APAR_RS00010	SM00387	Histidine kinase-like ATPases
APAR_RS00015	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00015	SM00760	Bacterial dnaA protein helix-turn-helix domain
APAR_RS00020	SM00480	DNA polymerase III beta subunit
APAR_RS00035	SM00387	Histidine kinase-like ATPases
APAR_RS00035	SM00433	TopoisomeraseII
APAR_RS00040	SM00434	DNA Topoisomerase IV
APAR_RS00070	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00075	SM00354	helix_turn _helix lactose operon repressor
APAR_RS00155	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00160	SM00788	Adenylosuccinate synthetase
APAR_RS00165	SM01209	APAR_RS00165
APAR_RS00165	SM01210	APAR_RS00165
APAR_RS00175	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00190	SM01001	AIR carboxylase
APAR_RS00305	SM00244	prohibitin homologues
APAR_RS00315	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00325	SM00838	Elongation factor G C-terminus
APAR_RS00325	SM00889	Elongation factor G, domain IV
APAR_RS00330	SM00861	Transketolase, pyrimidine binding domain
APAR_RS00345	SM00849	Metallo-beta-lactamase superfamily
APAR_RS00350	SM00116	Domain in cystathionine beta-synthase and other proteins.
APAR_RS00350	SM01091	Transporter associated domain
APAR_RS00375	SM00116	Domain in cystathionine beta-synthase and other proteins.
APAR_RS00375	SM00924	MgtE intracellular N domain
APAR_RS00405	SM00487	DEAD-like helicases superfamily
APAR_RS00405	SM00490	helicase superfamily c-terminal domain
APAR_RS00420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS00420	SM00866	APAR_RS00420
APAR_RS00475	SM00448	cheY-homologous receiver domain
APAR_RS00475	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS00480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APAR_RS00480	SM00387	Histidine kinase-like ATPases
APAR_RS00480	SM00388	His Kinase A (phosphoacceptor) domain
APAR_RS00505	SM00271	DnaJ molecular chaperone homology domain
APAR_RS00510	SM00422	helix_turn_helix, mercury resistance
APAR_RS00525	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00525	SM01086	C-terminal, D2-small domain, of ClpB protein
APAR_RS00550	SM00849	Metallo-beta-lactamase superfamily
APAR_RS00555	SM00977	TilS substrate C-terminal domain
APAR_RS00570	SM00481	DNA polymerase alpha chain like domain
APAR_RS00600	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00610	SM00493	APAR_RS00610
APAR_RS00635	SM00478	endonuclease III
APAR_RS00645	SM00478	endonuclease III
APAR_RS00645	SM00525	APAR_RS00645
APAR_RS00650	SM00487	DEAD-like helicases superfamily
APAR_RS00650	SM00490	helicase superfamily c-terminal domain
APAR_RS00650	SM00982	APAR_RS00650
APAR_RS00650	SM01058	CarD-like/TRCF domain
APAR_RS00690	SM00861	Transketolase, pyrimidine binding domain
APAR_RS00715	SM01133	APAR_RS00715
APAR_RS00730	SM00419	helix_turn_helix, cAMP Regulatory protein
APAR_RS00760	SM00382	ATPases associated with a variety of cellular activities
APAR_RS00780	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
APAR_RS00795	SM00354	helix_turn _helix lactose operon repressor
APAR_RS00920	SM00861	Transketolase, pyrimidine binding domain
APAR_RS00970	SM00883	Chaperonin 10 Kd subunit
APAR_RS01045	SM00487	DEAD-like helicases superfamily
APAR_RS01115	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01145	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS01205	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
APAR_RS01340	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01345	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS01360	SM00852	Probable molybdopterin binding domain
APAR_RS01365	SM00852	Probable molybdopterin binding domain
APAR_RS01395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS01410	SM00910	APAR_RS01410
APAR_RS01420	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01425	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01460	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01470	SM00822	APAR_RS01470
APAR_RS01515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS01525	SM00833	Cobalamin synthesis protein cobW C-terminal domain
APAR_RS01535	SM01131	APAR_RS01535
APAR_RS01540	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
APAR_RS01555	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01570	SM00870	APAR_RS01570
APAR_RS01675	SM00420	helix_turn_helix, Deoxyribose operon repressor
APAR_RS01675	SM01134	APAR_RS01675
APAR_RS01705	SM01007	Class II Aldolase and Adducin N-terminal domain
APAR_RS01725	SM00861	Transketolase, pyrimidine binding domain
APAR_RS01735	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01765	SM01400	APAR_RS01765
APAR_RS01800	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01815	SM01211	APAR_RS01815
APAR_RS01825	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01855	SM01192	APAR_RS01855
APAR_RS01855	SM01193	APAR_RS01855
APAR_RS01880	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01950	SM00382	ATPases associated with a variety of cellular activities
APAR_RS01955	SM01264	APAR_RS01955
APAR_RS02030	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02100	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02155	SM00220	Serine/Threonine protein kinases, catalytic domain
APAR_RS02160	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02175	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02180	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02190	SM00342	helix_turn_helix, arabinose operon control protein
APAR_RS02190	SM00871	Bacterial transcription activator, effector binding domain
APAR_RS02200	SM00855	Phosphoglycerate mutase family
APAR_RS02210	SM01230	APAR_RS02210
APAR_RS02215	SM00062	Bacterial periplasmic substrate-binding proteins
APAR_RS02215	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
APAR_RS02225	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02230	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS02235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APAR_RS02245	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02285	SM00986	Uracil DNA glycosylase superfamily
APAR_RS02285	SM00987	UreE urease accessory protein, C-terminal domain 
APAR_RS02300	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02305	SM00062	Bacterial periplasmic substrate-binding proteins
APAR_RS02325	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02350	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APAR_RS02355	SM00732	Likely ribonuclease with RNase H fold.
APAR_RS02405	SM00841	Elongation factor P, C-terminal
APAR_RS02405	SM01185	APAR_RS02405
APAR_RS02510	SM00864	Tubulin/FtsZ family, GTPase domain
APAR_RS02510	SM00865	Tubulin/FtsZ family, C-terminal domain
APAR_RS02550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS02615	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02650	SM01130	APAR_RS02650
APAR_RS02670	SM00487	DEAD-like helicases superfamily
APAR_RS02670	SM00490	helicase superfamily c-terminal domain
APAR_RS02675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS02675	SM00954	Region found in RelA / SpoT proteins
APAR_RS02680	SM00849	Metallo-beta-lactamase superfamily
APAR_RS02730	SM00836	DALR anticodon binding domain
APAR_RS02730	SM01016	Arginyl tRNA synthetase N terminal dom
APAR_RS02735	SM00347	helix_turn_helix multiple antibiotic resistance protein
APAR_RS02740	SM00357	Cold shock protein domain
APAR_RS02740	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02740	SM00384	DNA binding domain with preference for A/T rich regions
APAR_RS02740	SM00959	Rho termination factor, N-terminal domain
APAR_RS02765	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02770	SM00382	ATPases associated with a variety of cellular activities
APAR_RS02795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
APAR_RS02840	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS02845	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS02855	SM01040	BRO family, N-terminal domain
APAR_RS02940	SM00507	HNH nucleases
APAR_RS03045	SM00644	APAR_RS03045
APAR_RS03090	SM00046	Diacylglycerol kinase catalytic domain (presumed)
APAR_RS03100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS03100	SM00866	APAR_RS03100
APAR_RS03120	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03145	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
APAR_RS03155	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
APAR_RS03160	SM00851	MGS-like domain
APAR_RS03160	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
APAR_RS03180	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03180	SM00994	ClpX C4-type zinc finger
APAR_RS03180	SM01086	C-terminal, D2-small domain, of ClpB protein
APAR_RS03235	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
APAR_RS03290	SM00046	Diacylglycerol kinase catalytic domain (presumed)
APAR_RS03295	SM00341	Helicase and RNase D C-terminal
APAR_RS03295	SM00474	3'-5' exonuclease
APAR_RS03395	SM00830	Chorismate mutase type II
APAR_RS03440	SM00028	Tetratricopeptide repeats
APAR_RS03475	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS03500	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS03565	SM00836	DALR anticodon binding domain
APAR_RS03580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS03600	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
APAR_RS03705	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03725	SM00363	S4 RNA-binding domain
APAR_RS03730	SM00855	Phosphoglycerate mutase family
APAR_RS03735	SM00563	Phosphate acyltransferases
APAR_RS03750	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03755	SM01207	APAR_RS03755
APAR_RS03785	SM00518	AP endonuclease family 2
APAR_RS03790	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03795	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03800	SM00382	ATPases associated with a variety of cellular activities
APAR_RS03880	SM00240	Forkhead associated domain
APAR_RS03885	SM00422	helix_turn_helix, mercury resistance
APAR_RS03960	SM00257	Lysin motif
APAR_RS03985	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS04000	SM00322	K homology RNA-binding domain
APAR_RS04000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
APAR_RS04010	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04025	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS04035	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS04040	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04040	SM00843	APAR_RS04040
APAR_RS04045	SM00849	Metallo-beta-lactamase superfamily
APAR_RS04050	SM00316	Ribosomal protein S1-like RNA-binding domain
APAR_RS04050	SM00322	K homology RNA-binding domain
APAR_RS04055	SM01387	APAR_RS04055
APAR_RS04085	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS04090	SM00271	DnaJ molecular chaperone homology domain
APAR_RS04095	SM00271	DnaJ molecular chaperone homology domain
APAR_RS04105	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS04115	SM00838	Elongation factor G C-terminus
APAR_RS04130	SM00849	Metallo-beta-lactamase superfamily
APAR_RS04140	SM00981	APAR_RS04140
APAR_RS04145	SM01409	APAR_RS04145
APAR_RS04150	SM00072	Guanylate kinase homologues.
APAR_RS04160	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
APAR_RS04190	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04195	SM00354	helix_turn _helix lactose operon repressor
APAR_RS04220	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04240	SM00400	zinc finger
APAR_RS04240	SM00493	APAR_RS04240
APAR_RS04245	SM00904	Riboflavin kinase
APAR_RS04270	SM00322	K homology RNA-binding domain
APAR_RS04285	SM00116	Domain in cystathionine beta-synthase and other proteins.
APAR_RS04285	SM01240	APAR_RS04285
APAR_RS04295	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04300	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04310	SM00363	S4 RNA-binding domain
APAR_RS04325	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04335	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS04335	SM00966	SpoVT / AbrB like domain 
APAR_RS04360	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04360	SM00962	SRP54-type protein, GTPase domain
APAR_RS04360	SM00963	SRP54-type protein, helical bundle domain
APAR_RS04365	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04365	SM00962	SRP54-type protein, GTPase domain
APAR_RS04365	SM00963	SRP54-type protein, helical bundle domain
APAR_RS04370	SM00968	SMC proteins Flexible Hinge Domain
APAR_RS04375	SM00358	Double-stranded RNA binding motif
APAR_RS04375	SM00535	Ribonuclease III family
APAR_RS04415	SM00487	DEAD-like helicases superfamily
APAR_RS04415	SM00490	helicase superfamily c-terminal domain
APAR_RS04420	SM01120	APAR_RS04420
APAR_RS04420	SM01121	APAR_RS04420
APAR_RS04435	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
APAR_RS04440	SM00834	Putative regulatory protein
APAR_RS04460	SM00487	DEAD-like helicases superfamily
APAR_RS04460	SM00490	helicase superfamily c-terminal domain
APAR_RS04530	SM00347	helix_turn_helix multiple antibiotic resistance protein
APAR_RS04535	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04540	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04565	SM00357	Cold shock protein domain
APAR_RS04580	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04585	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APAR_RS04605	SM00481	DNA polymerase alpha chain like domain
APAR_RS04645	SM00729	Elongator protein 3, MiaB family, Radical SAM
APAR_RS04710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
APAR_RS04710	SM00331	Sigma factor PP2C-like phosphatases
APAR_RS04725	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04755	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
APAR_RS04780	SM01130	APAR_RS04780
APAR_RS04795	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04800	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04825	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APAR_RS04825	SM00465	GIY-YIG type nucleases (URI domain)
APAR_RS04865	SM00487	DEAD-like helicases superfamily
APAR_RS04865	SM00490	helicase superfamily c-terminal domain
APAR_RS04870	SM00028	Tetratricopeptide repeats
APAR_RS04915	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04920	SM00382	ATPases associated with a variety of cellular activities
APAR_RS04945	SM00316	Ribosomal protein S1-like RNA-binding domain
APAR_RS04980	SM00347	helix_turn_helix multiple antibiotic resistance protein
APAR_RS04995	SM00899	APAR_RS04995
APAR_RS05000	SM00899	APAR_RS05000
APAR_RS05060	SM00062	Bacterial periplasmic substrate-binding proteins
APAR_RS05080	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05210	SM00981	APAR_RS05210
APAR_RS05255	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS05315	SM00858	APAR_RS05315
APAR_RS05325	SM00831	Cation transporter/ATPase, N-terminus
APAR_RS05340	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05345	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05355	SM00448	cheY-homologous receiver domain
APAR_RS05355	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS05360	SM00387	Histidine kinase-like ATPases
APAR_RS05360	SM00388	His Kinase A (phosphoacceptor) domain
APAR_RS05365	SM00642	Alpha-amylase domain
APAR_RS05390	SM00642	Alpha-amylase domain
APAR_RS05405	SM00873	B3/4 domain
APAR_RS05405	SM00874	tRNA synthetase B5 domain
APAR_RS05405	SM00896	Ferredoxin-fold anticodon binding domain
APAR_RS05420	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS05450	SM00866	APAR_RS05450
APAR_RS05470	SM01323	APAR_RS05470
APAR_RS05530	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05540	SM00387	Histidine kinase-like ATPases
APAR_RS05545	SM00448	cheY-homologous receiver domain
APAR_RS05545	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS05555	SM00650	Ribosomal RNA adenine dimethylases
APAR_RS05600	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
APAR_RS05600	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
APAR_RS05600	SM00493	APAR_RS05600
APAR_RS05620	SM00028	Tetratricopeptide repeats
APAR_RS05655	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
APAR_RS05655	SM00475	5'-3' exonuclease
APAR_RS05655	SM00482	DNA polymerase A domain
APAR_RS05660	SM01230	APAR_RS05660
APAR_RS05690	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APAR_RS05690	SM00292	breast cancer carboxy-terminal domain
APAR_RS05690	SM00532	Ligase N family
APAR_RS05705	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05790	SM00382	ATPases associated with a variety of cellular activities
APAR_RS05800	SM00662	RNA polymerases D
APAR_RS05805	SM00363	S4 RNA-binding domain
APAR_RS05805	SM01390	APAR_RS05805
APAR_RS05825	SM00316	Ribosomal protein S1-like RNA-binding domain
APAR_RS05880	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
APAR_RS05885	SM01374	APAR_RS05885
APAR_RS05905	SM00322	K homology RNA-binding domain
APAR_RS05920	SM01382	APAR_RS05920
APAR_RS05920	SM01383	APAR_RS05920
APAR_RS05940	SM00226	Low molecular weight phosphatase family
APAR_RS05945	SM01403	APAR_RS05945
APAR_RS05950	SM00838	Elongation factor G C-terminus
APAR_RS05950	SM00889	Elongation factor G, domain IV
APAR_RS05975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
APAR_RS05980	SM00663	RNA polymerase I subunit A N-terminus
APAR_RS06005	SM00649	Ribosomal protein L11/L12
APAR_RS06010	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
APAR_RS06060	SM00967	RNA 2'-O ribose methyltransferase substrate binding
APAR_RS06065	SM00840	APAR_RS06065
APAR_RS06070	SM00382	ATPases associated with a variety of cellular activities
APAR_RS06090	SM00382	ATPases associated with a variety of cellular activities
APAR_RS06090	SM01086	C-terminal, D2-small domain, of ClpB protein
APAR_RS06115	SM00919	Malic enzyme, NAD binding domain
APAR_RS06115	SM01274	APAR_RS06115
APAR_RS06130	SM00831	Cation transporter/ATPase, N-terminus
APAR_RS06260	SM00354	helix_turn _helix lactose operon repressor
APAR_RS06295	SM00829	Enoylreductase
APAR_RS06320	SM00849	Metallo-beta-lactamase superfamily
APAR_RS06335	SM00387	Histidine kinase-like ATPases
APAR_RS06335	SM00388	His Kinase A (phosphoacceptor) domain
APAR_RS06340	SM00448	cheY-homologous receiver domain
APAR_RS06340	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS06350	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS06375	SM00986	Uracil DNA glycosylase superfamily
APAR_RS06375	SM00987	UreE urease accessory protein, C-terminal domain 
APAR_RS06380	SM01005	Alanine racemase, C-terminal domain
APAR_RS06425	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS06445	SM00635	Bacterial Ig-like domain 2
APAR_RS06445	SM00640	Glycosyl hydrolases family 32
APAR_RS06445	SM01208	APAR_RS06445
APAR_RS06455	SM00850	LytTr DNA-binding domain
APAR_RS06495	SM00849	Metallo-beta-lactamase superfamily
APAR_RS06520	SM00028	Tetratricopeptide repeats
APAR_RS06525	SM00316	Ribosomal protein S1-like RNA-binding domain
APAR_RS06525	SM00955	APAR_RS06525
APAR_RS06550	SM00382	ATPases associated with a variety of cellular activities
APAR_RS06560	SM01130	APAR_RS06560
APAR_RS06590	SM00420	helix_turn_helix, Deoxyribose operon repressor
APAR_RS06590	SM01134	APAR_RS06590
APAR_RS06600	SM00937	APAR_RS06600
APAR_RS06605	SM00957	SecA DEAD-like domain
APAR_RS06605	SM00958	SecA preprotein cross-linking domain
APAR_RS06640	SM00529	Helix-turn-helix diphteria tox regulatory element
APAR_RS06660	SM00382	ATPases associated with a variety of cellular activities
APAR_RS06715	SM00937	APAR_RS06715
APAR_RS06770	SM00014	Acid phosphatase homologues
APAR_RS06780	SM00448	cheY-homologous receiver domain
APAR_RS06780	SM00850	LytTr DNA-binding domain
APAR_RS06785	SM00387	Histidine kinase-like ATPases
APAR_RS06805	SM00890	Domain of unknown function
APAR_RS06815	SM00798	AICARFT/IMPCHase bienzyme
APAR_RS06815	SM00851	MGS-like domain
APAR_RS06830	SM00387	Histidine kinase-like ATPases
APAR_RS06830	SM00388	His Kinase A (phosphoacceptor) domain
APAR_RS06835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS06835	SM00866	APAR_RS06835
APAR_RS06845	SM00642	Alpha-amylase domain
APAR_RS06880	SM00220	Serine/Threonine protein kinases, catalytic domain
APAR_RS06885	SM00240	Forkhead associated domain
APAR_RS06890	SM00240	Forkhead associated domain
APAR_RS06895	SM00331	Sigma factor PP2C-like phosphatases
APAR_RS06895	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
APAR_RS06905	SM00220	Serine/Threonine protein kinases, catalytic domain
APAR_RS06905	SM00740	APAR_RS06905
APAR_RS06925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
APAR_RS06925	SM00387	Histidine kinase-like ATPases
APAR_RS06925	SM00388	His Kinase A (phosphoacceptor) domain
APAR_RS06930	SM00448	cheY-homologous receiver domain
APAR_RS06930	SM00862	Transcriptional regulatory protein, C terminal
APAR_RS06940	SM00998	Adenylosuccinate lyase C-terminus
APAR_RS06985	SM00479	APAR_RS06985
APAR_RS06985	SM00491	APAR_RS06985
APAR_RS06990	SM01209	APAR_RS06990
APAR_RS07005	SM00470	ParB-like nuclease domain
APAR_RS07020	SM00393	Putative single-stranded nucleic acids-binding domain
APAR_RS07030	SM01234	APAR_RS07030
APAR_RS07070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
APAR_RS07070	SM00866	APAR_RS07070
APAR_RS07090	SM00342	helix_turn_helix, arabinose operon control protein
APAR_RS07095	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS07100	SM00855	Phosphoglycerate mutase family
APAR_RS07105	SM00292	breast cancer carboxy-terminal domain
APAR_RS07105	SM00479	APAR_RS07105
APAR_RS07140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
APAR_RS07145	SM00342	helix_turn_helix, arabinose operon control protein
APAR_RS07165	SM00564	beta-propeller repeat
APAR_RS07190	SM00530	Helix-turn-helix XRE-family like proteins 
APAR_RS07205	SM00327	von Willebrand factor (vWF) type A domain
