locus-tag	class	description
APAR_RS00015	PF00308	Bacterial dnaA  protein
APAR_RS00015	PF11638	DnaA N-terminal domain
APAR_RS00015	PF08299	Bacterial dnaA protein helix-turn-helix
APAR_RS00020	PF00712	DNA polymerase III beta subunit, N-terminal domain
APAR_RS00020	PF02768	DNA polymerase III beta subunit, C-terminal domain
APAR_RS00020	PF02767	DNA polymerase III beta subunit, central domain
APAR_RS00025	PF02463	RecF/RecN/SMC N terminal domain
APAR_RS00035	PF01751	Toprim domain
APAR_RS00035	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS00035	PF00986	DNA gyrase B subunit, carboxyl terminus
APAR_RS00035	PF00204	DNA gyrase B
APAR_RS00040	PF03989	DNA gyrase C-terminal domain, beta-propeller
APAR_RS00040	PF00521	DNA gyrase/topoisomerase IV, subunit A
APAR_RS00065	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS00070	PF08402	TOBE domain
APAR_RS00070	PF00005	ABC transporter
APAR_RS00075	PF00356	Bacterial regulatory proteins, lacI family
APAR_RS00080	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS00100	PF00679	Elongation factor G C-terminus
APAR_RS00100	PF00009	Elongation factor Tu GTP binding domain
APAR_RS00100	PF03144	Elongation factor Tu domain 2
APAR_RS00105	PF03458	UPF0126 domain
APAR_RS00125	PF01250	Ribosomal protein S6
APAR_RS00130	PF00436	Single-strand binding protein family
APAR_RS00135	PF01084	Ribosomal protein S18
APAR_RS00145	PF03948	Ribosomal protein L9, C-terminal domain
APAR_RS00145	PF01281	Ribosomal protein L9, N-terminal domain
APAR_RS00155	PF00772	DnaB-like helicase N terminal domain
APAR_RS00155	PF03796	DnaB-like helicase C terminal domain
APAR_RS00160	PF00709	Adenylosuccinate synthetase
APAR_RS00165	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
APAR_RS00165	PF02843	Phosphoribosylglycinamide synthetase, C domain
APAR_RS00165	PF02844	Phosphoribosylglycinamide synthetase, N domain
APAR_RS00170	PF00293	NUDIX domain
APAR_RS00175	PF00664	ABC transporter transmembrane region
APAR_RS00175	PF00005	ABC transporter
APAR_RS00185	PF08543	Phosphomethylpyrimidine kinase
APAR_RS00190	PF00731	AIR carboxylase
APAR_RS00195	PF04203	Sortase domain
APAR_RS00200	PF13537	Glutamine amidotransferase domain
APAR_RS00200	PF00156	Phosphoribosyl transferase domain
APAR_RS00205	PF00586	AIR synthase related protein, N-terminal domain
APAR_RS00205	PF02769	AIR synthase related protein, C-terminal domain
APAR_RS00210	PF00551	Formyl transferase
APAR_RS00230	PF00106	short chain dehydrogenase
APAR_RS00245	PF01384	Phosphate transporter family
APAR_RS00250	PF00588	SpoU rRNA Methylase family
APAR_RS00295	PF05958	tRNA (Uracil-5-)-methyltransferase
APAR_RS00295	PF01938	TRAM domain
APAR_RS00300	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
APAR_RS00300	PF00056	lactate/malate dehydrogenase, NAD binding domain
APAR_RS00315	PF00005	ABC transporter
APAR_RS00325	PF14492	Elongation Factor G, domain II
APAR_RS00325	PF03764	Elongation factor G, domain IV
APAR_RS00325	PF00009	Elongation factor Tu GTP binding domain
APAR_RS00325	PF03144	Elongation factor Tu domain 2
APAR_RS00325	PF00679	Elongation factor G C-terminus
APAR_RS00330	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
APAR_RS00330	PF02779	Transketolase, pyrimidine binding domain
APAR_RS00330	PF02780	Transketolase, C-terminal domain
APAR_RS00335	PF00465	Iron-containing alcohol dehydrogenase 
APAR_RS00345	PF00258	Flavodoxin
APAR_RS00345	PF00753	Metallo-beta-lactamase superfamily
APAR_RS00350	PF01595	Cyclin M transmembrane N-terminal domain
APAR_RS00350	PF03471	Transporter associated domain
APAR_RS00350	PF00571	CBS domain
APAR_RS00375	PF03448	MgtE intracellular N domain
APAR_RS00375	PF01769	Divalent cation transporter
APAR_RS00375	PF00571	CBS domain
APAR_RS00380	PF04011	LemA family
APAR_RS00390	PF14437	MafB19-like deaminase
APAR_RS00395	PF17785	PUA-like domain
APAR_RS00395	PF10672	S-adenosylmethionine-dependent methyltransferase
APAR_RS00405	PF00270	DEAD/DEAH box helicase
APAR_RS00405	PF00271	Helicase conserved C-terminal domain
APAR_RS00410	PF04204	Homoserine O-succinyltransferase 
APAR_RS00415	PF12850	Calcineurin-like phosphoesterase superfamily domain
APAR_RS00420	PF07702	UTRA domain
APAR_RS00420	PF00392	Bacterial regulatory proteins, gntR family
APAR_RS00425	PF00232	Glycosyl hydrolase family 1
APAR_RS00430	PF02378	Phosphotransferase system, EIIC 
APAR_RS00435	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS00440	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
APAR_RS00450	PF03590	Aspartate-ammonia ligase
APAR_RS00455	PF00210	Ferritin-like domain
APAR_RS00465	PF13237	4Fe-4S dicluster domain
APAR_RS00465	PF12801	4Fe-4S binding domain
APAR_RS00470	PF00578	AhpC/TSA family
APAR_RS00475	PF00072	Response regulator receiver domain
APAR_RS00475	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS00480	PF00672	HAMP domain
APAR_RS00480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS00480	PF00512	His Kinase A (phospho-acceptor) domain
APAR_RS00485	PF00923	Transaldolase/Fructose-6-phosphate aldolase
APAR_RS00495	PF00012	Hsp70 protein
APAR_RS00500	PF01025	GrpE
APAR_RS00505	PF01556	DnaJ C terminal domain
APAR_RS00505	PF00226	DnaJ domain
APAR_RS00505	PF00684	DnaJ central domain
APAR_RS00510	PF13411	MerR HTH family regulatory protein
APAR_RS00525	PF00004	ATPase family associated with various cellular activities (AAA)
APAR_RS00525	PF17871	AAA lid domain
APAR_RS00525	PF02861	Clp amino terminal domain, pathogenicity island component
APAR_RS00525	PF10431	C-terminal, D2-small domain, of ClpB protein 
APAR_RS00525	PF07724	AAA domain (Cdc48 subfamily)
APAR_RS00535	PF02837	Glycosyl hydrolases family 2, sugar binding domain
APAR_RS00535	PF16355	Domain of unknown function (DUF4982)
APAR_RS00535	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
APAR_RS00535	PF00703	Glycosyl hydrolases family 2
APAR_RS00535	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
APAR_RS00545	PF00011	Hsp20/alpha crystallin family
APAR_RS00550	PF12706	Beta-lactamase superfamily domain
APAR_RS00555	PF11734	TilS substrate C-terminal domain
APAR_RS00555	PF01171	PP-loop family
APAR_RS00560	PF00156	Phosphoribosyl transferase domain
APAR_RS00565	PF00155	Aminotransferase class I and II
APAR_RS00570	PF02811	PHP domain
APAR_RS00575	PF03372	Endonuclease/Exonuclease/phosphatase family
APAR_RS00580	PF00809	Pterin binding enzyme
APAR_RS00590	PF03309	Type III pantothenate kinase
APAR_RS00595	PF01197	Ribosomal protein L31
APAR_RS00600	PF12169	DNA polymerase III subunits gamma and tau domain III
APAR_RS00605	PF02575	YbaB/EbfC DNA-binding family
APAR_RS00610	PF13662	Toprim domain
APAR_RS00610	PF02132	RecR protein
APAR_RS00610	PF00633	Helix-hairpin-helix motif
APAR_RS00630	PF02082	Transcriptional regulator
APAR_RS00635	PF00730	HhH-GPD superfamily base excision DNA repair protein
APAR_RS00635	PF00633	Helix-hairpin-helix motif
APAR_RS00635	PF10576	Iron-sulfur binding domain of endonuclease III
APAR_RS00640	PF02915	Rubrerythrin
APAR_RS00645	PF00730	HhH-GPD superfamily base excision DNA repair protein
APAR_RS00645	PF00633	Helix-hairpin-helix motif
APAR_RS00650	PF17757	UvrB interaction domain
APAR_RS00650	PF03461	TRCF domain
APAR_RS00650	PF02559	CarD-like/TRCF domain
APAR_RS00650	PF00271	Helicase conserved C-terminal domain
APAR_RS00650	PF00270	DEAD/DEAH box helicase
APAR_RS00655	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
APAR_RS00660	PF03819	MazG nucleotide pyrophosphohydrolase domain
APAR_RS00670	PF02541	Ppx/GppA phosphatase family
APAR_RS00670	PF01761	3-dehydroquinate synthase
APAR_RS00690	PF02780	Transketolase, C-terminal domain
APAR_RS00690	PF02779	Transketolase, pyrimidine binding domain
APAR_RS00690	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
APAR_RS00710	PF00465	Iron-containing alcohol dehydrogenase 
APAR_RS00715	PF01791	DeoC/LacD family aldolase
APAR_RS00720	PF04055	Radical SAM superfamily
APAR_RS00725	PF11230	Protein of unknown function (DUF3029)
APAR_RS00735	PF04227	Indigoidine synthase A like protein
APAR_RS00740	PF00294	pfkB family carbohydrate kinase
APAR_RS00745	PF01676	Metalloenzyme superfamily
APAR_RS00750	PF01048	Phosphorylase superfamily
APAR_RS00755	PF02608	ABC transporter substrate-binding protein PnrA-like
APAR_RS00760	PF00005	ABC transporter
APAR_RS00765	PF02653	Branched-chain amino acid transport system / permease component
APAR_RS00770	PF02653	Branched-chain amino acid transport system / permease component
APAR_RS00775	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
APAR_RS00780	PF00591	Glycosyl transferase family, a/b domain
APAR_RS00780	PF02885	Glycosyl transferase family, helical bundle domain
APAR_RS00780	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
APAR_RS00795	PF00356	Bacterial regulatory proteins, lacI family
APAR_RS00795	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
APAR_RS00800	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS00805	PF03611	PTS system sugar-specific permease component
APAR_RS00820	PF01546	Peptidase family M20/M25/M40
APAR_RS00820	PF07687	Peptidase dimerisation domain
APAR_RS00850	PF05378	Hydantoinase/oxoprolinase N-terminal region
APAR_RS00850	PF01968	Hydantoinase/oxoprolinase
APAR_RS00860	PF01266	FAD dependent oxidoreductase
APAR_RS00875	PF03725	3' exoribonuclease family, domain 2
APAR_RS00875	PF01138	3' exoribonuclease family, domain 1
APAR_RS00880	PF01725	Ham1 family
APAR_RS00885	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
APAR_RS00890	PF06257	Biofilm formation stimulator VEG
APAR_RS00895	PF00288	GHMP kinases N terminal domain
APAR_RS00895	PF08544	GHMP kinases C terminal 
APAR_RS00905	PF03611	PTS system sugar-specific permease component
APAR_RS00915	PF00456	Transketolase, thiamine diphosphate binding domain
APAR_RS00920	PF02780	Transketolase, C-terminal domain
APAR_RS00920	PF02779	Transketolase, pyrimidine binding domain
APAR_RS00925	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
APAR_RS00925	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
APAR_RS00960	PF00814	Glycoprotease family
APAR_RS00965	PF02540	NAD synthase
APAR_RS00965	PF00795	Carbon-nitrogen hydrolase
APAR_RS00970	PF00166	Chaperonin 10 Kd subunit
APAR_RS00975	PF00118	TCP-1/cpn60 chaperonin family
APAR_RS00985	PF01926	50S ribosome-binding GTPase
APAR_RS00985	PF06071	Protein of unknown function (DUF933)
APAR_RS00990	PF03816	Cell envelope-related transcriptional attenuator domain
APAR_RS00995	PF05737	Collagen binding domain
APAR_RS00995	PF17961	Bacterial Ig domain
APAR_RS00995	PF01476	LysM domain
APAR_RS01000	PF02540	NAD synthase
APAR_RS01000	PF00958	GMP synthase C terminal domain
APAR_RS01000	PF00117	Glutamine amidotransferase class-I
APAR_RS01015	PF08774	VRR-NUC domain
APAR_RS01015	PF04851	Type III restriction enzyme, res subunit
APAR_RS01040	PF02899	Phage integrase, N-terminal SAM-like domain
APAR_RS01040	PF00589	Phage integrase family
APAR_RS01055	PF02384	N-6 DNA Methylase
APAR_RS01055	PF12161	HsdM N-terminal domain
APAR_RS01095	PF12728	Helix-turn-helix domain
APAR_RS01095	PF02661	Fic/DOC family
APAR_RS01100	PF01380	SIS domain
APAR_RS01115	PF12848	ABC transporter
APAR_RS01115	PF00005	ABC transporter
APAR_RS01145	PF00005	ABC transporter
APAR_RS01150	PF03575	Peptidase family S51
APAR_RS01175	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ 
APAR_RS01180	PF02082	Transcriptional regulator
APAR_RS01190	PF00857	Isochorismatase family
APAR_RS01205	PF00005	ABC transporter
APAR_RS01210	PF12704	MacB-like periplasmic core domain
APAR_RS01210	PF02687	FtsX-like permease family
APAR_RS01210	PF00005	ABC transporter
APAR_RS01225	PF01546	Peptidase family M20/M25/M40
APAR_RS01225	PF07687	Peptidase dimerisation domain
APAR_RS01230	PF00860	Permease family
APAR_RS01240	PF01979	Amidohydrolase family
APAR_RS01245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APAR_RS01245	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
APAR_RS01250	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APAR_RS01250	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
APAR_RS01250	PF01799	[2Fe-2S] binding domain
APAR_RS01250	PF00111	2Fe-2S iron-sulfur cluster binding domain
APAR_RS01255	PF00291	Pyridoxal-phosphate dependent enzyme
APAR_RS01260	PF01546	Peptidase family M20/M25/M40
APAR_RS01260	PF07687	Peptidase dimerisation domain
APAR_RS01265	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
APAR_RS01265	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
APAR_RS01270	PF00696	Amino acid kinase family
APAR_RS01275	PF02542	YgbB family
APAR_RS01275	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
APAR_RS01280	PF00449	Urease alpha-subunit, N-terminal domain
APAR_RS01280	PF01979	Amidohydrolase family
APAR_RS01285	PF01042	Endoribonuclease L-PSP
APAR_RS01305	PF00266	Aminotransferase class-V
APAR_RS01315	PF02625	XdhC and CoxI family
APAR_RS01315	PF13478	XdhC Rossmann domain
APAR_RS01320	PF02769	AIR synthase related protein, C-terminal domain
APAR_RS01320	PF00586	AIR synthase related protein, N-terminal domain
APAR_RS01325	PF02625	XdhC and CoxI family
APAR_RS01325	PF13478	XdhC Rossmann domain
APAR_RS01335	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS01340	PF00005	ABC transporter
APAR_RS01345	PF06463	Molybdenum Cofactor Synthesis C
APAR_RS01345	PF04055	Radical SAM superfamily
APAR_RS01350	PF01967	MoaC family
APAR_RS01365	PF00994	Probable molybdopterin binding domain
APAR_RS01370	PF03358	NADPH-dependent FMN reductase
APAR_RS01370	PF00890	FAD binding domain
APAR_RS01370	PF04205	FMN-binding domain
APAR_RS01375	PF03358	NADPH-dependent FMN reductase
APAR_RS01375	PF00890	FAD binding domain
APAR_RS01375	PF04205	FMN-binding domain
APAR_RS01380	PF02424	ApbE family
APAR_RS01395	PF01966	HD domain
APAR_RS01400	PF01717	Cobalamin-independent synthase, Catalytic domain
APAR_RS01420	PF00005	ABC transporter
APAR_RS01420	PF00664	ABC transporter transmembrane region
APAR_RS01425	PF00664	ABC transporter transmembrane region
APAR_RS01425	PF00005	ABC transporter
APAR_RS01455	PF00950	ABC 3 transport family
APAR_RS01460	PF00005	ABC transporter
APAR_RS01465	PF01297	Zinc-uptake complex component A periplasmic
APAR_RS01470	PF00106	short chain dehydrogenase
APAR_RS01475	PF03812	2-keto-3-deoxygluconate permease
APAR_RS01500	PF03009	Glycerophosphoryl diester phosphodiesterase family
APAR_RS01505	PF00403	Heavy-metal-associated domain
APAR_RS01510	PF02390	Putative methyltransferase 
APAR_RS01520	PF01979	Amidohydrolase family
APAR_RS01525	PF02492	CobW/HypB/UreG, nucleotide-binding domain
APAR_RS01525	PF07683	Cobalamin synthesis protein cobW C-terminal domain
APAR_RS01530	PF02146	Sir2 family
APAR_RS01535	PF02833	DHHA2 domain
APAR_RS01535	PF01368	DHH family
APAR_RS01535	PF07085	DRTGG domain
APAR_RS01535	PF00571	CBS domain
APAR_RS01545	PF01757	Acyltransferase family
APAR_RS01555	PF12848	ABC transporter
APAR_RS01555	PF00005	ABC transporter
APAR_RS01560	PF00210	Ferritin-like domain
APAR_RS01570	PF00710	Asparaginase, N-terminal
APAR_RS01570	PF17763	Glutaminase/Asparaginase C-terminal domain
APAR_RS01585	PF08903	Domain of unknown function (DUF1846)
APAR_RS01615	PF00440	Bacterial regulatory proteins, tetR family
APAR_RS01615	PF08361	MAATS-type transcriptional repressor, C-terminal region
APAR_RS01625	PF01238	Phosphomannose isomerase type I
APAR_RS01635	PF01741	Large-conductance mechanosensitive channel, MscL
APAR_RS01640	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
APAR_RS01645	PF00155	Aminotransferase class I and II
APAR_RS01650	PF07478	D-ala D-ala ligase C-terminus
APAR_RS01650	PF01820	D-ala D-ala ligase N-terminus
APAR_RS01655	PF00480	ROK family
APAR_RS01660	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS01660	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APAR_RS01670	PF01709	Transcriptional regulator
APAR_RS01675	PF00455	DeoR C terminal sensor domain
APAR_RS01675	PF08220	DeoR-like helix-turn-helix domain
APAR_RS01685	PF03611	PTS system sugar-specific permease component
APAR_RS01705	PF00596	Class II Aldolase and Adducin N-terminal domain
APAR_RS01710	PF01261	Xylose isomerase-like TIM barrel
APAR_RS01715	PF00923	Transaldolase/Fructose-6-phosphate aldolase
APAR_RS01720	PF00456	Transketolase, thiamine diphosphate binding domain
APAR_RS01725	PF02780	Transketolase, C-terminal domain
APAR_RS01725	PF02779	Transketolase, pyrimidine binding domain
APAR_RS01735	PF00005	ABC transporter
APAR_RS01735	PF00664	ABC transporter transmembrane region
APAR_RS01740	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APAR_RS01740	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
APAR_RS01740	PF13247	4Fe-4S dicluster domain
APAR_RS01745	PF00175	Oxidoreductase NAD-binding domain 
APAR_RS01745	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
APAR_RS01745	PF00970	Oxidoreductase FAD-binding domain
APAR_RS01750	PF01195	Peptidyl-tRNA hydrolase
APAR_RS01755	PF01470	Pyroglutamyl peptidase
APAR_RS01765	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
APAR_RS01765	PF14572	Phosphoribosyl synthetase-associated domain
APAR_RS01770	PF00132	Bacterial transferase hexapeptide (six repeats)
APAR_RS01770	PF00483	Nucleotidyl transferase
APAR_RS01780	PF01471	Putative peptidoglycan binding domain
APAR_RS01780	PF07486	Cell Wall Hydrolase
APAR_RS01785	PF00348	Polyprenyl synthetase
APAR_RS01790	PF16363	GDP-mannose 4,6 dehydratase
APAR_RS01800	PF00005	ABC transporter
APAR_RS01800	PF02687	FtsX-like permease family
APAR_RS01800	PF12704	MacB-like periplasmic core domain
APAR_RS01815	PF00586	AIR synthase related protein, N-terminal domain
APAR_RS01815	PF02769	AIR synthase related protein, C-terminal domain
APAR_RS01815	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
APAR_RS01820	PF00005	ABC transporter
APAR_RS01820	PF02361	Cobalt transport protein
APAR_RS01825	PF00005	ABC transporter
APAR_RS01825	PF02361	Cobalt transport protein
APAR_RS01840	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
APAR_RS01840	PF01565	FAD binding domain 
APAR_RS01845	PF00365	Phosphofructokinase
APAR_RS01850	PF00365	Phosphofructokinase
APAR_RS01855	PF03952	Enolase, N-terminal domain
APAR_RS01855	PF00113	Enolase, C-terminal TIM barrel domain
APAR_RS01865	PF13538	UvrD-like helicase C-terminal domain
APAR_RS01870	PF01926	50S ribosome-binding GTPase
APAR_RS01880	PF00005	ABC transporter
APAR_RS01905	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APAR_RS01905	PF03466	LysR substrate binding domain
APAR_RS01910	PF00156	Phosphoribosyl transferase domain
APAR_RS01915	PF00152	tRNA synthetases class II (D, K and N) 
APAR_RS01915	PF01336	OB-fold nucleic acid binding domain
APAR_RS01925	PF01053	Cys/Met metabolism PLP-dependent enzyme
APAR_RS01940	PF01546	Peptidase family M20/M25/M40
APAR_RS01950	PF00005	ABC transporter
APAR_RS01950	PF02687	FtsX-like permease family
APAR_RS01950	PF12704	MacB-like periplasmic core domain
APAR_RS01955	PF00675	Insulinase (Peptidase family M16)
APAR_RS01955	PF08367	Peptidase M16C associated
APAR_RS01955	PF05193	Peptidase M16 inactive domain
APAR_RS01960	PF00892	EamA-like transporter family
APAR_RS01970	PF02673	Bacitracin resistance protein BacA
APAR_RS01975	PF00580	UvrD/REP helicase N-terminal domain
APAR_RS01975	PF13361	UvrD-like helicase C-terminal domain
APAR_RS01985	PF01048	Phosphorylase superfamily
APAR_RS01990	PF01384	Phosphate transporter family
APAR_RS02020	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS02030	PF00005	ABC transporter
APAR_RS02035	PF02127	Aminopeptidase I zinc metalloprotease (M18)
APAR_RS02045	PF01116	Fructose-bisphosphate aldolase class-II
APAR_RS02050	PF02082	Transcriptional regulator
APAR_RS02055	PF01592	NifU-like N terminal domain
APAR_RS02060	PF00266	Aminotransferase class-V
APAR_RS02070	PF01458	Uncharacterized protein family (UPF0051)
APAR_RS02075	PF00005	ABC transporter
APAR_RS02080	PF03129	Anticodon binding domain
APAR_RS02080	PF13393	Histidyl-tRNA synthetase
APAR_RS02100	PF12704	MacB-like periplasmic core domain
APAR_RS02100	PF02687	FtsX-like permease family
APAR_RS02100	PF00005	ABC transporter
APAR_RS02105	PF03553	Na+/H+ antiporter family
APAR_RS02110	PF03466	LysR substrate binding domain
APAR_RS02110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APAR_RS02115	PF00849	RNA pseudouridylate synthase
APAR_RS02130	PF18652	Adhesin P1 N-terminal domain
APAR_RS02130	PF06696	Streptococcal surface antigen repeat
APAR_RS02130	PF00746	LPXTG cell wall anchor motif
APAR_RS02130	PF08363	Glucan-binding protein C
APAR_RS02130	PF16364	Cell surface antigen C-terminus
APAR_RS02130	PF17998	Cell surface antigen I/II C2 terminal domain
APAR_RS02135	PF13419	Haloacid dehalogenase-like hydrolase
APAR_RS02160	PF00005	ABC transporter
APAR_RS02160	PF09383	NIL domain
APAR_RS02170	PF00152	tRNA synthetases class II (D, K and N) 
APAR_RS02170	PF01336	OB-fold nucleic acid binding domain
APAR_RS02170	PF02938	GAD domain
APAR_RS02175	PF00005	ABC transporter
APAR_RS02175	PF00664	ABC transporter transmembrane region
APAR_RS02180	PF00664	ABC transporter transmembrane region
APAR_RS02180	PF00005	ABC transporter
APAR_RS02185	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
APAR_RS02190	PF06445	GyrI-like small molecule binding domain
APAR_RS02190	PF12833	Helix-turn-helix domain
APAR_RS02195	PF07690	Major Facilitator Superfamily
APAR_RS02200	PF00300	Histidine phosphatase superfamily (branch 1)
APAR_RS02210	PF03951	Glutamine synthetase, beta-Grasp domain
APAR_RS02210	PF00120	Glutamine synthetase, catalytic domain
APAR_RS02215	PF00497	Bacterial extracellular solute-binding proteins, family 3
APAR_RS02220	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS02225	PF00005	ABC transporter
APAR_RS02230	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS02235	PF13180	PDZ domain
APAR_RS02240	PF02646	RmuC family
APAR_RS02245	PF00005	ABC transporter
APAR_RS02255	PF02583	Metal-sensitive transcriptional repressor
APAR_RS02260	PF00403	Heavy-metal-associated domain
APAR_RS02265	PF00962	Adenosine/AMP deaminase
APAR_RS02270	PF03747	ADP-ribosylglycohydrolase
APAR_RS02280	PF00149	Calcineurin-like phosphoesterase
APAR_RS02290	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS02295	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS02300	PF00005	ABC transporter
APAR_RS02305	PF00497	Bacterial extracellular solute-binding proteins, family 3
APAR_RS02310	PF03812	2-keto-3-deoxygluconate permease
APAR_RS02320	PF01966	HD domain
APAR_RS02320	PF13286	Phosphohydrolase-associated domain
APAR_RS02325	PF16193	AAA C-terminal domain
APAR_RS02325	PF00004	ATPase family associated with various cellular activities (AAA)
APAR_RS02325	PF12002	MgsA AAA+ ATPase C terminal
APAR_RS02340	PF04542	Sigma-70 region 2 
APAR_RS02340	PF04539	Sigma-70 region 3
APAR_RS02340	PF04545	Sigma-70, region 4
APAR_RS02350	PF02272	DHHA1 domain
APAR_RS02350	PF01411	tRNA synthetases class II (A)
APAR_RS02350	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
APAR_RS02355	PF03652	Holliday junction resolvase
APAR_RS02360	PF02618	YceG-like family
APAR_RS02370	PF01202	Shikimate kinase
APAR_RS02380	PF00557	Metallopeptidase family M24
APAR_RS02380	PF01321	Creatinase/Prolidase N-terminal domain
APAR_RS02385	PF03610	PTS system fructose IIA component
APAR_RS02385	PF03830	PTS system sorbose subfamily IIB component
APAR_RS02390	PF03609	PTS system sorbose-specific iic component
APAR_RS02395	PF03613	PTS system mannose/fructose/sorbose family IID component
APAR_RS02405	PF09285	Elongation factor P, C-terminal
APAR_RS02405	PF08207	Elongation factor P (EF-P) KOW-like domain
APAR_RS02405	PF01132	Elongation factor P (EF-P) OB domain
APAR_RS02415	PF01029	NusB family
APAR_RS02425	PF01479	S4 domain
APAR_RS02425	PF01728	FtsJ-like methyltransferase
APAR_RS02430	PF01513	ATP-NAD kinase
APAR_RS02435	PF02463	RecF/RecN/SMC N terminal domain
APAR_RS02440	PF00117	Glutamine amidotransferase class-I
APAR_RS02440	PF06418	CTP synthase N-terminus
APAR_RS02445	PF00589	Phage integrase family
APAR_RS02445	PF02899	Phage integrase, N-terminal SAM-like domain
APAR_RS02450	PF02381	MraZ protein, putative antitoxin-like
APAR_RS02455	PF01795	MraW methylase family
APAR_RS02465	PF00905	Penicillin binding protein transpeptidase domain
APAR_RS02465	PF03717	Penicillin-binding Protein dimerisation domain
APAR_RS02470	PF01225	Mur ligase family, catalytic domain
APAR_RS02470	PF02875	Mur ligase family, glutamate ligase domain
APAR_RS02470	PF08245	Mur ligase middle domain
APAR_RS02475	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
APAR_RS02475	PF00953	Glycosyl transferase family 4
APAR_RS02480	PF02875	Mur ligase family, glutamate ligase domain
APAR_RS02480	PF08245	Mur ligase middle domain
APAR_RS02485	PF01098	Cell cycle protein
APAR_RS02490	PF03033	Glycosyltransferase family 28 N-terminal domain
APAR_RS02490	PF04101	Glycosyltransferase family 28 C-terminal domain
APAR_RS02495	PF01225	Mur ligase family, catalytic domain
APAR_RS02495	PF02875	Mur ligase family, glutamate ligase domain
APAR_RS02495	PF08245	Mur ligase middle domain
APAR_RS02500	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
APAR_RS02500	PF01565	FAD binding domain 
APAR_RS02505	PF08478	POTRA domain, FtsQ-type
APAR_RS02505	PF03799	Cell division protein FtsQ
APAR_RS02510	PF00091	Tubulin/FtsZ family, GTPase domain
APAR_RS02510	PF12327	FtsZ family, C-terminal domain
APAR_RS02520	PF01168	Alanine racemase, N-terminal domain
APAR_RS02525	PF04472	Cell division protein SepF
APAR_RS02530	PF02325	YGGT family
APAR_RS02550	PF12627	Probable RNA and SrmB- binding site of polymerase A
APAR_RS02550	PF01743	Poly A polymerase head domain
APAR_RS02550	PF13735	tRNA nucleotidyltransferase domain 2 putative
APAR_RS02560	PF01061	ABC-2 type transporter
APAR_RS02570	PF02773	S-adenosylmethionine synthetase, C-terminal domain
APAR_RS02570	PF00438	S-adenosylmethionine synthetase, N-terminal domain
APAR_RS02570	PF02772	S-adenosylmethionine synthetase, central domain
APAR_RS02590	PF03313	Serine dehydratase alpha chain
APAR_RS02595	PF00749	tRNA synthetases class I (E and Q), catalytic domain
APAR_RS02605	PF02127	Aminopeptidase I zinc metalloprotease (M18)
APAR_RS02615	PF00005	ABC transporter
APAR_RS02615	PF00664	ABC transporter transmembrane region
APAR_RS02640	PF00155	Aminotransferase class I and II
APAR_RS02645	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
APAR_RS02645	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
APAR_RS02650	PF00701	Dihydrodipicolinate synthetase family
APAR_RS02655	PF01113	Dihydrodipicolinate reductase, N-terminus
APAR_RS02655	PF05173	Dihydrodipicolinate reductase, C-terminus
APAR_RS02660	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
APAR_RS02660	PF00132	Bacterial transferase hexapeptide (six repeats)
APAR_RS02660	PF14602	Hexapeptide repeat of succinyl-transferase
APAR_RS02665	PF01702	Queuine tRNA-ribosyltransferase
APAR_RS02670	PF02272	DHHA1 domain
APAR_RS02670	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
APAR_RS02670	PF17768	RecJ OB domain
APAR_RS02670	PF01368	DHH family
APAR_RS02675	PF02824	TGS domain
APAR_RS02675	PF04607	Region found in RelA / SpoT proteins
APAR_RS02675	PF13291	ACT domain
APAR_RS02680	PF00753	Metallo-beta-lactamase superfamily
APAR_RS02690	PF05198	Translation initiation factor IF-3, N-terminal domain
APAR_RS02690	PF00707	Translation initiation factor IF-3, C-terminal domain
APAR_RS02695	PF01632	Ribosomal protein L35
APAR_RS02700	PF00453	Ribosomal protein L20
APAR_RS02705	PF00953	Glycosyl transferase family 4
APAR_RS02725	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
APAR_RS02725	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
APAR_RS02725	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
APAR_RS02730	PF03485	Arginyl tRNA synthetase N terminal domain
APAR_RS02730	PF05746	DALR anticodon binding domain
APAR_RS02730	PF00750	tRNA synthetases class I (R)
APAR_RS02740	PF07497	Rho termination factor, RNA-binding domain
APAR_RS02740	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APAR_RS02740	PF07498	Rho termination factor, N-terminal domain
APAR_RS02755	PF02653	Branched-chain amino acid transport system / permease component
APAR_RS02760	PF11862	Domain of unknown function (DUF3382)
APAR_RS02760	PF02653	Branched-chain amino acid transport system / permease component
APAR_RS02765	PF00005	ABC transporter
APAR_RS02765	PF12399	Branched-chain amino acid ATP-binding cassette transporter
APAR_RS02770	PF00005	ABC transporter
APAR_RS02775	PF00288	GHMP kinases N terminal domain
APAR_RS02775	PF08544	GHMP kinases C terminal 
APAR_RS02780	PF00291	Pyridoxal-phosphate dependent enzyme
APAR_RS02780	PF14821	Threonine synthase N terminus
APAR_RS02785	PF00742	Homoserine dehydrogenase
APAR_RS02785	PF03447	Homoserine dehydrogenase, NAD binding domain
APAR_RS02790	PF00696	Amino acid kinase family
APAR_RS02790	PF13840	ACT domain 
APAR_RS02795	PF02774	Semialdehyde dehydrogenase, dimerisation domain
APAR_RS02795	PF01118	Semialdehyde dehydrogenase, NAD binding domain
APAR_RS02815	PF00589	Phage integrase family
APAR_RS02815	PF13495	Phage integrase, N-terminal SAM-like domain
APAR_RS02840	PF00717	Peptidase S24-like
APAR_RS02840	PF01726	LexA DNA binding domain
APAR_RS02910	PF14659	Phage integrase, N-terminal SAM-like domain
APAR_RS02910	PF00589	Phage integrase family
APAR_RS02925	PF00436	Single-strand binding protein family
APAR_RS03065	PF00155	Aminotransferase class I and II
APAR_RS03080	PF00294	pfkB family carbohydrate kinase
APAR_RS03085	PF00391	PEP-utilising enzyme, mobile domain
APAR_RS03085	PF02896	PEP-utilising enzyme, TIM barrel domain
APAR_RS03085	PF05524	PEP-utilising enzyme, N-terminal
APAR_RS03090	PF00781	Diacylglycerol kinase catalytic domain
APAR_RS03110	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS03115	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS03120	PF17912	MalK OB fold domain
APAR_RS03120	PF00005	ABC transporter
APAR_RS03120	PF03459	TOBE domain
APAR_RS03125	PF02446	4-alpha-glucanotransferase
APAR_RS03130	PF00343	Carbohydrate phosphorylase
APAR_RS03145	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
APAR_RS03145	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
APAR_RS03150	PF02245	Methylpurine-DNA glycosylase (MPG)
APAR_RS03155	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
APAR_RS03155	PF00117	Glutamine amidotransferase class-I
APAR_RS03160	PF02142	MGS-like domain
APAR_RS03160	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APAR_RS03160	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
APAR_RS03170	PF05697	Bacterial trigger factor protein (TF)
APAR_RS03170	PF05698	Bacterial trigger factor protein (TF) C-terminus
APAR_RS03170	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APAR_RS03175	PF00574	Clp protease
APAR_RS03180	PF06689	ClpX C4-type zinc finger
APAR_RS03180	PF10431	C-terminal, D2-small domain, of ClpB protein 
APAR_RS03180	PF07724	AAA domain (Cdc48 subfamily)
APAR_RS03195	PF00899	ThiF family
APAR_RS03200	PF08264	Anticodon-binding domain of tRNA
APAR_RS03200	PF00133	tRNA synthetases class I (I, L, M and V)
APAR_RS03200	PF10458	Valyl tRNA synthetase tRNA binding arm
APAR_RS03205	PF01268	Formate--tetrahydrofolate ligase
APAR_RS03215	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
APAR_RS03215	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
APAR_RS03220	PF01227	GTP cyclohydrolase I
APAR_RS03225	PF08245	Mur ligase middle domain
APAR_RS03225	PF02875	Mur ligase family, glutamate ligase domain
APAR_RS03235	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APAR_RS03235	PF03129	Anticodon binding domain
APAR_RS03235	PF02824	TGS domain
APAR_RS03235	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
APAR_RS03240	PF01053	Cys/Met metabolism PLP-dependent enzyme
APAR_RS03245	PF00171	Aldehyde dehydrogenase family
APAR_RS03245	PF00465	Iron-containing alcohol dehydrogenase 
APAR_RS03255	PF00186	Dihydrofolate reductase
APAR_RS03260	PF00303	Thymidylate synthase
APAR_RS03270	PF00293	NUDIX domain
APAR_RS03290	PF00781	Diacylglycerol kinase catalytic domain
APAR_RS03295	PF01612	3'-5' exonuclease
APAR_RS03295	PF00570	HRDC domain
APAR_RS03300	PF04298	Putative neutral zinc metallopeptidase
APAR_RS03305	PF02601	Exonuclease VII, large subunit
APAR_RS03305	PF13742	OB-fold nucleic acid binding domain
APAR_RS03310	PF02609	Exonuclease VII small subunit
APAR_RS03315	PF01230	HIT domain
APAR_RS03320	PF00871	Acetokinase family
APAR_RS03330	PF01515	Phosphate acetyl/butaryl transferase
APAR_RS03335	PF03275	UDP-galactopyranose mutase
APAR_RS03340	PF00535	Glycosyl transferase family 2
APAR_RS03345	PF02545	Maf-like protein
APAR_RS03355	PF01938	TRAM domain
APAR_RS03355	PF05958	tRNA (Uracil-5-)-methyltransferase
APAR_RS03360	PF00579	tRNA synthetases class I (W and Y)
APAR_RS03365	PF04055	Radical SAM superfamily
APAR_RS03370	PF01228	Glycine radical
APAR_RS03370	PF02901	Pyruvate formate lyase-like
APAR_RS03375	PF02901	Pyruvate formate lyase-like
APAR_RS03375	PF01228	Glycine radical
APAR_RS03380	PF01812	5-formyltetrahydrofolate cyclo-ligase family
APAR_RS03385	PF01220	Dehydroquinase class II
APAR_RS03390	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
APAR_RS03390	PF01488	Shikimate / quinate 5-dehydrogenase
APAR_RS03390	PF08501	Shikimate dehydrogenase substrate binding domain
APAR_RS03400	PF01264	Chorismate synthase
APAR_RS03405	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
APAR_RS03410	PF02581	Thiamine monophosphate synthase
APAR_RS03415	PF01761	3-dehydroquinate synthase
APAR_RS03435	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
APAR_RS03450	PF04085	rod shape-determining protein MreC
APAR_RS03460	PF00905	Penicillin binding protein transpeptidase domain
APAR_RS03460	PF03717	Penicillin-binding Protein dimerisation domain
APAR_RS03465	PF01098	Cell cycle protein
APAR_RS03485	PF00829	Ribosomal prokaryotic L21 protein
APAR_RS03490	PF01016	Ribosomal L27 protein
APAR_RS03500	PF00005	ABC transporter
APAR_RS03505	PF02361	Cobalt transport protein
APAR_RS03510	PF09269	Domain of unknown function (DUF1967)
APAR_RS03510	PF01018	GTP1/OBG
APAR_RS03510	PF01926	50S ribosome-binding GTPase
APAR_RS03515	PF01467	Cytidylyltransferase-like
APAR_RS03520	PF01966	HD domain
APAR_RS03530	PF11799	impB/mucB/samB family C-terminal domain
APAR_RS03530	PF00817	impB/mucB/samB family
APAR_RS03530	PF11798	IMS family HHH motif
APAR_RS03535	PF00886	Ribosomal protein S16
APAR_RS03545	PF05239	PRC-barrel domain
APAR_RS03545	PF01782	RimM N-terminal domain
APAR_RS03550	PF01746	tRNA (Guanine-1)-methyltransferase
APAR_RS03555	PF10502	Signal peptidase, peptidase S26 
APAR_RS03560	PF02091	Glycyl-tRNA synthetase alpha subunit
APAR_RS03565	PF05746	DALR anticodon binding domain
APAR_RS03565	PF02092	Glycyl-tRNA synthetase beta subunit
APAR_RS03570	PF03618	Kinase/pyrophosphorylase
APAR_RS03575	PF00391	PEP-utilising enzyme, mobile domain
APAR_RS03575	PF02896	PEP-utilising enzyme, TIM barrel domain
APAR_RS03575	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
APAR_RS03580	PF13286	Phosphohydrolase-associated domain
APAR_RS03580	PF01966	HD domain
APAR_RS03585	PF01245	Ribosomal protein L19
APAR_RS03590	PF01351	Ribonuclease HII
APAR_RS03595	PF02021	Uncharacterised protein family UPF0102
APAR_RS03600	PF13335	Magnesium chelatase, subunit ChlI C-terminal
APAR_RS03600	PF01078	Magnesium chelatase, subunit ChlI
APAR_RS03610	PF01134	Glucose inhibited division protein A
APAR_RS03615	PF02899	Phage integrase, N-terminal SAM-like domain
APAR_RS03615	PF00589	Phage integrase family
APAR_RS03620	PF00318	Ribosomal protein S2
APAR_RS03625	PF00889	Elongation factor TS
APAR_RS03630	PF00696	Amino acid kinase family
APAR_RS03635	PF01765	Ribosome recycling factor
APAR_RS03640	PF01255	Putative undecaprenyl diphosphate synthase
APAR_RS03650	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
APAR_RS03650	PF13288	DXP reductoisomerase C-terminal domain
APAR_RS03650	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
APAR_RS03655	PF02163	Peptidase family M50
APAR_RS03655	PF17820	PDZ domain
APAR_RS03660	PF04551	GcpE protein
APAR_RS03665	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APAR_RS03665	PF04073	Aminoacyl-tRNA editing domain
APAR_RS03665	PF03129	Anticodon binding domain
APAR_RS03670	PF02535	ZIP Zinc transporter
APAR_RS03705	PF00005	ABC transporter
APAR_RS03705	PF12848	ABC transporter
APAR_RS03710	PF02163	Peptidase family M50
APAR_RS03715	PF02616	Segregation and condensation protein ScpA
APAR_RS03720	PF04079	Segregation and condensation complex subunit ScpB
APAR_RS03725	PF00849	RNA pseudouridylate synthase
APAR_RS03725	PF01479	S4 domain
APAR_RS03730	PF00300	Histidine phosphatase superfamily (branch 1)
APAR_RS03735	PF02224	Cytidylate kinase
APAR_RS03740	PF02401	LytB protein
APAR_RS03750	PF01926	50S ribosome-binding GTPase
APAR_RS03750	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
APAR_RS03755	PF02660	Glycerol-3-phosphate acyltransferase
APAR_RS03760	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
APAR_RS03760	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
APAR_RS03765	PF00834	Ribulose-phosphate 3 epimerase family
APAR_RS03770	PF00266	Aminotransferase class-V
APAR_RS03780	PF02441	Flavoprotein
APAR_RS03780	PF04127	DNA / pantothenate metabolism flavoprotein
APAR_RS03785	PF01261	Xylose isomerase-like TIM barrel
APAR_RS03790	PF00005	ABC transporter
APAR_RS03790	PF16326	ABC transporter C-terminal domain
APAR_RS03790	PF12848	ABC transporter
APAR_RS03795	PF00664	ABC transporter transmembrane region
APAR_RS03795	PF00005	ABC transporter
APAR_RS03800	PF00664	ABC transporter transmembrane region
APAR_RS03800	PF00005	ABC transporter
APAR_RS03810	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
APAR_RS03815	PF01641	SelR domain
APAR_RS03815	PF01625	Peptide methionine sulfoxide reductase
APAR_RS03825	PF03063	Prismane/CO dehydrogenase family
APAR_RS03830	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APAR_RS03830	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
APAR_RS03835	PF13649	Methyltransferase domain
APAR_RS03840	PF06100	MCRA family
APAR_RS03845	PF08241	Methyltransferase domain
APAR_RS03855	PF07687	Peptidase dimerisation domain
APAR_RS03855	PF01546	Peptidase family M20/M25/M40
APAR_RS03860	PF01066	CDP-alcohol phosphatidyltransferase
APAR_RS03865	PF07943	Penicillin-binding protein 5, C-terminal domain
APAR_RS03865	PF00768	D-alanyl-D-alanine carboxypeptidase
APAR_RS03875	PF01042	Endoribonuclease L-PSP
APAR_RS03885	PF00376	MerR family regulatory protein
APAR_RS03890	PF00156	Phosphoribosyl transferase domain
APAR_RS03900	PF00654	Voltage gated chloride channel
APAR_RS03905	PF08241	Methyltransferase domain
APAR_RS03910	PF13673	Acetyltransferase (GNAT) domain
APAR_RS03910	PF04229	GrpB protein
APAR_RS03915	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
APAR_RS03920	PF01209	ubiE/COQ5 methyltransferase family
APAR_RS03940	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APAR_RS03945	PF00860	Permease family
APAR_RS03950	PF00692	dUTPase
APAR_RS03955	PF03477	ATP cone domain
APAR_RS03965	PF01726	LexA DNA binding domain
APAR_RS03965	PF00717	Peptidase S24-like
APAR_RS03975	PF16360	GTP-binding GTPase Middle Region
APAR_RS03975	PF13167	GTP-binding GTPase N-terminal
APAR_RS03975	PF01926	50S ribosome-binding GTPase
APAR_RS03985	PF00919	Uncharacterized protein family UPF0004
APAR_RS03985	PF04055	Radical SAM superfamily
APAR_RS03990	PF04232	Stage V sporulation protein S (SpoVS)
APAR_RS03995	PF08676	MutL C terminal dimerisation domain
APAR_RS03995	PF01119	DNA mismatch repair protein, C-terminal domain
APAR_RS04000	PF01966	HD domain
APAR_RS04000	PF00013	KH domain
APAR_RS04000	PF12072	Domain of unknown function (DUF3552)
APAR_RS04005	PF02631	RecX family
APAR_RS04010	PF00154	recA bacterial DNA recombination protein
APAR_RS04015	PF02464	Competence-damaged protein
APAR_RS04015	PF18146	Damage-inducible protein CinA KH domain
APAR_RS04015	PF00994	Probable molybdopterin binding domain
APAR_RS04020	PF01066	CDP-alcohol phosphatidyltransferase
APAR_RS04025	PF04055	Radical SAM superfamily
APAR_RS04025	PF18693	TRAM domain
APAR_RS04025	PF00919	Uncharacterized protein family UPF0004
APAR_RS04030	PF04461	Protein of unknown function (DUF520)
APAR_RS04040	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
APAR_RS04040	PF17854	FtsK alpha domain
APAR_RS04040	PF09397	Ftsk gamma domain
APAR_RS04040	PF01580	FtsK/SpoIIIE family
APAR_RS04045	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
APAR_RS04045	PF17770	Ribonuclease J C-terminal domain
APAR_RS04045	PF00753	Metallo-beta-lactamase superfamily
APAR_RS04050	PF00013	KH domain
APAR_RS04050	PF00575	S1 RNA binding domain
APAR_RS04050	PF03725	3' exoribonuclease family, domain 2
APAR_RS04050	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
APAR_RS04050	PF01138	3' exoribonuclease family, domain 1
APAR_RS04055	PF00312	Ribosomal protein S15
APAR_RS04060	PF11967	Recombination protein O N terminal
APAR_RS04060	PF02565	Recombination protein O C terminal
APAR_RS04065	PF01926	50S ribosome-binding GTPase
APAR_RS04065	PF07650	KH domain
APAR_RS04070	PF01219	Prokaryotic diacylglycerol kinase
APAR_RS04075	PF02130	Uncharacterized protein family UPF0054
APAR_RS04080	PF02562	PhoH-like protein
APAR_RS04085	PF04055	Radical SAM superfamily
APAR_RS04085	PF00919	Uncharacterized protein family UPF0004
APAR_RS04090	PF00684	DnaJ central domain
APAR_RS04090	PF01556	DnaJ C terminal domain
APAR_RS04090	PF00226	DnaJ domain
APAR_RS04095	PF00684	DnaJ central domain
APAR_RS04095	PF00226	DnaJ domain
APAR_RS04095	PF01556	DnaJ C terminal domain
APAR_RS04105	PF04055	Radical SAM superfamily
APAR_RS04105	PF06969	HemN C-terminal domain
APAR_RS04110	PF01207	Dihydrouridine synthase (Dus)
APAR_RS04115	PF00679	Elongation factor G C-terminus
APAR_RS04115	PF00009	Elongation factor Tu GTP binding domain
APAR_RS04115	PF03144	Elongation factor Tu domain 2
APAR_RS04115	PF06421	GTP-binding protein LepA C-terminus
APAR_RS04120	PF01649	Ribosomal protein S20
APAR_RS04130	PF00753	Metallo-beta-lactamase superfamily
APAR_RS04130	PF03772	Competence protein
APAR_RS04130	PF13567	Domain of unknown function (DUF4131)
APAR_RS04140	PF02568	Thiamine biosynthesis protein (ThiI)
APAR_RS04140	PF02926	THUMP domain
APAR_RS04150	PF00625	Guanylate kinase
APAR_RS04160	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
APAR_RS04165	PF01180	Dihydroorotate dehydrogenase
APAR_RS04170	PF00175	Oxidoreductase NAD-binding domain 
APAR_RS04170	PF00970	Oxidoreductase FAD-binding domain
APAR_RS04170	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
APAR_RS04175	PF01979	Amidohydrolase family
APAR_RS04180	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
APAR_RS04180	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
APAR_RS04185	PF00156	Phosphoribosyl transferase domain
APAR_RS04190	PF00005	ABC transporter
APAR_RS04195	PF00356	Bacterial regulatory proteins, lacI family
APAR_RS04200	PF01263	Aldose 1-epimerase
APAR_RS04210	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
APAR_RS04210	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
APAR_RS04215	PF02653	Branched-chain amino acid transport system / permease component
APAR_RS04220	PF00005	ABC transporter
APAR_RS04225	PF18610	Periplasmic binding protein domain
APAR_RS04225	PF13407	Periplasmic binding protein domain
APAR_RS04235	PF04545	Sigma-70, region 4
APAR_RS04235	PF04539	Sigma-70 region 3
APAR_RS04235	PF04542	Sigma-70 region 2 
APAR_RS04235	PF00140	Sigma-70 factor, region 1.2
APAR_RS04235	PF03979	Sigma-70 factor, region 1.1
APAR_RS04240	PF08275	DNA primase catalytic core, N-terminal domain
APAR_RS04240	PF10410	DnaB-helicase binding domain of primase
APAR_RS04240	PF01807	CHC2 zinc finger
APAR_RS04245	PF06574	FAD synthetase
APAR_RS04245	PF01687	Riboflavin kinase
APAR_RS04250	PF09142	tRNA Pseudouridine synthase II, C terminal
APAR_RS04250	PF01509	TruB family pseudouridylate synthase (N terminal domain)
APAR_RS04250	PF16198	tRNA pseudouridylate synthase B C-terminal domain
APAR_RS04260	PF02033	Ribosome-binding factor A
APAR_RS04265	PF04760	Translation initiation factor IF-2, N-terminal region
APAR_RS04265	PF11987	Translation-initiation factor 2
APAR_RS04265	PF00009	Elongation factor Tu GTP binding domain
APAR_RS04270	PF13184	NusA-like KH domain
APAR_RS04270	PF00575	S1 RNA binding domain
APAR_RS04270	PF08529	NusA N-terminal domain
APAR_RS04275	PF17384	RimP C-terminal SH3 domain
APAR_RS04275	PF02576	RimP N-terminal domain
APAR_RS04280	PF13603	Leucyl-tRNA synthetase, Domain 2
APAR_RS04280	PF08264	Anticodon-binding domain of tRNA
APAR_RS04280	PF09334	tRNA synthetases class I (M)
APAR_RS04280	PF00133	tRNA synthetases class I (I, L, M and V)
APAR_RS04285	PF00478	IMP dehydrogenase / GMP reductase domain
APAR_RS04285	PF00571	CBS domain
APAR_RS04295	PF00005	ABC transporter
APAR_RS04295	PF00664	ABC transporter transmembrane region
APAR_RS04300	PF00005	ABC transporter
APAR_RS04300	PF00664	ABC transporter transmembrane region
APAR_RS04310	PF01479	S4 domain
APAR_RS04310	PF00849	RNA pseudouridylate synthase
APAR_RS04315	PF01252	Signal peptidase (SPase) II
APAR_RS04320	PF06827	Zinc finger found in FPG and IleRS
APAR_RS04320	PF00133	tRNA synthetases class I (I, L, M and V)
APAR_RS04320	PF08264	Anticodon-binding domain of tRNA
APAR_RS04325	PF01434	Peptidase family M41
APAR_RS04325	PF06480	FtsH Extracellular
APAR_RS04325	PF17862	AAA+ lid domain
APAR_RS04325	PF00004	ATPase family associated with various cellular activities (AAA)
APAR_RS04330	PF08032	RNA 2'-O ribose methyltransferase substrate binding
APAR_RS04330	PF00588	SpoU rRNA Methylase family
APAR_RS04335	PF01381	Helix-turn-helix
APAR_RS04355	PF04304	Protein of unknown function (DUF454)
APAR_RS04360	PF02978	Signal peptide binding domain
APAR_RS04360	PF02881	SRP54-type protein, helical bundle domain
APAR_RS04360	PF00448	SRP54-type protein, GTPase domain
APAR_RS04365	PF00448	SRP54-type protein, GTPase domain
APAR_RS04365	PF02881	SRP54-type protein, helical bundle domain
APAR_RS04370	PF06470	SMC proteins Flexible Hinge Domain
APAR_RS04370	PF02463	RecF/RecN/SMC N terminal domain
APAR_RS04375	PF14622	Ribonuclease-III-like
APAR_RS04375	PF00035	Double-stranded RNA binding motif
APAR_RS04380	PF00550	Phosphopantetheine attachment site
APAR_RS04385	PF02504	Fatty acid synthesis protein
APAR_RS04390	PF01783	Ribosomal L32p protein family
APAR_RS04405	PF01467	Cytidylyltransferase-like
APAR_RS04415	PF17191	RecG wedge domain
APAR_RS04415	PF00270	DEAD/DEAH box helicase
APAR_RS04415	PF00271	Helicase conserved C-terminal domain
APAR_RS04420	PF02734	DAK2 domain
APAR_RS04420	PF13684	Dihydroxyacetone kinase family
APAR_RS04425	PF03780	Asp23 family, cell envelope-related function
APAR_RS04430	PF00830	Ribosomal L28 family
APAR_RS04445	PF01189	16S rRNA methyltransferase RsmB/F
APAR_RS04445	PF01029	NusB family
APAR_RS04450	PF00551	Formyl transferase
APAR_RS04450	PF02911	Formyl transferase, C-terminal domain
APAR_RS04455	PF01327	Polypeptide deformylase
APAR_RS04460	PF18074	Primosomal protein N C-terminal domain
APAR_RS04460	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
APAR_RS04460	PF04851	Type III restriction enzyme, res subunit
APAR_RS04460	PF17764	3′ DNA-binding domain (3′BD)
APAR_RS04460	PF00271	Helicase conserved C-terminal domain
APAR_RS04465	PF00580	UvrD/REP helicase N-terminal domain
APAR_RS04465	PF13361	UvrD-like helicase C-terminal domain
APAR_RS04465	PF12705	PD-(D/E)XK nuclease superfamily
APAR_RS04475	PF03883	Peroxide stress protein YaaA
APAR_RS04490	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
APAR_RS04495	PF00381	PTS HPr component phosphorylation site
APAR_RS04505	PF02547	Queuosine biosynthesis protein
APAR_RS04510	PF02677	Epoxyqueuosine reductase QueH
APAR_RS04520	PF08264	Anticodon-binding domain of tRNA
APAR_RS04520	PF09334	tRNA synthetases class I (M)
APAR_RS04520	PF01588	Putative tRNA binding domain
APAR_RS04535	PF00664	ABC transporter transmembrane region
APAR_RS04535	PF00005	ABC transporter
APAR_RS04540	PF00005	ABC transporter
APAR_RS04540	PF00664	ABC transporter transmembrane region
APAR_RS04545	PF13419	Haloacid dehalogenase-like hydrolase
APAR_RS04565	PF00313	'Cold-shock' DNA-binding domain
APAR_RS04570	PF03734	L,D-transpeptidase catalytic domain
APAR_RS04580	PF17864	RuvB AAA lid domain
APAR_RS04580	PF05491	RuvB C-terminal winged helix domain
APAR_RS04580	PF05496	Holliday junction DNA helicase RuvB P-loop domain
APAR_RS04585	PF07499	RuvA, C-terminal domain
APAR_RS04585	PF01330	RuvA N terminal domain
APAR_RS04590	PF02075	Crossover junction endodeoxyribonuclease RuvC
APAR_RS04600	PF06397	Desulfoferrodoxin, N-terminal domain
APAR_RS04600	PF01880	Desulfoferrodoxin
APAR_RS04605	PF02811	PHP domain
APAR_RS04605	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
APAR_RS04605	PF07733	Bacterial DNA polymerase III alpha NTPase domain
APAR_RS04605	PF01336	OB-fold nucleic acid binding domain
APAR_RS04605	PF14579	Helix-hairpin-helix motif
APAR_RS04610	PF03051	Peptidase C1-like family
APAR_RS04615	PF03051	Peptidase C1-like family
APAR_RS04630	PF01205	Uncharacterized protein family UPF0029
APAR_RS04630	PF09186	Domain of unknown function (DUF1949)
APAR_RS04635	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
APAR_RS04645	PF04055	Radical SAM superfamily
APAR_RS04645	PF16199	Radical_SAM C-terminal domain
APAR_RS04645	PF00583	Acetyltransferase (GNAT) family
APAR_RS04650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
APAR_RS04655	PF00578	AhpC/TSA family
APAR_RS04685	PF00266	Aminotransferase class-V
APAR_RS04705	PF01740	STAS domain
APAR_RS04710	PF13466	STAS domain
APAR_RS04710	PF07228	Stage II sporulation protein E (SpoIIE)
APAR_RS04710	PF08448	PAS fold
APAR_RS04710	PF13581	Histidine kinase-like ATPase domain
APAR_RS04720	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
APAR_RS04725	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APAR_RS04725	PF00005	ABC transporter
APAR_RS04730	PF12911	N-terminal TM domain of oligopeptide transport permease C
APAR_RS04730	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS04735	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS04740	PF03840	Preprotein translocase SecG subunit
APAR_RS04745	PF00121	Triosephosphate isomerase
APAR_RS04750	PF00162	Phosphoglycerate kinase
APAR_RS04755	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
APAR_RS04755	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APAR_RS04760	PF02650	WhiA C-terminal HTH domain
APAR_RS04760	PF10298	WhiA N-terminal LAGLIDADG-like domain
APAR_RS04760	PF14527	WhiA LAGLIDADG-like domain
APAR_RS04765	PF03668	P-loop ATPase protein family
APAR_RS04770	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
APAR_RS04775	PF00480	ROK family
APAR_RS04780	PF00701	Dihydrodipicolinate synthetase family
APAR_RS04795	PF00005	ABC transporter
APAR_RS04795	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APAR_RS04800	PF00005	ABC transporter
APAR_RS04800	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APAR_RS04805	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS04810	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
APAR_RS04825	PF02151	UvrB/uvrC motif
APAR_RS04825	PF01541	GIY-YIG catalytic domain
APAR_RS04825	PF08459	UvrC Helix-hairpin-helix N-terminal
APAR_RS04830	PF03023	Lipid II flippase MurJ
APAR_RS04835	PF04073	Aminoacyl-tRNA editing domain
APAR_RS04840	PF17755	UvrA DNA-binding domain
APAR_RS04840	PF00005	ABC transporter
APAR_RS04840	PF17760	UvrA interaction domain
APAR_RS04845	PF04074	YhcH/YjgK/YiaL
APAR_RS04850	PF10609	NUBPL iron-transfer P-loop NTPase
APAR_RS04865	PF17757	UvrB interaction domain
APAR_RS04865	PF02151	UvrB/uvrC motif
APAR_RS04865	PF12344	Ultra-violet resistance protein B
APAR_RS04865	PF04851	Type III restriction enzyme, res subunit
APAR_RS04865	PF00271	Helicase conserved C-terminal domain
APAR_RS04875	PF01121	Dephospho-CoA kinase
APAR_RS04880	PF00005	ABC transporter
APAR_RS04880	PF08402	TOBE domain
APAR_RS04900	PF01546	Peptidase family M20/M25/M40
APAR_RS04900	PF07687	Peptidase dimerisation domain
APAR_RS04905	PF07722	Peptidase C26
APAR_RS04910	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
APAR_RS04915	PF00005	ABC transporter
APAR_RS04915	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APAR_RS04920	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
APAR_RS04920	PF00005	ABC transporter
APAR_RS04925	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS04925	PF12911	N-terminal TM domain of oligopeptide transport permease C
APAR_RS04930	PF00528	Binding-protein-dependent transport system inner membrane component
APAR_RS04935	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
APAR_RS04940	PF05738	Cna protein B-type domain
APAR_RS04940	PF05737	Collagen binding domain
APAR_RS04940	PF17802	Prealbumin-like fold domain
APAR_RS04945	PF00575	S1 RNA binding domain
APAR_RS04955	PF00258	Flavodoxin
APAR_RS04975	PF00255	Glutathione peroxidase
APAR_RS04980	PF01047	MarR family
APAR_RS04985	PF16916	Dimerisation domain of Zinc Transporter
APAR_RS04985	PF01545	Cation efflux family
APAR_RS04990	PF07664	Ferrous iron transport protein B C terminus
APAR_RS04990	PF17910	FeoB cytosolic helical domain
APAR_RS04990	PF02421	Ferrous iron transport protein B
APAR_RS04990	PF07670	Nucleoside recognition
APAR_RS04995	PF02421	Ferrous iron transport protein B
APAR_RS04995	PF04023	FeoA domain
APAR_RS04995	PF07664	Ferrous iron transport protein B C terminus
APAR_RS04995	PF17910	FeoB cytosolic helical domain
APAR_RS04995	PF07670	Nucleoside recognition
APAR_RS05005	PF00311	Phosphoenolpyruvate carboxylase
APAR_RS05025	PF01048	Phosphorylase superfamily
APAR_RS05045	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
APAR_RS05045	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
APAR_RS05050	PF02645	Uncharacterised protein, DegV family COG1307
APAR_RS05055	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
APAR_RS05055	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
APAR_RS05060	PF00497	Bacterial extracellular solute-binding proteins, family 3
APAR_RS05065	PF00156	Phosphoribosyl transferase domain
APAR_RS05080	PF00005	ABC transporter
APAR_RS05100	PF01790	Prolipoprotein diacylglyceryl transferase
APAR_RS05105	PF00692	dUTPase
APAR_RS05110	PF01106	NifU-like domain
APAR_RS05115	PF01136	Peptidase family U32
APAR_RS05115	PF16325	Peptidase family U32 C-terminal domain
APAR_RS05120	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
APAR_RS05125	PF00535	Glycosyl transferase family 2
APAR_RS05140	PF04991	LicD family
APAR_RS05155	PF12804	MobA-like NTP transferase domain
APAR_RS05160	PF04991	LicD family
APAR_RS05165	PF16363	GDP-mannose 4,6 dehydratase
APAR_RS05170	PF04321	RmlD substrate binding domain
APAR_RS05175	PF00483	Nucleotidyl transferase
APAR_RS05185	PF00579	tRNA synthetases class I (W and Y)
APAR_RS05190	PF00912	Transglycosylase
APAR_RS05190	PF00905	Penicillin binding protein transpeptidase domain
APAR_RS05195	PF01316	Arginine repressor, DNA binding domain
APAR_RS05195	PF02863	Arginine repressor, C-terminal domain
APAR_RS05205	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APAR_RS05205	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APAR_RS05205	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APAR_RS05205	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APAR_RS05210	PF10672	S-adenosylmethionine-dependent methyltransferase
APAR_RS05210	PF02926	THUMP domain
APAR_RS05210	PF01170	Putative RNA methylase family UPF0020
APAR_RS05215	PF02705	K+ potassium transporter
APAR_RS05235	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
APAR_RS05305	PF00437	Type II/IV secretion system protein
APAR_RS05310	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
APAR_RS05320	PF03193	RsgA GTPase
APAR_RS05325	PF00690	Cation transporter/ATPase, N-terminus
APAR_RS05325	PF00689	Cation transporting ATPase, C-terminus
APAR_RS05330	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
APAR_RS05330	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
APAR_RS05335	PF00391	PEP-utilising enzyme, mobile domain
APAR_RS05335	PF00224	Pyruvate kinase, barrel domain
APAR_RS05335	PF02887	Pyruvate kinase, alpha/beta domain
APAR_RS05340	PF00005	ABC transporter
APAR_RS05340	PF00664	ABC transporter transmembrane region
APAR_RS05345	PF04954	Siderophore-interacting protein
APAR_RS05345	PF08021	Siderophore-interacting FAD-binding domain
APAR_RS05345	PF00005	ABC transporter
APAR_RS05345	PF00664	ABC transporter transmembrane region
APAR_RS05355	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS05355	PF00072	Response regulator receiver domain
APAR_RS05360	PF00672	HAMP domain
APAR_RS05360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS05360	PF00512	His Kinase A (phospho-acceptor) domain
APAR_RS05365	PF02903	Alpha amylase, N-terminal ig-like domain
APAR_RS05365	PF00128	Alpha amylase, catalytic domain
APAR_RS05365	PF00686	Starch binding domain
APAR_RS05370	PF00534	Glycosyl transferases group 1
APAR_RS05370	PF08323	Starch synthase catalytic domain
APAR_RS05375	PF00483	Nucleotidyl transferase
APAR_RS05380	PF00483	Nucleotidyl transferase
APAR_RS05380	PF00132	Bacterial transferase hexapeptide (six repeats)
APAR_RS05385	PF00343	Carbohydrate phosphorylase
APAR_RS05390	PF02806	Alpha amylase, C-terminal all-beta domain
APAR_RS05390	PF00128	Alpha amylase, catalytic domain
APAR_RS05390	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
APAR_RS05395	PF00465	Iron-containing alcohol dehydrogenase 
APAR_RS05405	PF03484	tRNA synthetase B5 domain
APAR_RS05405	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
APAR_RS05405	PF01588	Putative tRNA binding domain
APAR_RS05405	PF03147	Ferredoxin-fold anticodon binding domain
APAR_RS05405	PF03483	B3/4 domain
APAR_RS05410	PF01409	tRNA synthetases class II core domain (F)
APAR_RS05410	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
APAR_RS05415	PF00950	ABC 3 transport family
APAR_RS05420	PF00005	ABC transporter
APAR_RS05425	PF01297	Zinc-uptake complex component A periplasmic
APAR_RS05430	PF04239	Protein of unknown function (DUF421)
APAR_RS05440	PF01979	Amidohydrolase family
APAR_RS05445	PF01380	SIS domain
APAR_RS05450	PF00392	Bacterial regulatory proteins, gntR family
APAR_RS05450	PF07702	UTRA domain
APAR_RS05455	PF03613	PTS system mannose/fructose/sorbose family IID component
APAR_RS05460	PF03609	PTS system sorbose-specific iic component
APAR_RS05465	PF03830	PTS system sorbose subfamily IIB component
APAR_RS05470	PF02699	Preprotein translocase subunit
APAR_RS05480	PF00294	pfkB family carbohydrate kinase
APAR_RS05485	PF01116	Fructose-bisphosphate aldolase class-II
APAR_RS05490	PF01063	Amino-transferase class IV
APAR_RS05495	PF04343	Protein of unknown function, DUF488
APAR_RS05500	PF01177	Asp/Glu/Hydantoin racemase
APAR_RS05505	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
APAR_RS05520	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
APAR_RS05520	PF00367	phosphotransferase system, EIIB
APAR_RS05520	PF02378	Phosphotransferase system, EIIC 
APAR_RS05525	PF02687	FtsX-like permease family
APAR_RS05525	PF02687	FtsX-like permease family
APAR_RS05530	PF00005	ABC transporter
APAR_RS05540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS05545	PF00072	Response regulator receiver domain
APAR_RS05545	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS05555	PF00398	Ribosomal RNA adenine dimethylase
APAR_RS05560	PF09334	tRNA synthetases class I (M)
APAR_RS05560	PF01588	Putative tRNA binding domain
APAR_RS05560	PF08264	Anticodon-binding domain of tRNA
APAR_RS05570	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
APAR_RS05580	PF01242	6-pyruvoyl tetrahydropterin synthase
APAR_RS05585	PF04468	PSP1 C-terminal conserved region
APAR_RS05590	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
APAR_RS05590	PF12170	DNA polymerase III tau subunit V interacting with alpha
APAR_RS05590	PF12169	DNA polymerase III subunits gamma and tau domain III
APAR_RS05595	PF02223	Thymidylate kinase
APAR_RS05600	PF01396	Topoisomerase DNA binding C4 zinc finger
APAR_RS05600	PF01751	Toprim domain
APAR_RS05600	PF01131	DNA topoisomerase
APAR_RS05605	PF00902	Sec-independent protein translocase protein (TatC)
APAR_RS05610	PF02416	mttA/Hcf106 family
APAR_RS05615	PF01740	STAS domain
APAR_RS05625	PF12897	Alanine-glyoxylate amino-transferase
APAR_RS05640	PF06965	Na+/H+ antiporter 1
APAR_RS05645	PF02645	Uncharacterised protein, DegV family COG1307
APAR_RS05650	PF00075	RNase H
APAR_RS05655	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
APAR_RS05655	PF00476	DNA polymerase family A
APAR_RS05655	PF01367	5'-3' exonuclease, C-terminal SAM fold
APAR_RS05660	PF18318	Glutamine synthetase C-terminal domain
APAR_RS05660	PF12437	Glutamine synthetase type III N terminal 
APAR_RS05660	PF00120	Glutamine synthetase, catalytic domain
APAR_RS05670	PF02659	Putative manganese efflux pump
APAR_RS05680	PF03960	ArsC family
APAR_RS05690	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
APAR_RS05690	PF00533	BRCA1 C Terminus (BRCT) domain
APAR_RS05690	PF01653	NAD-dependent DNA ligase adenylation domain
APAR_RS05690	PF03120	NAD-dependent DNA ligase OB-fold domain
APAR_RS05690	PF12826	Helix-hairpin-helix motif
APAR_RS05705	PF00005	ABC transporter
APAR_RS05720	PF11799	impB/mucB/samB family C-terminal domain
APAR_RS05720	PF00817	impB/mucB/samB family
APAR_RS05720	PF11798	IMS family HHH motif
APAR_RS05735	PF00465	Iron-containing alcohol dehydrogenase 
APAR_RS05740	PF02645	Uncharacterised protein, DegV family COG1307
APAR_RS05755	PF03477	ATP cone domain
APAR_RS05755	PF13597	Anaerobic ribonucleoside-triphosphate reductase
APAR_RS05765	PF00535	Glycosyl transferase family 2
APAR_RS05780	PF01416	tRNA pseudouridine synthase
APAR_RS05785	PF02361	Cobalt transport protein
APAR_RS05790	PF00005	ABC transporter
APAR_RS05795	PF01196	Ribosomal protein L17
APAR_RS05800	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
APAR_RS05800	PF01000	RNA polymerase Rpb3/RpoA insert domain
APAR_RS05800	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
APAR_RS05805	PF00163	Ribosomal protein S4/S9 N-terminal domain
APAR_RS05805	PF01479	S4 domain
APAR_RS05810	PF00411	Ribosomal protein S11
APAR_RS05815	PF00416	Ribosomal protein S13/S18
APAR_RS05820	PF00444	Ribosomal protein L36
APAR_RS05825	PF01176	Translation initiation factor 1A / IF-1
APAR_RS05830	PF00557	Metallopeptidase family M24
APAR_RS05835	PF05191	Adenylate kinase, active site lid
APAR_RS05840	PF00344	SecY translocase
APAR_RS05845	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
APAR_RS05850	PF00327	Ribosomal protein L30p/L7e
APAR_RS05855	PF03719	Ribosomal protein S5, C-terminal domain
APAR_RS05855	PF00333	Ribosomal protein S5, N-terminal domain
APAR_RS05860	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
APAR_RS05865	PF00347	Ribosomal protein L6
APAR_RS05870	PF00410	Ribosomal protein S8
APAR_RS05875	PF00673	ribosomal L5P family C-terminus
APAR_RS05875	PF00281	Ribosomal protein L5
APAR_RS05880	PF00467	KOW motif
APAR_RS05880	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
APAR_RS05885	PF00238	Ribosomal protein L14p/L23e
APAR_RS05890	PF00366	Ribosomal protein S17
APAR_RS05895	PF00831	Ribosomal L29 protein
APAR_RS05900	PF00252	Ribosomal protein L16p/L10e
APAR_RS05905	PF07650	KH domain
APAR_RS05905	PF00189	Ribosomal protein S3, C-terminal domain
APAR_RS05910	PF00237	Ribosomal protein L22p/L17e
APAR_RS05915	PF00203	Ribosomal protein S19
APAR_RS05920	PF03947	Ribosomal Proteins L2, C-terminal domain
APAR_RS05920	PF00181	Ribosomal Proteins L2, RNA binding domain
APAR_RS05925	PF00276	Ribosomal protein L23
APAR_RS05930	PF00573	Ribosomal protein L4/L1 family
APAR_RS05935	PF00297	Ribosomal protein L3
APAR_RS05945	PF00338	Ribosomal protein S10p/S20e
APAR_RS05950	PF14492	Elongation Factor G, domain II
APAR_RS05950	PF03764	Elongation factor G, domain IV
APAR_RS05950	PF00679	Elongation factor G C-terminus
APAR_RS05950	PF03144	Elongation factor Tu domain 2
APAR_RS05950	PF00009	Elongation factor Tu GTP binding domain
APAR_RS05955	PF00177	Ribosomal protein S7p/S5e
APAR_RS05960	PF00164	Ribosomal protein S12/S23
APAR_RS05975	PF01022	Bacterial regulatory protein, arsR family
APAR_RS05980	PF04983	RNA polymerase Rpb1, domain 3
APAR_RS05980	PF04997	RNA polymerase Rpb1, domain 1
APAR_RS05980	PF00623	RNA polymerase Rpb1, domain 2
APAR_RS05980	PF04998	RNA polymerase Rpb1, domain 5
APAR_RS05980	PF05000	RNA polymerase Rpb1, domain 4
APAR_RS05985	PF04565	RNA polymerase Rpb2, domain 3
APAR_RS05985	PF04560	RNA polymerase Rpb2, domain 7
APAR_RS05985	PF04563	RNA polymerase beta subunit
APAR_RS05985	PF00562	RNA polymerase Rpb2, domain 6
APAR_RS05985	PF10385	RNA polymerase beta subunit external 1 domain
APAR_RS05985	PF04561	RNA polymerase Rpb2, domain 2
APAR_RS05990	PF16320	Ribosomal protein L7/L12 dimerisation domain
APAR_RS05990	PF00542	Ribosomal protein L7/L12 C-terminal domain
APAR_RS05995	PF00466	Ribosomal protein L10
APAR_RS06000	PF00687	Ribosomal protein L1p/L10e family
APAR_RS06005	PF00298	Ribosomal protein L11, RNA binding domain
APAR_RS06005	PF03946	Ribosomal protein L11, N-terminal domain
APAR_RS06010	PF02357	Transcription termination factor nusG
APAR_RS06010	PF00467	KOW motif
APAR_RS06025	PF00471	Ribosomal protein L33
APAR_RS06030	PF00009	Elongation factor Tu GTP binding domain
APAR_RS06030	PF03144	Elongation factor Tu domain 2
APAR_RS06030	PF03143	Elongation factor Tu C-terminal domain
APAR_RS06060	PF08032	RNA 2'-O ribose methyltransferase substrate binding
APAR_RS06060	PF00588	SpoU rRNA Methylase family
APAR_RS06065	PF01406	tRNA synthetases class I (C) catalytic domain
APAR_RS06065	PF09190	DALR domain
APAR_RS06070	PF00664	ABC transporter transmembrane region
APAR_RS06070	PF00005	ABC transporter
APAR_RS06075	PF02542	YgbB family
APAR_RS06080	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
APAR_RS06085	PF00633	Helix-hairpin-helix motif
APAR_RS06085	PF02457	DisA bacterial checkpoint controller nucleotide-binding
APAR_RS06085	PF10635	DisA bacterial checkpoint controller linker region 
APAR_RS06090	PF02861	Clp amino terminal domain, pathogenicity island component
APAR_RS06090	PF07724	AAA domain (Cdc48 subfamily)
APAR_RS06090	PF00004	ATPase family associated with various cellular activities (AAA)
APAR_RS06090	PF10431	C-terminal, D2-small domain, of ClpB protein 
APAR_RS06090	PF17871	AAA lid domain
APAR_RS06095	PF00152	tRNA synthetases class II (D, K and N) 
APAR_RS06095	PF01336	OB-fold nucleic acid binding domain
APAR_RS06100	PF03449	Transcription elongation factor, N-terminal
APAR_RS06100	PF01272	Transcription elongation factor, GreA/GreB, C-term
APAR_RS06105	PF02416	mttA/Hcf106 family
APAR_RS06115	PF00390	Malic enzyme, N-terminal domain
APAR_RS06115	PF03949	Malic enzyme, NAD binding domain
APAR_RS06120	PF01156	Inosine-uridine preferring nucleoside hydrolase
APAR_RS06125	PF00294	pfkB family carbohydrate kinase
APAR_RS06130	PF00689	Cation transporting ATPase, C-terminus
APAR_RS06130	PF00690	Cation transporter/ATPase, N-terminus
APAR_RS06140	PF00881	Nitroreductase family
APAR_RS06150	PF00367	phosphotransferase system, EIIB
APAR_RS06150	PF02378	Phosphotransferase system, EIIC 
APAR_RS06155	PF01380	SIS domain
APAR_RS06160	PF01380	SIS domain
APAR_RS06160	PF01418	Helix-turn-helix domain, rpiR family
APAR_RS06165	PF00144	Beta-lactamase
APAR_RS06170	PF03358	NADPH-dependent FMN reductase
APAR_RS06175	PF13185	GAF domain
APAR_RS06185	PF01432	Peptidase family M3
APAR_RS06185	PF08439	Oligopeptidase F
APAR_RS06225	PF10117	McrBC 5-methylcytosine restriction system component
APAR_RS06250	PF08245	Mur ligase middle domain
APAR_RS06250	PF02875	Mur ligase family, glutamate ligase domain
APAR_RS06255	PF09364	XFP N-terminal domain
APAR_RS06255	PF09363	XFP C-terminal domain
APAR_RS06255	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
APAR_RS06260	PF00356	Bacterial regulatory proteins, lacI family
APAR_RS06265	PF05167	Uncharacterised ACR (DUF711)
APAR_RS06280	PF12161	HsdM N-terminal domain
APAR_RS06280	PF02384	N-6 DNA Methylase
APAR_RS06290	PF07683	Cobalamin synthesis protein cobW C-terminal domain
APAR_RS06290	PF02492	CobW/HypB/UreG, nucleotide-binding domain
APAR_RS06295	PF00107	Zinc-binding dehydrogenase
APAR_RS06295	PF08240	Alcohol dehydrogenase GroES-like domain
APAR_RS06305	PF00999	Sodium/hydrogen exchanger family
APAR_RS06335	PF00512	His Kinase A (phospho-acceptor) domain
APAR_RS06335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS06340	PF00072	Response regulator receiver domain
APAR_RS06340	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS06365	PF00857	Isochorismatase family
APAR_RS06370	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
APAR_RS06375	PF03167	Uracil DNA glycosylase superfamily
APAR_RS06380	PF00842	Alanine racemase, C-terminal domain
APAR_RS06380	PF01168	Alanine racemase, N-terminal domain
APAR_RS06385	PF01256	Carbohydrate kinase
APAR_RS06385	PF03853	YjeF-related protein N-terminus
APAR_RS06390	PF01648	4'-phosphopantetheinyl transferase superfamily
APAR_RS06395	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APAR_RS06395	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APAR_RS06395	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APAR_RS06395	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APAR_RS06400	PF00380	Ribosomal protein S9/S16
APAR_RS06405	PF00572	Ribosomal protein L13
APAR_RS06415	PF00294	pfkB family carbohydrate kinase
APAR_RS06425	PF01381	Helix-turn-helix
APAR_RS06435	PF02378	Phosphotransferase system, EIIC 
APAR_RS06440	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS06445	PF02210	Laminin G domain
APAR_RS06445	PF08244	Glycosyl hydrolases family 32 C terminal
APAR_RS06445	PF00251	Glycosyl hydrolases family 32 N-terminal domain
APAR_RS06445	PF02368	Bacterial Ig-like domain (group 2)
APAR_RS06490	PF10400	Virulence activator alpha C-term
APAR_RS06490	PF03551	Transcriptional regulator PadR-like family
APAR_RS06495	PF16123	Hydroxyacylglutathione hydrolase C-terminus
APAR_RS06495	PF00753	Metallo-beta-lactamase superfamily
APAR_RS06500	PF08241	Methyltransferase domain
APAR_RS06510	PF00301	Rubredoxin
APAR_RS06515	PF01668	SmpB protein
APAR_RS06525	PF00773	RNB domain
APAR_RS06525	PF17876	Cold shock domain
APAR_RS06525	PF00575	S1 RNA binding domain
APAR_RS06525	PF08206	Ribonuclease B OB domain
APAR_RS06530	PF01979	Amidohydrolase family
APAR_RS06540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
APAR_RS06545	PF18075	FtsX extracellular domain
APAR_RS06545	PF02687	FtsX-like permease family
APAR_RS06550	PF00005	ABC transporter
APAR_RS06560	PF00701	Dihydrodipicolinate synthetase family
APAR_RS06565	PF01380	SIS domain
APAR_RS06565	PF00571	CBS domain
APAR_RS06575	PF03611	PTS system sugar-specific permease component
APAR_RS06580	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
APAR_RS06585	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APAR_RS06590	PF08220	DeoR-like helix-turn-helix domain
APAR_RS06590	PF00455	DeoR C terminal sensor domain
APAR_RS06595	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
APAR_RS06595	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
APAR_RS06600	PF00472	RF-1 domain
APAR_RS06600	PF03462	PCRF domain
APAR_RS06605	PF07517	SecA DEAD-like domain
APAR_RS06605	PF02810	SEC-C motif
APAR_RS06605	PF07516	SecA Wing and Scaffold domain
APAR_RS06605	PF01043	SecA preprotein cross-linking domain
APAR_RS06630	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
APAR_RS06630	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
APAR_RS06630	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
APAR_RS06630	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
APAR_RS06635	PF00483	Nucleotidyl transferase
APAR_RS06645	PF03816	Cell envelope-related transcriptional attenuator domain
APAR_RS06650	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
APAR_RS06655	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
APAR_RS06660	PF02874	ATP synthase alpha/beta family, beta-barrel domain
APAR_RS06660	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APAR_RS06665	PF00231	ATP synthase
APAR_RS06670	PF02874	ATP synthase alpha/beta family, beta-barrel domain
APAR_RS06670	PF00306	ATP synthase alpha/beta chain, C terminal domain
APAR_RS06670	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
APAR_RS06675	PF00213	ATP synthase delta (OSCP) subunit
APAR_RS06680	PF00430	ATP synthase B/B' CF(0)
APAR_RS06685	PF00137	ATP synthase subunit C
APAR_RS06690	PF00119	ATP synthase A chain
APAR_RS06700	PF02502	Ribose/Galactose Isomerase
APAR_RS06705	PF01300	Telomere recombination
APAR_RS06710	PF05175	Methyltransferase small domain
APAR_RS06710	PF17827	PrmC N-terminal domain
APAR_RS06715	PF03462	PCRF domain
APAR_RS06715	PF00472	RF-1 domain
APAR_RS06725	PF09335	SNARE associated Golgi protein
APAR_RS06735	PF03613	PTS system mannose/fructose/sorbose family IID component
APAR_RS06740	PF03609	PTS system sorbose-specific iic component
APAR_RS06755	PF00342	Phosphoglucose isomerase
APAR_RS06765	PF00085	Thioredoxin
APAR_RS06770	PF01569	PAP2 superfamily
APAR_RS06780	PF04397	LytTr DNA-binding domain
APAR_RS06780	PF00072	Response regulator receiver domain
APAR_RS06785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS06785	PF13492	GAF domain
APAR_RS06785	PF07694	5TMR of 5TMR-LYT
APAR_RS06785	PF06580	Histidine kinase
APAR_RS06800	PF08245	Mur ligase middle domain
APAR_RS06800	PF08353	Domain of unknown function (DUF1727)
APAR_RS06805	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
APAR_RS06805	PF12838	4Fe-4S dicluster domain
APAR_RS06805	PF10371	Domain of unknown function
APAR_RS06805	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
APAR_RS06805	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
APAR_RS06805	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
APAR_RS06815	PF02142	MGS-like domain
APAR_RS06815	PF01808	AICARFT/IMPCHase bienzyme
APAR_RS06825	PF00749	tRNA synthetases class I (E and Q), catalytic domain
APAR_RS06830	PF00512	His Kinase A (phospho-acceptor) domain
APAR_RS06830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS06830	PF18719	ArlS sensor domain
APAR_RS06840	PF00367	phosphotransferase system, EIIB
APAR_RS06840	PF02378	Phosphotransferase system, EIIC 
APAR_RS06845	PF11941	Domain of unknown function (DUF3459)
APAR_RS06845	PF00128	Alpha amylase, catalytic domain
APAR_RS06865	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
APAR_RS06865	PF02403	Seryl-tRNA synthetase N-terminal domain
APAR_RS06880	PF00069	Protein kinase domain
APAR_RS06880	PF03793	PASTA domain
APAR_RS06885	PF00498	FHA domain
APAR_RS06885	PF01061	ABC-2 type transporter
APAR_RS06885	PF00005	ABC transporter
APAR_RS06900	PF01098	Cell cycle protein
APAR_RS06905	PF03793	PASTA domain
APAR_RS06905	PF00069	Protein kinase domain
APAR_RS06920	PF01259	SAICAR synthetase
APAR_RS06925	PF18698	Histidine kinase sensor domain
APAR_RS06925	PF00672	HAMP domain
APAR_RS06925	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
APAR_RS06925	PF00512	His Kinase A (phospho-acceptor) domain
APAR_RS06925	PF00989	PAS fold
APAR_RS06930	PF00072	Response regulator receiver domain
APAR_RS06930	PF00486	Transcriptional regulatory protein, C terminal
APAR_RS06940	PF10397	Adenylosuccinate lyase C-terminus
APAR_RS06940	PF00206	Lyase
APAR_RS06950	PF02073	Thermophilic metalloprotease (M29)
APAR_RS06985	PF00929	Exonuclease
APAR_RS06985	PF13307	Helicase C-terminal domain
APAR_RS06985	PF04851	Type III restriction enzyme, res subunit
APAR_RS06990	PF07478	D-ala D-ala ligase C-terminus
APAR_RS06990	PF01820	D-ala D-ala ligase N-terminus
APAR_RS06995	PF04055	Radical SAM superfamily
APAR_RS07005	PF02195	ParB-like nuclease domain
APAR_RS07005	PF17762	HTH domain found in ParB protein
APAR_RS07010	PF13614	AAA domain
APAR_RS07015	PF02527	rRNA small subunit methyltransferase G
APAR_RS07020	PF14804	Jag N-terminus
APAR_RS07020	PF01424	R3H domain
APAR_RS07025	PF02096	60Kd inner membrane protein
APAR_RS07025	PF14849	YidC periplasmic domain
APAR_RS07030	PF01809	Putative membrane protein insertion efficiency factor
APAR_RS07035	PF00825	Ribonuclease P
APAR_RS07040	PF00468	Ribosomal protein L34
APAR_RS07070	PF00456	Transketolase, thiamine diphosphate binding domain
APAR_RS07090	PF12833	Helix-turn-helix domain
APAR_RS07090	PF01497	Periplasmic binding protein
APAR_RS07105	PF00929	Exonuclease
APAR_RS07140	PF10531	SLBB domain
APAR_RS07145	PF12833	Helix-turn-helix domain
APAR_RS07150	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
APAR_RS07175	PF13673	Acetyltransferase (GNAT) domain
APAR_RS07180	PF01501	Glycosyl transferase family 8
APAR_RS07190	PF01381	Helix-turn-helix
