LOCUS NC_038558 5371 bp DNA circular VRL 24-AUG-2018 DEFINITION Artibeus planirostris polyomavirus 1 isolate R104, complete genome. ACCESSION NC_038558 VERSION NC_038558.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Artibeus planirostris polyomavirus 1 ORGANISM Artibeus planirostris polyomavirus 1 Viruses; dsDNA viruses, no RNA stage; Polyomaviridae. REFERENCE 1 (bases 1 to 5371) AUTHORS Fagrouch,Z., Sarwari,R., Lavergne,A., Delaval,M., de Thoisy,B., Lacoste,V. and Verschoor,E.J. TITLE Novel polyomaviruses in South American bats and their relationship to other members of the family Polyomaviridae JOURNAL J. Gen. Virol. 93 (PT 12), 2652-2657 (2012) PUBMED 22971823 REFERENCE 2 (bases 1 to 5371) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5371) AUTHORS Fagrouch,Z., Sarwari,R., Delaval,M., Lavergne,A., de Thoisy,B., Lacoste,V. and Verschoor,E.J. TITLE Direct Submission JOURNAL Submitted (20-APR-2012) Virology, Biomedical Primate Research Centre, Lange Kleiweg 161, Rijswijk, ZH 2288GJ, The Netherlands COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to JQ958887. ##Assembly-Data-START## Assembly Method :: DNASTAR SeqMan Pro v. 9.1.1 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5371 /organism="Artibeus planirostris polyomavirus 1" /mol_type="genomic DNA" /isolate="R104" /isolation_source="spleen" /host="Artibeus planirostris" /db_xref="taxon:1606497" /country="French Guiana" /collection_date="01-Jan-2011" gene 440..1129 /gene="VP2" /locus_tag="D1R77_gp1" /db_xref="GeneID:37618655" CDS 440..1129 /gene="VP2" /locus_tag="D1R77_gp1" /codon_start=1 /product="VP2 structural protein" /protein_id="YP_009507662.1" /db_xref="GeneID:37618655" /translation="MGAFLTLILNLGEIAAELSATTGLTLETLLSGEALAALEAEVAS VMTIQGITGIEALTQLGFTAEQFANMSLVASLVQEGVSYGLVFQTLSGVSALVGAGIK YGQEQVSTVNRNRRAFFHGQHDILSQALLSFRLDPLNWGDSIITALANEPIKANDGLK NLILNSRWVIASESSSDSASGNLVNFYPPTGGTNQQSTPDWMLPLILGLSGDRTPELS YLQNAIKKKTH" gene 1104..2498 /gene="VP1" /locus_tag="D1R77_gp2" /db_xref="GeneID:37618652" CDS 1104..2498 /gene="VP1" /locus_tag="D1R77_gp2" /codon_start=1 /product="VP1 structural protein" /protein_id="YP_009507663.1" /db_xref="GeneID:37618652" /translation="MPSKRKHTRASAASASACKAAAPKKVCVKRTPACCPAVACVPKL IVKGGVEVLSVVTGDDAVTEIELYLNPRMGVNTPDIETYSNWYTFSYDVYPKVTVIPE NMPTYSVARVSLPILNEDITCDTLQMWEAVSVKTEIVGSGTIIAMAHGKALQPTHENG AGMSIAGPHFHMFAVGGEPLDLQGMVFDWNERYPQGEGKPISIETATGRKMTPKNQGL DPTAKAKLNKDGYYPVELWSPDPAKNENSRYFGSMTTGDNTPSTLQFTNTLTTVLLDE NGVGPLCKGDGLFVSCCDVVGLITKEISQKQAWHGLPRYFNVKLRKRWVKNPYPVTNL LNSLFNNLMPTVTGQPMEGKDSQVEEVRIYQGMEPVPGDPDVIRYIDKYGQRKTELPT NDKPAAPAALPRMYPLSEDFLGHVFPGGDKVGFSRMFKAGTSVPQPPPPSPASPSSSP PRSPPNPMETDKYL" gene complement(2542..5371) /locus_tag="D1R77_gp3" /db_xref="GeneID:37618653" CDS complement(join(2542..4722,5147..5371)) /locus_tag="D1R77_gp3" /codon_start=1 /product="large T-antigen" /protein_id="YP_009507664.1" /db_xref="GeneID:37618653" /translation="MDHALSSEERKELCNLLGIARHCYGNYPLMKSNFKHACLKYHPD KGGDQEKMARLNFLWQKFLSYFMEMRRNIPEEDEEPIYGTTAFRHWWYRQHSRSHGRT QASTSGTSSRSSGYGSQPSQSSSTGSQDGFQQRQQHGESGDPDHSFDSEQQHNQHQST DSEQQHQQQNSKKQKQQSKKSHHSSSSSSSRSDIPSSHGSHGFSGGNIYGNSSRVPPW DDDSLLCEESLSSSPSPEPAPTSTEEEPSFSESSSFRGPPGTPSQSTDDDFSMPRSPP KRRRAPSPPSSYSSTPPRPKKNKPTSVPTDFPDDLLDCLSHAVYSNKTMSAFAIFTTQ EKGKFFYEKLSEKFKVEYKGRFGCKEGCILVIVTLTKHRVSAVKNFALPFCTVSFLLI KGINKLMEMYDLLQSEPYRLIEENKSLSAHEFTEKKEITCNWNLVADFAHEHGIDDPL LILAHYLDFAKPYPCNKCSSKSALKPHKSHEQHHKNAKLFIESKSQKSICLQAAETVQ AKRRLLMLELTREEMLCEKFKSILEKLKDLDPPDLKIYMAGVAWYYCLFDNFPQKVLK ILKLLTENIPKKRNVLFKGPINSGKTSLAAAFLDLLDGKALNVNCPADKLPFELGCAL DKFCVCFEDVKGQLGANKDLQPGQGFHNLDNLRDHLDGAVPVSLEKKHINKRHQIFPP CIITANEYAIPVTVAARIAYTLNFSLQPNLKASLDKNHDLRKMRVLQSGTTLLLCLIW HLDIEDFKSTLHDDVQTWKDILRAEVGRGMYYNMVENVEKGENPLFGIVDEEEEEEEP TNE" gene complement(4817..5371) /locus_tag="D1R77_gp4" /db_xref="GeneID:37618654" CDS complement(4817..5371) /locus_tag="D1R77_gp4" /codon_start=1 /product="small t-antigen" /protein_id="YP_009507665.1" /db_xref="GeneID:37618654" /translation="MDHALSSEERKELCNLLGIARHCYGNYPLMKSNFKHACLKYHPD KGGDQEKMARLNFLWQKFLSYFMEMRRNIPEVSAPSFWEDDFPTLKDQIRCGLKLIFL KGPGCLHMCARESKCTCVCCRLHRQHRSLKALKSKNCLVWGECLCLSCFLLWFGFPTT WETIEEWQKIIENTESRFLHLQLY" ORIGIN 1 ggctgcaaag tgacagttag agagcttgca ctctcttata tacctctgct gggcgcgcga 61 aaatcaaaaa agcctcagag gcctctctcc tttatttcag aaagcctcag aggctaggag 121 cctcaggcct cctcctattt gagaaaaaaa aatacccctc tgcacttggt ttcgtctgct 181 gggcagacgg cccggaaacc acaaaggatg ttgctgacat atgtgttgat aattattttc 241 taaatgtttt ttttgtttcc gtcgggcggg ggagctgtga ggagtcacta ggtggcgcgt 301 gtttttttca aatacaaaag gcggggtaag tctaaacttg taccattttt ttaacacaga 361 aagggcggga gcggagccca gaacactaaa ctgaccagta aactgctaaa agtaagtaaa 421 ttttctttgt ttttcagata tgggggcttt tttgacctta atcttgaatc ttggtgagat 481 tgctgctgaa ttatctgcta ctactggact gacacttgaa actttattgt ctggagaagc 541 cttagctgcc cttgaagctg aagtggccag tgttatgacc atacaaggaa ttactgggat 601 tgaggcctta actcaacttg gttttactgc tgaacagttt gccaacatgt ccttagttgc 661 ctctttggtt caagaaggtg tctcatatgg cctagtattc caaaccttat ctggagttag 721 tgctttagtt ggtgctggaa ttaaatatgg tcaagaacaa gtgtcaactg taaacaggaa 781 caggagagct ttctttcatg gacagcatga tattctgagt caggctttgt tatcatttag 841 attagatcct ttaaattggg gtgacagtat cattacagct ttagcaaatg aacctattaa 901 ggctaatgat ggtttaaaaa atctgatatt aaatagtaga tgggttatag cttctgaaag 961 ttcttctgac tcagcatcag gtaatttagt taatttttat cctcctacag gaggcacaaa 1021 tcagcaatct actcctgatt ggatgcttcc tttaatttta ggcctcagtg gagacagaac 1081 acctgagctg agctatttac aaaatgccat caaaaagaaa acacactaga gcatctgctg 1141 catctgccag tgcttgtaaa gctgctgctc ctaagaaagt ttgtgtgaaa agaactccag 1201 cttgttgtcc tgctgtggca tgtgtaccta aactaattgt aaagggaggg gtggaggtat 1261 taagtgttgt gactggggat gatgctgtaa ctgaaataga gttgtattta aatcctagaa 1321 tgggagtaaa cactccagat atagaaactt actcaaattg gtacactttc agttatgatg 1381 tgtatcctaa agtgactgtc attcctgaaa acatgcctac ctacagtgta gctagagttt 1441 ctttgccaat tcttaatgag gatattacct gtgatacttt gcagatgtgg gaggctgtat 1501 ctgtaaaaac agaaatagtt ggatctggaa caatcatagc tatggcccac ggaaaggcct 1561 tgcagccaac tcatgaaaat ggagctggca tgtctattgc aggccctcat tttcatatgt 1621 ttgctgtggg aggtgaacct cttgacctgc agggcatggt ttttgattgg aatgaaaggt 1681 atcctcaggg ggaagggaaa cccatcagta tagaaactgc tacaggcaga aaaatgactc 1741 ctaaaaatca aggcctagat cctactgcta aagctaaatt aaataaagat gggtattatc 1801 ctgtagaatt atggagtcca gaccctgcaa aaaatgaaaa ttctagatat tttggctcta 1861 tgactactgg agataatacc ccatcaactt tacagtttac aaacacttta actactgtgc 1921 tgctggatga aaatggagtg ggacctttgt gcaaaggaga tggcttattt gttagctgct 1981 gtgatgttgt agggttaata actaaagaaa tttctcagaa acaagcttgg catggcttac 2041 ctagatattt taatgtaaaa ttaaggaaaa ggtgggtgaa aaacccttat ccagtgacca 2101 atttgttaaa tagcttattt aataatctta tgcctactgt gactgggcag cccatggagg 2161 ggaaggattc tcaggttgag gaagtgagaa tataccaggg aatggagcca gttcctggag 2221 acccagatgt tattagatat attgataaat atggacaaag aaagacagaa ttacctacaa 2281 atgacaaacc tgcagcccct gctgctctgc ctaggatgta tccattgtca gaggactttt 2341 taggtcatgt ttttcctgga ggagacaaag ttggcttctc aagaatgttt aaggcgggaa 2401 ccagtgtgcc ccaacctccc cctccttccc ctgcttctcc ctccagttct ccacccagat 2461 ctcctcccaa tcccatggaa acagacaaat atttgtgaaa aaaaactttt attgtggcag 2521 aataaatgca tatttataaa cttattcatt tgtgggctct tcttcttctt cttcttcatc 2581 tacaattcca aataagggat tttccccttt ctctacattt tcaaccatat tataatacat 2641 acctctaccc acttcagctc ttaaaatatc tttccaggtt tgtacatcat catgtaaagt 2701 gctcttaaaa tcctctatat ctaaatgcca tattaaacat aataacaatg tagttccact 2761 ctgcaaaact ctcatttttc taagatcatg atttttatcc aagctagctt ttaaattagg 2821 ttgcaaacta aaatttaaag tgtaagcaat tctagcagct actgtaacag gtatagcata 2881 ttcatttgca gtaataatac atggtggaaa tatctgatgc cttttattaa tatgtttttt 2941 ctctaagcta acaggaactg ctccatctaa atgatctctt aaattatcca ggttatgaaa 3001 gccctgacca ggctgcaggt ctttatttgc acctagttga cctttgacat cttcaaagca 3061 aacacagaac ttatctaagg cacaccctaa ttcaaagggt aatttatctg cagggcaatt 3121 aacatttaaa gctttaccat ccaataaatc caaaaaagca gctgctaaac ttgttttccc 3181 agagttaata ggtcctttaa acaatacatt tcttttttta ggaatatttt ctgttagtag 3241 ctttaaaatc tttaaaactt tttgaggaaa gttatcaaat aaacaataat accatgctac 3301 tccagccata taaatcttca aatcaggagg gtccaaatct tttaattttt ccaaaataga 3361 cttaaatttt tcacatagca tttcctctct ggttaattca agcattaata atcttctttt 3421 agcttgaact gtctctgctg cctgtaaaca aatagatttc tgagatttag actcaataaa 3481 cagtttggca tttttatgat gttgctcatg agacttgtgt ggtttgaggg cagacttact 3541 ggaacattta ttacaagggt atggtttagc aaagtctaga tagtgtgcta aaattagtaa 3601 tgggtcatca ataccatgct catgtgcaaa atcagcaact aaattccagt tacaggttat 3661 ttctttcttt tcagtaaatt catgggcaga taaagactta ttttcttcaa ttaatctata 3721 tggttcactc tgtaataaat catacatttc cattaactta ttaataccct taattaataa 3781 gaagctgaca gtacaaaaag gtaatgcaaa atttttaaca gcagaaactc tatgtttagt 3841 taaagttaca ataactaaaa tacagccctc tttacaccca aatctcccct tatattctac 3901 tttaaatttt tctgagagtt tttcataaaa aaatttacct ttttcttggg tggtgaaaat 3961 tgcaaaagca ctcattgttt tattgctgta aacagcatga ctaaggcagt caagcaaatc 4021 atcaggaaaa tcagtaggaa cagaagttgg tttgttcttt tttggtcttg gtggagtgct 4081 tgaatagctt gaaggaggtg aaggtgctct tcttcgctta ggaggacttc ttggcattga 4141 gaagtcgtcg tcagtcgact gcgaaggggt cccggggggt cctcgaaaag aacttgactc 4201 agagaaactg ggttcctcct cggtagaggt gggggctggc tctggagaag gggacgatga 4261 tagggactcc tcgcatagaa gggaatcatc atcccatggt gggactctgg atgaatttcc 4321 atatatattc cctcctgaga acccatgcga gccatgtgag gaaggtatgt ctgatctgga 4381 gctagaggaa gaggatgagt gatgggattt cttggactgc tgcttctgct tcttggagtt 4441 ctgctgctgg tgctgctgtt cactgtcagt agactggtgt tggttatgct gctgttcaga 4501 gtcaaaagag tggtctgggt ctcctgactc tccatgctgc tgccgctgct ggaatccatc 4561 ctggctccca gtggatgatg attggctggg ttgggaacca taacctgagg atctggagct 4621 tgttcctgaa gtggaagcct gggtcctgcc atggcttctg ctgtgctgcc gataccacca 4681 gtgtctaaaa gctgtagtac catatattgg ctcttcatcc tccttaaata gagaaaaaat 4741 gacatttagg aaaccccaaa caccttaaaa tgttaaattc tgcatataaa aggccagttt 4801 tacatactta caagtgttaa taaagctgta ggtggagaaa ccgactctct gtgttttcaa 4861 tgatcttttg ccactcttct atagtttccc aggtagtagg aaacccaaac cacagtagga 4921 agcaagataa gcaaagacac tctccccaca ccaagcaatt tttacttttt aaggccttta 4981 aactcctatg ttgcctatgc aacctacaac aaacacaagt acacttagat tctcttgcac 5041 acatatgcag gcagccagga ccctttagga aaatcagttt taagccacac ctgatctgat 5101 ctttaagagt aggaaaatca tcctcccaaa aagaaggtgc actaacctca ggtatatttc 5161 ttctcatctc catgaaataa gataagaact tttgccataa aaagttcaat cttgccattt 5221 tttcctgatc tcctccttta tcaggatgat attttagaca ggcatgctta aaattgcttt 5281 tcattaaagg ataatttcca tagcaatgcc ttgcaatccc caaaagattg caaagttctt 5341 ttctttcttc tgaagagagt gcatggtcca t //