS08225 PF03840 Preprotein translocase SecG subunit ATC04_RS08235 PF01266 FAD dependent oxidoreductase ATC04_RS08240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATC04_RS08250 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ATC04_RS08250 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ATC04_RS08255 PF00342 Phosphoglucose isomerase ATC04_RS08260 PF00923 Transaldolase/Fructose-6-phosphate aldolase ATC04_RS08265 PF00456 Transketolase, thiamine diphosphate binding domain ATC04_RS08265 PF02780 Transketolase, C-terminal domain ATC04_RS08265 PF02779 Transketolase, pyrimidine binding domain ATC04_RS08270 PF01040 UbiA prenyltransferase family ATC04_RS08295 PF00005 ABC transporter ATC04_RS08305 PF01458 Uncharacterized protein family (UPF0051) ATC04_RS08310 PF01458 Uncharacterized protein family (UPF0051) ATC04_RS08315 PF00005 ABC transporter ATC04_RS08320 PF01883 Iron-sulfur cluster assembly protein ATC04_RS08325 PF01883 Iron-sulfur cluster assembly protein ATC04_RS08330 PF00108 Thiolase, N-terminal domain ATC04_RS08330 PF02803 Thiolase, C-terminal domain ATC04_RS08335 PF00501 AMP-binding enzyme ATC04_RS08335 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS08340 PF02632 BioY family ATC04_RS08345 PF02361 Cobalt transport protein ATC04_RS08350 PF00005 ABC transporter ATC04_RS08355 PF01810 LysE type translocator ATC04_RS08360 PF01037 Lrp/AsnC ligand binding domain ATC04_RS08360 PF13404 AsnC-type helix-turn-helix domain ATC04_RS08365 PF07690 Major Facilitator Superfamily ATC04_RS08370 PF00890 FAD binding domain ATC04_RS08385 PF00436 Single-strand binding protein family ATC04_RS08390 PF00005 ABC transporter ATC04_RS08390 PF12848 ABC transporter ATC04_RS08400 PF00376 MerR family regulatory protein ATC04_RS08400 PF09278 MerR, DNA binding ATC04_RS08415 PF01152 Bacterial-like globin ATC04_RS08425 PF11838 ERAP1-like C-terminal domain ATC04_RS08425 PF01433 Peptidase family M1 domain ATC04_RS08430 PF02502 Ribose/Galactose Isomerase ATC04_RS08435 PF06827 Zinc finger found in FPG and IleRS ATC04_RS08435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATC04_RS08435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATC04_RS08455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATC04_RS08455 PF05697 Bacterial trigger factor protein (TF) ATC04_RS08455 PF05698 Bacterial trigger factor protein (TF) C-terminus ATC04_RS08460 PF00574 Clp protease ATC04_RS08465 PF00574 Clp protease ATC04_RS08470 PF07724 AAA domain (Cdc48 subfamily) ATC04_RS08470 PF06689 ClpX C4-type zinc finger ATC04_RS08470 PF10431 C-terminal, D2-small domain, of ClpB protein ATC04_RS08475 PF01323 DSBA-like thioredoxin domain ATC04_RS08485 PF00133 tRNA synthetases class I (I, L, M and V) ATC04_RS08485 PF08264 Anticodon-binding domain of tRNA ATC04_RS08500 PF00106 short chain dehydrogenase ATC04_RS08510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ATC04_RS08510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ATC04_RS08515 PF01507 Phosphoadenosine phosphosulfate reductase family ATC04_RS08520 PF01507 Phosphoadenosine phosphosulfate reductase family ATC04_RS08525 PF00009 Elongation factor Tu GTP binding domain ATC04_RS08535 PF00005 ABC transporter ATC04_RS08545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATC04_RS08550 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS08555 PF11490 DNA polymerase III polC-type N-terminus II ATC04_RS08555 PF14480 DNA polymerase III polC-type N-terminus I ATC04_RS08555 PF02811 PHP domain ATC04_RS08555 PF14579 Helix-hairpin-helix motif ATC04_RS08555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATC04_RS08555 PF00929 Exonuclease ATC04_RS08555 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATC04_RS08570 PF03176 MMPL family ATC04_RS08575 PF00072 Response regulator receiver domain ATC04_RS08575 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS08580 PF07730 Histidine kinase ATC04_RS08595 PF00133 tRNA synthetases class I (I, L, M and V) ATC04_RS08595 PF08264 Anticodon-binding domain of tRNA ATC04_RS08600 PF02875 Mur ligase family, glutamate ligase domain ATC04_RS08600 PF08245 Mur ligase middle domain ATC04_RS08610 PF00334 Nucleoside diphosphate kinase ATC04_RS08625 PF01594 AI-2E family transporter ATC04_RS08630 PF01636 Phosphotransferase enzyme family ATC04_RS08645 PF10150 Ribonuclease E/G family ATC04_RS08650 PF00829 Ribosomal prokaryotic L21 protein ATC04_RS08655 PF01016 Ribosomal L27 protein ATC04_RS08660 PF09269 Domain of unknown function (DUF1967) ATC04_RS08660 PF01018 GTP1/OBG ATC04_RS08660 PF01926 50S ribosome-binding GTPase ATC04_RS08665 PF01472 PUA domain ATC04_RS08665 PF00696 Amino acid kinase family ATC04_RS08670 PF00171 Aldehyde dehydrogenase family ATC04_RS08680 PF01467 Cytidylyltransferase-like ATC04_RS08725 PF01544 CorA-like Mg2+ transporter protein ATC04_RS08745 PF00324 Amino acid permease ATC04_RS08750 PF00155 Aminotransferase class I and II ATC04_RS08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS08775 PF03466 LysR substrate binding domain ATC04_RS08780 PF02910 Fumarate reductase flavoprotein C-term ATC04_RS08780 PF00890 FAD binding domain ATC04_RS08785 PF02293 AmiS/UreI family transporter ATC04_RS08790 PF12848 ABC transporter ATC04_RS08790 PF16326 ABC transporter C-terminal domain ATC04_RS08790 PF00005 ABC transporter ATC04_RS08810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS08810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS08825 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS08835 PF01168 Alanine racemase, N-terminal domain ATC04_RS08840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS08840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS08840 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS08845 PF01168 Alanine racemase, N-terminal domain ATC04_RS08855 PF07972 NrdI Flavodoxin like ATC04_RS08860 PF00317 Ribonucleotide reductase, all-alpha domain ATC04_RS08860 PF08343 Ribonucleotide reductase N-terminal ATC04_RS08860 PF02867 Ribonucleotide reductase, barrel domain ATC04_RS08865 PF00268 Ribonucleotide reductase, small chain ATC04_RS08870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ATC04_RS08870 PF00391 PEP-utilising enzyme, mobile domain ATC04_RS08875 PF16859 Tetracyclin repressor-like, C-terminal domain ATC04_RS08875 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS08880 PF00083 Sugar (and other) transporter ATC04_RS08880 PF07690 Major Facilitator Superfamily ATC04_RS08885 PF00313 'Cold-shock' DNA-binding domain ATC04_RS08915 PF00462 Glutaredoxin ATC04_RS08920 PF02586 SOS response associated peptidase (SRAP) ATC04_RS08930 PF00753 Metallo-beta-lactamase superfamily ATC04_RS08935 PF00107 Zinc-binding dehydrogenase ATC04_RS08935 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS08940 PF00248 Aldo/keto reductase family ATC04_RS08945 PF07690 Major Facilitator Superfamily ATC04_RS08945 PF00083 Sugar (and other) transporter ATC04_RS08950 PF00106 short chain dehydrogenase ATC04_RS08950 PF00561 alpha/beta hydrolase fold ATC04_RS08965 PF01336 OB-fold nucleic acid binding domain ATC04_RS08965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATC04_RS08965 PF14579 Helix-hairpin-helix motif ATC04_RS08965 PF02811 PHP domain ATC04_RS08965 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATC04_RS08995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATC04_RS08995 PF03129 Anticodon binding domain ATC04_RS08995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATC04_RS09000 PF01230 HIT domain ATC04_RS09005 PF04055 Radical SAM superfamily ATC04_RS09005 PF06968 Biotin and Thiamin Synthesis associated domain ATC04_RS09010 PF00202 Aminotransferase class-III ATC04_RS09015 PF00155 Aminotransferase class I and II ATC04_RS09020 PF00067 Cytochrome P450 ATC04_RS09035 PF13732 Domain of unknown function (DUF4162) ATC04_RS09035 PF00005 ABC transporter ATC04_RS09045 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS09050 PF00455 DeoR C terminal sensor domain ATC04_RS09050 PF08220 DeoR-like helix-turn-helix domain ATC04_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS09065 PF13416 Bacterial extracellular solute-binding protein ATC04_RS09070 PF03009 Glycerophosphoryl diester phosphodiesterase family ATC04_RS09075 PF01680 SOR/SNZ family ATC04_RS09090 PF00583 Acetyltransferase (GNAT) family ATC04_RS09095 PF01432 Peptidase family M3 ATC04_RS09105 PF01174 SNO glutamine amidotransferase family ATC04_RS09110 PF01709 Transcriptional regulator ATC04_RS09115 PF02075 Crossover junction endodeoxyribonuclease RuvC ATC04_RS09120 PF07499 RuvA, C-terminal domain ATC04_RS09120 PF01330 RuvA N terminal domain ATC04_RS09125 PF05491 RuvB C-terminal winged helix domain ATC04_RS09125 PF17864 RuvB AAA lid domain ATC04_RS09125 PF05496 Holliday junction DNA helicase RuvB P-loop domain ATC04_RS09130 PF02699 Preprotein translocase subunit ATC04_RS09135 PF02355 Protein export membrane protein ATC04_RS09135 PF07549 SecD/SecF GG Motif ATC04_RS09140 PF07549 SecD/SecF GG Motif ATC04_RS09140 PF02355 Protein export membrane protein ATC04_RS09145 PF13291 ACT domain ATC04_RS09145 PF02824 TGS domain ATC04_RS09145 PF04607 Region found in RelA / SpoT proteins ATC04_RS09155 PF03993 Domain of Unknown Function (DUF349) ATC04_RS09160 PF03129 Anticodon binding domain ATC04_RS09160 PF13393 Histidyl-tRNA synthetase ATC04_RS09165 PF02938 GAD domain ATC04_RS09165 PF00152 tRNA synthetases class II (D, K and N) ATC04_RS09165 PF01336 OB-fold nucleic acid binding domain ATC04_RS09180 PF02580 D-Tyr-tRNA(Tyr) deacylase ATC04_RS09185 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS09185 PF16193 AAA C-terminal domain ATC04_RS09185 PF12002 MgsA AAA+ ATPase C terminal ATC04_RS09190 PF00163 Ribosomal protein S4/S9 N-terminal domain ATC04_RS09190 PF01479 S4 domain ATC04_RS09205 PF02272 DHHA1 domain ATC04_RS09205 PF01411 tRNA synthetases class II (A) ATC04_RS09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATC04_RS09210 PF03652 Holliday junction resolvase ATC04_RS09220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATC04_RS09220 PF01488 Shikimate / quinate 5-dehydrogenase ATC04_RS09220 PF08501 Shikimate dehydrogenase substrate binding domain ATC04_RS09225 PF01264 Chorismate synthase ATC04_RS09230 PF01202 Shikimate kinase ATC04_RS09235 PF01761 3-dehydroquinate synthase ATC04_RS09245 PF08207 Elongation factor P (EF-P) KOW-like domain ATC04_RS09245 PF09285 Elongation factor P, C-terminal ATC04_RS09245 PF01132 Elongation factor P (EF-P) OB domain ATC04_RS09250 PF01029 NusB family ATC04_RS09255 PF00156 Phosphoribosyl transferase domain ATC04_RS09260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATC04_RS09260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATC04_RS09265 PF01979 Amidohydrolase family ATC04_RS09275 PF00117 Glutamine amidotransferase class-I ATC04_RS09275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ATC04_RS09280 PF02142 MGS-like domain ATC04_RS09280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATC04_RS09280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATC04_RS09285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ATC04_RS09295 PF00625 Guanylate kinase ATC04_RS09300 PF01192 RNA polymerase Rpb6 ATC04_RS09305 PF04127 DNA / pantothenate metabolism flavoprotein ATC04_RS09305 PF02441 Flavoprotein ATC04_RS09310 PF02773 S-adenosylmethionine synthetase, C-terminal domain ATC04_RS09310 PF02772 S-adenosylmethionine synthetase, central domain ATC04_RS09310 PF00438 S-adenosylmethionine synthetase, N-terminal domain ATC04_RS09315 PF17764 3′ DNA-binding domain (3′BD) ATC04_RS09325 PF00535 Glycosyl transferase family 2 ATC04_RS09325 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ATC04_RS09335 PF04198 Putative sugar-binding domain ATC04_RS09340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ATC04_RS09340 PF01266 FAD dependent oxidoreductase ATC04_RS09345 PF00230 Major intrinsic protein ATC04_RS09350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ATC04_RS09350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ATC04_RS09365 PF09334 tRNA synthetases class I (M) ATC04_RS09365 PF13603 Leucyl-tRNA synthetase, Domain 2 ATC04_RS09365 PF00133 tRNA synthetases class I (I, L, M and V) ATC04_RS09365 PF08264 Anticodon-binding domain of tRNA ATC04_RS09370 PF02645 Uncharacterised protein, DegV family COG1307 ATC04_RS09380 PF00753 Metallo-beta-lactamase superfamily ATC04_RS09380 PF13567 Domain of unknown function (DUF4131) ATC04_RS09380 PF03772 Competence protein ATC04_RS09390 PF01649 Ribosomal protein S20 ATC04_RS09400 PF00009 Elongation factor Tu GTP binding domain ATC04_RS09400 PF06421 GTP-binding protein LepA C-terminus ATC04_RS09400 PF00679 Elongation factor G C-terminus ATC04_RS09405 PF04055 Radical SAM superfamily ATC04_RS09420 PF01628 HrcA protein C terminal domain ATC04_RS09420 PF08220 DeoR-like helix-turn-helix domain ATC04_RS09425 PF00684 DnaJ central domain ATC04_RS09425 PF01556 DnaJ C terminal domain ATC04_RS09425 PF00226 DnaJ domain ATC04_RS09430 PF04452 RNA methyltransferase ATC04_RS09440 PF02562 PhoH-like protein ATC04_RS09445 PF02130 Uncharacterized protein family UPF0054 ATC04_RS09450 PF01595 Cyclin M transmembrane N-terminal domain ATC04_RS09450 PF03471 Transporter associated domain ATC04_RS09450 PF00571 CBS domain ATC04_RS09455 PF07650 KH domain ATC04_RS09455 PF01926 50S ribosome-binding GTPase ATC04_RS09460 PF01494 FAD binding domain ATC04_RS09465 PF08502 LeuA allosteric (dimerisation) domain ATC04_RS09465 PF00682 HMGL-like ATC04_RS09470 PF11967 Recombination protein O N terminal ATC04_RS09470 PF02565 Recombination protein O C terminal ATC04_RS09475 PF01255 Putative undecaprenyl diphosphate synthase ATC04_RS09480 PF12146 Serine aminopeptidase, S33 ATC04_RS09485 PF01180 Dihydroorotate dehydrogenase ATC04_RS09495 PF01546 Peptidase family M20/M25/M40 ATC04_RS09495 PF07687 Peptidase dimerisation domain ATC04_RS09500 PF01521 Iron-sulphur cluster biosynthesis ATC04_RS09505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ATC04_RS09510 PF00115 Cytochrome C and Quinol oxidase polypeptide I ATC04_RS09515 PF12270 Cytochrome c oxidase subunit IV ATC04_RS09520 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS09520 PF07702 UTRA domain ATC04_RS09530 PF13631 Cytochrome b(N-terminal)/b6/petB ATC04_RS09535 PF00355 Rieske [2Fe-2S] domain ATC04_RS09540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ATC04_RS09540 PF00034 Cytochrome c ATC04_RS09545 PF00510 Cytochrome c oxidase subunit III ATC04_RS09550 PF00591 Glycosyl transferase family, a/b domain ATC04_RS09550 PF02885 Glycosyl transferase family, helical bundle domain ATC04_RS09580 PF01872 RibD C-terminal domain ATC04_RS09600 PF01327 Polypeptide deformylase ATC04_RS09605 PF13649 Methyltransferase domain ATC04_RS09615 PF01145 SPFH domain / Band 7 family ATC04_RS09620 PF13397 RNA polymerase-binding protein ATC04_RS09625 PF00535 Glycosyl transferase family 2 ATC04_RS09635 PF08148 DSHCT (NUC185) domain ATC04_RS09635 PF00271 Helicase conserved C-terminal domain ATC04_RS09635 PF00270 DEAD/DEAH box helicase ATC04_RS09640 PF00902 Sec-independent protein translocase protein (TatC) ATC04_RS09645 PF02416 mttA/Hcf106 family ATC04_RS09660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATC04_RS09665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ATC04_RS09665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ATC04_RS09670 PF03136 Pup-ligase protein ATC04_RS09675 PF05639 Pup-like protein ATC04_RS09680 PF03136 Pup-ligase protein ATC04_RS09685 PF16450 Proteasomal ATPase OB C-terminal domain ATC04_RS09685 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS09685 PF17758 Proteasomal ATPase OB N-terminal domain ATC04_RS09690 PF08704 tRNA methyltransferase complex GCD14 subunit ATC04_RS09695 PF02163 Peptidase family M50 ATC04_RS09695 PF00571 CBS domain ATC04_RS09700 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS09710 PF01406 tRNA synthetases class I (C) catalytic domain ATC04_RS09715 PF02673 Bacitracin resistance protein BacA ATC04_RS09735 PF07687 Peptidase dimerisation domain ATC04_RS09735 PF01546 Peptidase family M20/M25/M40 ATC04_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS09745 PF00672 HAMP domain ATC04_RS09745 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS09750 PF00072 Response regulator receiver domain ATC04_RS09750 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS09755 PF01566 Natural resistance-associated macrophage protein ATC04_RS09765 PF04205 FMN-binding domain ATC04_RS09765 PF00890 FAD binding domain ATC04_RS09775 PF00561 alpha/beta hydrolase fold ATC04_RS09780 PF13439 Glycosyltransferase Family 4 ATC04_RS09780 PF00534 Glycosyl transferases group 1 ATC04_RS09795 PF02803 Thiolase, C-terminal domain ATC04_RS09795 PF00108 Thiolase, N-terminal domain ATC04_RS09850 PF01433 Peptidase family M1 domain ATC04_RS09850 PF11838 ERAP1-like C-terminal domain ATC04_RS09855 PF13784 Fic/DOC family N-terminal ATC04_RS09855 PF02661 Fic/DOC family ATC04_RS09860 PF03099 Biotin/lipoate A/B protein ligase family ATC04_RS09865 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS09865 PF00107 Zinc-binding dehydrogenase ATC04_RS09870 PF01197 Ribosomal protein L31 ATC04_RS09875 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATC04_RS09875 PF00588 SpoU rRNA Methylase family ATC04_RS09925 PF02384 N-6 DNA Methylase ATC04_RS09925 PF12161 HsdM N-terminal domain ATC04_RS09930 PF00588 SpoU rRNA Methylase family ATC04_RS09940 PF00005 ABC transporter ATC04_RS10000 PF00005 ABC transporter ATC04_RS10000 PF12848 ABC transporter ATC04_RS10050 PF00929 Exonuclease ATC04_RS10065 PF01381 Helix-turn-helix ATC04_RS10070 PF00698 Acyl transferase domain ATC04_RS10070 PF16197 Ketoacyl-synthetase C-terminal extension ATC04_RS10070 PF14765 Polyketide synthase dehydratase ATC04_RS10070 PF00550 Phosphopantetheine attachment site ATC04_RS10070 PF02801 Beta-ketoacyl synthase, C-terminal domain ATC04_RS10070 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS10070 PF08659 KR domain ATC04_RS10070 PF00109 Beta-ketoacyl synthase, N-terminal domain ATC04_RS10085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS10085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS10085 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS10090 PF01327 Polypeptide deformylase ATC04_RS10120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ATC04_RS10120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ATC04_RS10130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATC04_RS10130 PF00403 Heavy-metal-associated domain ATC04_RS10130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS10135 PF03883 Peroxide stress protein YaaA ATC04_RS10150 PF01784 NIF3 (NGG1p interacting factor 3) ATC04_RS10155 PF01625 Peptide methionine sulfoxide reductase ATC04_RS10160 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS10165 PF00132 Bacterial transferase hexapeptide (six repeats) ATC04_RS10175 PF17760 UvrA interaction domain ATC04_RS10175 PF00005 ABC transporter ATC04_RS10175 PF17755 UvrA DNA-binding domain ATC04_RS10195 PF01938 TRAM domain ATC04_RS10195 PF05958 tRNA (Uracil-5-)-methyltransferase ATC04_RS10200 PF16884 N-terminal domain of oxidoreductase ATC04_RS10200 PF00107 Zinc-binding dehydrogenase ATC04_RS10220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATC04_RS10220 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ATC04_RS10225 PF07729 FCD domain ATC04_RS10225 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS10230 PF02447 GntP family permease ATC04_RS10240 PF04226 Transglycosylase associated protein ATC04_RS10250 PF03006 Haemolysin-III related ATC04_RS10255 PF05532 CsbD-like ATC04_RS10265 PF01594 AI-2E family transporter ATC04_RS10275 PF00578 AhpC/TSA family ATC04_RS10280 PF11253 Protein of unknown function (DUF3052) ATC04_RS10285 PF17831 Pyruvate dehydrogenase E1 component middle domain ATC04_RS10285 PF00456 Transketolase, thiamine diphosphate binding domain ATC04_RS10290 PF17853 GGDEF-like domain ATC04_RS10290 PF13556 PucR C-terminal helix-turn-helix domain ATC04_RS10295 PF00698 Acyl transferase domain ATC04_RS10300 PF00550 Phosphopantetheine attachment site ATC04_RS10305 PF00109 Beta-ketoacyl synthase, N-terminal domain ATC04_RS10305 PF02801 Beta-ketoacyl synthase, C-terminal domain ATC04_RS10325 PF00589 Phage integrase family ATC04_RS10325 PF02899 Phage integrase, N-terminal SAM-like domain ATC04_RS10330 PF02481 DNA recombination-mediator protein A ATC04_RS10330 PF17782 DprA winged helix domain ATC04_RS10335 PF13335 Magnesium chelatase, subunit ChlI C-terminal ATC04_RS10335 PF01078 Magnesium chelatase, subunit ChlI ATC04_RS10340 PF02021 Uncharacterised protein family UPF0102 ATC04_RS10345 PF10611 Protein of unknown function (DUF2469) ATC04_RS10350 PF01351 Ribonuclease HII ATC04_RS10355 PF10502 Signal peptidase, peptidase S26 ATC04_RS10370 PF10502 Signal peptidase, peptidase S26 ATC04_RS10375 PF01245 Ribosomal protein L19 ATC04_RS10380 PF01746 tRNA (Guanine-1)-methyltransferase ATC04_RS10385 PF01782 RimM N-terminal domain ATC04_RS10395 PF00886 Ribosomal protein S16 ATC04_RS10400 PF01810 LysE type translocator ATC04_RS10420 PF03239 Iron permease FTR1 family ATC04_RS10425 PF13473 Cupredoxin-like domain ATC04_RS10425 PF09375 Imelysin ATC04_RS10430 PF04261 Dyp-type peroxidase family ATC04_RS10430 PF10518 TAT (twin-arginine translocation) pathway signal sequence ATC04_RS10435 PF00108 Thiolase, N-terminal domain ATC04_RS10435 PF02803 Thiolase, C-terminal domain ATC04_RS10440 PF13396 Phospholipase_D-nuclease N-terminal ATC04_RS10440 PF13091 PLD-like domain ATC04_RS10450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATC04_RS10455 PF00501 AMP-binding enzyme ATC04_RS10455 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS10460 PF00501 AMP-binding enzyme ATC04_RS10460 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS10475 PF02978 Signal peptide binding domain ATC04_RS10475 PF02881 SRP54-type protein, helical bundle domain ATC04_RS10475 PF00448 SRP54-type protein, GTPase domain ATC04_RS10480 PF01551 Peptidase family M23 ATC04_RS10480 PF10145 Phage-related minor tail protein ATC04_RS10480 PF01464 Transglycosylase SLT domain ATC04_RS10485 PF00909 Ammonium Transporter Family ATC04_RS10500 PF02245 Methylpurine-DNA glycosylase (MPG) ATC04_RS10510 PF01757 Acyltransferase family ATC04_RS10515 PF00448 SRP54-type protein, GTPase domain ATC04_RS10515 PF02881 SRP54-type protein, helical bundle domain ATC04_RS10520 PF07690 Major Facilitator Superfamily ATC04_RS10525 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ATC04_RS10525 PF00535 Glycosyl transferase family 2 ATC04_RS10530 PF02463 RecF/RecN/SMC N terminal domain ATC04_RS10530 PF06470 SMC proteins Flexible Hinge Domain ATC04_RS10540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATC04_RS10540 PF06827 Zinc finger found in FPG and IleRS ATC04_RS10540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATC04_RS10545 PF14622 Ribonuclease-III-like ATC04_RS10545 PF00035 Double-stranded RNA binding motif ATC04_RS10550 PF01783 Ribosomal L32p protein family ATC04_RS10570 PF01695 IstB-like ATP binding protein ATC04_RS10580 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ATC04_RS10585 PF01467 Cytidylyltransferase-like ATC04_RS10590 PF17102 Stealth protein CR3, conserved region 3 ATC04_RS10590 PF11380 Stealth protein CR2, conserved region 2 ATC04_RS10590 PF17103 Stealth protein CR4, conserved region 4 ATC04_RS10590 PF17101 Stealth protein CR1, conserved region 1 ATC04_RS10605 PF00535 Glycosyl transferase family 2 ATC04_RS10610 PF14524 Wzt C-terminal domain ATC04_RS10610 PF00005 ABC transporter ATC04_RS10615 PF01061 ABC-2 type transporter ATC04_RS10620 PF03816 Cell envelope-related transcriptional attenuator domain ATC04_RS10625 PF00483 Nucleotidyl transferase ATC04_RS10630 PF01467 Cytidylyltransferase-like ATC04_RS10635 PF00155 Aminotransferase class I and II ATC04_RS10650 PF17191 RecG wedge domain ATC04_RS10650 PF00271 Helicase conserved C-terminal domain ATC04_RS10650 PF00270 DEAD/DEAH box helicase ATC04_RS10655 PF13684 Dihydroxyacetone kinase family ATC04_RS10655 PF02734 DAK2 domain ATC04_RS10660 PF03816 Cell envelope-related transcriptional attenuator domain ATC04_RS10670 PF01820 D-ala D-ala ligase N-terminus ATC04_RS10670 PF07478 D-ala D-ala ligase C-terminus ATC04_RS10675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ATC04_RS10675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATC04_RS10685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATC04_RS10690 PF00694 Aconitase C-terminal domain ATC04_RS10695 PF00330 Aconitase family (aconitate hydratase) ATC04_RS10705 PF00586 AIR synthase related protein, N-terminal domain ATC04_RS10705 PF02769 AIR synthase related protein, C-terminal domain ATC04_RS10715 PF03193 RsgA GTPase ATC04_RS10735 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS10740 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATC04_RS10745 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS10750 PF16363 GDP-mannose 4,6 dehydratase ATC04_RS10755 PF01063 Amino-transferase class IV ATC04_RS10760 PF00180 Isocitrate/isopropylmalate dehydrogenase ATC04_RS10765 PF07730 Histidine kinase ATC04_RS10770 PF00072 Response regulator receiver domain ATC04_RS10770 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS10775 PF09334 tRNA synthetases class I (M) ATC04_RS10775 PF08264 Anticodon-binding domain of tRNA ATC04_RS10780 PF01936 NYN domain ATC04_RS10805 PF01527 Transposase ATC04_RS10810 PF13276 HTH-like domain ATC04_RS10810 PF00665 Integrase core domain ATC04_RS10810 PF13333 Integrase core domain ATC04_RS10820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATC04_RS10820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATC04_RS10820 PF01842 ACT domain ATC04_RS10825 PF00665 Integrase core domain ATC04_RS10835 PF13439 Glycosyltransferase Family 4 ATC04_RS10835 PF00534 Glycosyl transferases group 1 ATC04_RS10845 PF13614 AAA domain ATC04_RS10850 PF01451 Low molecular weight phosphotyrosine protein phosphatase ATC04_RS10880 PF18496 Collagenase G catalytic helper subdomain ATC04_RS10880 PF01752 Collagenase ATC04_RS10880 PF08453 Peptidase family M9 N-terminal ATC04_RS10900 PF01467 Cytidylyltransferase-like ATC04_RS10905 PF00072 Response regulator receiver domain ATC04_RS10905 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS10970 PF01943 Polysaccharide biosynthesis protein ATC04_RS10975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATC04_RS10985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ATC04_RS10990 PF16363 GDP-mannose 4,6 dehydratase ATC04_RS10995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATC04_RS10995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATC04_RS11000 PF02397 Bacterial sugar transferase ATC04_RS11005 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS11015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ATC04_RS11020 PF16363 GDP-mannose 4,6 dehydratase ATC04_RS11025 PF00483 Nucleotidyl transferase ATC04_RS11040 PF08241 Methyltransferase domain ATC04_RS11045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ATC04_RS11045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATC04_RS11050 PF10369 Small subunit of acetolactate synthase ATC04_RS11055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS11055 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS11055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS11060 PF00920 Dehydratase family ATC04_RS11070 PF13632 Glycosyl transferase family group 2 ATC04_RS11070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ATC04_RS11085 PF00563 EAL domain ATC04_RS11085 PF00990 Diguanylate cyclase, GGDEF domain ATC04_RS11085 PF03707 Bacterial signalling protein N terminal repeat ATC04_RS11095 PF00293 NUDIX domain ATC04_RS11100 PF01040 UbiA prenyltransferase family ATC04_RS11105 PF01040 UbiA prenyltransferase family ATC04_RS11115 PF01593 Flavin containing amine oxidoreductase ATC04_RS11125 PF00348 Polyprenyl synthetase ATC04_RS11140 PF13460 NAD(P)H-binding ATC04_RS11140 PF11066 Protein of unknown function (DUF2867) ATC04_RS11145 PF01047 MarR family ATC04_RS11155 PF00578 AhpC/TSA family ATC04_RS11185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATC04_RS11190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS11195 PF06039 Malate:quinone oxidoreductase (Mqo) ATC04_RS11210 PF00873 AcrB/AcrD/AcrF family ATC04_RS11230 PF02599 Global regulator protein family ATC04_RS11240 PF00771 FHIPEP family ATC04_RS11245 PF01312 FlhB HrpN YscU SpaS Family ATC04_RS11250 PF01311 Bacterial export proteins, family 1 ATC04_RS11255 PF01313 Bacterial export proteins, family 3 ATC04_RS11260 PF00813 FliP family ATC04_RS11270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ATC04_RS11280 PF00691 OmpA family ATC04_RS11280 PF13677 Membrane MotB of proton-channel complex MotA/MotB ATC04_RS11285 PF01618 MotA/TolQ/ExbB proton channel family ATC04_RS11295 PF07559 Flagellar basal body protein FlaE ATC04_RS11295 PF00460 Flagella basal body rod protein ATC04_RS11295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATC04_RS11300 PF13861 FlgD Tudor-like domain ATC04_RS11300 PF13860 FlgD Ig-like domain ATC04_RS11300 PF03963 Flagellar hook capping protein - N-terminal region ATC04_RS11310 PF00877 NlpC/P60 family ATC04_RS11320 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATC04_RS11320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATC04_RS11320 PF18269 T3SS EscN ATPase C-terminal domain ATC04_RS11335 PF08345 Flagellar M-ring protein C-terminal ATC04_RS11335 PF01514 Secretory protein of YscJ/FliF family ATC04_RS11340 PF02049 Flagellar hook-basal body complex protein FliE ATC04_RS11345 PF00460 Flagella basal body rod protein ATC04_RS11345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATC04_RS11350 PF00460 Flagella basal body rod protein ATC04_RS11365 PF07196 Flagellin hook IN motif ATC04_RS11365 PF07195 Flagellar hook-associated protein 2 C-terminus ATC04_RS11365 PF02465 Flagellar hook-associated protein 2 N-terminus ATC04_RS11370 PF00700 Bacterial flagellin C-terminal helical region ATC04_RS11370 PF00669 Bacterial flagellin N-terminal helical region ATC04_RS11375 PF04545 Sigma-70, region 4 ATC04_RS11375 PF04539 Sigma-70 region 3 ATC04_RS11375 PF04542 Sigma-70 region 2 ATC04_RS11385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ATC04_RS11385 PF00460 Flagella basal body rod protein ATC04_RS11390 PF00700 Bacterial flagellin C-terminal helical region ATC04_RS11390 PF00669 Bacterial flagellin N-terminal helical region ATC04_RS11395 PF02623 FliW protein ATC04_RS11405 PF01047 MarR family ATC04_RS11425 PF07690 Major Facilitator Superfamily ATC04_RS11430 PF00266 Aminotransferase class-V ATC04_RS11435 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATC04_RS11435 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ATC04_RS11440 PF02910 Fumarate reductase flavoprotein C-term ATC04_RS11440 PF00890 FAD binding domain ATC04_RS11445 PF02445 Quinolinate synthetase A protein ATC04_RS11470 PF00920 Dehydratase family ATC04_RS11485 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS11490 PF07729 FCD domain ATC04_RS11490 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS11495 PF00171 Aldehyde dehydrogenase family ATC04_RS11500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATC04_RS11510 PF13291 ACT domain ATC04_RS11510 PF02824 TGS domain ATC04_RS11510 PF04607 Region found in RelA / SpoT proteins ATC04_RS11515 PF00156 Phosphoribosyl transferase domain ATC04_RS11515 PF05139 Erythromycin esterase ATC04_RS11520 PF00005 ABC transporter ATC04_RS11535 PF07690 Major Facilitator Superfamily ATC04_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS11555 PF14785 Maltose transport system permease protein MalF P2 domain ATC04_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS11565 PF00128 Alpha amylase, catalytic domain ATC04_RS11570 PF00356 Bacterial regulatory proteins, lacI family ATC04_RS11575 PF00083 Sugar (and other) transporter ATC04_RS11590 PF13476 AAA domain ATC04_RS11595 PF00149 Calcineurin-like phosphoesterase ATC04_RS11595 PF12320 Type 5 capsule protein repressor C-terminal domain ATC04_RS11610 PF02811 PHP domain ATC04_RS11610 PF14480 DNA polymerase III polC-type N-terminus I ATC04_RS11610 PF11490 DNA polymerase III polC-type N-terminus II ATC04_RS11610 PF07733 Bacterial DNA polymerase III alpha NTPase domain ATC04_RS11610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ATC04_RS11610 PF14579 Helix-hairpin-helix motif ATC04_RS11610 PF00929 Exonuclease ATC04_RS11620 PF00005 ABC transporter ATC04_RS11645 PF01725 Ham1 family ATC04_RS11650 PF03725 3' exoribonuclease family, domain 2 ATC04_RS11650 PF01138 3' exoribonuclease family, domain 1 ATC04_RS11665 PF01227 GTP cyclohydrolase I ATC04_RS11670 PF14759 Reductase C-terminal ATC04_RS11670 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS11680 PF12706 Beta-lactamase superfamily domain ATC04_RS11685 PF01177 Asp/Glu/Hydantoin racemase ATC04_RS11695 PF02617 ATP-dependent Clp protease adaptor protein ClpS ATC04_RS11700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ATC04_RS11700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ATC04_RS11705 PF00857 Isochorismatase family ATC04_RS11720 PF01336 OB-fold nucleic acid binding domain ATC04_RS11720 PF09924 Uncharacterised conserved protein (DUF2156) ATC04_RS11720 PF16995 Transmembrane region of lysyl-tRNA synthetase ATC04_RS11720 PF00152 tRNA synthetases class II (D, K and N) ATC04_RS11725 PF04851 Type III restriction enzyme, res subunit ATC04_RS11745 PF00005 ABC transporter ATC04_RS11745 PF13732 Domain of unknown function (DUF4162) ATC04_RS11760 PF01594 AI-2E family transporter ATC04_RS11770 PF01939 Endonuclease NucS ATC04_RS11785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATC04_RS11790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATC04_RS11790 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATC04_RS11795 PF00231 ATP synthase ATC04_RS11800 PF02874 ATP synthase alpha/beta family, beta-barrel domain ATC04_RS11800 PF00306 ATP synthase alpha/beta chain, C terminal domain ATC04_RS11800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATC04_RS11805 PF00213 ATP synthase delta (OSCP) subunit ATC04_RS11810 PF00430 ATP synthase B/B' CF(0) ATC04_RS11815 PF00137 ATP synthase subunit C ATC04_RS11820 PF00119 ATP synthase A chain ATC04_RS11830 PF00953 Glycosyl transferase family 4 ATC04_RS11835 PF01300 Telomere recombination ATC04_RS11840 PF17827 PrmC N-terminal domain ATC04_RS11845 PF03462 PCRF domain ATC04_RS11845 PF00472 RF-1 domain ATC04_RS11850 PF07497 Rho termination factor, RNA-binding domain ATC04_RS11850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ATC04_RS11850 PF07498 Rho termination factor, N-terminal domain ATC04_RS11855 PF00288 GHMP kinases N terminal domain ATC04_RS11860 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS11865 PF01842 ACT domain ATC04_RS11865 PF00742 Homoserine dehydrogenase ATC04_RS11865 PF03447 Homoserine dehydrogenase, NAD binding domain ATC04_RS11870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ATC04_RS11870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ATC04_RS11875 PF05746 DALR anticodon binding domain ATC04_RS11875 PF03485 Arginyl tRNA synthetase N terminal domain ATC04_RS11875 PF00750 tRNA synthetases class I (R) ATC04_RS11885 PF00005 ABC transporter ATC04_RS11900 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ATC04_RS11900 PF11898 Domain of unknown function (DUF3418) ATC04_RS11900 PF04408 Helicase associated domain (HA2) ATC04_RS11900 PF00271 Helicase conserved C-terminal domain ATC04_RS11900 PF00270 DEAD/DEAH box helicase ATC04_RS11905 PF01230 HIT domain ATC04_RS11910 PF00581 Rhodanese-like domain ATC04_RS11915 PF00288 GHMP kinases N terminal domain ATC04_RS11915 PF08544 GHMP kinases C terminal ATC04_RS11940 PF00005 ABC transporter ATC04_RS11945 PF01595 Cyclin M transmembrane N-terminal domain ATC04_RS11945 PF03471 Transporter associated domain ATC04_RS11945 PF00571 CBS domain ATC04_RS11950 PF03471 Transporter associated domain ATC04_RS11950 PF00571 CBS domain ATC04_RS11950 PF01595 Cyclin M transmembrane N-terminal domain ATC04_RS11955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATC04_RS11955 PF16078 2-oxoglutarate dehydrogenase N-terminus ATC04_RS11955 PF00676 Dehydrogenase E1 component ATC04_RS11955 PF16870 2-oxoglutarate dehydrogenase C-terminal ATC04_RS11955 PF02779 Transketolase, pyrimidine binding domain ATC04_RS11970 PF08281 Sigma-70, region 4 ATC04_RS11970 PF04542 Sigma-70 region 2 ATC04_RS11975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ATC04_RS11980 PF03193 RsgA GTPase ATC04_RS11985 PF00459 Inositol monophosphatase family ATC04_RS11990 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATC04_RS11990 PF00950 ABC 3 transport family ATC04_RS11995 PF00582 Universal stress protein family ATC04_RS12000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATC04_RS12005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ATC04_RS12020 PF01668 SmpB protein ATC04_RS12025 PF01464 Transglycosylase SLT domain ATC04_RS12025 PF10145 Phage-related minor tail protein ATC04_RS12025 PF01551 Peptidase family M23 ATC04_RS12030 PF18075 FtsX extracellular domain ATC04_RS12030 PF02687 FtsX-like permease family ATC04_RS12035 PF00005 ABC transporter ATC04_RS12040 PF03462 PCRF domain ATC04_RS12040 PF00472 RF-1 domain ATC04_RS12140 PF02796 Helix-turn-helix domain of resolvase ATC04_RS12140 PF00239 Resolvase, N terminal domain ATC04_RS12160 PF14659 Phage integrase, N-terminal SAM-like domain ATC04_RS12160 PF00589 Phage integrase family ATC04_RS12170 PF00437 Type II/IV secretion system protein ATC04_RS12175 PF12538 DNA transporter ATC04_RS12175 PF01580 FtsK/SpoIIIE family ATC04_RS12185 PF02467 Transcription factor WhiB ATC04_RS12190 PF00069 Protein kinase domain ATC04_RS12190 PF03793 PASTA domain ATC04_RS12195 PF01474 Class-II DAHP synthetase family ATC04_RS12215 PF00501 AMP-binding enzyme ATC04_RS12225 PF02785 Biotin carboxylase C-terminal domain ATC04_RS12225 PF00289 Biotin carboxylase, N-terminal domain ATC04_RS12225 PF02436 Conserved carboxylase domain ATC04_RS12225 PF00364 Biotin-requiring enzyme ATC04_RS12225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATC04_RS12225 PF00682 HMGL-like ATC04_RS12230 PF13614 AAA domain ATC04_RS12235 PF13411 MerR HTH family regulatory protein ATC04_RS12240 PF02577 Bifunctional nuclease ATC04_RS12245 PF00376 MerR family regulatory protein ATC04_RS12250 PF00498 FHA domain ATC04_RS12255 PF04343 Protein of unknown function, DUF488 ATC04_RS12260 PF01494 FAD binding domain ATC04_RS12260 PF07976 Phenol hydroxylase, C-terminal dimerisation domain ATC04_RS12265 PF00005 ABC transporter ATC04_RS12275 PF02567 Phenazine biosynthesis-like protein ATC04_RS12285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ATC04_RS12285 PF01926 50S ribosome-binding GTPase ATC04_RS12290 PF02224 Cytidylate kinase ATC04_RS12295 PF02153 Prephenate dehydrogenase ATC04_RS12300 PF00849 RNA pseudouridylate synthase ATC04_RS12300 PF01479 S4 domain ATC04_RS12305 PF04079 Segregation and condensation complex subunit ScpB ATC04_RS12310 PF02616 Segregation and condensation protein ScpA ATC04_RS12315 PF13614 AAA domain ATC04_RS12325 PF00375 Sodium:dicarboxylate symporter family ATC04_RS12330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ATC04_RS12330 PF17203 Single cache domain 3 ATC04_RS12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS12335 PF00072 Response regulator receiver domain ATC04_RS12335 PF04703 FaeA-like protein ATC04_RS12345 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS12345 PF00501 AMP-binding enzyme ATC04_RS12345 PF16177 Acetyl-coenzyme A synthetase N-terminus ATC04_RS12350 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS12350 PF07729 FCD domain ATC04_RS12355 PF03972 MmgE/PrpD family ATC04_RS12365 PF00285 Citrate synthase, C-terminal domain ATC04_RS12375 PF13443 Cro/C1-type HTH DNA-binding domain ATC04_RS12380 PF00293 NUDIX domain ATC04_RS12385 PF02899 Phage integrase, N-terminal SAM-like domain ATC04_RS12385 PF00589 Phage integrase family ATC04_RS12390 PF00293 NUDIX domain ATC04_RS12395 PF06418 CTP synthase N-terminus ATC04_RS12395 PF00117 Glutamine amidotransferase class-I ATC04_RS12400 PF02463 RecF/RecN/SMC N terminal domain ATC04_RS12405 PF01513 ATP-NAD kinase ATC04_RS12410 PF01479 S4 domain ATC04_RS12410 PF01728 FtsJ-like methyltransferase ATC04_RS12420 PF13344 Haloacid dehalogenase-like hydrolase ATC04_RS12420 PF18407 GCN5-related N-acetyltransferase like domain ATC04_RS12450 PF00579 tRNA synthetases class I (W and Y) ATC04_RS12460 PF00156 Phosphoribosyl transferase domain ATC04_RS12470 PF00206 Lyase ATC04_RS12470 PF14698 Argininosuccinate lyase C-terminal ATC04_RS12475 PF01661 Macro domain ATC04_RS12480 PF01316 Arginine repressor, DNA binding domain ATC04_RS12480 PF02863 Arginine repressor, C-terminal domain ATC04_RS12485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATC04_RS12485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ATC04_RS12490 PF00202 Aminotransferase class-III ATC04_RS12495 PF00696 Amino acid kinase family ATC04_RS12500 PF01960 ArgJ family ATC04_RS12505 PF01118 Semialdehyde dehydrogenase, NAD binding domain ATC04_RS12505 PF02774 Semialdehyde dehydrogenase, dimerisation domain ATC04_RS12510 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS12510 PF00107 Zinc-binding dehydrogenase ATC04_RS12540 PF00156 Phosphoribosyl transferase domain ATC04_RS12550 PF08003 Protein of unknown function (DUF1698) ATC04_RS12555 PF03483 B3/4 domain ATC04_RS12555 PF03147 Ferredoxin-fold anticodon binding domain ATC04_RS12555 PF01588 Putative tRNA binding domain ATC04_RS12555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ATC04_RS12555 PF03484 tRNA synthetase B5 domain ATC04_RS12560 PF01409 tRNA synthetases class II core domain (F) ATC04_RS12560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ATC04_RS12570 PF00293 NUDIX domain ATC04_RS12575 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATC04_RS12575 PF00588 SpoU rRNA Methylase family ATC04_RS12580 PF00453 Ribosomal protein L20 ATC04_RS12585 PF01632 Ribosomal protein L35 ATC04_RS12590 PF00707 Translation initiation factor IF-3, C-terminal domain ATC04_RS12590 PF05198 Translation initiation factor IF-3, N-terminal domain ATC04_RS12610 PF00977 Histidine biosynthesis protein ATC04_RS12615 PF00117 Glutamine amidotransferase class-I ATC04_RS12620 PF00475 Imidazoleglycerol-phosphate dehydratase ATC04_RS12625 PF00155 Aminotransferase class I and II ATC04_RS12635 PF01726 LexA DNA binding domain ATC04_RS12635 PF00717 Peptidase S24-like ATC04_RS12640 PF13307 Helicase C-terminal domain ATC04_RS12645 PF13167 GTP-binding GTPase N-terminal ATC04_RS12645 PF16360 GTP-binding GTPase Middle Region ATC04_RS12645 PF01926 50S ribosome-binding GTPase ATC04_RS12650 PF05175 Methyltransferase small domain ATC04_RS12650 PF08468 Methyltransferase small domain N-terminal ATC04_RS12655 PF01678 Diaminopimelate epimerase ATC04_RS12665 PF00919 Uncharacterized protein family UPF0004 ATC04_RS12665 PF01938 TRAM domain ATC04_RS12665 PF04055 Radical SAM superfamily ATC04_RS12670 PF02631 RecX family ATC04_RS12675 PF00154 recA bacterial DNA recombination protein ATC04_RS12690 PF18146 Damage-inducible protein CinA KH domain ATC04_RS12690 PF00994 Probable molybdopterin binding domain ATC04_RS12690 PF02464 Competence-damaged protein ATC04_RS12695 PF01066 CDP-alcohol phosphatidyltransferase ATC04_RS12700 PF17854 FtsK alpha domain ATC04_RS12700 PF09397 Ftsk gamma domain ATC04_RS12700 PF01580 FtsK/SpoIIIE family ATC04_RS12710 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS12715 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS12720 PF00571 CBS domain ATC04_RS12720 PF00005 ABC transporter ATC04_RS12725 PF05154 TM2 domain ATC04_RS12745 PF12706 Beta-lactamase superfamily domain ATC04_RS12745 PF17770 Ribonuclease J C-terminal domain ATC04_RS12745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ATC04_RS12750 PF00701 Dihydrodipicolinate synthetase family ATC04_RS12765 PF01113 Dihydrodipicolinate reductase, N-terminus ATC04_RS12765 PF05173 Dihydrodipicolinate reductase, C-terminus ATC04_RS12775 PF12697 Alpha/beta hydrolase family ATC04_RS12780 PF00675 Insulinase (Peptidase family M16) ATC04_RS12780 PF05193 Peptidase M16 inactive domain ATC04_RS12795 PF00890 FAD binding domain ATC04_RS12800 PF00107 Zinc-binding dehydrogenase ATC04_RS12800 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS12810 PF00890 FAD binding domain ATC04_RS12820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATC04_RS12820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATC04_RS12825 PF03435 Saccharopine dehydrogenase NADP binding domain ATC04_RS12825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ATC04_RS12825 PF08501 Shikimate dehydrogenase substrate binding domain ATC04_RS12830 PF07690 Major Facilitator Superfamily ATC04_RS12830 PF00083 Sugar (and other) transporter ATC04_RS12835 PF03466 LysR substrate binding domain ATC04_RS12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS12840 PF00890 FAD binding domain ATC04_RS12845 PF00149 Calcineurin-like phosphoesterase ATC04_RS12860 PF02664 S-Ribosylhomocysteinase (LuxS) ATC04_RS12885 PF10011 Predicted membrane protein (DUF2254) ATC04_RS12900 PF00575 S1 RNA binding domain ATC04_RS12900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ATC04_RS12900 PF01138 3' exoribonuclease family, domain 1 ATC04_RS12900 PF00013 KH domain ATC04_RS12905 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS12905 PF07729 FCD domain ATC04_RS12910 PF07690 Major Facilitator Superfamily ATC04_RS12915 PF07690 Major Facilitator Superfamily ATC04_RS12920 PF01614 Bacterial transcriptional regulator ATC04_RS12920 PF09339 IclR helix-turn-helix domain ATC04_RS12925 PF00175 Oxidoreductase NAD-binding domain ATC04_RS12925 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS12925 PF00970 Oxidoreductase FAD-binding domain ATC04_RS12930 PF00067 Cytochrome P450 ATC04_RS12945 PF12706 Beta-lactamase superfamily domain ATC04_RS12950 PF00171 Aldehyde dehydrogenase family ATC04_RS12960 PF08279 HTH domain ATC04_RS12960 PF00072 Response regulator receiver domain ATC04_RS12965 PF00989 PAS fold ATC04_RS12965 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ATC04_RS12965 PF17203 Single cache domain 3 ATC04_RS12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS12980 PF01970 Tripartite tricarboxylate transporter TctA family ATC04_RS12985 PF00582 Universal stress protein family ATC04_RS12995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ATC04_RS12995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ATC04_RS13000 PF00501 AMP-binding enzyme ATC04_RS13005 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ATC04_RS13020 PF17676 LD-carboxypeptidase C-terminal domain ATC04_RS13020 PF02016 LD-carboxypeptidase N-terminal domain ATC04_RS13025 PF00266 Aminotransferase class-V ATC04_RS13040 PF00312 Ribosomal protein S15 ATC04_RS13050 PF01687 Riboflavin kinase ATC04_RS13050 PF06574 FAD synthetase ATC04_RS13065 PF09142 tRNA Pseudouridine synthase II, C terminal ATC04_RS13065 PF01509 TruB family pseudouridylate synthase (N terminal domain) ATC04_RS13065 PF16198 tRNA pseudouridylate synthase B C-terminal domain ATC04_RS13080 PF01546 Peptidase family M20/M25/M40 ATC04_RS13080 PF07687 Peptidase dimerisation domain ATC04_RS13085 PF07690 Major Facilitator Superfamily ATC04_RS13090 PF00474 Sodium:solute symporter family ATC04_RS13095 PF02469 Fasciclin domain ATC04_RS13100 PF04542 Sigma-70 region 2 ATC04_RS13100 PF04545 Sigma-70, region 4 ATC04_RS13105 PF10099 Anti-sigma-K factor rskA ATC04_RS13110 PF00174 Oxidoreductase molybdopterin binding domain ATC04_RS13115 PF02033 Ribosome-binding factor A ATC04_RS13120 PF04760 Translation initiation factor IF-2, N-terminal region ATC04_RS13120 PF11987 Translation-initiation factor 2 ATC04_RS13120 PF00009 Elongation factor Tu GTP binding domain ATC04_RS13125 PF08529 NusA N-terminal domain ATC04_RS13125 PF13184 NusA-like KH domain ATC04_RS13130 PF17384 RimP C-terminal SH3 domain ATC04_RS13130 PF02576 RimP N-terminal domain ATC04_RS13145 PF03631 Virulence factor BrkB ATC04_RS13155 PF07730 Histidine kinase ATC04_RS13160 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS13160 PF00072 Response regulator receiver domain ATC04_RS13165 PF01925 Sulfite exporter TauE/SafE ATC04_RS13170 PF04073 Aminoacyl-tRNA editing domain ATC04_RS13170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATC04_RS13170 PF03129 Anticodon binding domain ATC04_RS13200 PF04551 GcpE protein ATC04_RS13205 PF03358 NADPH-dependent FMN reductase ATC04_RS13210 PF03462 PCRF domain ATC04_RS13210 PF00472 RF-1 domain ATC04_RS13220 PF02163 Peptidase family M50 ATC04_RS13220 PF17820 PDZ domain ATC04_RS13225 PF13288 DXP reductoisomerase C-terminal domain ATC04_RS13225 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ATC04_RS13225 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ATC04_RS13230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS13230 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS13230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS13245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS13245 PF00005 ABC transporter ATC04_RS13250 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13250 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS13255 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS13265 PF00005 ABC transporter ATC04_RS13270 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13270 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS13275 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS13285 PF00364 Biotin-requiring enzyme ATC04_RS13285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ATC04_RS13285 PF02817 e3 binding domain ATC04_RS13290 PF02779 Transketolase, pyrimidine binding domain ATC04_RS13290 PF02780 Transketolase, C-terminal domain ATC04_RS13295 PF00676 Dehydrogenase E1 component ATC04_RS13305 PF00535 Glycosyl transferase family 2 ATC04_RS13310 PF07478 D-ala D-ala ligase C-terminus ATC04_RS13310 PF01820 D-ala D-ala ligase N-terminus ATC04_RS13315 PF02585 GlcNAc-PI de-N-acetylase ATC04_RS13320 PF00474 Sodium:solute symporter family ATC04_RS13330 PF06580 Histidine kinase ATC04_RS13330 PF07694 5TMR of 5TMR-LYT ATC04_RS13335 PF04397 LytTr DNA-binding domain ATC04_RS13335 PF00072 Response regulator receiver domain ATC04_RS13345 PF00474 Sodium:solute symporter family ATC04_RS13360 PF01765 Ribosome recycling factor ATC04_RS13365 PF00696 Amino acid kinase family ATC04_RS13370 PF00889 Elongation factor TS ATC04_RS13375 PF00318 Ribosomal protein S2 ATC04_RS13390 PF00534 Glycosyl transferases group 1 ATC04_RS13390 PF13439 Glycosyltransferase Family 4 ATC04_RS13410 PF13579 Glycosyl transferase 4-like domain ATC04_RS13410 PF00534 Glycosyl transferases group 1 ATC04_RS13420 PF00282 Pyridoxal-dependent decarboxylase conserved domain ATC04_RS13425 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ATC04_RS13430 PF04183 IucA / IucC family ATC04_RS13430 PF06276 Ferric iron reductase FhuF-like transporter ATC04_RS13440 PF03551 Transcriptional regulator PadR-like family ATC04_RS13450 PF00005 ABC transporter ATC04_RS13450 PF13732 Domain of unknown function (DUF4162) ATC04_RS13475 PF13662 Toprim domain ATC04_RS13475 PF10410 DnaB-helicase binding domain of primase ATC04_RS13475 PF08275 DNA primase catalytic core, N-terminal domain ATC04_RS13475 PF01807 CHC2 zinc finger ATC04_RS13475 PF08278 DNA primase DnaG DnaB-binding ATC04_RS13480 PF01966 HD domain ATC04_RS13480 PF13286 Phosphohydrolase-associated domain ATC04_RS13485 PF01207 Dihydrouridine synthase (Dus) ATC04_RS13525 PF03129 Anticodon binding domain ATC04_RS13525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ATC04_RS13545 PF13472 GDSL-like Lipase/Acylhydrolase family ATC04_RS13550 PF00561 alpha/beta hydrolase fold ATC04_RS13555 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS13585 PF08220 DeoR-like helix-turn-helix domain ATC04_RS13585 PF00455 DeoR C terminal sensor domain ATC04_RS13590 PF03932 CutC family ATC04_RS13595 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13605 PF01547 Bacterial extracellular solute-binding protein ATC04_RS13610 PF01116 Fructose-bisphosphate aldolase class-II ATC04_RS13615 PF00294 pfkB family carbohydrate kinase ATC04_RS13630 PF08534 Redoxin ATC04_RS13635 PF01979 Amidohydrolase family ATC04_RS13640 PF01979 Amidohydrolase family ATC04_RS13645 PF01546 Peptidase family M20/M25/M40 ATC04_RS13650 PF07670 Nucleoside recognition ATC04_RS13655 PF01175 Urocanase Rossmann-like domain ATC04_RS13655 PF17391 Urocanase N-terminal domain ATC04_RS13655 PF17392 Urocanase C-terminal domain ATC04_RS13670 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13675 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13680 PF01547 Bacterial extracellular solute-binding protein ATC04_RS13690 PF00155 Aminotransferase class I and II ATC04_RS13695 PF00107 Zinc-binding dehydrogenase ATC04_RS13695 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS13700 PF03466 LysR substrate binding domain ATC04_RS13700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS13705 PF07690 Major Facilitator Superfamily ATC04_RS13715 PF13419 Haloacid dehalogenase-like hydrolase ATC04_RS13720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ATC04_RS13720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ATC04_RS13725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS13725 PF00005 ABC transporter ATC04_RS13730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS13730 PF00005 ABC transporter ATC04_RS13735 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS13735 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13740 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS13745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS13750 PF00480 ROK family ATC04_RS13765 PF02934 GatB/GatE catalytic domain ATC04_RS13765 PF02637 GatB domain ATC04_RS13770 PF01425 Amidase ATC04_RS13775 PF02686 Glu-tRNAGln amidotransferase C subunit ATC04_RS13805 PF00933 Glycosyl hydrolase family 3 N terminal domain ATC04_RS13810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ATC04_RS13830 PF00459 Inositol monophosphatase family ATC04_RS13835 PF01653 NAD-dependent DNA ligase adenylation domain ATC04_RS13835 PF12826 Helix-hairpin-helix motif ATC04_RS13835 PF00533 BRCA1 C Terminus (BRCT) domain ATC04_RS13835 PF03120 NAD-dependent DNA ligase OB-fold domain ATC04_RS13835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ATC04_RS13845 PF16701 Adenylate cyclase regulatory domain ATC04_RS13845 PF00211 Adenylate and Guanylate cyclase catalytic domain ATC04_RS13860 PF00596 Class II Aldolase and Adducin N-terminal domain ATC04_RS13865 PF01039 Carboxyl transferase domain ATC04_RS13880 PF07690 Major Facilitator Superfamily ATC04_RS13890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ATC04_RS13900 PF00375 Sodium:dicarboxylate symporter family ATC04_RS13915 PF03176 MMPL family ATC04_RS13920 PF02545 Maf-like protein ATC04_RS13935 PF03738 Glutathionylspermidine synthase preATP-grasp ATC04_RS13945 PF02785 Biotin carboxylase C-terminal domain ATC04_RS13945 PF00364 Biotin-requiring enzyme ATC04_RS13945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATC04_RS13945 PF00289 Biotin carboxylase, N-terminal domain ATC04_RS13970 PF00083 Sugar (and other) transporter ATC04_RS13970 PF07690 Major Facilitator Superfamily ATC04_RS13975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATC04_RS13975 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS13980 PF01048 Phosphorylase superfamily ATC04_RS13985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATC04_RS13985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATC04_RS13985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATC04_RS13985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATC04_RS13990 PF01791 DeoC/LacD family aldolase ATC04_RS14000 PF00403 Heavy-metal-associated domain ATC04_RS14010 PF17757 UvrB interaction domain ATC04_RS14010 PF00271 Helicase conserved C-terminal domain ATC04_RS14010 PF00270 DEAD/DEAH box helicase ATC04_RS14010 PF02559 CarD-like/TRCF domain ATC04_RS14010 PF03461 TRCF domain ATC04_RS14020 PF06965 Na+/H+ antiporter 1 ATC04_RS14025 PF01592 NifU-like N terminal domain ATC04_RS14030 PF00266 Aminotransferase class-V ATC04_RS14035 PF00990 Diguanylate cyclase, GGDEF domain ATC04_RS14040 PF01195 Peptidyl-tRNA hydrolase ATC04_RS14045 PF01386 Ribosomal L25p family ATC04_RS14045 PF14693 Ribosomal protein TL5, C-terminal domain ATC04_RS14055 PF14572 Phosphoribosyl synthetase-associated domain ATC04_RS14055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ATC04_RS14060 PF12804 MobA-like NTP transferase domain ATC04_RS14060 PF00132 Bacterial transferase hexapeptide (six repeats) ATC04_RS14070 PF12848 ABC transporter ATC04_RS14070 PF16326 ABC transporter C-terminal domain ATC04_RS14070 PF00005 ABC transporter ATC04_RS14075 PF08713 DNA alkylation repair enzyme ATC04_RS14125 PF01266 FAD dependent oxidoreductase ATC04_RS14130 PF08544 GHMP kinases C terminal ATC04_RS14130 PF00288 GHMP kinases N terminal domain ATC04_RS14135 PF00398 Ribosomal RNA adenine dimethylase ATC04_RS14140 PF06737 Transglycosylase-like domain ATC04_RS14140 PF03990 G5-linked-Ubiquitin-like domain ATC04_RS14140 PF07501 G5 domain ATC04_RS14145 PF01026 TatD related DNase ATC04_RS14150 PF17863 AAA lid domain ATC04_RS14150 PF07726 ATPase family associated with various cellular activities (AAA) ATC04_RS14165 PF00171 Aldehyde dehydrogenase family ATC04_RS14170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ATC04_RS14175 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ATC04_RS14175 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase ATC04_RS14180 PF00501 AMP-binding enzyme ATC04_RS14215 PF02467 Transcription factor WhiB ATC04_RS14225 PF04138 GtrA-like protein ATC04_RS14230 PF02222 ATP-grasp domain ATC04_RS14230 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATC04_RS14235 PF00731 AIR carboxylase ATC04_RS14240 PF03816 Cell envelope-related transcriptional attenuator domain ATC04_RS14245 PF01238 Phosphomannose isomerase type I ATC04_RS14250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ATC04_RS14260 PF00484 Carbonic anhydrase ATC04_RS14265 PF10415 Fumarase C C-terminus ATC04_RS14265 PF00206 Lyase ATC04_RS14290 PF07690 Major Facilitator Superfamily ATC04_RS14295 PF00293 NUDIX domain ATC04_RS14310 PF02562 PhoH-like protein ATC04_RS14310 PF13638 PIN domain ATC04_RS14315 PF01255 Putative undecaprenyl diphosphate synthase ATC04_RS14320 PF03190 Protein of unknown function, DUF255 ATC04_RS14330 PF02585 GlcNAc-PI de-N-acetylase ATC04_RS14340 PF01272 Transcription elongation factor, GreA/GreB, C-term ATC04_RS14340 PF03449 Transcription elongation factor, N-terminal ATC04_RS14345 PF13291 ACT domain ATC04_RS14345 PF00291 Pyridoxal-phosphate dependent enzyme ATC04_RS14350 PF01594 AI-2E family transporter ATC04_RS14370 PF01527 Transposase ATC04_RS14375 PF13276 HTH-like domain ATC04_RS14375 PF13333 Integrase core domain ATC04_RS14375 PF00665 Integrase core domain ATC04_RS14380 PF02899 Phage integrase, N-terminal SAM-like domain ATC04_RS14380 PF00589 Phage integrase family ATC04_RS14395 PF05922 Peptidase inhibitor I9 ATC04_RS14395 PF00082 Subtilase family ATC04_RS14400 PF02541 Ppx/GppA phosphatase family ATC04_RS14415 PF00113 Enolase, C-terminal TIM barrel domain ATC04_RS14415 PF03952 Enolase, N-terminal domain ATC04_RS14420 PF03819 MazG nucleotide pyrophosphohydrolase domain ATC04_RS14425 PF00171 Aldehyde dehydrogenase family ATC04_RS14430 PF00962 Adenosine/AMP deaminase ATC04_RS14440 PF00591 Glycosyl transferase family, a/b domain ATC04_RS14440 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ATC04_RS14440 PF02885 Glycosyl transferase family, helical bundle domain ATC04_RS14445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ATC04_RS14450 PF02653 Branched-chain amino acid transport system / permease component ATC04_RS14455 PF02653 Branched-chain amino acid transport system / permease component ATC04_RS14460 PF00005 ABC transporter ATC04_RS14465 PF02608 ABC transporter substrate-binding protein PnrA-like ATC04_RS14470 PF04107 Glutamate-cysteine ligase family 2(GCS2) ATC04_RS14470 PF01546 Peptidase family M20/M25/M40 ATC04_RS14475 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS14480 PF01050 Mannose-6-phosphate isomerase ATC04_RS14480 PF00483 Nucleotidyl transferase ATC04_RS14485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ATC04_RS14495 PF00890 FAD binding domain ATC04_RS14495 PF02910 Fumarate reductase flavoprotein C-term ATC04_RS14500 PF13085 2Fe-2S iron-sulfur cluster binding domain ATC04_RS14510 PF00579 tRNA synthetases class I (W and Y) ATC04_RS14515 PF03372 Endonuclease/Exonuclease/phosphatase family ATC04_RS14540 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS14540 PF00072 Response regulator receiver domain ATC04_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS14550 PF03466 LysR substrate binding domain ATC04_RS14555 PF07690 Major Facilitator Superfamily ATC04_RS14555 PF00083 Sugar (and other) transporter ATC04_RS14585 PF03466 LysR substrate binding domain ATC04_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS14590 PF00067 Cytochrome P450 ATC04_RS14595 PF00111 2Fe-2S iron-sulfur cluster binding domain ATC04_RS14600 PF14759 Reductase C-terminal ATC04_RS14600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS14605 PF00083 Sugar (and other) transporter ATC04_RS14605 PF07690 Major Facilitator Superfamily ATC04_RS14610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ATC04_RS14610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ATC04_RS14615 PF00743 Flavin-binding monooxygenase-like ATC04_RS14625 PF00551 Formyl transferase ATC04_RS14630 PF00132 Bacterial transferase hexapeptide (six repeats) ATC04_RS14635 PF12833 Helix-turn-helix domain ATC04_RS14635 PF06445 GyrI-like small molecule binding domain ATC04_RS14650 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS14655 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS14660 PF03466 LysR substrate binding domain ATC04_RS14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS14670 PF01717 Cobalamin-independent synthase, Catalytic domain ATC04_RS14670 PF08267 Cobalamin-independent synthase, N-terminal domain ATC04_RS14680 PF00239 Resolvase, N terminal domain ATC04_RS14680 PF02796 Helix-turn-helix domain of resolvase ATC04_RS14695 PF02796 Helix-turn-helix domain of resolvase ATC04_RS14695 PF00239 Resolvase, N terminal domain ATC04_RS14700 PF03631 Virulence factor BrkB ATC04_RS14750 PF01022 Bacterial regulatory protein, arsR family ATC04_RS14765 PF03806 AbgT putative transporter family ATC04_RS14800 PF00394 Multicopper oxidase ATC04_RS14800 PF07731 Multicopper oxidase ATC04_RS14800 PF07732 Multicopper oxidase ATC04_RS14810 PF13411 MerR HTH family regulatory protein ATC04_RS14815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ATC04_RS14815 PF07992 Pyridine nucleotide-disulphide oxidoreductase ATC04_RS14820 PF02796 Helix-turn-helix domain of resolvase ATC04_RS14820 PF00239 Resolvase, N terminal domain ATC04_RS14825 PF02683 Cytochrome C biogenesis protein transmembrane region ATC04_RS14830 PF11798 IMS family HHH motif ATC04_RS14830 PF11799 impB/mucB/samB family C-terminal domain ATC04_RS14830 PF00817 impB/mucB/samB family ATC04_RS14830 PF13438 Domain of unknown function (DUF4113) ATC04_RS14835 PF02899 Phage integrase, N-terminal SAM-like domain ATC04_RS14835 PF00589 Phage integrase family ATC04_RS14845 PF07690 Major Facilitator Superfamily ATC04_RS14850 PF11798 IMS family HHH motif ATC04_RS14850 PF11799 impB/mucB/samB family C-terminal domain ATC04_RS14850 PF00817 impB/mucB/samB family ATC04_RS14850 PF13438 Domain of unknown function (DUF4113) ATC04_RS14865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATC04_RS14870 PF07729 FCD domain ATC04_RS14870 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS14875 PF01966 HD domain ATC04_RS14875 PF13286 Phosphohydrolase-associated domain ATC04_RS14885 PF03971 Monomeric isocitrate dehydrogenase ATC04_RS14895 PF07690 Major Facilitator Superfamily ATC04_RS14900 PF00199 Catalase ATC04_RS14900 PF18011 C-terminal domain found in long catalases ATC04_RS14900 PF06628 Catalase-related immune-responsive ATC04_RS14905 PF03746 LamB/YcsF family ATC04_RS14910 PF02626 Carboxyltransferase domain, subdomain A and B ATC04_RS14915 PF00289 Biotin carboxylase, N-terminal domain ATC04_RS14915 PF02785 Biotin carboxylase C-terminal domain ATC04_RS14915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ATC04_RS14915 PF00364 Biotin-requiring enzyme ATC04_RS14930 PF07729 FCD domain ATC04_RS14930 PF00392 Bacterial regulatory proteins, gntR family ATC04_RS14945 PF07286 Protein of unknown function (DUF1445) ATC04_RS14950 PF01566 Natural resistance-associated macrophage protein ATC04_RS14955 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS14960 PF01808 AICARFT/IMPCHase bienzyme ATC04_RS14960 PF02142 MGS-like domain ATC04_RS14970 PF07690 Major Facilitator Superfamily ATC04_RS14985 PF00106 short chain dehydrogenase ATC04_RS14990 PF00551 Formyl transferase ATC04_RS15005 PF03328 HpcH/HpaI aldolase/citrate lyase family ATC04_RS15010 PF01557 Fumarylacetoacetate (FAA) hydrolase family ATC04_RS15020 PF03301 Tryptophan 2,3-dioxygenase ATC04_RS15030 PF02515 CoA-transferase family III ATC04_RS15035 PF06737 Transglycosylase-like domain ATC04_RS15035 PF11574 Protein of unknown function (DUF3235) ATC04_RS15040 PF03631 Virulence factor BrkB ATC04_RS15085 PF02687 FtsX-like permease family ATC04_RS15085 PF12704 MacB-like periplasmic core domain ATC04_RS15090 PF12704 MacB-like periplasmic core domain ATC04_RS15090 PF02687 FtsX-like permease family ATC04_RS15090 PF00005 ABC transporter ATC04_RS15095 PF01545 Cation efflux family ATC04_RS15100 PF01022 Bacterial regulatory protein, arsR family ATC04_RS15105 PF03352 Methyladenine glycosylase ATC04_RS15105 PF13302 Acetyltransferase (GNAT) domain ATC04_RS15105 PF13673 Acetyltransferase (GNAT) domain ATC04_RS15105 PF00958 GMP synthase C terminal domain ATC04_RS15105 PF00117 Glutamine amidotransferase class-I ATC04_RS15110 PF08021 Siderophore-interacting FAD-binding domain ATC04_RS15110 PF04954 Siderophore-interacting protein ATC04_RS15130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATC04_RS15130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ATC04_RS15135 PF00171 Aldehyde dehydrogenase family ATC04_RS15140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS15140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS15140 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS15145 PF07905 Purine catabolism regulatory protein-like family ATC04_RS15145 PF13556 PucR C-terminal helix-turn-helix domain ATC04_RS15145 PF17853 GGDEF-like domain ATC04_RS15150 PF02515 CoA-transferase family III ATC04_RS15160 PF07690 Major Facilitator Superfamily ATC04_RS15165 PF01047 MarR family ATC04_RS15170 PF00459 Inositol monophosphatase family ATC04_RS15180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS15180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS15180 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS15185 PF00491 Arginase family ATC04_RS15190 PF00202 Aminotransferase class-III ATC04_RS15200 PF13520 Amino acid permease ATC04_RS15210 PF01381 Helix-turn-helix ATC04_RS15210 PF08671 Anti-repressor SinI ATC04_RS15235 PF00271 Helicase conserved C-terminal domain ATC04_RS15235 PF00176 SNF2 family N-terminal domain ATC04_RS15235 PF12419 SNF2 Helicase protein ATC04_RS15245 PF00549 CoA-ligase ATC04_RS15245 PF02629 CoA binding domain ATC04_RS15250 PF08442 ATP-grasp domain ATC04_RS15250 PF00549 CoA-ligase ATC04_RS15255 PF00580 UvrD/REP helicase N-terminal domain ATC04_RS15255 PF13361 UvrD-like helicase C-terminal domain ATC04_RS15275 PF00293 NUDIX domain ATC04_RS15275 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ATC04_RS15275 PF09297 NADH pyrophosphatase zinc ribbon domain ATC04_RS15285 PF00877 NlpC/P60 family ATC04_RS15290 PF01476 LysM domain ATC04_RS15290 PF08525 Opacity-associated protein A N-terminal motif ATC04_RS15290 PF01551 Peptidase family M23 ATC04_RS15295 PF02742 Iron dependent repressor, metal binding and dimerisation domain ATC04_RS15295 PF18357 Diphteria toxin repressor SH3 domain ATC04_RS15295 PF01325 Iron dependent repressor, N-terminal DNA binding domain ATC04_RS15300 PF00266 Aminotransferase class-V ATC04_RS15310 PF00313 'Cold-shock' DNA-binding domain ATC04_RS15320 PF00072 Response regulator receiver domain ATC04_RS15320 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS15325 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS15325 PF00672 HAMP domain ATC04_RS15345 PF00118 TCP-1/cpn60 chaperonin family ATC04_RS15360 PF03167 Uracil DNA glycosylase superfamily ATC04_RS15390 PF02384 N-6 DNA Methylase ATC04_RS15395 PF05661 Protein of unknown function (DUF808) ATC04_RS15410 PF00982 Glycosyltransferase family 20 ATC04_RS15415 PF02358 Trehalose-phosphatase ATC04_RS15415 PF03636 Glycosyl hydrolase family 65, N-terminal domain ATC04_RS15415 PF03632 Glycosyl hydrolase family 65 central catalytic domain ATC04_RS15415 PF03633 Glycosyl hydrolase family 65, C-terminal domain ATC04_RS15420 PF00005 ABC transporter ATC04_RS15420 PF17912 MalK OB fold domain ATC04_RS15460 PF02913 FAD linked oxidases, C-terminal domain ATC04_RS15460 PF01565 FAD binding domain ATC04_RS15480 PF08032 RNA 2'-O ribose methyltransferase substrate binding ATC04_RS15480 PF00588 SpoU rRNA Methylase family ATC04_RS15485 PF01406 tRNA synthetases class I (C) catalytic domain ATC04_RS15485 PF09190 DALR domain ATC04_RS15490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ATC04_RS15490 PF02542 YgbB family ATC04_RS15495 PF02559 CarD-like/TRCF domain ATC04_RS15505 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS15505 PF00072 Response regulator receiver domain ATC04_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS15510 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS15515 PF01895 PhoU domain ATC04_RS15525 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS15535 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS15540 PF02223 Thymidylate kinase ATC04_RS15545 PF12169 DNA polymerase III subunits gamma and tau domain III ATC04_RS15545 PF12170 DNA polymerase III tau subunit V interacting with alpha ATC04_RS15545 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ATC04_RS15550 PF00561 alpha/beta hydrolase fold ATC04_RS15655 PF01551 Peptidase family M23 ATC04_RS15655 PF08460 Bacterial SH3 domain ATC04_RS15670 PF00589 Phage integrase family ATC04_RS15670 PF02899 Phage integrase, N-terminal SAM-like domain ATC04_RS15675 PF00248 Aldo/keto reductase family ATC04_RS15695 PF05593 RHS Repeat ATC04_RS15715 PF02554 Carbon starvation protein CstA ATC04_RS15715 PF13722 5TM C-terminal transporter carbon starvation CstA ATC04_RS15720 PF00107 Zinc-binding dehydrogenase ATC04_RS15720 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS15735 PF00326 Prolyl oligopeptidase family ATC04_RS15735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ATC04_RS15750 PF00271 Helicase conserved C-terminal domain ATC04_RS15750 PF00270 DEAD/DEAH box helicase ATC04_RS15750 PF00570 HRDC domain ATC04_RS15750 PF16124 RecQ zinc-binding ATC04_RS15750 PF09382 RQC domain ATC04_RS15755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ATC04_RS15755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ATC04_RS15755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATC04_RS15755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ATC04_RS15765 PF02082 Transcriptional regulator ATC04_RS15770 PF00970 Oxidoreductase FAD-binding domain ATC04_RS15770 PF00042 Globin ATC04_RS15770 PF00175 Oxidoreductase NAD-binding domain ATC04_RS15775 PF12697 Alpha/beta hydrolase family ATC04_RS15785 PF07690 Major Facilitator Superfamily ATC04_RS15790 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ATC04_RS15790 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ATC04_RS15810 PF00356 Bacterial regulatory proteins, lacI family ATC04_RS15815 PF00232 Glycosyl hydrolase family 1 ATC04_RS15820 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS15825 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS15850 PF08361 MAATS-type transcriptional repressor, C-terminal region ATC04_RS15850 PF00440 Bacterial regulatory proteins, tetR family ATC04_RS15855 PF00005 ABC transporter ATC04_RS15855 PF03412 Peptidase C39 family ATC04_RS15855 PF00664 ABC transporter transmembrane region ATC04_RS15870 PF00072 Response regulator receiver domain ATC04_RS15870 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS15875 PF00072 Response regulator receiver domain ATC04_RS15875 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS15880 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS15880 PF00672 HAMP domain ATC04_RS15890 PF14437 MafB19-like deaminase ATC04_RS15900 PF04226 Transglycosylase associated protein ATC04_RS15915 PF00293 NUDIX domain ATC04_RS15920 PF07690 Major Facilitator Superfamily ATC04_RS15925 PF00384 Molybdopterin oxidoreductase ATC04_RS15925 PF01568 Molydopterin dinucleotide binding domain ATC04_RS15930 PF14711 Respiratory nitrate reductase beta C-terminal ATC04_RS15930 PF13247 4Fe-4S dicluster domain ATC04_RS15935 PF00384 Molybdopterin oxidoreductase ATC04_RS15935 PF02665 Nitrate reductase gamma subunit ATC04_RS15935 PF02613 Nitrate reductase delta subunit ATC04_RS15940 PF00384 Molybdopterin oxidoreductase ATC04_RS15940 PF02613 Nitrate reductase delta subunit ATC04_RS15940 PF02665 Nitrate reductase gamma subunit ATC04_RS15955 PF12804 MobA-like NTP transferase domain ATC04_RS15960 PF03454 MoeA C-terminal region (domain IV) ATC04_RS15960 PF00994 Probable molybdopterin binding domain ATC04_RS15960 PF03453 MoeA N-terminal region (domain I and II) ATC04_RS15965 PF00005 ABC transporter ATC04_RS15965 PF03459 TOBE domain ATC04_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS15980 PF04055 Radical SAM superfamily ATC04_RS15980 PF06463 Molybdenum Cofactor Synthesis C ATC04_RS15990 PF04978 Protein of unknown function (DUF664) ATC04_RS15995 PF13280 WYL domain ATC04_RS16000 PF02391 MoaE protein ATC04_RS16005 PF00581 Rhodanese-like domain ATC04_RS16005 PF00899 ThiF family ATC04_RS16015 PF03453 MoeA N-terminal region (domain I and II) ATC04_RS16015 PF00994 Probable molybdopterin binding domain ATC04_RS16015 PF03454 MoeA C-terminal region (domain IV) ATC04_RS16020 PF01967 MoaC family ATC04_RS16025 PF00994 Probable molybdopterin binding domain ATC04_RS16025 PF01967 MoaC family ATC04_RS16030 PF03009 Glycerophosphoryl diester phosphodiesterase family ATC04_RS16055 PF09339 IclR helix-turn-helix domain ATC04_RS16055 PF01614 Bacterial transcriptional regulator ATC04_RS16060 PF01144 Coenzyme A transferase ATC04_RS16065 PF01144 Coenzyme A transferase ATC04_RS16070 PF00108 Thiolase, N-terminal domain ATC04_RS16070 PF02803 Thiolase, C-terminal domain ATC04_RS16075 PF07690 Major Facilitator Superfamily ATC04_RS16085 PF01958 Domain of unknown function DUF108 ATC04_RS16085 PF03447 Homoserine dehydrogenase, NAD binding domain ATC04_RS16090 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS16095 PF01494 FAD binding domain ATC04_RS16100 PF00775 Dioxygenase ATC04_RS16100 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ATC04_RS16110 PF10397 Adenylosuccinate lyase C-terminus ATC04_RS16110 PF00206 Lyase ATC04_RS16120 PF02627 Carboxymuconolactone decarboxylase family ATC04_RS16145 PF00005 ABC transporter ATC04_RS16160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATC04_RS16160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ATC04_RS16160 PF01842 ACT domain ATC04_RS16165 PF03616 Sodium/glutamate symporter ATC04_RS16170 PF00491 Arginase family ATC04_RS16175 PF01614 Bacterial transcriptional regulator ATC04_RS16175 PF09339 IclR helix-turn-helix domain ATC04_RS16180 PF01569 PAP2 superfamily ATC04_RS16185 PF02590 Predicted SPOUT methyltransferase ATC04_RS16190 PF00271 Helicase conserved C-terminal domain ATC04_RS16190 PF08494 DEAD/H associated ATC04_RS16190 PF00270 DEAD/DEAH box helicase ATC04_RS16195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ATC04_RS16195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ATC04_RS16200 PF00849 RNA pseudouridylate synthase ATC04_RS16210 PF00106 short chain dehydrogenase ATC04_RS16215 PF07690 Major Facilitator Superfamily ATC04_RS16230 PF01702 Queuine tRNA-ribosyltransferase ATC04_RS16240 PF00005 ABC transporter ATC04_RS16265 PF08543 Phosphomethylpyrimidine kinase ATC04_RS16275 PF06280 Fn3-like domain ATC04_RS16275 PF00082 Subtilase family ATC04_RS16275 PF00746 LPXTG cell wall anchor motif ATC04_RS16275 PF02225 PA domain ATC04_RS16280 PF00933 Glycosyl hydrolase family 3 N terminal domain ATC04_RS16285 PF13438 Domain of unknown function (DUF4113) ATC04_RS16285 PF11799 impB/mucB/samB family C-terminal domain ATC04_RS16285 PF00817 impB/mucB/samB family ATC04_RS16300 PF01266 FAD dependent oxidoreductase ATC04_RS16310 PF00881 Nitroreductase family ATC04_RS16315 PF07730 Histidine kinase ATC04_RS16325 PF00196 Bacterial regulatory proteins, luxR family ATC04_RS16325 PF00072 Response regulator receiver domain ATC04_RS16330 PF07724 AAA domain (Cdc48 subfamily) ATC04_RS16330 PF17871 AAA lid domain ATC04_RS16330 PF10431 C-terminal, D2-small domain, of ClpB protein ATC04_RS16330 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS16330 PF02861 Clp amino terminal domain, pathogenicity island component ATC04_RS16355 PF07690 Major Facilitator Superfamily ATC04_RS16360 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ATC04_RS16370 PF01381 Helix-turn-helix ATC04_RS16390 PF00463 Isocitrate lyase family ATC04_RS16395 PF01274 Malate synthase ATC04_RS16405 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS16410 PF00324 Amino acid permease ATC04_RS16415 PF06912 Protein of unknown function (DUF1275) ATC04_RS16440 PF00072 Response regulator receiver domain ATC04_RS16440 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS16465 PF00749 tRNA synthetases class I (E and Q), catalytic domain ATC04_RS16470 PF12169 DNA polymerase III subunits gamma and tau domain III ATC04_RS16475 PF02132 RecR protein ATC04_RS16475 PF13662 Toprim domain ATC04_RS16480 PF07690 Major Facilitator Superfamily ATC04_RS16495 PF01842 ACT domain ATC04_RS16495 PF13840 ACT domain ATC04_RS16495 PF00696 Amino acid kinase family ATC04_RS16505 PF00072 Response regulator receiver domain ATC04_RS16505 PF12431 Transcriptional regulator ATC04_RS16510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ATC04_RS16510 PF17203 Single cache domain 3 ATC04_RS16510 PF00989 PAS fold ATC04_RS16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS16515 PF03600 Citrate transporter ATC04_RS16520 PF04978 Protein of unknown function (DUF664) ATC04_RS16535 PF00999 Sodium/hydrogen exchanger family ATC04_RS16540 PF05958 tRNA (Uracil-5-)-methyltransferase ATC04_RS16555 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ATC04_RS16565 PF00586 AIR synthase related protein, N-terminal domain ATC04_RS16565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ATC04_RS16565 PF02769 AIR synthase related protein, C-terminal domain ATC04_RS16580 PF03831 PhnA domain ATC04_RS16580 PF08274 PhnA Zinc-Ribbon ATC04_RS16590 PF00296 Luciferase-like monooxygenase ATC04_RS16620 PF00149 Calcineurin-like phosphoesterase ATC04_RS16620 PF02872 5'-nucleotidase, C-terminal domain ATC04_RS16620 PF17936 Bacterial Ig domain ATC04_RS16635 PF04237 YjbR ATC04_RS16640 PF13380 CoA binding domain ATC04_RS16645 PF00296 Luciferase-like monooxygenase ATC04_RS16650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS16650 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS16650 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS16655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ATC04_RS16655 PF00005 ABC transporter ATC04_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS16660 PF12911 N-terminal TM domain of oligopeptide transport permease C ATC04_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS16670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ATC04_RS16675 PF01126 Heme oxygenase ATC04_RS16680 PF05368 NmrA-like family ATC04_RS16685 PF04542 Sigma-70 region 2 ATC04_RS16685 PF04545 Sigma-70, region 4 ATC04_RS16710 PF00296 Luciferase-like monooxygenase ATC04_RS16720 PF00005 ABC transporter ATC04_RS16730 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS16735 PF16177 Acetyl-coenzyme A synthetase N-terminus ATC04_RS16735 PF13193 AMP-binding enzyme C-terminal domain ATC04_RS16735 PF00501 AMP-binding enzyme ATC04_RS16740 PF02028 BCCT, betaine/carnitine/choline family transporter ATC04_RS16745 PF01475 Ferric uptake regulator family ATC04_RS16750 PF00141 Peroxidase ATC04_RS16755 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ATC04_RS16755 PF02805 Metal binding domain of Ada ATC04_RS16755 PF12833 Helix-turn-helix domain ATC04_RS16755 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ATC04_RS16760 PF04545 Sigma-70, region 4 ATC04_RS16760 PF04542 Sigma-70 region 2 ATC04_RS16765 PF00300 Histidine phosphatase superfamily (branch 1) ATC04_RS16770 PF01053 Cys/Met metabolism PLP-dependent enzyme ATC04_RS16775 PF13380 CoA binding domain ATC04_RS16780 PF01497 Periplasmic binding protein ATC04_RS16785 PF01032 FecCD transport family ATC04_RS16790 PF01032 FecCD transport family ATC04_RS16795 PF01522 Polysaccharide deacetylase ATC04_RS16800 PF00455 DeoR C terminal sensor domain ATC04_RS16800 PF08220 DeoR-like helix-turn-helix domain ATC04_RS16805 PF00294 pfkB family carbohydrate kinase ATC04_RS16810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ATC04_RS16810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ATC04_RS16815 PF02896 PEP-utilising enzyme, TIM barrel domain ATC04_RS16815 PF00391 PEP-utilising enzyme, mobile domain ATC04_RS16815 PF05524 PEP-utilising enzyme, N-terminal ATC04_RS16830 PF13739 Deacetylase PdaC ATC04_RS16830 PF01522 Polysaccharide deacetylase ATC04_RS16830 PF11738 Protein of unknown function (DUF3298) ATC04_RS16850 PF00004 ATPase family associated with various cellular activities (AAA) ATC04_RS16850 PF06480 FtsH Extracellular ATC04_RS16850 PF01434 Peptidase family M41 ATC04_RS16850 PF17862 AAA+ lid domain ATC04_RS16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS16855 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS16865 PF00709 Adenylosuccinate synthetase ATC04_RS16880 PF00892 EamA-like transporter family ATC04_RS16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ATC04_RS16890 PF03466 LysR substrate binding domain ATC04_RS16895 PF01266 FAD dependent oxidoreductase ATC04_RS16900 PF01546 Peptidase family M20/M25/M40 ATC04_RS16915 PF00543 Nitrogen regulatory protein P-II ATC04_RS16920 PF00909 Ammonium Transporter Family ATC04_RS16925 PF07722 Peptidase C26 ATC04_RS16935 PF00265 Thymidine kinase ATC04_RS16945 PF00324 Amino acid permease ATC04_RS16950 PF00266 Aminotransferase class-V ATC04_RS16955 PF01037 Lrp/AsnC ligand binding domain ATC04_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATC04_RS16965 PF00512 His Kinase A (phospho-acceptor) domain ATC04_RS16965 PF18719 ArlS sensor domain ATC04_RS16970 PF00072 Response regulator receiver domain ATC04_RS16970 PF00486 Transcriptional regulatory protein, C terminal ATC04_RS17015 PF01580 FtsK/SpoIIIE family ATC04_RS17015 PF12538 DNA transporter ATC04_RS17020 PF00069 Protein kinase domain ATC04_RS17030 PF01116 Fructose-bisphosphate aldolase class-II ATC04_RS17035 PF01551 Peptidase family M23 ATC04_RS17040 PF00588 SpoU rRNA Methylase family ATC04_RS17040 PF02527 rRNA small subunit methyltransferase G ATC04_RS17045 PF13344 Haloacid dehalogenase-like hydrolase ATC04_RS17055 PF00005 ABC transporter ATC04_RS17070 PF00156 Phosphoribosyl transferase domain ATC04_RS17080 PF02540 NAD synthase ATC04_RS17100 PF02770 Acyl-CoA dehydrogenase, middle domain ATC04_RS17100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ATC04_RS17100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ATC04_RS17110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ATC04_RS17110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ATC04_RS17115 PF00378 Enoyl-CoA hydratase/isomerase ATC04_RS17155 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain ATC04_RS17155 PF00877 NlpC/P60 family ATC04_RS17160 PF00582 Universal stress protein family ATC04_RS17165 PF00860 Permease family ATC04_RS17190 PF01596 O-methyltransferase ATC04_RS17195 PF01910 Thiamine-binding protein ATC04_RS17215 PF02272 DHHA1 domain ATC04_RS17215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ATC04_RS17215 PF01411 tRNA synthetases class II (A) ATC04_RS17250 PF01565 FAD binding domain ATC04_RS17250 PF04030 D-arabinono-1,4-lactone oxidase ATC04_RS17260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ATC04_RS17260 PF00205 Thiamine pyrophosphate enzyme, central domain ATC04_RS17260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ATC04_RS17270 PF01370 NAD dependent epimerase/dehydratase family ATC04_RS17270 PF08338 Domain of unknown function (DUF1731) ATC04_RS17280 PF01475 Ferric uptake regulator family ATC04_RS17290 PF01565 FAD binding domain ATC04_RS17290 PF02913 FAD linked oxidases, C-terminal domain ATC04_RS17310 PF16123 Hydroxyacylglutathione hydrolase C-terminus ATC04_RS17310 PF00753 Metallo-beta-lactamase superfamily ATC04_RS17325 PF00085 Thioredoxin ATC04_RS17330 PF02583 Metal-sensitive transcriptional repressor ATC04_RS17335 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain ATC04_RS17335 PF01113 Dihydrodipicolinate reductase, N-terminus ATC04_RS17360 PF06441 Epoxide hydrolase N terminus ATC04_RS17370 PF08240 Alcohol dehydrogenase GroES-like domain ATC04_RS17370 PF00107 Zinc-binding dehydrogenase ATC04_RS17375 PF00171 Aldehyde dehydrogenase family ATC04_RS17395 PF01209 ubiE/COQ5 methyltransferase family ATC04_RS17400 PF12848 ABC transporter ATC04_RS17400 PF16326 ABC transporter C-terminal domain ATC04_RS17400 PF00005 ABC transporter ATC04_RS17420 PF00561 alpha/beta hydrolase fold ATC04_RS17450 PF01384 Phosphate transporter family ATC04_RS17465 PF00005 ABC transporter ATC04_RS17470 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component ATC04_RS17480 PF12849 PBP superfamily domain ATC04_RS17490 PF18073 Rubredoxin metal binding domain ATC04_RS17490 PF06745 KaiC ATC04_RS17495 PF10635 DisA bacterial checkpoint controller linker region ATC04_RS17495 PF00633 Helix-hairpin-helix motif ATC04_RS17495 PF02457 DisA bacterial checkpoint controller nucleotide-binding ATC04_RS17505 PF00633 Helix-hairpin-helix motif ATC04_RS17505 PF00730 HhH-GPD superfamily base excision DNA repair protein ATC04_RS17505 PF10576 Iron-sulfur binding domain of endonuclease III ATC04_RS17515 PF00583 Acetyltransferase (GNAT) family ATC04_RS17540 PF01510 N-acetylmuramoyl-L-alanine amidase ATC04_RS17540 PF01471 Putative peptidoglycan binding domain ATC04_RS17760 PF02796 Helix-turn-helix domain of resolvase ATC04_RS17760 PF00239 Resolvase, N terminal domain ATC04_RS17780 PF01471 Putative peptidoglycan binding domain ATC04_RS17780 PF01510 N-acetylmuramoyl-L-alanine amidase ATC04_RS17990 PF02569 Pantoate-beta-alanine ligase ATC04_RS18130 PF08543 Phosphomethylpyrimidine kinase ATC04_RS18130 PF02581 Thiamine monophosphate synthase ATC04_RS18130 PF03070 TENA/THI-4/PQQC family