AYWB_RS00005	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AYWB_RS00010	SM00480	DNA polymerase III beta subunit
AYWB_RS00030	SM00267	diguanylate cyclase
AYWB_RS00040	SM00937	AYWB_RS00040
AYWB_RS00070	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00090	SM00831	Cation transporter/ATPase, N-terminus
AYWB_RS00135	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00140	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00220	SM00919	Malic enzyme, NAD binding domain
AYWB_RS00220	SM01274	AYWB_RS00220
AYWB_RS00235	SM00487	DEAD-like helicases superfamily
AYWB_RS00235	SM00490	helicase superfamily c-terminal domain
AYWB_RS00270	SM00271	DnaJ molecular chaperone homology domain
AYWB_RS00275	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00275	SM00962	SRP54-type protein, GTPase domain
AYWB_RS00275	SM00963	SRP54-type protein, helical bundle domain
AYWB_RS00280	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00280	SM00962	SRP54-type protein, GTPase domain
AYWB_RS00280	SM00963	SRP54-type protein, helical bundle domain
AYWB_RS00290	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AYWB_RS00290	SM01232	AYWB_RS00290
AYWB_RS00305	SM00357	Cold shock protein domain
AYWB_RS00415	SM01120	AYWB_RS00415
AYWB_RS00415	SM01121	AYWB_RS00415
AYWB_RS00440	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00445	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00485	SM00849	Metallo-beta-lactamase superfamily
AYWB_RS00510	SM00400	zinc finger
AYWB_RS00510	SM00493	AYWB_RS00510
AYWB_RS00555	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00590	SM00062	Bacterial periplasmic substrate-binding proteins
AYWB_RS00620	SM00481	DNA polymerase alpha chain like domain
AYWB_RS00640	SM00873	B3/4 domain
AYWB_RS00640	SM00874	tRNA synthetase B5 domain
AYWB_RS00640	SM00896	Ferredoxin-fold anticodon binding domain
AYWB_RS00655	SM00861	Transketolase, pyrimidine binding domain
AYWB_RS00685	SM00358	Double-stranded RNA binding motif
AYWB_RS00685	SM00535	Ribonuclease III family
AYWB_RS00835	SM00493	AYWB_RS00835
AYWB_RS00880	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS00905	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS00985	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS01025	SM00493	AYWB_RS01025
AYWB_RS01080	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01085	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS01120	SM00363	S4 RNA-binding domain
AYWB_RS01120	SM01390	AYWB_RS01120
AYWB_RS01125	SM00831	Cation transporter/ATPase, N-terminus
AYWB_RS01175	SM00434	DNA Topoisomerase IV
AYWB_RS01180	SM00387	Histidine kinase-like ATPases
AYWB_RS01180	SM00433	TopoisomeraseII
AYWB_RS01290	SM00062	Bacterial periplasmic substrate-binding proteins
AYWB_RS01295	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01335	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS01350	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01400	SM00493	AYWB_RS01400
AYWB_RS01415	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01485	SM00957	SecA DEAD-like domain
AYWB_RS01485	SM00958	SecA preprotein cross-linking domain
AYWB_RS01490	SM00937	AYWB_RS01490
AYWB_RS01530	SM00479	AYWB_RS01530
AYWB_RS01530	SM00481	DNA polymerase alpha chain like domain
AYWB_RS01545	SM00062	Bacterial periplasmic substrate-binding proteins
AYWB_RS01550	SM00836	DALR anticodon binding domain
AYWB_RS01550	SM01016	Arginyl tRNA synthetase N terminal dom
AYWB_RS01555	SM00518	AP endonuclease family 2
AYWB_RS01560	SM00487	DEAD-like helicases superfamily
AYWB_RS01560	SM00490	helicase superfamily c-terminal domain
AYWB_RS01570	SM01207	AYWB_RS01570
AYWB_RS01575	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYWB_RS01575	SM00292	breast cancer carboxy-terminal domain
AYWB_RS01575	SM00532	Ligase N family
AYWB_RS01610	SM00838	Elongation factor G C-terminus
AYWB_RS01625	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01625	SM00464	Found in ATP-dependent protease La (LON)
AYWB_RS01795	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS01895	SM00465	GIY-YIG type nucleases (URI domain)
AYWB_RS01900	SM00487	DEAD-like helicases superfamily
AYWB_RS01900	SM00490	helicase superfamily c-terminal domain
AYWB_RS01945	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01970	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS01975	SM00650	Ribosomal RNA adenine dimethylases
AYWB_RS01980	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYWB_RS01990	SM00732	Likely ribonuclease with RNase H fold.
AYWB_RS02035	SM00563	Phosphate acyltransferases
AYWB_RS02080	SM01192	AYWB_RS02080
AYWB_RS02080	SM01193	AYWB_RS02080
AYWB_RS02105	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AYWB_RS02105	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AYWB_RS02105	SM00493	AYWB_RS02105
AYWB_RS02120	SM00841	Elongation factor P, C-terminal
AYWB_RS02120	SM01185	AYWB_RS02120
AYWB_RS02135	SM00322	K homology RNA-binding domain
AYWB_RS02135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYWB_RS02160	SM01228	AYWB_RS02160
AYWB_RS02185	SM00838	Elongation factor G C-terminus
AYWB_RS02185	SM00889	Elongation factor G, domain IV
AYWB_RS02200	SM00663	RNA polymerase I subunit A N-terminus
AYWB_RS02225	SM00649	Ribosomal protein L11/L12
AYWB_RS02230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AYWB_RS02230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AYWB_RS02245	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AYWB_RS02255	SM00316	Ribosomal protein S1-like RNA-binding domain
AYWB_RS02255	SM00322	K homology RNA-binding domain
AYWB_RS02310	SM00946	Prolyl-tRNA synthetase, C-terminal
AYWB_RS02345	SM00411	bacterial (prokaryotic) histone like domain
AYWB_RS02365	SM00363	S4 RNA-binding domain
AYWB_RS02425	SM00662	RNA polymerases D
AYWB_RS02510	SM01374	AYWB_RS02510
AYWB_RS02530	SM00322	K homology RNA-binding domain
AYWB_RS02545	SM01382	AYWB_RS02545
AYWB_RS02545	SM01383	AYWB_RS02545
AYWB_RS02565	SM01403	AYWB_RS02565
AYWB_RS02580	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02585	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02610	SM00831	Cation transporter/ATPase, N-terminus
AYWB_RS02645	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02650	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02670	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AYWB_RS02725	SM00986	Uracil DNA glycosylase superfamily
AYWB_RS02725	SM00987	UreE urease accessory protein, C-terminal domain 
AYWB_RS02790	SM00487	DEAD-like helicases superfamily
AYWB_RS02790	SM00490	helicase superfamily c-terminal domain
AYWB_RS02795	SM01091	Transporter associated domain
AYWB_RS02845	SM00981	AYWB_RS02845
AYWB_RS02885	SM01387	AYWB_RS02885
AYWB_RS02905	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02910	SM00363	S4 RNA-binding domain
AYWB_RS02915	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS02920	SM00977	TilS substrate C-terminal domain
AYWB_RS02935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYWB_RS02935	SM00954	Region found in RelA / SpoT proteins
AYWB_RS02960	SM00883	Chaperonin 10 Kd subunit
AYWB_RS03040	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03060	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03095	SM00450	Rhodanese Homology Domain
AYWB_RS03115	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03120	SM00062	Bacterial periplasmic substrate-binding proteins
AYWB_RS03165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYWB_RS03170	SM00650	Ribosomal RNA adenine dimethylases
AYWB_RS03195	SM01409	AYWB_RS03195
AYWB_RS03200	SM00072	Guanylate kinase homologues.
AYWB_RS03225	SM00959	Rho termination factor, N-terminal domain
AYWB_RS03245	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYWB_RS03280	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03290	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03315	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03335	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03370	SM00382	ATPases associated with a variety of cellular activities
AYWB_RS03410	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AYWB_RS03410	SM00475	5'-3' exonuclease
AYWB_RS03420	SM00382	ATPases associated with a variety of cellular activities
