locus-tag class description VY92_RS00005 PF01809 Putative membrane protein insertion efficiency factor VY92_RS00010 PF00825 Ribonuclease P VY92_RS00015 PF00468 Ribosomal protein L34 VY92_RS00020 PF11638 DnaA N-terminal domain VY92_RS00020 PF08299 Bacterial dnaA protein helix-turn-helix VY92_RS00020 PF00308 Bacterial dnaA protein VY92_RS00025 PF02768 DNA polymerase III beta subunit, C-terminal domain VY92_RS00025 PF02767 DNA polymerase III beta subunit, central domain VY92_RS00025 PF00712 DNA polymerase III beta subunit, N-terminal domain VY92_RS00030 PF02463 RecF/RecN/SMC N terminal domain VY92_RS00035 PF02592 Putative vitamin uptake transporter VY92_RS00040 PF11967 Recombination protein O N terminal VY92_RS00040 PF02565 Recombination protein O C terminal VY92_RS00045 PF05958 tRNA (Uracil-5-)-methyltransferase VY92_RS00045 PF01938 TRAM domain VY92_RS00050 PF04607 Region found in RelA / SpoT proteins VY92_RS00050 PF13291 ACT domain VY92_RS00050 PF02824 TGS domain VY92_RS00055 PF01219 Prokaryotic diacylglycerol kinase VY92_RS00060 PF17763 Glutaminase/Asparaginase C-terminal domain VY92_RS00060 PF00710 Asparaginase, N-terminal VY92_RS00070 PF02152 Dihydroneopterin aldolase VY92_RS00075 PF02660 Glycerol-3-phosphate acyltransferase VY92_RS00080 PF01327 Polypeptide deformylase VY92_RS00085 PF17358 Family of unknown function (DUF5384) VY92_RS00090 PF05433 Glycine zipper 2TM domain VY92_RS00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VY92_RS00095 PF00205 Thiamine pyrophosphate enzyme, central domain VY92_RS00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VY92_RS00100 PF01261 Xylose isomerase-like TIM barrel VY92_RS00105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VY92_RS00105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VY92_RS00110 PF02678 Pirin VY92_RS00110 PF05726 Pirin C-terminal cupin domain VY92_RS00115 PF03358 NADPH-dependent FMN reductase VY92_RS00120 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VY92_RS00120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VY92_RS00120 PF02769 AIR synthase related protein, C-terminal domain VY92_RS00125 PF00696 Amino acid kinase family VY92_RS00125 PF01472 PUA domain VY92_RS00130 PF00535 Glycosyl transferase family 2 VY92_RS00135 PF04932 O-Antigen ligase VY92_RS00140 PF09976 Tetratricopeptide repeat-like domain VY92_RS00145 PF03129 Anticodon binding domain VY92_RS00145 PF13393 Histidyl-tRNA synthetase VY92_RS00150 PF04551 GcpE protein VY92_RS00155 PF13464 Domain of unknown function (DUF4115) VY92_RS00160 PF03600 Citrate transporter VY92_RS00160 PF02080 TrkA-C domain VY92_RS00165 PF01066 CDP-alcohol phosphatidyltransferase VY92_RS00180 PF00994 Probable molybdopterin binding domain VY92_RS00185 PF00543 Nitrogen regulatory protein P-II VY92_RS00190 PF01594 AI-2E family transporter VY92_RS00195 PF04055 Radical SAM superfamily VY92_RS00205 PF02481 DNA recombination-mediator protein A VY92_RS00205 PF17782 DprA winged helix domain VY92_RS00215 PF00448 SRP54-type protein, GTPase domain VY92_RS00215 PF02881 SRP54-type protein, helical bundle domain VY92_RS00220 PF03009 Glycerophosphoryl diester phosphodiesterase family VY92_RS00225 PF07690 Major Facilitator Superfamily VY92_RS00230 PF01266 FAD dependent oxidoreductase VY92_RS00230 PF04324 BFD-like [2Fe-2S] binding domain VY92_RS00235 PF00890 FAD binding domain VY92_RS00240 PF02754 Cysteine-rich domain VY92_RS00240 PF13183 4Fe-4S dicluster domain VY92_RS00245 PF00455 DeoR C terminal sensor domain VY92_RS00245 PF08220 DeoR-like helix-turn-helix domain VY92_RS00250 PF01694 Rhomboid family VY92_RS00255 PF17364 Family of unknown function (DUF5389) VY92_RS00260 PF02222 ATP-grasp domain VY92_RS00260 PF01370 NAD dependent epimerase/dehydratase family VY92_RS00265 PF00579 tRNA synthetases class I (W and Y) VY92_RS00270 PF13419 Haloacid dehalogenase-like hydrolase VY92_RS00275 PF00834 Ribulose-phosphate 3 epimerase family VY92_RS00280 PF01810 LysE type translocator VY92_RS00285 PF01042 Endoribonuclease L-PSP VY92_RS00305 PF01063 Amino-transferase class IV VY92_RS00310 PF00425 chorismate binding enzyme VY92_RS00315 PF00117 Glutamine amidotransferase class-I VY92_RS00320 PF00210 Ferritin-like domain VY92_RS00330 PF01926 50S ribosome-binding GTPase VY92_RS00330 PF12631 MnmE helical domain VY92_RS00330 PF10396 GTP-binding protein TrmE N-terminus VY92_RS00335 PF01687 Riboflavin kinase VY92_RS00335 PF06574 FAD synthetase VY92_RS00340 PF08264 Anticodon-binding domain of tRNA VY92_RS00340 PF00133 tRNA synthetases class I (I, L, M and V) VY92_RS00345 PF01252 Signal peptidase (SPase) II VY92_RS00350 PF02401 LytB protein VY92_RS00360 PF00072 Response regulator receiver domain VY92_RS00360 PF00486 Transcriptional regulatory protein, C terminal VY92_RS00365 PF08521 Two-component sensor kinase N-terminal VY92_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS00365 PF00512 His Kinase A (phospho-acceptor) domain VY92_RS00380 PF00206 Lyase VY92_RS00380 PF14698 Argininosuccinate lyase C-terminal VY92_RS00385 PF00696 Amino acid kinase family VY92_RS00395 PF07687 Peptidase dimerisation domain VY92_RS00395 PF01546 Peptidase family M20/M25/M40 VY92_RS00470 PF01051 Initiator Replication protein VY92_RS00500 PF10876 Phage tail assemb.y chaperone protein, TAC VY92_RS00545 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) VY92_RS00555 PF04233 Phage Mu protein F like protein VY92_RS00560 PF06381 Protein of unknown function (DUF1073) VY92_RS00565 PF17288 Terminase RNAseH like domain VY92_RS00565 PF04466 Phage terminase large subunit VY92_RS00570 PF03592 Terminase small subunit VY92_RS00595 PF05106 Phage holin family (Lysis protein S) VY92_RS00620 PF10548 P22AR C-terminal domain VY92_RS00620 PF02498 BRO family, N-terminal domain VY92_RS00625 PF05772 NinB protein VY92_RS00660 PF01726 LexA DNA binding domain VY92_RS00660 PF00717 Peptidase S24-like VY92_RS00675 PF07411 Domain of unknown function (DUF1508) VY92_RS00730 PF02498 BRO family, N-terminal domain VY92_RS00730 PF10548 P22AR C-terminal domain VY92_RS00735 PF05772 NinB protein VY92_RS00785 PF05106 Phage holin family (Lysis protein S) VY92_RS00810 PF03592 Terminase small subunit VY92_RS00815 PF04466 Phage terminase large subunit VY92_RS00815 PF17288 Terminase RNAseH like domain VY92_RS01130 PF05840 Bacteriophage replication gene A protein (GPA) VY92_RS01170 PF00589 Phage integrase family VY92_RS01170 PF02899 Phage integrase, N-terminal SAM-like domain VY92_RS01175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VY92_RS01180 PF06508 Queuosine biosynthesis protein QueC VY92_RS01185 PF01242 6-pyruvoyl tetrahydropterin synthase VY92_RS01190 PF04055 Radical SAM superfamily VY92_RS01200 PF00005 ABC transporter VY92_RS01205 PF01061 ABC-2 type transporter VY92_RS01215 PF02563 Polysaccharide biosynthesis/export protein VY92_RS01220 PF00535 Glycosyl transferase family 2 VY92_RS01225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VY92_RS01225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VY92_RS01225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VY92_RS01240 PF00535 Glycosyl transferase family 2 VY92_RS01250 PF05159 Capsule polysaccharide biosynthesis protein VY92_RS01255 PF05159 Capsule polysaccharide biosynthesis protein VY92_RS01265 PF14743 DNA ligase OB-like domain VY92_RS01265 PF01068 ATP dependent DNA ligase domain VY92_RS01270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VY92_RS01275 PF01979 Amidohydrolase family VY92_RS01280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VY92_RS01285 PF00303 Thymidylate synthase VY92_RS01290 PF01790 Prolipoprotein diacylglyceryl transferase VY92_RS01295 PF01925 Sulfite exporter TauE/SafE VY92_RS01300 PF00293 NUDIX domain VY92_RS01310 PF01510 N-acetylmuramoyl-L-alanine amidase VY92_RS01315 PF07963 Prokaryotic N-terminal methylation motif VY92_RS01320 PF00437 Type II/IV secretion system protein VY92_RS01320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VY92_RS01325 PF00696 Amino acid kinase family VY92_RS01330 PF01765 Ribosome recycling factor VY92_RS01335 PF13288 DXP reductoisomerase C-terminal domain VY92_RS01335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VY92_RS01335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VY92_RS01340 PF01255 Putative undecaprenyl diphosphate synthase VY92_RS01350 PF02163 Peptidase family M50 VY92_RS01355 PF01103 Surface antigen VY92_RS01355 PF07244 Surface antigen variable number repeat VY92_RS01360 PF03938 Outer membrane protein (OmpH-like) VY92_RS01365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VY92_RS01365 PF00132 Bacterial transferase hexapeptide (six repeats) VY92_RS01370 PF07977 FabA-like domain VY92_RS01375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VY92_RS01375 PF00132 Bacterial transferase hexapeptide (six repeats) VY92_RS01380 PF02684 Lipid-A-disaccharide synthetase VY92_RS01385 PF01351 Ribonuclease HII VY92_RS01395 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VY92_RS01395 PF06144 DNA polymerase III, delta subunit VY92_RS01400 PF04390 Lipopolysaccharide-assembly VY92_RS01405 PF08264 Anticodon-binding domain of tRNA VY92_RS01405 PF00133 tRNA synthetases class I (I, L, M and V) VY92_RS01405 PF13603 Leucyl-tRNA synthetase, Domain 2 VY92_RS01410 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) VY92_RS01415 PF00149 Calcineurin-like phosphoesterase VY92_RS01420 PF00398 Ribosomal RNA adenine dimethylase VY92_RS01425 PF00639 PPIC-type PPIASE domain VY92_RS01425 PF09312 SurA N-terminal domain VY92_RS01430 PF00156 Phosphoribosyl transferase domain VY92_RS01435 PF00551 Formyl transferase VY92_RS01440 PF02769 AIR synthase related protein, C-terminal domain VY92_RS01440 PF00586 AIR synthase related protein, N-terminal domain VY92_RS01465 PF00929 Exonuclease VY92_RS01470 PF00075 RNase H VY92_RS01475 PF01238 Phosphomannose isomerase type I VY92_RS01480 PF06173 Protein of unknown function (DUF986) VY92_RS01485 PF03613 PTS system mannose/fructose/sorbose family IID component VY92_RS01490 PF03609 PTS system sorbose-specific iic component VY92_RS01495 PF03830 PTS system sorbose subfamily IIB component VY92_RS01495 PF03610 PTS system fructose IIA component VY92_RS01500 PF00482 Type II secretion system (T2SS), protein F VY92_RS01510 PF01121 Dephospho-CoA kinase VY92_RS01520 PF01235 Sodium:alanine symporter family VY92_RS01525 PF02627 Carboxymuconolactone decarboxylase family VY92_RS01530 PF02311 AraC-like ligand binding domain VY92_RS01530 PF12833 Helix-turn-helix domain VY92_RS01535 PF10063 Uncharacterized integral membrane protein (DUF2301) VY92_RS01540 PF05175 Methyltransferase small domain VY92_RS01540 PF08468 Methyltransferase small domain N-terminal VY92_RS01545 PF06472 ABC transporter transmembrane region 2 VY92_RS01545 PF00005 ABC transporter VY92_RS01550 PF02080 TrkA-C domain VY92_RS01550 PF06826 Predicted Permease Membrane Region VY92_RS01555 PF02462 Opacity family porin protein VY92_RS01560 PF01553 Acyltransferase VY92_RS01565 PF01726 LexA DNA binding domain VY92_RS01565 PF00717 Peptidase S24-like VY92_RS01570 PF00171 Aldehyde dehydrogenase family VY92_RS01570 PF00465 Iron-containing alcohol dehydrogenase VY92_RS01575 PF00578 AhpC/TSA family VY92_RS01580 PF00701 Dihydrodipicolinate synthetase family VY92_RS01585 PF06804 NlpB/DapX lipoprotein VY92_RS01590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VY92_RS01595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VY92_RS01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase VY92_RS01600 PF02190 ATP-dependent protease La (LON) substrate-binding domain VY92_RS01600 PF05362 Lon protease (S16) C-terminal proteolytic domain VY92_RS01600 PF00004 ATPase family associated with various cellular activities (AAA) VY92_RS01605 PF13145 PPIC-type PPIASE domain VY92_RS01610 PF00318 Ribosomal protein S2 VY92_RS01615 PF00889 Elongation factor TS VY92_RS01620 PF00009 Elongation factor Tu GTP binding domain VY92_RS01620 PF03144 Elongation factor Tu domain 2 VY92_RS01620 PF16658 Class II release factor RF3, C-terminal domain VY92_RS01625 PF01259 SAICAR synthetase VY92_RS01640 PF01370 NAD dependent epimerase/dehydratase family VY92_RS01645 PF00764 Arginosuccinate synthase VY92_RS01650 PF04393 Protein of unknown function (DUF535) VY92_RS01655 PF00675 Insulinase (Peptidase family M16) VY92_RS01655 PF05193 Peptidase M16 inactive domain VY92_RS01660 PF07715 TonB-dependent Receptor Plug Domain VY92_RS01665 PF02224 Cytidylate kinase VY92_RS01670 PF00575 S1 RNA binding domain VY92_RS01675 PF00216 Bacterial DNA-binding protein VY92_RS01680 PF06305 Lipopolysaccharide assembly protein A domain VY92_RS01685 PF18073 Rubredoxin metal binding domain VY92_RS01690 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VY92_RS01695 PF01253 Translation initiation factor SUI1 VY92_RS01700 PF14572 Phosphoribosyl synthetase-associated domain VY92_RS01700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VY92_RS01705 PF00288 GHMP kinases N terminal domain VY92_RS01705 PF08544 GHMP kinases C terminal VY92_RS01710 PF03550 Outer membrane lipoprotein LolB VY92_RS01715 PF00486 Transcriptional regulatory protein, C terminal VY92_RS01715 PF00072 Response regulator receiver domain VY92_RS01720 PF00464 Serine hydroxymethyltransferase VY92_RS01725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VY92_RS01725 PF02843 Phosphoribosylglycinamide synthetase, C domain VY92_RS01725 PF02844 Phosphoribosylglycinamide synthetase, N domain VY92_RS01735 PF02142 MGS-like domain VY92_RS01735 PF01808 AICARFT/IMPCHase bienzyme VY92_RS01740 PF07681 DoxX VY92_RS01745 PF05662 Coiled stalk of trimeric autotransporter adhesin VY92_RS01745 PF05658 Head domain of trimeric autotransporter adhesin VY92_RS01745 PF03895 YadA-like membrane anchor domain VY92_RS01745 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS01750 PF02683 Cytochrome C biogenesis protein transmembrane region VY92_RS01750 PF00085 Thioredoxin VY92_RS01750 PF11412 Disulphide bond corrector protein DsbC VY92_RS01755 PF01197 Ribosomal protein L31 VY92_RS01760 PF00444 Ribosomal protein L36 VY92_RS01765 PF00005 ABC transporter VY92_RS01770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VY92_RS01770 PF00005 ABC transporter VY92_RS01775 PF12911 N-terminal TM domain of oligopeptide transport permease C VY92_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS01785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VY92_RS01790 PF04317 YcjX-like family, DUF463 VY92_RS01795 PF05128 Domain of unknown function (DUF697) VY92_RS01800 PF00158 Sigma-54 interaction domain VY92_RS01800 PF18024 Helix-turn-helix domain VY92_RS01815 PF06071 Protein of unknown function (DUF933) VY92_RS01815 PF01926 50S ribosome-binding GTPase VY92_RS01820 PF01195 Peptidyl-tRNA hydrolase VY92_RS01825 PF03364 Polyketide cyclase / dehydrase and lipid transport VY92_RS01830 PF03658 RnfH family Ubiquitin VY92_RS01835 PF08007 Cupin superfamily protein VY92_RS01840 PF13742 OB-fold nucleic acid binding domain VY92_RS01840 PF02601 Exonuclease VII, large subunit VY92_RS01845 PF01668 SmpB protein VY92_RS01850 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VY92_RS01855 PF01551 Peptidase family M23 VY92_RS01855 PF04225 Opacity-associated protein A LysM-like domain VY92_RS01860 PF00005 ABC transporter VY92_RS01865 PF00950 ABC 3 transport family VY92_RS01870 PF00012 Hsp70 protein VY92_RS01875 PF00684 DnaJ central domain VY92_RS01875 PF01556 DnaJ C terminal domain VY92_RS01875 PF00226 DnaJ domain VY92_RS01880 PF05198 Translation initiation factor IF-3, N-terminal domain VY92_RS01880 PF00707 Translation initiation factor IF-3, C-terminal domain VY92_RS01885 PF01632 Ribosomal protein L35 VY92_RS01890 PF00453 Ribosomal protein L20 VY92_RS01895 PF00271 Helicase conserved C-terminal domain VY92_RS01895 PF00270 DEAD/DEAH box helicase VY92_RS01895 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VY92_RS01895 PF11898 Domain of unknown function (DUF3418) VY92_RS01895 PF04408 Helicase associated domain (HA2) VY92_RS01905 PF00939 Sodium:sulfate symporter transmembrane region VY92_RS01910 PF08267 Cobalamin-independent synthase, N-terminal domain VY92_RS01910 PF01717 Cobalamin-independent synthase, Catalytic domain VY92_RS01915 PF03466 LysR substrate binding domain VY92_RS01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS01920 PF03591 AzlC protein VY92_RS01925 PF05437 Branched-chain amino acid transport protein (AzlD) VY92_RS01930 PF00593 TonB dependent receptor VY92_RS01930 PF07715 TonB-dependent Receptor Plug Domain VY92_RS01940 PF04216 Protein involved in formate dehydrogenase formation VY92_RS01945 PF01292 Prokaryotic cytochrome b561 VY92_RS01950 PF09163 Formate dehydrogenase N, transmembrane VY92_RS01950 PF13247 4Fe-4S dicluster domain VY92_RS01960 PF02634 FdhD/NarQ family VY92_RS01970 PF04284 Protein of unknown function (DUF441) VY92_RS01975 PF13520 Amino acid permease VY92_RS01980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VY92_RS01980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VY92_RS01980 PF01276 Orn/Lys/Arg decarboxylase, major domain VY92_RS02050 PF03412 Peptidase C39 family VY92_RS02050 PF00005 ABC transporter VY92_RS02050 PF00664 ABC transporter transmembrane region VY92_RS02060 PF00999 Sodium/hydrogen exchanger family VY92_RS02065 PF03372 Endonuclease/Exonuclease/phosphatase family VY92_RS02070 PF01042 Endoribonuclease L-PSP VY92_RS02075 PF14256 YwiC-like protein VY92_RS02095 PF00145 C-5 cytosine-specific DNA methylase VY92_RS02135 PF04381 Putative exonuclease, RdgC VY92_RS02150 PF00436 Single-strand binding protein family VY92_RS02195 PF07411 Domain of unknown function (DUF1508) VY92_RS02210 PF01726 LexA DNA binding domain VY92_RS02210 PF00717 Peptidase S24-like VY92_RS02235 PF01695 IstB-like ATP binding protein VY92_RS02400 PF00293 NUDIX domain VY92_RS02400 PF03099 Biotin/lipoate A/B protein ligase family VY92_RS02425 PF00182 Chitinase class I VY92_RS02450 PF10549 ORF11CD3 domain VY92_RS02450 PF09669 Phage regulatory protein Rha (Phage_pRha) VY92_RS02485 PF00589 Phage integrase family VY92_RS02485 PF14659 Phage integrase, N-terminal SAM-like domain VY92_RS02485 PF13356 Arm DNA-binding domain VY92_RS02490 PF00117 Glutamine amidotransferase class-I VY92_RS02490 PF00958 GMP synthase C terminal domain VY92_RS02490 PF02540 NAD synthase VY92_RS02505 PF00478 IMP dehydrogenase / GMP reductase domain VY92_RS02505 PF00571 CBS domain VY92_RS02510 PF03099 Biotin/lipoate A/B protein ligase family VY92_RS02510 PF02237 Biotin protein ligase C terminal domain VY92_RS02520 PF07411 Domain of unknown function (DUF1508) VY92_RS02525 PF00290 Tryptophan synthase alpha chain VY92_RS02530 PF00291 Pyridoxal-phosphate dependent enzyme VY92_RS02535 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VY92_RS02535 PF00218 Indole-3-glycerol phosphate synthase VY92_RS02540 PF00591 Glycosyl transferase family, a/b domain VY92_RS02540 PF02885 Glycosyl transferase family, helical bundle domain VY92_RS02545 PF14552 Tautomerase enzyme VY92_RS02550 PF00117 Glutamine amidotransferase class-I VY92_RS02555 PF00425 chorismate binding enzyme VY92_RS02555 PF04715 Anthranilate synthase component I, N terminal region VY92_RS02560 PF00206 Lyase VY92_RS02560 PF10415 Fumarase C C-terminus VY92_RS02565 PF04364 DNA polymerase III chi subunit, HolC VY92_RS02570 PF13673 Acetyltransferase (GNAT) domain VY92_RS02580 PF06414 Zeta toxin VY92_RS02585 PF00145 C-5 cytosine-specific DNA methylase VY92_RS02595 PF10458 Valyl tRNA synthetase tRNA binding arm VY92_RS02595 PF08264 Anticodon-binding domain of tRNA VY92_RS02595 PF00133 tRNA synthetases class I (I, L, M and V) VY92_RS02600 PF01066 CDP-alcohol phosphatidyltransferase VY92_RS02605 PF02525 Flavodoxin-like fold VY92_RS02620 PF07690 Major Facilitator Superfamily VY92_RS02635 PF01965 DJ-1/PfpI family VY92_RS02640 PF00106 short chain dehydrogenase VY92_RS02645 PF00893 Small Multidrug Resistance protein VY92_RS02655 PF04247 Invasion gene expression up-regulator, SirB VY92_RS02660 PF00521 DNA gyrase/topoisomerase IV, subunit A VY92_RS02660 PF03989 DNA gyrase C-terminal domain, beta-propeller VY92_RS02670 PF01475 Ferric uptake regulator family VY92_RS02675 PF00258 Flavodoxin VY92_RS02680 PF01402 Ribbon-helix-helix protein, copG family VY92_RS02685 PF00561 alpha/beta hydrolase fold VY92_RS02690 PF03925 SeqA protein C-terminal domain VY92_RS02690 PF17206 SeqA protein N-terminal domain VY92_RS02695 PF00501 AMP-binding enzyme VY92_RS02700 PF00924 Mechanosensitive ion channel VY92_RS02700 PF12795 Mechanosensitive ion channel porin domain VY92_RS02700 PF12794 Mechanosensitive ion channel inner membrane domain 1 VY92_RS02705 PF01264 Chorismate synthase VY92_RS02710 PF03411 Penicillin-insensitive murein endopeptidase VY92_RS02715 PF01925 Sulfite exporter TauE/SafE VY92_RS02720 PF03279 Bacterial lipid A biosynthesis acyltransferase VY92_RS02725 PF00156 Phosphoribosyl transferase domain VY92_RS02730 PF12170 DNA polymerase III tau subunit V interacting with alpha VY92_RS02730 PF12169 DNA polymerase III subunits gamma and tau domain III VY92_RS02735 PF02554 Carbon starvation protein CstA VY92_RS02740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VY92_RS02740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VY92_RS02745 PF00392 Bacterial regulatory proteins, gntR family VY92_RS02745 PF07729 FCD domain VY92_RS02750 PF00005 ABC transporter VY92_RS02750 PF17912 MalK OB fold domain VY92_RS02750 PF03459 TOBE domain VY92_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VY92_RS02770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VY92_RS02780 PF00390 Malic enzyme, N-terminal domain VY92_RS02780 PF03949 Malic enzyme, NAD binding domain VY92_RS02785 PF01638 HxlR-like helix-turn-helix VY92_RS02795 PF13416 Bacterial extracellular solute-binding protein VY92_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02805 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02810 PF08402 TOBE domain VY92_RS02810 PF00005 ABC transporter VY92_RS02815 PF01546 Peptidase family M20/M25/M40 VY92_RS02815 PF07687 Peptidase dimerisation domain VY92_RS02820 PF03710 Glutamate-ammonia ligase adenylyltransferase VY92_RS02820 PF08335 GlnD PII-uridylyltransferase VY92_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02835 PF00005 ABC transporter VY92_RS02840 PF06968 Biotin and Thiamin Synthesis associated domain VY92_RS02840 PF04055 Radical SAM superfamily VY92_RS02845 PF00027 Cyclic nucleotide-binding domain VY92_RS02850 PF01925 Sulfite exporter TauE/SafE VY92_RS02860 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VY92_RS02860 PF09093 Lyase, catalytic VY92_RS02860 PF09092 Lyase, N terminal VY92_RS02860 PF02278 Polysaccharide lyase family 8, super-sandwich domain VY92_RS02865 PF03616 Sodium/glutamate symporter VY92_RS02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS02870 PF03459 TOBE domain VY92_RS02880 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS02885 PF03459 TOBE domain VY92_RS02885 PF00005 ABC transporter VY92_RS02890 PF03485 Arginyl tRNA synthetase N terminal domain VY92_RS02890 PF00750 tRNA synthetases class I (R) VY92_RS02890 PF05746 DALR anticodon binding domain VY92_RS02895 PF06185 YecM protein VY92_RS02900 PF03796 DnaB-like helicase C terminal domain VY92_RS02900 PF00772 DnaB-like helicase N terminal domain VY92_RS02905 PF00842 Alanine racemase, C-terminal domain VY92_RS02905 PF01168 Alanine racemase, N-terminal domain VY92_RS02910 PF00342 Phosphoglucose isomerase VY92_RS02920 PF00717 Peptidase S24-like VY92_RS02925 PF00375 Sodium:dicarboxylate symporter family VY92_RS02930 PF13609 Gram-negative porin VY92_RS02935 PF13609 Gram-negative porin VY92_RS02940 PF13609 Gram-negative porin VY92_RS02950 PF13649 Methyltransferase domain VY92_RS02955 PF04221 RelB antitoxin VY92_RS02960 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ VY92_RS02965 PF02938 GAD domain VY92_RS02965 PF00152 tRNA synthetases class II (D, K and N) VY92_RS02965 PF01336 OB-fold nucleic acid binding domain VY92_RS02970 PF00293 NUDIX domain VY92_RS02975 PF01709 Transcriptional regulator VY92_RS02980 PF02075 Crossover junction endodeoxyribonuclease RuvC VY92_RS02985 PF01330 RuvA N terminal domain VY92_RS02985 PF07499 RuvA, C-terminal domain VY92_RS02990 PF05491 RuvB C-terminal winged helix domain VY92_RS02990 PF05496 Holliday junction DNA helicase RuvB P-loop domain VY92_RS02990 PF17864 RuvB AAA lid domain VY92_RS02995 PF02595 Glycerate kinase family VY92_RS03000 PF02447 GntP family permease VY92_RS03005 PF05651 Putative sugar diacid recognition VY92_RS03005 PF13556 PucR C-terminal helix-turn-helix domain VY92_RS03005 PF17853 GGDEF-like domain VY92_RS03010 PF00312 Ribosomal protein S15 VY92_RS03015 PF00155 Aminotransferase class I and II VY92_RS03020 PF02222 ATP-grasp domain VY92_RS03020 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VY92_RS03025 PF00484 Carbonic anhydrase VY92_RS03030 PF01384 Phosphate transporter family VY92_RS03035 PF01865 Protein of unknown function DUF47 VY92_RS03040 PF01928 CYTH domain VY92_RS03045 PF18073 Rubredoxin metal binding domain VY92_RS03050 PF02395 Immunoglobulin A1 protease VY92_RS03050 PF03212 Pertactin VY92_RS03050 PF03797 Autotransporter beta-domain VY92_RS03060 PF02581 Thiamine monophosphate synthase VY92_RS03065 PF08543 Phosphomethylpyrimidine kinase VY92_RS03070 PF02110 Hydroxyethylthiazole kinase family VY92_RS03075 PF00753 Metallo-beta-lactamase superfamily VY92_RS03075 PF03772 Competence protein VY92_RS03075 PF13567 Domain of unknown function (DUF4131) VY92_RS03080 PF00664 ABC transporter transmembrane region VY92_RS03080 PF00005 ABC transporter VY92_RS03085 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VY92_RS03090 PF03966 Trm112p-like protein VY92_RS03095 PF02348 Cytidylyltransferase VY92_RS03100 PF09084 NMT1/THI5 like VY92_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS03110 PF00005 ABC transporter VY92_RS03115 PF01541 GIY-YIG catalytic domain VY92_RS03115 PF02151 UvrB/uvrC motif VY92_RS03115 PF08459 UvrC Helix-hairpin-helix N-terminal VY92_RS03120 PF09335 SNARE associated Golgi protein VY92_RS03125 PF01386 Ribosomal L25p family VY92_RS03130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VY92_RS03130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VY92_RS03135 PF01554 MatE VY92_RS03140 PF00677 Lumazine binding domain VY92_RS03150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VY92_RS03165 PF00925 GTP cyclohydrolase II VY92_RS03170 PF01569 PAP2 superfamily VY92_RS03175 PF00480 ROK family VY92_RS03190 PF01235 Sodium:alanine symporter family VY92_RS03205 PF17384 RimP C-terminal SH3 domain VY92_RS03205 PF02576 RimP N-terminal domain VY92_RS03210 PF00575 S1 RNA binding domain VY92_RS03210 PF13184 NusA-like KH domain VY92_RS03210 PF08529 NusA N-terminal domain VY92_RS03215 PF00009 Elongation factor Tu GTP binding domain VY92_RS03215 PF11987 Translation-initiation factor 2 VY92_RS03215 PF04760 Translation initiation factor IF-2, N-terminal region VY92_RS03215 PF08364 Bacterial translation initiation factor IF-2 associated region VY92_RS03220 PF11742 Protein of unknown function (DUF3302) VY92_RS03225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VY92_RS03225 PF00529 HlyD membrane-fusion protein of T1SS VY92_RS03230 PF02033 Ribosome-binding factor A VY92_RS03235 PF01509 TruB family pseudouridylate synthase (N terminal domain) VY92_RS03235 PF16198 tRNA pseudouridylate synthase B C-terminal domain VY92_RS03235 PF09157 Pseudouridine synthase II TruB, C-terminal VY92_RS03240 PF06434 Aconitate hydratase 2 N-terminus VY92_RS03240 PF00330 Aconitase family (aconitate hydratase) VY92_RS03240 PF11791 Aconitate B N-terminal domain VY92_RS03245 PF03795 YCII-related domain VY92_RS03250 PF03061 Thioesterase superfamily VY92_RS03255 PF04279 Intracellular septation protein A VY92_RS03265 PF03922 OmpW family VY92_RS03270 PF00762 Ferrochelatase VY92_RS03275 PF03061 Thioesterase superfamily VY92_RS03280 PF13183 4Fe-4S dicluster domain VY92_RS03280 PF01565 FAD binding domain VY92_RS03280 PF02913 FAD linked oxidases, C-terminal domain VY92_RS03285 PF00691 OmpA family VY92_RS03285 PF01389 OmpA-like transmembrane domain VY92_RS03290 PF04011 LemA family VY92_RS03305 PF00462 Glutaredoxin VY92_RS03335 PF08239 Bacterial SH3 domain VY92_RS03340 PF01966 HD domain VY92_RS03340 PF12627 Probable RNA and SrmB- binding site of polymerase A VY92_RS03340 PF01743 Poly A polymerase head domain VY92_RS03345 PF08942 Domain of unknown function (DUF1919) VY92_RS03350 PF02682 Carboxyltransferase domain, subdomain C and D VY92_RS03355 PF02626 Carboxyltransferase domain, subdomain A and B VY92_RS03360 PF03746 LamB/YcsF family VY92_RS03365 PF01566 Natural resistance-associated macrophage protein VY92_RS03375 PF13419 Haloacid dehalogenase-like hydrolase VY92_RS03380 PF02219 Methylenetetrahydrofolate reductase VY92_RS03390 PF03372 Endonuclease/Exonuclease/phosphatase family VY92_RS03395 PF00072 Response regulator receiver domain VY92_RS03395 PF00196 Bacterial regulatory proteins, luxR family VY92_RS03400 PF02525 Flavodoxin-like fold VY92_RS03405 PF08496 Peptidase family S49 N-terminal VY92_RS03405 PF01343 Peptidase family S49 VY92_RS03415 PF00149 Calcineurin-like phosphoesterase VY92_RS03420 PF02867 Ribonucleotide reductase, barrel domain VY92_RS03420 PF03477 ATP cone domain VY92_RS03420 PF00317 Ribonucleotide reductase, all-alpha domain VY92_RS03425 PF06965 Na+/H+ antiporter 1 VY92_RS03430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VY92_RS03435 PF00578 AhpC/TSA family VY92_RS03440 PF13307 Helicase C-terminal domain VY92_RS03440 PF06733 DEAD_2 VY92_RS03445 PF00814 Glycoprotease family VY92_RS03450 PF13193 AMP-binding enzyme C-terminal domain VY92_RS03450 PF00501 AMP-binding enzyme VY92_RS03455 PF01612 3'-5' exonuclease VY92_RS03455 PF00570 HRDC domain VY92_RS03470 PF00664 ABC transporter transmembrane region VY92_RS03470 PF00005 ABC transporter VY92_RS03475 PF00664 ABC transporter transmembrane region VY92_RS03475 PF00005 ABC transporter VY92_RS03480 PF07992 Pyridine nucleotide-disulphide oxidoreductase VY92_RS03490 PF02447 GntP family permease VY92_RS03495 PF01202 Shikimate kinase VY92_RS03505 PF00209 Sodium:neurotransmitter symporter family VY92_RS03510 PF10576 Iron-sulfur binding domain of endonuclease III VY92_RS03510 PF00730 HhH-GPD superfamily base excision DNA repair protein VY92_RS03510 PF00633 Helix-hairpin-helix motif VY92_RS03515 PF02508 Rnf-Nqr subunit, membrane protein VY92_RS03520 PF04205 FMN-binding domain VY92_RS03525 PF03116 NQR2, RnfD, RnfE family VY92_RS03530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VY92_RS03530 PF13375 RnfC Barrel sandwich hybrid domain VY92_RS03530 PF13237 4Fe-4S dicluster domain VY92_RS03535 PF04060 Putative Fe-S cluster VY92_RS03540 PF02508 Rnf-Nqr subunit, membrane protein VY92_RS03545 PF01370 NAD dependent epimerase/dehydratase family VY92_RS03545 PF08338 Domain of unknown function (DUF1731) VY92_RS03550 PF02863 Arginine repressor, C-terminal domain VY92_RS03550 PF01316 Arginine repressor, DNA binding domain VY92_RS03555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VY92_RS03555 PF00056 lactate/malate dehydrogenase, NAD binding domain VY92_RS03570 PF01380 SIS domain VY92_RS03570 PF00571 CBS domain VY92_RS03580 PF05175 Methyltransferase small domain VY92_RS03585 PF01713 Smr domain VY92_RS03590 PF01416 tRNA pseudouridine synthase VY92_RS03595 PF17848 Acetyl-coA carboxylase zinc finger domain VY92_RS03595 PF01039 Carboxyl transferase domain VY92_RS03600 PF08245 Mur ligase middle domain VY92_RS03605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VY92_RS03605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VY92_RS03610 PF03701 Uncharacterised protein family (UPF0181) VY92_RS03615 PF00313 'Cold-shock' DNA-binding domain VY92_RS03630 PF00356 Bacterial regulatory proteins, lacI family VY92_RS03630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VY92_RS03635 PF02769 AIR synthase related protein, C-terminal domain VY92_RS03635 PF00586 AIR synthase related protein, N-terminal domain VY92_RS03640 PF06303 MatP N-terminal domain VY92_RS03640 PF17414 MatP C-terminal ribbon-helix-helix domain VY92_RS03645 PF13654 AAA domain VY92_RS03645 PF05362 Lon protease (S16) C-terminal proteolytic domain VY92_RS03650 PF07977 FabA-like domain VY92_RS03655 PF04073 Aminoacyl-tRNA editing domain VY92_RS03665 PF00860 Permease family VY92_RS03670 PF02635 DsrE/DsrF-like family VY92_RS03675 PF13361 UvrD-like helicase C-terminal domain VY92_RS03675 PF12705 PD-(D/E)XK nuclease superfamily VY92_RS03675 PF00580 UvrD/REP helicase N-terminal domain VY92_RS03680 PF13538 UvrD-like helicase C-terminal domain VY92_RS03685 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS03685 PF03895 YadA-like membrane anchor domain VY92_RS03685 PF05662 Coiled stalk of trimeric autotransporter adhesin VY92_RS03685 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin VY92_RS03690 PF00152 tRNA synthetases class II (D, K and N) VY92_RS03690 PF01336 OB-fold nucleic acid binding domain VY92_RS03695 PF01047 MarR family VY92_RS03695 PF00480 ROK family VY92_RS03705 PF00551 Formyl transferase VY92_RS03705 PF01842 ACT domain VY92_RS03710 PF00300 Histidine phosphatase superfamily (branch 1) VY92_RS03715 PF13396 Phospholipase_D-nuclease N-terminal VY92_RS03715 PF13091 PLD-like domain VY92_RS03720 PF00849 RNA pseudouridylate synthase VY92_RS03725 PF01409 tRNA synthetases class II core domain (F) VY92_RS03725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VY92_RS03730 PF03484 tRNA synthetase B5 domain VY92_RS03730 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VY92_RS03730 PF03483 B3/4 domain VY92_RS03730 PF03147 Ferredoxin-fold anticodon binding domain VY92_RS03730 PF01588 Putative tRNA binding domain VY92_RS03735 PF00216 Bacterial DNA-binding protein VY92_RS03740 PF00877 NlpC/P60 family VY92_RS03745 PF03797 Autotransporter beta-domain VY92_RS03755 PF01171 PP-loop family VY92_RS03760 PF17192 MukF middle domain VY92_RS03760 PF03882 MukF winged-helix domain VY92_RS03760 PF17193 MukF C-terminal domain VY92_RS03765 PF04288 MukE-like family VY92_RS03770 PF04310 MukB N-terminal VY92_RS03770 PF16330 MukB hinge domain VY92_RS03780 PF00929 Exonuclease VY92_RS03780 PF08411 Exonuclease C-terminal VY92_RS03795 PF12762 ISXO2-like transposase domain VY92_RS03800 PF04386 Stringent starvation protein B VY92_RS03805 PF13417 Glutathione S-transferase, N-terminal domain VY92_RS03805 PF00043 Glutathione S-transferase, C-terminal domain VY92_RS03810 PF00380 Ribosomal protein S9/S16 VY92_RS03815 PF00572 Ribosomal protein L13 VY92_RS03820 PF00849 RNA pseudouridylate synthase VY92_RS03825 PF04287 tRNA pseudouridine synthase C VY92_RS03830 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VY92_RS03840 PF14489 QueF-like protein VY92_RS03840 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VY92_RS03845 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VY92_RS03845 PF11892 Domain of unknown function (DUF3412) VY92_RS03845 PF03641 Possible lysine decarboxylase VY92_RS03850 PF08681 Protein of unknown function (DUF1778) VY92_RS03860 PF00535 Glycosyl transferase family 2 VY92_RS03865 PF01061 ABC-2 type transporter VY92_RS03870 PF00005 ABC transporter VY92_RS03875 PF04315 Elongation factor P hydroxylase VY92_RS03880 PF01435 Peptidase family M48 VY92_RS03885 PF00817 impB/mucB/samB family VY92_RS03885 PF11798 IMS family HHH motif VY92_RS03890 PF00343 Carbohydrate phosphorylase VY92_RS03895 PF00534 Glycosyl transferases group 1 VY92_RS03895 PF08323 Starch synthase catalytic domain VY92_RS03900 PF00483 Nucleotidyl transferase VY92_RS03905 PF18390 Glycogen debranching enzyme C-terminal domain VY92_RS03905 PF00128 Alpha amylase, catalytic domain VY92_RS03905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VY92_RS03910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VY92_RS03910 PF02806 Alpha amylase, C-terminal all-beta domain VY92_RS03910 PF00128 Alpha amylase, catalytic domain VY92_RS03915 PF02446 4-alpha-glucanotransferase VY92_RS03920 PF05656 Protein of unknown function (DUF805) VY92_RS03930 PF00749 tRNA synthetases class I (E and Q), catalytic domain VY92_RS03930 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VY92_RS03940 PF12704 MacB-like periplasmic core domain VY92_RS03940 PF00005 ABC transporter VY92_RS03940 PF02687 FtsX-like permease family VY92_RS03945 PF02321 Outer membrane efflux protein VY92_RS03955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VY92_RS03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase VY92_RS03960 PF02817 e3 binding domain VY92_RS03960 PF00364 Biotin-requiring enzyme VY92_RS03960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VY92_RS03965 PF00456 Transketolase, thiamine diphosphate binding domain VY92_RS03965 PF17831 Pyruvate dehydrogenase E1 component middle domain VY92_RS03970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VY92_RS03975 PF00391 PEP-utilising enzyme, mobile domain VY92_RS03975 PF05524 PEP-utilising enzyme, N-terminal VY92_RS03975 PF02896 PEP-utilising enzyme, TIM barrel domain VY92_RS03980 PF00381 PTS HPr component phosphorylation site VY92_RS03985 PF03193 RsgA GTPase VY92_RS03990 PF00929 Exonuclease VY92_RS04005 PF03462 PCRF domain VY92_RS04005 PF00472 RF-1 domain VY92_RS04010 PF02403 Seryl-tRNA synthetase N-terminal domain VY92_RS04010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VY92_RS04015 PF00004 ATPase family associated with various cellular activities (AAA) VY92_RS04015 PF16193 AAA C-terminal domain VY92_RS04015 PF12002 MgsA AAA+ ATPase C terminal VY92_RS04030 PF03548 Outer membrane lipoprotein carrier protein LolA VY92_RS04035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VY92_RS04035 PF01580 FtsK/SpoIIIE family VY92_RS04035 PF17854 FtsK alpha domain VY92_RS04035 PF09397 Ftsk gamma domain VY92_RS04040 PF01037 Lrp/AsnC ligand binding domain VY92_RS04045 PF13286 Phosphohydrolase-associated domain VY92_RS04045 PF01966 HD domain VY92_RS04050 PF04172 LrgB-like family VY92_RS04055 PF03788 LrgA family VY92_RS04060 PF00565 Staphylococcal nuclease homologue VY92_RS04065 PF00266 Aminotransferase class-V VY92_RS04070 PF02657 Fe-S metabolism associated domain VY92_RS04075 PF16036 Chalcone isomerase-like VY92_RS04080 PF05728 Uncharacterised protein family (UPF0227) VY92_RS04085 PF08443 RimK-like ATP-grasp domain VY92_RS04085 PF18030 RimK PreATP-grasp domain VY92_RS04090 PF00462 Glutaredoxin VY92_RS04095 PF00583 Acetyltransferase (GNAT) family VY92_RS04095 PF00696 Amino acid kinase family VY92_RS04100 PF00171 Aldehyde dehydrogenase family VY92_RS04105 PF01258 Prokaryotic dksA/traR C4-type zinc finger VY92_RS04110 PF01743 Poly A polymerase head domain VY92_RS04110 PF12626 Polymerase A arginine-rich C-terminus VY92_RS04110 PF12627 Probable RNA and SrmB- binding site of polymerase A VY92_RS04115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VY92_RS04120 PF02568 Thiamine biosynthesis protein (ThiI) VY92_RS04120 PF02926 THUMP domain VY92_RS04130 PF00348 Polyprenyl synthetase VY92_RS04135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VY92_RS04135 PF02779 Transketolase, pyrimidine binding domain VY92_RS04135 PF02780 Transketolase, C-terminal domain VY92_RS04140 PF01985 CRS1 / YhbY (CRM) domain VY92_RS04145 PF03449 Transcription elongation factor, N-terminal VY92_RS04145 PF01272 Transcription elongation factor, GreA/GreB, C-term VY92_RS04150 PF03473 MOSC domain VY92_RS04150 PF00111 2Fe-2S iron-sulfur cluster binding domain VY92_RS04150 PF03476 MOSC N-terminal beta barrel domain VY92_RS04160 PF01817 Chorismate mutase type II VY92_RS04160 PF02153 Prephenate dehydrogenase VY92_RS04165 PF00793 DAHP synthetase I family VY92_RS04170 PF02811 PHP domain VY92_RS04175 PF01180 Dihydroorotate dehydrogenase VY92_RS04180 PF11940 Domain of unknown function (DUF3458) Ig-like fold VY92_RS04180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VY92_RS04180 PF01433 Peptidase family M1 domain VY92_RS04185 PF00731 AIR carboxylase VY92_RS04230 PF02441 Flavoprotein VY92_RS04235 PF00156 Phosphoribosyl transferase domain VY92_RS04240 PF02674 Colicin V production protein VY92_RS04245 PF04217 Protein of unknown function, DUF412 VY92_RS04250 PF00871 Acetokinase family VY92_RS04255 PF01515 Phosphate acetyl/butaryl transferase VY92_RS04255 PF07085 DRTGG domain VY92_RS04265 PF13953 PapC C-terminal domain VY92_RS04265 PF00577 Outer membrane usher protein VY92_RS04265 PF13954 PapC N-terminal domain VY92_RS04270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VY92_RS04270 PF02753 Pili assembly chaperone PapD, C-terminal domain VY92_RS04275 PF16970 Type-1 fimbrial protein, A VY92_RS04280 PF00924 Mechanosensitive ion channel VY92_RS04280 PF05552 Conserved TM helix VY92_RS04285 PF03739 Lipopolysaccharide export system permease LptF/LptG VY92_RS04290 PF03739 Lipopolysaccharide export system permease LptF/LptG VY92_RS04295 PF00883 Cytosol aminopeptidase family, catalytic domain VY92_RS04295 PF02789 Cytosol aminopeptidase family, N-terminal domain VY92_RS04310 PF01488 Shikimate / quinate 5-dehydrogenase VY92_RS04310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VY92_RS04310 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VY92_RS04315 PF16123 Hydroxyacylglutathione hydrolase C-terminus VY92_RS04315 PF00753 Metallo-beta-lactamase superfamily VY92_RS04320 PF08241 Methyltransferase domain VY92_RS04325 PF18381 YcaO cyclodehydratase C-terminal domain VY92_RS04325 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding VY92_RS04330 PF06295 Protein of unknown function (DUF1043) VY92_RS04335 PF00268 Ribonucleotide reductase, small chain VY92_RS04350 PF00111 2Fe-2S iron-sulfur cluster binding domain VY92_RS04355 PF05173 Dihydrodipicolinate reductase, C-terminus VY92_RS04355 PF01113 Dihydrodipicolinate reductase, N-terminus VY92_RS04360 PF01810 LysE type translocator VY92_RS04365 PF04608 Phosphatidylglycerophosphatase A VY92_RS04370 PF02769 AIR synthase related protein, C-terminal domain VY92_RS04370 PF00586 AIR synthase related protein, N-terminal domain VY92_RS04375 PF01029 NusB family VY92_RS04380 PF00885 6,7-dimethyl-8-ribityllumazine synthase VY92_RS04385 PF03222 Tryptophan/tyrosine permease family VY92_RS04395 PF00300 Histidine phosphatase superfamily (branch 1) VY92_RS04400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VY92_RS04400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VY92_RS04400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VY92_RS04400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VY92_RS04405 PF00809 Pterin binding enzyme VY92_RS04415 PF13180 PDZ domain VY92_RS04420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VY92_RS04420 PF01872 RibD C-terminal domain VY92_RS04425 PF03477 ATP cone domain VY92_RS04430 PF03848 Tellurite resistance protein TehB VY92_RS04430 PF09313 Domain of unknown function (DUF1971) VY92_RS04460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VY92_RS04460 PF02824 TGS domain VY92_RS04460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VY92_RS04460 PF03129 Anticodon binding domain VY92_RS04465 PF13417 Glutathione S-transferase, N-terminal domain VY92_RS04465 PF04399 Glutaredoxin 2, C terminal domain VY92_RS04505 PF13356 Arm DNA-binding domain VY92_RS04505 PF00589 Phage integrase family VY92_RS04515 PF03881 Fructosamine kinase VY92_RS04525 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) VY92_RS04530 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) VY92_RS04535 PF00271 Helicase conserved C-terminal domain VY92_RS04535 PF12344 Ultra-violet resistance protein B VY92_RS04535 PF02151 UvrB/uvrC motif VY92_RS04535 PF04851 Type III restriction enzyme, res subunit VY92_RS04535 PF17757 UvrB interaction domain VY92_RS04545 PF01699 Sodium/calcium exchanger protein VY92_RS04550 PF03824 High-affinity nickel-transport protein VY92_RS04555 PF06226 Protein of unknown function (DUF1007) VY92_RS04560 PF00005 ABC transporter VY92_RS04560 PF12848 ABC transporter VY92_RS04565 PF07687 Peptidase dimerisation domain VY92_RS04565 PF01546 Peptidase family M20/M25/M40 VY92_RS04575 PF00356 Bacterial regulatory proteins, lacI family VY92_RS04580 PF00294 pfkB family carbohydrate kinase VY92_RS04585 PF07670 Nucleoside recognition VY92_RS04585 PF01773 Na+ dependent nucleoside transporter N-terminus VY92_RS04585 PF07662 Na+ dependent nucleoside transporter C-terminus VY92_RS04590 PF01156 Inosine-uridine preferring nucleoside hydrolase VY92_RS04595 PF00595 PDZ domain VY92_RS04600 PF01027 Inhibitor of apoptosis-promoting Bax1 VY92_RS04605 PF04358 DsrC like protein VY92_RS04610 PF01297 Zinc-uptake complex component A periplasmic VY92_RS04615 PF00005 ABC transporter VY92_RS04620 PF00950 ABC 3 transport family VY92_RS04625 PF00950 ABC 3 transport family VY92_RS04630 PF00561 alpha/beta hydrolase fold VY92_RS04635 PF02698 DUF218 domain VY92_RS04640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VY92_RS04640 PF00356 Bacterial regulatory proteins, lacI family VY92_RS04645 PF00793 DAHP synthetase I family VY92_RS04650 PF12704 MacB-like periplasmic core domain VY92_RS04650 PF02687 FtsX-like permease family VY92_RS04655 PF00005 ABC transporter VY92_RS04660 PF12704 MacB-like periplasmic core domain VY92_RS04660 PF02687 FtsX-like permease family VY92_RS04665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VY92_RS04665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VY92_RS04670 PF00793 DAHP synthetase I family VY92_RS04675 PF13369 Transglutaminase-like superfamily VY92_RS04680 PF13847 Methyltransferase domain VY92_RS04680 PF17827 PrmC N-terminal domain VY92_RS04685 PF00004 ATPase family associated with various cellular activities (AAA) VY92_RS04685 PF06480 FtsH Extracellular VY92_RS04685 PF01434 Peptidase family M41 VY92_RS04685 PF17862 AAA+ lid domain VY92_RS04690 PF01728 FtsJ-like methyltransferase VY92_RS04695 PF12805 FUSC-like inner membrane protein yccS VY92_RS04700 PF02142 MGS-like domain VY92_RS04705 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VY92_RS04710 PF02391 MoaE protein VY92_RS04715 PF02597 ThiS family VY92_RS04720 PF01967 MoaC family VY92_RS04725 PF04055 Radical SAM superfamily VY92_RS04725 PF06463 Molybdenum Cofactor Synthesis C VY92_RS04730 PF01933 Uncharacterised protein family UPF0052 VY92_RS04740 PF13954 PapC N-terminal domain VY92_RS04740 PF13953 PapC C-terminal domain VY92_RS04740 PF00577 Outer membrane usher protein VY92_RS04745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VY92_RS04745 PF02753 Pili assembly chaperone PapD, C-terminal domain VY92_RS04765 PF03062 MBOAT, membrane-bound O-acyltransferase family VY92_RS04770 PF01227 GTP cyclohydrolase I VY92_RS04775 PF03453 MoeA N-terminal region (domain I and II) VY92_RS04775 PF03454 MoeA C-terminal region (domain IV) VY92_RS04775 PF00994 Probable molybdopterin binding domain VY92_RS04780 PF00899 ThiF family VY92_RS04785 PF03956 Lysine exporter LysO VY92_RS04790 PF00210 Ferritin-like domain VY92_RS04795 PF00210 Ferritin-like domain VY92_RS04805 PF13545 Crp-like helix-turn-helix domain VY92_RS04805 PF00027 Cyclic nucleotide-binding domain VY92_RS04810 PF00582 Universal stress protein family VY92_RS04820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal VY92_RS04820 PF14602 Hexapeptide repeat of succinyl-transferase VY92_RS04820 PF00132 Bacterial transferase hexapeptide (six repeats) VY92_RS04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS04825 PF03466 LysR substrate binding domain VY92_RS04830 PF00849 RNA pseudouridylate synthase VY92_RS04830 PF01479 S4 domain VY92_RS04835 PF01300 Telomere recombination VY92_RS04840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VY92_RS04845 PF04348 LppC putative lipoprotein VY92_RS04850 PF02021 Uncharacterised protein family UPF0102 VY92_RS04855 PF13580 SIS domain VY92_RS04860 PF04972 BON domain VY92_RS04865 PF13361 UvrD-like helicase C-terminal domain VY92_RS04865 PF00580 UvrD/REP helicase N-terminal domain VY92_RS04880 PF01728 FtsJ-like methyltransferase VY92_RS04880 PF18125 RlmM ferredoxin-like domain VY92_RS04885 PF03466 LysR substrate binding domain VY92_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS04890 PF01063 Amino-transferase class IV VY92_RS04895 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin VY92_RS04895 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS04895 PF05662 Coiled stalk of trimeric autotransporter adhesin VY92_RS04895 PF03895 YadA-like membrane anchor domain VY92_RS04905 PF03840 Preprotein translocase SecG subunit VY92_RS04910 PF01131 DNA topoisomerase VY92_RS04910 PF01751 Toprim domain VY92_RS04915 PF02575 YbaB/EbfC DNA-binding family VY92_RS04920 PF13662 Toprim domain VY92_RS04920 PF02132 RecR protein VY92_RS04925 PF01053 Cys/Met metabolism PLP-dependent enzyme VY92_RS04930 PF10417 C-terminal domain of 1-Cys peroxiredoxin VY92_RS04930 PF00578 AhpC/TSA family VY92_RS04935 PF05166 YcgL domain VY92_RS04940 PF01467 Cytidylyltransferase-like VY92_RS04940 PF00294 pfkB family carbohydrate kinase VY92_RS04945 PF03279 Bacterial lipid A biosynthesis acyltransferase VY92_RS04950 PF00753 Metallo-beta-lactamase superfamily VY92_RS04955 PF05951 Bacterial protein of unknown function (DUF882) VY92_RS04960 PF03734 L,D-transpeptidase catalytic domain VY92_RS04965 PF11818 C-terminal domain of tail specific protease (DUF3340) VY92_RS04965 PF00595 PDZ domain VY92_RS04965 PF03572 Peptidase family S41 VY92_RS04965 PF17804 Tail specific protease N-terminal domain VY92_RS04970 PF04352 ProQ/FINO family VY92_RS04970 PF17516 ProQ C-terminal domain VY92_RS04975 PF04403 Paraquat-inducible protein A VY92_RS04985 PF00204 DNA gyrase B VY92_RS04985 PF00986 DNA gyrase B subunit, carboxyl terminus VY92_RS04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS04985 PF01751 Toprim domain VY92_RS04995 PF07732 Multicopper oxidase VY92_RS05000 PF03989 DNA gyrase C-terminal domain, beta-propeller VY92_RS05000 PF00521 DNA gyrase/topoisomerase IV, subunit A VY92_RS05005 PF11230 Protein of unknown function (DUF3029) VY92_RS05010 PF04055 Radical SAM superfamily VY92_RS05015 PF03783 Curli production assembly/transport component CsgG VY92_RS05025 PF05643 Putative bacterial lipoprotein (DUF799) VY92_RS05030 PF01131 DNA topoisomerase VY92_RS05030 PF08272 Topoisomerase I zinc-ribbon-like VY92_RS05030 PF01751 Toprim domain VY92_RS05030 PF01396 Topoisomerase DNA binding C4 zinc finger VY92_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS05035 PF03466 LysR substrate binding domain VY92_RS05040 PF01343 Peptidase family S49 VY92_RS05045 PF00881 Nitroreductase family VY92_RS05050 PF02678 Pirin VY92_RS05050 PF05726 Pirin C-terminal cupin domain VY92_RS05060 PF03466 LysR substrate binding domain VY92_RS05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS05065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VY92_RS05065 PF00056 lactate/malate dehydrogenase, NAD binding domain VY92_RS05070 PF10369 Small subunit of acetolactate synthase VY92_RS05075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VY92_RS05075 PF00205 Thiamine pyrophosphate enzyme, central domain VY92_RS05075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VY92_RS05080 PF03553 Na+/H+ antiporter family VY92_RS05085 PF00816 H-NS histone family VY92_RS05090 PF08206 Ribonuclease B OB domain VY92_RS05090 PF00773 RNB domain VY92_RS05090 PF00575 S1 RNA binding domain VY92_RS05100 PF01784 NIF3 (NGG1p interacting factor 3) VY92_RS05105 PF00356 Bacterial regulatory proteins, lacI family VY92_RS05110 PF00311 Phosphoenolpyruvate carboxylase VY92_RS05115 PF01938 TRAM domain VY92_RS05115 PF04055 Radical SAM superfamily VY92_RS05115 PF00919 Uncharacterized protein family UPF0004 VY92_RS05120 PF01494 FAD binding domain VY92_RS05145 PF00149 Calcineurin-like phosphoesterase VY92_RS05150 PF00293 NUDIX domain VY92_RS05155 PF06146 Phosphate-starvation-inducible E VY92_RS05160 PF02557 D-alanyl-D-alanine carboxypeptidase VY92_RS05165 PF01546 Peptidase family M20/M25/M40 VY92_RS05165 PF07687 Peptidase dimerisation domain VY92_RS05170 PF03960 ArsC family VY92_RS05175 PF02086 D12 class N6 adenine-specific DNA methyltransferase VY92_RS05180 PF05315 ICEA Protein VY92_RS05185 PF01555 DNA methylase VY92_RS05190 PF14821 Threonine synthase N terminus VY92_RS05190 PF00291 Pyridoxal-phosphate dependent enzyme VY92_RS05195 PF08544 GHMP kinases C terminal VY92_RS05195 PF00288 GHMP kinases N terminal domain VY92_RS05200 PF00696 Amino acid kinase family VY92_RS05200 PF01842 ACT domain VY92_RS05200 PF03447 Homoserine dehydrogenase, NAD binding domain VY92_RS05200 PF13840 ACT domain VY92_RS05200 PF00742 Homoserine dehydrogenase VY92_RS05205 PF01168 Alanine racemase, N-terminal domain VY92_RS05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VY92_RS05215 PF00929 Exonuclease VY92_RS05220 PF13726 Na+-H+ antiporter family VY92_RS05220 PF03553 Na+/H+ antiporter family VY92_RS05225 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VY92_RS05225 PF14850 DNA-binding domain of Proline dehydrogenase VY92_RS05225 PF00171 Aldehyde dehydrogenase family VY92_RS05225 PF01619 Proline dehydrogenase VY92_RS05230 PF00474 Sodium:solute symporter family VY92_RS05235 PF02547 Queuosine biosynthesis protein VY92_RS05240 PF01702 Queuine tRNA-ribosyltransferase VY92_RS05245 PF01814 Hemerythrin HHE cation binding domain VY92_RS05250 PF02699 Preprotein translocase subunit VY92_RS05255 PF07549 SecD/SecF GG Motif VY92_RS05255 PF13721 SecD export protein N-terminal TM region VY92_RS05255 PF02355 Protein export membrane protein VY92_RS05260 PF07549 SecD/SecF GG Motif VY92_RS05260 PF02355 Protein export membrane protein VY92_RS05265 PF01464 Transglycosylase SLT domain VY92_RS05265 PF14718 Soluble lytic murein transglycosylase L domain VY92_RS05270 PF01371 Trp repressor protein VY92_RS05275 PF00912 Transglycosylase VY92_RS05280 PF00106 short chain dehydrogenase VY92_RS05285 PF12832 MFS_1 like family VY92_RS05310 PF13332 Hemagglutinin repeat VY92_RS05310 PF04829 Pre-toxin domain with VENN motif VY92_RS05310 PF05860 haemagglutination activity domain VY92_RS05310 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS05335 PF01555 DNA methylase VY92_RS05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS05345 PF03466 LysR substrate binding domain VY92_RS05350 PF08521 Two-component sensor kinase N-terminal VY92_RS05350 PF00512 His Kinase A (phospho-acceptor) domain VY92_RS05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS05355 PF00486 Transcriptional regulatory protein, C terminal VY92_RS05355 PF00072 Response regulator receiver domain VY92_RS05360 PF03070 TENA/THI-4/PQQC family VY92_RS05375 PF01757 Acyltransferase family VY92_RS05385 PF02233 NAD(P) transhydrogenase beta subunit VY92_RS05390 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VY92_RS05390 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VY92_RS05390 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VY92_RS05395 PF03749 Sugar fermentation stimulation protein RE domain VY92_RS05395 PF17746 SfsA N-terminal OB domain VY92_RS05405 PF00884 Sulfatase VY92_RS05405 PF16347 Domain of unknown function (DUF4976) VY92_RS05415 PF03102 NeuB family VY92_RS05415 PF08666 SAF domain VY92_RS05420 PF02348 Cytidylyltransferase VY92_RS05420 PF13472 GDSL-like Lipase/Acylhydrolase family VY92_RS05425 PF02350 UDP-N-acetylglucosamine 2-epimerase VY92_RS05430 PF00579 tRNA synthetases class I (W and Y) VY92_RS05430 PF01479 S4 domain VY92_RS05435 PF00294 pfkB family carbohydrate kinase VY92_RS05440 PF08244 Glycosyl hydrolases family 32 C terminal VY92_RS05440 PF00251 Glycosyl hydrolases family 32 N-terminal domain VY92_RS05455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VY92_RS05460 PF01476 LysM domain VY92_RS05460 PF01520 N-acetylmuramoyl-L-alanine amidase VY92_RS05465 PF08676 MutL C terminal dimerisation domain VY92_RS05465 PF01119 DNA mismatch repair protein, C-terminal domain VY92_RS05475 PF17209 Hfq protein VY92_RS05480 PF13167 GTP-binding GTPase N-terminal VY92_RS05480 PF01926 50S ribosome-binding GTPase VY92_RS05480 PF16360 GTP-binding GTPase Middle Region VY92_RS05485 PF00860 Permease family VY92_RS05490 PF04269 Protein of unknown function, DUF440 VY92_RS05505 PF01926 50S ribosome-binding GTPase VY92_RS05505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VY92_RS05515 PF13099 Domain of unknown function (DUF3944) VY92_RS05515 PF03981 Ubiquinol-cytochrome C chaperone VY92_RS05555 PF13280 WYL domain VY92_RS05555 PF08279 HTH domain VY92_RS05565 PF07445 Primosomal replication protein priC VY92_RS05570 PF02678 Pirin VY92_RS05570 PF17954 Quercetinase C-terminal cupin domain VY92_RS05575 PF13406 Transglycosylase SLT domain VY92_RS05580 PF00535 Glycosyl transferase family 2 VY92_RS05585 PF00535 Glycosyl transferase family 2 VY92_RS05595 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) VY92_RS05605 PF04230 Polysaccharide pyruvyl transferase VY92_RS05610 PF02698 DUF218 domain VY92_RS05615 PF00109 Beta-ketoacyl synthase, N-terminal domain VY92_RS05615 PF02801 Beta-ketoacyl synthase, C-terminal domain VY92_RS05620 PF01266 FAD dependent oxidoreductase VY92_RS05620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VY92_RS05625 PF09334 tRNA synthetases class I (M) VY92_RS05625 PF01588 Putative tRNA binding domain VY92_RS05630 PF10609 NUBPL iron-transfer P-loop NTPase VY92_RS05635 PF03239 Iron permease FTR1 family VY92_RS05640 PF10634 Fe2+ transport protein VY92_RS05650 PF12704 MacB-like periplasmic core domain VY92_RS05650 PF02687 FtsX-like permease family VY92_RS05650 PF00005 ABC transporter VY92_RS05660 PF00005 ABC transporter VY92_RS05665 PF01263 Aldose 1-epimerase VY92_RS05675 PF00152 tRNA synthetases class II (D, K and N) VY92_RS05675 PF01336 OB-fold nucleic acid binding domain VY92_RS05680 PF02661 Fic/DOC family VY92_RS05680 PF12728 Helix-turn-helix domain VY92_RS05690 PF13098 Thioredoxin-like domain VY92_RS05690 PF10411 Disulfide bond isomerase protein N-terminus VY92_RS05695 PF02272 DHHA1 domain VY92_RS05695 PF17768 RecJ OB domain VY92_RS05695 PF01368 DHH family VY92_RS05700 PF01048 Phosphorylase superfamily VY92_RS05705 PF01389 OmpA-like transmembrane domain VY92_RS05705 PF00691 OmpA family VY92_RS05710 PF03831 PhnA domain VY92_RS05710 PF08274 PhnA Zinc-Ribbon VY92_RS05715 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VY92_RS05720 PF00005 ABC transporter VY92_RS05730 PF01032 FecCD transport family VY92_RS05740 PF10670 Domain of unknown function (DUF4198) VY92_RS05745 PF00593 TonB dependent receptor VY92_RS05745 PF07715 TonB-dependent Receptor Plug Domain VY92_RS05750 PF07715 TonB-dependent Receptor Plug Domain VY92_RS05750 PF00593 TonB dependent receptor VY92_RS05755 PF03313 Serine dehydratase alpha chain VY92_RS05765 PF08348 YheO-like PAS domain VY92_RS05765 PF13309 HTH domain VY92_RS05775 PF02887 Pyruvate kinase, alpha/beta domain VY92_RS05775 PF00224 Pyruvate kinase, barrel domain VY92_RS05780 PF00881 Nitroreductase family VY92_RS05785 PF08543 Phosphomethylpyrimidine kinase VY92_RS05790 PF11734 TilS substrate C-terminal domain VY92_RS05790 PF09179 TilS substrate binding domain VY92_RS05790 PF01171 PP-loop family VY92_RS05795 PF02629 CoA binding domain VY92_RS05795 PF00549 CoA-ligase VY92_RS05800 PF08442 ATP-grasp domain VY92_RS05800 PF00549 CoA-ligase VY92_RS05805 PF02817 e3 binding domain VY92_RS05805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VY92_RS05805 PF00364 Biotin-requiring enzyme VY92_RS05810 PF02779 Transketolase, pyrimidine binding domain VY92_RS05810 PF16870 2-oxoglutarate dehydrogenase C-terminal VY92_RS05810 PF00676 Dehydrogenase E1 component VY92_RS05810 PF16078 2-oxoglutarate dehydrogenase N-terminus VY92_RS05815 PF00285 Citrate synthase, C-terminal domain VY92_RS05825 PF02525 Flavodoxin-like fold VY92_RS05835 PF01145 SPFH domain / Band 7 family VY92_RS05835 PF16200 C-terminal region of band_7 VY92_RS05865 PF01047 MarR family VY92_RS05865 PF00480 ROK family VY92_RS05870 PF01025 GrpE VY92_RS05875 PF01513 ATP-NAD kinase VY92_RS05880 PF02463 RecF/RecN/SMC N terminal domain VY92_RS05885 PF01250 Ribosomal protein S6 VY92_RS05890 PF00436 Single-strand binding protein family VY92_RS05895 PF01084 Ribosomal protein S18 VY92_RS05900 PF01281 Ribosomal protein L9, N-terminal domain VY92_RS05900 PF03948 Ribosomal protein L9, C-terminal domain VY92_RS05905 PF00202 Aminotransferase class-III VY92_RS05910 PF01523 Putative modulator of DNA gyrase VY92_RS05915 PF00575 S1 RNA binding domain VY92_RS05915 PF10150 Ribonuclease E/G family VY92_RS05920 PF08003 Protein of unknown function (DUF1698) VY92_RS05965 PF00953 Glycosyl transferase family 4 VY92_RS05970 PF00202 Aminotransferase class-III VY92_RS05975 PF08335 GlnD PII-uridylyltransferase VY92_RS05975 PF01966 HD domain VY92_RS05980 PF00557 Metallopeptidase family M24 VY92_RS05985 PF01521 Iron-sulphur cluster biosynthesis VY92_RS05990 PF06062 Uncharacterised protein family (UPF0231) VY92_RS05995 PF00905 Penicillin binding protein transpeptidase domain VY92_RS05995 PF00912 Transglycosylase VY92_RS05995 PF14814 Bifunctional transglycosylase second domain VY92_RS06005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VY92_RS06010 PF04304 Protein of unknown function (DUF454) VY92_RS06015 PF01432 Peptidase family M3 VY92_RS06020 PF00152 tRNA synthetases class II (D, K and N) VY92_RS06025 PF02910 Fumarate reductase flavoprotein C-term VY92_RS06025 PF00890 FAD binding domain VY92_RS06030 PF13183 4Fe-4S dicluster domain VY92_RS06030 PF13085 2Fe-2S iron-sulfur cluster binding domain VY92_RS06035 PF02300 Fumarate reductase subunit C VY92_RS06040 PF02313 Fumarate reductase subunit D VY92_RS06045 PF10672 S-adenosylmethionine-dependent methyltransferase VY92_RS06045 PF01170 Putative RNA methylase family UPF0020 VY92_RS06045 PF02926 THUMP domain VY92_RS06050 PF01297 Zinc-uptake complex component A periplasmic VY92_RS06055 PF00899 ThiF family VY92_RS06060 PF06725 3D domain VY92_RS06060 PF03562 MltA specific insert domain VY92_RS06075 PF00313 'Cold-shock' DNA-binding domain VY92_RS06080 PF08245 Mur ligase middle domain VY92_RS06080 PF01225 Mur ligase family, catalytic domain VY92_RS06080 PF02875 Mur ligase family, glutamate ligase domain VY92_RS06085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VY92_RS06090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VY92_RS06095 PF01722 BolA-like protein VY92_RS06100 PF13466 STAS domain VY92_RS06105 PF05494 MlaC protein VY92_RS06110 PF02470 MlaD protein VY92_RS06115 PF02405 Permease MlaE VY92_RS06120 PF00005 ABC transporter VY92_RS06130 PF06835 Lipopolysaccharide-assembly, LptC-related VY92_RS06135 PF03968 OstA-like protein VY92_RS06140 PF12399 Branched-chain amino acid ATP-binding cassette transporter VY92_RS06140 PF00005 ABC transporter VY92_RS06145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VY92_RS06150 PF03668 P-loop ATPase protein family VY92_RS06155 PF03786 D-mannonate dehydratase (UxuA) VY92_RS06160 PF07729 FCD domain VY92_RS06160 PF00392 Bacterial regulatory proteins, gntR family VY92_RS06165 PF17137 Domain of unknown function (DUF5110) VY92_RS06165 PF13802 Galactose mutarotase-like VY92_RS06165 PF16338 Domain of unknown function (DUF4968) VY92_RS06165 PF01055 Glycosyl hydrolases family 31 VY92_RS06170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VY92_RS06175 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VY92_RS06185 PF03480 Bacterial extracellular solute-binding protein, family 7 VY92_RS06190 PF00106 short chain dehydrogenase VY92_RS06195 PF02614 Glucuronate isomerase VY92_RS06205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VY92_RS06210 PF00155 Aminotransferase class I and II VY92_RS06215 PF00266 Aminotransferase class-V VY92_RS06220 PF04363 Protein of unknown function (DUF496) VY92_RS06225 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS06225 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin VY92_RS06225 PF03895 YadA-like membrane anchor domain VY92_RS06225 PF05662 Coiled stalk of trimeric autotransporter adhesin VY92_RS06230 PF00367 phosphotransferase system, EIIB VY92_RS06230 PF02378 Phosphotransferase system, EIIC VY92_RS06235 PF05191 Adenylate kinase, active site lid VY92_RS06240 PF00561 alpha/beta hydrolase fold VY92_RS06245 PF16582 Middle domain of thiamine pyrophosphate VY92_RS06245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VY92_RS06245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VY92_RS06250 PF00425 chorismate binding enzyme VY92_RS06255 PF00155 Aminotransferase class I and II VY92_RS06260 PF07840 FadR C-terminal domain VY92_RS06260 PF00392 Bacterial regulatory proteins, gntR family VY92_RS06265 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VY92_RS06270 PF02600 Disulfide bond formation protein DsbB VY92_RS06275 PF03741 Integral membrane protein TerC family VY92_RS06280 PF02976 DNA mismatch repair enzyme MutH VY92_RS06285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VY92_RS06285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VY92_RS06290 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VY92_RS06300 PF03458 UPF0126 domain VY92_RS06305 PF00171 Aldehyde dehydrogenase family VY92_RS06310 PF01842 ACT domain VY92_RS06310 PF00696 Amino acid kinase family VY92_RS06315 PF00581 Rhodanese-like domain VY92_RS06320 PF04143 Sulphur transport VY92_RS06325 PF00709 Adenylosuccinate synthetase VY92_RS06340 PF01791 DeoC/LacD family aldolase VY92_RS06345 PF01979 Amidohydrolase family VY92_RS06350 PF08220 DeoR-like helix-turn-helix domain VY92_RS06350 PF00455 DeoR C terminal sensor domain VY92_RS06360 PF00884 Sulfatase VY92_RS06365 PF04055 Radical SAM superfamily VY92_RS06365 PF13186 Iron-sulfur cluster-binding domain VY92_RS06375 PF07470 Glycosyl Hydrolase Family 88 VY92_RS06380 PF03830 PTS system sorbose subfamily IIB component VY92_RS06380 PF03610 PTS system fructose IIA component VY92_RS06385 PF03613 PTS system mannose/fructose/sorbose family IID component VY92_RS06390 PF03609 PTS system sorbose-specific iic component VY92_RS06395 PF03830 PTS system sorbose subfamily IIB component VY92_RS06400 PF01380 SIS domain VY92_RS06405 PF08013 Tagatose 6 phosphate kinase VY92_RS06410 PF00884 Sulfatase VY92_RS06425 PF09339 IclR helix-turn-helix domain VY92_RS06425 PF01614 Bacterial transcriptional regulator VY92_RS06430 PF00294 pfkB family carbohydrate kinase VY92_RS06435 PF01081 KDPG and KHG aldolase VY92_RS06440 PF03009 Glycerophosphoryl diester phosphodiesterase family VY92_RS06445 PF00005 ABC transporter VY92_RS06445 PF08402 TOBE domain VY92_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS06465 PF00328 Histidine phosphatase superfamily (branch 2) VY92_RS06475 PF01132 Elongation factor P (EF-P) OB domain VY92_RS06475 PF08207 Elongation factor P (EF-P) KOW-like domain VY92_RS06475 PF09285 Elongation factor P, C-terminal VY92_RS06480 PF04055 Radical SAM superfamily VY92_RS06485 PF08525 Opacity-associated protein A N-terminal motif VY92_RS06485 PF04225 Opacity-associated protein A LysM-like domain VY92_RS06490 PF04381 Putative exonuclease, RdgC VY92_RS06495 PF14748 Pyrroline-5-carboxylate reductase dimerisation VY92_RS06495 PF03807 NADP oxidoreductase coenzyme F420-dependent VY92_RS06500 PF12832 MFS_1 like family VY92_RS06505 PF00589 Phage integrase family VY92_RS06505 PF02899 Phage integrase, N-terminal SAM-like domain VY92_RS06510 PF00800 Prephenate dehydratase VY92_RS06510 PF01817 Chorismate mutase type II VY92_RS06515 PF14765 Polyketide synthase dehydratase VY92_RS06515 PF08240 Alcohol dehydrogenase GroES-like domain VY92_RS06515 PF08659 KR domain VY92_RS06515 PF02801 Beta-ketoacyl synthase, C-terminal domain VY92_RS06515 PF00109 Beta-ketoacyl synthase, N-terminal domain VY92_RS06515 PF16197 Ketoacyl-synthetase C-terminal extension VY92_RS06515 PF00698 Acyl transferase domain VY92_RS06515 PF00107 Zinc-binding dehydrogenase VY92_RS06515 PF00550 Phosphopantetheine attachment site VY92_RS06530 PF00106 short chain dehydrogenase VY92_RS06535 PF01965 DJ-1/PfpI family VY92_RS06545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VY92_RS06550 PF12327 FtsZ family, C-terminal domain VY92_RS06550 PF00091 Tubulin/FtsZ family, GTPase domain VY92_RS06555 PF02491 SHS2 domain inserted in FTSA VY92_RS06560 PF08478 POTRA domain, FtsQ-type VY92_RS06560 PF03799 Cell division protein FtsQ VY92_RS06565 PF07478 D-ala D-ala ligase C-terminus VY92_RS06565 PF01820 D-ala D-ala ligase N-terminus VY92_RS06570 PF08245 Mur ligase middle domain VY92_RS06570 PF02875 Mur ligase family, glutamate ligase domain VY92_RS06570 PF01225 Mur ligase family, catalytic domain VY92_RS06575 PF04101 Glycosyltransferase family 28 C-terminal domain VY92_RS06575 PF03033 Glycosyltransferase family 28 N-terminal domain VY92_RS06580 PF01098 Cell cycle protein VY92_RS06585 PF02875 Mur ligase family, glutamate ligase domain VY92_RS06585 PF08245 Mur ligase middle domain VY92_RS06590 PF00953 Glycosyl transferase family 4 VY92_RS06590 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VY92_RS06595 PF01225 Mur ligase family, catalytic domain VY92_RS06595 PF02875 Mur ligase family, glutamate ligase domain VY92_RS06595 PF08245 Mur ligase middle domain VY92_RS06600 PF08245 Mur ligase middle domain VY92_RS06600 PF02875 Mur ligase family, glutamate ligase domain VY92_RS06600 PF01225 Mur ligase family, catalytic domain VY92_RS06605 PF03717 Penicillin-binding Protein dimerisation domain VY92_RS06605 PF00905 Penicillin binding protein transpeptidase domain VY92_RS06610 PF04999 Cell division protein FtsL VY92_RS06615 PF01795 MraW methylase family VY92_RS06620 PF02381 MraZ protein, putative antitoxin-like VY92_RS06630 PF13718 GNAT acetyltransferase 2 VY92_RS06630 PF05127 Helicase VY92_RS06630 PF17176 tRNA-binding domain VY92_RS06635 PF02130 Uncharacterized protein family UPF0054 VY92_RS06640 PF02562 PhoH-like protein VY92_RS06645 PF00149 Calcineurin-like phosphoesterase VY92_RS06650 PF01553 Acyltransferase VY92_RS06655 PF07732 Multicopper oxidase VY92_RS06660 PF13230 Glutamine amidotransferases class-II VY92_RS06665 PF03222 Tryptophan/tyrosine permease family VY92_RS06670 PF03313 Serine dehydratase alpha chain VY92_RS06670 PF03315 Serine dehydratase beta chain VY92_RS06675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VY92_RS06675 PF01578 Cytochrome C assembly protein VY92_RS06680 PF08534 Redoxin VY92_RS06685 PF03918 Cytochrome C biogenesis protein VY92_RS06690 PF03918 Cytochrome C biogenesis protein VY92_RS06700 PF01336 OB-fold nucleic acid binding domain VY92_RS06700 PF02811 PHP domain VY92_RS06700 PF14579 Helix-hairpin-helix motif VY92_RS06700 PF07733 Bacterial DNA polymerase III alpha NTPase domain VY92_RS06700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VY92_RS06705 PF03916 Polysulphide reductase, NrfD VY92_RS06710 PF13247 4Fe-4S dicluster domain VY92_RS06720 PF02335 Cytochrome c552 VY92_RS06725 PF04055 Radical SAM superfamily VY92_RS06725 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VY92_RS06730 PF03099 Biotin/lipoate A/B protein ligase family VY92_RS06735 PF04359 Protein of unknown function (DUF493) VY92_RS06740 PF00768 D-alanyl-D-alanine carboxypeptidase VY92_RS06740 PF07943 Penicillin-binding protein 5, C-terminal domain VY92_RS06745 PF03330 Lytic transglycolase VY92_RS06745 PF05036 Sporulation related domain VY92_RS06750 PF01098 Cell cycle protein VY92_RS06755 PF00905 Penicillin binding protein transpeptidase domain VY92_RS06755 PF03717 Penicillin-binding Protein dimerisation domain VY92_RS06760 PF02590 Predicted SPOUT methyltransferase VY92_RS06770 PF00270 DEAD/DEAH box helicase VY92_RS06770 PF00271 Helicase conserved C-terminal domain VY92_RS06775 PF07498 Rho termination factor, N-terminal domain VY92_RS06775 PF07497 Rho termination factor, RNA-binding domain VY92_RS06775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VY92_RS06780 PF07690 Major Facilitator Superfamily VY92_RS06790 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) VY92_RS06795 PF00485 Phosphoribulokinase / Uridine kinase family VY92_RS06800 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS06805 PF00005 ABC transporter VY92_RS06805 PF08402 TOBE domain VY92_RS06830 PF01177 Asp/Glu/Hydantoin racemase VY92_RS06835 PF17191 RecG wedge domain VY92_RS06835 PF00271 Helicase conserved C-terminal domain VY92_RS06835 PF00270 DEAD/DEAH box helicase VY92_RS06840 PF02824 TGS domain VY92_RS06840 PF04607 Region found in RelA / SpoT proteins VY92_RS06840 PF13291 ACT domain VY92_RS06845 PF01192 RNA polymerase Rpb6 VY92_RS06850 PF00625 Guanylate kinase VY92_RS06855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VY92_RS06855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VY92_RS06860 PF12762 ISXO2-like transposase domain VY92_RS06865 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VY92_RS06865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VY92_RS06870 PF02666 Phosphatidylserine decarboxylase VY92_RS06885 PF00202 Aminotransferase class-III VY92_RS06890 PF00155 Aminotransferase class I and II VY92_RS06895 PF04301 Protein of unknown function (DUF452) VY92_RS06900 PF08241 Methyltransferase domain VY92_RS06910 PF02620 Large ribosomal RNA subunit accumulation protein YceD VY92_RS06915 PF01783 Ribosomal L32p protein family VY92_RS06920 PF02504 Fatty acid synthesis protein VY92_RS06925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VY92_RS06925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VY92_RS06930 PF00698 Acyl transferase domain VY92_RS06940 PF00550 Phosphopantetheine attachment site VY92_RS06950 PF03605 Anaerobic c4-dicarboxylate membrane transporter VY92_RS06955 PF03466 LysR substrate binding domain VY92_RS06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS06960 PF00248 Aldo/keto reductase family VY92_RS06995 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VY92_RS07025 PF00436 Single-strand binding protein family VY92_RS07030 PF17760 UvrA interaction domain VY92_RS07030 PF17755 UvrA DNA-binding domain VY92_RS07040 PF04085 rod shape-determining protein MreC VY92_RS07045 PF04093 rod shape-determining protein MreD VY92_RS07050 PF01243 Pyridoxamine 5'-phosphate oxidase VY92_RS07055 PF06228 Haem utilisation ChuX/HutX VY92_RS07060 PF07715 TonB-dependent Receptor Plug Domain VY92_RS07060 PF00593 TonB dependent receptor VY92_RS07065 PF08479 POTRA domain, ShlB-type VY92_RS07065 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VY92_RS07070 PF05860 haemagglutination activity domain VY92_RS07075 PF01406 tRNA synthetases class I (C) catalytic domain VY92_RS07075 PF09190 DALR domain VY92_RS07080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VY92_RS07085 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VY92_RS07085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VY92_RS07090 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VY92_RS07095 PF00480 ROK family VY92_RS07100 PF04074 YhcH/YjgK/YiaL VY92_RS07105 PF01380 SIS domain VY92_RS07105 PF01418 Helix-turn-helix domain, rpiR family VY92_RS07110 PF00701 Dihydrodipicolinate synthetase family VY92_RS07115 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VY92_RS07115 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VY92_RS07115 PF06827 Zinc finger found in FPG and IleRS VY92_RS07120 PF00471 Ribosomal protein L33 VY92_RS07125 PF00830 Ribosomal L28 family VY92_RS07130 PF04002 RadC-like JAB domain VY92_RS07135 PF02441 Flavoprotein VY92_RS07135 PF04127 DNA / pantothenate metabolism flavoprotein VY92_RS07140 PF00692 dUTPase VY92_RS07145 PF00440 Bacterial regulatory proteins, tetR family VY92_RS07150 PF06794 Uncharacterised protein family (UPF0270) VY92_RS07155 PF13545 Crp-like helix-turn-helix domain VY92_RS07155 PF00027 Cyclic nucleotide-binding domain VY92_RS07160 PF02653 Branched-chain amino acid transport system / permease component VY92_RS07165 PF00005 ABC transporter VY92_RS07170 PF13407 Periplasmic binding protein domain VY92_RS07175 PF13407 Periplasmic binding protein domain VY92_RS07180 PF01494 FAD binding domain VY92_RS07185 PF01494 FAD binding domain VY92_RS07190 PF05195 Aminopeptidase P, N-terminal domain VY92_RS07190 PF00557 Metallopeptidase family M24 VY92_RS07195 PF03695 Uncharacterised protein family (UPF0149) VY92_RS07200 PF05164 Cell division protein ZapA VY92_RS07210 PF01812 5-formyltetrahydrofolate cyclo-ligase family VY92_RS07215 PF00589 Phage integrase family VY92_RS07215 PF02899 Phage integrase, N-terminal SAM-like domain VY92_RS07220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VY92_RS07220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VY92_RS07225 PF00230 Major intrinsic protein VY92_RS07230 PF18389 TrmO C-terminal domain VY92_RS07230 PF01980 tRNA-methyltransferase O VY92_RS07240 PF03737 Aldolase/RraA VY92_RS07245 PF00939 Sodium:sulfate symporter transmembrane region VY92_RS07250 PF01209 ubiE/COQ5 methyltransferase family VY92_RS07255 PF02036 SCP-2 sterol transfer family VY92_RS07260 PF03109 ABC1 family VY92_RS07265 PF02416 mttA/Hcf106 family VY92_RS07275 PF00902 Sec-independent protein translocase protein (TatC) VY92_RS07280 PF00490 Delta-aminolevulinic acid dehydratase VY92_RS07285 PF01026 TatD related DNase VY92_RS07300 PF12826 Helix-hairpin-helix motif VY92_RS07300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VY92_RS07300 PF03120 NAD-dependent DNA ligase OB-fold domain VY92_RS07300 PF01653 NAD-dependent DNA ligase adenylation domain VY92_RS07300 PF00533 BRCA1 C Terminus (BRCT) domain VY92_RS07305 PF04354 ZipA, C-terminal FtsZ-binding domain VY92_RS07315 PF00291 Pyridoxal-phosphate dependent enzyme VY92_RS07320 PF00118 TCP-1/cpn60 chaperonin family VY92_RS07325 PF00166 Chaperonin 10 Kd subunit VY92_RS07375 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VY92_RS07405 PF13356 Arm DNA-binding domain VY92_RS07405 PF00589 Phage integrase family VY92_RS07415 PF01464 Transglycosylase SLT domain VY92_RS07415 PF00497 Bacterial extracellular solute-binding proteins, family 3 VY92_RS07420 PF13580 SIS domain VY92_RS07430 PF00270 DEAD/DEAH box helicase VY92_RS07430 PF03461 TRCF domain VY92_RS07430 PF00271 Helicase conserved C-terminal domain VY92_RS07430 PF17757 UvrB interaction domain VY92_RS07430 PF02559 CarD-like/TRCF domain VY92_RS07435 PF00293 NUDIX domain VY92_RS07445 PF10818 Protein of unknown function (DUF2547) VY92_RS07450 PF05258 Dna[CI] antecedent, DciA VY92_RS07455 PF02086 D12 class N6 adenine-specific DNA methyltransferase VY92_RS07460 PF01761 3-dehydroquinate synthase VY92_RS07465 PF01202 Shikimate kinase VY92_RS07470 PF03958 Bacterial type II/III secretion system short domain VY92_RS07470 PF00263 Bacterial type II and III secretion system protein VY92_RS07490 PF11104 Type IV pilus assembly protein PilM; VY92_RS07495 PF00905 Penicillin binding protein transpeptidase domain VY92_RS07495 PF17092 Penicillin-binding protein OB-like domain VY92_RS07495 PF00912 Transglycosylase VY92_RS07500 PF12762 ISXO2-like transposase domain VY92_RS07505 PF00042 Globin VY92_RS07505 PF00175 Oxidoreductase NAD-binding domain VY92_RS07505 PF00970 Oxidoreductase FAD-binding domain VY92_RS07510 PF02082 Transcriptional regulator VY92_RS07515 PF05746 DALR anticodon binding domain VY92_RS07515 PF02092 Glycyl-tRNA synthetase beta subunit VY92_RS07525 PF04480 Protein of unknown function (DUF559) VY92_RS07530 PF17761 DUF1016 N-terminal domain VY92_RS07530 PF06250 YhcG PDDEXK nuclease domain VY92_RS07545 PF02091 Glycyl-tRNA synthetase alpha subunit VY92_RS07565 PF00749 tRNA synthetases class I (E and Q), catalytic domain VY92_RS07575 PF00589 Phage integrase family VY92_RS07585 PF02498 BRO family, N-terminal domain VY92_RS07585 PF10548 P22AR C-terminal domain VY92_RS07610 PF00436 Single-strand binding protein family VY92_RS07715 PF07411 Domain of unknown function (DUF1508) VY92_RS07740 PF07102 Protein of unknown function (DUF1364) VY92_RS07780 PF00717 Peptidase S24-like VY92_RS07780 PF01726 LexA DNA binding domain VY92_RS07795 PF07411 Domain of unknown function (DUF1508) VY92_RS07840 PF00436 Single-strand binding protein family VY92_RS07855 PF04381 Putative exonuclease, RdgC VY92_RS07905 PF00589 Phage integrase family VY92_RS07925 PF01053 Cys/Met metabolism PLP-dependent enzyme VY92_RS07930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VY92_RS07930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VY92_RS07935 PF00085 Thioredoxin VY92_RS07940 PF02677 Epoxyqueuosine reductase QueH VY92_RS07945 PF00348 Polyprenyl synthetase VY92_RS07950 PF00829 Ribosomal prokaryotic L21 protein VY92_RS07955 PF01016 Ribosomal L27 protein VY92_RS07960 PF00892 EamA-like transporter family VY92_RS07965 PF01926 50S ribosome-binding GTPase VY92_RS07965 PF01018 GTP1/OBG VY92_RS08030 PF00545 ribonuclease VY92_RS08055 PF00545 ribonuclease VY92_RS08065 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS08065 PF04829 Pre-toxin domain with VENN motif VY92_RS08065 PF05860 haemagglutination activity domain VY92_RS08065 PF04829 Pre-toxin domain with VENN motif VY92_RS08065 PF13018 Extended Signal Peptide of Type V secretion system VY92_RS08065 PF13332 Hemagglutinin repeat VY92_RS08065 PF05860 haemagglutination activity domain VY92_RS08065 PF13332 Hemagglutinin repeat VY92_RS08070 PF08479 POTRA domain, ShlB-type VY92_RS08070 PF17287 POTRA domain VY92_RS08070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VY92_RS08075 PF03601 Conserved hypothetical protein 698 VY92_RS08080 PF01047 MarR family VY92_RS08085 PF03895 YadA-like membrane anchor domain VY92_RS08085 PF05658 Head domain of trimeric autotransporter adhesin VY92_RS08085 PF05662 Coiled stalk of trimeric autotransporter adhesin VY92_RS08095 PF01047 MarR family VY92_RS08100 PF00529 HlyD membrane-fusion protein of T1SS VY92_RS08100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VY92_RS08105 PF07690 Major Facilitator Superfamily VY92_RS08110 PF08032 RNA 2'-O ribose methyltransferase substrate binding VY92_RS08110 PF00588 SpoU rRNA Methylase family VY92_RS08115 PF00575 S1 RNA binding domain VY92_RS08115 PF00773 RNB domain VY92_RS08115 PF08206 Ribonuclease B OB domain VY92_RS08115 PF08461 Ribonuclease R winged-helix domain VY92_RS08115 PF17876 Cold shock domain VY92_RS08120 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VY92_RS08120 PF01926 50S ribosome-binding GTPase VY92_RS08125 PF07650 KH domain VY92_RS08125 PF01926 50S ribosome-binding GTPase VY92_RS08130 PF14622 Ribonuclease-III-like VY92_RS08130 PF00035 Double-stranded RNA binding motif VY92_RS08135 PF10502 Signal peptidase, peptidase S26 VY92_RS08140 PF00009 Elongation factor Tu GTP binding domain VY92_RS08140 PF00679 Elongation factor G C-terminus VY92_RS08140 PF03144 Elongation factor Tu domain 2 VY92_RS08140 PF06421 GTP-binding protein LepA C-terminus VY92_RS08145 PF01228 Glycine radical VY92_RS08150 PF03167 Uracil DNA glycosylase superfamily VY92_RS08155 PF03883 Peroxide stress protein YaaA VY92_RS08165 PF16916 Dimerisation domain of Zinc Transporter VY92_RS08165 PF01545 Cation efflux family VY92_RS08170 PF00365 Phosphofructokinase VY92_RS08175 PF00334 Nucleoside diphosphate kinase VY92_RS08180 PF12404 Peptidase VY92_RS08180 PF00883 Cytosol aminopeptidase family, catalytic domain VY92_RS08190 PF01176 Translation initiation factor 1A / IF-1 VY92_RS08195 PF00512 His Kinase A (phospho-acceptor) domain VY92_RS08195 PF01627 Hpt domain VY92_RS08195 PF00989 PAS fold VY92_RS08195 PF18415 Histidine kinase receptor ArcB trans-membrane domain VY92_RS08195 PF00072 Response regulator receiver domain VY92_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS08200 PF01758 Sodium Bile acid symporter family VY92_RS08205 PF07690 Major Facilitator Superfamily VY92_RS08210 PF01370 NAD dependent epimerase/dehydratase family VY92_RS08220 PF00860 Permease family VY92_RS08230 PF01725 Ham1 family VY92_RS08235 PF04055 Radical SAM superfamily VY92_RS08235 PF06969 HemN C-terminal domain VY92_RS08240 PF02664 S-Ribosylhomocysteinase (LuxS) VY92_RS08250 PF14602 Hexapeptide repeat of succinyl-transferase VY92_RS08250 PF12464 Maltose acetyltransferase VY92_RS08255 PF13419 Haloacid dehalogenase-like hydrolase VY92_RS08265 PF02542 YgbB family VY92_RS08270 PF01142 tRNA pseudouridine synthase D (TruD) VY92_RS08275 PF01975 Survival protein SurE VY92_RS08280 PF09335 SNARE associated Golgi protein VY92_RS08290 PF01476 LysM domain VY92_RS08290 PF01551 Peptidase family M23 VY92_RS08300 PF01435 Peptidase family M48 VY92_RS08300 PF07720 Tetratricopeptide repeat VY92_RS08305 PF00719 Inorganic pyrophosphatase VY92_RS08310 PF03222 Tryptophan/tyrosine permease family VY92_RS08315 PF08241 Methyltransferase domain VY92_RS08320 PF08029 HisG, C-terminal domain VY92_RS08320 PF01634 ATP phosphoribosyltransferase VY92_RS08325 PF00815 Histidinol dehydrogenase VY92_RS08335 PF00155 Aminotransferase class I and II VY92_RS08340 PF00475 Imidazoleglycerol-phosphate dehydratase VY92_RS08345 PF17761 DUF1016 N-terminal domain VY92_RS08345 PF06250 YhcG PDDEXK nuclease domain VY92_RS08350 PF00117 Glutamine amidotransferase class-I VY92_RS08355 PF00578 AhpC/TSA family VY92_RS08360 PF00977 Histidine biosynthesis protein VY92_RS08365 PF00977 Histidine biosynthesis protein VY92_RS08375 PF01502 Phosphoribosyl-AMP cyclohydrolase VY92_RS08375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VY92_RS08380 PF04345 Chorismate lyase VY92_RS08390 PF00860 Permease family VY92_RS08395 PF00308 Bacterial dnaA protein VY92_RS08400 PF00694 Aconitase C-terminal domain VY92_RS08405 PF00330 Aconitase family (aconitate hydratase) VY92_RS08410 PF00180 Isocitrate/isopropylmalate dehydrogenase VY92_RS08415 PF00682 HMGL-like VY92_RS08415 PF08502 LeuA allosteric (dimerisation) domain VY92_RS08420 PF00005 ABC transporter VY92_RS08425 PF03379 CcmB protein VY92_RS08430 PF01578 Cytochrome C assembly protein VY92_RS08435 PF04995 Heme exporter protein D (CcmD) VY92_RS08440 PF03100 CcmE VY92_RS08445 PF01578 Cytochrome C assembly protein VY92_RS08445 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VY92_RS08450 PF08534 Redoxin VY92_RS08455 PF03918 Cytochrome C biogenesis protein VY92_RS08460 PF03918 Cytochrome C biogenesis protein VY92_RS08465 PF02653 Branched-chain amino acid transport system / permease component VY92_RS08470 PF00005 ABC transporter VY92_RS08475 PF13407 Periplasmic binding protein domain VY92_RS08480 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VY92_RS08480 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VY92_RS08485 PF00288 GHMP kinases N terminal domain VY92_RS08485 PF08544 GHMP kinases C terminal VY92_RS08485 PF10509 Galactokinase galactose-binding signature VY92_RS08490 PF01263 Aldose 1-epimerase VY92_RS08500 PF04055 Radical SAM superfamily VY92_RS08505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) VY92_RS08510 PF02901 Pyruvate formate lyase-like VY92_RS08510 PF01228 Glycine radical VY92_RS08515 PF01226 Formate/nitrite transporter VY92_RS08520 PF01230 HIT domain VY92_RS08530 PF00933 Glycosyl hydrolase family 3 N terminal domain VY92_RS08535 PF05958 tRNA (Uracil-5-)-methyltransferase VY92_RS08540 PF01794 Ferric reductase like transmembrane component VY92_RS08545 PF00174 Oxidoreductase molybdopterin binding domain VY92_RS08550 PF05036 Sporulation related domain VY92_RS08555 PF00270 DEAD/DEAH box helicase VY92_RS08555 PF00271 Helicase conserved C-terminal domain VY92_RS08555 PF18074 Primosomal protein N C-terminal domain VY92_RS08555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VY92_RS08555 PF17764 3′ DNA-binding domain (3′BD) VY92_RS08560 PF01197 Ribosomal protein L31 VY92_RS08565 PF00571 CBS domain VY92_RS08565 PF03471 Transporter associated domain VY92_RS08565 PF01595 Cyclin M transmembrane N-terminal domain VY92_RS08570 PF07509 Protein of unknown function (DUF1523) VY92_RS08575 PF01026 TatD related DNase VY92_RS08580 PF09115 DNA polymerase III, delta subunit, C terminal VY92_RS08585 PF02223 Thymidylate kinase VY92_RS08590 PF02618 YceG-like family VY92_RS08595 PF08463 EcoEI R protein C-terminal VY92_RS08595 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VY92_RS08595 PF04851 Type III restriction enzyme, res subunit VY92_RS08595 PF00271 Helicase conserved C-terminal domain VY92_RS08600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VY92_RS08600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VY92_RS08605 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VY92_RS08615 PF01145 SPFH domain / Band 7 family VY92_RS08620 PF01145 SPFH domain / Band 7 family VY92_RS08625 PF01648 4'-phosphopantetheinyl transferase superfamily VY92_RS08635 PF00183 Hsp90 protein VY92_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS08640 PF02462 Opacity family porin protein VY92_RS08645 PF10263 SprT-like family VY92_RS08645 PF17283 SprT-like zinc ribbon domain VY92_RS08650 PF07670 Nucleoside recognition VY92_RS08650 PF07662 Na+ dependent nucleoside transporter C-terminus VY92_RS08650 PF01773 Na+ dependent nucleoside transporter N-terminus VY92_RS08655 PF01676 Metalloenzyme superfamily VY92_RS08660 PF01048 Phosphorylase superfamily VY92_RS08670 PF01207 Dihydrouridine synthase (Dus) VY92_RS08690 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VY92_RS08690 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VY92_RS08695 PF00186 Dihydrofolate reductase VY92_RS08715 PF00580 UvrD/REP helicase N-terminal domain VY92_RS08715 PF13361 UvrD-like helicase C-terminal domain VY92_RS08720 PF07119 Protein of unknown function (DUF1375) VY92_RS08725 PF00113 Enolase, C-terminal TIM barrel domain VY92_RS08725 PF03952 Enolase, N-terminal domain VY92_RS08735 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VY92_RS08740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VY92_RS08745 PF02789 Cytosol aminopeptidase family, N-terminal domain VY92_RS08745 PF00883 Cytosol aminopeptidase family, catalytic domain VY92_RS08750 PF01112 Asparaginase VY92_RS08755 PF02378 Phosphotransferase system, EIIC VY92_RS08760 PF03932 CutC family VY92_RS08765 PF00873 AcrB/AcrD/AcrF family VY92_RS08770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VY92_RS08780 PF01272 Transcription elongation factor, GreA/GreB, C-term VY92_RS08780 PF03449 Transcription elongation factor, N-terminal VY92_RS08795 PF16921 Tex protein YqgF-like domain VY92_RS08795 PF17674 HHH domain VY92_RS08795 PF00575 S1 RNA binding domain VY92_RS08795 PF09371 Tex-like protein N-terminal domain VY92_RS08800 PF05525 Branched-chain amino acid transport protein VY92_RS08805 PF00581 Rhodanese-like domain VY92_RS08810 PF01040 UbiA prenyltransferase family VY92_RS08815 PF00227 Proteasome subunit VY92_RS08820 PF10431 C-terminal, D2-small domain, of ClpB protein VY92_RS08820 PF07724 AAA domain (Cdc48 subfamily) VY92_RS08820 PF00004 ATPase family associated with various cellular activities (AAA) VY92_RS08825 PF03603 DNA polymerase III psi subunit VY92_RS08830 PF00583 Acetyltransferase (GNAT) family VY92_RS08835 PF00501 AMP-binding enzyme VY92_RS08840 PF00206 Lyase VY92_RS08840 PF10415 Fumarase C C-terminus VY92_RS08845 PF06689 ClpX C4-type zinc finger VY92_RS08845 PF07724 AAA domain (Cdc48 subfamily) VY92_RS08845 PF10431 C-terminal, D2-small domain, of ClpB protein VY92_RS08850 PF00574 Clp protease VY92_RS08855 PF05698 Bacterial trigger factor protein (TF) C-terminus VY92_RS08855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VY92_RS08855 PF05697 Bacterial trigger factor protein (TF) VY92_RS08875 PF02028 BCCT, betaine/carnitine/choline family transporter VY92_RS08880 PF02080 TrkA-C domain VY92_RS08880 PF00999 Sodium/hydrogen exchanger family VY92_RS08880 PF03471 Transporter associated domain VY92_RS08885 PF01367 5'-3' exonuclease, C-terminal SAM fold VY92_RS08885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VY92_RS08885 PF00476 DNA polymerase family A VY92_RS08885 PF01612 3'-5' exonuclease VY92_RS08890 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VY92_RS08895 PF05068 Mannitol repressor VY92_RS08900 PF08125 Mannitol dehydrogenase C-terminal domain VY92_RS08900 PF01232 Mannitol dehydrogenase Rossmann domain VY92_RS08905 PF02378 Phosphotransferase system, EIIC VY92_RS08905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VY92_RS08905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VY92_RS08910 PF03544 Gram-negative bacterial TonB protein C-terminal VY92_RS08915 PF02472 Biopolymer transport protein ExbD/TolR VY92_RS08920 PF01618 MotA/TolQ/ExbB proton channel family VY92_RS08925 PF01595 Cyclin M transmembrane N-terminal domain VY92_RS08925 PF00571 CBS domain VY92_RS08925 PF03471 Transporter associated domain VY92_RS08930 PF01578 Cytochrome C assembly protein VY92_RS08935 PF02881 SRP54-type protein, helical bundle domain VY92_RS08935 PF02978 Signal peptide binding domain VY92_RS08935 PF00448 SRP54-type protein, GTPase domain VY92_RS08940 PF17347 Family of unknown function (DUF5377) VY92_RS08945 PF03889 Alternative ribosome-rescue factor A VY92_RS08950 PF03960 ArsC family VY92_RS08955 PF01594 AI-2E family transporter VY92_RS08960 PF00005 ABC transporter VY92_RS08965 PF00497 Bacterial extracellular solute-binding proteins, family 3 VY92_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS08980 PF00571 CBS domain VY92_RS08980 PF03471 Transporter associated domain VY92_RS08985 PF00795 Carbon-nitrogen hydrolase VY92_RS08990 PF02773 S-adenosylmethionine synthetase, C-terminal domain VY92_RS08990 PF02772 S-adenosylmethionine synthetase, central domain VY92_RS08990 PF00438 S-adenosylmethionine synthetase, N-terminal domain VY92_RS09000 PF03951 Glutamine synthetase, beta-Grasp domain VY92_RS09000 PF00120 Glutamine synthetase, catalytic domain VY92_RS09010 PF01061 ABC-2 type transporter VY92_RS09015 PF00005 ABC transporter VY92_RS09020 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) VY92_RS09035 PF01370 NAD dependent epimerase/dehydratase family VY92_RS09040 PF16363 GDP-mannose 4,6 dehydratase VY92_RS09045 PF00483 Nucleotidyl transferase VY92_RS09045 PF01050 Mannose-6-phosphate isomerase VY92_RS09050 PF04751 Protein of unknown function (DUF615) VY92_RS09055 PF01523 Putative modulator of DNA gyrase VY92_RS09060 PF00156 Phosphoribosyl transferase domain VY92_RS09065 PF17274 Family of unknown function (DUF5339) VY92_RS09070 PF01654 Cytochrome bd terminal oxidase subunit I VY92_RS09075 PF02322 Cytochrome bd terminal oxidase subunit II VY92_RS09085 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) VY92_RS09095 PF03061 Thioesterase superfamily VY92_RS09100 PF01618 MotA/TolQ/ExbB proton channel family VY92_RS09105 PF02472 Biopolymer transport protein ExbD/TolR VY92_RS09110 PF06519 TolA C-terminal VY92_RS09115 PF07676 WD40-like Beta Propeller Repeat VY92_RS09115 PF04052 TolB amino-terminal domain VY92_RS09120 PF00691 OmpA family VY92_RS09135 PF07963 Prokaryotic N-terminal methylation motif VY92_RS09155 PF17946 RecC C-terminal domain VY92_RS09165 PF00596 Class II Aldolase and Adducin N-terminal domain VY92_RS09170 PF01261 Xylose isomerase-like TIM barrel VY92_RS09175 PF00455 DeoR C terminal sensor domain VY92_RS09175 PF08220 DeoR-like helix-turn-helix domain VY92_RS09185 PF03611 PTS system sugar-specific permease component VY92_RS09190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VY92_RS09195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VY92_RS09200 PF03480 Bacterial extracellular solute-binding protein, family 7 VY92_RS09205 PF01344 Kelch motif VY92_RS09210 PF04977 Septum formation initiator VY92_RS09215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VY92_RS09265 PF12724 Flavodoxin domain VY92_RS09270 PF02386 Cation transport protein VY92_RS09280 PF01206 Sulfurtransferase TusA VY92_RS09285 PF00300 Histidine phosphatase superfamily (branch 1) VY92_RS09290 PF01551 Peptidase family M23 VY92_RS09295 PF04748 Divergent polysaccharide deacetylase VY92_RS09300 PF00156 Phosphoribosyl transferase domain VY92_RS09310 PF00140 Sigma-70 factor, region 1.2 VY92_RS09310 PF04545 Sigma-70, region 4 VY92_RS09310 PF04542 Sigma-70 region 2 VY92_RS09320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VY92_RS09320 PF01565 FAD binding domain VY92_RS09325 PF07730 Histidine kinase VY92_RS09325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VY92_RS09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS09325 PF00672 HAMP domain VY92_RS09330 PF03927 NapD protein VY92_RS09335 PF01568 Molydopterin dinucleotide binding domain VY92_RS09335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VY92_RS09335 PF10518 TAT (twin-arginine translocation) pathway signal sequence VY92_RS09335 PF00384 Molybdopterin oxidoreductase VY92_RS09340 PF12838 4Fe-4S dicluster domain VY92_RS09340 PF12800 4Fe-4S binding domain VY92_RS09345 PF12801 4Fe-4S binding domain VY92_RS09345 PF12837 4Fe-4S binding domain VY92_RS09350 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VY92_RS09355 PF03264 NapC/NirT cytochrome c family, N-terminal region VY92_RS09360 PF01138 3' exoribonuclease family, domain 1 VY92_RS09360 PF00575 S1 RNA binding domain VY92_RS09360 PF00013 KH domain VY92_RS09360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VY92_RS09360 PF03725 3' exoribonuclease family, domain 2 VY92_RS09375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VY92_RS09385 PF06877 Regulator of ribonuclease activity B VY92_RS09390 PF02080 TrkA-C domain VY92_RS09390 PF02254 TrkA-N domain VY92_RS09400 PF00551 Formyl transferase VY92_RS09400 PF02911 Formyl transferase, C-terminal domain VY92_RS09405 PF02661 Fic/DOC family VY92_RS09405 PF13784 Fic/DOC family N-terminal VY92_RS09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase VY92_RS09415 PF00294 pfkB family carbohydrate kinase VY92_RS09425 PF01116 Fructose-bisphosphate aldolase class-II VY92_RS09430 PF00162 Phosphoglycerate kinase VY92_RS09435 PF00445 Ribonuclease T2 family VY92_RS09440 PF00037 4Fe-4S binding domain VY92_RS09445 PF00588 SpoU rRNA Methylase family VY92_RS09445 PF08032 RNA 2'-O ribose methyltransferase substrate binding VY92_RS09450 PF13091 PLD-like domain VY92_RS09460 PF00881 Nitroreductase family VY92_RS09465 PF03605 Anaerobic c4-dicarboxylate membrane transporter VY92_RS09470 PF00581 Rhodanese-like domain VY92_RS09475 PF02556 Preprotein translocase subunit SecB VY92_RS09480 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VY92_RS09480 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VY92_RS09485 PF00132 Bacterial transferase hexapeptide (six repeats) VY92_RS09485 PF06426 Serine acetyltransferase, N-terminal VY92_RS09490 PF08501 Shikimate dehydrogenase substrate binding domain VY92_RS09495 PF00884 Sulfatase VY92_RS09495 PF08019 Phosphoethanolamine transferase EptA/EptB VY92_RS09500 PF00376 MerR family regulatory protein VY92_RS09500 PF09278 MerR, DNA binding VY92_RS09515 PF03949 Malic enzyme, NAD binding domain VY92_RS09515 PF01515 Phosphate acetyl/butaryl transferase VY92_RS09515 PF00390 Malic enzyme, N-terminal domain VY92_RS09520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VY92_RS09520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VY92_RS09525 PF00884 Sulfatase VY92_RS09530 PF01245 Ribosomal protein L19 VY92_RS09535 PF01746 tRNA (Guanine-1)-methyltransferase VY92_RS09540 PF01782 RimM N-terminal domain VY92_RS09540 PF05239 PRC-barrel domain VY92_RS09545 PF00886 Ribosomal protein S16 VY92_RS09550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VY92_RS09555 PF00535 Glycosyl transferase family 2 VY92_RS09565 PF03830 PTS system sorbose subfamily IIB component VY92_RS09565 PF03610 PTS system fructose IIA component VY92_RS09570 PF03609 PTS system sorbose-specific iic component VY92_RS09575 PF03613 PTS system mannose/fructose/sorbose family IID component VY92_RS09585 PF02655 ATP-grasp domain VY92_RS09585 PF04262 Glutamate-cysteine ligase VY92_RS09585 PF18419 ATP-grasp-like domain VY92_RS09590 PF00111 2Fe-2S iron-sulfur cluster binding domain VY92_RS09595 PF00012 Hsp70 protein VY92_RS09600 PF07743 HSCB C-terminal oligomerisation domain VY92_RS09605 PF07743 HSCB C-terminal oligomerisation domain VY92_RS09610 PF01521 Iron-sulphur cluster biosynthesis VY92_RS09615 PF01592 NifU-like N terminal domain VY92_RS09620 PF00266 Aminotransferase class-V VY92_RS09625 PF02082 Transcriptional regulator VY92_RS09630 PF00588 SpoU rRNA Methylase family VY92_RS09635 PF00459 Inositol monophosphatase family VY92_RS09640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VY92_RS09645 PF04261 Dyp-type peroxidase family VY92_RS09650 PF05175 Methyltransferase small domain VY92_RS09655 PF00270 DEAD/DEAH box helicase VY92_RS09655 PF00271 Helicase conserved C-terminal domain VY92_RS09660 PF02774 Semialdehyde dehydrogenase, dimerisation domain VY92_RS09660 PF01118 Semialdehyde dehydrogenase, NAD binding domain VY92_RS09665 PF03887 YfbU domain VY92_RS09670 PF04333 MlaA lipoprotein VY92_RS09675 PF00117 Glutamine amidotransferase class-I VY92_RS09675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VY92_RS09680 PF02567 Phenazine biosynthesis-like protein VY92_RS09685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VY92_RS09685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VY92_RS09685 PF02142 MGS-like domain VY92_RS09690 PF00543 Nitrogen regulatory protein P-II VY92_RS09695 PF00909 Ammonium Transporter Family VY92_RS09695 PF00909 Ammonium Transporter Family VY92_RS09700 PF12762 ISXO2-like transposase domain VY92_RS09705 PF04393 Protein of unknown function (DUF535) VY92_RS09710 PF05872 Bacterial protein of unknown function (DUF853) VY92_RS09715 PF13525 Outer membrane lipoprotein VY92_RS09720 PF00849 RNA pseudouridylate synthase VY92_RS09720 PF01479 S4 domain VY92_RS09730 PF03702 Anhydro-N-acetylmuramic acid kinase VY92_RS09735 PF01925 Sulfite exporter TauE/SafE VY92_RS09745 PF12804 MobA-like NTP transferase domain VY92_RS09745 PF00132 Bacterial transferase hexapeptide (six repeats) VY92_RS09750 PF05552 Conserved TM helix VY92_RS09750 PF00924 Mechanosensitive ion channel VY92_RS09755 PF02541 Ppx/GppA phosphatase family VY92_RS09760 PF04357 TamB, inner membrane protein subunit of TAM complex VY92_RS09770 PF03023 Lipid II flippase MurJ VY92_RS09775 PF01649 Ribosomal protein S20 VY92_RS09780 PF10144 Bacterial virulence factor haemolysin VY92_RS09785 PF18429 Domain of unknown function (DUF5609) VY92_RS09790 PF04461 Protein of unknown function (DUF520) VY92_RS09795 PF04445 Putative SAM-dependent methyltransferase VY92_RS09800 PF05958 tRNA (Uracil-5-)-methyltransferase VY92_RS09805 PF04219 Protein of unknown function, DUF VY92_RS09810 PF01323 DSBA-like thioredoxin domain VY92_RS09815 PF06288 Protein of unknown function (DUF1040) VY92_RS09820 PF12804 MobA-like NTP transferase domain VY92_RS09825 PF01571 Aminomethyltransferase folate-binding domain VY92_RS09830 PF03755 YicC-like family, N-terminal region VY92_RS09830 PF08340 Domain of unknown function (DUF1732) VY92_RS09835 PF03725 3' exoribonuclease family, domain 2 VY92_RS09835 PF01138 3' exoribonuclease family, domain 1 VY92_RS09840 PF00156 Phosphoribosyl transferase domain VY92_RS09845 PF05099 Tellurite resistance protein TerB VY92_RS09845 PF00226 DnaJ domain VY92_RS09850 PF01207 Dihydrouridine synthase (Dus) VY92_RS09860 PF11893 Domain of unknown function (DUF3413) VY92_RS09860 PF00884 Sulfatase VY92_RS09865 PF07208 Protein of unknown function (DUF1414) VY92_RS09870 PF04245 37-kD nucleoid-associated bacterial protein VY92_RS09875 PF04355 SmpA / OmlA family VY92_RS09880 PF00486 Transcriptional regulatory protein, C terminal VY92_RS09880 PF00072 Response regulator receiver domain VY92_RS09885 PF01184 GPR1/FUN34/yaaH family VY92_RS09890 PF05000 RNA polymerase Rpb1, domain 4 VY92_RS09890 PF04997 RNA polymerase Rpb1, domain 1 VY92_RS09890 PF00623 RNA polymerase Rpb1, domain 2 VY92_RS09890 PF04998 RNA polymerase Rpb1, domain 5 VY92_RS09890 PF04983 RNA polymerase Rpb1, domain 3 VY92_RS09895 PF04563 RNA polymerase beta subunit VY92_RS09895 PF04560 RNA polymerase Rpb2, domain 7 VY92_RS09895 PF10385 RNA polymerase beta subunit external 1 domain VY92_RS09895 PF04565 RNA polymerase Rpb2, domain 3 VY92_RS09895 PF04561 RNA polymerase Rpb2, domain 2 VY92_RS09895 PF00562 RNA polymerase Rpb2, domain 6 VY92_RS09900 PF00542 Ribosomal protein L7/L12 C-terminal domain VY92_RS09900 PF16320 Ribosomal protein L7/L12 dimerisation domain VY92_RS09905 PF00466 Ribosomal protein L10 VY92_RS09910 PF00687 Ribosomal protein L1p/L10e family VY92_RS09915 PF00298 Ribosomal protein L11, RNA binding domain VY92_RS09915 PF03946 Ribosomal protein L11, N-terminal domain VY92_RS09935 PF02357 Transcription termination factor nusG VY92_RS09935 PF00467 KOW motif VY92_RS09940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VY92_RS09945 PF03144 Elongation factor Tu domain 2 VY92_RS09945 PF03143 Elongation factor Tu C-terminal domain VY92_RS09945 PF00009 Elongation factor Tu GTP binding domain VY92_RS09950 PF00679 Elongation factor G C-terminus VY92_RS09950 PF00009 Elongation factor Tu GTP binding domain VY92_RS09950 PF03764 Elongation factor G, domain IV VY92_RS09950 PF14492 Elongation Factor G, domain II VY92_RS09950 PF03144 Elongation factor Tu domain 2 VY92_RS09955 PF00177 Ribosomal protein S7p/S5e VY92_RS09960 PF00164 Ribosomal protein S12/S23 VY92_RS09975 PF02635 DsrE/DsrF-like family VY92_RS09980 PF02635 DsrE/DsrF-like family VY92_RS09990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VY92_RS09990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VY92_RS09995 PF04102 SlyX VY92_RS10000 PF08534 Redoxin VY92_RS10000 PF00462 Glutaredoxin VY92_RS10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS10005 PF03466 LysR substrate binding domain VY92_RS10010 PF00440 Bacterial regulatory proteins, tetR family VY92_RS10015 PF12146 Serine aminopeptidase, S33 VY92_RS10020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VY92_RS10030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VY92_RS10030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VY92_RS10030 PF00205 Thiamine pyrophosphate enzyme, central domain VY92_RS10040 PF00920 Dehydratase family VY92_RS10050 PF00585 C-terminal regulatory domain of Threonine dehydratase VY92_RS10050 PF00291 Pyridoxal-phosphate dependent enzyme VY92_RS10070 PF03590 Aspartate-ammonia ligase VY92_RS10080 PF03498 Cytolethal distending toxin A/C domain VY92_RS10085 PF03372 Endonuclease/Exonuclease/phosphatase family VY92_RS10090 PF03498 Cytolethal distending toxin A/C domain VY92_RS10095 PF03968 OstA-like protein VY92_RS10095 PF04453 LPS transport system D VY92_RS10100 PF03352 Methyladenine glycosylase VY92_RS10105 PF00923 Transaldolase/Fructose-6-phosphate aldolase VY92_RS10110 PF07274 Protein of unknown function (DUF1440) VY92_RS10115 PF00293 NUDIX domain VY92_RS10120 PF00849 RNA pseudouridylate synthase VY92_RS10125 PF00180 Isocitrate/isopropylmalate dehydrogenase VY92_RS10130 PF02954 Bacterial regulatory protein, Fis family VY92_RS10135 PF01207 Dihydrouridine synthase (Dus) VY92_RS10145 PF00474 Sodium:solute symporter family VY92_RS10150 PF06196 Protein of unknown function (DUF997) VY92_RS10160 PF02785 Biotin carboxylase C-terminal domain VY92_RS10160 PF00289 Biotin carboxylase, N-terminal domain VY92_RS10160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VY92_RS10170 PF01220 Dehydroquinase class II VY92_RS10185 PF00378 Enoyl-CoA hydratase/isomerase VY92_RS10210 PF00849 RNA pseudouridylate synthase VY92_RS10210 PF01479 S4 domain VY92_RS10215 PF09106 Elongation factor SelB, winged helix VY92_RS10215 PF00009 Elongation factor Tu GTP binding domain VY92_RS10215 PF03144 Elongation factor Tu domain 2 VY92_RS10215 PF09107 Elongation factor SelB, winged helix VY92_RS10225 PF04320 Protein with unknown function (DUF469) VY92_RS10230 PF02390 Putative methyltransferase VY92_RS10235 PF13335 Magnesium chelatase, subunit ChlI C-terminal VY92_RS10235 PF01078 Magnesium chelatase, subunit ChlI VY92_RS10240 PF00282 Pyridoxal-dependent decarboxylase conserved domain VY92_RS10245 PF00202 Aminotransferase class-III VY92_RS10255 PF07219 HemY protein N-terminus VY92_RS10260 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VY92_RS10265 PF02602 Uroporphyrinogen-III synthase HemD VY92_RS10270 PF03900 Porphobilinogen deaminase, C-terminal domain VY92_RS10270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VY92_RS10275 PF12633 Adenylate cyclase NT domain VY92_RS10275 PF01295 Adenylate cyclase, class-I VY92_RS10280 PF00072 Response regulator receiver domain VY92_RS10280 PF00196 Bacterial regulatory proteins, luxR family VY92_RS10285 PF02580 D-Tyr-tRNA(Tyr) deacylase VY92_RS10290 PF03631 Virulence factor BrkB VY92_RS10295 PF02810 SEC-C motif VY92_RS10300 PF01614 Bacterial transcriptional regulator VY92_RS10300 PF09339 IclR helix-turn-helix domain VY92_RS10305 PF02615 Malate/L-lactate dehydrogenase VY92_RS10310 PF04074 YhcH/YjgK/YiaL VY92_RS10315 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VY92_RS10320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VY92_RS10325 PF03480 Bacterial extracellular solute-binding protein, family 7 VY92_RS10330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VY92_RS10330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VY92_RS10335 PF01261 Xylose isomerase-like TIM barrel VY92_RS10340 PF00596 Class II Aldolase and Adducin N-terminal domain VY92_RS10345 PF02780 Transketolase, C-terminal domain VY92_RS10345 PF00456 Transketolase, thiamine diphosphate binding domain VY92_RS10345 PF02779 Transketolase, pyrimidine binding domain VY92_RS10350 PF00005 ABC transporter VY92_RS10355 PF18075 FtsX extracellular domain VY92_RS10360 PF02594 Uncharacterised ACR, YggU family COG1872 VY92_RS10365 PF02325 YGGT family VY92_RS10370 PF01544 CorA-like Mg2+ transporter protein VY92_RS10380 PF00589 Phage integrase family VY92_RS10405 PF01734 Patatin-like phospholipase VY92_RS10415 PF02796 Helix-turn-helix domain of resolvase VY92_RS10415 PF00239 Resolvase, N terminal domain VY92_RS10425 PF08681 Protein of unknown function (DUF1778) VY92_RS10440 PF13362 Toprim domain VY92_RS10440 PF18818 Metallopeptidase superfamily domain VY92_RS10440 PF08401 Domain of unknown function (DUF1738) VY92_RS10640 PF01131 DNA topoisomerase VY92_RS10640 PF01751 Toprim domain VY92_RS10665 PF00440 Bacterial regulatory proteins, tetR family VY92_RS10670 PF07690 Major Facilitator Superfamily VY92_RS10675 PF02909 Tetracyclin repressor-like, C-terminal domain VY92_RS10675 PF00440 Bacterial regulatory proteins, tetR family VY92_RS10695 PF03616 Sodium/glutamate symporter VY92_RS10710 PF05598 Transposase domain (DUF772) VY92_RS10710 PF01609 Transposase DDE domain VY92_RS10720 PF00302 Chloramphenicol acetyltransferase VY92_RS10725 PF01609 Transposase DDE domain VY92_RS10725 PF05598 Transposase domain (DUF772) VY92_RS10735 PF00436 Single-strand binding protein family VY92_RS10770 PF00772 DnaB-like helicase N terminal domain VY92_RS10770 PF03796 DnaB-like helicase C terminal domain VY92_RS10790 PF01464 Transglycosylase SLT domain VY92_RS10790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VY92_RS10795 PF04362 Bacterial Fe(2+) trafficking VY92_RS10800 PF14815 NUDIX domain VY92_RS10800 PF00730 HhH-GPD superfamily base excision DNA repair protein VY92_RS10805 PF13407 Periplasmic binding protein domain VY92_RS10810 PF00005 ABC transporter VY92_RS10815 PF02653 Branched-chain amino acid transport system / permease component VY92_RS10820 PF03652 Holliday junction resolvase VY92_RS10825 PF02622 Uncharacterized ACR, COG1678 VY92_RS10830 PF04452 RNA methyltransferase VY92_RS10840 PF03608 PTS system enzyme II sorbitol-specific factor VY92_RS10845 PF07663 Sorbitol phosphotransferase enzyme II C-terminus VY92_RS10845 PF03612 Sorbitol phosphotransferase enzyme II N-terminus VY92_RS10850 PF03829 PTS system glucitol/sorbitol-specific IIA component VY92_RS10855 PF00106 short chain dehydrogenase VY92_RS10860 PF06923 Glucitol operon activator protein (GutM) VY92_RS10865 PF08220 DeoR-like helix-turn-helix domain VY92_RS10865 PF00455 DeoR C terminal sensor domain VY92_RS10875 PF04356 Protein of unknown function (DUF489) VY92_RS10880 PF00206 Lyase VY92_RS10880 PF08328 Adenylosuccinate lyase C-terminal VY92_RS10885 PF03553 Na+/H+ antiporter family VY92_RS10890 PF00155 Aminotransferase class I and II VY92_RS10900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VY92_RS10900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VY92_RS10905 PF12833 Helix-turn-helix domain VY92_RS10910 PF01926 50S ribosome-binding GTPase VY92_RS10915 PF06418 CTP synthase N-terminus VY92_RS10915 PF00117 Glutamine amidotransferase class-I VY92_RS10945 PF04994 TfoX C-terminal domain VY92_RS10945 PF04993 TfoX N-terminal domain VY92_RS10950 PF03350 Uncharacterized protein family, UPF0114 VY92_RS10955 PF02646 RmuC family VY92_RS10960 PF02545 Maf-like protein VY92_RS10965 PF01396 Topoisomerase DNA binding C4 zinc finger VY92_RS10970 PF01300 Telomere recombination VY92_RS10975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VY92_RS10975 PF01488 Shikimate / quinate 5-dehydrogenase VY92_RS10975 PF08501 Shikimate dehydrogenase substrate binding domain VY92_RS10980 PF00209 Sodium:neurotransmitter symporter family VY92_RS10990 PF03150 Di-haem cytochrome c peroxidase VY92_RS10990 PF00034 Cytochrome c VY92_RS10990 PF14376 Haem-binding domain VY92_RS10995 PF00664 ABC transporter transmembrane region VY92_RS10995 PF00005 ABC transporter VY92_RS11000 PF00664 ABC transporter transmembrane region VY92_RS11000 PF00005 ABC transporter VY92_RS11010 PF00986 DNA gyrase B subunit, carboxyl terminus VY92_RS11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VY92_RS11010 PF01751 Toprim domain VY92_RS11010 PF00204 DNA gyrase B VY92_RS11010 PF18053 DNA gyrase B subunit insert domain VY92_RS11015 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VY92_RS11020 PF06005 Cell division protein ZapB VY92_RS11025 PF00258 Flavodoxin VY92_RS11030 PF13932 GidA associated domain VY92_RS11030 PF01134 Glucose inhibited division protein A VY92_RS11035 PF02527 rRNA small subunit methyltransferase G VY92_RS11045 PF00119 ATP synthase A chain VY92_RS11050 PF00137 ATP synthase subunit C VY92_RS11055 PF00430 ATP synthase B/B' CF(0) VY92_RS11060 PF00213 ATP synthase delta (OSCP) subunit VY92_RS11065 PF02874 ATP synthase alpha/beta family, beta-barrel domain VY92_RS11065 PF00306 ATP synthase alpha/beta chain, C terminal domain VY92_RS11065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VY92_RS11070 PF00231 ATP synthase VY92_RS11075 PF02874 ATP synthase alpha/beta family, beta-barrel domain VY92_RS11075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VY92_RS11080 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VY92_RS11085 PF00459 Inositol monophosphatase family VY92_RS11090 PF07690 Major Facilitator Superfamily VY92_RS11105 PF12161 HsdM N-terminal domain VY92_RS11105 PF02384 N-6 DNA Methylase VY92_RS11120 PF00376 MerR family regulatory protein VY92_RS11120 PF09278 MerR, DNA binding VY92_RS11125 PF01545 Cation efflux family VY92_RS11125 PF16916 Dimerisation domain of Zinc Transporter VY92_RS11140 PF13508 Acetyltransferase (GNAT) domain VY92_RS11150 PF18273 Type III R-M EcoP15I C-terminal domain VY92_RS11150 PF01555 DNA methylase VY92_RS11155 PF08774 VRR-NUC domain VY92_RS11155 PF04851 Type III restriction enzyme, res subunit VY92_RS11160 PF01546 Peptidase family M20/M25/M40 VY92_RS11160 PF07687 Peptidase dimerisation domain VY92_RS11165 PF00156 Phosphoribosyl transferase domain VY92_RS11180 PF02142 MGS-like domain VY92_RS11180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VY92_RS11180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VY92_RS11185 PF00270 DEAD/DEAH box helicase VY92_RS11185 PF00570 HRDC domain VY92_RS11185 PF09382 RQC domain VY92_RS11185 PF16124 RecQ zinc-binding VY92_RS11185 PF00271 Helicase conserved C-terminal domain VY92_RS11190 PF01491 Frataxin-like domain VY92_RS11195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VY92_RS11195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VY92_RS11210 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VY92_RS11215 PF00682 HMGL-like VY92_RS11215 PF02436 Conserved carboxylase domain VY92_RS11215 PF00364 Biotin-requiring enzyme VY92_RS11220 PF04277 Oxaloacetate decarboxylase, gamma chain VY92_RS11230 PF00474 Sodium:solute symporter family VY92_RS11240 PF16347 Domain of unknown function (DUF4976) VY92_RS11240 PF00884 Sulfatase VY92_RS11245 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VY92_RS11245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VY92_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS11250 PF03466 LysR substrate binding domain VY92_RS11255 PF00892 EamA-like transporter family VY92_RS11260 PF03819 MazG nucleotide pyrophosphohydrolase domain VY92_RS11265 PF00582 Universal stress protein family VY92_RS11270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VY92_RS11270 PF01411 tRNA synthetases class II (A) VY92_RS11270 PF02272 DHHA1 domain VY92_RS11275 PF02599 Global regulator protein family VY92_RS11280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VY92_RS11280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VY92_RS11280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VY92_RS11280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VY92_RS11285 PF00483 Nucleotidyl transferase VY92_RS11290 PF05525 Branched-chain amino acid transport protein VY92_RS11295 PF00588 SpoU rRNA Methylase family VY92_RS11300 PF01914 MarC family integral membrane protein VY92_RS11305 PF03180 NLPA lipoprotein VY92_RS11310 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS11315 PF00005 ABC transporter VY92_RS11315 PF09383 NIL domain VY92_RS11345 PF00238 Ribosomal protein L14p/L23e VY92_RS11350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VY92_RS11350 PF00467 KOW motif VY92_RS11355 PF00281 Ribosomal protein L5 VY92_RS11355 PF00673 ribosomal L5P family C-terminus VY92_RS11360 PF00253 Ribosomal protein S14p/S29e VY92_RS11365 PF00410 Ribosomal protein S8 VY92_RS11370 PF00347 Ribosomal protein L6 VY92_RS11375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VY92_RS11380 PF00333 Ribosomal protein S5, N-terminal domain VY92_RS11380 PF03719 Ribosomal protein S5, C-terminal domain VY92_RS11385 PF00327 Ribosomal protein L30p/L7e VY92_RS11390 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VY92_RS11395 PF00344 SecY translocase VY92_RS11400 PF00444 Ribosomal protein L36 VY92_RS11405 PF00416 Ribosomal protein S13/S18 VY92_RS11410 PF00411 Ribosomal protein S11 VY92_RS11415 PF01479 S4 domain VY92_RS11415 PF00163 Ribosomal protein S4/S9 N-terminal domain VY92_RS11420 PF01000 RNA polymerase Rpb3/RpoA insert domain VY92_RS11420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VY92_RS11420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VY92_RS11425 PF01196 Ribosomal protein L17 VY92_RS11430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VY92_RS11435 PF04380 Membrane fusogenic activity VY92_RS11440 PF01467 Cytidylyltransferase-like VY92_RS11440 PF13521 AAA domain VY92_RS11445 PF00149 Calcineurin-like phosphoesterase VY92_RS11455 PF13356 Arm DNA-binding domain VY92_RS11455 PF00589 Phage integrase family VY92_RS11530 PF11867 Domain of unknown function (DUF3387) VY92_RS11530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VY92_RS11530 PF18766 SWI2/SNF2 ATPase VY92_RS11545 PF01420 Type I restriction modification DNA specificity domain VY92_RS11550 PF02384 N-6 DNA Methylase VY92_RS11555 PF03923 Uncharacterized lipoprotein VY92_RS11565 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VY92_RS11565 PF11973 NQRA C-terminal domain VY92_RS11570 PF03116 NQR2, RnfD, RnfE family VY92_RS11575 PF04205 FMN-binding domain VY92_RS11580 PF02508 Rnf-Nqr subunit, membrane protein VY92_RS11585 PF02508 Rnf-Nqr subunit, membrane protein VY92_RS11590 PF00111 2Fe-2S iron-sulfur cluster binding domain VY92_RS11590 PF00175 Oxidoreductase NAD-binding domain VY92_RS11590 PF00970 Oxidoreductase FAD-binding domain VY92_RS11595 PF02424 ApbE family VY92_RS11600 PF04400 (Na+)-NQR maturation NqrM VY92_RS11610 PF00534 Glycosyl transferases group 1 VY92_RS11610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VY92_RS11615 PF01467 Cytidylyltransferase-like VY92_RS11620 PF03616 Sodium/glutamate symporter VY92_RS11625 PF00485 Phosphoribulokinase / Uridine kinase family VY92_RS11650 PF00009 Elongation factor Tu GTP binding domain VY92_RS11650 PF03144 Elongation factor Tu domain 2 VY92_RS11650 PF03143 Elongation factor Tu C-terminal domain VY92_RS11655 PF09297 NADH pyrophosphatase zinc ribbon domain VY92_RS11655 PF00293 NUDIX domain VY92_RS11660 PF01208 Uroporphyrinogen decarboxylase (URO-D) VY92_RS11665 PF04222 Protein of unknown function (DUF416) VY92_RS11670 PF00216 Bacterial DNA-binding protein VY92_RS11675 PF08220 DeoR-like helix-turn-helix domain VY92_RS11675 PF00455 DeoR C terminal sensor domain VY92_RS11680 PF01380 SIS domain VY92_RS11690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VY92_RS11690 PF01243 Pyridoxamine 5'-phosphate oxidase VY92_RS11695 PF07690 Major Facilitator Superfamily VY92_RS11700 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VY92_RS11710 PF03888 MucB/RseB N-terminal domain VY92_RS11710 PF17188 MucB/RseB C-terminal domain VY92_RS11715 PF03872 Anti sigma-E protein RseA, N-terminal domain VY92_RS11715 PF03873 Anti sigma-E protein RseA, C-terminal domain VY92_RS11720 PF04542 Sigma-70 region 2 VY92_RS11720 PF08281 Sigma-70, region 4 VY92_RS11725 PF03937 Flavinator of succinate dehydrogenase VY92_RS11735 PF13649 Methyltransferase domain VY92_RS11750 PF07669 Eco57I restriction-modification methylase VY92_RS11755 PF04851 Type III restriction enzyme, res subunit VY92_RS11760 PF18693 TRAM domain VY92_RS11760 PF00919 Uncharacterized protein family UPF0004 VY92_RS11760 PF04055 Radical SAM superfamily VY92_RS11765 PF01451 Low molecular weight phosphotyrosine protein phosphatase VY92_RS11770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VY92_RS11770 PF07992 Pyridine nucleotide-disulphide oxidoreductase VY92_RS11775 PF01645 Conserved region in glutamate synthase VY92_RS11775 PF00310 Glutamine amidotransferases class-II VY92_RS11775 PF01493 GXGXG motif VY92_RS11775 PF04898 Glutamate synthase central domain VY92_RS11785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VY92_RS11790 PF00005 ABC transporter VY92_RS11790 PF00664 ABC transporter transmembrane region VY92_RS11795 PF00488 MutS domain V VY92_RS11795 PF05188 MutS domain II VY92_RS11795 PF01624 MutS domain I VY92_RS11795 PF05192 MutS domain III VY92_RS11795 PF05190 MutS family domain IV VY92_RS11800 PF00696 Amino acid kinase family VY92_RS11810 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VY92_RS11820 PF06545 Protein of unknown function (DUF1116) VY92_RS11825 PF00549 CoA-ligase VY92_RS11825 PF02629 CoA binding domain VY92_RS11830 PF00857 Isochorismatase family VY92_RS11835 PF03466 LysR substrate binding domain VY92_RS11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS11845 PF06545 Protein of unknown function (DUF1116) VY92_RS11850 PF00549 CoA-ligase VY92_RS11850 PF02629 CoA binding domain VY92_RS11855 PF12796 Ankyrin repeats (3 copies) VY92_RS11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VY92_RS11860 PF03466 LysR substrate binding domain VY92_RS11865 PF00154 recA bacterial DNA recombination protein VY92_RS11870 PF02631 RecX family VY92_RS11875 PF01797 Transposase IS200 like VY92_RS11880 PF07282 Putative transposase DNA-binding domain VY92_RS11880 PF01385 Probable transposase VY92_RS11880 PF12323 Helix-turn-helix domain VY92_RS11885 PF03129 Anticodon binding domain VY92_RS11885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VY92_RS11885 PF04073 Aminoacyl-tRNA editing domain VY92_RS11890 PF00005 ABC transporter VY92_RS11895 PF00528 Binding-protein-dependent transport system inner membrane component VY92_RS11900 PF00497 Bacterial extracellular solute-binding proteins, family 3 VY92_RS11905 PF04055 Radical SAM superfamily VY92_RS11905 PF06969 HemN C-terminal domain VY92_RS11910 PF10675 Protein of unknown function (DUF2489) VY92_RS11915 PF04220 Der GTPase activator (YihI) VY92_RS11920 PF00849 RNA pseudouridylate synthase VY92_RS11925 PF00176 SNF2 family N-terminal domain VY92_RS11925 PF00271 Helicase conserved C-terminal domain VY92_RS11925 PF12137 RNA polymerase recycling family C-terminal VY92_RS11925 PF18337 RapA N-terminal Tudor like domain VY92_RS11925 PF18339 RapA N-terminal Tudor like domain 1 VY92_RS11930 PF04973 Nicotinamide mononucleotide transporter VY92_RS11935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VY92_RS11935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VY92_RS11940 PF12762 ISXO2-like transposase domain VY92_RS11945 PF00171 Aldehyde dehydrogenase family VY92_RS11950 PF04962 KduI/IolB family VY92_RS11955 PF00480 ROK family VY92_RS11955 PF01047 MarR family VY92_RS11960 PF00121 Triosephosphate isomerase VY92_RS11980 PF02278 Polysaccharide lyase family 8, super-sandwich domain VY92_RS11980 PF09092 Lyase, N terminal VY92_RS11980 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VY92_RS11980 PF09093 Lyase, catalytic VY92_RS12000 PF07690 Major Facilitator Superfamily VY92_RS12005 PF00596 Class II Aldolase and Adducin N-terminal domain VY92_RS12010 PF05025 RbsD / FucU transport protein family VY92_RS12015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VY92_RS12015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VY92_RS12020 PF07882 L-fucose isomerase, second N-terminal domain VY92_RS12020 PF07881 L-fucose isomerase, first N-terminal domain VY92_RS12020 PF02952 L-fucose isomerase, C-terminal domain VY92_RS12025 PF00455 DeoR C terminal sensor domain VY92_RS12025 PF08220 DeoR-like helix-turn-helix domain VY92_RS12030 PF01791 DeoC/LacD family aldolase VY92_RS12035 PF01370 NAD dependent epimerase/dehydratase family VY92_RS12050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VY92_RS12055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VY92_RS12060 PF13580 SIS domain VY92_RS12065 PF00265 Thymidine kinase VY92_RS12075 PF00814 Glycoprotease family VY92_RS12080 PF01165 Ribosomal protein S21 VY92_RS12085 PF10410 DnaB-helicase binding domain of primase VY92_RS12085 PF08278 DNA primase DnaG DnaB-binding VY92_RS12085 PF01807 CHC2 zinc finger VY92_RS12085 PF08275 DNA primase catalytic core, N-terminal domain VY92_RS12090 PF04542 Sigma-70 region 2 VY92_RS12090 PF04539 Sigma-70 region 3 VY92_RS12090 PF00140 Sigma-70 factor, region 1.2 VY92_RS12090 PF03979 Sigma-70 factor, region 1.1 VY92_RS12090 PF04546 Sigma-70, non-essential region VY92_RS12090 PF04545 Sigma-70, region 4 VY92_RS12105 PF04175 Protein of unknown function (DUF406) VY92_RS12110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VY92_RS12110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VY92_RS12115 PF01909 Nucleotidyltransferase domain VY92_RS12120 PF08780 Nucleotidyltransferase substrate binding protein like VY92_RS12125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VY92_RS12130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VY92_RS12130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VY92_RS12135 PF00459 Inositol monophosphatase family VY92_RS12140 PF03169 OPT oligopeptide transporter protein VY92_RS12145 PF01479 S4 domain VY92_RS12150 PF01430 Hsp33 protein VY92_RS12155 PF00356 Bacterial regulatory proteins, lacI family VY92_RS12165 PF00107 Zinc-binding dehydrogenase VY92_RS12165 PF08240 Alcohol dehydrogenase GroES-like domain VY92_RS12170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VY92_RS12170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VY92_RS12175 PF00005 ABC transporter VY92_RS12180 PF02653 Branched-chain amino acid transport system / permease component VY92_RS12185 PF13407 Periplasmic binding protein domain VY92_RS12190 PF01293 Phosphoenolpyruvate carboxykinase VY92_RS12195 PF01340 Met Apo-repressor, MetJ VY92_RS12200 PF00338 Ribosomal protein S10p/S20e VY92_RS12210 PF00573 Ribosomal protein L4/L1 family VY92_RS12215 PF00276 Ribosomal protein L23 VY92_RS12220 PF00181 Ribosomal Proteins L2, RNA binding domain VY92_RS12220 PF03947 Ribosomal Proteins L2, C-terminal domain VY92_RS12225 PF00203 Ribosomal protein S19 VY92_RS12230 PF00237 Ribosomal protein L22p/L17e VY92_RS12235 PF07650 KH domain VY92_RS12235 PF00189 Ribosomal protein S3, C-terminal domain VY92_RS12240 PF00252 Ribosomal protein L16p/L10e VY92_RS12245 PF00831 Ribosomal L29 protein VY92_RS12250 PF00366 Ribosomal protein S17 VY92_RS12260 PF00589 Phage integrase family VY92_RS12260 PF13356 Arm DNA-binding domain VY92_RS12260 PF14659 Phage integrase, N-terminal SAM-like domain VY92_RS12345 PF03592 Terminase small subunit VY92_RS12410 PF02096 60Kd inner membrane protein VY92_RS12410 PF14849 YidC periplasmic domain