AYWB_RS00005 PF00308 Bacterial dnaA protein AYWB_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AYWB_RS00005 PF11638 DnaA N-terminal domain AYWB_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AYWB_RS00010 PF02767 DNA polymerase III beta subunit, central domain AYWB_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AYWB_RS00015 PF01250 Ribosomal protein S6 AYWB_RS00025 PF01084 Ribosomal protein S18 AYWB_RS00030 PF01281 Ribosomal protein L9, N-terminal domain AYWB_RS00030 PF01368 DHH family AYWB_RS00030 PF02272 DHHA1 domain AYWB_RS00030 PF03948 Ribosomal protein L9, C-terminal domain AYWB_RS00035 PF00772 DnaB-like helicase N terminal domain AYWB_RS00035 PF03796 DnaB-like helicase C terminal domain AYWB_RS00040 PF00472 RF-1 domain AYWB_RS00040 PF03462 PCRF domain AYWB_RS00045 PF01300 Telomere recombination AYWB_RS00050 PF06144 DNA polymerase III, delta subunit AYWB_RS00055 PF01926 50S ribosome-binding GTPase AYWB_RS00060 PF00133 tRNA synthetases class I (I, L, M and V) AYWB_RS00060 PF08264 Anticodon-binding domain of tRNA AYWB_RS00060 PF10458 Valyl tRNA synthetase tRNA binding arm AYWB_RS00065 PF07155 ECF-type riboflavin transporter, S component AYWB_RS00070 PF00005 ABC transporter AYWB_RS00070 PF12558 AYWB_RS00070 AYWB_RS00075 PF02361 Cobalt transport protein AYWB_RS00080 PF13365 Trypsin-like peptidase domain AYWB_RS00085 PF00011 Hsp20/alpha crystallin family AYWB_RS00090 PF00122 E1-E2 ATPase AYWB_RS00090 PF00689 Cation transporting ATPase, C-terminus AYWB_RS00090 PF00690 Cation transporter/ATPase, N-terminus AYWB_RS00090 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit AYWB_RS00105 PF12113 AYWB_RS00105 AYWB_RS00120 PF00317 Ribonucleotide reductase, all-alpha domain AYWB_RS00120 PF02867 Ribonucleotide reductase, barrel domain AYWB_RS00120 PF07972 NrdI Flavodoxin like AYWB_RS00120 PF08343 Ribonucleotide reductase N-terminal AYWB_RS00125 PF00268 Ribonucleotide reductase, small chain AYWB_RS00130 PF01741 Large-conductance mechanosensitive channel, MscL AYWB_RS00135 PF00005 ABC transporter AYWB_RS00135 PF00664 ABC transporter transmembrane region AYWB_RS00140 PF00005 ABC transporter AYWB_RS00140 PF00664 ABC transporter transmembrane region AYWB_RS00160 PF12113 AYWB_RS00160 AYWB_RS00165 PF12113 AYWB_RS00165 AYWB_RS00220 PF00390 Malic enzyme, N-terminal domain AYWB_RS00220 PF03949 Malic enzyme, NAD binding domain AYWB_RS00225 PF03390 AYWB_RS00225 AYWB_RS00230 PF01066 CDP-alcohol phosphatidyltransferase AYWB_RS00235 PF00270 DEAD/DEAH box helicase AYWB_RS00235 PF00271 Helicase conserved C-terminal domain AYWB_RS00235 PF03880 DbpA RNA binding domain AYWB_RS00255 PF01628 HrcA protein C terminal domain AYWB_RS00260 PF01025 GrpE AYWB_RS00265 PF00012 Hsp70 protein AYWB_RS00270 PF00226 DnaJ domain AYWB_RS00270 PF00684 DnaJ central domain AYWB_RS00270 PF01556 DnaJ C terminal domain AYWB_RS00275 PF00448 SRP54-type protein, GTPase domain AYWB_RS00275 PF02881 SRP54-type protein, helical bundle domain AYWB_RS00280 PF00448 SRP54-type protein, GTPase domain AYWB_RS00280 PF02881 SRP54-type protein, helical bundle domain AYWB_RS00280 PF02978 Signal peptide binding domain AYWB_RS00290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYWB_RS00290 PF06827 Zinc finger found in FPG and IleRS AYWB_RS00290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYWB_RS00295 PF07261 Replication initiation and membrane attachment AYWB_RS00300 PF01695 IstB-like ATP binding protein AYWB_RS00305 PF00313 'Cold-shock' DNA-binding domain AYWB_RS00330 PF12113 AYWB_RS00330 AYWB_RS00340 PF02223 Thymidylate kinase AYWB_RS00375 PF11178 AYWB_RS00375 AYWB_RS00380 PF00580 UvrD/REP helicase N-terminal domain AYWB_RS00380 PF13361 UvrD-like helicase C-terminal domain AYWB_RS00380 PF13538 UvrD-like helicase C-terminal domain AYWB_RS00400 PF13276 AYWB_RS00400 AYWB_RS00415 PF02734 DAK2 domain AYWB_RS00415 PF13684 Dihydroxyacetone kinase family AYWB_RS00425 PF13343 Bacterial extracellular solute-binding protein AYWB_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS00440 PF00005 ABC transporter AYWB_RS00440 PF08402 TOBE domain AYWB_RS00445 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS00445 PF01434 Peptidase family M41 AYWB_RS00455 PF02645 Uncharacterised protein, DegV family COG1307 AYWB_RS00480 PF08282 haloacid dehalogenase-like hydrolase AYWB_RS00485 PF00753 Metallo-beta-lactamase superfamily AYWB_RS00485 PF07521 RNA-metabolising metallo-beta-lactamase AYWB_RS00490 PF01351 Ribonuclease HII AYWB_RS00490 PF11858 Domain of unknown function (DUF3378) AYWB_RS00495 PF01230 HIT domain AYWB_RS00500 PF12847 Methyltransferase domain AYWB_RS00505 PF00140 Sigma-70 factor, region 1 AYWB_RS00505 PF04539 Sigma-70 region 3 AYWB_RS00505 PF04542 Sigma-70 region 2 AYWB_RS00505 PF04545 Sigma-70, region 4 AYWB_RS00510 PF01807 CHC2 zinc finger AYWB_RS00510 PF08275 DNA primase catalytic core, N-terminal domain AYWB_RS00510 PF13155 Toprim-like AYWB_RS00515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_RS00515 PF03129 Anticodon binding domain AYWB_RS00520 PF01926 50S ribosome-binding GTPase AYWB_RS00520 PF07650 KH domain AYWB_RS00525 PF02130 Uncharacterized protein family UPF0054 AYWB_RS00530 PF01165 Ribosomal protein S21 AYWB_RS00535 PF09588 YqaJ-like viral recombinase domain AYWB_RS00545 PF00580 UvrD/REP helicase N-terminal domain AYWB_RS00545 PF13361 UvrD-like helicase C-terminal domain AYWB_RS00550 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYWB_RS00550 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AYWB_RS00555 PF12169 DNA polymerase III subunits gamma and tau domain III AYWB_RS00555 PF13177 DNA polymerase III, delta subunit AYWB_RS00560 PF02575 YbaB/EbfC DNA-binding family AYWB_RS00570 PF01066 CDP-alcohol phosphatidyltransferase AYWB_RS00575 PF02666 AYWB_RS00575 AYWB_RS00580 PF00117 Glutamine amidotransferase class-I AYWB_RS00580 PF06418 CTP synthase N-terminus AYWB_RS00590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYWB_RS00590 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS00610 PF00436 Single-strand binding protein family AYWB_RS00615 PF00152 tRNA synthetases class II (D, K and N) AYWB_RS00615 PF01336 OB-fold nucleic acid binding domain AYWB_RS00620 PF02811 PHP domain AYWB_RS00620 PF07733 Bacterial DNA polymerase III alpha subunit AYWB_RS00620 PF14579 Helix-hairpin-helix motif AYWB_RS00635 PF01409 tRNA synthetases class II core domain (F) AYWB_RS00635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYWB_RS00640 PF01588 Putative tRNA binding domain AYWB_RS00640 PF03147 Ferredoxin-fold anticodon binding domain AYWB_RS00640 PF03483 B3/4 domain AYWB_RS00640 PF03484 tRNA synthetase B5 domain AYWB_RS00650 PF00676 Dehydrogenase E1 component AYWB_RS00655 PF02779 Transketolase, pyrimidine binding domain AYWB_RS00655 PF02780 Transketolase, C-terminal domain AYWB_RS00660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYWB_RS00660 PF00364 Biotin-requiring enzyme AYWB_RS00660 PF02817 e3 binding domain AYWB_RS00665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYWB_RS00665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYWB_RS00670 PF01026 TatD related DNase AYWB_RS00680 PF02504 Fatty acid synthesis protein AYWB_RS00685 PF00035 Double-stranded RNA binding motif AYWB_RS00685 PF14622 Ribonuclease-III-like AYWB_RS00690 PF07261 Replication initiation and membrane attachment AYWB_RS00700 PF11178 AYWB_RS00700 AYWB_RS00720 PF00436 Single-strand binding protein family AYWB_RS00740 PF11178 AYWB_RS00740 AYWB_RS00765 PF11178 AYWB_RS00765 AYWB_RS00795 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS00820 PF00665 Integrase core domain AYWB_RS00820 PF13276 AYWB_RS00820 AYWB_RS00835 PF08275 DNA primase catalytic core, N-terminal domain AYWB_RS00835 PF13155 Toprim-like AYWB_RS00840 PF03796 DnaB-like helicase C terminal domain AYWB_RS00850 PF02223 Thymidylate kinase AYWB_RS00855 PF09588 YqaJ-like viral recombinase domain AYWB_RS00880 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS00905 PF00216 Bacterial DNA-binding protein AYWB_RS00910 PF00436 Single-strand binding protein family AYWB_RS00915 PF04542 Sigma-70 region 2 AYWB_RS00940 PF12113 AYWB_RS00940 AYWB_RS00945 PF12113 AYWB_RS00945 AYWB_RS00970 PF02086 D12 class N6 adenine-specific DNA methyltransferase AYWB_RS00975 PF02086 D12 class N6 adenine-specific DNA methyltransferase AYWB_RS00985 PF00216 Bacterial DNA-binding protein AYWB_RS01010 PF00665 Integrase core domain AYWB_RS01025 PF08275 DNA primase catalytic core, N-terminal domain AYWB_RS01025 PF13155 Toprim-like AYWB_RS01030 PF03796 DnaB-like helicase C terminal domain AYWB_RS01040 PF02223 Thymidylate kinase AYWB_RS01045 PF09588 YqaJ-like viral recombinase domain AYWB_RS01055 PF12113 AYWB_RS01055 AYWB_RS01080 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS01085 PF00216 Bacterial DNA-binding protein AYWB_RS01090 PF00436 Single-strand binding protein family AYWB_RS01095 PF04542 Sigma-70 region 2 AYWB_RS01105 PF12113 AYWB_RS01105 AYWB_RS01110 PF12113 AYWB_RS01110 AYWB_RS01120 PF00163 Ribosomal protein S4/S9 N-terminal domain AYWB_RS01120 PF01479 S4 domain AYWB_RS01125 PF00122 E1-E2 ATPase AYWB_RS01125 PF00689 Cation transporting ATPase, C-terminus AYWB_RS01125 PF00690 Cation transporter/ATPase, N-terminus AYWB_RS01125 PF00702 haloacid dehalogenase-like hydrolase AYWB_RS01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding AYWB_RS01135 PF02645 Uncharacterised protein, DegV family COG1307 AYWB_RS01155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYWB_RS01160 PF00814 Glycoprotease family AYWB_RS01165 PF00814 Glycoprotease family AYWB_RS01170 PF02367 Uncharacterised P-loop hydrolase UPF0079 AYWB_RS01175 PF00521 DNA gyrase/topoisomerase IV, subunit A AYWB_RS01175 PF03989 DNA gyrase C-terminal domain, beta-propeller AYWB_RS01180 PF00204 DNA gyrase B AYWB_RS01180 PF00986 DNA gyrase B subunit, carboxyl terminus AYWB_RS01180 PF01751 Toprim domain AYWB_RS01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYWB_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS01290 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYWB_RS01295 PF00005 ABC transporter AYWB_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS01320 PF11178 AYWB_RS01320 AYWB_RS01330 PF00436 Single-strand binding protein family AYWB_RS01335 PF00216 Bacterial DNA-binding protein AYWB_RS01350 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS01375 PF12113 AYWB_RS01375 AYWB_RS01385 PF02223 Thymidylate kinase AYWB_RS01395 PF03796 DnaB-like helicase C terminal domain AYWB_RS01400 PF08275 DNA primase catalytic core, N-terminal domain AYWB_RS01400 PF13155 Toprim-like AYWB_RS01410 PF00665 Integrase core domain AYWB_RS01410 PF13276 AYWB_RS01410 AYWB_RS01415 PF05496 Holliday junction DNA helicase ruvB N-terminus AYWB_RS01415 PF12002 MgsA AAA+ ATPase C terminal AYWB_RS01415 PF16193 AYWB_RS01415 AYWB_RS01420 PF00665 Integrase core domain AYWB_RS01420 PF13276 AYWB_RS01420 AYWB_RS01440 PF12113 AYWB_RS01440 AYWB_RS01450 PF11178 AYWB_RS01450 AYWB_RS01475 PF00293 NUDIX domain AYWB_RS01485 PF00271 Helicase conserved C-terminal domain AYWB_RS01485 PF01043 SecA preprotein cross-linking domain AYWB_RS01485 PF07516 SecA Wing and Scaffold domain AYWB_RS01485 PF07517 SecA DEAD-like domain AYWB_RS01490 PF00472 RF-1 domain AYWB_RS01490 PF03462 PCRF domain AYWB_RS01495 PF00886 Ribosomal protein S16 AYWB_RS01500 PF01746 tRNA (Guanine-1)-methyltransferase AYWB_RS01505 PF01245 Ribosomal protein L19 AYWB_RS01510 PF00579 tRNA synthetases class I (W and Y) AYWB_RS01515 PF00266 Aminotransferase class-V AYWB_RS01520 PF01592 NifU-like N terminal domain AYWB_RS01525 PF00579 tRNA synthetases class I (W and Y) AYWB_RS01530 PF00929 Exonuclease AYWB_RS01530 PF02811 PHP domain AYWB_RS01530 PF07733 Bacterial DNA polymerase III alpha subunit AYWB_RS01530 PF14579 Helix-hairpin-helix motif AYWB_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS01545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYWB_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS01550 PF00750 tRNA synthetases class I (R) AYWB_RS01550 PF03485 Arginyl tRNA synthetase N terminal domain AYWB_RS01550 PF05746 DALR anticodon binding domain AYWB_RS01555 PF01261 Xylose isomerase-like TIM barrel AYWB_RS01560 PF00270 DEAD/DEAH box helicase AYWB_RS01560 PF00271 Helicase conserved C-terminal domain AYWB_RS01570 PF02660 AYWB_RS01570 AYWB_RS01575 PF00533 BRCA1 C Terminus (BRCT) domain AYWB_RS01575 PF01653 NAD-dependent DNA ligase adenylation domain AYWB_RS01575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYWB_RS01575 PF03120 NAD-dependent DNA ligase OB-fold domain AYWB_RS01575 PF12826 Helix-hairpin-helix motif AYWB_RS01580 PF02650 WhiA C-terminal HTH domain AYWB_RS01580 PF10298 WhiA N-terminal LAGLIDADG-like domain AYWB_RS01580 PF14527 WhiA LAGLIDADG-like domain AYWB_RS01585 PF01648 4'-phosphopantetheinyl transferase superfamily AYWB_RS01590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYWB_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYWB_RS01595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYWB_RS01595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYWB_RS01600 PF01029 NusB family AYWB_RS01610 PF00009 Elongation factor Tu GTP binding domain AYWB_RS01610 PF00679 Elongation factor G C-terminus AYWB_RS01610 PF03144 Elongation factor Tu domain 2 AYWB_RS01610 PF06421 GTP-binding protein LepA C-terminus AYWB_RS01615 PF01523 Putative modulator of DNA gyrase AYWB_RS01620 PF01523 Putative modulator of DNA gyrase AYWB_RS01625 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS01625 PF02190 ATP-dependent protease La (LON) domain AYWB_RS01625 PF05362 Lon protease (S16) C-terminal proteolytic domain AYWB_RS01630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYWB_RS01630 PF05697 Bacterial trigger factor protein (TF) AYWB_RS01630 PF05698 Bacterial trigger factor protein (TF) C-terminus AYWB_RS01635 PF00005 ABC transporter AYWB_RS01650 PF12113 AYWB_RS01650 AYWB_RS01700 PF04542 Sigma-70 region 2 AYWB_RS01705 PF13276 AYWB_RS01705 AYWB_RS01715 PF11178 AYWB_RS01715 AYWB_RS01725 PF04542 Sigma-70 region 2 AYWB_RS01735 PF00665 Integrase core domain AYWB_RS01750 PF12113 AYWB_RS01750 AYWB_RS01755 PF12113 AYWB_RS01755 AYWB_RS01760 PF12113 AYWB_RS01760 AYWB_RS01765 PF12113 AYWB_RS01765 AYWB_RS01770 PF12113 AYWB_RS01770 AYWB_RS01795 PF00216 Bacterial DNA-binding protein AYWB_RS01800 PF00436 Single-strand binding protein family AYWB_RS01805 PF02086 D12 class N6 adenine-specific DNA methyltransferase AYWB_RS01820 PF00436 Single-strand binding protein family AYWB_RS01855 PF03796 DnaB-like helicase C terminal domain AYWB_RS01890 PF00881 Nitroreductase family AYWB_RS01895 PF01541 GIY-YIG catalytic domain AYWB_RS01895 PF02151 UvrB/uvrC motif AYWB_RS01895 PF08459 UvrC Helix-hairpin-helix N-terminal AYWB_RS01900 PF00271 Helicase conserved C-terminal domain AYWB_RS01900 PF02151 UvrB/uvrC motif AYWB_RS01900 PF04851 Type III restriction enzyme, res subunit AYWB_RS01900 PF12344 Ultra-violet resistance protein B AYWB_RS01910 PF12113 AYWB_RS01910 AYWB_RS01945 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS01960 PF03099 Biotin/lipoate A/B protein ligase family AYWB_RS01960 PF10437 Bacterial lipoate protein ligase C-terminus AYWB_RS01970 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS01975 PF00398 Ribosomal RNA adenine dimethylase AYWB_RS01980 PF01411 tRNA synthetases class II (A) AYWB_RS01980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYWB_RS01990 PF03652 Uncharacterised protein family (UPF0081) AYWB_RS01995 PF01596 O-methyltransferase AYWB_RS02000 PF01272 Transcription elongation factor, GreA/GreB, C-term AYWB_RS02000 PF03449 Transcription elongation factor, N-terminal AYWB_RS02005 PF09419 AYWB_RS02005 AYWB_RS02015 PF03602 Conserved hypothetical protein 95 AYWB_RS02020 PF03672 AYWB_RS02020 AYWB_RS02025 PF14163 AYWB_RS02025 AYWB_RS02030 PF02566 OsmC-like protein AYWB_RS02035 PF01553 Acyltransferase AYWB_RS02040 PF00186 Dihydrofolate reductase AYWB_RS02045 PF00303 Thymidylate synthase AYWB_RS02050 PF01546 Peptidase family M20/M25/M40 AYWB_RS02050 PF07687 Peptidase dimerisation domain AYWB_RS02065 PF00224 Pyruvate kinase, barrel domain AYWB_RS02065 PF02887 Pyruvate kinase, alpha/beta domain AYWB_RS02070 PF03390 AYWB_RS02070 AYWB_RS02075 PF01676 Metalloenzyme superfamily AYWB_RS02075 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYWB_RS02080 PF00113 Enolase, C-terminal TIM barrel domain AYWB_RS02080 PF03952 Enolase, N-terminal domain AYWB_RS02085 PF00342 Phosphoglucose isomerase AYWB_RS02090 PF01554 MatE AYWB_RS02095 PF00365 Phosphofructokinase AYWB_RS02105 PF01131 DNA topoisomerase AYWB_RS02105 PF01396 AYWB_RS02105 AYWB_RS02105 PF01751 Toprim domain AYWB_RS02110 PF01926 50S ribosome-binding GTPase AYWB_RS02120 PF01132 Elongation factor P (EF-P) OB domain AYWB_RS02120 PF08207 Elongation factor P (EF-P) KOW-like domain AYWB_RS02120 PF09285 Elongation factor P, C-terminal AYWB_RS02125 PF01715 IPP transferase AYWB_RS02130 PF13277 YmdB-like protein AYWB_RS02135 PF00013 KH domain AYWB_RS02135 PF01966 HD domain AYWB_RS02135 PF12072 AYWB_RS02135 AYWB_RS02145 PF02646 AYWB_RS02145 AYWB_RS02160 PF01134 Glucose inhibited division protein A AYWB_RS02160 PF13932 GidA associated domain 3 AYWB_RS02165 PF02527 rRNA small subunit methyltransferase G AYWB_RS02170 PF12811 AYWB_RS02170 AYWB_RS02180 PF00009 Elongation factor Tu GTP binding domain AYWB_RS02180 PF03143 Elongation factor Tu C-terminal domain AYWB_RS02180 PF03144 Elongation factor Tu domain 2 AYWB_RS02185 PF00009 Elongation factor Tu GTP binding domain AYWB_RS02185 PF00679 Elongation factor G C-terminus AYWB_RS02185 PF03144 Elongation factor Tu domain 2 AYWB_RS02185 PF03764 Elongation factor G, domain IV AYWB_RS02185 PF14492 Elongation Factor G, domain II AYWB_RS02190 PF00177 Ribosomal protein S7p/S5e AYWB_RS02195 PF00164 Ribosomal protein S12/S23 AYWB_RS02200 PF00623 RNA polymerase Rpb1, domain 2 AYWB_RS02200 PF04983 RNA polymerase Rpb1, domain 3 AYWB_RS02200 PF04997 RNA polymerase Rpb1, domain 1 AYWB_RS02200 PF04998 RNA polymerase Rpb1, domain 5 AYWB_RS02200 PF05000 RNA polymerase Rpb1, domain 4 AYWB_RS02205 PF00562 RNA polymerase Rpb2, domain 6 AYWB_RS02205 PF04560 RNA polymerase Rpb2, domain 7 AYWB_RS02205 PF04561 RNA polymerase Rpb2, domain 2 AYWB_RS02205 PF04563 RNA polymerase beta subunit AYWB_RS02205 PF04565 RNA polymerase Rpb2, domain 3 AYWB_RS02205 PF10385 RNA polymerase beta subunit external 1 domain AYWB_RS02210 PF00542 Ribosomal protein L7/L12 C-terminal domain AYWB_RS02210 PF16320 AYWB_RS02210 AYWB_RS02215 PF00466 Ribosomal protein L10 AYWB_RS02220 PF00687 Ribosomal protein L1p/L10e family AYWB_RS02225 PF00298 Ribosomal protein L11, RNA binding domain AYWB_RS02225 PF03946 Ribosomal protein L11, N-terminal domain AYWB_RS02230 PF00467 KOW motif AYWB_RS02230 PF02357 Transcription termination factor nusG AYWB_RS02235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AYWB_RS02240 PF00471 Ribosomal protein L33 AYWB_RS02245 PF00588 SpoU rRNA Methylase family AYWB_RS02245 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYWB_RS02250 PF00122 E1-E2 ATPase AYWB_RS02250 PF00702 haloacid dehalogenase-like hydrolase AYWB_RS02255 PF00013 KH domain AYWB_RS02255 PF01138 3' exoribonuclease family, domain 1 AYWB_RS02255 PF03725 3' exoribonuclease family, domain 2 AYWB_RS02295 PF02096 60Kd inner membrane protein AYWB_RS02300 PF00825 Ribonuclease P AYWB_RS02305 PF00468 Ribosomal protein L34 AYWB_RS02310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_RS02310 PF03129 Anticodon binding domain AYWB_RS02310 PF09180 Prolyl-tRNA synthetase, C-terminal AYWB_RS02330 PF00471 Ribosomal protein L33 AYWB_RS02345 PF00216 Bacterial DNA-binding protein AYWB_RS02350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYWB_RS02350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYWB_RS02355 PF01926 50S ribosome-binding GTPase AYWB_RS02355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYWB_RS02360 PF02224 Cytidylate kinase AYWB_RS02365 PF00849 RNA pseudouridylate synthase AYWB_RS02365 PF01479 S4 domain AYWB_RS02370 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYWB_RS02375 PF00085 Thioredoxin AYWB_RS02385 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS02395 PF08264 Anticodon-binding domain of tRNA AYWB_RS02395 PF09334 tRNA synthetases class I (M) AYWB_RS02400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYWB_RS02405 PF13177 DNA polymerase III, delta subunit AYWB_RS02410 PF02223 Thymidylate kinase AYWB_RS02415 PF01416 tRNA pseudouridine synthase AYWB_RS02420 PF01196 Ribosomal protein L17 AYWB_RS02425 PF01000 RNA polymerase Rpb3/RpoA insert domain AYWB_RS02425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYWB_RS02425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYWB_RS02430 PF00411 Ribosomal protein S11 AYWB_RS02435 PF00416 Ribosomal protein S13/S18 AYWB_RS02440 PF00444 Ribosomal protein L36 AYWB_RS02445 PF01176 Translation initiation factor 1A / IF-1 AYWB_RS02450 PF00557 Metallopeptidase family M24 AYWB_RS02455 PF00406 Adenylate kinase AYWB_RS02455 PF05191 Adenylate kinase, active site lid AYWB_RS02460 PF00344 SecY translocase AYWB_RS02465 PF00828 Ribosomal protein L18e/L15 AYWB_RS02470 PF00327 Ribosomal protein L30p/L7e AYWB_RS02475 PF00333 Ribosomal protein S5, N-terminal domain AYWB_RS02475 PF03719 Ribosomal protein S5, C-terminal domain AYWB_RS02480 PF00861 Ribosomal L18p/L5e family AYWB_RS02485 PF00347 Ribosomal protein L6 AYWB_RS02490 PF00410 Ribosomal protein S8 AYWB_RS02495 PF00253 Ribosomal protein S14p/S29e AYWB_RS02500 PF00281 Ribosomal protein L5 AYWB_RS02500 PF00673 ribosomal L5P family C-terminus AYWB_RS02505 PF17136 AYWB_RS02505 AYWB_RS02510 PF00238 Ribosomal protein L14p/L23e AYWB_RS02515 PF00366 Ribosomal protein S17 AYWB_RS02520 PF00831 Ribosomal L29 protein AYWB_RS02525 PF00252 Ribosomal protein L16p/L10e AYWB_RS02530 PF00189 Ribosomal protein S3, C-terminal domain AYWB_RS02530 PF07650 KH domain AYWB_RS02535 PF00237 Ribosomal protein L22p/L17e AYWB_RS02540 PF00203 Ribosomal protein S19 AYWB_RS02545 PF00181 Ribosomal Proteins L2, RNA binding domain AYWB_RS02545 PF03947 Ribosomal Proteins L2, C-terminal domain AYWB_RS02550 PF00276 Ribosomal protein L23 AYWB_RS02555 PF00573 Ribosomal protein L4/L1 family AYWB_RS02560 PF00297 Ribosomal protein L3 AYWB_RS02565 PF00338 Ribosomal protein S10p/S20e AYWB_RS02570 PF01783 Ribosomal L32p protein family AYWB_RS02580 PF00005 ABC transporter AYWB_RS02580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYWB_RS02585 PF00005 ABC transporter AYWB_RS02590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYWB_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS02600 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS02605 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AYWB_RS02610 PF00122 E1-E2 ATPase AYWB_RS02610 PF00689 Cation transporting ATPase, C-terminus AYWB_RS02610 PF00690 Cation transporter/ATPase, N-terminus AYWB_RS02610 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit AYWB_RS02615 PF02588 AYWB_RS02615 AYWB_RS02620 PF00133 tRNA synthetases class I (I, L, M and V) AYWB_RS02620 PF08264 Anticodon-binding domain of tRNA AYWB_RS02625 PF01926 50S ribosome-binding GTPase AYWB_RS02625 PF06071 Protein of unknown function (DUF933) AYWB_RS02630 PF03193 Protein of unknown function, DUF258 AYWB_RS02635 PF00464 Serine hydroxymethyltransferase AYWB_RS02640 PF02361 Cobalt transport protein AYWB_RS02645 PF00005 ABC transporter AYWB_RS02650 PF00005 ABC transporter AYWB_RS02655 PF01432 Peptidase family M3 AYWB_RS02670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYWB_RS02670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYWB_RS02675 PF00162 Phosphoglycerate kinase AYWB_RS02680 PF01116 Fructose-bisphosphate aldolase class-II AYWB_RS02685 PF08282 haloacid dehalogenase-like hydrolase AYWB_RS02690 PF00121 Triosephosphate isomerase AYWB_RS02695 PF01148 Cytidylyltransferase family AYWB_RS02700 PF01765 Ribosome recycling factor AYWB_RS02705 PF00696 Amino acid kinase family AYWB_RS02710 PF00889 Elongation factor TS AYWB_RS02715 PF00318 Ribosomal protein S2 AYWB_RS02720 PF00692 dUTPase AYWB_RS02725 PF03167 Uracil DNA glycosylase superfamily AYWB_RS02735 PF11178 AYWB_RS02735 AYWB_RS02770 PF00871 Acetokinase family AYWB_RS02775 PF03006 AYWB_RS02775 AYWB_RS02790 PF00271 Helicase conserved C-terminal domain AYWB_RS02790 PF04851 Type III restriction enzyme, res subunit AYWB_RS02795 PF00571 CBS domain AYWB_RS02795 PF01595 AYWB_RS02795 AYWB_RS02795 PF03471 Transporter associated domain AYWB_RS02800 PF01195 Peptidyl-tRNA hydrolase AYWB_RS02805 PF02033 Ribosome-binding factor A AYWB_RS02810 PF00009 Elongation factor Tu GTP binding domain AYWB_RS02810 PF04760 Translation initiation factor IF-2, N-terminal region AYWB_RS02810 PF11987 Translation-initiation factor 2 AYWB_RS02815 PF04296 Protein of unknown function (DUF448) AYWB_RS02820 PF08529 NusA N-terminal domain AYWB_RS02820 PF13184 NusA-like KH domain AYWB_RS02820 PF13509 S1 domain AYWB_RS02825 PF11074 AYWB_RS02825 AYWB_RS02830 PF01668 SmpB protein AYWB_RS02835 PF00719 Inorganic pyrophosphatase AYWB_RS02840 PF00588 SpoU rRNA Methylase family AYWB_RS02845 PF02568 Thiamine biosynthesis protein (ThiI) AYWB_RS02845 PF02926 THUMP domain AYWB_RS02850 PF00485 Phosphoribulokinase / Uridine kinase family AYWB_RS02855 PF01406 tRNA synthetases class I (C) catalytic domain AYWB_RS02860 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYWB_RS02865 PF00380 Ribosomal protein S9/S16 AYWB_RS02870 PF00572 Ribosomal protein L13 AYWB_RS02880 PF01965 DJ-1/PfpI family AYWB_RS02885 PF00312 Ribosomal protein S15 AYWB_RS02890 PF06153 Protein of unknown function (DUF970) AYWB_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS02900 PF03180 NLPA lipoprotein AYWB_RS02905 PF00005 ABC transporter AYWB_RS02910 PF00849 RNA pseudouridylate synthase AYWB_RS02910 PF01479 S4 domain AYWB_RS02915 PF00004 ATPase family associated with various cellular activities (AAA) AYWB_RS02915 PF01434 Peptidase family M41 AYWB_RS02920 PF01171 PP-loop family AYWB_RS02920 PF11734 TilS substrate C-terminal domain AYWB_RS02925 PF00152 tRNA synthetases class II (D, K and N) AYWB_RS02925 PF01336 OB-fold nucleic acid binding domain AYWB_RS02930 PF03129 Anticodon binding domain AYWB_RS02930 PF13393 Histidyl-tRNA synthetase AYWB_RS02935 PF02824 TGS domain AYWB_RS02935 PF04607 Region found in RelA / SpoT proteins AYWB_RS02935 PF13291 ACT domain AYWB_RS02935 PF13328 HD domain AYWB_RS02940 PF03054 tRNA methyl transferase AYWB_RS02945 PF00795 Carbon-nitrogen hydrolase AYWB_RS02950 PF15438 AYWB_RS02950 AYWB_RS02955 PF00118 TCP-1/cpn60 chaperonin family AYWB_RS02960 PF00166 Chaperonin 10 Kd subunit AYWB_RS02970 PF00830 Ribosomal L28 family AYWB_RS02975 PF01197 Ribosomal protein L31 AYWB_RS02980 PF00265 Thymidine kinase AYWB_RS02985 PF14437 AYWB_RS02985 AYWB_RS02990 PF01743 Poly A polymerase head domain AYWB_RS02990 PF12627 Probable RNA and SrmB- binding site of polymerase A AYWB_RS02990 PF13735 tRNA nucleotidyltransferase domain 2 putative AYWB_RS02995 PF01966 HD domain AYWB_RS03040 PF00005 ABC transporter AYWB_RS03050 PF00950 AYWB_RS03050 AYWB_RS03055 PF00950 AYWB_RS03055 AYWB_RS03060 PF00005 ABC transporter AYWB_RS03065 PF01297 Periplasmic solute binding protein family AYWB_RS03075 PF01018 GTP1/OBG AYWB_RS03075 PF01926 50S ribosome-binding GTPase AYWB_RS03075 PF09269 Domain of unknown function (DUF1967) AYWB_RS03080 PF01016 Ribosomal L27 protein AYWB_RS03085 PF04327 Protein of unknown function (DUF464) AYWB_RS03090 PF00829 Ribosomal prokaryotic L21 protein AYWB_RS03095 PF00581 Rhodanese-like domain AYWB_RS03095 PF12368 AYWB_RS03095 AYWB_RS03105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_RS03105 PF02403 Seryl-tRNA synthetase N-terminal domain AYWB_RS03110 PF01649 Ribosomal protein S20 AYWB_RS03115 PF00005 ABC transporter AYWB_RS03120 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYWB_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS03130 PF11178 AYWB_RS03130 AYWB_RS03140 PF12113 AYWB_RS03140 AYWB_RS03160 PF06130 AYWB_RS03160 AYWB_RS03165 PF01966 HD domain AYWB_RS03170 PF00398 Ribosomal RNA adenine dimethylase AYWB_RS03175 PF04026 SpoVG AYWB_RS03180 PF00122 E1-E2 ATPase AYWB_RS03180 PF00702 haloacid dehalogenase-like hydrolase AYWB_RS03185 PF01554 MatE AYWB_RS03195 PF01192 RNA polymerase Rpb6 AYWB_RS03200 PF00625 Guanylate kinase AYWB_RS03205 PF08264 Anticodon-binding domain of tRNA AYWB_RS03205 PF09334 tRNA synthetases class I (M) AYWB_RS03205 PF13603 Leucyl-tRNA synthetase, Domain 2 AYWB_RS03210 PF00550 Phosphopantetheine attachment site AYWB_RS03215 PF05343 M42 glutamyl aminopeptidase AYWB_RS03225 PF00453 Ribosomal protein L20 AYWB_RS03225 PF07498 Rho termination factor, N-terminal domain AYWB_RS03230 PF01632 Ribosomal protein L35 AYWB_RS03235 PF00707 Translation initiation factor IF-3, C-terminal domain AYWB_RS03235 PF05198 Translation initiation factor IF-3, N-terminal domain AYWB_RS03245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYWB_RS03245 PF03129 Anticodon binding domain AYWB_RS03245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYWB_RS03250 PF01368 DHH family AYWB_RS03255 PF01926 50S ribosome-binding GTPase AYWB_RS03255 PF10396 GTP-binding protein TrmE N-terminus AYWB_RS03255 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AYWB_RS03260 PF01368 DHH family AYWB_RS03260 PF02272 DHHA1 domain AYWB_RS03265 PF13416 Bacterial extracellular solute-binding protein AYWB_RS03270 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS03275 PF00528 Binding-protein-dependent transport system inner membrane component AYWB_RS03280 PF00005 ABC transporter AYWB_RS03285 PF00152 tRNA synthetases class II (D, K and N) AYWB_RS03285 PF01336 OB-fold nucleic acid binding domain AYWB_RS03290 PF00308 Bacterial dnaA protein AYWB_RS03290 PF11638 DnaA N-terminal domain AYWB_RS03315 PF00308 Bacterial dnaA protein AYWB_RS03315 PF11638 DnaA N-terminal domain AYWB_RS03335 PF00308 Bacterial dnaA protein AYWB_RS03335 PF11638 DnaA N-terminal domain AYWB_RS03370 PF00308 Bacterial dnaA protein AYWB_RS03370 PF11638 DnaA N-terminal domain AYWB_RS03400 PF00436 Single-strand binding protein family AYWB_RS03410 PF01367 5'-3' exonuclease, C-terminal SAM fold AYWB_RS03410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYWB_RS03415 PF00733 Asparagine synthase AYWB_RS03420 PF00005 ABC transporter AYWB_RS03425 PF11178 AYWB_RS03425 AYWB_RS03430 PF11178 AYWB_RS03430 AYWB_RS03465 PF11178 AYWB_RS03465