LOCUS NC_038556 5187 bp DNA circular VRL 24-AUG-2018 DEFINITION Artibeus planirostris polyomavirus 3 isolate A504, complete genome. ACCESSION NC_038556 VERSION NC_038556.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Artibeus planirostris polyomavirus 3 ORGANISM Artibeus planirostris polyomavirus 3 Viruses; dsDNA viruses, no RNA stage; Polyomaviridae. REFERENCE 1 (bases 1 to 5187) AUTHORS Fagrouch,Z., Sarwari,R., Lavergne,A., Delaval,M., de Thoisy,B., Lacoste,V. and Verschoor,E.J. TITLE Novel polyomaviruses in South American bats and their relationship to other members of the family Polyomaviridae JOURNAL J. Gen. Virol. 93 (PT 12), 2652-2657 (2012) PUBMED 22971823 REFERENCE 2 (bases 1 to 5187) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5187) AUTHORS Fagrouch,Z., Sarwari,R., Delaval,M., Lavergne,A., de Thoisy,B., Lacoste,V. and Verschoor,E.J. TITLE Direct Submission JOURNAL Submitted (20-APR-2012) Virology, Biomedical Primate Research Centre, Lange Kleiweg 161, Rijswijk, ZH 2288GJ, The Netherlands COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to JQ958890. ##Assembly-Data-START## Assembly Method :: DNASTAR SeqMan Pro v. 9.1.1 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5187 /organism="Artibeus planirostris polyomavirus 3" /mol_type="genomic DNA" /isolate="A504" /isolation_source="spleen" /host="Artibeus planirostris" /db_xref="taxon:1606499" /country="French Guiana" /collection_date="01-Jan-2011" gene 702..1736 /gene="VP2" /locus_tag="D1R75_gp1" /db_xref="GeneID:37618645" CDS 702..1736 /gene="VP2" /locus_tag="D1R75_gp1" /codon_start=1 /product="VP2 structural protein" /protein_id="YP_009507653.1" /db_xref="GeneID:37618645" /translation="MGAVFAVLADVVELATTTGFSLEAILSGEAVAAVEALQAELSTL ATFEGLSQIEALSSLGISIEQYAALTELATQIPANLAGSLTALAGLQHTAVGVVGIAA AAASLIPGGFAHDIPVANMALVPYMPDYDIFFPGVSTFARFANYLDPLNWAPDLYHQV ARWFWESFLHESRRQIGYAGQEVARYATATVQDSLARFFENARWAVSHFSSNLYTNLH DYYRELPKLKPEQARQLARLLEEKVPDKINLHDLDKRTSAEFVEKVASPGGAHQRHTP DWMLPLILGLYGDLTPTWKAVLEEEEQIHGPSKKKPKTSTPSTRPKTPYQRRNRSSRA KNRTRQHHSD" gene 1062..1736 /gene="VP3" /locus_tag="D1R75_gp2" /db_xref="GeneID:37618641" CDS 1062..1736 /gene="VP3" /locus_tag="D1R75_gp2" /codon_start=1 /product="VP3 structural protein" /protein_id="YP_009507654.1" /db_xref="GeneID:37618641" /translation="MALVPYMPDYDIFFPGVSTFARFANYLDPLNWAPDLYHQVARWF WESFLHESRRQIGYAGQEVARYATATVQDSLARFFENARWAVSHFSSNLYTNLHDYYR ELPKLKPEQARQLARLLEEKVPDKINLHDLDKRTSAEFVEKVASPGGAHQRHTPDWML PLILGLYGDLTPTWKAVLEEEEQIHGPSKKKPKTSTPSTRPKTPYQRRNRSSRAKNRT RQHHSD" gene 1615..2688 /gene="VP1" /locus_tag="D1R75_gp3" /db_xref="GeneID:37618643" CDS 1615..2688 /gene="VP1" /locus_tag="D1R75_gp3" /codon_start=1 /product="VP1 structural protein" /protein_id="YP_009507655.1" /db_xref="GeneID:37618643" /translation="MAPPKRSPKLPPPAPVPKLLIKGGIEVLELRTGPDSITQIELFL NPRMGKGDTTDWLGFSENITVSSTWETDHPEADQTPCYSCARVSLPMLNEDMTCDKIL MWEAVSVKTEVVGISSLVNVHSFKKRVDPEGIGIPIEGMNYHMFAVGGEPLELQFLVE NHHTVYGQGLRVVKTPGVDAQVLNPALKGILDKDGAYPIEAWSPDPSKNENSRYFGSY TGGQSTPPVLQFTNTVTTILLDENGVGPLCKGDGLFLSCADIVGFHTQQLNNKMKYRG LPRYFNVTLRKRVVKNPYPVSSLLNTLFTKLMPKMDGQPMSGDKNQVEEVRVFEGTEG LPGDPDMVRTIDRYGEVETEVPS" gene complement(2734..5187) /locus_tag="D1R75_gp4" /db_xref="GeneID:37618642" CDS complement(join(2734..4593,4939..5187)) /locus_tag="D1R75_gp4" /codon_start=1 /product="large T-antigen" /protein_id="YP_009507656.1" /db_xref="GeneID:37618642" /translation="MDKALNREESQELMQLLGLSMTLYGQLPMMRKAYLNKCKEYHPD KGGDEQKMKRMNELYKKLEDALSAASREETVWTSWASGECPTYGSAEWDAWWREFNAD WEENLRCDEEMPDFDEDNTQSSQHTPPKKKFRRDAPSEFPEVLLEFLSKAVFSNKCVS AFLIYTTKEKSVLLYRKVWDKFSSTFISRHSHGADKALLYVLTPNKHRVSAINNFCKK FCSISFVLVKAIIKPFPCYCALGKEPFELLDESVPGGLTENVFMAEDCEEGQKQVNWK QISDYACAIKCDDVHLLMGLYLEFEFPVESCGKCDKQVLPSHFKYHKDHLENAKLFAQ CKNQKSICQQAVDAVIAKKRVDQLVLTRKQMLTERFVTMLDKMDAHFGPRGAGDLREY MAGVCWLHCPIHNIEEHIVEFLQCIVSNVPKRRYWLFKGPVNSGKTTLAAALLDLVGG KALNINLPFERINFELGVAIDQYMIVFEDVKGTVSTKDLPQGLGLSNLDNLRDYLDGS VKVNLEKKHLNKRTQIFPPGIVTMNEYVLPTTLSIRFVKTLNFRVKNYLSKSLRQTEE LLEKRILQSGMTLMLMLVHHCLVQEFDPSIQARVVEWKERLDREVGDDEMNTFLRRIA QGKYILEDEEEDLMDLDQQRMPPPPPRGPPPPYTPVDPLSTAQSQQSQSDESQGSQPT TPATSQSTAPDSGIFFESPQ" gene complement(4660..5187) /locus_tag="D1R75_gp5" /db_xref="GeneID:37618644" CDS complement(4660..5187) /locus_tag="D1R75_gp5" /codon_start=1 /product="small t-antigen" /protein_id="YP_009507657.1" /db_xref="GeneID:37618644" /translation="MDKALNREESQELMQLLGLSMTLYGQLPMMRKAYLNKCKEYHPD KGGDEQKMKRMNELYKKLEDALSAASREETVWTSWASGEVGSDVSPGPDALYCRDWDV CSKGLAPTYCCCLMCQLRKQHQNRRIMNCSVNIWGRCYCYYCFLNWFGFDKTYTTFLM WCSCIGEMPLRDLHL" ORIGIN 1 ctctcttttt tgctgcagaa aactattaaa aagattctgt tggaacctcc aacttctgtg 61 ccagtagctg caaaatattt gctgcgcgcc ctctacttct gttataaaaa gaaggtaagg 121 ctacaggccc ccggcctctc ttatatttag gaaaaaaaag ttaggtctgg gcttcctgcc 181 agggaggagt tacatgtttg tggttaacat actaaaggtc agtcatgtga gaccatgcta 241 gcaaaaagtg cattgataag agccaagcgc cacctgttta caaaacagaa aacaggtatc 301 agataacatt ccttaatccc ttttcgcgtg tgtccttgtt taaaggtcac ctttaaaggg 361 aaagccatgc caaacctggc ataaataaag tgccaggcag gctgtttttt tctccttgac 421 ctttactgag caaaaaaaca ggaactttgt ggttagctag agcaacggtt ttctcatacc 481 actcatacca tttttccagg cggagcgcca gatggtgcta tccgccaagt tgcggtttta 541 gtttacagga agtgaaagct gcctcacagc tgcctgtcag tcacagccgt gtcctttgac 601 ccccgagact ttgggcctag ttagcagcca gaagccttct caaagtgggg ttccttagct 661 ccaaagtagc ttctaaggta agtttttttg tttttttagg tatgggagct gtctttgcag 721 tcctagctga tgttgttgaa ttagccacaa caactggctt ttctctagaa gctattttat 781 cgggagaggc tgtggctgct gtggaagctt tacaggcaga gcttagtact ctagctacct 841 ttgagggact gtcacagata gaagctctct cttctttagg aatatcaatt gaacagtacg 901 ctgccttgac ggagcttgct acccagatac ctgctaactt agctggatcc ctgacagctt 961 tggcaggtct tcagcacacc gctgttggag tggttggaat tgctgcagca gctgcttctt 1021 tgattcctgg aggctttgca cacgatatac ctgtggctaa tatggctctt gtaccttata 1081 tgcctgacta tgatatattt ttccctggag tttctacatt tgctagattt gctaattact 1141 tagatccttt gaattgggcc ccagaccttt atcatcaggt ggcaagatgg ttttgggaga 1201 gttttcttca tgagagtagg aggcaaatag gttatgctgg tcaagaggta gctaggtatg 1261 ctactgctac agttcaggac agtcttgcca ggttttttga gaatgctagg tgggcagtct 1321 ctcatttttc aagcaatttg tacaccaacc ttcatgatta ttatagagaa ctgcccaaat 1381 taaagccaga gcaggccaga cagctggcta gattacttga ggaaaaggtg cctgataaaa 1441 ttaatctgca tgatctggat aagagaacct ctgctgaatt tgtggagaaa gtggcatctc 1501 ctggaggggc tcatcaaagg cacactcctg attggatgct tcctttaatt ttaggcctgt 1561 acggggacct cacccctacc tggaaagcag tcctagaaga agaagagcaa atccatggcc 1621 cctccaaaaa gaagcccaaa acttccaccc ccagcacccg tcccaaaact ccttatcaaa 1681 ggaggaatag aagttctaga gctaagaaca ggaccagaca gcatcactca gattgagctg 1741 tttctgaatc ccaggatggg caagggagac accactgatt ggcttggatt tagtgaaaat 1801 atcactgttt ctagtacctg ggaaactgac caccctgaag ctgaccaaac cccctgctat 1861 agctgtgcca gagttagcct tcctatgtta aatgaggata tgacctgtga caaaattctg 1921 atgtgggaag ctgtcagtgt taaaactgaa gttgtgggaa taagcagcct tgtaaatgtg 1981 cattctttta aaaaaagagt tgatcctgag ggaattggaa ttcccattga ggggatgaat 2041 taccatatgt ttgctgtggg aggggagccc ctggagttgc agtttctggt ggagaaccac 2101 cacacagtgt atgggcaggg tcttagagta gtcaagaccc ctggtgttga tgctcaggtg 2161 ctaaaccctg ccctaaaagg gattttggat aaggatggtg cttatcccat tgaagcttgg 2221 agcccagacc cctctaagaa tgaaaacagc agatattttg ggtcctacac tggtggacag 2281 agcaccccac ctgtgctgca gttcacaaac actgttacca caatcctttt ggatgagaat 2341 ggagtgggac cactctgcaa gggggatggg ctcttcctga gctgtgctga cattgttggc 2401 ttccataccc aacagctgaa taataaaatg aaatacaggg ggcttcccag atattttaat 2461 gtgaccttga gaaagagagt tgtcaaaaat ccctaccctg tgagcagctt gcttaatacc 2521 ctgtttacaa agcttatgcc taagatggat ggccagccca tgtctgggga taagaaccag 2581 gtggaggagg tcagggtctt tgagggcact gaggggcttc ctggggatcc tgatatggtt 2641 agaactattg acagatatgg agaagtggaa acagaagtgc caagctaaaa aatttgtttt 2701 tattaaaagt tgtgtacaaa agcaaagcaa ggactactgt ggtgattcaa aaaagatgcc 2761 agaatcaggt gctgtacttt ggctggttgc tggggtggtt ggctgggatc cttggctctc 2821 atcactctgg ctctgctggc tctgggcagt tgaaagagga tccactggag tgtagggtgg 2881 aggtggtcct ctaggagggg gaggaggcat cctctgctgg tccaggtcca ttaagtcctc 2941 ttcttcatct tccaggatgt actttccctg ggcaatgcgc ctcaaaaagg tattcatctc 3001 atcatctccc acctctctgt ccagtctctc tttccattca accactctag cctgaatcga 3061 ggggtcaaac tcttgtacaa ggcaatgatg gacaagcata agcatcaagg tcattcctga 3121 ctgtaagatt ctcttttcca gaagctcctc agtttgcctg aggctcttag acaggtagtt 3181 tttaactctg aaatttaggg tttttacaaa cctaatactg agagtggttg ggagcacata 3241 ttcattcatg gtaacaattc caggggggaa aatttgggtt cttttattaa ggtgcttttt 3301 ctcaagattc actttcacac tcccatccaa ataatccctc aaattgtcca aattactcag 3361 ccccagacct tgaggtaagt ccttggtact cactgtaccc ttaacatcct caaaaacaat 3421 catatactgg tcaattgcaa cccccaactc aaaattaatt ctttcaaaag gcaaattaat 3481 atttaaggcc tttcctccca ccaggtccaa gagggcagct gctaaagtag ttttcccact 3541 gtttacaggc cccttaaaca gccaatatct ccttttaggt acatttgaaa caatacattg 3601 caaaaattca acaatatgct cctcaatatt atggataggg caatgcagcc agcagacccc 3661 agccatatat tccctcaggt ctccagcccc tctaggccca aagtgagcat ccattttgtc 3721 taacatagtg acaaatcttt cagttaacat ctgtttccta gttagcacaa gctgatccac 3781 cctttttttc gcaataacag catccacagc ttgctgacag attgatttct gatttttaca 3841 ctgagcaaac agctttgcat tctcaaggtg gtctttatgg tacttaaagt gagagggtaa 3901 cacttgttta tcacattttc cacagctttc cacagggaat tcaaactcta aatacaggcc 3961 catcaataaa tgcacatcat cacattttat agcacaggca tagtcagaaa tctgcttcca 4021 attaacttgt ttttgtccct cctcacaatc ctctgccatg aacacattct cagttaagcc 4081 ccctggaaca ctctcatcca agagctcaaa gggctctttg ccaagggcac aatagcatgg 4141 gaaaggctta atgatagctt tcacaagcac aaagctaata ctgcaaaatt tcttgcaaaa 4201 attatttatg gcacttactc tatgcttatt tggggtaagc acatacagaa gagctttatc 4261 tgcaccatgg ctatgcctgc taataaaagt ggaggaaaat ttatcccaca ctttcctata 4321 aagcagcaca cttttttcct tagtagtata gatcagaaaa gcactcacac acttattgct 4381 aaacacagct ttagataaga actctaagag aacctctggg aattctgaag gagcatctct 4441 tctaaatttc ttcttaggag gtgtatgctg agaagattgg gtgttatcct catcaaaatc 4501 aggcatctcc tcatcacatc tcaggttttc ttcccagtca gcattgaatt ctctccacca 4561 ggcatcccat tcagcactcc catatgttgg gcactaaaaa aaaaatcaca ggctgtttgc 4621 ttgcctccca aacccaattt tccccaaaaa tacttacctc tagaggtgaa gatctcttag 4681 aggcatctct ccaatgcagg agcaccacat aaggaatgtg gtgtaggttt tatcaaatcc 4741 aaaccagttt aaaaagcagt aatagcagta gcatcttccc cagatattta cactgcaatt 4801 cataatcctt ctattctgat gctgctttct aagctggcac ataaggcagc agcagtatgt 4861 tggagcaagc cctttactgc agacatccca atctctgcag taaagggcat ctggcccagg 4921 agagacatca ctacctacct ctccagaggc ccaggaggtc caaacagttt cttctcttga 4981 ggcagcactt aaagcatcct caagcttttt gtataattca ttcatccttt tcattttctg 5041 ctcatcaccc cctttatcag ggtggtattc cttgcatttg ttcagatagg cttttctcat 5101 cataggcaat tgcccataga gagtcattga taagcccaaa agctgcataa gctcctggct 5161 ttcctctcta tttaaagcct tatccat //