locus-tag class description AP9108_RS00015 PF00535 Glycosyl transferase family 2 AP9108_RS00145 PF03471 Transporter associated domain AP9108_RS00145 PF01595 Cyclin M transmembrane N-terminal domain AP9108_RS00145 PF00571 CBS domain AP9108_RS00160 PF13439 Glycosyltransferase Family 4 AP9108_RS00160 PF00534 Glycosyl transferases group 1 AP9108_RS00175 PF02390 Putative methyltransferase AP9108_RS00190 PF02374 Anion-transporting ATPase AP9108_RS00205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AP9108_RS00205 PF07685 CobB/CobQ-like glutamine amidotransferase domain AP9108_RS00220 PF02225 PA domain AP9108_RS00220 PF04389 Peptidase family M28 AP9108_RS00230 PF00427 Phycobilisome Linker polypeptide AP9108_RS00230 PF00502 Phycobilisome protein AP9108_RS00235 PF09335 SNARE associated Golgi protein AP9108_RS00240 PF01740 STAS domain AP9108_RS00260 PF17676 LD-carboxypeptidase C-terminal domain AP9108_RS00260 PF02016 LD-carboxypeptidase N-terminal domain AP9108_RS00285 PF17746 SfsA N-terminal OB domain AP9108_RS00285 PF03749 Sugar fermentation stimulation protein RE domain AP9108_RS00325 PF00128 Alpha amylase, catalytic domain AP9108_RS00325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AP9108_RS00330 PF09179 TilS substrate binding domain AP9108_RS00330 PF01171 PP-loop family AP9108_RS00335 PF00535 Glycosyl transferase family 2 AP9108_RS00345 PF08502 LeuA allosteric (dimerisation) domain AP9108_RS00345 PF00682 HMGL-like AP9108_RS00355 PF00072 Response regulator receiver domain AP9108_RS00355 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS00365 PF00166 Chaperonin 10 Kd subunit AP9108_RS00370 PF00118 TCP-1/cpn60 chaperonin family AP9108_RS00395 PF01078 Magnesium chelatase, subunit ChlI AP9108_RS00395 PF17863 AAA lid domain AP9108_RS00400 PF02075 Crossover junction endodeoxyribonuclease RuvC AP9108_RS00415 PF01327 Polypeptide deformylase AP9108_RS00440 PF01940 Integral membrane protein DUF92 AP9108_RS00455 PF03912 Psb28 protein AP9108_RS00480 PF00005 ABC transporter AP9108_RS00485 PF02527 rRNA small subunit methyltransferase G AP9108_RS00500 PF01343 Peptidase family S49 AP9108_RS00505 PF00892 EamA-like transporter family AP9108_RS00510 PF11941 Domain of unknown function (DUF3459) AP9108_RS00510 PF00128 Alpha amylase, catalytic domain AP9108_RS00515 PF00128 Alpha amylase, catalytic domain AP9108_RS00520 PF04002 RadC-like JAB domain AP9108_RS00555 PF02678 Pirin AP9108_RS00555 PF17954 Quercetinase C-terminal cupin domain AP9108_RS00570 PF08003 Protein of unknown function (DUF1698) AP9108_RS00575 PF13649 Methyltransferase domain AP9108_RS00580 PF01810 LysE type translocator AP9108_RS00585 PF04199 Putative cyclase AP9108_RS00600 PF01136 Peptidase family U32 AP9108_RS00600 PF16325 Peptidase family U32 C-terminal domain AP9108_RS00610 PF00106 short chain dehydrogenase AP9108_RS00615 PF00155 Aminotransferase class I and II AP9108_RS00625 PF00520 Ion transport protein AP9108_RS00625 PF00027 Cyclic nucleotide-binding domain AP9108_RS00630 PF13180 PDZ domain AP9108_RS00640 PF01556 DnaJ C terminal domain AP9108_RS00640 PF00226 DnaJ domain AP9108_RS00645 PF00011 Hsp20/alpha crystallin family AP9108_RS00655 PF01641 SelR domain AP9108_RS00680 PF00390 Malic enzyme, N-terminal domain AP9108_RS00680 PF03949 Malic enzyme, NAD binding domain AP9108_RS00700 PF00534 Glycosyl transferases group 1 AP9108_RS00700 PF13439 Glycosyltransferase Family 4 AP9108_RS00725 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AP9108_RS00725 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AP9108_RS00730 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AP9108_RS00750 PF01654 Cytochrome bd terminal oxidase subunit I AP9108_RS00770 PF00106 short chain dehydrogenase AP9108_RS00785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AP9108_RS00785 PF00270 DEAD/DEAH box helicase AP9108_RS00785 PF00271 Helicase conserved C-terminal domain AP9108_RS00785 PF18074 Primosomal protein N C-terminal domain AP9108_RS00785 PF17764 3′ DNA-binding domain (3′BD) AP9108_RS00790 PF00483 Nucleotidyl transferase AP9108_RS00810 PF00128 Alpha amylase, catalytic domain AP9108_RS00810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AP9108_RS00815 PF01259 SAICAR synthetase AP9108_RS00820 PF01103 Surface antigen AP9108_RS00820 PF07244 Surface antigen variable number repeat AP9108_RS00830 PF16124 RecQ zinc-binding AP9108_RS00830 PF00271 Helicase conserved C-terminal domain AP9108_RS00830 PF00270 DEAD/DEAH box helicase AP9108_RS00840 PF00270 DEAD/DEAH box helicase AP9108_RS00840 PF00271 Helicase conserved C-terminal domain AP9108_RS00840 PF00570 HRDC domain AP9108_RS00840 PF16124 RecQ zinc-binding AP9108_RS00840 PF09382 RQC domain AP9108_RS00865 PF00360 Phytochrome region AP9108_RS00865 PF08446 PAS fold AP9108_RS00865 PF01590 GAF domain AP9108_RS00865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS00865 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS00890 PF05552 Conserved TM helix AP9108_RS01040 PF13369 Transglutaminase-like superfamily AP9108_RS01055 PF03742 PetN AP9108_RS01100 PF00005 ABC transporter AP9108_RS01110 PF04485 Phycobilisome degradation protein nblA AP9108_RS01190 PF01300 Telomere recombination AP9108_RS01200 PF01040 UbiA prenyltransferase family AP9108_RS01215 PF17969 L,D-transpeptidase C-terminal domain AP9108_RS01215 PF03734 L,D-transpeptidase catalytic domain AP9108_RS01220 PF06298 Photosystem II protein Y (PsbY) AP9108_RS01225 PF02033 Ribosome-binding factor A AP9108_RS01230 PF00933 Glycosyl hydrolase family 3 N terminal domain AP9108_RS01230 PF01915 Glycosyl hydrolase family 3 C-terminal domain AP9108_RS01240 PF01964 Radical SAM ThiC family AP9108_RS01265 PF00963 Cohesin domain AP9108_RS01265 PF00395 S-layer homology domain AP9108_RS01270 PF03572 Peptidase family S41 AP9108_RS01270 PF00595 PDZ domain AP9108_RS01280 PF00072 Response regulator receiver domain AP9108_RS01280 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS01285 PF01925 Sulfite exporter TauE/SafE AP9108_RS01290 PF03069 Acetamidase/Formamidase family AP9108_RS01290 PF03069 Acetamidase/Formamidase family AP9108_RS01295 PF12795 Mechanosensitive ion channel porin domain AP9108_RS01295 PF00924 Mechanosensitive ion channel AP9108_RS01295 PF12794 Mechanosensitive ion channel inner membrane domain 1 AP9108_RS01320 PF00936 BMC domain AP9108_RS01330 PF00152 tRNA synthetases class II (D, K and N) AP9108_RS01330 PF01336 OB-fold nucleic acid binding domain AP9108_RS01335 PF01494 FAD binding domain AP9108_RS01355 PF14602 Hexapeptide repeat of succinyl-transferase AP9108_RS01355 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AP9108_RS01355 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS01390 PF07465 Photosystem I protein M (PsaM) AP9108_RS01395 PF00334 Nucleoside diphosphate kinase AP9108_RS01400 PF00005 ABC transporter AP9108_RS01400 PF03459 TOBE domain AP9108_RS01420 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS01425 PF00072 Response regulator receiver domain AP9108_RS01425 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS01430 PF01627 Hpt domain AP9108_RS01430 PF00072 Response regulator receiver domain AP9108_RS01430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS01430 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS01430 PF00672 HAMP domain AP9108_RS01435 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS01435 PF00989 PAS fold AP9108_RS01450 PF00534 Glycosyl transferases group 1 AP9108_RS01450 PF08323 Starch synthase catalytic domain AP9108_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS01460 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS01460 PF00989 PAS fold AP9108_RS01465 PF13460 NAD(P)H-binding AP9108_RS01470 PF01145 SPFH domain / Band 7 family AP9108_RS01490 PF00578 AhpC/TSA family AP9108_RS01495 PF13282 Domain of unknown function (DUF4070) AP9108_RS01495 PF02310 B12 binding domain AP9108_RS01495 PF04055 Radical SAM superfamily AP9108_RS01500 PF01791 DeoC/LacD family aldolase AP9108_RS01510 PF09519 HindVP restriction endonuclease AP9108_RS01515 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS01540 PF01008 Initiation factor 2 subunit family AP9108_RS01565 PF16320 Ribosomal protein L7/L12 dimerisation domain AP9108_RS01565 PF00542 Ribosomal protein L7/L12 C-terminal domain AP9108_RS01570 PF00466 Ribosomal protein L10 AP9108_RS01575 PF00687 Ribosomal protein L1p/L10e family AP9108_RS01580 PF00298 Ribosomal protein L11, RNA binding domain AP9108_RS01580 PF03946 Ribosomal protein L11, N-terminal domain AP9108_RS01585 PF02357 Transcription termination factor nusG AP9108_RS01585 PF00467 KOW motif AP9108_RS01590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AP9108_RS01600 PF01245 Ribosomal protein L19 AP9108_RS01605 PF02091 Glycyl-tRNA synthetase alpha subunit AP9108_RS01625 PF07689 KaiB domain AP9108_RS01625 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS01630 PF12323 Helix-turn-helix domain AP9108_RS01630 PF07282 Putative transposase DNA-binding domain AP9108_RS01630 PF01385 Probable transposase AP9108_RS01635 PF00293 NUDIX domain AP9108_RS01640 PF04545 Sigma-70, region 4 AP9108_RS01640 PF04539 Sigma-70 region 3 AP9108_RS01640 PF04542 Sigma-70 region 2 AP9108_RS01640 PF00140 Sigma-70 factor, region 1.2 AP9108_RS01650 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS01655 PF12911 N-terminal TM domain of oligopeptide transport permease C AP9108_RS01655 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS01710 PF01385 Probable transposase AP9108_RS01710 PF07282 Putative transposase DNA-binding domain AP9108_RS01710 PF12323 Helix-turn-helix domain AP9108_RS01775 PF00300 Histidine phosphatase superfamily (branch 1) AP9108_RS01780 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AP9108_RS01780 PF05221 S-adenosyl-L-homocysteine hydrolase AP9108_RS01785 PF06055 Exopolysaccharide synthesis, ExoD AP9108_RS01795 PF01547 Bacterial extracellular solute-binding protein AP9108_RS01800 PF00156 Phosphoribosyl transferase domain AP9108_RS01800 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AP9108_RS01815 PF04055 Radical SAM superfamily AP9108_RS01820 PF02901 Pyruvate formate lyase-like AP9108_RS01820 PF01228 Glycine radical AP9108_RS01825 PF01230 HIT domain AP9108_RS01855 PF03551 Transcriptional regulator PadR-like family AP9108_RS01860 PF00529 HlyD membrane-fusion protein of T1SS AP9108_RS01860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AP9108_RS01865 PF00873 AcrB/AcrD/AcrF family AP9108_RS01870 PF01169 Uncharacterized protein family UPF0016 AP9108_RS01880 PF02446 4-alpha-glucanotransferase AP9108_RS01885 PF13464 Domain of unknown function (DUF4115) AP9108_RS01890 PF00849 RNA pseudouridylate synthase AP9108_RS01890 PF01479 S4 domain AP9108_RS01905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS01910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AP9108_RS01910 PF01276 Orn/Lys/Arg decarboxylase, major domain AP9108_RS01915 PF06071 Protein of unknown function (DUF933) AP9108_RS01915 PF01926 50S ribosome-binding GTPase AP9108_RS01920 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AP9108_RS01930 PF13335 Magnesium chelatase, subunit ChlI C-terminal AP9108_RS01930 PF01078 Magnesium chelatase, subunit ChlI AP9108_RS01935 PF17862 AAA+ lid domain AP9108_RS01935 PF06480 FtsH Extracellular AP9108_RS01935 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS01935 PF01434 Peptidase family M41 AP9108_RS01940 PF01384 Phosphate transporter family AP9108_RS01955 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS01985 PF00664 ABC transporter transmembrane region AP9108_RS01985 PF00005 ABC transporter AP9108_RS01985 PF03412 Peptidase C39 family AP9108_RS02045 PF01348 Type II intron maturase AP9108_RS02045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS02050 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AP9108_RS02075 PF03683 Uncharacterised protein family (UPF0175) AP9108_RS02125 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AP9108_RS02170 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS02195 PF00144 Beta-lactamase AP9108_RS02210 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AP9108_RS02215 PF04029 2-phosphosulpholactate phosphatase AP9108_RS02220 PF00400 WD domain, G-beta repeat AP9108_RS02220 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AP9108_RS02230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AP9108_RS02230 PF02806 Alpha amylase, C-terminal all-beta domain AP9108_RS02230 PF00128 Alpha amylase, catalytic domain AP9108_RS02370 PF03793 PASTA domain AP9108_RS02370 PF03717 Penicillin-binding Protein dimerisation domain AP9108_RS02370 PF00905 Penicillin binding protein transpeptidase domain AP9108_RS02375 PF00753 Metallo-beta-lactamase superfamily AP9108_RS02380 PF00890 FAD binding domain AP9108_RS02380 PF02910 Fumarate reductase flavoprotein C-term AP9108_RS02410 PF03738 Glutathionylspermidine synthase preATP-grasp AP9108_RS02465 PF01544 CorA-like Mg2+ transporter protein AP9108_RS02470 PF00069 Protein kinase domain AP9108_RS02475 PF01066 CDP-alcohol phosphatidyltransferase AP9108_RS02525 PF01960 ArgJ family AP9108_RS02590 PF00805 Pentapeptide repeats (8 copies) AP9108_RS02590 PF00069 Protein kinase domain AP9108_RS02600 PF07478 D-ala D-ala ligase C-terminus AP9108_RS02600 PF01820 D-ala D-ala ligase N-terminus AP9108_RS02615 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain AP9108_RS02625 PF00085 Thioredoxin AP9108_RS02700 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS02700 PF01381 Helix-turn-helix AP9108_RS02745 PF00563 EAL domain AP9108_RS02745 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS02745 PF00360 Phytochrome region AP9108_RS02745 PF01590 GAF domain AP9108_RS02750 PF00483 Nucleotidyl transferase AP9108_RS02750 PF01050 Mannose-6-phosphate isomerase AP9108_RS02755 PF16916 Dimerisation domain of Zinc Transporter AP9108_RS02755 PF01545 Cation efflux family AP9108_RS02770 PF13614 AAA domain AP9108_RS02780 PF01578 Cytochrome C assembly protein AP9108_RS02800 PF01722 BolA-like protein AP9108_RS02805 PF00462 Glutaredoxin AP9108_RS02815 PF00072 Response regulator receiver domain AP9108_RS02815 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS02820 PF00171 Aldehyde dehydrogenase family AP9108_RS02845 PF00072 Response regulator receiver domain AP9108_RS02845 PF01627 Hpt domain AP9108_RS02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS02845 PF01584 CheW-like domain AP9108_RS02845 PF02895 Signal transducing histidine kinase, homodimeric domain AP9108_RS02850 PF00672 HAMP domain AP9108_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS02850 PF18698 Histidine kinase sensor domain AP9108_RS02850 PF00989 PAS fold AP9108_RS02850 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS02880 PF01427 D-ala-D-ala dipeptidase AP9108_RS02890 PF06206 CpeT/CpcT family (DUF1001) AP9108_RS02895 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS02910 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AP9108_RS02910 PF00361 Proton-conducting membrane transporter AP9108_RS02910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP9108_RS02930 PF03631 Virulence factor BrkB AP9108_RS02940 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS02950 PF00487 Fatty acid desaturase AP9108_RS02960 PF02913 FAD linked oxidases, C-terminal domain AP9108_RS02960 PF01565 FAD binding domain AP9108_RS02965 PF00591 Glycosyl transferase family, a/b domain AP9108_RS02965 PF02885 Glycosyl transferase family, helical bundle domain AP9108_RS02970 PF12008 Type I restriction and modification enzyme - subunit R C terminal AP9108_RS02970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS02970 PF18766 SWI2/SNF2 ATPase AP9108_RS02980 PF13476 AAA domain AP9108_RS02990 PF12161 HsdM N-terminal domain AP9108_RS02990 PF02384 N-6 DNA Methylase AP9108_RS02995 PF13180 PDZ domain AP9108_RS03000 PF00395 S-layer homology domain AP9108_RS03000 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS03005 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS03005 PF00395 S-layer homology domain AP9108_RS03010 PF13180 PDZ domain AP9108_RS03020 PF00072 Response regulator receiver domain AP9108_RS03020 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS03020 PF01627 Hpt domain AP9108_RS03035 PF14306 PUA-like domain AP9108_RS03035 PF01747 ATP-sulfurylase AP9108_RS03165 PF09308 LuxQ, periplasmic AP9108_RS03165 PF00072 Response regulator receiver domain AP9108_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS03165 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS03170 PF00672 HAMP domain AP9108_RS03170 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS03185 PF00563 EAL domain AP9108_RS03185 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS03185 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS03190 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS03190 PF02743 Cache domain AP9108_RS03210 PF00672 HAMP domain AP9108_RS03210 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS03215 PF02342 TerD domain AP9108_RS03220 PF02342 TerD domain AP9108_RS03225 PF01327 Polypeptide deformylase AP9108_RS03230 PF13180 PDZ domain AP9108_RS03235 PF00308 Bacterial dnaA protein AP9108_RS03235 PF08299 Bacterial dnaA protein helix-turn-helix AP9108_RS03235 PF11638 DnaA N-terminal domain AP9108_RS03240 PF00176 SNF2 family N-terminal domain AP9108_RS03240 PF00271 Helicase conserved C-terminal domain AP9108_RS03245 PF17827 PrmC N-terminal domain AP9108_RS03245 PF05175 Methyltransferase small domain AP9108_RS03265 PF11016 Protein of unknown function (DUF2854) AP9108_RS03275 PF01385 Probable transposase AP9108_RS03275 PF12323 Helix-turn-helix domain AP9108_RS03275 PF07282 Putative transposase DNA-binding domain AP9108_RS03280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AP9108_RS03280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AP9108_RS03290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP9108_RS03290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AP9108_RS03310 PF01521 Iron-sulphur cluster biosynthesis AP9108_RS03330 PF00535 Glycosyl transferase family 2 AP9108_RS03335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AP9108_RS03335 PF00953 Glycosyl transferase family 4 AP9108_RS03345 PF00005 ABC transporter AP9108_RS03355 PF01208 Uroporphyrinogen decarboxylase (URO-D) AP9108_RS03370 PF01106 NifU-like domain AP9108_RS03375 PF01627 Hpt domain AP9108_RS03375 PF00072 Response regulator receiver domain AP9108_RS03375 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS03380 PF00672 HAMP domain AP9108_RS03380 PF13426 PAS domain AP9108_RS03380 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS03380 PF14827 Double sensory domain of two-component sensor kinase AP9108_RS03385 PF00072 Response regulator receiver domain AP9108_RS03385 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS03390 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS03390 PF00072 Response regulator receiver domain AP9108_RS03415 PF01717 Cobalamin-independent synthase, Catalytic domain AP9108_RS03415 PF08267 Cobalamin-independent synthase, N-terminal domain AP9108_RS03425 PF00487 Fatty acid desaturase AP9108_RS03440 PF08241 Methyltransferase domain AP9108_RS03465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS03465 PF01348 Type II intron maturase AP9108_RS03490 PF01098 Cell cycle protein AP9108_RS03495 PF08448 PAS fold AP9108_RS03495 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS03495 PF00072 Response regulator receiver domain AP9108_RS03495 PF13188 PAS domain AP9108_RS03505 PF00156 Phosphoribosyl transferase domain AP9108_RS03515 PF03572 Peptidase family S41 AP9108_RS03515 PF00595 PDZ domain AP9108_RS03520 PF04551 GcpE protein AP9108_RS03545 PF00588 SpoU rRNA Methylase family AP9108_RS03555 PF01112 Asparaginase AP9108_RS03560 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS03560 PF00072 Response regulator receiver domain AP9108_RS03565 PF07194 P2 response regulator binding domain AP9108_RS03565 PF01627 Hpt domain AP9108_RS03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS03565 PF01584 CheW-like domain AP9108_RS03565 PF02895 Signal transducing histidine kinase, homodimeric domain AP9108_RS03570 PF01584 CheW-like domain AP9108_RS03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS03575 PF00672 HAMP domain AP9108_RS03585 PF01739 CheR methyltransferase, SAM binding domain AP9108_RS03590 PF00072 Response regulator receiver domain AP9108_RS03590 PF01339 CheB methylesterase AP9108_RS03605 PF09194 Restriction endonuclease BsobI AP9108_RS03615 PF05140 ResB-like family AP9108_RS03650 PF00905 Penicillin binding protein transpeptidase domain AP9108_RS03650 PF03717 Penicillin-binding Protein dimerisation domain AP9108_RS03665 PF04193 PQ loop repeat AP9108_RS03670 PF01788 PsbJ AP9108_RS03675 PF02419 PsbL protein AP9108_RS03680 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits AP9108_RS03685 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit AP9108_RS03685 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits AP9108_RS03690 PF14870 Photosynthesis system II assembly factor YCF48 AP9108_RS03695 PF00301 Rubredoxin AP9108_RS03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AP9108_RS03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AP9108_RS03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AP9108_RS03725 PF00675 Insulinase (Peptidase family M16) AP9108_RS03725 PF05193 Peptidase M16 inactive domain AP9108_RS03735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AP9108_RS03735 PF00586 AIR synthase related protein, N-terminal domain AP9108_RS03735 PF02769 AIR synthase related protein, C-terminal domain AP9108_RS03740 PF00156 Phosphoribosyl transferase domain AP9108_RS03745 PF00795 Carbon-nitrogen hydrolase AP9108_RS03750 PF00437 Type II/IV secretion system protein AP9108_RS03755 PF07689 KaiB domain AP9108_RS03765 PF00231 ATP synthase AP9108_RS03770 PF02874 ATP synthase alpha/beta family, beta-barrel domain AP9108_RS03770 PF00306 ATP synthase alpha/beta chain, C terminal domain AP9108_RS03770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AP9108_RS03775 PF00213 ATP synthase delta (OSCP) subunit AP9108_RS03780 PF00430 ATP synthase B/B' CF(0) AP9108_RS03785 PF00430 ATP synthase B/B' CF(0) AP9108_RS03790 PF00137 ATP synthase subunit C AP9108_RS03795 PF00119 ATP synthase A chain AP9108_RS03800 PF12966 N-ATPase, AtpR subunit AP9108_RS03805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP9108_RS03805 PF03129 Anticodon binding domain AP9108_RS03805 PF04073 Aminoacyl-tRNA editing domain AP9108_RS03810 PF10531 SLBB domain AP9108_RS03820 PF00266 Aminotransferase class-V AP9108_RS03825 PF00155 Aminotransferase class I and II AP9108_RS03830 PF02540 NAD synthase AP9108_RS03830 PF00795 Carbon-nitrogen hydrolase AP9108_RS03905 PF01348 Type II intron maturase AP9108_RS03905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS03935 PF05685 Putative restriction endonuclease AP9108_RS03940 PF05685 Putative restriction endonuclease AP9108_RS04270 PF01420 Type I restriction modification DNA specificity domain AP9108_RS04305 PF01348 Type II intron maturase AP9108_RS04305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS04315 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS04335 PF00140 Sigma-70 factor, region 1.2 AP9108_RS04335 PF04542 Sigma-70 region 2 AP9108_RS04335 PF04545 Sigma-70, region 4 AP9108_RS04335 PF04539 Sigma-70 region 3 AP9108_RS04340 PF01475 Ferric uptake regulator family AP9108_RS04345 PF01520 N-acetylmuramoyl-L-alanine amidase AP9108_RS04345 PF01471 Putative peptidoglycan binding domain AP9108_RS04360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP9108_RS04365 PF00111 2Fe-2S iron-sulfur cluster binding domain AP9108_RS04370 PF08486 Stage II sporulation protein AP9108_RS04380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AP9108_RS04380 PF02896 PEP-utilising enzyme, TIM barrel domain AP9108_RS04380 PF00391 PEP-utilising enzyme, mobile domain AP9108_RS04385 PF01638 HxlR-like helix-turn-helix AP9108_RS04410 PF01381 Helix-turn-helix AP9108_RS04415 PF01743 Poly A polymerase head domain AP9108_RS04415 PF00571 CBS domain AP9108_RS04475 PF13439 Glycosyltransferase Family 4 AP9108_RS04480 PF00535 Glycosyl transferase family 2 AP9108_RS04485 PF00535 Glycosyl transferase family 2 AP9108_RS04510 PF00005 ABC transporter AP9108_RS04515 PF00072 Response regulator receiver domain AP9108_RS04515 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS04555 PF01227 GTP cyclohydrolase I AP9108_RS04565 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS04565 PF07683 Cobalamin synthesis protein cobW C-terminal domain AP9108_RS04575 PF08240 Alcohol dehydrogenase GroES-like domain AP9108_RS04575 PF00107 Zinc-binding dehydrogenase AP9108_RS04585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AP9108_RS04585 PF00364 Biotin-requiring enzyme AP9108_RS04585 PF02817 e3 binding domain AP9108_RS04610 PF01740 STAS domain AP9108_RS04610 PF00916 Sulfate permease family AP9108_RS04615 PF00916 Sulfate permease family AP9108_RS04615 PF01740 STAS domain AP9108_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS04635 PF01979 Amidohydrolase family AP9108_RS04645 PF02915 Rubrerythrin AP9108_RS04650 PF13419 Haloacid dehalogenase-like hydrolase AP9108_RS04655 PF01209 ubiE/COQ5 methyltransferase family AP9108_RS04680 PF00400 WD domain, G-beta repeat AP9108_RS04680 PF00931 NB-ARC domain AP9108_RS04690 PF00180 Isocitrate/isopropylmalate dehydrogenase AP9108_RS04695 PF00582 Universal stress protein family AP9108_RS04700 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus AP9108_RS04700 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term AP9108_RS04710 PF14492 Elongation Factor G, domain II AP9108_RS04710 PF00679 Elongation factor G C-terminus AP9108_RS04710 PF03144 Elongation factor Tu domain 2 AP9108_RS04710 PF00009 Elongation factor Tu GTP binding domain AP9108_RS04720 PF02445 Quinolinate synthetase A protein AP9108_RS04730 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) AP9108_RS04740 PF01593 Flavin containing amine oxidoreductase AP9108_RS04780 PF01676 Metalloenzyme superfamily AP9108_RS04780 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AP9108_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS04790 PF01547 Bacterial extracellular solute-binding protein AP9108_RS04800 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS04800 PF00395 S-layer homology domain AP9108_RS04810 PF01668 SmpB protein AP9108_RS04815 PF10415 Fumarase C C-terminus AP9108_RS04815 PF00206 Lyase AP9108_RS04875 PF08546 Ketopantoate reductase PanE/ApbA C terminal AP9108_RS04875 PF02558 Ketopantoate reductase PanE/ApbA AP9108_RS04900 PF01571 Aminomethyltransferase folate-binding domain AP9108_RS04900 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP9108_RS04910 PF00072 Response regulator receiver domain AP9108_RS04910 PF01627 Hpt domain AP9108_RS04910 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS04915 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS04915 PF00072 Response regulator receiver domain AP9108_RS04935 PF00557 Metallopeptidase family M24 AP9108_RS04935 PF05195 Aminopeptidase P, N-terminal domain AP9108_RS04940 PF02575 YbaB/EbfC DNA-binding family AP9108_RS04945 PF01565 FAD binding domain AP9108_RS04945 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AP9108_RS04950 PF01225 Mur ligase family, catalytic domain AP9108_RS04950 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS04950 PF08245 Mur ligase middle domain AP9108_RS04955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP9108_RS04955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AP9108_RS04965 PF00425 chorismate binding enzyme AP9108_RS04975 PF00067 Cytochrome P450 AP9108_RS04980 PF01040 UbiA prenyltransferase family AP9108_RS04985 PF12161 HsdM N-terminal domain AP9108_RS04985 PF02384 N-6 DNA Methylase AP9108_RS04995 PF01420 Type I restriction modification DNA specificity domain AP9108_RS05035 PF00395 S-layer homology domain AP9108_RS05035 PF00963 Cohesin domain AP9108_RS05065 PF01809 Putative membrane protein insertion efficiency factor AP9108_RS05070 PF09157 Pseudouridine synthase II TruB, C-terminal AP9108_RS05070 PF01509 TruB family pseudouridylate synthase (N terminal domain) AP9108_RS05080 PF00005 ABC transporter AP9108_RS05100 PF00462 Glutaredoxin AP9108_RS05105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AP9108_RS05105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AP9108_RS05120 PF10369 Small subunit of acetolactate synthase AP9108_RS05125 PF00999 Sodium/hydrogen exchanger family AP9108_RS05130 PF00795 Carbon-nitrogen hydrolase AP9108_RS05135 PF01701 Photosystem I reaction centre subunit IX / PsaJ AP9108_RS05140 PF02507 Photosystem I reaction centre subunit III AP9108_RS05145 PF00814 Glycoprotease family AP9108_RS05155 PF01938 TRAM domain AP9108_RS05155 PF04055 Radical SAM superfamily AP9108_RS05155 PF00919 Uncharacterized protein family UPF0004 AP9108_RS05170 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS05170 PF00563 EAL domain AP9108_RS05170 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS05180 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS05180 PF00072 Response regulator receiver domain AP9108_RS05180 PF09308 LuxQ, periplasmic AP9108_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS05190 PF00300 Histidine phosphatase superfamily (branch 1) AP9108_RS05200 PF10502 Signal peptidase, peptidase S26 AP9108_RS05205 PF00106 short chain dehydrogenase AP9108_RS05210 PF01029 NusB family AP9108_RS05215 PF00448 SRP54-type protein, GTPase domain AP9108_RS05215 PF00448 SRP54-type protein, GTPase domain AP9108_RS05215 PF02881 SRP54-type protein, helical bundle domain AP9108_RS05215 PF02881 SRP54-type protein, helical bundle domain AP9108_RS05220 PF07228 Stage II sporulation protein E (SpoIIE) AP9108_RS05220 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AP9108_RS05230 PF14698 Argininosuccinate lyase C-terminal AP9108_RS05230 PF00206 Lyase AP9108_RS05265 PF00114 Pilin (bacterial filament) AP9108_RS05265 PF07963 Prokaryotic N-terminal methylation motif AP9108_RS05295 PF01556 DnaJ C terminal domain AP9108_RS05295 PF00226 DnaJ domain AP9108_RS05300 PF00012 Hsp70 protein AP9108_RS05305 PF01593 Flavin containing amine oxidoreductase AP9108_RS05320 PF00270 DEAD/DEAH box helicase AP9108_RS05320 PF00271 Helicase conserved C-terminal domain AP9108_RS05345 PF04542 Sigma-70 region 2 AP9108_RS05345 PF00140 Sigma-70 factor, region 1.2 AP9108_RS05345 PF04539 Sigma-70 region 3 AP9108_RS05345 PF04545 Sigma-70, region 4 AP9108_RS05375 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AP9108_RS05375 PF01926 50S ribosome-binding GTPase AP9108_RS05380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AP9108_RS05390 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS05390 PF08245 Mur ligase middle domain AP9108_RS05390 PF01225 Mur ligase family, catalytic domain AP9108_RS05430 PF00005 ABC transporter AP9108_RS05445 PF08865 Domain of unknown function (DUF1830) AP9108_RS05460 PF01098 Cell cycle protein AP9108_RS05470 PF03717 Penicillin-binding Protein dimerisation domain AP9108_RS05470 PF00905 Penicillin binding protein transpeptidase domain AP9108_RS05500 PF01235 Sodium:alanine symporter family AP9108_RS05505 PF00977 Histidine biosynthesis protein AP9108_RS05660 PF00202 Aminotransferase class-III AP9108_RS05670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AP9108_RS05680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AP9108_RS05680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AP9108_RS05690 PF00156 Phosphoribosyl transferase domain AP9108_RS05700 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS05830 PF01040 UbiA prenyltransferase family AP9108_RS05860 PF00535 Glycosyl transferase family 2 AP9108_RS05865 PF00069 Protein kinase domain AP9108_RS05865 PF03793 PASTA domain AP9108_RS05870 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS05870 PF00989 PAS fold AP9108_RS05875 PF07690 Major Facilitator Superfamily AP9108_RS05880 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AP9108_RS05880 PF17768 RecJ OB domain AP9108_RS05880 PF02272 DHHA1 domain AP9108_RS05880 PF01368 DHH family AP9108_RS05885 PF01432 Peptidase family M3 AP9108_RS05930 PF11838 ERAP1-like C-terminal domain AP9108_RS05930 PF01433 Peptidase family M1 domain AP9108_RS05935 PF00155 Aminotransferase class I and II AP9108_RS05940 PF00708 Acylphosphatase AP9108_RS05960 PF02885 Glycosyl transferase family, helical bundle domain AP9108_RS05960 PF00591 Glycosyl transferase family, a/b domain AP9108_RS05985 PF04483 Protein of unknown function (DUF565) AP9108_RS05995 PF03600 Citrate transporter AP9108_RS06010 PF02021 Uncharacterised protein family UPF0102 AP9108_RS06020 PF02547 Queuosine biosynthesis protein AP9108_RS06025 PF01783 Ribosomal L32p protein family AP9108_RS06035 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS06050 PF02743 Cache domain AP9108_RS06050 PF00672 HAMP domain AP9108_RS06050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS06055 PF12146 Serine aminopeptidase, S33 AP9108_RS06095 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS06120 PF11283 Protein of unknown function (DUF3084) AP9108_RS06125 PF00027 Cyclic nucleotide-binding domain AP9108_RS06125 PF13545 Crp-like helix-turn-helix domain AP9108_RS06135 PF00475 Imidazoleglycerol-phosphate dehydratase AP9108_RS06140 PF03572 Peptidase family S41 AP9108_RS06140 PF00595 PDZ domain AP9108_RS06150 PF03572 Peptidase family S41 AP9108_RS06150 PF00595 PDZ domain AP9108_RS06160 PF03853 YjeF-related protein N-terminus AP9108_RS06160 PF01256 Carbohydrate kinase AP9108_RS06185 PF01790 Prolipoprotein diacylglyceryl transferase AP9108_RS06255 PF07963 Prokaryotic N-terminal methylation motif AP9108_RS06255 PF14245 Type IV pilin PilA AP9108_RS06270 PF13847 Methyltransferase domain AP9108_RS06275 PF00534 Glycosyl transferases group 1 AP9108_RS06275 PF13439 Glycosyltransferase Family 4 AP9108_RS06310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS06315 PF01967 MoaC family AP9108_RS06325 PF00391 PEP-utilising enzyme, mobile domain AP9108_RS06325 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AP9108_RS06340 PF13193 AMP-binding enzyme C-terminal domain AP9108_RS06340 PF00501 AMP-binding enzyme AP9108_RS06345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AP9108_RS06355 PF03023 Lipid II flippase MurJ AP9108_RS06375 PF01593 Flavin containing amine oxidoreductase AP9108_RS06390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP9108_RS06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS06395 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS06400 PF00491 Arginase family AP9108_RS06410 PF00696 Amino acid kinase family AP9108_RS06415 PF01765 Ribosome recycling factor AP9108_RS06420 PF01494 FAD binding domain AP9108_RS06425 PF00563 EAL domain AP9108_RS06425 PF01590 GAF domain AP9108_RS06425 PF00360 Phytochrome region AP9108_RS06425 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS06430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP9108_RS06435 PF01523 Putative modulator of DNA gyrase AP9108_RS06440 PF03574 Peptidase family S48 AP9108_RS06440 PF18460 Heterocyst differentiation regulator C-terminal Hood domain AP9108_RS06450 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP9108_RS06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS06450 PF17806 Sarcosine oxidase A3 domain AP9108_RS06450 PF01571 Aminomethyltransferase folate-binding domain AP9108_RS06455 PF02563 Polysaccharide biosynthesis/export protein AP9108_RS06455 PF10531 SLBB domain AP9108_RS06455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AP9108_RS06460 PF13614 AAA domain AP9108_RS06470 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS06470 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS06470 PF00563 EAL domain AP9108_RS06480 PF00330 Aconitase family (aconitate hydratase) AP9108_RS06480 PF06434 Aconitate hydratase 2 N-terminus AP9108_RS06480 PF11791 Aconitate B N-terminal domain AP9108_RS06535 PF13614 AAA domain AP9108_RS06560 PF00196 Bacterial regulatory proteins, luxR family AP9108_RS06560 PF00072 Response regulator receiver domain AP9108_RS06575 PF02195 ParB-like nuclease domain AP9108_RS06700 PF03471 Transporter associated domain AP9108_RS06700 PF01595 Cyclin M transmembrane N-terminal domain AP9108_RS06700 PF00571 CBS domain AP9108_RS06705 PF00781 Diacylglycerol kinase catalytic domain AP9108_RS06705 PF02142 MGS-like domain AP9108_RS06710 PF00403 Heavy-metal-associated domain AP9108_RS06755 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS06755 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS06755 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS06755 PF17871 AAA lid domain AP9108_RS06755 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS06765 PF01926 50S ribosome-binding GTPase AP9108_RS06765 PF13167 GTP-binding GTPase N-terminal AP9108_RS06765 PF16360 GTP-binding GTPase Middle Region AP9108_RS06770 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS06770 PF00395 S-layer homology domain AP9108_RS06815 PF00920 Dehydratase family AP9108_RS06845 PF02469 Fasciclin domain AP9108_RS06850 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS06855 PF13476 AAA domain AP9108_RS06870 PF02310 B12 binding domain AP9108_RS06870 PF13282 Domain of unknown function (DUF4070) AP9108_RS06870 PF04055 Radical SAM superfamily AP9108_RS06875 PF00155 Aminotransferase class I and II AP9108_RS06880 PF08659 KR domain AP9108_RS06880 PF00550 Phosphopantetheine attachment site AP9108_RS06880 PF00698 Acyl transferase domain AP9108_RS06880 PF16197 Ketoacyl-synthetase C-terminal extension AP9108_RS06880 PF00109 Beta-ketoacyl synthase, N-terminal domain AP9108_RS06880 PF02801 Beta-ketoacyl synthase, C-terminal domain AP9108_RS06880 PF14765 Polyketide synthase dehydratase AP9108_RS06885 PF00501 AMP-binding enzyme AP9108_RS06895 PF00501 AMP-binding enzyme AP9108_RS06900 PF07690 Major Facilitator Superfamily AP9108_RS06915 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AP9108_RS06920 PF00633 Helix-hairpin-helix motif AP9108_RS06920 PF02132 RecR protein AP9108_RS06920 PF13662 Toprim domain AP9108_RS06945 PF05996 Ferredoxin-dependent bilin reductase AP9108_RS06955 PF01383 CpcD/allophycocyanin linker domain AP9108_RS06960 PF00502 Phycobilisome protein AP9108_RS06965 PF00502 Phycobilisome protein AP9108_RS07085 PF12697 Alpha/beta hydrolase family AP9108_RS07095 PF00482 Type II secretion system (T2SS), protein F AP9108_RS07100 PF00437 Type II/IV secretion system protein AP9108_RS07105 PF00437 Type II/IV secretion system protein AP9108_RS07105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AP9108_RS07110 PF01025 GrpE AP9108_RS07115 PF00012 Hsp70 protein AP9108_RS07120 PF00226 DnaJ domain AP9108_RS07120 PF01556 DnaJ C terminal domain AP9108_RS07120 PF00684 DnaJ central domain AP9108_RS07130 PF03193 RsgA GTPase AP9108_RS07145 PF07690 Major Facilitator Superfamily AP9108_RS07155 PF07969 Amidohydrolase family AP9108_RS07160 PF10531 SLBB domain AP9108_RS07160 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AP9108_RS07160 PF02563 Polysaccharide biosynthesis/export protein AP9108_RS07165 PF13614 AAA domain AP9108_RS07185 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS07200 PF13439 Glycosyltransferase Family 4 AP9108_RS07200 PF00534 Glycosyl transferases group 1 AP9108_RS07215 PF13932 GidA associated domain AP9108_RS07215 PF01134 Glucose inhibited division protein A AP9108_RS07240 PF00690 Cation transporter/ATPase, N-terminus AP9108_RS07240 PF00689 Cation transporting ATPase, C-terminus AP9108_RS07350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS07350 PF01348 Type II intron maturase AP9108_RS07370 PF00266 Aminotransferase class-V AP9108_RS07375 PF01458 Uncharacterized protein family (UPF0051) AP9108_RS07380 PF00005 ABC transporter AP9108_RS07385 PF01458 Uncharacterized protein family (UPF0051) AP9108_RS07400 PF05496 Holliday junction DNA helicase RuvB P-loop domain AP9108_RS07400 PF05491 RuvB C-terminal winged helix domain AP9108_RS07400 PF17864 RuvB AAA lid domain AP9108_RS07415 PF00480 ROK family AP9108_RS07480 PF00742 Homoserine dehydrogenase AP9108_RS07480 PF03447 Homoserine dehydrogenase, NAD binding domain AP9108_RS07480 PF01842 ACT domain AP9108_RS07485 PF13180 PDZ domain AP9108_RS07490 PF11378 Protein of unknown function (DUF3181) AP9108_RS07500 PF03631 Virulence factor BrkB AP9108_RS07520 PF01297 Zinc-uptake complex component A periplasmic AP9108_RS07525 PF00005 ABC transporter AP9108_RS07530 PF00950 ABC 3 transport family AP9108_RS07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS07535 PF00403 Heavy-metal-associated domain AP9108_RS07535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP9108_RS07545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS07565 PF00226 DnaJ domain AP9108_RS07565 PF01556 DnaJ C terminal domain AP9108_RS07565 PF00684 DnaJ central domain AP9108_RS07575 PF01255 Putative undecaprenyl diphosphate synthase AP9108_RS07580 PF02457 DisA bacterial checkpoint controller nucleotide-binding AP9108_RS07585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AP9108_RS07585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AP9108_RS07595 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS07595 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS07595 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS07595 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS07595 PF17871 AAA lid domain AP9108_RS07605 PF02597 ThiS family AP9108_RS07610 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS07615 PF00883 Cytosol aminopeptidase family, catalytic domain AP9108_RS07615 PF02789 Cytosol aminopeptidase family, N-terminal domain AP9108_RS07625 PF00989 PAS fold AP9108_RS07625 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS07625 PF13426 PAS domain AP9108_RS07625 PF13188 PAS domain AP9108_RS07635 PF00293 NUDIX domain AP9108_RS07650 PF07687 Peptidase dimerisation domain AP9108_RS07650 PF01546 Peptidase family M20/M25/M40 AP9108_RS07660 PF00561 alpha/beta hydrolase fold AP9108_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS07670 PF00156 Phosphoribosyl transferase domain AP9108_RS07690 PF00551 Formyl transferase AP9108_RS07690 PF02911 Formyl transferase, C-terminal domain AP9108_RS07695 PF02397 Bacterial sugar transferase AP9108_RS07705 PF02617 ATP-dependent Clp protease adaptor protein ClpS AP9108_RS07715 PF00994 Probable molybdopterin binding domain AP9108_RS07720 PF01966 HD domain AP9108_RS07725 PF01329 Pterin 4 alpha carbinolamine dehydratase AP9108_RS07730 PF00188 Cysteine-rich secretory protein family AP9108_RS07740 PF05175 Methyltransferase small domain AP9108_RS07755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AP9108_RS07760 PF00873 AcrB/AcrD/AcrF family AP9108_RS07790 PF01658 Myo-inositol-1-phosphate synthase AP9108_RS07795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AP9108_RS07955 PF02397 Bacterial sugar transferase AP9108_RS07960 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS07965 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS07970 PF01812 5-formyltetrahydrofolate cyclo-ligase family AP9108_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS07980 PF00583 Acetyltransferase (GNAT) family AP9108_RS08010 PF01218 Coproporphyrinogen III oxidase AP9108_RS08015 PF01740 STAS domain AP9108_RS08020 PF11264 Thylakoid formation protein AP9108_RS08045 PF00462 Glutaredoxin AP9108_RS08055 PF04012 PspA/IM30 family AP9108_RS08070 PF12452 Protein of unknown function (DUF3685) AP9108_RS08070 PF00072 Response regulator receiver domain AP9108_RS08080 PF00149 Calcineurin-like phosphoesterase AP9108_RS08100 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS08115 PF00498 FHA domain AP9108_RS08115 PF00005 ABC transporter AP9108_RS08115 PF01061 ABC-2 type transporter AP9108_RS08130 PF00535 Glycosyl transferase family 2 AP9108_RS08135 PF00535 Glycosyl transferase family 2 AP9108_RS08140 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS08145 PF03040 CemA family AP9108_RS08235 PF00672 HAMP domain AP9108_RS08235 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS08245 PF00392 Bacterial regulatory proteins, gntR family AP9108_RS08250 PF01738 Dienelactone hydrolase family AP9108_RS08255 PF00575 S1 RNA binding domain AP9108_RS08260 PF01869 BadF/BadG/BcrA/BcrD ATPase family AP9108_RS08275 PF00581 Rhodanese-like domain AP9108_RS08295 PF13291 ACT domain AP9108_RS08295 PF02824 TGS domain AP9108_RS08295 PF04607 Region found in RelA / SpoT proteins AP9108_RS08355 PF00069 Protein kinase domain AP9108_RS08410 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS08410 PF17871 AAA lid domain AP9108_RS08410 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS08410 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS08410 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS08435 PF00989 PAS fold AP9108_RS08435 PF13426 PAS domain AP9108_RS08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS08435 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS08435 PF13188 PAS domain AP9108_RS08455 PF01593 Flavin containing amine oxidoreductase AP9108_RS08480 PF00403 Heavy-metal-associated domain AP9108_RS08490 PF12169 DNA polymerase III subunits gamma and tau domain III AP9108_RS08505 PF01383 CpcD/allophycocyanin linker domain AP9108_RS08510 PF00427 Phycobilisome Linker polypeptide AP9108_RS08510 PF01383 CpcD/allophycocyanin linker domain AP9108_RS08515 PF00427 Phycobilisome Linker polypeptide AP9108_RS08515 PF01383 CpcD/allophycocyanin linker domain AP9108_RS08520 PF00502 Phycobilisome protein AP9108_RS08525 PF00502 Phycobilisome protein AP9108_RS08540 PF00483 Nucleotidyl transferase AP9108_RS08545 PF00436 Single-strand binding protein family AP9108_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS08550 PF16736 Single Cache-like AP9108_RS08550 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS08550 PF00989 PAS fold AP9108_RS08575 PF00072 Response regulator receiver domain AP9108_RS08575 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS08585 PF03099 Biotin/lipoate A/B protein ligase family AP9108_RS08590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS08590 PF01348 Type II intron maturase AP9108_RS08595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS08595 PF01348 Type II intron maturase AP9108_RS08630 PF01348 Type II intron maturase AP9108_RS08630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS08640 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AP9108_RS08640 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AP9108_RS08665 PF01348 Type II intron maturase AP9108_RS08665 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS08695 PF02543 Carbamoyltransferase N-terminus AP9108_RS08695 PF16861 Carbamoyltransferase C-terminus AP9108_RS08720 PF13183 4Fe-4S dicluster domain AP9108_RS08720 PF02913 FAD linked oxidases, C-terminal domain AP9108_RS08720 PF01565 FAD binding domain AP9108_RS08730 PF00574 Clp protease AP9108_RS08740 PF17876 Cold shock domain AP9108_RS08740 PF08206 Ribonuclease B OB domain AP9108_RS08740 PF00773 RNB domain AP9108_RS08740 PF00575 S1 RNA binding domain AP9108_RS08790 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS08790 PF00672 HAMP domain AP9108_RS08800 PF00216 Bacterial DNA-binding protein AP9108_RS08810 PF02514 CobN/Magnesium Chelatase AP9108_RS08810 PF11965 Domain of unknown function (DUF3479) AP9108_RS08815 PF02386 Cation transport protein AP9108_RS08820 PF02254 TrkA-N domain AP9108_RS08820 PF02080 TrkA-C domain AP9108_RS08855 PF03725 3' exoribonuclease family, domain 2 AP9108_RS08855 PF01138 3' exoribonuclease family, domain 1 AP9108_RS08860 PF00395 S-layer homology domain AP9108_RS08860 PF00963 Cohesin domain AP9108_RS08880 PF00535 Glycosyl transferase family 2 AP9108_RS08920 PF13439 Glycosyltransferase Family 4 AP9108_RS08920 PF00534 Glycosyl transferases group 1 AP9108_RS08935 PF10397 Adenylosuccinate lyase C-terminus AP9108_RS08935 PF00206 Lyase AP9108_RS08985 PF01348 Type II intron maturase AP9108_RS08985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS09105 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS09110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AP9108_RS09115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AP9108_RS09115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AP9108_RS09125 PF00365 Phosphofructokinase AP9108_RS09135 PF00923 Transaldolase/Fructose-6-phosphate aldolase AP9108_RS09135 PF13202 EF hand AP9108_RS09175 PF01348 Type II intron maturase AP9108_RS09175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS09190 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS09205 PF02562 PhoH-like protein AP9108_RS09215 PF00886 Ribosomal protein S16 AP9108_RS09270 PF00005 ABC transporter AP9108_RS09285 PF00124 Photosynthetic reaction centre protein AP9108_RS09350 PF00571 CBS domain AP9108_RS09350 PF00478 IMP dehydrogenase / GMP reductase domain AP9108_RS09360 PF01737 YCF9 AP9108_RS09365 PF00885 6,7-dimethyl-8-ribityllumazine synthase AP9108_RS09385 PF07662 Na+ dependent nucleoside transporter C-terminus AP9108_RS09385 PF07670 Nucleoside recognition AP9108_RS09385 PF01773 Na+ dependent nucleoside transporter N-terminus AP9108_RS09400 PF01406 tRNA synthetases class I (C) catalytic domain AP9108_RS09400 PF09190 DALR domain AP9108_RS09405 PF01502 Phosphoribosyl-AMP cyclohydrolase AP9108_RS09410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS09410 PF07683 Cobalamin synthesis protein cobW C-terminal domain AP9108_RS09415 PF02657 Fe-S metabolism associated domain AP9108_RS09420 PF00490 Delta-aminolevulinic acid dehydratase AP9108_RS09440 PF00909 Ammonium Transporter Family AP9108_RS09450 PF00731 AIR carboxylase AP9108_RS09465 PF01979 Amidohydrolase family AP9108_RS09500 PF00561 alpha/beta hydrolase fold AP9108_RS09505 PF00154 recA bacterial DNA recombination protein AP9108_RS09510 PF00180 Isocitrate/isopropylmalate dehydrogenase AP9108_RS09515 PF01293 Phosphoenolpyruvate carboxykinase AP9108_RS09525 PF03453 MoeA N-terminal region (domain I and II) AP9108_RS09525 PF03454 MoeA C-terminal region (domain IV) AP9108_RS09525 PF00994 Probable molybdopterin binding domain AP9108_RS09530 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AP9108_RS09530 PF12557 Cob(I)alamin adenosyltransferase N terminal AP9108_RS09535 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS09555 PF01627 Hpt domain AP9108_RS09555 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS09555 PF00072 Response regulator receiver domain AP9108_RS09565 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS09575 PF02469 Fasciclin domain AP9108_RS09590 PF02885 Glycosyl transferase family, helical bundle domain AP9108_RS09590 PF00117 Glutamine amidotransferase class-I AP9108_RS09590 PF00591 Glycosyl transferase family, a/b domain AP9108_RS09595 PF01219 Prokaryotic diacylglycerol kinase AP9108_RS09600 PF02130 Uncharacterized protein family UPF0054 AP9108_RS09635 PF07282 Putative transposase DNA-binding domain AP9108_RS09635 PF01385 Probable transposase AP9108_RS09635 PF12323 Helix-turn-helix domain AP9108_RS09795 PF13735 tRNA nucleotidyltransferase domain 2 putative AP9108_RS09795 PF01743 Poly A polymerase head domain AP9108_RS09795 PF12627 Probable RNA and SrmB- binding site of polymerase A AP9108_RS09815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS09815 PF01348 Type II intron maturase AP9108_RS09850 PF00805 Pentapeptide repeats (8 copies) AP9108_RS09850 PF00069 Protein kinase domain AP9108_RS09925 PF00814 Glycoprotease family AP9108_RS09935 PF01891 Cobalt uptake substrate-specific transmembrane region AP9108_RS09960 PF01471 Putative peptidoglycan binding domain AP9108_RS09985 PF08443 RimK-like ATP-grasp domain AP9108_RS09985 PF08245 Mur ligase middle domain AP9108_RS09985 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS09990 PF03575 Peptidase family S51 AP9108_RS10000 PF01746 tRNA (Guanine-1)-methyltransferase AP9108_RS10015 PF00128 Alpha amylase, catalytic domain AP9108_RS10020 PF00999 Sodium/hydrogen exchanger family AP9108_RS10020 PF00582 Universal stress protein family AP9108_RS10095 PF03441 FAD binding domain of DNA photolyase AP9108_RS10095 PF00875 DNA photolyase AP9108_RS10100 PF02629 CoA binding domain AP9108_RS10100 PF00549 CoA-ligase AP9108_RS10105 PF00549 CoA-ligase AP9108_RS10105 PF08442 ATP-grasp domain AP9108_RS10120 PF07085 DRTGG domain AP9108_RS10260 PF04542 Sigma-70 region 2 AP9108_RS10260 PF04539 Sigma-70 region 3 AP9108_RS10260 PF04545 Sigma-70, region 4 AP9108_RS10265 PF01597 Glycine cleavage H-protein AP9108_RS10295 PF03781 Sulfatase-modifying factor enzyme 1 AP9108_RS10295 PF12867 DinB superfamily AP9108_RS10300 PF00561 alpha/beta hydrolase fold AP9108_RS10315 PF00223 Photosystem I psaA/psaB protein AP9108_RS10320 PF00223 Photosystem I psaA/psaB protein AP9108_RS10325 PF00677 Lumazine binding domain AP9108_RS10335 PF00248 Aldo/keto reductase family AP9108_RS10350 PF00069 Protein kinase domain AP9108_RS10355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP9108_RS10355 PF03466 LysR substrate binding domain AP9108_RS10360 PF03466 LysR substrate binding domain AP9108_RS10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP9108_RS10370 PF00085 Thioredoxin AP9108_RS10380 PF00923 Transaldolase/Fructose-6-phosphate aldolase AP9108_RS10385 PF00456 Transketolase, thiamine diphosphate binding domain AP9108_RS10385 PF02780 Transketolase, C-terminal domain AP9108_RS10385 PF02779 Transketolase, pyrimidine binding domain AP9108_RS10390 PF00075 RNase H AP9108_RS10395 PF01808 AICARFT/IMPCHase bienzyme AP9108_RS10395 PF02142 MGS-like domain AP9108_RS10400 PF02927 Cellulase N-terminal ig-like domain AP9108_RS10400 PF00759 Glycosyl hydrolase family 9 AP9108_RS10405 PF00072 Response regulator receiver domain AP9108_RS10405 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS10415 PF03600 Citrate transporter AP9108_RS10415 PF02080 TrkA-C domain AP9108_RS10420 PF14492 Elongation Factor G, domain II AP9108_RS10420 PF03764 Elongation factor G, domain IV AP9108_RS10420 PF00009 Elongation factor Tu GTP binding domain AP9108_RS10420 PF00679 Elongation factor G C-terminus AP9108_RS10425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP9108_RS10425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP9108_RS10425 PF00205 Thiamine pyrophosphate enzyme, central domain AP9108_RS10435 PF00535 Glycosyl transferase family 2 AP9108_RS10475 PF08007 Cupin superfamily protein AP9108_RS10490 PF00072 Response regulator receiver domain AP9108_RS10490 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS10495 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS10495 PF13426 PAS domain AP9108_RS10495 PF00672 HAMP domain AP9108_RS10510 PF00297 Ribosomal protein L3 AP9108_RS10515 PF00573 Ribosomal protein L4/L1 family AP9108_RS10520 PF00276 Ribosomal protein L23 AP9108_RS10525 PF00181 Ribosomal Proteins L2, RNA binding domain AP9108_RS10525 PF03947 Ribosomal Proteins L2, C-terminal domain AP9108_RS10530 PF00203 Ribosomal protein S19 AP9108_RS10540 PF00237 Ribosomal protein L22p/L17e AP9108_RS10545 PF07650 KH domain AP9108_RS10545 PF00189 Ribosomal protein S3, C-terminal domain AP9108_RS10550 PF00252 Ribosomal protein L16p/L10e AP9108_RS10555 PF00831 Ribosomal L29 protein AP9108_RS10560 PF00366 Ribosomal protein S17 AP9108_RS10565 PF00238 Ribosomal protein L14p/L23e AP9108_RS10570 PF00467 KOW motif AP9108_RS10570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AP9108_RS10575 PF00281 Ribosomal protein L5 AP9108_RS10575 PF00673 ribosomal L5P family C-terminus AP9108_RS10580 PF00410 Ribosomal protein S8 AP9108_RS10590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AP9108_RS10595 PF03719 Ribosomal protein S5, C-terminal domain AP9108_RS10595 PF00333 Ribosomal protein S5, N-terminal domain AP9108_RS10600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AP9108_RS10605 PF00344 SecY translocase AP9108_RS10615 PF01176 Translation initiation factor 1A / IF-1 AP9108_RS10620 PF00444 Ribosomal protein L36 AP9108_RS10625 PF00416 Ribosomal protein S13/S18 AP9108_RS10630 PF00411 Ribosomal protein S11 AP9108_RS10635 PF01000 RNA polymerase Rpb3/RpoA insert domain AP9108_RS10635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AP9108_RS10635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AP9108_RS10640 PF01196 Ribosomal protein L17 AP9108_RS10645 PF01416 tRNA pseudouridine synthase AP9108_RS10650 PF00572 Ribosomal protein L13 AP9108_RS10655 PF00380 Ribosomal protein S9/S16 AP9108_RS10660 PF01197 Ribosomal protein L31 AP9108_RS10670 PF07282 Putative transposase DNA-binding domain AP9108_RS10670 PF01385 Probable transposase AP9108_RS10670 PF12323 Helix-turn-helix domain AP9108_RS10680 PF00158 Sigma-54 interaction domain AP9108_RS10680 PF02954 Bacterial regulatory protein, Fis family AP9108_RS10680 PF00072 Response regulator receiver domain AP9108_RS10685 PF12848 ABC transporter AP9108_RS10685 PF16326 ABC transporter C-terminal domain AP9108_RS10685 PF00005 ABC transporter AP9108_RS10695 PF00072 Response regulator receiver domain AP9108_RS10715 PF00226 DnaJ domain AP9108_RS10715 PF01556 DnaJ C terminal domain AP9108_RS10725 PF00483 Nucleotidyl transferase AP9108_RS10740 PF08241 Methyltransferase domain AP9108_RS10750 PF01872 RibD C-terminal domain AP9108_RS10750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AP9108_RS10755 PF03055 Retinal pigment epithelial membrane protein AP9108_RS10760 PF03092 BT1 family AP9108_RS10790 PF00082 Subtilase family AP9108_RS10800 PF00931 NB-ARC domain AP9108_RS10800 PF00400 WD domain, G-beta repeat AP9108_RS10850 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS10865 PF00672 HAMP domain AP9108_RS10865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS10865 PF18698 Histidine kinase sensor domain AP9108_RS10865 PF00989 PAS fold AP9108_RS10865 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS10870 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS10875 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS10875 PF00072 Response regulator receiver domain AP9108_RS10890 PF03109 ABC1 family AP9108_RS10900 PF06470 SMC proteins Flexible Hinge Domain AP9108_RS10900 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS10935 PF03912 Psb28 protein AP9108_RS10940 PF00218 Indole-3-glycerol phosphate synthase AP9108_RS10955 PF00398 Ribosomal RNA adenine dimethylase AP9108_RS10960 PF00288 GHMP kinases N terminal domain AP9108_RS10960 PF08544 GHMP kinases C terminal AP9108_RS10970 PF00113 Enolase, C-terminal TIM barrel domain AP9108_RS10970 PF03952 Enolase, N-terminal domain AP9108_RS10975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP9108_RS10975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP9108_RS10995 PF05239 PRC-barrel domain AP9108_RS10995 PF01782 RimM N-terminal domain AP9108_RS11020 PF00582 Universal stress protein family AP9108_RS11030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AP9108_RS11035 PF04960 Glutaminase AP9108_RS11060 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AP9108_RS11065 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AP9108_RS11125 PF02469 Fasciclin domain AP9108_RS11130 PF02405 Permease MlaE AP9108_RS11160 PF00111 2Fe-2S iron-sulfur cluster binding domain AP9108_RS11170 PF00069 Protein kinase domain AP9108_RS11170 PF03793 PASTA domain AP9108_RS11210 PF04461 Protein of unknown function (DUF520) AP9108_RS11225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11225 PF01348 Type II intron maturase AP9108_RS11265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11265 PF01348 Type II intron maturase AP9108_RS11285 PF01348 Type II intron maturase AP9108_RS11285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11290 PF01348 Type II intron maturase AP9108_RS11290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11480 PF00753 Metallo-beta-lactamase superfamily AP9108_RS11495 PF01385 Probable transposase AP9108_RS11495 PF07282 Putative transposase DNA-binding domain AP9108_RS11495 PF12323 Helix-turn-helix domain AP9108_RS11505 PF17284 Spermidine synthase tetramerisation domain AP9108_RS11510 PF01063 Amino-transferase class IV AP9108_RS11520 PF01678 Diaminopimelate epimerase AP9108_RS11535 PF04960 Glutaminase AP9108_RS11575 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11575 PF01348 Type II intron maturase AP9108_RS11590 PF02152 Dihydroneopterin aldolase AP9108_RS11640 PF10742 Protein of unknown function (DUF2555) AP9108_RS11645 PF04127 DNA / pantothenate metabolism flavoprotein AP9108_RS11645 PF02441 Flavoprotein AP9108_RS11655 PF01494 FAD binding domain AP9108_RS11675 PF06426 Serine acetyltransferase, N-terminal AP9108_RS11675 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS11805 PF01348 Type II intron maturase AP9108_RS11805 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11875 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS11875 PF00072 Response regulator receiver domain AP9108_RS11885 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AP9108_RS11885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS11890 PF01584 CheW-like domain AP9108_RS11890 PF02895 Signal transducing histidine kinase, homodimeric domain AP9108_RS11890 PF01627 Hpt domain AP9108_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS11890 PF00072 Response regulator receiver domain AP9108_RS11910 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS11910 PF17862 AAA+ lid domain AP9108_RS11910 PF06480 FtsH Extracellular AP9108_RS11910 PF01434 Peptidase family M41 AP9108_RS11930 PF01348 Type II intron maturase AP9108_RS11930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS11950 PF00563 EAL domain AP9108_RS11950 PF01590 GAF domain AP9108_RS11950 PF00360 Phytochrome region AP9108_RS11950 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS11960 PF00877 NlpC/P60 family AP9108_RS11960 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AP9108_RS11985 PF01797 Transposase IS200 like AP9108_RS12000 PF02545 Maf-like protein AP9108_RS12030 PF01425 Amidase AP9108_RS12040 PF00005 ABC transporter AP9108_RS12045 PF01933 Uncharacterised protein family UPF0052 AP9108_RS12055 PF01471 Putative peptidoglycan binding domain AP9108_RS12075 PF02472 Biopolymer transport protein ExbD/TolR AP9108_RS12095 PF00578 AhpC/TSA family AP9108_RS12130 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AP9108_RS12145 PF00149 Calcineurin-like phosphoesterase AP9108_RS12145 PF02872 5'-nucleotidase, C-terminal domain AP9108_RS12150 PF03480 Bacterial extracellular solute-binding protein, family 7 AP9108_RS12155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AP9108_RS12155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP9108_RS12170 PF00111 2Fe-2S iron-sulfur cluster binding domain AP9108_RS12180 PF00459 Inositol monophosphatase family AP9108_RS12190 PF13393 Histidyl-tRNA synthetase AP9108_RS12195 PF00155 Aminotransferase class I and II AP9108_RS12200 PF11987 Translation-initiation factor 2 AP9108_RS12200 PF04760 Translation initiation factor IF-2, N-terminal region AP9108_RS12200 PF00009 Elongation factor Tu GTP binding domain AP9108_RS12210 PF00575 S1 RNA binding domain AP9108_RS12210 PF08529 NusA N-terminal domain AP9108_RS12210 PF13184 NusA-like KH domain AP9108_RS12215 PF02576 RimP N-terminal domain AP9108_RS12225 PF00535 Glycosyl transferase family 2 AP9108_RS12230 PF01250 Ribosomal protein S6 AP9108_RS12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS12240 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS12240 PF08448 PAS fold AP9108_RS12240 PF00072 Response regulator receiver domain AP9108_RS12240 PF13188 PAS domain AP9108_RS12245 PF04509 CheC-like family AP9108_RS12250 PF00072 Response regulator receiver domain AP9108_RS12260 PF04324 BFD-like [2Fe-2S] binding domain AP9108_RS12260 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS12265 PF01266 FAD dependent oxidoreductase AP9108_RS12275 PF00950 ABC 3 transport family AP9108_RS12280 PF00005 ABC transporter AP9108_RS12285 PF01297 Zinc-uptake complex component A periplasmic AP9108_RS12290 PF00773 RNB domain AP9108_RS12295 PF01084 Ribosomal protein S18 AP9108_RS12300 PF00471 Ribosomal protein L33 AP9108_RS12335 PF00155 Aminotransferase class I and II AP9108_RS12340 PF00085 Thioredoxin AP9108_RS12350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AP9108_RS12355 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AP9108_RS12355 PF01488 Shikimate / quinate 5-dehydrogenase AP9108_RS12355 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AP9108_RS12360 PF10458 Valyl tRNA synthetase tRNA binding arm AP9108_RS12360 PF08264 Anticodon-binding domain of tRNA AP9108_RS12360 PF00133 tRNA synthetases class I (I, L, M and V) AP9108_RS12380 PF00400 WD domain, G-beta repeat AP9108_RS12385 PF01300 Telomere recombination AP9108_RS12390 PF01969 Protein of unknown function DUF111 AP9108_RS12395 PF17755 UvrA DNA-binding domain AP9108_RS12395 PF17760 UvrA interaction domain AP9108_RS12400 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AP9108_RS12400 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AP9108_RS12405 PF00596 Class II Aldolase and Adducin N-terminal domain AP9108_RS12420 PF13411 MerR HTH family regulatory protein AP9108_RS12425 PF02570 Precorrin-8X methylmutase AP9108_RS12435 PF05173 Dihydrodipicolinate reductase, C-terminus AP9108_RS12435 PF01113 Dihydrodipicolinate reductase, N-terminus AP9108_RS12455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AP9108_RS12455 PF00005 ABC transporter AP9108_RS12460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AP9108_RS12460 PF00005 ABC transporter AP9108_RS12475 PF07859 alpha/beta hydrolase fold AP9108_RS12495 PF02698 DUF218 domain AP9108_RS12505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AP9108_RS12505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AP9108_RS12515 PF03808 Glycosyl transferase WecB/TagA/CpsF family AP9108_RS12520 PF00535 Glycosyl transferase family 2 AP9108_RS12530 PF00005 ABC transporter AP9108_RS12530 PF00664 ABC transporter transmembrane region AP9108_RS12540 PF13439 Glycosyltransferase Family 4 AP9108_RS12540 PF00534 Glycosyl transferases group 1 AP9108_RS12545 PF00534 Glycosyl transferases group 1 AP9108_RS12555 PF13439 Glycosyltransferase Family 4 AP9108_RS12555 PF00534 Glycosyl transferases group 1 AP9108_RS12565 PF00535 Glycosyl transferase family 2 AP9108_RS12575 PF13439 Glycosyltransferase Family 4 AP9108_RS12580 PF13439 Glycosyltransferase Family 4 AP9108_RS12585 PF00535 Glycosyl transferase family 2 AP9108_RS12590 PF00534 Glycosyl transferases group 1 AP9108_RS12595 PF00534 Glycosyl transferases group 1 AP9108_RS12595 PF13439 Glycosyltransferase Family 4 AP9108_RS12610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AP9108_RS12620 PF00805 Pentapeptide repeats (8 copies) AP9108_RS12620 PF00069 Protein kinase domain AP9108_RS12625 PF00072 Response regulator receiver domain AP9108_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS12630 PF09308 LuxQ, periplasmic AP9108_RS12630 PF00072 Response regulator receiver domain AP9108_RS12630 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS12640 PF03459 TOBE domain AP9108_RS12640 PF17912 MalK OB fold domain AP9108_RS12640 PF00005 ABC transporter AP9108_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS12650 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS12655 PF01547 Bacterial extracellular solute-binding protein AP9108_RS12660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP9108_RS12660 PF02403 Seryl-tRNA synthetase N-terminal domain AP9108_RS12665 PF00893 Small Multidrug Resistance protein AP9108_RS12685 PF00069 Protein kinase domain AP9108_RS12685 PF00805 Pentapeptide repeats (8 copies) AP9108_RS12690 PF00069 Protein kinase domain AP9108_RS12690 PF00805 Pentapeptide repeats (8 copies) AP9108_RS12695 PF00072 Response regulator receiver domain AP9108_RS12695 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS12710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS12715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AP9108_RS12725 PF00005 ABC transporter AP9108_RS12730 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS12735 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS12735 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS12735 PF00563 EAL domain AP9108_RS12745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AP9108_RS12750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AP9108_RS12755 PF13237 4Fe-4S dicluster domain AP9108_RS12760 PF00146 NADH dehydrogenase AP9108_RS12765 PF00285 Citrate synthase, C-terminal domain AP9108_RS12770 PF00300 Histidine phosphatase superfamily (branch 1) AP9108_RS12780 PF00842 Alanine racemase, C-terminal domain AP9108_RS12780 PF01168 Alanine racemase, N-terminal domain AP9108_RS12790 PF00675 Insulinase (Peptidase family M16) AP9108_RS12790 PF05193 Peptidase M16 inactive domain AP9108_RS12835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS12835 PF00072 Response regulator receiver domain AP9108_RS12835 PF01627 Hpt domain AP9108_RS12835 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS12835 PF00672 HAMP domain AP9108_RS12845 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AP9108_RS12860 PF01807 CHC2 zinc finger AP9108_RS12860 PF10410 DnaB-helicase binding domain of primase AP9108_RS12860 PF08275 DNA primase catalytic core, N-terminal domain AP9108_RS12880 PF02637 GatB domain AP9108_RS12880 PF02934 GatB/GatE catalytic domain AP9108_RS12890 PF01348 Type II intron maturase AP9108_RS12890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS12900 PF03552 Cellulose synthase AP9108_RS12900 PF00535 Glycosyl transferase family 2 AP9108_RS12900 PF07238 PilZ domain AP9108_RS13035 PF11700 Vacuole effluxer Atg22 like AP9108_RS13040 PF08865 Domain of unknown function (DUF1830) AP9108_RS13050 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS13050 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS13050 PF00563 EAL domain AP9108_RS13065 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS13065 PF00072 Response regulator receiver domain AP9108_RS13085 PF00582 Universal stress protein family AP9108_RS13095 PF01649 Ribosomal protein S20 AP9108_RS13100 PF01026 TatD related DNase AP9108_RS13115 PF04983 RNA polymerase Rpb1, domain 3 AP9108_RS13115 PF05000 RNA polymerase Rpb1, domain 4 AP9108_RS13115 PF04998 RNA polymerase Rpb1, domain 5 AP9108_RS13230 PF03209 PUCC protein AP9108_RS13245 PF16123 Hydroxyacylglutathione hydrolase C-terminus AP9108_RS13245 PF00753 Metallo-beta-lactamase superfamily AP9108_RS13260 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS13260 PF00072 Response regulator receiver domain AP9108_RS13295 PF13181 Tetratricopeptide repeat AP9108_RS13295 PF00535 Glycosyl transferase family 2 AP9108_RS13305 PF01118 Semialdehyde dehydrogenase, NAD binding domain AP9108_RS13305 PF02774 Semialdehyde dehydrogenase, dimerisation domain AP9108_RS13310 PF00582 Universal stress protein family AP9108_RS13315 PF03061 Thioesterase superfamily AP9108_RS13325 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS13325 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS13325 PF00563 EAL domain AP9108_RS13335 PF00563 EAL domain AP9108_RS13335 PF01590 GAF domain AP9108_RS13335 PF00360 Phytochrome region AP9108_RS13335 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS13345 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) AP9108_RS13355 PF04715 Anthranilate synthase component I, N terminal region AP9108_RS13355 PF00425 chorismate binding enzyme AP9108_RS13360 PF00294 pfkB family carbohydrate kinase AP9108_RS13360 PF01467 Cytidylyltransferase-like AP9108_RS13365 PF00072 Response regulator receiver domain AP9108_RS13370 PF04055 Radical SAM superfamily AP9108_RS13380 PF04434 SWIM zinc finger AP9108_RS13415 PF00005 ABC transporter AP9108_RS13420 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS13425 PF00005 ABC transporter AP9108_RS13435 PF02560 Cyanate lyase C-terminal domain AP9108_RS13465 PF00534 Glycosyl transferases group 1 AP9108_RS13465 PF13579 Glycosyl transferase 4-like domain AP9108_RS13475 PF08338 Domain of unknown function (DUF1731) AP9108_RS13475 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS13480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AP9108_RS13480 PF01926 50S ribosome-binding GTPase AP9108_RS13495 PF00107 Zinc-binding dehydrogenase AP9108_RS13495 PF08240 Alcohol dehydrogenase GroES-like domain AP9108_RS13500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS13500 PF00672 HAMP domain AP9108_RS13500 PF00072 Response regulator receiver domain AP9108_RS13500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS13500 PF01627 Hpt domain AP9108_RS13500 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS13530 PF01348 Type II intron maturase AP9108_RS13530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS13550 PF01348 Type II intron maturase AP9108_RS13550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS13570 PF01625 Peptide methionine sulfoxide reductase AP9108_RS13580 PF08264 Anticodon-binding domain of tRNA AP9108_RS13580 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase AP9108_RS13580 PF00133 tRNA synthetases class I (I, L, M and V) AP9108_RS13580 PF10458 Valyl tRNA synthetase tRNA binding arm AP9108_RS13585 PF00749 tRNA synthetases class I (E and Q), catalytic domain AP9108_RS13630 PF01348 Type II intron maturase AP9108_RS13630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS13670 PF09827 CRISPR associated protein Cas2 AP9108_RS13770 PF01348 Type II intron maturase AP9108_RS13770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS13795 PF10716 NADH dehydrogenase transmembrane subunit AP9108_RS13810 PF00248 Aldo/keto reductase family AP9108_RS13850 PF00571 CBS domain AP9108_RS13850 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS13855 PF10417 C-terminal domain of 1-Cys peroxiredoxin AP9108_RS13855 PF00578 AhpC/TSA family AP9108_RS13860 PF02401 LytB protein AP9108_RS13865 PF00183 Hsp90 protein AP9108_RS13870 PF00535 Glycosyl transferase family 2 AP9108_RS13875 PF00535 Glycosyl transferase family 2 AP9108_RS13875 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AP9108_RS13880 PF00535 Glycosyl transferase family 2 AP9108_RS13885 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS13885 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS13885 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS13885 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS13885 PF17871 AAA lid domain AP9108_RS13890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP9108_RS13905 PF03069 Acetamidase/Formamidase family AP9108_RS13925 PF07687 Peptidase dimerisation domain AP9108_RS13925 PF01546 Peptidase family M20/M25/M40 AP9108_RS14200 PF00155 Aminotransferase class I and II AP9108_RS14205 PF02016 LD-carboxypeptidase N-terminal domain AP9108_RS14205 PF17676 LD-carboxypeptidase C-terminal domain AP9108_RS14210 PF02567 Phenazine biosynthesis-like protein AP9108_RS14215 PF04715 Anthranilate synthase component I, N terminal region AP9108_RS14215 PF00425 chorismate binding enzyme AP9108_RS14220 PF02531 PsaD AP9108_RS14395 PF01774 UreD urease accessory protein AP9108_RS14400 PF00547 Urease, gamma subunit AP9108_RS14405 PF00699 Urease beta subunit AP9108_RS14415 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS14435 PF02638 Glycosyl hydrolase-like 10 AP9108_RS14445 PF00375 Sodium:dicarboxylate symporter family AP9108_RS14450 PF01177 Asp/Glu/Hydantoin racemase AP9108_RS14500 PF00478 IMP dehydrogenase / GMP reductase domain AP9108_RS14505 PF00085 Thioredoxin AP9108_RS14515 PF00072 Response regulator receiver domain AP9108_RS14515 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS14520 PF01634 ATP phosphoribosyltransferase AP9108_RS14540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS14545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS14550 PF02570 Precorrin-8X methylmutase AP9108_RS14555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AP9108_RS14555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AP9108_RS14560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS14565 PF02571 Precorrin-6x reductase CbiJ/CobK AP9108_RS14570 PF00202 Aminotransferase class-III AP9108_RS14575 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AP9108_RS14575 PF01502 Phosphoribosyl-AMP cyclohydrolase AP9108_RS14585 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS14585 PF00072 Response regulator receiver domain AP9108_RS14600 PF14403 Circularly permuted ATP-grasp type 2 AP9108_RS14610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AP9108_RS14610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AP9108_RS14630 PF00005 ABC transporter AP9108_RS14630 PF00664 ABC transporter transmembrane region AP9108_RS14640 PF00012 Hsp70 protein AP9108_RS14645 PF00149 Calcineurin-like phosphoesterase AP9108_RS14650 PF00149 Calcineurin-like phosphoesterase AP9108_RS14660 PF01081 KDPG and KHG aldolase AP9108_RS14665 PF13409 Glutathione S-transferase, N-terminal domain AP9108_RS14680 PF00762 Ferrochelatase AP9108_RS14685 PF02542 YgbB family AP9108_RS14690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AP9108_RS14695 PF00731 AIR carboxylase AP9108_RS14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS14710 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS14710 PF08448 PAS fold AP9108_RS14710 PF13426 PAS domain AP9108_RS14710 PF00072 Response regulator receiver domain AP9108_RS14725 PF01348 Type II intron maturase AP9108_RS14725 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS14855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS14855 PF01348 Type II intron maturase AP9108_RS14905 PF00696 Amino acid kinase family AP9108_RS14905 PF13840 ACT domain AP9108_RS14905 PF01842 ACT domain AP9108_RS14910 PF03773 Predicted permease AP9108_RS14930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS14935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AP9108_RS14935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AP9108_RS14945 PF00403 Heavy-metal-associated domain AP9108_RS14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS14945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP9108_RS14950 PF13419 Haloacid dehalogenase-like hydrolase AP9108_RS14955 PF00072 Response regulator receiver domain AP9108_RS14955 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS14960 PF00072 Response regulator receiver domain AP9108_RS14960 PF01339 CheB methylesterase AP9108_RS14965 PF02895 Signal transducing histidine kinase, homodimeric domain AP9108_RS14965 PF00072 Response regulator receiver domain AP9108_RS14965 PF01627 Hpt domain AP9108_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS14965 PF01584 CheW-like domain AP9108_RS14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS14970 PF05227 CHASE3 domain AP9108_RS14970 PF00672 HAMP domain AP9108_RS14975 PF12729 Four helix bundle sensory module for signal transduction AP9108_RS14975 PF00672 HAMP domain AP9108_RS14975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS14985 PF01739 CheR methyltransferase, SAM binding domain AP9108_RS15000 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N AP9108_RS15005 PF03699 Uncharacterised protein family (UPF0182) AP9108_RS15020 PF00005 ABC transporter AP9108_RS15075 PF03437 BtpA family AP9108_RS15080 PF07884 Vitamin K epoxide reductase family AP9108_RS15085 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS15085 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS15085 PF00563 EAL domain AP9108_RS15090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AP9108_RS15105 PF00253 Ribosomal protein S14p/S29e AP9108_RS15110 PF00633 Helix-hairpin-helix motif AP9108_RS15110 PF00730 HhH-GPD superfamily base excision DNA repair protein AP9108_RS15115 PF13180 PDZ domain AP9108_RS15115 PF02163 Peptidase family M50 AP9108_RS15125 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS15130 PF08990 Erythronolide synthase docking AP9108_RS15130 PF00975 Thioesterase domain AP9108_RS15130 PF00550 Phosphopantetheine attachment site AP9108_RS15130 PF00698 Acyl transferase domain AP9108_RS15130 PF02801 Beta-ketoacyl synthase, C-terminal domain AP9108_RS15130 PF00109 Beta-ketoacyl synthase, N-terminal domain AP9108_RS15130 PF16197 Ketoacyl-synthetase C-terminal extension AP9108_RS15135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AP9108_RS15140 PF02392 Ycf4 AP9108_RS15145 PF00124 Photosynthetic reaction centre protein AP9108_RS15150 PF00421 Photosystem II protein AP9108_RS15155 PF02503 Polyphosphate kinase middle domain AP9108_RS15155 PF13090 Polyphosphate kinase C-terminal domain 2 AP9108_RS15155 PF17941 Polyphosphate kinase C-terminal domain 1 AP9108_RS15155 PF13089 Polyphosphate kinase N-terminal domain AP9108_RS15165 PF00012 Hsp70 protein AP9108_RS15170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AP9108_RS15170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AP9108_RS15180 PF00176 SNF2 family N-terminal domain AP9108_RS15180 PF00271 Helicase conserved C-terminal domain AP9108_RS15195 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AP9108_RS15230 PF03776 Septum formation topological specificity factor MinE AP9108_RS15235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AP9108_RS15240 PF03775 Septum formation inhibitor MinC, C-terminal domain AP9108_RS15245 PF00890 FAD binding domain AP9108_RS15245 PF02910 Fumarate reductase flavoprotein C-term AP9108_RS15260 PF00962 Adenosine/AMP deaminase AP9108_RS15270 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS15270 PF00072 Response regulator receiver domain AP9108_RS15275 PF01348 Type II intron maturase AP9108_RS15275 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS15320 PF00741 Gas vesicle protein AP9108_RS15330 PF00741 Gas vesicle protein AP9108_RS15340 PF00741 Gas vesicle protein AP9108_RS15350 PF07728 AAA domain (dynein-related subfamily) AP9108_RS15355 PF00741 Gas vesicle protein AP9108_RS15360 PF01022 Bacterial regulatory protein, arsR family AP9108_RS15370 PF12697 Alpha/beta hydrolase family AP9108_RS15380 PF00535 Glycosyl transferase family 2 AP9108_RS15400 PF03412 Peptidase C39 family AP9108_RS15400 PF00005 ABC transporter AP9108_RS15400 PF00664 ABC transporter transmembrane region AP9108_RS15415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AP9108_RS15420 PF04321 RmlD substrate binding domain AP9108_RS15425 PF00483 Nucleotidyl transferase AP9108_RS15455 PF12161 HsdM N-terminal domain AP9108_RS15455 PF02384 N-6 DNA Methylase AP9108_RS15460 PF01420 Type I restriction modification DNA specificity domain AP9108_RS15465 PF04851 Type III restriction enzyme, res subunit AP9108_RS15465 PF08463 EcoEI R protein C-terminal AP9108_RS15465 PF00271 Helicase conserved C-terminal domain AP9108_RS15465 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS15470 PF00534 Glycosyl transferases group 1 AP9108_RS15470 PF13439 Glycosyltransferase Family 4 AP9108_RS15480 PF00155 Aminotransferase class I and II AP9108_RS15485 PF05151 Photosystem II reaction centre M protein (PsbM) AP9108_RS15490 PF08443 RimK-like ATP-grasp domain AP9108_RS15490 PF18030 RimK PreATP-grasp domain AP9108_RS15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS15525 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS15535 PF01551 Peptidase family M23 AP9108_RS15535 PF01476 LysM domain AP9108_RS15540 PF13180 PDZ domain AP9108_RS15560 PF07884 Vitamin K epoxide reductase family AP9108_RS15565 PF01207 Dihydrouridine synthase (Dus) AP9108_RS15570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AP9108_RS15570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AP9108_RS15625 PF00005 ABC transporter AP9108_RS15635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AP9108_RS15635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP9108_RS15640 PF04011 LemA family AP9108_RS15650 PF01523 Putative modulator of DNA gyrase AP9108_RS15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS15675 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS15700 PF01479 S4 domain AP9108_RS15700 PF01728 FtsJ-like methyltransferase AP9108_RS15705 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS15710 PF00502 Phycobilisome protein AP9108_RS15715 PF03951 Glutamine synthetase, beta-Grasp domain AP9108_RS15715 PF00120 Glutamine synthetase, catalytic domain AP9108_RS15720 PF01209 ubiE/COQ5 methyltransferase family AP9108_RS15805 PF03976 Polyphosphate kinase 2 (PPK2) AP9108_RS15820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AP9108_RS15820 PF00005 ABC transporter AP9108_RS15825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AP9108_RS15830 PF01479 S4 domain AP9108_RS15830 PF00579 tRNA synthetases class I (W and Y) AP9108_RS15835 PF00437 Type II/IV secretion system protein AP9108_RS15840 PF01467 Cytidylyltransferase-like AP9108_RS15870 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AP9108_RS15875 PF10674 Protein of unknown function (DUF2488) AP9108_RS15895 PF00348 Polyprenyl synthetase AP9108_RS15900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AP9108_RS15900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AP9108_RS15910 PF00582 Universal stress protein family AP9108_RS15915 PF00162 Phosphoglycerate kinase AP9108_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS15920 PF00072 Response regulator receiver domain AP9108_RS15920 PF09308 LuxQ, periplasmic AP9108_RS15920 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS15925 PF01926 50S ribosome-binding GTPase AP9108_RS15940 PF12965 Domain of unknown function (DUF3854) AP9108_RS15950 PF00535 Glycosyl transferase family 2 AP9108_RS15955 PF00072 Response regulator receiver domain AP9108_RS15955 PF01339 CheB methylesterase AP9108_RS15965 PF01636 Phosphotransferase enzyme family AP9108_RS16015 PF01507 Phosphoadenosine phosphosulfate reductase family AP9108_RS16025 PF00565 Staphylococcal nuclease homologue AP9108_RS16045 PF01207 Dihydrouridine synthase (Dus) AP9108_RS16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS16060 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS16060 PF00072 Response regulator receiver domain AP9108_RS16060 PF09308 LuxQ, periplasmic AP9108_RS16065 PF12848 ABC transporter AP9108_RS16065 PF16326 ABC transporter C-terminal domain AP9108_RS16065 PF00005 ABC transporter AP9108_RS16080 PF13326 Photosystem II Pbs27 AP9108_RS16090 PF13847 Methyltransferase domain AP9108_RS16095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP9108_RS16095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP9108_RS16095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP9108_RS16095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP9108_RS16100 PF00563 EAL domain AP9108_RS16100 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS16100 PF00360 Phytochrome region AP9108_RS16100 PF01590 GAF domain AP9108_RS16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS16105 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS16105 PF09308 LuxQ, periplasmic AP9108_RS16105 PF00072 Response regulator receiver domain AP9108_RS16160 PF01042 Endoribonuclease L-PSP AP9108_RS16165 PF01042 Endoribonuclease L-PSP AP9108_RS16170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AP9108_RS16170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP9108_RS16180 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AP9108_RS16185 PF00781 Diacylglycerol kinase catalytic domain AP9108_RS16200 PF06689 ClpX C4-type zinc finger AP9108_RS16200 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS16200 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS16205 PF00849 RNA pseudouridylate synthase AP9108_RS16205 PF01479 S4 domain AP9108_RS16215 PF12704 MacB-like periplasmic core domain AP9108_RS16215 PF02687 FtsX-like permease family AP9108_RS16215 PF00005 ABC transporter AP9108_RS16250 PF07689 KaiB domain AP9108_RS16250 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS16265 PF00551 Formyl transferase AP9108_RS16265 PF01842 ACT domain AP9108_RS16285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS16285 PF01348 Type II intron maturase AP9108_RS16315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AP9108_RS16315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AP9108_RS16360 PF10664 Cyanobacterial and plastid NDH-1 subunit M AP9108_RS16420 PF01348 Type II intron maturase AP9108_RS16420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS16545 PF00069 Protein kinase domain AP9108_RS16545 PF00805 Pentapeptide repeats (8 copies) AP9108_RS16555 PF03109 ABC1 family AP9108_RS16560 PF01476 LysM domain AP9108_RS16560 PF03734 L,D-transpeptidase catalytic domain AP9108_RS16570 PF00793 DAHP synthetase I family AP9108_RS16570 PF18152 DAHP synthase ferredoxin-like domain AP9108_RS16580 PF00312 Ribosomal protein S15 AP9108_RS16585 PF00924 Mechanosensitive ion channel AP9108_RS16625 PF12795 Mechanosensitive ion channel porin domain AP9108_RS16625 PF12794 Mechanosensitive ion channel inner membrane domain 1 AP9108_RS16625 PF00924 Mechanosensitive ion channel AP9108_RS16635 PF01709 Transcriptional regulator AP9108_RS16660 PF03793 PASTA domain AP9108_RS16660 PF00069 Protein kinase domain AP9108_RS16665 PF01625 Peptide methionine sulfoxide reductase AP9108_RS16670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AP9108_RS16680 PF01145 SPFH domain / Band 7 family AP9108_RS16690 PF00082 Subtilase family AP9108_RS16700 PF13416 Bacterial extracellular solute-binding protein AP9108_RS16705 PF08402 TOBE domain AP9108_RS16705 PF00005 ABC transporter AP9108_RS16865 PF01336 OB-fold nucleic acid binding domain AP9108_RS16865 PF00152 tRNA synthetases class II (D, K and N) AP9108_RS16900 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS16910 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS16910 PF07683 Cobalamin synthesis protein cobW C-terminal domain AP9108_RS16930 PF02421 Ferrous iron transport protein B AP9108_RS16930 PF07670 Nucleoside recognition AP9108_RS16930 PF17910 FeoB cytosolic helical domain AP9108_RS16930 PF07664 Ferrous iron transport protein B C terminus AP9108_RS16965 PF00487 Fatty acid desaturase AP9108_RS16975 PF00005 ABC transporter AP9108_RS16975 PF08402 TOBE domain AP9108_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS17015 PF01180 Dihydroorotate dehydrogenase AP9108_RS17030 PF09827 CRISPR associated protein Cas2 AP9108_RS17035 PF01867 CRISPR associated protein Cas1 AP9108_RS17085 PF03793 PASTA domain AP9108_RS17085 PF00069 Protein kinase domain AP9108_RS17180 PF03787 RAMP superfamily AP9108_RS17190 PF03787 RAMP superfamily AP9108_RS17200 PF18211 Csm1 subunit domain B AP9108_RS17200 PF01966 HD domain AP9108_RS17235 PF00427 Phycobilisome Linker polypeptide AP9108_RS17240 PF01554 MatE AP9108_RS17245 PF04851 Type III restriction enzyme, res subunit AP9108_RS17245 PF00271 Helicase conserved C-terminal domain AP9108_RS17245 PF12344 Ultra-violet resistance protein B AP9108_RS17245 PF17757 UvrB interaction domain AP9108_RS17245 PF02151 UvrB/uvrC motif AP9108_RS17250 PF00850 Histone deacetylase domain AP9108_RS17255 PF03989 DNA gyrase C-terminal domain, beta-propeller AP9108_RS17255 PF00521 DNA gyrase/topoisomerase IV, subunit A AP9108_RS17270 PF02548 Ketopantoate hydroxymethyltransferase AP9108_RS17275 PF02441 Flavoprotein AP9108_RS17285 PF01202 Shikimate kinase AP9108_RS17290 PF16124 RecQ zinc-binding AP9108_RS17290 PF00570 HRDC domain AP9108_RS17290 PF00271 Helicase conserved C-terminal domain AP9108_RS17290 PF09382 RQC domain AP9108_RS17290 PF00270 DEAD/DEAH box helicase AP9108_RS17310 PF09587 Bacterial capsule synthesis protein PGA_cap AP9108_RS17320 PF12323 Helix-turn-helix domain AP9108_RS17320 PF01385 Probable transposase AP9108_RS17320 PF07282 Putative transposase DNA-binding domain AP9108_RS17325 PF01195 Peptidyl-tRNA hydrolase AP9108_RS17330 PF02416 mttA/Hcf106 family AP9108_RS17335 PF00737 Photosystem II 10 kDa phosphoprotein AP9108_RS17340 PF02468 Photosystem II reaction centre N protein (psbN) AP9108_RS17345 PF01264 Chorismate synthase AP9108_RS17350 PF12706 Beta-lactamase superfamily domain AP9108_RS17355 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS17355 PF00072 Response regulator receiver domain AP9108_RS17355 PF01627 Hpt domain AP9108_RS17355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS17355 PF00672 HAMP domain AP9108_RS17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS17360 PF02633 Creatinine amidohydrolase AP9108_RS17370 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS17370 PF00072 Response regulator receiver domain AP9108_RS17380 PF00395 S-layer homology domain AP9108_RS17380 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS17385 PF00069 Protein kinase domain AP9108_RS17400 PF01699 Sodium/calcium exchanger protein AP9108_RS17415 PF01078 Magnesium chelatase, subunit ChlI AP9108_RS17415 PF13519 von Willebrand factor type A domain AP9108_RS17415 PF17863 AAA lid domain AP9108_RS17430 PF00005 ABC transporter AP9108_RS17430 PF00664 ABC transporter transmembrane region AP9108_RS17505 PF00684 DnaJ central domain AP9108_RS17505 PF01556 DnaJ C terminal domain AP9108_RS17505 PF00226 DnaJ domain AP9108_RS17510 PF00574 Clp protease AP9108_RS17515 PF00574 Clp protease AP9108_RS17520 PF00574 Clp protease AP9108_RS17525 PF00092 von Willebrand factor type A domain AP9108_RS17530 PF00625 Guanylate kinase AP9108_RS17535 PF04025 Domain of unknown function (DUF370) AP9108_RS17705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS17705 PF01348 Type II intron maturase AP9108_RS17885 PF00069 Protein kinase domain AP9108_RS17885 PF00805 Pentapeptide repeats (8 copies) AP9108_RS17895 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AP9108_RS17915 PF00535 Glycosyl transferase family 2 AP9108_RS17965 PF14437 MafB19-like deaminase AP9108_RS17970 PF01553 Acyltransferase AP9108_RS18005 PF00155 Aminotransferase class I and II AP9108_RS18015 PF00919 Uncharacterized protein family UPF0004 AP9108_RS18015 PF18693 TRAM domain AP9108_RS18015 PF04055 Radical SAM superfamily AP9108_RS18025 PF10150 Ribonuclease E/G family AP9108_RS18030 PF01351 Ribonuclease HII AP9108_RS18045 PF01842 ACT domain AP9108_RS18045 PF00800 Prephenate dehydratase AP9108_RS18045 PF01817 Chorismate mutase type II AP9108_RS18050 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS18050 PF05362 Lon protease (S16) C-terminal proteolytic domain AP9108_RS18050 PF02190 ATP-dependent protease La (LON) substrate-binding domain AP9108_RS18055 PF00338 Ribosomal protein S10p/S20e AP9108_RS18060 PF03144 Elongation factor Tu domain 2 AP9108_RS18060 PF03143 Elongation factor Tu C-terminal domain AP9108_RS18060 PF00009 Elongation factor Tu GTP binding domain AP9108_RS18065 PF00679 Elongation factor G C-terminus AP9108_RS18065 PF03764 Elongation factor G, domain IV AP9108_RS18065 PF00009 Elongation factor Tu GTP binding domain AP9108_RS18065 PF03144 Elongation factor Tu domain 2 AP9108_RS18065 PF14492 Elongation Factor G, domain II AP9108_RS18070 PF00177 Ribosomal protein S7p/S5e AP9108_RS18075 PF00164 Ribosomal protein S12/S23 AP9108_RS18080 PF01521 Iron-sulphur cluster biosynthesis AP9108_RS18085 PF00483 Nucleotidyl transferase AP9108_RS18085 PF01050 Mannose-6-phosphate isomerase AP9108_RS18100 PF00072 Response regulator receiver domain AP9108_RS18100 PF09308 LuxQ, periplasmic AP9108_RS18100 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS18100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS18110 PF01661 Macro domain AP9108_RS18140 PF02602 Uroporphyrinogen-III synthase HemD AP9108_RS18150 PF00672 HAMP domain AP9108_RS18150 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS18155 PF14495 Cytochrome c-550 domain AP9108_RS18165 PF17848 Acetyl-coA carboxylase zinc finger domain AP9108_RS18165 PF01039 Carboxyl transferase domain AP9108_RS18185 PF06750 Bacterial Peptidase A24 N-terminal domain AP9108_RS18185 PF01478 Type IV leader peptidase family AP9108_RS18205 PF00535 Glycosyl transferase family 2 AP9108_RS18220 PF00072 Response regulator receiver domain AP9108_RS18220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS18220 PF01627 Hpt domain AP9108_RS18220 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS18220 PF00672 HAMP domain AP9108_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS18230 PF00905 Penicillin binding protein transpeptidase domain AP9108_RS18230 PF00912 Transglycosylase AP9108_RS18240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS18240 PF01348 Type II intron maturase AP9108_RS18260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS18260 PF01348 Type II intron maturase AP9108_RS18295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AP9108_RS18295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AP9108_RS18310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP9108_RS18370 PF00101 Ribulose bisphosphate carboxylase, small chain AP9108_RS18415 PF03900 Porphobilinogen deaminase, C-terminal domain AP9108_RS18415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AP9108_RS18765 PF00005 ABC transporter AP9108_RS18765 PF00664 ABC transporter transmembrane region AP9108_RS18770 PF00400 WD domain, G-beta repeat AP9108_RS18790 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS18790 PF00483 Nucleotidyl transferase AP9108_RS18795 PF01266 FAD dependent oxidoreductase AP9108_RS18795 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AP9108_RS18810 PF00796 Photosystem I reaction centre subunit VIII AP9108_RS18815 PF02605 Photosystem I reaction centre subunit XI AP9108_RS18820 PF00535 Glycosyl transferase family 2 AP9108_RS18825 PF01730 UreF AP9108_RS18830 PF05194 UreE urease accessory protein, C-terminal domain AP9108_RS18830 PF02814 UreE urease accessory protein, N-terminal domain AP9108_RS18835 PF00762 Ferrochelatase AP9108_RS18840 PF08241 Methyltransferase domain AP9108_RS18845 PF01241 Photosystem I psaG / psaK AP9108_RS18855 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS18870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AP9108_RS18875 PF00498 FHA domain AP9108_RS18875 PF12773 Double zinc ribbon AP9108_RS18885 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS18885 PF00498 FHA domain AP9108_RS18885 PF03704 Bacterial transcriptional activator domain AP9108_RS18905 PF03683 Uncharacterised protein family (UPF0175) AP9108_RS18915 PF01556 DnaJ C terminal domain AP9108_RS18915 PF00684 DnaJ central domain AP9108_RS18915 PF00226 DnaJ domain AP9108_RS19085 PF01348 Type II intron maturase AP9108_RS19085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS19090 PF01348 Type II intron maturase AP9108_RS19090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS19120 PF01420 Type I restriction modification DNA specificity domain AP9108_RS19125 PF01420 Type I restriction modification DNA specificity domain AP9108_RS19130 PF02384 N-6 DNA Methylase AP9108_RS19130 PF12161 HsdM N-terminal domain AP9108_RS19150 PF11867 Domain of unknown function (DUF3387) AP9108_RS19150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS19150 PF18766 SWI2/SNF2 ATPase AP9108_RS19160 PF18766 SWI2/SNF2 ATPase AP9108_RS19160 PF11867 Domain of unknown function (DUF3387) AP9108_RS19160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS19165 PF11867 Domain of unknown function (DUF3387) AP9108_RS19165 PF18766 SWI2/SNF2 ATPase AP9108_RS19165 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS19170 PF18766 SWI2/SNF2 ATPase AP9108_RS19170 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AP9108_RS19170 PF11867 Domain of unknown function (DUF3387) AP9108_RS19240 PF04055 Radical SAM superfamily AP9108_RS19395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS19395 PF01348 Type II intron maturase AP9108_RS19455 PF00583 Acetyltransferase (GNAT) family AP9108_RS19480 PF12697 Alpha/beta hydrolase family AP9108_RS19485 PF00583 Acetyltransferase (GNAT) family AP9108_RS19490 PF00534 Glycosyl transferases group 1 AP9108_RS19490 PF08323 Starch synthase catalytic domain AP9108_RS19500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP9108_RS19500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP9108_RS19500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP9108_RS19500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP9108_RS19510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP9108_RS19510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP9108_RS19510 PF00205 Thiamine pyrophosphate enzyme, central domain AP9108_RS19515 PF00543 Nitrogen regulatory protein P-II AP9108_RS19520 PF01725 Ham1 family AP9108_RS19530 PF08386 TAP-like protein AP9108_RS19530 PF00561 alpha/beta hydrolase fold AP9108_RS19535 PF08364 Bacterial translation initiation factor IF-2 associated region AP9108_RS19535 PF11987 Translation-initiation factor 2 AP9108_RS19535 PF04760 Translation initiation factor IF-2, N-terminal region AP9108_RS19535 PF00009 Elongation factor Tu GTP binding domain AP9108_RS19540 PF03190 Protein of unknown function, DUF255 AP9108_RS19550 PF00899 ThiF family AP9108_RS19550 PF00581 Rhodanese-like domain AP9108_RS19555 PF09308 LuxQ, periplasmic AP9108_RS19555 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS19555 PF00072 Response regulator receiver domain AP9108_RS19555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS19560 PF08446 PAS fold AP9108_RS19560 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS19560 PF00360 Phytochrome region AP9108_RS19560 PF01590 GAF domain AP9108_RS19565 PF13181 Tetratricopeptide repeat AP9108_RS19565 PF01435 Peptidase family M48 AP9108_RS19570 PF00563 EAL domain AP9108_RS19570 PF17154 Gammaproteobacterial periplasmic sensor domain AP9108_RS19570 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS19570 PF00672 HAMP domain AP9108_RS19625 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AP9108_RS19685 PF01850 PIN domain AP9108_RS19690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS19700 PF04143 Sulphur transport AP9108_RS19710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AP9108_RS19710 PF01842 ACT domain AP9108_RS19710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AP9108_RS19745 PF00069 Protein kinase domain AP9108_RS19745 PF00805 Pentapeptide repeats (8 copies) AP9108_RS19775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AP9108_RS19795 PF13614 AAA domain AP9108_RS19800 PF01648 4'-phosphopantetheinyl transferase superfamily AP9108_RS19815 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS19815 PF17862 AAA+ lid domain AP9108_RS19815 PF01434 Peptidase family M41 AP9108_RS19815 PF06480 FtsH Extracellular AP9108_RS19820 PF05195 Aminopeptidase P, N-terminal domain AP9108_RS19820 PF00557 Metallopeptidase family M24 AP9108_RS19835 PF00101 Ribulose bisphosphate carboxylase, small chain AP9108_RS19840 PF02341 RbcX protein AP9108_RS19845 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AP9108_RS19845 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AP9108_RS19850 PF03466 LysR substrate binding domain AP9108_RS19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP9108_RS19875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AP9108_RS19875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AP9108_RS19895 PF00684 DnaJ central domain AP9108_RS19895 PF00226 DnaJ domain AP9108_RS19895 PF01556 DnaJ C terminal domain AP9108_RS19920 PF00124 Photosynthetic reaction centre protein AP9108_RS19940 PF05685 Putative restriction endonuclease AP9108_RS19945 PF00124 Photosynthetic reaction centre protein AP9108_RS19950 PF04055 Radical SAM superfamily AP9108_RS19965 PF05729 NACHT domain AP9108_RS19965 PF00805 Pentapeptide repeats (8 copies) AP9108_RS19965 PF00400 WD domain, G-beta repeat AP9108_RS19970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AP9108_RS19980 PF00436 Single-strand binding protein family AP9108_RS19990 PF02954 Bacterial regulatory protein, Fis family AP9108_RS19990 PF00158 Sigma-54 interaction domain AP9108_RS19990 PF00072 Response regulator receiver domain AP9108_RS19995 PF01209 ubiE/COQ5 methyltransferase family AP9108_RS20000 PF04286 Protein of unknown function (DUF445) AP9108_RS20005 PF07670 Nucleoside recognition AP9108_RS20005 PF01773 Na+ dependent nucleoside transporter N-terminus AP9108_RS20005 PF07662 Na+ dependent nucleoside transporter C-terminus AP9108_RS20010 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AP9108_RS20010 PF01926 50S ribosome-binding GTPase AP9108_RS20015 PF02361 Cobalt transport protein AP9108_RS20030 PF04472 Cell division protein SepF AP9108_RS20035 PF03807 NADP oxidoreductase coenzyme F420-dependent AP9108_RS20035 PF14748 Pyrroline-5-carboxylate reductase dimerisation AP9108_RS20040 PF02660 Glycerol-3-phosphate acyltransferase AP9108_RS20125 PF02780 Transketolase, C-terminal domain AP9108_RS20125 PF02779 Transketolase, pyrimidine binding domain AP9108_RS20125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AP9108_RS20130 PF00535 Glycosyl transferase family 2 AP9108_RS20140 PF01467 Cytidylyltransferase-like AP9108_RS20140 PF00294 pfkB family carbohydrate kinase AP9108_RS20160 PF00092 von Willebrand factor type A domain AP9108_RS20175 PF00294 pfkB family carbohydrate kinase AP9108_RS20175 PF01467 Cytidylyltransferase-like AP9108_RS20185 PF05419 GUN4-like AP9108_RS20185 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS20215 PF03958 Bacterial type II/III secretion system short domain AP9108_RS20215 PF00263 Bacterial type II and III secretion system protein AP9108_RS20220 PF00216 Bacterial DNA-binding protein AP9108_RS20225 PF00155 Aminotransferase class I and II AP9108_RS20235 PF12826 Helix-hairpin-helix motif AP9108_RS20235 PF02151 UvrB/uvrC motif AP9108_RS20235 PF01541 GIY-YIG catalytic domain AP9108_RS20235 PF08459 UvrC Helix-hairpin-helix N-terminal AP9108_RS20240 PF00067 Cytochrome P450 AP9108_RS20255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AP9108_RS20255 PF03033 Glycosyltransferase family 28 N-terminal domain AP9108_RS20270 PF00348 Polyprenyl synthetase AP9108_RS20290 PF01266 FAD dependent oxidoreductase AP9108_RS20315 PF01435 Peptidase family M48 AP9108_RS20320 PF04011 LemA family AP9108_RS20325 PF00155 Aminotransferase class I and II AP9108_RS20345 PF06745 KaiC AP9108_RS20345 PF18073 Rubredoxin metal binding domain AP9108_RS20350 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS20350 PF00072 Response regulator receiver domain AP9108_RS20380 PF00571 CBS domain AP9108_RS20380 PF03448 MgtE intracellular N domain AP9108_RS20380 PF01769 Divalent cation transporter AP9108_RS20385 PF01926 50S ribosome-binding GTPase AP9108_RS20385 PF01018 GTP1/OBG AP9108_RS20420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AP9108_RS20420 PF14572 Phosphoribosyl synthetase-associated domain AP9108_RS20425 PF00069 Protein kinase domain AP9108_RS20445 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS20455 PF00873 AcrB/AcrD/AcrF family AP9108_RS20475 PF17810 Arginine decarboxylase helical bundle domain AP9108_RS20475 PF17944 Arginine decarboxylase C-terminal helical extension AP9108_RS20475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AP9108_RS20480 PF00483 Nucleotidyl transferase AP9108_RS20485 PF02446 4-alpha-glucanotransferase AP9108_RS20495 PF02446 4-alpha-glucanotransferase AP9108_RS20515 PF03808 Glycosyl transferase WecB/TagA/CpsF family AP9108_RS20525 PF03079 ARD/ARD' family AP9108_RS20540 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS20545 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS20545 PF00072 Response regulator receiver domain AP9108_RS20550 PF00072 Response regulator receiver domain AP9108_RS20550 PF00196 Bacterial regulatory proteins, luxR family AP9108_RS20555 PF00072 Response regulator receiver domain AP9108_RS20555 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS20560 PF01336 OB-fold nucleic acid binding domain AP9108_RS20560 PF00152 tRNA synthetases class II (D, K and N) AP9108_RS20560 PF02938 GAD domain AP9108_RS20580 PF01850 PIN domain AP9108_RS20595 PF00958 GMP synthase C terminal domain AP9108_RS20595 PF00117 Glutamine amidotransferase class-I AP9108_RS20595 PF02540 NAD synthase AP9108_RS20620 PF00266 Aminotransferase class-V AP9108_RS20645 PF02384 N-6 DNA Methylase AP9108_RS20695 PF00266 Aminotransferase class-V AP9108_RS20705 PF06508 Queuosine biosynthesis protein QueC AP9108_RS20710 PF00902 Sec-independent protein translocase protein (TatC) AP9108_RS20730 PF01434 Peptidase family M41 AP9108_RS20730 PF06480 FtsH Extracellular AP9108_RS20730 PF17862 AAA+ lid domain AP9108_RS20730 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS20740 PF00535 Glycosyl transferase family 2 AP9108_RS20750 PF17728 BsuBI/PstI restriction endonuclease HTH domain AP9108_RS20750 PF06616 BsuBI/PstI restriction endonuclease domain AP9108_RS20755 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS20760 PF02350 UDP-N-acetylglucosamine 2-epimerase AP9108_RS20765 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS20765 PF00563 EAL domain AP9108_RS20765 PF00360 Phytochrome region AP9108_RS20765 PF01590 GAF domain AP9108_RS20770 PF00849 RNA pseudouridylate synthase AP9108_RS20780 PF08245 Mur ligase middle domain AP9108_RS20780 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS20790 PF00936 BMC domain AP9108_RS20805 PF03319 Ethanolamine utilisation protein EutN/carboxysome AP9108_RS20810 PF00936 BMC domain AP9108_RS20815 PF00936 BMC domain AP9108_RS20820 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AP9108_RS20820 PF00361 Proton-conducting membrane transporter AP9108_RS20820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP9108_RS20825 PF00361 Proton-conducting membrane transporter AP9108_RS20835 PF00005 ABC transporter AP9108_RS20835 PF00664 ABC transporter transmembrane region AP9108_RS20855 PF02675 S-adenosylmethionine decarboxylase AP9108_RS20860 PF02086 D12 class N6 adenine-specific DNA methyltransferase AP9108_RS20875 PF01348 Type II intron maturase AP9108_RS20875 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS20880 PF08402 TOBE domain AP9108_RS20880 PF00005 ABC transporter AP9108_RS20885 PF13416 Bacterial extracellular solute-binding protein AP9108_RS20890 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS20895 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS20900 PF06574 FAD synthetase AP9108_RS20900 PF01687 Riboflavin kinase AP9108_RS20915 PF17863 AAA lid domain AP9108_RS20915 PF07726 ATPase family associated with various cellular activities (AAA) AP9108_RS20930 PF03186 CobD/Cbib protein AP9108_RS20935 PF00156 Phosphoribosyl transferase domain AP9108_RS20940 PF01070 FMN-dependent dehydrogenase AP9108_RS20945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AP9108_RS20955 PF10017 Histidine-specific methyltransferase, SAM-dependent AP9108_RS20960 PF00830 Ribosomal L28 family AP9108_RS20965 PF13368 Topoisomerase C-terminal repeat AP9108_RS20965 PF01751 Toprim domain AP9108_RS20965 PF01131 DNA topoisomerase AP9108_RS20975 PF00675 Insulinase (Peptidase family M16) AP9108_RS20975 PF05193 Peptidase M16 inactive domain AP9108_RS20980 PF03649 Uncharacterised protein family (UPF0014) AP9108_RS20985 PF00005 ABC transporter AP9108_RS20985 PF09383 NIL domain AP9108_RS20990 PF00563 EAL domain AP9108_RS20990 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS20990 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS21010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS21010 PF00204 DNA gyrase B AP9108_RS21010 PF01751 Toprim domain AP9108_RS21010 PF00986 DNA gyrase B subunit, carboxyl terminus AP9108_RS21020 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS21020 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS21020 PF06689 ClpX C4-type zinc finger AP9108_RS21025 PF00574 Clp protease AP9108_RS21030 PF05697 Bacterial trigger factor protein (TF) AP9108_RS21030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AP9108_RS21030 PF05698 Bacterial trigger factor protein (TF) C-terminus AP9108_RS21035 PF02774 Semialdehyde dehydrogenase, dimerisation domain AP9108_RS21035 PF01118 Semialdehyde dehydrogenase, NAD binding domain AP9108_RS21040 PF00701 Dihydrodipicolinate synthetase family AP9108_RS21045 PF00753 Metallo-beta-lactamase superfamily AP9108_RS21045 PF17770 Ribonuclease J C-terminal domain AP9108_RS21045 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AP9108_RS21050 PF02954 Bacterial regulatory protein, Fis family AP9108_RS21050 PF00989 PAS fold AP9108_RS21050 PF00158 Sigma-54 interaction domain AP9108_RS21060 PF13378 Enolase C-terminal domain-like AP9108_RS21070 PF13614 AAA domain AP9108_RS21075 PF00561 alpha/beta hydrolase fold AP9108_RS21085 PF08447 PAS fold AP9108_RS21085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS21085 PF08448 PAS fold AP9108_RS21090 PF13188 PAS domain AP9108_RS21090 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS21090 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS21090 PF00563 EAL domain AP9108_RS21095 PF03448 MgtE intracellular N domain AP9108_RS21095 PF00571 CBS domain AP9108_RS21095 PF01769 Divalent cation transporter AP9108_RS21110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS21110 PF01348 Type II intron maturase AP9108_RS21130 PF01348 Type II intron maturase AP9108_RS21130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS21155 PF00575 S1 RNA binding domain AP9108_RS21155 PF03725 3' exoribonuclease family, domain 2 AP9108_RS21155 PF00013 KH domain AP9108_RS21155 PF01138 3' exoribonuclease family, domain 1 AP9108_RS21155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AP9108_RS21160 PF00271 Helicase conserved C-terminal domain AP9108_RS21160 PF12419 SNF2 Helicase protein AP9108_RS21160 PF00176 SNF2 family N-terminal domain AP9108_RS21180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS21180 PF01348 Type II intron maturase AP9108_RS21195 PF00502 Phycobilisome protein AP9108_RS21200 PF01938 TRAM domain AP9108_RS21200 PF13847 Methyltransferase domain AP9108_RS21210 PF05690 Thiazole biosynthesis protein ThiG AP9108_RS21210 PF01266 FAD dependent oxidoreductase AP9108_RS21370 PF07670 Nucleoside recognition AP9108_RS21370 PF02421 Ferrous iron transport protein B AP9108_RS21370 PF17910 FeoB cytosolic helical domain AP9108_RS21370 PF07664 Ferrous iron transport protein B C terminus AP9108_RS21375 PF02421 Ferrous iron transport protein B AP9108_RS21375 PF07664 Ferrous iron transport protein B C terminus AP9108_RS21375 PF07670 Nucleoside recognition AP9108_RS21390 PF00270 DEAD/DEAH box helicase AP9108_RS21390 PF00271 Helicase conserved C-terminal domain AP9108_RS21390 PF02559 CarD-like/TRCF domain AP9108_RS21390 PF03461 TRCF domain AP9108_RS21390 PF17757 UvrB interaction domain AP9108_RS21395 PF00005 ABC transporter AP9108_RS21400 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase AP9108_RS21400 PF00749 tRNA synthetases class I (E and Q), catalytic domain AP9108_RS21410 PF00805 Pentapeptide repeats (8 copies) AP9108_RS21410 PF00069 Protein kinase domain AP9108_RS21415 PF00107 Zinc-binding dehydrogenase AP9108_RS21415 PF08240 Alcohol dehydrogenase GroES-like domain AP9108_RS21420 PF00465 Iron-containing alcohol dehydrogenase AP9108_RS21420 PF00171 Aldehyde dehydrogenase family AP9108_RS21425 PF00400 WD domain, G-beta repeat AP9108_RS21425 PF00931 NB-ARC domain AP9108_RS21430 PF00326 Prolyl oligopeptidase family AP9108_RS21440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AP9108_RS21440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS21465 PF00690 Cation transporter/ATPase, N-terminus AP9108_RS21465 PF00689 Cation transporting ATPase, C-terminus AP9108_RS21470 PF00581 Rhodanese-like domain AP9108_RS21480 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AP9108_RS21500 PF17284 Spermidine synthase tetramerisation domain AP9108_RS21515 PF02618 YceG-like family AP9108_RS21520 PF06949 Protein of unknown function (DUF1292) AP9108_RS21525 PF03652 Holliday junction resolvase AP9108_RS21570 PF00829 Ribosomal prokaryotic L21 protein AP9108_RS21580 PF01016 Ribosomal L27 protein AP9108_RS21600 PF06745 KaiC AP9108_RS21605 PF07689 KaiB domain AP9108_RS21610 PF07688 KaiA C-terminal domain AP9108_RS21630 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS21630 PF01590 GAF domain AP9108_RS21630 PF00563 EAL domain AP9108_RS21630 PF00360 Phytochrome region AP9108_RS21635 PF08369 Proto-chlorophyllide reductase 57 kD subunit AP9108_RS21635 PF00148 Nitrogenase component 1 type Oxidoreductase AP9108_RS21660 PF05670 NFACT protein RNA binding domain AP9108_RS21665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AP9108_RS21685 PF01451 Low molecular weight phosphotyrosine protein phosphatase AP9108_RS21690 PF03358 NADPH-dependent FMN reductase AP9108_RS21695 PF01758 Sodium Bile acid symporter family AP9108_RS21805 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS21850 PF00480 ROK family AP9108_RS21905 PF00355 Rieske [2Fe-2S] domain AP9108_RS21910 PF01333 Apocytochrome F, C-terminal AP9108_RS21910 PF16639 Apocytochrome F, N-terminal AP9108_RS21920 PF18579 Rubisco accumulation factor 1 helix turn helix domain AP9108_RS21920 PF18578 Rubisco accumulation factor 1 alpha helical domain AP9108_RS21920 PF18087 Rubisco Assembly chaperone C-terminal domain AP9108_RS21985 PF00171 Aldehyde dehydrogenase family AP9108_RS21995 PF06838 Methionine gamma-lyase AP9108_RS22015 PF00072 Response regulator receiver domain AP9108_RS22035 PF17886 HSP20-like domain found in ArsA AP9108_RS22035 PF02374 Anion-transporting ATPase AP9108_RS22130 PF00575 S1 RNA binding domain AP9108_RS22130 PF03725 3' exoribonuclease family, domain 2 AP9108_RS22130 PF01138 3' exoribonuclease family, domain 1 AP9108_RS22130 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AP9108_RS22130 PF00013 KH domain AP9108_RS22155 PF00578 AhpC/TSA family AP9108_RS22160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AP9108_RS22175 PF00580 UvrD/REP helicase N-terminal domain AP9108_RS22175 PF13361 UvrD-like helicase C-terminal domain AP9108_RS22185 PF14718 Soluble lytic murein transglycosylase L domain AP9108_RS22185 PF01464 Transglycosylase SLT domain AP9108_RS22200 PF01116 Fructose-bisphosphate aldolase class-II AP9108_RS22210 PF01263 Aldose 1-epimerase AP9108_RS22215 PF09587 Bacterial capsule synthesis protein PGA_cap AP9108_RS22225 PF12706 Beta-lactamase superfamily domain AP9108_RS22225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AP9108_RS22230 PF13640 2OG-Fe(II) oxygenase superfamily AP9108_RS22235 PF13640 2OG-Fe(II) oxygenase superfamily AP9108_RS22280 PF00999 Sodium/hydrogen exchanger family AP9108_RS22285 PF00977 Histidine biosynthesis protein AP9108_RS22290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AP9108_RS22330 PF08448 PAS fold AP9108_RS22330 PF08447 PAS fold AP9108_RS22330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS22335 PF02069 Prokaryotic metallothionein AP9108_RS22340 PF01022 Bacterial regulatory protein, arsR family AP9108_RS22345 PF00175 Oxidoreductase NAD-binding domain AP9108_RS22350 PF02529 Cytochrome B6-F complex subunit 5 AP9108_RS22385 PF00069 Protein kinase domain AP9108_RS22385 PF00805 Pentapeptide repeats (8 copies) AP9108_RS22390 PF00069 Protein kinase domain AP9108_RS22390 PF00805 Pentapeptide repeats (8 copies) AP9108_RS22395 PF00805 Pentapeptide repeats (8 copies) AP9108_RS22395 PF00069 Protein kinase domain AP9108_RS22400 PF00069 Protein kinase domain AP9108_RS22400 PF00805 Pentapeptide repeats (8 copies) AP9108_RS22415 PF00875 DNA photolyase AP9108_RS22415 PF03441 FAD binding domain of DNA photolyase AP9108_RS22425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AP9108_RS22435 PF04055 Radical SAM superfamily AP9108_RS22440 PF17092 Penicillin-binding protein OB-like domain AP9108_RS22440 PF00905 Penicillin binding protein transpeptidase domain AP9108_RS22440 PF00912 Transglycosylase AP9108_RS22455 PF13614 AAA domain AP9108_RS22465 PF00207 Alpha-2-macroglobulin family AP9108_RS22465 PF01835 MG2 domain AP9108_RS22465 PF07703 Alpha-2-macroglobulin bait region domain AP9108_RS22465 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AP9108_RS22470 PF02685 Glucokinase AP9108_RS22475 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AP9108_RS22475 PF09363 XFP C-terminal domain AP9108_RS22475 PF09364 XFP N-terminal domain AP9108_RS22480 PF00871 Acetokinase family AP9108_RS22485 PF00676 Dehydrogenase E1 component AP9108_RS22490 PF00684 DnaJ central domain AP9108_RS22490 PF01556 DnaJ C terminal domain AP9108_RS22490 PF00226 DnaJ domain AP9108_RS22515 PF02540 NAD synthase AP9108_RS22580 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS22635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AP9108_RS22640 PF00919 Uncharacterized protein family UPF0004 AP9108_RS22640 PF18693 TRAM domain AP9108_RS22640 PF04055 Radical SAM superfamily AP9108_RS22645 PF00924 Mechanosensitive ion channel AP9108_RS22795 PF00005 ABC transporter AP9108_RS22820 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS22820 PF00989 PAS fold AP9108_RS22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS22825 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AP9108_RS22830 PF12706 Beta-lactamase superfamily domain AP9108_RS22835 PF01593 Flavin containing amine oxidoreductase AP9108_RS22850 PF01434 Peptidase family M41 AP9108_RS22850 PF06480 FtsH Extracellular AP9108_RS22850 PF17862 AAA+ lid domain AP9108_RS22850 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS22885 PF00092 von Willebrand factor type A domain AP9108_RS22920 PF00374 Nickel-dependent hydrogenase AP9108_RS22925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AP9108_RS22930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AP9108_RS22930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AP9108_RS22930 PF01568 Molydopterin dinucleotide binding domain AP9108_RS22930 PF13237 4Fe-4S dicluster domain AP9108_RS22930 PF00384 Molybdopterin oxidoreductase AP9108_RS22935 PF03063 Prismane/CO dehydrogenase family AP9108_RS22940 PF00037 4Fe-4S binding domain AP9108_RS22940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AP9108_RS22940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AP9108_RS22945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AP9108_RS22945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AP9108_RS22950 PF01455 HupF/HypC family AP9108_RS22955 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AP9108_RS22955 PF10371 Domain of unknown function AP9108_RS22955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AP9108_RS22955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP9108_RS22955 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AP9108_RS22960 PF01180 Dihydroorotate dehydrogenase AP9108_RS22970 PF03109 ABC1 family AP9108_RS22975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AP9108_RS22980 PF03649 Uncharacterised protein family (UPF0014) AP9108_RS23000 PF01165 Ribosomal protein S21 AP9108_RS23005 PF00672 HAMP domain AP9108_RS23005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS23005 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS23035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS23035 PF01348 Type II intron maturase AP9108_RS23045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS23045 PF01348 Type II intron maturase AP9108_RS23055 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS23070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS23070 PF01348 Type II intron maturase AP9108_RS23080 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS23080 PF17871 AAA lid domain AP9108_RS23080 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS23080 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS23080 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS23085 PF17149 Periplasmic sensor domain found in signal transduction proteins AP9108_RS23085 PF00672 HAMP domain AP9108_RS23085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS23085 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS23085 PF01627 Hpt domain AP9108_RS23085 PF00072 Response regulator receiver domain AP9108_RS23110 PF02686 Glu-tRNAGln amidotransferase C subunit AP9108_RS23120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS23120 PF01348 Type II intron maturase AP9108_RS23150 PF00072 Response regulator receiver domain AP9108_RS23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS23150 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS23150 PF01627 Hpt domain AP9108_RS23150 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP9108_RS23150 PF00989 PAS fold AP9108_RS23165 PF00072 Response regulator receiver domain AP9108_RS23170 PF13180 PDZ domain AP9108_RS23175 PF02684 Lipid-A-disaccharide synthetase AP9108_RS23180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AP9108_RS23180 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS23185 PF07977 FabA-like domain AP9108_RS23190 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AP9108_RS23220 PF00188 Cysteine-rich secretory protein family AP9108_RS23380 PF08323 Starch synthase catalytic domain AP9108_RS23380 PF00534 Glycosyl transferases group 1 AP9108_RS23455 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS23455 PF01348 Type II intron maturase AP9108_RS23480 PF03193 RsgA GTPase AP9108_RS23480 PF16745 RsgA N-terminal domain AP9108_RS23495 PF13932 GidA associated domain AP9108_RS23495 PF01134 Glucose inhibited division protein A AP9108_RS23555 PF01593 Flavin containing amine oxidoreductase AP9108_RS23565 PF09278 MerR, DNA binding AP9108_RS23565 PF00376 MerR family regulatory protein AP9108_RS23660 PF01841 Transglutaminase-like superfamily AP9108_RS23670 PF08479 POTRA domain, ShlB-type AP9108_RS23670 PF17287 POTRA domain AP9108_RS23670 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AP9108_RS23675 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AP9108_RS23685 PF00148 Nitrogenase component 1 type Oxidoreductase AP9108_RS23700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS23700 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS23700 PF09308 LuxQ, periplasmic AP9108_RS23700 PF00072 Response regulator receiver domain AP9108_RS23705 PF00579 tRNA synthetases class I (W and Y) AP9108_RS23740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS23740 PF00672 HAMP domain AP9108_RS23740 PF01627 Hpt domain AP9108_RS23740 PF00072 Response regulator receiver domain AP9108_RS23740 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS23740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS23745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS23760 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS23765 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS23770 PF05685 Putative restriction endonuclease AP9108_RS23775 PF05685 Putative restriction endonuclease AP9108_RS23805 PF01850 PIN domain AP9108_RS23815 PF00133 tRNA synthetases class I (I, L, M and V) AP9108_RS23815 PF06827 Zinc finger found in FPG and IleRS AP9108_RS23815 PF08264 Anticodon-binding domain of tRNA AP9108_RS23820 PF05969 Photosystem II complex subunit Ycf12 AP9108_RS23825 PF14251 Domain of unknown function (DUF4346) AP9108_RS23830 PF00317 Ribonucleotide reductase, all-alpha domain AP9108_RS23830 PF02867 Ribonucleotide reductase, barrel domain AP9108_RS23830 PF03477 ATP cone domain AP9108_RS23835 PF00268 Ribonucleotide reductase, small chain AP9108_RS23850 PF00557 Metallopeptidase family M24 AP9108_RS23855 PF00072 Response regulator receiver domain AP9108_RS23855 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS23870 PF00999 Sodium/hydrogen exchanger family AP9108_RS23870 PF03471 Transporter associated domain AP9108_RS23875 PF01183 Glycosyl hydrolases family 25 AP9108_RS23880 PF01209 ubiE/COQ5 methyltransferase family AP9108_RS23885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AP9108_RS23890 PF12911 N-terminal TM domain of oligopeptide transport permease C AP9108_RS23890 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS23895 PF04545 Sigma-70, region 4 AP9108_RS23895 PF04539 Sigma-70 region 3 AP9108_RS23895 PF04542 Sigma-70 region 2 AP9108_RS23895 PF00140 Sigma-70 factor, region 1.2 AP9108_RS23900 PF00171 Aldehyde dehydrogenase family AP9108_RS23905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AP9108_RS23905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AP9108_RS23905 PF00205 Thiamine pyrophosphate enzyme, central domain AP9108_RS23915 PF01557 Fumarylacetoacetate (FAA) hydrolase family AP9108_RS23920 PF01888 CbiD AP9108_RS23945 PF02308 MgtC family AP9108_RS23950 PF00128 Alpha amylase, catalytic domain AP9108_RS23950 PF16657 Maltogenic Amylase, C-terminal domain AP9108_RS23955 PF01979 Amidohydrolase family AP9108_RS23965 PF00171 Aldehyde dehydrogenase family AP9108_RS23985 PF00072 Response regulator receiver domain AP9108_RS23985 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS23990 PF16166 Chloroplast import apparatus Tic20-like AP9108_RS24010 PF00953 Glycosyl transferase family 4 AP9108_RS24015 PF00994 Probable molybdopterin binding domain AP9108_RS24015 PF02464 Competence-damaged protein AP9108_RS24015 PF18146 Damage-inducible protein CinA KH domain AP9108_RS24025 PF01220 Dehydroquinase class II AP9108_RS24060 PF01966 HD domain AP9108_RS24060 PF07697 7TM-HD extracellular AP9108_RS24060 PF07698 7TM receptor with intracellular HD hydrolase AP9108_RS24070 PF09334 tRNA synthetases class I (M) AP9108_RS24070 PF08264 Anticodon-binding domain of tRNA AP9108_RS24070 PF13603 Leucyl-tRNA synthetase, Domain 2 AP9108_RS24070 PF00133 tRNA synthetases class I (I, L, M and V) AP9108_RS24095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AP9108_RS24095 PF02272 DHHA1 domain AP9108_RS24095 PF01411 tRNA synthetases class II (A) AP9108_RS24110 PF00849 RNA pseudouridylate synthase AP9108_RS24115 PF09620 CRISPR-associated protein (Cas_csx3) AP9108_RS24130 PF13361 UvrD-like helicase C-terminal domain AP9108_RS24130 PF00580 UvrD/REP helicase N-terminal domain AP9108_RS24130 PF12705 PD-(D/E)XK nuclease superfamily AP9108_RS24140 PF01170 Putative RNA methylase family UPF0020 AP9108_RS24140 PF02926 THUMP domain AP9108_RS24145 PF12697 Alpha/beta hydrolase family AP9108_RS24155 PF00271 Helicase conserved C-terminal domain AP9108_RS24155 PF00176 SNF2 family N-terminal domain AP9108_RS24190 PF00850 Histone deacetylase domain AP9108_RS24205 PF04107 Glutamate-cysteine ligase family 2(GCS2) AP9108_RS24210 PF00588 SpoU rRNA Methylase family AP9108_RS24215 PF01476 LysM domain AP9108_RS24215 PF01551 Peptidase family M23 AP9108_RS24385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS24385 PF01348 Type II intron maturase AP9108_RS24390 PF00578 AhpC/TSA family AP9108_RS24390 PF10417 C-terminal domain of 1-Cys peroxiredoxin AP9108_RS24410 PF01348 Type II intron maturase AP9108_RS24410 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS24415 PF00561 alpha/beta hydrolase fold AP9108_RS24415 PF08386 TAP-like protein AP9108_RS24420 PF00707 Translation initiation factor IF-3, C-terminal domain AP9108_RS24420 PF05198 Translation initiation factor IF-3, N-terminal domain AP9108_RS24435 PF16658 Class II release factor RF3, C-terminal domain AP9108_RS24435 PF00009 Elongation factor Tu GTP binding domain AP9108_RS24440 PF00005 ABC transporter AP9108_RS24440 PF17912 MalK OB fold domain AP9108_RS24455 PF00521 DNA gyrase/topoisomerase IV, subunit A AP9108_RS24455 PF03989 DNA gyrase C-terminal domain, beta-propeller AP9108_RS24460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS24460 PF01627 Hpt domain AP9108_RS24460 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS24460 PF00072 Response regulator receiver domain AP9108_RS24460 PF00672 HAMP domain AP9108_RS24460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS24470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS24485 PF00117 Glutamine amidotransferase class-I AP9108_RS24485 PF06418 CTP synthase N-terminus AP9108_RS24490 PF01266 FAD dependent oxidoreductase AP9108_RS24510 PF12697 Alpha/beta hydrolase family AP9108_RS24515 PF14338 Mrr N-terminal domain AP9108_RS24515 PF04471 Restriction endonuclease AP9108_RS24520 PF01555 DNA methylase AP9108_RS24525 PF12706 Beta-lactamase superfamily domain AP9108_RS24550 PF00557 Metallopeptidase family M24 AP9108_RS24555 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS24555 PF01348 Type II intron maturase AP9108_RS24675 PF08447 PAS fold AP9108_RS24675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS24675 PF08448 PAS fold AP9108_RS24775 PF07536 HWE histidine kinase AP9108_RS24775 PF13426 PAS domain AP9108_RS24775 PF08447 PAS fold AP9108_RS24855 PF02427 Photosystem I reaction centre subunit IV / PsaE AP9108_RS24860 PF06827 Zinc finger found in FPG and IleRS AP9108_RS24860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AP9108_RS24860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AP9108_RS24865 PF11910 Cyanobacterial and plant NDH-1 subunit O AP9108_RS24870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AP9108_RS24870 PF00056 lactate/malate dehydrogenase, NAD binding domain AP9108_RS24885 PF00069 Protein kinase domain AP9108_RS24885 PF00805 Pentapeptide repeats (8 copies) AP9108_RS24965 PF04055 Radical SAM superfamily AP9108_RS24975 PF01430 Hsp33 protein AP9108_RS24990 PF00005 ABC transporter AP9108_RS24990 PF12704 MacB-like periplasmic core domain AP9108_RS24990 PF02687 FtsX-like permease family AP9108_RS25010 PF01850 PIN domain AP9108_RS25020 PF12795 Mechanosensitive ion channel porin domain AP9108_RS25020 PF00924 Mechanosensitive ion channel AP9108_RS25020 PF12794 Mechanosensitive ion channel inner membrane domain 1 AP9108_RS25025 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS25030 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS25045 PF00005 ABC transporter AP9108_RS25045 PF03459 TOBE domain AP9108_RS25055 PF13545 Crp-like helix-turn-helix domain AP9108_RS25060 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS25065 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS25075 PF00266 Aminotransferase class-V AP9108_RS25080 PF00753 Metallo-beta-lactamase superfamily AP9108_RS25085 PF00583 Acetyltransferase (GNAT) family AP9108_RS25085 PF13607 Succinyl-CoA ligase like flavodoxin domain AP9108_RS25085 PF13380 CoA binding domain AP9108_RS25090 PF00762 Ferrochelatase AP9108_RS25095 PF01384 Phosphate transporter family AP9108_RS25100 PF00963 Cohesin domain AP9108_RS25100 PF00395 S-layer homology domain AP9108_RS25105 PF08241 Methyltransferase domain AP9108_RS25115 PF00343 Carbohydrate phosphorylase AP9108_RS25125 PF00149 Calcineurin-like phosphoesterase AP9108_RS25145 PF01734 Patatin-like phospholipase AP9108_RS25235 PF00069 Protein kinase domain AP9108_RS25245 PF00069 Protein kinase domain AP9108_RS25260 PF00563 EAL domain AP9108_RS25260 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS25260 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS25265 PF00005 ABC transporter AP9108_RS25270 PF02361 Cobalt transport protein AP9108_RS25275 PF02553 Cobalt transport protein component CbiN AP9108_RS25285 PF00535 Glycosyl transferase family 2 AP9108_RS25290 PF00764 Arginosuccinate synthase AP9108_RS25300 PF01488 Shikimate / quinate 5-dehydrogenase AP9108_RS25305 PF11266 Long-chain fatty aldehyde decarbonylase AP9108_RS25310 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS25320 PF13439 Glycosyltransferase Family 4 AP9108_RS25320 PF00534 Glycosyl transferases group 1 AP9108_RS25325 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS25330 PF00465 Iron-containing alcohol dehydrogenase AP9108_RS25330 PF00171 Aldehyde dehydrogenase family AP9108_RS25335 PF00361 Proton-conducting membrane transporter AP9108_RS25340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AP9108_RS25345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP9108_RS25345 PF00361 Proton-conducting membrane transporter AP9108_RS25375 PF03109 ABC1 family AP9108_RS25400 PF00982 Glycosyltransferase family 20 AP9108_RS25405 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AP9108_RS25405 PF01266 FAD dependent oxidoreductase AP9108_RS25410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AP9108_RS25410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AP9108_RS25415 PF08448 PAS fold AP9108_RS25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS25415 PF08447 PAS fold AP9108_RS25420 PF00672 HAMP domain AP9108_RS25420 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS25420 PF01627 Hpt domain AP9108_RS25420 PF00072 Response regulator receiver domain AP9108_RS25420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AP9108_RS25420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS25430 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS25430 PF00072 Response regulator receiver domain AP9108_RS25445 PF00672 HAMP domain AP9108_RS25445 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS25465 PF18030 RimK PreATP-grasp domain AP9108_RS25465 PF08443 RimK-like ATP-grasp domain AP9108_RS25490 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS25500 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS25510 PF00224 Pyruvate kinase, barrel domain AP9108_RS25510 PF02887 Pyruvate kinase, alpha/beta domain AP9108_RS25515 PF14528 LAGLIDADG-like domain AP9108_RS25515 PF00772 DnaB-like helicase N terminal domain AP9108_RS25515 PF03796 DnaB-like helicase C terminal domain AP9108_RS25520 PF01281 Ribosomal protein L9, N-terminal domain AP9108_RS25520 PF03948 Ribosomal protein L9, C-terminal domain AP9108_RS25525 PF00005 ABC transporter AP9108_RS25540 PF13732 Domain of unknown function (DUF4162) AP9108_RS25540 PF00005 ABC transporter AP9108_RS25545 PF01467 Cytidylyltransferase-like AP9108_RS25560 PF00032 Cytochrome b(C-terminal)/b6/petD AP9108_RS25565 PF00033 Cytochrome b/b6/petB AP9108_RS25585 PF08240 Alcohol dehydrogenase GroES-like domain AP9108_RS25585 PF00107 Zinc-binding dehydrogenase AP9108_RS25590 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS25595 PF00860 Permease family AP9108_RS25605 PF01594 AI-2E family transporter AP9108_RS25610 PF00892 EamA-like transporter family AP9108_RS25615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP9108_RS25615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP9108_RS25615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP9108_RS25615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP9108_RS25620 PF01227 GTP cyclohydrolase I AP9108_RS25625 PF00106 short chain dehydrogenase AP9108_RS25630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AP9108_RS25635 PF01475 Ferric uptake regulator family AP9108_RS25640 PF08534 Redoxin AP9108_RS25645 PF00069 Protein kinase domain AP9108_RS25645 PF00805 Pentapeptide repeats (8 copies) AP9108_RS25675 PF03109 ABC1 family AP9108_RS25685 PF03702 Anhydro-N-acetylmuramic acid kinase AP9108_RS25695 PF00271 Helicase conserved C-terminal domain AP9108_RS25695 PF00270 DEAD/DEAH box helicase AP9108_RS25695 PF03880 DbpA RNA binding domain AP9108_RS25710 PF00365 Phosphofructokinase AP9108_RS25715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AP9108_RS25720 PF07486 Cell Wall Hydrolase AP9108_RS25720 PF01471 Putative peptidoglycan binding domain AP9108_RS25725 PF02843 Phosphoribosylglycinamide synthetase, C domain AP9108_RS25725 PF02844 Phosphoribosylglycinamide synthetase, N domain AP9108_RS25725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AP9108_RS25730 PF00989 PAS fold AP9108_RS25730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS25730 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS25730 PF00672 HAMP domain AP9108_RS25740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AP9108_RS25740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AP9108_RS25740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AP9108_RS25740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AP9108_RS25755 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) AP9108_RS25770 PF12697 Alpha/beta hydrolase family AP9108_RS25775 PF00805 Pentapeptide repeats (8 copies) AP9108_RS25775 PF00069 Protein kinase domain AP9108_RS25805 PF13460 NAD(P)H-binding AP9108_RS25865 PF00664 ABC transporter transmembrane region AP9108_RS25865 PF00005 ABC transporter AP9108_RS25875 PF00534 Glycosyl transferases group 1 AP9108_RS25890 PF00085 Thioredoxin AP9108_RS25900 PF00118 TCP-1/cpn60 chaperonin family AP9108_RS25905 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS25905 PF00072 Response regulator receiver domain AP9108_RS25910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS25910 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS25910 PF00672 HAMP domain AP9108_RS25910 PF13426 PAS domain AP9108_RS25915 PF07568 Histidine kinase AP9108_RS25915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS25915 PF12282 Signal transduction histidine kinase AP9108_RS25930 PF00035 Double-stranded RNA binding motif AP9108_RS25930 PF14622 Ribonuclease-III-like AP9108_RS25935 PF00092 von Willebrand factor type A domain AP9108_RS25955 PF01590 GAF domain AP9108_RS25955 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS25955 PF00360 Phytochrome region AP9108_RS25955 PF00563 EAL domain AP9108_RS25980 PF13426 PAS domain AP9108_RS25980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AP9108_RS25980 PF08447 PAS fold AP9108_RS25985 PF00348 Polyprenyl synthetase AP9108_RS25990 PF04055 Radical SAM superfamily AP9108_RS25995 PF01253 Translation initiation factor SUI1 AP9108_RS26030 PF02578 Multi-copper polyphenol oxidoreductase laccase AP9108_RS26035 PF08279 HTH domain AP9108_RS26035 PF03099 Biotin/lipoate A/B protein ligase family AP9108_RS26035 PF02237 Biotin protein ligase C terminal domain AP9108_RS26040 PF04225 Opacity-associated protein A LysM-like domain AP9108_RS26040 PF01551 Peptidase family M23 AP9108_RS26050 PF01451 Low molecular weight phosphotyrosine protein phosphatase AP9108_RS26055 PF00072 Response regulator receiver domain AP9108_RS26100 PF01928 CYTH domain AP9108_RS26105 PF09150 Orange carotenoid protein, N-terminal AP9108_RS26105 PF02136 Nuclear transport factor 2 (NTF2) domain AP9108_RS26110 PF18032 Photoprotection regulator fluorescence recovery protein AP9108_RS26115 PF00294 pfkB family carbohydrate kinase AP9108_RS26120 PF00072 Response regulator receiver domain AP9108_RS26120 PF00196 Bacterial regulatory proteins, luxR family AP9108_RS26130 PF03129 Anticodon binding domain AP9108_RS26130 PF13393 Histidyl-tRNA synthetase AP9108_RS26140 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AP9108_RS26140 PF00400 WD domain, G-beta repeat AP9108_RS26140 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AP9108_RS26140 PF00400 WD domain, G-beta repeat AP9108_RS26155 PF12327 FtsZ family, C-terminal domain AP9108_RS26155 PF00091 Tubulin/FtsZ family, GTPase domain AP9108_RS26165 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AP9108_RS26165 PF00400 WD domain, G-beta repeat AP9108_RS26175 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS26175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS26200 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AP9108_RS26200 PF03484 tRNA synthetase B5 domain AP9108_RS26200 PF01588 Putative tRNA binding domain AP9108_RS26200 PF03483 B3/4 domain AP9108_RS26200 PF03147 Ferredoxin-fold anticodon binding domain AP9108_RS26235 PF01975 Survival protein SurE AP9108_RS26260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS26260 PF01348 Type II intron maturase AP9108_RS26300 PF01348 Type II intron maturase AP9108_RS26300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS26305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AP9108_RS26305 PF01409 tRNA synthetases class II core domain (F) AP9108_RS26330 PF02504 Fatty acid synthesis protein AP9108_RS26340 PF00698 Acyl transferase domain AP9108_RS26345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS26345 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS26345 PF13426 PAS domain AP9108_RS26345 PF00672 HAMP domain AP9108_RS26455 PF02261 Aspartate decarboxylase AP9108_RS26460 PF12323 Helix-turn-helix domain AP9108_RS26460 PF01385 Probable transposase AP9108_RS26460 PF07282 Putative transposase DNA-binding domain AP9108_RS26525 PF13545 Crp-like helix-turn-helix domain AP9108_RS26525 PF00027 Cyclic nucleotide-binding domain AP9108_RS26545 PF01348 Type II intron maturase AP9108_RS26545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS26590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AP9108_RS26590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AP9108_RS26590 PF03129 Anticodon binding domain AP9108_RS26605 PF10792 Protein of unknown function (DUF2605) AP9108_RS26865 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS26865 PF01348 Type II intron maturase AP9108_RS26935 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS26935 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS26935 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS26935 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS26935 PF17871 AAA lid domain AP9108_RS26950 PF07724 AAA domain (Cdc48 subfamily) AP9108_RS26950 PF02861 Clp amino terminal domain, pathogenicity island component AP9108_RS26950 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS26950 PF17871 AAA lid domain AP9108_RS26950 PF10431 C-terminal, D2-small domain, of ClpB protein AP9108_RS26965 PF00881 Nitroreductase family AP9108_RS27060 PF00082 Subtilase family AP9108_RS27110 PF00753 Metallo-beta-lactamase superfamily AP9108_RS27110 PF01613 Flavin reductase like domain AP9108_RS27130 PF04101 Glycosyltransferase family 28 C-terminal domain AP9108_RS27130 PF03033 Glycosyltransferase family 28 N-terminal domain AP9108_RS27150 PF00069 Protein kinase domain AP9108_RS27150 PF13191 AAA ATPase domain AP9108_RS27155 PF00117 Glutamine amidotransferase class-I AP9108_RS27165 PF03819 MazG nucleotide pyrophosphohydrolase domain AP9108_RS27210 PF13419 Haloacid dehalogenase-like hydrolase AP9108_RS27230 PF07885 Ion channel AP9108_RS27230 PF02254 TrkA-N domain AP9108_RS27245 PF00361 Proton-conducting membrane transporter AP9108_RS27250 PF00361 Proton-conducting membrane transporter AP9108_RS27250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AP9108_RS27250 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AP9108_RS27255 PF00361 Proton-conducting membrane transporter AP9108_RS27260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AP9108_RS27260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AP9108_RS27260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AP9108_RS27265 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS27285 PF01699 Sodium/calcium exchanger protein AP9108_RS27290 PF00750 tRNA synthetases class I (R) AP9108_RS27290 PF05746 DALR anticodon binding domain AP9108_RS27290 PF03485 Arginyl tRNA synthetase N terminal domain AP9108_RS27310 PF09308 LuxQ, periplasmic AP9108_RS27310 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS27310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS27310 PF00072 Response regulator receiver domain AP9108_RS27315 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS27315 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS27315 PF00563 EAL domain AP9108_RS27320 PF02580 D-Tyr-tRNA(Tyr) deacylase AP9108_RS27325 PF02492 CobW/HypB/UreG, nucleotide-binding domain AP9108_RS27325 PF07683 Cobalamin synthesis protein cobW C-terminal domain AP9108_RS27330 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS27330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AP9108_RS27360 PF00862 Sucrose synthase AP9108_RS27360 PF00534 Glycosyl transferases group 1 AP9108_RS27375 PF00152 tRNA synthetases class II (D, K and N) AP9108_RS27375 PF01336 OB-fold nucleic acid binding domain AP9108_RS27435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AP9108_RS27435 PF03466 LysR substrate binding domain AP9108_RS27700 PF18643 BsaWI restriction endonuclease type 2 AP9108_RS27705 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS27720 PF00069 Protein kinase domain AP9108_RS27720 PF00805 Pentapeptide repeats (8 copies) AP9108_RS27765 PF01235 Sodium:alanine symporter family AP9108_RS27780 PF00400 WD domain, G-beta repeat AP9108_RS27780 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AP9108_RS27785 PF04055 Radical SAM superfamily AP9108_RS27800 PF17866 AAA lid domain AP9108_RS27800 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS27820 PF05419 GUN4-like AP9108_RS27820 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS27830 PF05419 GUN4-like AP9108_RS27830 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS27885 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS27885 PF05419 GUN4-like AP9108_RS27890 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS27890 PF05419 GUN4-like AP9108_RS27910 PF17820 PDZ domain AP9108_RS27910 PF13180 PDZ domain AP9108_RS27925 PF07444 Ycf66 protein N-terminus AP9108_RS27930 PF00510 Cytochrome c oxidase subunit III AP9108_RS27935 PF00115 Cytochrome C and Quinol oxidase polypeptide I AP9108_RS27940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AP9108_RS27940 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AP9108_RS27950 PF01040 UbiA prenyltransferase family AP9108_RS27960 PF00563 EAL domain AP9108_RS27960 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS27960 PF01590 GAF domain AP9108_RS27960 PF00360 Phytochrome region AP9108_RS27965 PF00360 Phytochrome region AP9108_RS27965 PF08446 PAS fold AP9108_RS27965 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS27965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS27965 PF01590 GAF domain AP9108_RS27970 PF01627 Hpt domain AP9108_RS27970 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS27970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS27970 PF00072 Response regulator receiver domain AP9108_RS27975 PF00563 EAL domain AP9108_RS27975 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS27975 PF00360 Phytochrome region AP9108_RS27975 PF01590 GAF domain AP9108_RS27980 PF00400 WD domain, G-beta repeat AP9108_RS27990 PF00395 S-layer homology domain AP9108_RS27990 PF04966 Carbohydrate-selective porin, OprB family AP9108_RS27995 PF08865 Domain of unknown function (DUF1830) AP9108_RS28035 PF06596 Photosystem II reaction centre X protein (PsbX) AP9108_RS28045 PF02785 Biotin carboxylase C-terminal domain AP9108_RS28045 PF00289 Biotin carboxylase, N-terminal domain AP9108_RS28045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AP9108_RS28070 PF01348 Type II intron maturase AP9108_RS28070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS28190 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS28190 PF12911 N-terminal TM domain of oligopeptide transport permease C AP9108_RS28205 PF00963 Cohesin domain AP9108_RS28205 PF00395 S-layer homology domain AP9108_RS28230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS28230 PF01348 Type II intron maturase AP9108_RS28290 PF07730 Histidine kinase AP9108_RS28295 PF00072 Response regulator receiver domain AP9108_RS28295 PF00196 Bacterial regulatory proteins, luxR family AP9108_RS28335 PF12705 PD-(D/E)XK nuclease superfamily AP9108_RS28335 PF00580 UvrD/REP helicase N-terminal domain AP9108_RS28335 PF13361 UvrD-like helicase C-terminal domain AP9108_RS28345 PF00069 Protein kinase domain AP9108_RS28350 PF00294 pfkB family carbohydrate kinase AP9108_RS28365 PF00403 Heavy-metal-associated domain AP9108_RS28370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AP9108_RS28370 PF00117 Glutamine amidotransferase class-I AP9108_RS28375 PF01740 STAS domain AP9108_RS28380 PF00588 SpoU rRNA Methylase family AP9108_RS28380 PF08032 RNA 2'-O ribose methyltransferase substrate binding AP9108_RS28420 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS28440 PF00809 Pterin binding enzyme AP9108_RS28445 PF00121 Triosephosphate isomerase AP9108_RS28455 PF12697 Alpha/beta hydrolase family AP9108_RS28465 PF12706 Beta-lactamase superfamily domain AP9108_RS28475 PF02581 Thiamine monophosphate synthase AP9108_RS28475 PF17792 ThiD2 family AP9108_RS28480 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS28495 PF01628 HrcA protein C terminal domain AP9108_RS28500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AP9108_RS28505 PF16363 GDP-mannose 4,6 dehydratase AP9108_RS28515 PF09587 Bacterial capsule synthesis protein PGA_cap AP9108_RS28545 PF00005 ABC transporter AP9108_RS28550 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS28550 PF08245 Mur ligase middle domain AP9108_RS28550 PF01225 Mur ligase family, catalytic domain AP9108_RS28565 PF09285 Elongation factor P, C-terminal AP9108_RS28565 PF08207 Elongation factor P (EF-P) KOW-like domain AP9108_RS28565 PF01132 Elongation factor P (EF-P) OB domain AP9108_RS28570 PF00364 Biotin-requiring enzyme AP9108_RS28585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AP9108_RS28595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP9108_RS28595 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS28595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS28600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AP9108_RS28600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AP9108_RS28610 PF13085 2Fe-2S iron-sulfur cluster binding domain AP9108_RS28615 PF07282 Putative transposase DNA-binding domain AP9108_RS28615 PF01385 Probable transposase AP9108_RS28615 PF12323 Helix-turn-helix domain AP9108_RS28625 PF01242 6-pyruvoyl tetrahydropterin synthase AP9108_RS28645 PF00498 FHA domain AP9108_RS28645 PF01061 ABC-2 type transporter AP9108_RS28645 PF00005 ABC transporter AP9108_RS28670 PF12169 DNA polymerase III subunits gamma and tau domain III AP9108_RS28675 PF02223 Thymidylate kinase AP9108_RS28685 PF00124 Photosynthetic reaction centre protein AP9108_RS28720 PF00453 Ribosomal protein L20 AP9108_RS28725 PF01632 Ribosomal protein L35 AP9108_RS28730 PF14489 QueF-like protein AP9108_RS28740 PF02675 S-adenosylmethionine decarboxylase AP9108_RS28755 PF02638 Glycosyl hydrolase-like 10 AP9108_RS28760 PF00535 Glycosyl transferase family 2 AP9108_RS28785 PF12704 MacB-like periplasmic core domain AP9108_RS28785 PF00005 ABC transporter AP9108_RS28785 PF02687 FtsX-like permease family AP9108_RS28800 PF00440 Bacterial regulatory proteins, tetR family AP9108_RS28800 PF18665 Tetracyclin repressor-like, C-terminal domain AP9108_RS28810 PF07650 KH domain AP9108_RS28810 PF01926 50S ribosome-binding GTPase AP9108_RS28815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AP9108_RS28820 PF02687 FtsX-like permease family AP9108_RS28820 PF00005 ABC transporter AP9108_RS28820 PF12704 MacB-like periplasmic core domain AP9108_RS28825 PF08486 Stage II sporulation protein AP9108_RS28830 PF16921 Tex protein YqgF-like domain AP9108_RS28830 PF09371 Tex-like protein N-terminal domain AP9108_RS28830 PF00575 S1 RNA binding domain AP9108_RS28830 PF17674 HHH domain AP9108_RS28850 PF00561 alpha/beta hydrolase fold AP9108_RS28860 PF09423 PhoD-like phosphatase AP9108_RS28860 PF16655 PhoD-like phosphatase, N-terminal domain AP9108_RS28870 PF12697 Alpha/beta hydrolase family AP9108_RS28875 PF09334 tRNA synthetases class I (M) AP9108_RS28875 PF00133 tRNA synthetases class I (I, L, M and V) AP9108_RS28875 PF08264 Anticodon-binding domain of tRNA AP9108_RS28890 PF00485 Phosphoribulokinase / Uridine kinase family AP9108_RS28915 PF00163 Ribosomal protein S4/S9 N-terminal domain AP9108_RS28915 PF01479 S4 domain AP9108_RS28925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AP9108_RS28930 PF00483 Nucleotidyl transferase AP9108_RS28935 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS28940 PF08421 Putative zinc binding domain AP9108_RS28940 PF08484 C-methyltransferase C-terminal domain AP9108_RS28950 PF08041 PetM family of cytochrome b6f complex subunit 7 AP9108_RS28955 PF13460 NAD(P)H-binding AP9108_RS28960 PF01513 ATP-NAD kinase AP9108_RS28965 PF00072 Response regulator receiver domain AP9108_RS28965 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS28980 PF04015 Domain of unknown function (DUF362) AP9108_RS28985 PF08241 Methyltransferase domain AP9108_RS29020 PF00889 Elongation factor TS AP9108_RS29025 PF00318 Ribosomal protein S2 AP9108_RS29030 PF08078 PsaX family AP9108_RS29205 PF01348 Type II intron maturase AP9108_RS29205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS29225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS29225 PF01348 Type II intron maturase AP9108_RS29245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS29245 PF01348 Type II intron maturase AP9108_RS29310 PF08245 Mur ligase middle domain AP9108_RS29310 PF02875 Mur ligase family, glutamate ligase domain AP9108_RS29320 PF01716 Manganese-stabilising protein / photosystem II polypeptide AP9108_RS29325 PF00696 Amino acid kinase family AP9108_RS29335 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS29345 PF00570 HRDC domain AP9108_RS29345 PF01612 3'-5' exonuclease AP9108_RS29370 PF01192 RNA polymerase Rpb6 AP9108_RS29380 PF01042 Endoribonuclease L-PSP AP9108_RS29385 PF05922 Peptidase inhibitor I9 AP9108_RS29385 PF00082 Subtilase family AP9108_RS29395 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS29400 PF04012 PspA/IM30 family AP9108_RS29420 PF00378 Enoyl-CoA hydratase/isomerase AP9108_RS29425 PF02769 AIR synthase related protein, C-terminal domain AP9108_RS29425 PF00586 AIR synthase related protein, N-terminal domain AP9108_RS29430 PF03330 Lytic transglycolase AP9108_RS29435 PF02224 Cytidylate kinase AP9108_RS29435 PF02569 Pantoate-beta-alanine ligase AP9108_RS29440 PF01522 Polysaccharide deacetylase AP9108_RS29445 PF02391 MoaE protein AP9108_RS29450 PF04542 Sigma-70 region 2 AP9108_RS29450 PF08281 Sigma-70, region 4 AP9108_RS29475 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus AP9108_RS29480 PF04024 PspC domain AP9108_RS29490 PF01522 Polysaccharide deacetylase AP9108_RS29560 PF01330 RuvA N terminal domain AP9108_RS29560 PF07499 RuvA, C-terminal domain AP9108_RS29590 PF02481 DNA recombination-mediator protein A AP9108_RS29590 PF17782 DprA winged helix domain AP9108_RS29600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AP9108_RS29615 PF02673 Bacitracin resistance protein BacA AP9108_RS29625 PF01520 N-acetylmuramoyl-L-alanine amidase AP9108_RS29630 PF00578 AhpC/TSA family AP9108_RS29635 PF00293 NUDIX domain AP9108_RS29635 PF13344 Haloacid dehalogenase-like hydrolase AP9108_RS29640 PF00561 alpha/beta hydrolase fold AP9108_RS29645 PF03309 Type III pantothenate kinase AP9108_RS29650 PF00805 Pentapeptide repeats (8 copies) AP9108_RS29650 PF00069 Protein kinase domain AP9108_RS29670 PF00999 Sodium/hydrogen exchanger family AP9108_RS29670 PF00582 Universal stress protein family AP9108_RS29705 PF02092 Glycyl-tRNA synthetase beta subunit AP9108_RS29705 PF05746 DALR anticodon binding domain AP9108_RS29725 PF00355 Rieske [2Fe-2S] domain AP9108_RS29740 PF03816 Cell envelope-related transcriptional attenuator domain AP9108_RS29750 PF00834 Ribulose-phosphate 3 epimerase family AP9108_RS29760 PF00072 Response regulator receiver domain AP9108_RS29760 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS29780 PF00528 Binding-protein-dependent transport system inner membrane component AP9108_RS29790 PF00270 DEAD/DEAH box helicase AP9108_RS29790 PF08148 DSHCT (NUC185) domain AP9108_RS29790 PF00271 Helicase conserved C-terminal domain AP9108_RS29795 PF12631 MnmE helical domain AP9108_RS29795 PF10396 GTP-binding protein TrmE N-terminus AP9108_RS29795 PF01926 50S ribosome-binding GTPase AP9108_RS29805 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AP9108_RS29810 PF01795 MraW methylase family AP9108_RS29815 PF02954 Bacterial regulatory protein, Fis family AP9108_RS29815 PF00072 Response regulator receiver domain AP9108_RS29815 PF00158 Sigma-54 interaction domain AP9108_RS29825 PF08331 Domain of unknown function (DUF1730) AP9108_RS29840 PF02702 Osmosensitive K+ channel His kinase sensor domain AP9108_RS29860 PF01348 Type II intron maturase AP9108_RS29860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS29960 PF00069 Protein kinase domain AP9108_RS29970 PF16416 ARM-like repeat domain, GUN4-N terminal AP9108_RS29970 PF05419 GUN4-like AP9108_RS29985 PF02195 ParB-like nuclease domain AP9108_RS30000 PF00069 Protein kinase domain AP9108_RS30005 PF01348 Type II intron maturase AP9108_RS30005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS30040 PF00034 Cytochrome c AP9108_RS30040 PF03150 Di-haem cytochrome c peroxidase AP9108_RS30060 PF00224 Pyruvate kinase, barrel domain AP9108_RS30060 PF00391 PEP-utilising enzyme, mobile domain AP9108_RS30060 PF02887 Pyruvate kinase, alpha/beta domain AP9108_RS30125 PF00561 alpha/beta hydrolase fold AP9108_RS30130 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) AP9108_RS30145 PF17862 AAA+ lid domain AP9108_RS30145 PF06480 FtsH Extracellular AP9108_RS30145 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS30145 PF01434 Peptidase family M41 AP9108_RS30150 PF00128 Alpha amylase, catalytic domain AP9108_RS30150 PF09154 Domain of unknown function (DUF1939) AP9108_RS30160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AP9108_RS30170 PF02653 Branched-chain amino acid transport system / permease component AP9108_RS30180 PF12399 Branched-chain amino acid ATP-binding cassette transporter AP9108_RS30180 PF00005 ABC transporter AP9108_RS30185 PF00005 ABC transporter AP9108_RS30190 PF05690 Thiazole biosynthesis protein ThiG AP9108_RS30190 PF01266 FAD dependent oxidoreductase AP9108_RS30200 PF00106 short chain dehydrogenase AP9108_RS30285 PF01124 MAPEG family AP9108_RS30295 PF00360 Phytochrome region AP9108_RS30295 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS30295 PF01590 GAF domain AP9108_RS30295 PF00563 EAL domain AP9108_RS30300 PF00155 Aminotransferase class I and II AP9108_RS30300 PF00392 Bacterial regulatory proteins, gntR family AP9108_RS30320 PF00288 GHMP kinases N terminal domain AP9108_RS30320 PF08544 GHMP kinases C terminal AP9108_RS30345 PF00069 Protein kinase domain AP9108_RS30345 PF00805 Pentapeptide repeats (8 copies) AP9108_RS30350 PF01348 Type II intron maturase AP9108_RS30350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS30370 PF00342 Phosphoglucose isomerase AP9108_RS30375 PF07085 DRTGG domain AP9108_RS30375 PF01515 Phosphate acetyl/butaryl transferase AP9108_RS30380 PF00989 PAS fold AP9108_RS30380 PF00563 EAL domain AP9108_RS30380 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS30380 PF01590 GAF domain AP9108_RS30385 PF00563 EAL domain AP9108_RS30385 PF00498 FHA domain AP9108_RS30385 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS30395 PF01638 HxlR-like helix-turn-helix AP9108_RS30400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AP9108_RS30400 PF02896 PEP-utilising enzyme, TIM barrel domain AP9108_RS30400 PF00391 PEP-utilising enzyme, mobile domain AP9108_RS30410 PF02941 Ferredoxin thioredoxin reductase variable alpha chain AP9108_RS30420 PF00005 ABC transporter AP9108_RS30420 PF06472 ABC transporter transmembrane region 2 AP9108_RS30425 PF00111 2Fe-2S iron-sulfur cluster binding domain AP9108_RS30450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS30450 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS30450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP9108_RS30470 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS30470 PF01348 Type II intron maturase AP9108_RS30525 PF01121 Dephospho-CoA kinase AP9108_RS30530 PF01126 Heme oxygenase AP9108_RS30535 PF01975 Survival protein SurE AP9108_RS30545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS30545 PF00989 PAS fold AP9108_RS30545 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS30560 PF02463 RecF/RecN/SMC N terminal domain AP9108_RS30565 PF00072 Response regulator receiver domain AP9108_RS30565 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS30575 PF07282 Putative transposase DNA-binding domain AP9108_RS30575 PF01385 Probable transposase AP9108_RS30575 PF12323 Helix-turn-helix domain AP9108_RS30580 PF02779 Transketolase, pyrimidine binding domain AP9108_RS30580 PF00364 Biotin-requiring enzyme AP9108_RS30580 PF02780 Transketolase, C-terminal domain AP9108_RS30585 PF02355 Protein export membrane protein AP9108_RS30585 PF07549 SecD/SecF GG Motif AP9108_RS30590 PF07549 SecD/SecF GG Motif AP9108_RS30590 PF02355 Protein export membrane protein AP9108_RS30605 PF00497 Bacterial extracellular solute-binding proteins, family 3 AP9108_RS30610 PF01924 Hydrogenase formation hypA family AP9108_RS30630 PF02769 AIR synthase related protein, C-terminal domain AP9108_RS30630 PF00586 AIR synthase related protein, N-terminal domain AP9108_RS30645 PF00266 Aminotransferase class-V AP9108_RS30650 PF01555 DNA methylase AP9108_RS30665 PF05139 Erythromycin esterase AP9108_RS30665 PF00156 Phosphoribosyl transferase domain AP9108_RS30670 PF03167 Uracil DNA glycosylase superfamily AP9108_RS30690 PF08501 Shikimate dehydrogenase substrate binding domain AP9108_RS30690 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AP9108_RS30700 PF01556 DnaJ C terminal domain AP9108_RS30700 PF00684 DnaJ central domain AP9108_RS30700 PF00226 DnaJ domain AP9108_RS30710 PF00583 Acetyltransferase (GNAT) family AP9108_RS30720 PF12804 MobA-like NTP transferase domain AP9108_RS30775 PF16124 RecQ zinc-binding AP9108_RS30775 PF00271 Helicase conserved C-terminal domain AP9108_RS30775 PF00270 DEAD/DEAH box helicase AP9108_RS30780 PF00561 alpha/beta hydrolase fold AP9108_RS30785 PF03009 Glycerophosphoryl diester phosphodiesterase family AP9108_RS30820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AP9108_RS30845 PF00474 Sodium:solute symporter family AP9108_RS30860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS30860 PF01348 Type II intron maturase AP9108_RS30995 PF01348 Type II intron maturase AP9108_RS30995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS31025 PF03793 PASTA domain AP9108_RS31025 PF00069 Protein kinase domain AP9108_RS31075 PF01523 Putative modulator of DNA gyrase AP9108_RS31080 PF01523 Putative modulator of DNA gyrase AP9108_RS31085 PF02617 ATP-dependent Clp protease adaptor protein ClpS AP9108_RS31100 PF01894 Uncharacterised protein family UPF0047 AP9108_RS31115 PF13183 4Fe-4S dicluster domain AP9108_RS31115 PF02754 Cysteine-rich domain AP9108_RS31120 PF02913 FAD linked oxidases, C-terminal domain AP9108_RS31120 PF01565 FAD binding domain AP9108_RS31125 PF00990 Diguanylate cyclase, GGDEF domain AP9108_RS31125 PF00563 EAL domain AP9108_RS31125 PF03707 Bacterial signalling protein N terminal repeat AP9108_RS31135 PF01380 SIS domain AP9108_RS31145 PF12838 4Fe-4S dicluster domain AP9108_RS31150 PF02754 Cysteine-rich domain AP9108_RS31155 PF00550 Phosphopantetheine attachment site AP9108_RS31160 PF00109 Beta-ketoacyl synthase, N-terminal domain AP9108_RS31160 PF02801 Beta-ketoacyl synthase, C-terminal domain AP9108_RS31165 PF01177 Asp/Glu/Hydantoin racemase AP9108_RS31170 PF03477 ATP cone domain AP9108_RS31175 PF01405 Photosystem II reaction centre T protein AP9108_RS31180 PF00421 Photosystem II protein AP9108_RS31190 PF13439 Glycosyltransferase Family 4 AP9108_RS31190 PF00534 Glycosyl transferases group 1 AP9108_RS31195 PF01594 AI-2E family transporter AP9108_RS31200 PF00989 PAS fold AP9108_RS31200 PF00512 His Kinase A (phospho-acceptor) domain AP9108_RS31200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AP9108_RS31200 PF13188 PAS domain AP9108_RS31205 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS31205 PF00072 Response regulator receiver domain AP9108_RS31210 PF00211 Adenylate and Guanylate cyclase catalytic domain AP9108_RS31215 PF10726 Protein of function (DUF2518) AP9108_RS31230 PF01040 UbiA prenyltransferase family AP9108_RS31235 PF01370 NAD dependent epimerase/dehydratase family AP9108_RS31255 PF05199 GMC oxidoreductase AP9108_RS31255 PF00732 GMC oxidoreductase AP9108_RS31270 PF13614 AAA domain AP9108_RS31275 PF02233 NAD(P) transhydrogenase beta subunit AP9108_RS31280 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AP9108_RS31295 PF00468 Ribosomal protein L34 AP9108_RS31300 PF00825 Ribonuclease P AP9108_RS31310 PF02096 60Kd inner membrane protein AP9108_RS31325 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS31325 PF17862 AAA+ lid domain AP9108_RS31325 PF01434 Peptidase family M41 AP9108_RS31325 PF06480 FtsH Extracellular AP9108_RS31340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AP9108_RS31365 PF00999 Sodium/hydrogen exchanger family AP9108_RS31365 PF03471 Transporter associated domain AP9108_RS31390 PF00311 Phosphoenolpyruvate carboxylase AP9108_RS31410 PF01050 Mannose-6-phosphate isomerase AP9108_RS31410 PF00483 Nucleotidyl transferase AP9108_RS31420 PF00248 Aldo/keto reductase family AP9108_RS31435 PF02654 Cobalamin-5-phosphate synthase AP9108_RS31445 PF01702 Queuine tRNA-ribosyltransferase AP9108_RS31450 PF02533 Photosystem II 4 kDa reaction centre component AP9108_RS31465 PF00291 Pyridoxal-phosphate dependent enzyme AP9108_RS31470 PF00636 Ribonuclease III domain AP9108_RS31470 PF00035 Double-stranded RNA binding motif AP9108_RS31480 PF00124 Photosynthetic reaction centre protein AP9108_RS31535 PF13186 Iron-sulfur cluster-binding domain AP9108_RS31535 PF04055 Radical SAM superfamily AP9108_RS31550 PF05685 Putative restriction endonuclease AP9108_RS31555 PF00124 Photosynthetic reaction centre protein AP9108_RS31560 PF01571 Aminomethyltransferase folate-binding domain AP9108_RS31560 PF08669 Glycine cleavage T-protein C-terminal barrel domain AP9108_RS31660 PF02638 Glycosyl hydrolase-like 10 AP9108_RS31665 PF03062 MBOAT, membrane-bound O-acyltransferase family AP9108_RS31670 PF00009 Elongation factor Tu GTP binding domain AP9108_RS31670 PF06421 GTP-binding protein LepA C-terminus AP9108_RS31670 PF03144 Elongation factor Tu domain 2 AP9108_RS31670 PF00679 Elongation factor G C-terminus AP9108_RS31680 PF10502 Signal peptidase, peptidase S26 AP9108_RS31700 PF00294 pfkB family carbohydrate kinase AP9108_RS31705 PF14693 Ribosomal protein TL5, C-terminal domain AP9108_RS31705 PF01386 Ribosomal L25p family AP9108_RS31710 PF00709 Adenylosuccinate synthetase AP9108_RS31730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AP9108_RS31730 PF01612 3'-5' exonuclease AP9108_RS31730 PF00476 DNA polymerase family A AP9108_RS31730 PF01367 5'-3' exonuclease, C-terminal SAM fold AP9108_RS31745 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS31745 PF00072 Response regulator receiver domain AP9108_RS31750 PF01740 STAS domain AP9108_RS31760 PF00210 Ferritin-like domain AP9108_RS31765 PF00575 S1 RNA binding domain AP9108_RS31775 PF02773 S-adenosylmethionine synthetase, C-terminal domain AP9108_RS31775 PF02772 S-adenosylmethionine synthetase, central domain AP9108_RS31775 PF00438 S-adenosylmethionine synthetase, N-terminal domain AP9108_RS31780 PF05690 Thiazole biosynthesis protein ThiG AP9108_RS31795 PF00072 Response regulator receiver domain AP9108_RS31795 PF00486 Transcriptional regulatory protein, C terminal AP9108_RS31800 PF01593 Flavin containing amine oxidoreductase AP9108_RS31810 PF00145 C-5 cytosine-specific DNA methylase AP9108_RS31815 PF00488 MutS domain V AP9108_RS31815 PF01713 Smr domain AP9108_RS31845 PF13462 Thioredoxin AP9108_RS31845 PF06965 Na+/H+ antiporter 1 AP9108_RS31915 PF00004 ATPase family associated with various cellular activities (AAA) AP9108_RS31915 PF17758 Proteasomal ATPase OB N-terminal domain AP9108_RS31915 PF16450 Proteasomal ATPase OB C-terminal domain AP9108_RS31925 PF12849 PBP superfamily domain AP9108_RS32030 PF08032 RNA 2'-O ribose methyltransferase substrate binding AP9108_RS32030 PF00588 SpoU rRNA Methylase family AP9108_RS32040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AP9108_RS32040 PF00132 Bacterial transferase hexapeptide (six repeats) AP9108_RS32040 PF14602 Hexapeptide repeat of succinyl-transferase AP9108_RS32050 PF04055 Radical SAM superfamily AP9108_RS32055 PF11780 Protein of unknown function (DUF3318) AP9108_RS32070 PF09367 CpeS-like protein AP9108_RS32080 PF02374 Anion-transporting ATPase AP9108_RS32080 PF17886 HSP20-like domain found in ArsA AP9108_RS32095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AP9108_RS32095 PF01348 Type II intron maturase AP9108_RS32115 PF04085 rod shape-determining protein MreC AP9108_RS32125 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) AP9108_RS32170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AP9108_RS32170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AP9108_RS32190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AP9108_RS32190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AP9108_RS32200 PF00330 Aconitase family (aconitate hydratase) AP9108_RS32205 PF00694 Aconitase C-terminal domain AP9108_RS32210 PF00551 Formyl transferase AP9108_RS32215 PF00733 Asparagine synthase AP9108_RS32215 PF13537 Glutamine amidotransferase domain AP9108_RS32240 PF13419 Haloacid dehalogenase-like hydrolase AP9108_RS32370 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system