locus-tag	class	description
MUG94_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MUG94_RS00010	COG0592	DNA-directed DNA polymerase activity
MUG94_RS00015	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
MUG94_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MUG94_RS00025	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
MUG94_RS00030	COG0187	DNA topoisomerase II activity
MUG94_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUG94_RS00040	COG3266	domain, Protein
MUG94_RS00075	COG0705	Rhomboid family
MUG94_RS00085	COG3764	Sortase (surface protein transpeptidase)
MUG94_RS00100	COG2815	serine threonine protein kinase
MUG94_RS00100	COG0515	serine threonine protein kinase
MUG94_RS00105	COG0515	serine threonine protein kinase
MUG94_RS00110	COG0768	penicillin binding
MUG94_RS00125	COG1716	ATPase activity
MUG94_RS00130	COG1716	ATPase activity
MUG94_RS00150	COG0346	lactoylglutathione lyase activity
MUG94_RS00165	COG2610	gluconate transmembrane transporter activity
MUG94_RS00170	COG3265	gluconokinase activity
MUG94_RS00175	COG2186	Transcriptional regulator
MUG94_RS00180	COG0783	Belongs to the Dps family
MUG94_RS00195	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS00215	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
MUG94_RS00225	COG0789	Transcriptional regulator
MUG94_RS00245	COG0702	epimerase
MUG94_RS00265	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS00270	COG1609	Transcriptional regulator
MUG94_RS00300	COG0561	phosphatase activity
MUG94_RS00305	COG0671	phosphoesterase, PA-phosphatase related
MUG94_RS00310	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
MUG94_RS00315	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
MUG94_RS00320	COG0584	glycerophosphoryl diester phosphodiesterase
MUG94_RS00325	COG1929	Belongs to the glycerate kinase type-1 family
MUG94_RS00330	COG2233	PERMEase
MUG94_RS00335	COG0300	oxidoreductase activity
MUG94_RS00340	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS00345	COG0033	Phosphoglucomutase
MUG94_RS00350	COG3104	oligopeptide transport
MUG94_RS00360	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUG94_RS00380	COG1597	lipid kinase activity
MUG94_RS00385	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MUG94_RS00390	COG0561	phosphatase activity
MUG94_RS00405	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
MUG94_RS00410	COG2027	D-alanyl-D-alanine carboxypeptidase
MUG94_RS00420	COG0037	tRNA processing
MUG94_RS00430	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUG94_RS00435	COG0302	gtp cyclohydrolase
MUG94_RS00445	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MUG94_RS00450	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MUG94_RS00475	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
MUG94_RS00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MUG94_RS00500	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
MUG94_RS00505	COG3237	CsbD-like
MUG94_RS00510	COG2376	Dihydroxyacetone kinase
MUG94_RS00515	COG1461	Dihydroxyacetone kinase
MUG94_RS00525	COG1194	a g-specific adenine glycosylase
MUG94_RS00535	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
MUG94_RS00565	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUG94_RS00570	COG0306	phosphate transporter
MUG94_RS00630	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUG94_RS00635	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUG94_RS00635	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUG94_RS00635	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUG94_RS00640	COG1105	Belongs to the carbohydrate kinase PfkB family
MUG94_RS00660	COG2733	membrane
MUG94_RS00665	COG3387	PFAM Glycoside hydrolase 15-related
MUG94_RS00690	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MUG94_RS00695	COG0857	belongs to the CobB CobQ family
MUG94_RS00695	COG0280	phosphate acetyltransferase
MUG94_RS00700	COG0531	amino acid
MUG94_RS00715	COG2252	PERMEase
MUG94_RS00795	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MUG94_RS00800	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUG94_RS00815	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUG94_RS00815	COG0357	Ribosomal RNA small subunit methyltransferase G
MUG94_RS00820	COG0191	fructose-bisphosphate aldolase activity
MUG94_RS00850	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MUG94_RS00870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MUG94_RS00885	COG1832	CoA-binding protein
MUG94_RS00900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUG94_RS00905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS00915	COG1116	anion transmembrane transporter activity
MUG94_RS00940	COG2315	Protein conserved in bacteria
MUG94_RS00960	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUG94_RS00965	COG0047	phosphoribosylformylglycinamidine synthase activity
MUG94_RS00970	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUG94_RS01005	COG1846	Transcriptional regulator
MUG94_RS01025	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MUG94_RS01065	COG0191	fructose-bisphosphate aldolase activity
MUG94_RS01075	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MUG94_RS01080	COG1349	DNA-binding transcription factor activity
MUG94_RS01085	COG0673	inositol 2-dehydrogenase activity
MUG94_RS01095	COG1175	transmembrane transport
MUG94_RS01100	COG0395	ABC-type sugar transport system, permease component
MUG94_RS01115	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUG94_RS01120	COG3548	integral membrane protein
MUG94_RS01220	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS01270	COG3321	synthase
MUG94_RS01270	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS01270	COG0604	alcohol dehydrogenase
MUG94_RS01290	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS01295	COG0366	Alpha amylase catalytic
MUG94_RS01310	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUG94_RS01315	COG1120	ATPase activity
MUG94_RS01330	COG0583	DNA-binding transcription factor activity
MUG94_RS01360	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUG94_RS01370	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUG94_RS01380	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUG94_RS01390	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS01395	COG1129	ABC transporter
MUG94_RS01415	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
MUG94_RS01425	COG1396	sequence-specific DNA binding
MUG94_RS01430	COG0024	Methionine aminopeptidase
MUG94_RS01435	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUG94_RS01440	COG1404	Belongs to the peptidase S8 family
MUG94_RS01445	COG2801	Transposase and inactivated derivatives
MUG94_RS01455	COG2814	Major facilitator Superfamily
MUG94_RS01465	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MUG94_RS01475	COG3384	dioxygenase
MUG94_RS01485	COG0402	S-adenosylhomocysteine deaminase activity
MUG94_RS01495	COG0351	phosphomethylpyrimidine kinase
MUG94_RS01515	COG0343	queuine tRNA-ribosyltransferase activity
MUG94_RS01555	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS01580	COG0564	pseudouridine synthase activity
MUG94_RS01590	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUG94_RS01595	COG1201	RNA secondary structure unwinding
MUG94_RS01610	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MUG94_RS01635	COG2354	Protein conserved in bacteria
MUG94_RS01670	COG4589	Belongs to the CDS family
MUG94_RS01690	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MUG94_RS01700	COG2062	phosphohistidine phosphatase, SixA
MUG94_RS01705	COG1511	domain protein
MUG94_RS01730	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
MUG94_RS01745	COG0514	ATP-dependent DNA helicase (RecQ)
MUG94_RS01755	COG1024	Enoyl-CoA hydratase
MUG94_RS01765	COG0667	Aldo Keto reductase
MUG94_RS01775	COG1505	serine-type exopeptidase activity
MUG94_RS01805	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MUG94_RS01820	COG0604	alcohol dehydrogenase
MUG94_RS01825	COG1966	Carbon starvation protein
MUG94_RS01850	COG0656	L-ascorbic acid biosynthetic process
MUG94_RS01855	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
MUG94_RS01860	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
MUG94_RS01865	COG1256	bacterial-type flagellum assembly
MUG94_RS01865	COG4786	Flagellar basal body rod
MUG94_RS01880	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
MUG94_RS01885	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
MUG94_RS01900	COG1815	bacterial-type flagellum-dependent cell motility
MUG94_RS01905	COG1558	bacterial-type flagellum-dependent cell motility
MUG94_RS01910	COG1677	Flagellar hook-basal body complex protein FliE
MUG94_RS01915	COG1766	The M ring may be actively involved in energy transduction
MUG94_RS01920	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
MUG94_RS01930	COG1157	protein secretion by the type III secretion system
MUG94_RS01950	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
MUG94_RS01965	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
MUG94_RS01970	COG1360	Flagellar Motor Protein
MUG94_RS01980	COG1776	CheC inhibitor of MCP methylation
MUG94_RS01980	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
MUG94_RS01990	COG1338	Plays a role in the flagellum-specific transport system
MUG94_RS02005	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
MUG94_RS02010	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
MUG94_RS02020	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
MUG94_RS02035	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MUG94_RS02040	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MUG94_RS02060	COG0588	phosphoglycerate mutase activity
MUG94_RS02070	COG5002	protein histidine kinase activity
MUG94_RS02090	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
MUG94_RS02095	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
MUG94_RS02100	COG0215	cysteine-tRNA ligase activity
MUG94_RS02105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUG94_RS02120	COG0366	Alpha amylase catalytic
MUG94_RS02125	COG0366	Alpha amylase catalytic
MUG94_RS02130	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
MUG94_RS02175	COG0277	FAD linked oxidase domain protein
MUG94_RS02180	COG0366	Alpha amylase catalytic
MUG94_RS02190	COG3842	ATPase activity
MUG94_RS02200	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
MUG94_RS02215	COG1301	dicarboxylic acid transport
MUG94_RS02245	COG1940	carbohydrate kinase activity
MUG94_RS02270	COG3621	Patatin-like phospholipase
MUG94_RS02280	COG1595	DNA-templated transcription, initiation
MUG94_RS02355	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS02380	COG1609	Transcriptional regulator
MUG94_RS02385	COG0366	Alpha amylase catalytic
MUG94_RS02395	COG1175	transmembrane transport
MUG94_RS02400	COG3833	ABC-type maltose transport systems, permease component
MUG94_RS02405	COG0667	Aldo Keto reductase
MUG94_RS02440	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MUG94_RS02460	COG0459	protein refolding
MUG94_RS02470	COG2205	protein histidine kinase activity
MUG94_RS02475	COG0745	RESPONSE REGULATOR receiver
MUG94_RS02495	COG1278	Cold shock
MUG94_RS02510	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
MUG94_RS02515	COG1321	iron dependent repressor
MUG94_RS02520	COG0739	heme binding
MUG94_RS02550	COG0303	'Molybdopterin
MUG94_RS02555	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MUG94_RS02560	COG5002	protein histidine kinase activity
MUG94_RS02565	COG1132	(ABC) transporter
MUG94_RS02580	COG2409	Drug exporters of the RND superfamily
MUG94_RS02590	COG0483	inositol monophosphate 1-phosphatase activity
MUG94_RS02600	COG0045	succinate-CoA ligase (ADP-forming) activity
MUG94_RS02610	COG2814	Major facilitator Superfamily
MUG94_RS02620	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUG94_RS02645	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS02655	COG1396	sequence-specific DNA binding
MUG94_RS02670	COG0028	Belongs to the TPP enzyme family
MUG94_RS02685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUG94_RS02690	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MUG94_RS02695	COG3424	synthase
MUG94_RS02735	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUG94_RS02745	COG0252	asparaginase activity
MUG94_RS02765	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUG94_RS02770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUG94_RS02775	COG0477	Major facilitator Superfamily
MUG94_RS02780	COG1957	nucleoside hydrolase
MUG94_RS02785	COG0477	Major facilitator Superfamily
MUG94_RS02800	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
MUG94_RS02815	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
MUG94_RS02855	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS02860	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
MUG94_RS02860	COG0778	Nitroreductase
MUG94_RS02865	COG1120	ATPase activity
MUG94_RS02870	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUG94_RS02885	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUG94_RS02895	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS02900	COG1116	anion transmembrane transporter activity
MUG94_RS02905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS02910	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MUG94_RS02930	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUG94_RS02935	COG0363	glucosamine-6-phosphate deaminase activity
MUG94_RS02945	COG0747	negative chemotaxis
MUG94_RS02955	COG0444	Belongs to the ABC transporter superfamily
MUG94_RS02960	COG4608	Belongs to the ABC transporter superfamily
MUG94_RS02965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUG94_RS02970	COG1940	carbohydrate kinase activity
MUG94_RS02975	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
MUG94_RS02985	COG0490	domain, Protein
MUG94_RS02985	COG0471	metal ion transport
MUG94_RS03010	COG0640	Transcriptional regulator
MUG94_RS03020	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MUG94_RS03035	COG1914	H( )-stimulated, divalent metal cation uptake system
MUG94_RS03040	COG4336	lyase activity
MUG94_RS03050	COG4770	biotin carboxylase activity
MUG94_RS03055	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUG94_RS03060	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
MUG94_RS03090	COG1472	Belongs to the glycosyl hydrolase 3 family
MUG94_RS03110	COG1129	ABC transporter
MUG94_RS03115	COG4214	carbohydrate transport
MUG94_RS03265	COG2235	arginine
MUG94_RS03280	COG2271	Major facilitator Superfamily
MUG94_RS03285	COG0154	amidase activity
MUG94_RS03305	COG1879	ABC-type sugar transport system periplasmic component
MUG94_RS03310	COG1129	ABC transporter
MUG94_RS03315	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS03320	COG1940	carbohydrate kinase activity
MUG94_RS03335	COG0395	ABC-type sugar transport system, permease component
MUG94_RS03340	COG1175	transmembrane transport
MUG94_RS03350	COG1609	Transcriptional regulator
MUG94_RS03355	COG1177	transmembrane transport
MUG94_RS03360	COG1176	ABC-type spermidine putrescine transport system, permease component I
MUG94_RS03365	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
MUG94_RS03370	COG3842	ATPase activity
MUG94_RS03430	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS03435	COG4172	Belongs to the ABC transporter superfamily
MUG94_RS03440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS03450	COG0747	negative chemotaxis
MUG94_RS03470	COG1063	alcohol dehydrogenase
MUG94_RS03485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUG94_RS03495	COG0640	Transcriptional regulator
MUG94_RS03500	COG0798	PFAM Bile acid sodium symporter
MUG94_RS03505	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUG94_RS03515	COG2072	flavoprotein involved in K transport
MUG94_RS03525	COG1940	carbohydrate kinase activity
MUG94_RS03530	COG2115	Belongs to the xylose isomerase family
MUG94_RS03535	COG1070	Carbohydrate kinase
MUG94_RS03560	COG3458	cephalosporin-C deacetylase activity
MUG94_RS03565	COG1472	Belongs to the glycosyl hydrolase 3 family
MUG94_RS03575	COG1175	transmembrane transport
MUG94_RS03580	COG1653	transport
MUG94_RS03585	COG1609	Transcriptional regulator
MUG94_RS03590	COG2814	Major facilitator Superfamily
MUG94_RS03605	COG1175	transmembrane transport
MUG94_RS03610	COG0395	ABC-type sugar transport system, permease component
MUG94_RS03630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUG94_RS03635	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
MUG94_RS03640	COG0667	Aldo Keto reductase
MUG94_RS03655	COG0477	Major facilitator Superfamily
MUG94_RS03670	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS03675	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUG94_RS03680	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
MUG94_RS03685	COG4585	Histidine kinase
MUG94_RS03705	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUG94_RS03720	COG0277	FAD linked oxidase domain protein
MUG94_RS03725	COG1058	Belongs to the CinA family
MUG94_RS03725	COG1546	Belongs to the CinA family
MUG94_RS03735	COG0247	lactate metabolic process
MUG94_RS03740	COG1139	Iron-sulfur cluster binding protein
MUG94_RS03745	COG1556	Lactate utilization protein
MUG94_RS03760	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUG94_RS03795	COG0683	leucine binding
MUG94_RS03805	COG1620	l-lactate permease
MUG94_RS03815	COG3619	membrane
MUG94_RS03820	COG0747	negative chemotaxis
MUG94_RS03830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS03835	COG0405	Gamma-glutamyltransferase
MUG94_RS03845	COG1802	Transcriptional regulator
MUG94_RS03860	COG0039	L-malate dehydrogenase activity
MUG94_RS03865	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUG94_RS03875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUG94_RS03895	COG3655	Transcriptional regulator
MUG94_RS03905	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MUG94_RS03910	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUG94_RS03925	COG3842	ATPase activity
MUG94_RS03930	COG1176	ABC-type spermidine putrescine transport system, permease component I
MUG94_RS03935	COG1177	transmembrane transport
MUG94_RS03950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS03965	COG1278	Cold shock
MUG94_RS03970	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
MUG94_RS03970	COG2066	Belongs to the glutaminase family
MUG94_RS03975	COG1278	Cold shock
MUG94_RS03980	COG1178	ABC-type Fe3 transport system permease component
MUG94_RS03985	COG3842	ATPase activity
MUG94_RS03995	COG0747	negative chemotaxis
MUG94_RS04005	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS04030	COG0515	serine threonine protein kinase
MUG94_RS04030	COG2815	serine threonine protein kinase
MUG94_RS04040	COG3012	SEC-C Motif Domain Protein
MUG94_RS04045	COG1063	alcohol dehydrogenase
MUG94_RS04060	COG0366	Alpha amylase catalytic
MUG94_RS04065	COG1174	glycine betaine transport
MUG94_RS04075	COG1174	glycine betaine transport
MUG94_RS04085	COG0471	metal ion transport
MUG94_RS04090	COG0596	Alpha beta hydrolase
MUG94_RS04095	COG0829	nickel cation binding
MUG94_RS04100	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
MUG94_RS04110	COG0804	urea catabolic process
MUG94_RS04115	COG0832	Belongs to the urease beta subunit family
MUG94_RS04120	COG0831	urea catabolic process
MUG94_RS04140	COG0753	catalase activity
MUG94_RS04145	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS04155	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
MUG94_RS04165	COG0531	amino acid
MUG94_RS04170	COG2186	Transcriptional regulator
MUG94_RS04245	COG0477	Major facilitator Superfamily
MUG94_RS04255	COG0138	bifunctional purine biosynthesis protein purh
MUG94_RS04315	COG0492	ferredoxin-NADP+ reductase activity
MUG94_RS04320	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MUG94_RS04325	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MUG94_RS04370	COG0180	Tryptophanyl-tRNA synthetase
MUG94_RS04385	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MUG94_RS04400	COG2009	succinate dehydrogenase
MUG94_RS04405	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
MUG94_RS04405	COG0662	Cupin 2, conserved barrel domain protein
MUG94_RS04410	COG1473	amidohydrolase
MUG94_RS04410	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
MUG94_RS04415	COG1744	ABC transporter substrate-binding protein PnrA-like
MUG94_RS04420	COG3845	ABC transporter
MUG94_RS04425	COG4603	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS04430	COG1079	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS04450	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
MUG94_RS04455	COG3956	TIGRFAM MazG family protein
MUG94_RS04460	COG0148	phosphopyruvate hydratase activity
MUG94_RS04485	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUG94_RS04500	COG1609	Transcriptional regulator
MUG94_RS04505	COG1129	ABC transporter
MUG94_RS04510	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS04520	COG1869	D-ribose catabolic process
MUG94_RS04560	COG2017	converts alpha-aldose to the beta-anomer
MUG94_RS04570	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MUG94_RS04575	COG0705	Rhomboid family
MUG94_RS04580	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MUG94_RS04590	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUG94_RS04600	COG1331	Highly conserved protein containing a thioredoxin domain
MUG94_RS04610	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MUG94_RS04615	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
MUG94_RS04625	COG1051	belongs to the nudix hydrolase family
MUG94_RS04630	COG0477	Major facilitator Superfamily
MUG94_RS04640	COG0114	fumarate hydratase activity
MUG94_RS04645	COG0288	reversible hydration of carbon dioxide
MUG94_RS04655	COG1494	fructose-1,6-bisphosphatase
MUG94_RS04670	COG1482	cell wall glycoprotein biosynthetic process
MUG94_RS04675	COG1316	TRANSCRIPTIONal
MUG94_RS04730	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
MUG94_RS04755	COG1022	Amp-dependent synthetase and ligase
MUG94_RS04785	COG0714	Associated with various cellular activities
MUG94_RS04790	COG0084	hydrolase, TatD family'
MUG94_RS04795	COG3583	domain protein
MUG94_RS04805	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MUG94_RS04810	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
MUG94_RS04815	COG0488	(ABC) transporter
MUG94_RS04840	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MUG94_RS04845	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MUG94_RS04850	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MUG94_RS04855	COG0193	aminoacyl-tRNA hydrolase activity
MUG94_RS04950	COG0822	iron-sulfur transferase activity
MUG94_RS04955	COG5002	protein histidine kinase activity
MUG94_RS04960	COG0745	RESPONSE REGULATOR receiver
MUG94_RS04975	COG5002	protein histidine kinase activity
MUG94_RS05015	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MUG94_RS05055	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
MUG94_RS05075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUG94_RS05090	COG0477	Major facilitator Superfamily
MUG94_RS05095	COG4770	biotin carboxylase activity
MUG94_RS05105	COG0424	maF-like protein
MUG94_RS05110	COG1823	symporter activity
MUG94_RS05125	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MUG94_RS05135	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS05155	COG0631	protein serine/threonine phosphatase activity
MUG94_RS05160	COG1674	ftsk spoiiie
MUG94_RS05200	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MUG94_RS05225	COG0601	transmembrane transport
MUG94_RS05230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS05235	COG0444	Belongs to the ABC transporter superfamily
MUG94_RS05245	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MUG94_RS05255	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUG94_RS05260	COG0154	amidase activity
MUG94_RS05265	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUG94_RS05285	COG1254	Belongs to the acylphosphatase family
MUG94_RS05290	COG2986	histidine ammonia-lyase
MUG94_RS05300	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
MUG94_RS05315	COG1228	amidohydrolase
MUG94_RS05335	COG3250	beta-galactosidase activity
MUG94_RS05350	COG2873	o-acetylhomoserine
MUG94_RS05355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MUG94_RS05370	COG2755	lipolytic protein G-D-S-L family
MUG94_RS05390	COG0423	glycine-tRNA ligase activity
MUG94_RS05400	COG1309	transcriptional regulator
MUG94_RS05410	COG2031	fatty acid transporter
MUG94_RS05430	COG0358	DNA primase activity
MUG94_RS05450	COG0477	Major facilitator Superfamily
MUG94_RS05470	COG0297	glycogen (starch) synthase activity
MUG94_RS05480	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS05490	COG0052	Belongs to the universal ribosomal protein uS2 family
MUG94_RS05495	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
MUG94_RS05500	COG0528	UMP kinase activity
MUG94_RS05505	COG0233	cytoplasmic translational termination
MUG94_RS05510	COG0575	Belongs to the CDS family
MUG94_RS05520	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUG94_RS05535	COG3275	phosphorelay sensor kinase activity
MUG94_RS05545	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUG94_RS05560	COG0022	dehydrogenase e1 component
MUG94_RS05565	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUG94_RS05580	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MUG94_RS05590	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS05620	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
MUG94_RS05625	COG0750	zinc metalloprotease
MUG94_RS05645	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
MUG94_RS05665	COG0442	prolyl-tRNA aminoacylation
MUG94_RS05690	COG0195	Participates in both transcription termination and antitermination
MUG94_RS05700	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MUG94_RS05705	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MUG94_RS05720	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MUG94_RS05745	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MUG94_RS05750	COG1185	polyribonucleotide nucleotidyltransferase activity
MUG94_RS05755	COG0612	Peptidase, M16
MUG94_RS05780	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUG94_RS05795	COG0521	Mo-molybdopterin cofactor biosynthetic process
MUG94_RS05805	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
MUG94_RS05820	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUG94_RS05825	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUG94_RS05830	COG1674	ftsk spoiiie
MUG94_RS05840	COG1058	Belongs to the CinA family
MUG94_RS05840	COG1546	Belongs to the CinA family
MUG94_RS05845	COG1396	sequence-specific DNA binding
MUG94_RS05860	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MUG94_RS05865	COG2137	regulation of response to DNA damage stimulus
MUG94_RS05880	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUG94_RS05885	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MUG94_RS05890	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
MUG94_RS05895	COG2813	Specifically methylates the guanine in position
MUG94_RS05900	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MUG94_RS05910	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MUG94_RS05915	COG1388	LysM domain
MUG94_RS05920	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUG94_RS05925	COG0131	Imidazoleglycerol-phosphate dehydratase
MUG94_RS05930	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MUG94_RS05940	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
MUG94_RS05970	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MUG94_RS05975	COG0291	Belongs to the bacterial ribosomal protein bL35 family
MUG94_RS05980	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MUG94_RS05985	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUG94_RS05995	COG2814	Major facilitator Superfamily
MUG94_RS06000	COG0494	nUDIX hydrolase
MUG94_RS06015	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MUG94_RS06020	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUG94_RS06020	COG0072	phenylalanine-tRNA ligase activity
MUG94_RS06065	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
MUG94_RS06070	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MUG94_RS06075	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MUG94_RS06080	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUG94_RS06085	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUG94_RS06090	COG1438	arginine binding
MUG94_RS06095	COG0137	argininosuccinate synthase activity
MUG94_RS06100	COG0165	Argininosuccinate lyase
MUG94_RS06105	COG0259	pyridoxamine-phosphate oxidase activity
MUG94_RS06120	COG2094	Belongs to the DNA glycosylase MPG family
MUG94_RS06130	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUG94_RS06140	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MUG94_RS06165	COG0647	UMP catabolic process
MUG94_RS06180	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUG94_RS06185	COG0497	DNA recombination
MUG94_RS06190	COG0504	CTP synthase activity
MUG94_RS06195	COG0494	nUDIX hydrolase
MUG94_RS06215	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
MUG94_RS06220	COG2079	MmgE PrpD family protein
MUG94_RS06245	COG2072	flavoprotein involved in K transport
MUG94_RS06255	COG2197	response regulator
MUG94_RS06260	COG4585	Histidine kinase
MUG94_RS06265	COG4565	transcriptional regulatory protein
MUG94_RS06270	COG3290	protein histidine kinase activity
MUG94_RS06275	COG1301	dicarboxylic acid transport
MUG94_RS06285	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MUG94_RS06290	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MUG94_RS06305	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
MUG94_RS06310	COG1160	GTP binding
MUG94_RS06335	COG2133	pyrroloquinoline quinone binding
MUG94_RS06340	COG1716	ATPase activity
MUG94_RS06365	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
MUG94_RS06380	COG1940	carbohydrate kinase activity
MUG94_RS06400	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
MUG94_RS06405	COG0515	serine threonine protein kinase
MUG94_RS06405	COG2815	serine threonine protein kinase
MUG94_RS06410	COG3942	CHAP domain
MUG94_RS06410	COG1388	LysM domain
MUG94_RS06420	COG0142	geranyltranstransferase activity
MUG94_RS06430	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUG94_RS06440	COG2001	Belongs to the MraZ family
MUG94_RS06445	COG0275	rRNA processing
MUG94_RS06455	COG0768	penicillin binding
MUG94_RS06465	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUG94_RS06470	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUG94_RS06475	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUG94_RS06485	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUG94_RS06490	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MUG94_RS06500	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MUG94_RS06505	COG1496	oxidoreductase activity
MUG94_RS06510	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MUG94_RS06515	COG1799	cell septum assembly
MUG94_RS06525	COG3599	regulation of cell shape
MUG94_RS06530	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MUG94_RS06540	COG0587	DNA-directed DNA polymerase activity
MUG94_RS06545	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MUG94_RS06550	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MUG94_RS06555	COG1940	carbohydrate kinase activity
MUG94_RS06570	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
MUG94_RS06575	COG0174	glutamine synthetase
MUG94_RS06580	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
MUG94_RS06585	COG0765	amino acid transport
MUG94_RS06590	COG1126	abc transporter atp-binding protein
MUG94_RS06620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MUG94_RS06625	COG0321	lipoyl(octanoyl) transferase activity
MUG94_RS06635	COG4946	Tricorn protease homolog
MUG94_RS06635	COG0793	Belongs to the peptidase S41A family
MUG94_RS06640	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUG94_RS06645	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUG94_RS06655	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
MUG94_RS06660	COG0829	nickel cation binding
MUG94_RS06665	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
MUG94_RS06670	COG0830	nickel cation binding
MUG94_RS06675	COG0804	urea catabolic process
MUG94_RS06690	COG0831	urea catabolic process
MUG94_RS06695	COG1764	response to oxidative stress
MUG94_RS06705	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUG94_RS06710	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUG94_RS06715	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MUG94_RS06735	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUG94_RS06745	COG0187	DNA topoisomerase II activity
MUG94_RS06760	COG1271	oxidase subunit
MUG94_RS06765	COG1294	oxidase, subunit
MUG94_RS06770	COG4988	ABC transporter
MUG94_RS06790	COG1064	alcohol dehydrogenase
MUG94_RS06795	COG1309	transcriptional regulator
MUG94_RS06815	COG1937	Protein conserved in bacteria
MUG94_RS06830	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUG94_RS06850	COG1435	thymidine kinase activity
MUG94_RS06855	COG1116	anion transmembrane transporter activity
MUG94_RS06860	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS06865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS06895	COG0756	dUTP diphosphatase activity
MUG94_RS06920	COG0569	domain protein
MUG94_RS06925	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUG94_RS06930	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MUG94_RS06935	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
MUG94_RS06950	COG0667	Aldo Keto reductase
MUG94_RS06965	COG0655	NAD(P)H dehydrogenase (quinone) activity
MUG94_RS06980	COG1024	Enoyl-CoA hydratase
MUG94_RS06980	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUG94_RS06985	COG0183	Belongs to the thiolase family
MUG94_RS07050	COG0737	Belongs to the 5'-nucleotidase family
MUG94_RS07100	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MUG94_RS07110	COG2072	flavoprotein involved in K transport
MUG94_RS07115	COG0183	Belongs to the thiolase family
MUG94_RS07135	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
MUG94_RS07155	COG1269	ATP hydrolysis coupled proton transport
MUG94_RS07180	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUG94_RS07200	COG2226	methyltransferase
MUG94_RS07210	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MUG94_RS07230	COG2207	Transcriptional regulator
MUG94_RS07240	COG1454	alcohol dehydrogenase
MUG94_RS07310	COG0242	peptide deformylase activity
MUG94_RS07315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MUG94_RS07325	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MUG94_RS07345	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUG94_RS07345	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUG94_RS07350	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUG94_RS07350	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUG94_RS07355	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
MUG94_RS07385	COG0477	Major facilitator Superfamily
MUG94_RS07430	COG4941	Belongs to the sigma-70 factor family
MUG94_RS07435	COG3795	YCII-related domain
MUG94_RS07465	COG0140	phosphoribosyl-ATP diphosphatase activity
MUG94_RS07470	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MUG94_RS07475	COG0107	imidazoleglycerol-phosphate synthase activity
MUG94_RS07485	COG1064	alcohol dehydrogenase
MUG94_RS07500	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MUG94_RS07520	COG0134	indole-3-glycerol-phosphate synthase activity
MUG94_RS07525	COG0133	tryptophan synthase activity
MUG94_RS07530	COG0159	tryptophan synthase activity
MUG94_RS07535	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MUG94_RS07540	COG0067	glutamate synthase
MUG94_RS07540	COG0069	glutamate synthase activity
MUG94_RS07540	COG0070	glutamate synthase
MUG94_RS07550	COG1309	transcriptional regulator
MUG94_RS07555	COG0469	pyruvate kinase activity
MUG94_RS07575	COG2186	Transcriptional regulator
MUG94_RS07590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS07595	COG1116	anion transmembrane transporter activity
MUG94_RS07595	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MUG94_RS07600	COG0154	amidase activity
MUG94_RS07605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUG94_RS07615	COG3962	Belongs to the TPP enzyme family
MUG94_RS07620	COG1082	Xylose isomerase domain protein TIM barrel
MUG94_RS07625	COG0673	inositol 2-dehydrogenase activity
MUG94_RS07630	COG3718	enzyme involved in inositol metabolism
MUG94_RS07635	COG2188	Transcriptional regulator
MUG94_RS07640	COG1879	ABC-type sugar transport system periplasmic component
MUG94_RS07645	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS07655	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUG94_RS07680	COG1879	ABC-type sugar transport system periplasmic component
MUG94_RS07690	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS07695	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS07700	COG0385	Bile acid
MUG94_RS07715	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUG94_RS07725	COG1329	Transcriptional regulator
MUG94_RS07730	COG0778	Nitroreductase
MUG94_RS07760	COG1132	(ABC) transporter
MUG94_RS07770	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MUG94_RS07800	COG3268	Saccharopine dehydrogenase
MUG94_RS07825	COG0656	L-ascorbic acid biosynthetic process
MUG94_RS07840	COG1854	S-ribosylhomocysteine lyase activity
MUG94_RS07845	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MUG94_RS07850	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUG94_RS07895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUG94_RS07920	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUG94_RS07925	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUG94_RS07935	COG0656	L-ascorbic acid biosynthetic process
MUG94_RS07960	COG1309	transcriptional regulator
MUG94_RS08015	COG1902	pentaerythritol trinitrate reductase activity
MUG94_RS08035	COG4133	protoheme IX ABC transporter activity
MUG94_RS08045	COG3422	double-strand break repair
MUG94_RS08060	COG0628	permease
MUG94_RS08065	COG0628	permease
MUG94_RS08070	COG0110	maltose O-acetyltransferase activity
MUG94_RS08105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS08155	COG1802	Transcriptional regulator
MUG94_RS08160	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS08170	COG3971	2-oxopent-4-enoate hydratase activity
MUG94_RS08180	COG0477	Major facilitator Superfamily
MUG94_RS08195	COG0726	polysaccharide deacetylase
MUG94_RS08210	COG5650	phosphatidylinositol metabolic process
MUG94_RS08230	COG2072	flavoprotein involved in K transport
MUG94_RS08240	COG2890	protein-(glutamine-N5) methyltransferase activity
MUG94_RS08255	COG1643	Atp-dependent helicase
MUG94_RS08270	COG2205	protein histidine kinase activity
MUG94_RS08280	COG3103	Sh3 type 3 domain protein
MUG94_RS08280	COG1388	LysM domain
MUG94_RS08280	COG0791	NLP P60 protein
MUG94_RS08290	COG2197	response regulator
MUG94_RS08300	COG1136	(ABC) transporter
MUG94_RS08310	COG2814	Major facilitator Superfamily
MUG94_RS08325	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS08345	COG0488	(ABC) transporter
MUG94_RS08355	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
MUG94_RS08365	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUG94_RS08385	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
MUG94_RS08395	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
MUG94_RS08415	COG1785	Belongs to the alkaline phosphatase family
MUG94_RS08435	COG0009	L-threonylcarbamoyladenylate synthase
MUG94_RS08445	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS08455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUG94_RS08470	COG0277	FAD linked oxidase domain protein
MUG94_RS08475	COG2160	L-arabinose isomerase activity
MUG94_RS08490	COG1609	Transcriptional regulator
MUG94_RS08495	COG2017	converts alpha-aldose to the beta-anomer
MUG94_RS08500	COG1136	(ABC) transporter
MUG94_RS08510	COG4585	Histidine kinase
MUG94_RS08515	COG2197	response regulator
MUG94_RS08520	COG0366	Alpha amylase catalytic
MUG94_RS08525	COG2814	Major facilitator Superfamily
MUG94_RS08530	COG1793	dna ligase
MUG94_RS08530	COG3285	dna ligase
MUG94_RS08535	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
MUG94_RS08560	COG0471	metal ion transport
MUG94_RS08565	COG0583	DNA-binding transcription factor activity
MUG94_RS08575	COG0473	3-isopropylmalate dehydrogenase activity
MUG94_RS08590	COG1063	alcohol dehydrogenase
MUG94_RS08615	COG0542	response to heat
MUG94_RS08620	COG4941	Belongs to the sigma-70 factor family
MUG94_RS08640	COG0242	peptide deformylase activity
MUG94_RS08645	COG0823	Involved in the tonB-independent uptake of proteins
MUG94_RS08645	COG1506	peptidase
MUG94_RS08645	COG4946	Tricorn protease homolog
MUG94_RS08670	COG1216	Glycosyl transferase, family 2
MUG94_RS08675	COG1574	metal-dependent hydrolase with the TIM-barrel fold
MUG94_RS08680	COG4581	dead DEAH box helicase
MUG94_RS08685	COG0805	protein transport
MUG94_RS08690	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MUG94_RS08715	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
MUG94_RS08720	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
MUG94_RS08725	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
MUG94_RS08735	COG4122	O-methyltransferase activity
MUG94_RS08740	COG1222	aaa ATPase
MUG94_RS08750	COG1994	Peptidase M50
MUG94_RS08750	COG0517	IMP dehydrogenase activity
MUG94_RS08755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUG94_RS08765	COG0215	cysteine-tRNA ligase activity
MUG94_RS08770	COG1968	undecaprenyl-diphosphatase activity
MUG94_RS08790	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUG94_RS08800	COG1253	flavin adenine dinucleotide binding
MUG94_RS08810	COG0589	response to stress
MUG94_RS08815	COG4214	carbohydrate transport
MUG94_RS08820	COG1129	ABC transporter
MUG94_RS08825	COG4213	ABC transporter substrate-binding protein
MUG94_RS08835	COG2030	dehydratase
MUG94_RS08840	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS08845	COG0183	Belongs to the thiolase family
MUG94_RS08860	COG0297	glycogen (starch) synthase activity
MUG94_RS08875	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
MUG94_RS08880	COG2855	membrane
MUG94_RS08905	COG0254	rRNA binding
MUG94_RS08925	COG1119	ATPase activity
MUG94_RS08935	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS08970	COG0488	(ABC) transporter
MUG94_RS08975	COG1268	BioY protein
MUG94_RS08980	COG1122	ATPase activity
MUG94_RS09000	COG1011	Hydrolase
MUG94_RS09010	COG2151	metal-sulfur cluster biosynthetic enzyme
MUG94_RS09015	COG0396	ATPase activity
MUG94_RS09035	COG1131	(ABC) transporter
MUG94_RS09050	COG0109	protoheme IX farnesyltransferase activity
MUG94_RS09060	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MUG94_RS09080	COG0363	glucosamine-6-phosphate deaminase activity
MUG94_RS09085	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUG94_RS09090	COG0149	triose-phosphate isomerase activity
MUG94_RS09095	COG0126	phosphoglycerate kinase activity
MUG94_RS09110	COG1481	regulation of sporulation
MUG94_RS09120	COG1660	Displays ATPase and GTPase activities
MUG94_RS09125	COG0322	excinuclease ABC activity
MUG94_RS09160	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUG94_RS09165	COG0531	amino acid
MUG94_RS09170	COG4106	trans-aconitate 2-methyltransferase activity
MUG94_RS09205	COG0556	nucleotide-excision repair
MUG94_RS09210	COG0237	dephospho-CoA kinase activity
MUG94_RS09210	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MUG94_RS09215	COG1739	Uncharacterized protein family UPF0029
MUG94_RS09220	COG2890	protein-(glutamine-N5) methyltransferase activity
MUG94_RS09230	COG1175	transmembrane transport
MUG94_RS09235	COG0395	ABC-type sugar transport system, permease component
MUG94_RS09240	COG2723	6-phospho-beta-galactosidase activity
MUG94_RS09250	COG0673	inositol 2-dehydrogenase activity
MUG94_RS09255	COG0539	negative regulation of cytoplasmic translation
MUG94_RS09260	COG4552	Acetyltransferase involved in intracellular survival and related
MUG94_RS09270	COG2050	protein possibly involved in aromatic compounds catabolism
MUG94_RS09275	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MUG94_RS09295	COG2814	Major facilitator Superfamily
MUG94_RS09305	COG0076	glutamate decarboxylase activity
MUG94_RS09310	COG0531	amino acid
MUG94_RS09315	COG2066	Belongs to the glutaminase family
MUG94_RS09320	COG1414	Transcriptional regulator
MUG94_RS09325	COG1082	Xylose isomerase domain protein TIM barrel
MUG94_RS09325	COG3185	4-Hydroxyphenylpyruvate dioxygenase
MUG94_RS09330	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUG94_RS09340	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
MUG94_RS09345	COG1472	Belongs to the glycosyl hydrolase 3 family
MUG94_RS09350	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS09355	COG1607	acyl-coa hydrolase
MUG94_RS09370	COG2272	Belongs to the type-B carboxylesterase lipase family
MUG94_RS09385	COG0488	(ABC) transporter
MUG94_RS09410	COG0415	Belongs to the DNA photolyase family
MUG94_RS09420	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUG94_RS09425	COG1024	Enoyl-CoA hydratase
MUG94_RS09430	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS09445	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUG94_RS09450	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS09455	COG2391	methyltransferase activity
MUG94_RS09460	COG0425	Belongs to the sulfur carrier protein TusA family
MUG94_RS09470	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS09475	COG0667	Aldo Keto reductase
MUG94_RS09480	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS09495	COG1309	transcriptional regulator
MUG94_RS09510	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS09525	COG1136	(ABC) transporter
MUG94_RS09545	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUG94_RS09550	COG1845	cytochrome c oxidase, subunit III
MUG94_RS09555	COG2010	Cytochrome c
MUG94_RS09560	COG0723	plastoquinol--plastocyanin reductase activity
MUG94_RS09565	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
MUG94_RS09575	COG2188	Transcriptional regulator
MUG94_RS09585	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MUG94_RS09590	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUG94_RS09610	COG0167	dihydroorotate dehydrogenase activity
MUG94_RS09620	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MUG94_RS09625	COG1381	Involved in DNA repair and RecF pathway recombination
MUG94_RS09630	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MUG94_RS09635	COG1316	TRANSCRIPTIONal
MUG94_RS09640	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MUG94_RS09650	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MUG94_RS09670	COG0484	heat shock protein binding
MUG94_RS09675	COG1420	regulation of RNA biosynthetic process
MUG94_RS09695	COG0481	GTPase activity
MUG94_RS09705	COG0268	Binds directly to 16S ribosomal RNA
MUG94_RS09715	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
MUG94_RS09725	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
MUG94_RS09725	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
MUG94_RS09735	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
MUG94_RS09760	COG3173	Aminoglycoside phosphotransferase
MUG94_RS09765	COG1596	polysaccharide export
MUG94_RS09765	COG1555	photosystem II stabilization
MUG94_RS09780	COG1307	EDD domain protein, DegV family
MUG94_RS09785	COG0495	leucyl-tRNA aminoacylation
MUG94_RS09790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUG94_RS09805	COG0385	Bile acid
MUG94_RS09810	COG2072	flavoprotein involved in K transport
MUG94_RS09815	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MUG94_RS09820	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MUG94_RS09825	COG0656	L-ascorbic acid biosynthetic process
MUG94_RS09835	COG0438	transferase activity, transferring glycosyl groups
MUG94_RS09845	COG2130	NADP-dependent
MUG94_RS09850	COG1846	Transcriptional regulator
MUG94_RS09855	COG0842	Transport permease protein
MUG94_RS09855	COG1129	ABC transporter
MUG94_RS09875	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MUG94_RS09885	COG1758	RNA polymerase activity
MUG94_RS09890	COG0194	GDP metabolic process
MUG94_RS09895	COG0194	GDP metabolic process
MUG94_RS09900	COG0284	orotidine-5'-phosphate decarboxylase activity
MUG94_RS09905	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUG94_RS09910	COG0505	Belongs to the CarA family
MUG94_RS09920	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUG94_RS09925	COG0540	Belongs to the ATCase OTCase family
MUG94_RS09930	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MUG94_RS09940	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUG94_RS09945	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MUG94_RS09950	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MUG94_RS09955	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUG94_RS09960	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
MUG94_RS09965	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUG94_RS09975	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MUG94_RS09980	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MUG94_RS09995	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MUG94_RS10015	COG0384	phenazine biosynthesis protein PhzF
MUG94_RS10025	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MUG94_RS10035	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
MUG94_RS10045	COG4585	Histidine kinase
MUG94_RS10050	COG2197	response regulator
MUG94_RS10055	COG0124	histidyl-tRNA synthetase
MUG94_RS10065	COG1196	nuclear chromosome segregation
MUG94_RS10075	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MUG94_RS10080	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUG94_RS10085	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUG94_RS10095	COG2255	four-way junction helicase activity
MUG94_RS10100	COG0632	four-way junction helicase activity
MUG94_RS10105	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
MUG94_RS10110	COG0217	transcriptional regulatory protein
MUG94_RS10115	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
MUG94_RS10120	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUG94_RS10150	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MUG94_RS10155	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MUG94_RS10165	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUG94_RS10170	COG0587	DNA-directed DNA polymerase activity
MUG94_RS10200	COG2409	Drug exporters of the RND superfamily
MUG94_RS10210	COG2135	peptidase activity
MUG94_RS10240	COG3896	Chloramphenicol phosphotransferase-like protein
MUG94_RS10295	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MUG94_RS10320	COG1970	mechanosensitive ion channel activity
MUG94_RS10420	COG0656	L-ascorbic acid biosynthetic process
MUG94_RS10425	COG0667	Aldo Keto reductase
MUG94_RS10430	COG2135	peptidase activity
MUG94_RS10455	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS10480	COG1804	L-carnitine dehydratase bile acid-inducible protein F
MUG94_RS10490	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
MUG94_RS10525	COG2318	DinB family
MUG94_RS10540	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUG94_RS10550	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUG94_RS10565	COG0583	DNA-binding transcription factor activity
MUG94_RS10635	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
MUG94_RS10645	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
MUG94_RS10650	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
MUG94_RS10655	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MUG94_RS10660	COG0211	Belongs to the bacterial ribosomal protein bL27 family
MUG94_RS10665	COG0261	This protein binds to 23S rRNA in the presence of protein L20
MUG94_RS10670	COG1530	ribonuclease E activity
MUG94_RS10690	COG2239	Acts as a magnesium transporter
MUG94_RS10695	COG0105	UTP biosynthetic process
MUG94_RS10705	COG0285	dihydrofolate synthase activity
MUG94_RS10710	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MUG94_RS10725	COG3189	MarR family transcriptional regulator
MUG94_RS10730	COG0525	valine-tRNA ligase activity
MUG94_RS10735	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MUG94_RS10740	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MUG94_RS10745	COG0740	serine-type endopeptidase activity
MUG94_RS10755	COG0544	peptidyl-prolyl cis-trans isomerase activity
MUG94_RS10780	COG0698	ribose 5-phosphate isomerase
MUG94_RS10800	COG0668	transmembrane transport
MUG94_RS10805	COG2346	COG2346, Truncated hemoglobins
MUG94_RS10815	COG0824	Thioesterase
MUG94_RS10820	COG1946	Acyl-CoA thioesterase
MUG94_RS10835	COG0629	single-stranded DNA binding
MUG94_RS10910	COG0242	peptide deformylase activity
MUG94_RS10930	COG3022	response to hydroperoxide
MUG94_RS10945	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MUG94_RS10950	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUG94_RS10960	COG1045	serine acetyltransferase
MUG94_RS10965	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MUG94_RS10995	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
MUG94_RS11000	COG2186	Transcriptional regulator
MUG94_RS11030	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUG94_RS11035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUG94_RS11040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MUG94_RS11050	COG4974	Belongs to the 'phage' integrase family
MUG94_RS11070	COG0792	nuclease activity
MUG94_RS11095	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUG94_RS11105	COG0681	Belongs to the peptidase S26 family
MUG94_RS11110	COG0335	large ribosomal subunit rRNA binding
MUG94_RS11115	COG0336	Belongs to the RNA methyltransferase TrmD family
MUG94_RS11120	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MUG94_RS11125	COG1837	Belongs to the UPF0109 family
MUG94_RS11130	COG0228	four-way junction DNA binding
MUG94_RS11135	COG2514	catechol 2,3-dioxygenase activity
MUG94_RS11160	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUG94_RS11215	COG2814	Major facilitator Superfamily
MUG94_RS11230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUG94_RS11235	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS11240	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUG94_RS11245	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUG94_RS11250	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUG94_RS11260	COG0333	Belongs to the bacterial ribosomal protein bL32 family
MUG94_RS11310	COG0463	Glycosyl transferase, family 2
MUG94_RS11320	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MUG94_RS11335	COG0742	ribosomal rna small subunit methyltransferase
MUG94_RS11345	COG1461	Dihydroxyacetone kinase
MUG94_RS11355	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUG94_RS11375	COG0438	transferase activity, transferring glycosyl groups
MUG94_RS11380	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
MUG94_RS11390	COG1134	teichoic acid transport
MUG94_RS11420	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUG94_RS11425	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
MUG94_RS11435	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUG94_RS11440	COG0066	3-isopropylmalate dehydratase activity
MUG94_RS11445	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MUG94_RS11450	COG1414	Transcriptional regulator
MUG94_RS11485	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
MUG94_RS11500	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MUG94_RS11535	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUG94_RS11540	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUG94_RS11545	COG0473	3-isopropylmalate dehydrogenase activity
MUG94_RS11555	COG0463	Glycosyl transferase, family 2
MUG94_RS11570	COG4585	Histidine kinase
MUG94_RS11575	COG2197	response regulator
MUG94_RS11590	COG1136	(ABC) transporter
MUG94_RS11590	COG0577	efflux transmembrane transporter activity
MUG94_RS11610	COG1088	dTDP-glucose 4,6-dehydratase activity
MUG94_RS11615	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
MUG94_RS11630	COG1136	(ABC) transporter
MUG94_RS11630	COG0577	efflux transmembrane transporter activity
MUG94_RS11640	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MUG94_RS11645	COG0440	acetolactate synthase activity
MUG94_RS11655	COG0129	dihydroxy-acid dehydratase activity
MUG94_RS11680	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS11700	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
MUG94_RS11705	COG0402	S-adenosylhomocysteine deaminase activity
MUG94_RS11730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS11760	COG3415	Transposase
MUG94_RS11760	COG2801	Transposase and inactivated derivatives
MUG94_RS11770	COG0747	negative chemotaxis
MUG94_RS11775	COG0601	transmembrane transport
MUG94_RS11780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS11790	COG0747	negative chemotaxis
MUG94_RS11795	COG0579	oxidoreductase
MUG94_RS11800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MUG94_RS11810	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS11820	COG4221	oxidoreductase activity
MUG94_RS11825	COG2814	Major facilitator Superfamily
MUG94_RS11830	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUG94_RS11845	COG1104	cysteine desulfurase activity
MUG94_RS11855	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
MUG94_RS11870	COG1113	amino acid transport
MUG94_RS11880	COG0515	serine threonine protein kinase
MUG94_RS11880	COG2815	serine threonine protein kinase
MUG94_RS11895	COG1116	anion transmembrane transporter activity
MUG94_RS11900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS11905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS11920	COG0419	ATPase involved in DNA repair
MUG94_RS11925	COG0420	3'-5' exonuclease activity
MUG94_RS11945	COG0586	Pfam SNARE associated Golgi protein
MUG94_RS11950	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MUG94_RS11955	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
MUG94_RS11975	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MUG94_RS11985	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
MUG94_RS11990	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MUG94_RS11995	COG1335	isochorismatase
MUG94_RS12020	COG1131	(ABC) transporter
MUG94_RS12025	COG1902	pentaerythritol trinitrate reductase activity
MUG94_RS12050	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
MUG94_RS12060	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUG94_RS12070	COG0355	proton-transporting ATP synthase activity, rotational mechanism
MUG94_RS12075	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MUG94_RS12080	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MUG94_RS12085	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MUG94_RS12090	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUG94_RS12095	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MUG94_RS12100	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUG94_RS12105	COG0356	it plays a direct role in the translocation of protons across the membrane
MUG94_RS12120	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUG94_RS12150	COG2890	protein-(glutamine-N5) methyltransferase activity
MUG94_RS12155	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MUG94_RS12165	COG0083	homoserine kinase activity
MUG94_RS12170	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MUG94_RS12175	COG0460	homoserine dehydrogenase
MUG94_RS12185	COG0018	arginyl-trna synthetase
MUG94_RS12200	COG1017	nitric oxide dioxygenase activity
MUG94_RS12200	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUG94_RS12210	COG0028	Belongs to the TPP enzyme family
MUG94_RS12215	COG0577	efflux transmembrane transporter activity
MUG94_RS12215	COG1136	(ABC) transporter
MUG94_RS12220	COG0577	efflux transmembrane transporter activity
MUG94_RS12220	COG1136	(ABC) transporter
MUG94_RS12285	COG1643	Atp-dependent helicase
MUG94_RS12300	COG0537	adenosine 5'-monophosphoramidase activity
MUG94_RS12310	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MUG94_RS12320	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUG94_RS12325	COG1121	(ABC) transporter
MUG94_RS12340	COG1253	flavin adenine dinucleotide binding
MUG94_RS12345	COG0567	Dehydrogenase, E1 component
MUG94_RS12345	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUG94_RS12355	COG0747	negative chemotaxis
MUG94_RS12365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS12370	COG4172	Belongs to the ABC transporter superfamily
MUG94_RS12380	COG1595	DNA-templated transcription, initiation
MUG94_RS12390	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MUG94_RS12400	COG0483	inositol monophosphate 1-phosphatase activity
MUG94_RS12410	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
MUG94_RS12420	COG0366	Alpha amylase catalytic
MUG94_RS12445	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
MUG94_RS12455	COG2177	Part of the ABC transporter FtsEX involved in
MUG94_RS12460	COG2884	Cell division ATP-binding protein ftsE
MUG94_RS12465	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
MUG94_RS12530	COG1216	Glycosyl transferase, family 2
MUG94_RS12550	COG1088	dTDP-glucose 4,6-dehydratase activity
MUG94_RS12560	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
MUG94_RS12575	COG1216	Glycosyl transferase, family 2
MUG94_RS12585	COG2755	lipolytic protein G-D-S-L family
MUG94_RS12585	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
MUG94_RS12605	COG2902	Dehydrogenase
MUG94_RS12640	COG0653	protein targeting
MUG94_RS12645	COG3214	Protein conserved in bacteria
MUG94_RS12650	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MUG94_RS12655	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUG94_RS12660	COG5401	PFAM Sporulation and spore germination
MUG94_RS12665	COG5002	protein histidine kinase activity
MUG94_RS12670	COG0745	RESPONSE REGULATOR receiver
MUG94_RS12690	COG0714	Associated with various cellular activities
MUG94_RS12715	COG0482	sulfurtransferase activity
MUG94_RS12730	COG0484	heat shock protein binding
MUG94_RS12735	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
MUG94_RS12740	COG4106	trans-aconitate 2-methyltransferase activity
MUG94_RS12745	COG1595	DNA-templated transcription, initiation
MUG94_RS12760	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUG94_RS12765	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
MUG94_RS12775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUG94_RS12785	COG1842	Phage shock protein A
MUG94_RS12795	COG1615	UPF0182 protein
MUG94_RS12800	COG3480	Lon protease (S16) C-terminal proteolytic domain
MUG94_RS12855	COG1131	(ABC) transporter
MUG94_RS12865	COG0210	DNA helicase
MUG94_RS12885	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUG94_RS12895	COG1464	Belongs to the NlpA lipoprotein family
MUG94_RS12900	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUG94_RS12905	COG0113	porphobilinogen synthase activity
MUG94_RS12915	COG0181	hydroxymethylbilane synthase activity
MUG94_RS12920	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
MUG94_RS12925	COG3253	May function as heme-dependent peroxidase
MUG94_RS12935	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
MUG94_RS12940	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
MUG94_RS12950	COG1309	transcriptional regulator
MUG94_RS12975	COG0513	Belongs to the DEAD box helicase family
MUG94_RS12990	COG0006	proline dipeptidase activity
MUG94_RS13000	COG2239	Acts as a magnesium transporter
MUG94_RS13015	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MUG94_RS13025	COG1595	DNA-templated transcription, initiation
MUG94_RS13035	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MUG94_RS13050	COG0519	Catalyzes the synthesis of GMP from XMP
MUG94_RS13060	COG1611	Belongs to the LOG family
MUG94_RS13065	COG1126	abc transporter atp-binding protein
MUG94_RS13070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUG94_RS13075	COG0765	amino acid transport
MUG94_RS13080	COG0765	amino acid transport
MUG94_RS13085	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUG94_RS13090	COG2171	N-acyltransferase activity
MUG94_RS13100	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MUG94_RS13130	COG1217	gtp-binding protein TYPA
MUG94_RS13140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUG94_RS13145	COG0601	transmembrane transport
MUG94_RS13150	COG0747	negative chemotaxis
MUG94_RS13155	COG0747	negative chemotaxis
MUG94_RS13175	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUG94_RS13195	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUG94_RS13220	COG0395	ABC-type sugar transport system, permease component
MUG94_RS13235	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUG94_RS13265	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS13310	COG0012	GTP binding
MUG94_RS13315	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
MUG94_RS13325	COG1570	exodeoxyribonuclease VII activity
MUG94_RS13330	COG1722	exodeoxyribonuclease VII activity
MUG94_RS13345	COG1174	glycine betaine transport
MUG94_RS13350	COG1174	glycine betaine transport
MUG94_RS13365	COG2971	BadF BadG BcrA BcrD
MUG94_RS13385	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MUG94_RS13390	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MUG94_RS13420	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MUG94_RS13420	COG0519	Catalyzes the synthesis of GMP from XMP
MUG94_RS13440	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUG94_RS13445	COG0516	GMP reductase activity
MUG94_RS13455	COG0459	protein refolding
MUG94_RS13460	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MUG94_RS13465	COG4607	ABC-type enterochelin transport system periplasmic component
MUG94_RS13470	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUG94_RS13475	COG4605	iron ion homeostasis
MUG94_RS13480	COG4604	ABC transporter, ATP-binding protein
MUG94_RS13515	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
MUG94_RS13525	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUG94_RS13530	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
MUG94_RS13540	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MUG94_RS13550	COG0456	acetyltransferase
MUG94_RS13550	COG1214	PFAM Peptidase M22, glycoprotease
MUG94_RS13555	COG0802	atpase or kinase
MUG94_RS13560	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUG94_RS13565	COG0667	Aldo Keto reductase
MUG94_RS13590	COG0736	holo-[acyl-carrier-protein] synthase activity
MUG94_RS13595	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MUG94_RS13600	COG1072	(Pantothenic acid kinase))
MUG94_RS13605	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUG94_RS13610	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MUG94_RS13615	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MUG94_RS13620	COG0101	tRNA pseudouridine synthase activity
MUG94_RS13625	COG0203	ribosomal protein L17
MUG94_RS13630	COG0202	RNA polymerase activity
MUG94_RS13635	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MUG94_RS13640	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MUG94_RS13645	COG0257	Belongs to the bacterial ribosomal protein bL36 family
MUG94_RS13650	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
MUG94_RS13660	COG0563	adenylate kinase activity
MUG94_RS13670	COG0200	Binds to the 23S rRNA
MUG94_RS13675	COG1841	ribosomal large subunit assembly
MUG94_RS13680	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MUG94_RS13690	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MUG94_RS13695	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MUG94_RS13700	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MUG94_RS13705	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MUG94_RS13710	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MUG94_RS13715	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MUG94_RS13720	COG0255	Belongs to the universal ribosomal protein uL29 family
MUG94_RS13725	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MUG94_RS13730	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MUG94_RS13735	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MUG94_RS13740	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MUG94_RS13745	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MUG94_RS13750	COG0089	rRNA binding
MUG94_RS13755	COG0088	Forms part of the polypeptide exit tunnel
MUG94_RS13760	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MUG94_RS13765	COG0051	transcription antitermination factor activity, RNA binding
MUG94_RS13775	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MUG94_RS13780	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MUG94_RS13785	COG0049	tRNA binding
MUG94_RS13790	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MUG94_RS13795	COG1414	Transcriptional regulator
MUG94_RS13800	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MUG94_RS13810	COG0183	Belongs to the thiolase family
MUG94_RS13815	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MUG94_RS13830	COG3485	protocatechuate 3,4-dioxygenase
MUG94_RS13835	COG3485	protocatechuate 3,4-dioxygenase
MUG94_RS13850	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MUG94_RS13855	COG0085	RNA polymerase activity
MUG94_RS13865	COG0222	ribosome binding
MUG94_RS13870	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MUG94_RS13880	COG0081	regulation of translation
MUG94_RS13885	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MUG94_RS13890	COG0250	Participates in transcription elongation, termination and antitermination
MUG94_RS13895	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUG94_RS13905	COG0436	Aminotransferase
MUG94_RS13910	COG2197	response regulator
MUG94_RS13955	COG3485	protocatechuate 3,4-dioxygenase
MUG94_RS13965	COG0745	RESPONSE REGULATOR receiver
MUG94_RS13970	COG0456	acetyltransferase
MUG94_RS13975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
MUG94_RS13985	COG1528	Iron-storage protein
MUG94_RS13990	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
MUG94_RS13995	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MUG94_RS14000	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MUG94_RS14015	COG0812	UDP-N-acetylmuramate dehydrogenase activity
MUG94_RS14025	COG2030	dehydratase
MUG94_RS14040	COG0693	protein deglycase activity
MUG94_RS14060	COG0515	serine threonine protein kinase
MUG94_RS14060	COG2815	serine threonine protein kinase
MUG94_RS14080	COG1228	amidohydrolase
MUG94_RS14105	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS14115	COG1063	alcohol dehydrogenase
MUG94_RS14120	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUG94_RS14135	COG1666	GTP binding
MUG94_RS14165	COG0406	alpha-ribazole phosphatase activity
MUG94_RS14170	COG0501	Belongs to the peptidase M48B family
MUG94_RS14180	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUG94_RS14220	COG1233	COG1233 Phytoene dehydrogenase and related
MUG94_RS14230	COG0142	geranyltranstransferase activity
MUG94_RS14235	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
MUG94_RS14250	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUG94_RS14335	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS14365	COG0142	geranyltranstransferase activity
MUG94_RS14375	COG2226	methyltransferase
MUG94_RS14385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUG94_RS14390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUG94_RS14395	COG0765	amino acid transport
MUG94_RS14400	COG1126	abc transporter atp-binding protein
MUG94_RS14405	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
MUG94_RS14410	COG0028	Belongs to the TPP enzyme family
MUG94_RS14415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUG94_RS14420	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUG94_RS14425	COG0028	Belongs to the TPP enzyme family
MUG94_RS14430	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUG94_RS14435	COG1113	amino acid transport
MUG94_RS14440	COG1476	TRANSCRIPTIONal
MUG94_RS14470	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUG94_RS14485	COG1937	Protein conserved in bacteria
MUG94_RS14515	COG4948	Mandelate Racemase Muconate Lactonizing
MUG94_RS14535	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUG94_RS14540	COG0022	dehydrogenase e1 component
MUG94_RS14560	COG2837	iron assimilation
MUG94_RS14580	COG1024	Enoyl-CoA hydratase
MUG94_RS14585	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUG94_RS14590	COG2151	metal-sulfur cluster biosynthetic enzyme
MUG94_RS14595	COG3396	Phenylacetate-CoA oxygenase
MUG94_RS14600	COG3460	Phenylacetate-CoA oxygenase
MUG94_RS14605	COG3396	Phenylacetate-CoA oxygenase
MUG94_RS14625	COG0586	Pfam SNARE associated Golgi protein
MUG94_RS14640	COG1309	transcriptional regulator
MUG94_RS14645	COG2030	dehydratase
MUG94_RS14645	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS14660	COG1793	dna ligase
MUG94_RS14670	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS14680	COG2365	Tyrosine phosphatase family
MUG94_RS14685	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUG94_RS14690	COG1024	Enoyl-CoA hydratase
MUG94_RS14710	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MUG94_RS14750	COG1140	nitrate reductase beta subunit
MUG94_RS14760	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUG94_RS14785	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MUG94_RS14795	COG0785	Cytochrome C biogenesis protein
MUG94_RS14805	COG0406	alpha-ribazole phosphatase activity
MUG94_RS14810	COG2353	YceI-like domain
MUG94_RS14825	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
MUG94_RS14850	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MUG94_RS14855	COG0640	Transcriptional regulator
MUG94_RS14860	COG0123	including yeast histone deacetylase and acetoin utilization protein
MUG94_RS14865	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUG94_RS14875	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUG94_RS14880	COG1082	Xylose isomerase domain protein TIM barrel
MUG94_RS14885	COG0248	Ppx GppA phosphatase
MUG94_RS14890	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUG94_RS14890	COG1754	DNA topoisomerase type I activity
MUG94_RS14895	COG2890	protein-(glutamine-N5) methyltransferase activity
MUG94_RS14900	COG1053	succinate dehydrogenase
MUG94_RS14905	COG1054	Belongs to the UPF0176 family
MUG94_RS14915	COG1111	helicase
MUG94_RS14915	COG1205	dead DEAH box helicase
MUG94_RS14965	COG4585	Histidine kinase
MUG94_RS14970	COG2197	response regulator
MUG94_RS15005	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUG94_RS15010	COG1764	response to oxidative stress
MUG94_RS15020	COG0477	Major facilitator Superfamily
MUG94_RS15025	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
MUG94_RS15055	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUG94_RS15060	COG1408	metallophosphoesterase
MUG94_RS15065	COG1132	(ABC) transporter
MUG94_RS15070	COG1132	(ABC) transporter
MUG94_RS15090	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
MUG94_RS15095	COG0151	Belongs to the GarS family
MUG94_RS15125	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
MUG94_RS15150	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUG94_RS15155	COG0768	penicillin binding
MUG94_RS15180	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MUG94_RS15195	COG0789	Transcriptional regulator
MUG94_RS15200	COG0484	heat shock protein binding
MUG94_RS15205	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MUG94_RS15210	COG0443	Heat shock 70 kDa protein
MUG94_RS15220	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUG94_RS15230	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUG94_RS15245	COG1122	ATPase activity
MUG94_RS15265	COG2212	antiporter activity
MUG94_RS15275	COG0651	ATP synthesis coupled electron transport
MUG94_RS15280	COG1006	Multisubunit Na H antiporter MnhC subunit
MUG94_RS15285	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUG94_RS15285	COG2111	Na H antiporter
MUG94_RS15295	COG0717	Belongs to the dCTP deaminase family
MUG94_RS15300	COG3483	tryptophan 2,3-dioxygenase activity
MUG94_RS15365	COG0776	regulation of translation
MUG94_RS15370	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUG94_RS15375	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUG94_RS15380	COG0227	Belongs to the bacterial ribosomal protein bL28 family
MUG94_RS15385	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
MUG94_RS15390	COG1846	Transcriptional regulator
MUG94_RS15395	COG0477	Major facilitator Superfamily
MUG94_RS15405	COG1803	Methylglyoxal synthase
MUG94_RS15405	COG1597	lipid kinase activity
MUG94_RS15410	COG1196	nuclear chromosome segregation
MUG94_RS15410	COG0741	lytic transglycosylase activity
MUG94_RS15410	COG0739	heme binding
MUG94_RS15420	COG1120	ATPase activity
MUG94_RS15425	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUG94_RS15430	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUG94_RS15435	COG0435	Glutathione S-transferase
MUG94_RS15445	COG0492	ferredoxin-NADP+ reductase activity
MUG94_RS15450	COG1113	amino acid transport
MUG94_RS15455	COG1295	ribonuclease BN
MUG94_RS15475	COG2146	nitrite reductase [NAD(P)H] activity
MUG94_RS15495	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS15510	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
MUG94_RS15525	COG1414	Transcriptional regulator
MUG94_RS15555	COG0183	Belongs to the thiolase family
MUG94_RS15560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUG94_RS15565	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUG94_RS15590	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS15625	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUG94_RS15640	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS15650	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS15670	COG1476	TRANSCRIPTIONal
MUG94_RS15680	COG1473	amidohydrolase
MUG94_RS15685	COG4585	Histidine kinase
MUG94_RS15690	COG2197	response regulator
MUG94_RS15695	COG4152	abc transporter atp-binding protein
MUG94_RS15755	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS15760	COG0583	DNA-binding transcription factor activity
MUG94_RS15770	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS15780	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
MUG94_RS15790	COG4221	oxidoreductase activity
MUG94_RS15800	COG2755	lipolytic protein G-D-S-L family
MUG94_RS15820	COG0028	Belongs to the TPP enzyme family
MUG94_RS15825	COG2610	gluconate transmembrane transporter activity
MUG94_RS15840	COG1012	belongs to the aldehyde dehydrogenase family
MUG94_RS15845	COG2860	membrane
MUG94_RS15890	COG0577	efflux transmembrane transporter activity
MUG94_RS15895	COG1136	(ABC) transporter
MUG94_RS15935	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUG94_RS15965	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MUG94_RS15985	COG1072	(Pantothenic acid kinase))
MUG94_RS16005	COG3386	PFAM SMP-30 Gluconolaconase
MUG94_RS16020	COG0531	amino acid
MUG94_RS16065	COG0492	ferredoxin-NADP+ reductase activity
MUG94_RS16165	COG1414	Transcriptional regulator
MUG94_RS16170	COG2217	Heavy metal translocating P-type atpase
MUG94_RS16175	COG0598	Magnesium transport protein CorA
MUG94_RS16190	COG0477	Major facilitator Superfamily
MUG94_RS16200	COG3546	catalase activity
MUG94_RS16205	COG1960	acyl-CoA dehydrogenase activity
MUG94_RS16225	COG1028	Short-chain dehydrogenase reductase Sdr
MUG94_RS16230	COG2814	Major facilitator Superfamily
MUG94_RS16235	COG0589	response to stress
MUG94_RS16240	COG0477	Major facilitator Superfamily
MUG94_RS16250	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
MUG94_RS16260	COG2301	Belongs to the HpcH HpaI aldolase family
MUG94_RS16265	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUG94_RS16270	COG3257	ureidoglycine aminohydrolase activity
MUG94_RS16280	COG2233	PERMEase
MUG94_RS16310	COG3608	succinylglutamate desuccinylase aspartoacylase
MUG94_RS16310	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
MUG94_RS16320	COG1529	Aldehyde oxidase and xanthine dehydrogenase
MUG94_RS16335	COG0277	FAD linked oxidase domain protein
MUG94_RS16340	COG1620	l-lactate permease
MUG94_RS16345	COG1115	amino acid carrier protein
MUG94_RS16360	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MUG94_RS16365	COG0509	glycine decarboxylation via glycine cleavage system
MUG94_RS16370	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUG94_RS16375	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUG94_RS16375	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUG94_RS16380	COG1113	amino acid transport
MUG94_RS16395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUG94_RS16420	COG1302	Protein conserved in bacteria
MUG94_RS16445	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
MUG94_RS16460	COG0686	Belongs to the AlaDH PNT family
MUG94_RS16500	COG2197	response regulator
MUG94_RS16505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUG94_RS16515	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUG94_RS16520	COG0022	dehydrogenase e1 component
MUG94_RS16530	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUG94_RS16535	COG1950	PFAM Membrane protein of
MUG94_RS16550	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MUG94_RS16560	COG0820	rRNA (adenine-C2-)-methyltransferase activity
MUG94_RS16570	COG0590	tRNA wobble adenosine to inosine editing
MUG94_RS16585	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUG94_RS16600	COG2080	2 iron, 2 sulfur cluster binding
MUG94_RS16605	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
MUG94_RS16610	COG1529	Aldehyde oxidase and xanthine dehydrogenase
MUG94_RS16665	COG0667	Aldo Keto reductase
MUG94_RS16670	COG2409	Drug exporters of the RND superfamily
MUG94_RS16680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUG94_RS16685	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUG94_RS16690	COG1802	Transcriptional regulator
MUG94_RS16705	COG2368	4-hydroxyphenylacetate
MUG94_RS16730	COG0583	DNA-binding transcription factor activity
MUG94_RS16735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUG94_RS16740	COG0477	Major facilitator Superfamily
MUG94_RS16750	COG0657	acetylesterase activity
MUG94_RS16785	COG2814	Major facilitator Superfamily
MUG94_RS16830	COG3145	DNA-N1-methyladenine dioxygenase activity
MUG94_RS16835	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUG94_RS16835	COG2169	Transcriptional regulator
MUG94_RS16845	COG0659	secondary active sulfate transmembrane transporter activity
MUG94_RS16870	COG0318	PFAM AMP-dependent synthetase and ligase
MUG94_RS16915	COG2814	Major facilitator Superfamily
MUG94_RS16935	COG1652	LysM domain
MUG94_RS16940	COG0531	amino acid
MUG94_RS16950	COG0305	Participates in initiation and elongation during chromosome replication
MUG94_RS16955	COG0359	binds to the 23S rRNA
MUG94_RS16960	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MUG94_RS16970	COG0360	Binds together with S18 to 16S ribosomal RNA
MUG94_RS16975	COG1362	aminopeptidase activity
MUG94_RS16985	COG1131	(ABC) transporter
MUG94_RS17010	COG0738	Major facilitator superfamily
MUG94_RS17015	COG0488	(ABC) transporter
MUG94_RS17050	COG2759	Belongs to the formate--tetrahydrofolate ligase family
MUG94_RS17055	COG0438	transferase activity, transferring glycosyl groups
MUG94_RS17065	COG0406	alpha-ribazole phosphatase activity
MUG94_RS17070	COG0617	tRNA 3'-terminal CCA addition
MUG94_RS17090	COG0492	ferredoxin-NADP+ reductase activity
MUG94_RS17095	COG3118	belongs to the thioredoxin family
MUG94_RS17100	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUG94_RS17100	COG3409	Peptidoglycan-binding domain 1 protein
MUG94_RS17105	COG1215	transferase activity, transferring glycosyl groups
MUG94_RS17140	COG1192	Involved in chromosome partitioning
MUG94_RS17145	COG0357	Ribosomal RNA small subunit methyltransferase G
MUG94_RS17155	COG0706	membrane insertase activity
MUG94_RS17165	COG0594	ribonuclease P activity
MUG94_RS17170	COG0230	Belongs to the bacterial ribosomal protein bL34 family