dqs_RS00005 SM00382 ATPases associated with a variety of cellular activities dqs_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain dqs_RS00010 SM00480 DNA polymerase III beta subunit dqs_RS00015 SM00387 Histidine kinase-like ATPases dqs_RS00015 SM00433 TopoisomeraseII dqs_RS00035 SM00487 DEAD-like helicases superfamily dqs_RS00110 SM00822 dqs_RS00110 dqs_RS00165 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain dqs_RS00180 SM00903 Flavin reductase like domain dqs_RS00255 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS00275 SM00797 Allophanate hydrolase subunit 2 dqs_RS00280 SM00796 Allophanate hydrolase subunit 1 dqs_RS00320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00320 SM00387 Histidine kinase-like ATPases dqs_RS00320 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS00325 SM00448 cheY-homologous receiver domain dqs_RS00325 SM00862 Transcriptional regulatory protein, C terminal dqs_RS00330 SM00382 ATPases associated with a variety of cellular activities dqs_RS00350 SM01359 dqs_RS00350 dqs_RS00350 SM01360 dqs_RS00350 dqs_RS00390 SM00479 dqs_RS00390 dqs_RS00410 SM00382 ATPases associated with a variety of cellular activities dqs_RS00410 SM00448 cheY-homologous receiver domain dqs_RS00415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00415 SM00387 Histidine kinase-like ATPases dqs_RS00415 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS00425 SM00327 von Willebrand factor (vWF) type A domain dqs_RS00485 SM00841 Elongation factor P, C-terminal dqs_RS00485 SM01185 dqs_RS00485 dqs_RS00495 SM00382 ATPases associated with a variety of cellular activities dqs_RS00510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS00510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS00530 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain dqs_RS00530 SM00437 Bacterial DNA topoisomerase I DNA-binding domain dqs_RS00530 SM00493 dqs_RS00530 dqs_RS00545 SM00257 Lysin motif dqs_RS00570 SM00460 Transglutaminase/protease-like homologues dqs_RS00575 SM01049 dqs_RS00575 dqs_RS00610 SM00829 Enoylreductase dqs_RS00640 SM00382 ATPases associated with a variety of cellular activities dqs_RS00645 SM00382 ATPases associated with a variety of cellular activities dqs_RS00695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS00695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS00700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00720 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS00720 SM00267 diguanylate cyclase dqs_RS00720 SM00448 cheY-homologous receiver domain dqs_RS00725 SM00448 cheY-homologous receiver domain dqs_RS00730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS00730 SM00387 Histidine kinase-like ATPases dqs_RS00740 SM00046 Diacylglycerol kinase catalytic domain (presumed) dqs_RS00750 SM00897 FIST N domain dqs_RS00750 SM01204 dqs_RS00750 dqs_RS00755 SM01228 dqs_RS00755 dqs_RS00780 SM00470 ParB-like nuclease domain dqs_RS00790 SM00563 Phosphate acyltransferases dqs_RS00800 SM00563 Phosphate acyltransferases dqs_RS00805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor dqs_RS00845 SM00382 ATPases associated with a variety of cellular activities dqs_RS00870 SM00448 cheY-homologous receiver domain dqs_RS00870 SM00862 Transcriptional regulatory protein, C terminal dqs_RS00875 SM00387 Histidine kinase-like ATPases dqs_RS00875 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS00900 SM00845 GatB domain dqs_RS00950 SM00936 Penicillin-binding protein 5, C-terminal domain dqs_RS00970 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS01045 SM00528 Domain in histone-like proteins of HNS family dqs_RS01105 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS01135 SM00344 helix_turn_helix ASNC type dqs_RS01180 SM00382 ATPases associated with a variety of cellular activities dqs_RS01385 SM00387 Histidine kinase-like ATPases dqs_RS01385 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS01390 SM00448 cheY-homologous receiver domain dqs_RS01390 SM00862 Transcriptional regulatory protein, C terminal dqs_RS01425 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS01515 SM00382 ATPases associated with a variety of cellular activities dqs_RS01550 SM00849 Metallo-beta-lactamase superfamily dqs_RS01635 SM00382 ATPases associated with a variety of cellular activities dqs_RS01640 SM00382 ATPases associated with a variety of cellular activities dqs_RS01645 SM00411 bacterial (prokaryotic) histone like domain dqs_RS01650 SM00487 DEAD-like helicases superfamily dqs_RS01650 SM00490 helicase superfamily c-terminal domain dqs_RS01745 SM00052 Putative diguanylate phosphodiesterase dqs_RS01750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS01750 SM00091 PAS domain dqs_RS01750 SM00267 diguanylate cyclase dqs_RS01835 SM00382 ATPases associated with a variety of cellular activities dqs_RS01860 SM00450 Rhodanese Homology Domain dqs_RS01870 SM00530 Helix-turn-helix XRE-family like proteins dqs_RS01935 SM00836 DALR anticodon binding domain dqs_RS01935 SM01016 Arginyl tRNA synthetase N terminal dom dqs_RS01980 SM00849 Metallo-beta-lactamase superfamily dqs_RS01985 SM00422 helix_turn_helix, mercury resistance dqs_RS02015 SM00849 Metallo-beta-lactamase superfamily dqs_RS02035 SM00448 cheY-homologous receiver domain dqs_RS02040 SM00138 Methyltransferase, chemotaxis proteins dqs_RS02050 SM00260 Two component signalling adaptor domain dqs_RS02055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS02055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS02060 SM00073 Histidine Phosphotransfer domain dqs_RS02060 SM00260 Two component signalling adaptor domain dqs_RS02060 SM00387 Histidine kinase-like ATPases dqs_RS02060 SM01231 dqs_RS02060 dqs_RS02070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS02075 SM00448 cheY-homologous receiver domain dqs_RS02145 SM00382 ATPases associated with a variety of cellular activities dqs_RS02145 SM01086 C-terminal, D2-small domain, of ClpB protein dqs_RS02155 SM00091 PAS domain dqs_RS02155 SM00267 diguanylate cyclase dqs_RS02155 SM01079 dqs_RS02155 dqs_RS02160 SM00363 S4 RNA-binding domain dqs_RS02205 SM00870 dqs_RS02205 dqs_RS02215 SM00870 dqs_RS02215 dqs_RS02220 SM00382 ATPases associated with a variety of cellular activities dqs_RS02235 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS02235 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. dqs_RS02250 SM00487 DEAD-like helicases superfamily dqs_RS02250 SM00490 helicase superfamily c-terminal domain dqs_RS02260 SM00382 ATPases associated with a variety of cellular activities dqs_RS02260 SM00448 cheY-homologous receiver domain dqs_RS02265 SM00387 Histidine kinase-like ATPases dqs_RS02265 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS02275 SM00091 PAS domain dqs_RS02275 SM00267 diguanylate cyclase dqs_RS02275 SM01079 dqs_RS02275 dqs_RS02290 SM00382 ATPases associated with a variety of cellular activities dqs_RS02300 SM00833 Cobalamin synthesis protein cobW C-terminal domain dqs_RS02310 SM00448 cheY-homologous receiver domain dqs_RS02310 SM00862 Transcriptional regulatory protein, C terminal dqs_RS02315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS02315 SM00387 Histidine kinase-like ATPases dqs_RS02315 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS02410 SM00487 DEAD-like helicases superfamily dqs_RS02410 SM00490 helicase superfamily c-terminal domain dqs_RS02445 SM00240 Forkhead associated domain dqs_RS02510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS02510 SM00091 PAS domain dqs_RS02510 SM00267 diguanylate cyclase dqs_RS02515 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS02545 SM00382 ATPases associated with a variety of cellular activities dqs_RS02555 SM00382 ATPases associated with a variety of cellular activities dqs_RS02585 SM00900 dqs_RS02585 dqs_RS02610 SM00091 PAS domain dqs_RS02610 SM00387 Histidine kinase-like ATPases dqs_RS02615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS02615 SM00382 ATPases associated with a variety of cellular activities dqs_RS02650 SM00849 Metallo-beta-lactamase superfamily dqs_RS02690 SM00671 Sel1-like repeats. dqs_RS02745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS02745 SM01049 dqs_RS02745 dqs_RS02845 SM00052 Putative diguanylate phosphodiesterase dqs_RS02845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS02845 SM00267 diguanylate cyclase dqs_RS02860 SM00387 Histidine kinase-like ATPases dqs_RS02865 SM00421 helix_turn_helix, Lux Regulon dqs_RS02865 SM00448 cheY-homologous receiver domain dqs_RS02935 SM00411 bacterial (prokaryotic) histone like domain dqs_RS02965 SM00644 dqs_RS02965 dqs_RS03205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS03205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS03230 SM00363 S4 RNA-binding domain dqs_RS03235 SM00996 S-adenosyl-L-homocysteine hydrolase dqs_RS03235 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain dqs_RS03285 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase dqs_RS03300 SM00382 ATPases associated with a variety of cellular activities dqs_RS03305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 dqs_RS03320 SM00899 dqs_RS03320 dqs_RS03335 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. dqs_RS03350 SM00382 ATPases associated with a variety of cellular activities dqs_RS03400 SM00052 Putative diguanylate phosphodiesterase dqs_RS03400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS03400 SM00091 PAS domain dqs_RS03400 SM00267 diguanylate cyclase dqs_RS03400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS03410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS03410 SM00091 PAS domain dqs_RS03430 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain dqs_RS03430 SM01080 dqs_RS03430 dqs_RS03445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS03445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS03500 SM00382 ATPases associated with a variety of cellular activities dqs_RS03515 SM00382 ATPases associated with a variety of cellular activities dqs_RS03525 SM00421 helix_turn_helix, Lux Regulon dqs_RS03545 SM00052 Putative diguanylate phosphodiesterase dqs_RS03545 SM00267 diguanylate cyclase dqs_RS03545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS03560 SM00387 Histidine kinase-like ATPases dqs_RS03560 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS03560 SM00448 cheY-homologous receiver domain dqs_RS03565 SM00421 helix_turn_helix, Lux Regulon dqs_RS03565 SM00448 cheY-homologous receiver domain dqs_RS03585 SM00382 ATPases associated with a variety of cellular activities dqs_RS03610 SM00195 Dual specificity phosphatase, catalytic domain dqs_RS03620 SM00563 Phosphate acyltransferases dqs_RS03640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain dqs_RS03675 SM00382 ATPases associated with a variety of cellular activities dqs_RS03700 SM01091 Transporter associated domain dqs_RS03705 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS03705 SM00895 dqs_RS03705 dqs_RS03725 SM00878 Biotin carboxylase C-terminal domain dqs_RS03730 SM00052 Putative diguanylate phosphodiesterase dqs_RS03730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS03730 SM00091 PAS domain dqs_RS03730 SM00267 diguanylate cyclase dqs_RS03735 SM00267 diguanylate cyclase dqs_RS03750 SM00448 cheY-homologous receiver domain dqs_RS03750 SM00862 Transcriptional regulatory protein, C terminal dqs_RS03755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS03755 SM00091 PAS domain dqs_RS03755 SM00387 Histidine kinase-like ATPases dqs_RS03755 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS03755 SM00448 cheY-homologous receiver domain dqs_RS03760 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS03795 SM00387 Histidine kinase-like ATPases dqs_RS03795 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS03800 SM00448 cheY-homologous receiver domain dqs_RS03800 SM00862 Transcriptional regulatory protein, C terminal dqs_RS03805 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS03805 SM00924 MgtE intracellular N domain dqs_RS03825 SM00955 dqs_RS03825 dqs_RS03860 SM00382 ATPases associated with a variety of cellular activities dqs_RS03860 SM00487 DEAD-like helicases superfamily dqs_RS03860 SM00490 helicase superfamily c-terminal domain dqs_RS03860 SM00847 Helicase associated domain (HA2) Add an annotation dqs_RS03890 SM00382 ATPases associated with a variety of cellular activities dqs_RS03930 SM00925 MltA specific insert domain dqs_RS03975 SM00382 ATPases associated with a variety of cellular activities dqs_RS03975 SM00448 cheY-homologous receiver domain dqs_RS03980 SM00387 Histidine kinase-like ATPases dqs_RS03980 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS03990 SM01230 dqs_RS03990 dqs_RS04000 SM00450 Rhodanese Homology Domain dqs_RS04015 SM00155 Phospholipase D. Active site motifs. dqs_RS04020 SM00881 CoA binding domain dqs_RS04075 SM01400 dqs_RS04075 dqs_RS04095 SM00028 Tetratricopeptide repeats dqs_RS04100 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain dqs_RS04100 SM01232 dqs_RS04100 dqs_RS04135 SM00382 ATPases associated with a variety of cellular activities dqs_RS04135 SM00962 SRP54-type protein, GTPase domain dqs_RS04135 SM00963 SRP54-type protein, helical bundle domain dqs_RS04140 SM00382 ATPases associated with a variety of cellular activities dqs_RS04170 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS04185 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS04185 SM01091 Transporter associated domain dqs_RS04220 SM00563 Phosphate acyltransferases dqs_RS04250 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS04295 SM00382 ATPases associated with a variety of cellular activities dqs_RS04300 SM00028 Tetratricopeptide repeats dqs_RS04310 SM00382 ATPases associated with a variety of cellular activities dqs_RS04340 SM00382 ATPases associated with a variety of cellular activities dqs_RS04385 SM00919 Malic enzyme, NAD binding domain dqs_RS04385 SM01274 dqs_RS04385 dqs_RS04400 SM00346 helix_turn_helix isocitrate lyase regulation dqs_RS04415 SM00363 S4 RNA-binding domain dqs_RS04425 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS04450 SM00382 ATPases associated with a variety of cellular activities dqs_RS04475 SM00487 DEAD-like helicases superfamily dqs_RS04475 SM00490 helicase superfamily c-terminal domain dqs_RS04490 SM01057 Eukaryotic-type carbonic anhydrase dqs_RS04495 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS04525 SM00450 Rhodanese Homology Domain dqs_RS04550 SM00563 Phosphate acyltransferases dqs_RS04590 SM00878 Biotin carboxylase C-terminal domain dqs_RS04620 SM00749 bacterial OsmY and nodulation domain dqs_RS04720 SM00842 Cell division protein FtsA dqs_RS04725 SM00864 Tubulin/FtsZ family, GTPase domain dqs_RS04725 SM00865 Tubulin/FtsZ family, C-terminal domain dqs_RS04745 SM00957 SecA DEAD-like domain dqs_RS04745 SM00958 SecA preprotein cross-linking domain dqs_RS04760 SM00331 Sigma factor PP2C-like phosphatases dqs_RS04760 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS04765 SM00028 Tetratricopeptide repeats dqs_RS04765 SM00257 Lysin motif dqs_RS04770 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS04770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS04775 SM00240 Forkhead associated domain dqs_RS04805 SM01323 dqs_RS04805 dqs_RS04850 SM01091 Transporter associated domain dqs_RS04865 SM00977 TilS substrate C-terminal domain dqs_RS04870 SM00421 helix_turn_helix, Lux Regulon dqs_RS04870 SM00448 cheY-homologous receiver domain dqs_RS04875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS04875 SM00091 PAS domain dqs_RS04875 SM00387 Histidine kinase-like ATPases dqs_RS04875 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS04900 SM00562 dqs_RS04900 dqs_RS04910 SM00028 Tetratricopeptide repeats dqs_RS04935 SM00564 beta-propeller repeat dqs_RS04940 SM00382 ATPases associated with a variety of cellular activities dqs_RS04955 SM00244 prohibitin homologues dqs_RS04960 SM00244 prohibitin homologues dqs_RS04975 SM00788 Adenylosuccinate synthetase dqs_RS04990 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS04990 SM00357 Cold shock protein domain dqs_RS04990 SM00955 dqs_RS04990 dqs_RS04995 SM00967 RNA 2'-O ribose methyltransferase substrate binding dqs_RS05000 SM01012 dqs_RS05000 dqs_RS05015 SM00382 ATPases associated with a variety of cellular activities dqs_RS05030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain dqs_RS05035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS05045 SM00052 Putative diguanylate phosphodiesterase dqs_RS05045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS05045 SM00267 diguanylate cyclase dqs_RS05085 SM00382 ATPases associated with a variety of cellular activities dqs_RS05095 SM00493 dqs_RS05095 dqs_RS05160 SM00382 ATPases associated with a variety of cellular activities dqs_RS05165 SM00883 Chaperonin 10 Kd subunit dqs_RS05175 SM00448 cheY-homologous receiver domain dqs_RS05175 SM00862 Transcriptional regulatory protein, C terminal dqs_RS05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS05180 SM00387 Histidine kinase-like ATPases dqs_RS05180 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS05195 SM00448 cheY-homologous receiver domain dqs_RS05195 SM00862 Transcriptional regulatory protein, C terminal dqs_RS05290 SM00382 ATPases associated with a variety of cellular activities dqs_RS05325 SM00937 dqs_RS05325 dqs_RS05360 SM00100 Cyclic nucleotide-monophosphate binding domain dqs_RS05360 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS05375 SM00448 cheY-homologous receiver domain dqs_RS05375 SM00850 LytTr DNA-binding domain dqs_RS05405 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS05405 SM00895 dqs_RS05405 dqs_RS05425 SM00331 Sigma factor PP2C-like phosphatases dqs_RS05425 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS05430 SM01002 Alanine dehydrogenase/PNT, C-terminal domain dqs_RS05430 SM01003 Alanine dehydrogenase/PNT, N-terminal domain dqs_RS05450 SM00052 Putative diguanylate phosphodiesterase dqs_RS05450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS05450 SM00091 PAS domain dqs_RS05450 SM00267 diguanylate cyclase dqs_RS05455 SM00487 DEAD-like helicases superfamily dqs_RS05455 SM00490 helicase superfamily c-terminal domain dqs_RS05510 SM00363 S4 RNA-binding domain dqs_RS05530 SM00822 dqs_RS05530 dqs_RS05535 SM00822 dqs_RS05535 dqs_RS05545 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS05595 SM00357 Cold shock protein domain dqs_RS05595 SM00382 ATPases associated with a variety of cellular activities dqs_RS05595 SM00959 Rho termination factor, N-terminal domain dqs_RS05610 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS05655 SM01329 dqs_RS05655 dqs_RS05660 SM00859 Semialdehyde dehydrogenase, NAD binding domain dqs_RS05745 SM00028 Tetratricopeptide repeats dqs_RS05750 SM00840 dqs_RS05750 dqs_RS05760 SM00271 DnaJ molecular chaperone homology domain dqs_RS05775 SM00434 DNA Topoisomerase IV dqs_RS05785 SM00830 Chorismate mutase type II dqs_RS05805 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS05810 SM00411 bacterial (prokaryotic) histone like domain dqs_RS05820 SM00028 Tetratricopeptide repeats dqs_RS05825 SM00984 UDP binding domain dqs_RS05845 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain dqs_RS05870 SM00873 B3/4 domain dqs_RS05870 SM00874 tRNA synthetase B5 domain dqs_RS05870 SM00896 Ferredoxin-fold anticodon binding domain dqs_RS05875 SM00411 bacterial (prokaryotic) histone like domain dqs_RS05880 SM00422 helix_turn_helix, mercury resistance dqs_RS05900 SM00257 Lysin motif dqs_RS05915 SM00460 Transglutaminase/protease-like homologues dqs_RS05925 SM00382 ATPases associated with a variety of cellular activities dqs_RS05935 SM01130 dqs_RS05935 dqs_RS05950 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. dqs_RS05985 SM00382 ATPases associated with a variety of cellular activities dqs_RS05985 SM00962 SRP54-type protein, GTPase domain dqs_RS06005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS06005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS06020 SM00434 DNA Topoisomerase IV dqs_RS06035 SM00387 Histidine kinase-like ATPases dqs_RS06035 SM00433 TopoisomeraseII dqs_RS06050 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS06095 SM00382 ATPases associated with a variety of cellular activities dqs_RS06100 SM00382 ATPases associated with a variety of cellular activities dqs_RS06120 SM00382 ATPases associated with a variety of cellular activities dqs_RS06120 SM01086 C-terminal, D2-small domain, of ClpB protein dqs_RS06130 SM00357 Cold shock protein domain dqs_RS06195 SM01329 dqs_RS06195 dqs_RS06205 SM00838 Elongation factor G C-terminus dqs_RS06205 SM00889 Elongation factor G, domain IV dqs_RS06295 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS06295 SM00895 dqs_RS06295 dqs_RS06325 SM00357 Cold shock protein domain dqs_RS06345 SM00219 Tyrosine kinase, catalytic domain dqs_RS06345 SM00331 Sigma factor PP2C-like phosphatases dqs_RS06345 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS06370 SM01235 dqs_RS06370 dqs_RS06390 SM00530 Helix-turn-helix XRE-family like proteins dqs_RS06410 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS06450 SM00861 Transketolase, pyrimidine binding domain dqs_RS06490 SM00904 Riboflavin kinase dqs_RS06500 SM00849 Metallo-beta-lactamase superfamily dqs_RS06510 SM00833 Cobalamin synthesis protein cobW C-terminal domain dqs_RS06515 SM00320 WD40 repeats dqs_RS06540 SM00382 ATPases associated with a variety of cellular activities dqs_RS06580 SM00382 ATPases associated with a variety of cellular activities dqs_RS06630 SM00382 ATPases associated with a variety of cellular activities dqs_RS06640 SM00382 ATPases associated with a variety of cellular activities dqs_RS06675 SM00646 dqs_RS06675 dqs_RS06690 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain dqs_RS06730 SM00267 diguanylate cyclase dqs_RS06730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS06740 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS06780 SM00255 Toll - interleukin 1 - resistance dqs_RS06780 SM00603 dqs_RS06780 dqs_RS06790 SM00271 DnaJ molecular chaperone homology domain dqs_RS06825 SM00382 ATPases associated with a variety of cellular activities dqs_RS06835 SM00382 ATPases associated with a variety of cellular activities dqs_RS06850 SM00052 Putative diguanylate phosphodiesterase dqs_RS06850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS06850 SM00091 PAS domain dqs_RS06850 SM00267 diguanylate cyclase dqs_RS06930 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS06930 SM00331 Sigma factor PP2C-like phosphatases dqs_RS06930 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS06940 SM00855 Phosphoglycerate mutase family dqs_RS06945 SM00880 dqs_RS06945 dqs_RS06945 SM01118 dqs_RS06945 dqs_RS07065 SM00382 ATPases associated with a variety of cellular activities dqs_RS07075 SM00978 dqs_RS07075 dqs_RS07085 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS07115 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS07130 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS07140 SM00382 ATPases associated with a variety of cellular activities dqs_RS07165 SM00822 dqs_RS07165 dqs_RS07225 SM00100 Cyclic nucleotide-monophosphate binding domain dqs_RS07225 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS07230 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS07240 SM00422 helix_turn_helix, mercury resistance dqs_RS07255 SM00052 Putative diguanylate phosphodiesterase dqs_RS07255 SM00091 PAS domain dqs_RS07255 SM00267 diguanylate cyclase dqs_RS07255 SM01049 dqs_RS07255 dqs_RS07275 SM00938 Nitrogen regulatory protein P-II dqs_RS07280 SM00463 Small MutS-related domain dqs_RS07290 SM00100 Cyclic nucleotide-monophosphate binding domain dqs_RS07290 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS07295 SM00843 dqs_RS07295 dqs_RS07305 SM00382 ATPases associated with a variety of cellular activities dqs_RS07320 SM00091 PAS domain dqs_RS07320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS07345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS07345 SM00091 PAS domain dqs_RS07345 SM00387 Histidine kinase-like ATPases dqs_RS07345 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS07350 SM00421 helix_turn_helix, Lux Regulon dqs_RS07350 SM00448 cheY-homologous receiver domain dqs_RS07360 SM01001 AIR carboxylase dqs_RS07380 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain dqs_RS07385 SM00851 MGS-like domain dqs_RS07385 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain dqs_RS07410 SM00382 ATPases associated with a variety of cellular activities dqs_RS07440 SM00382 ATPases associated with a variety of cellular activities dqs_RS07485 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region dqs_RS07490 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region dqs_RS07540 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region dqs_RS07545 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region dqs_RS07605 SM00387 Histidine kinase-like ATPases dqs_RS07615 SM00347 helix_turn_helix multiple antibiotic resistance protein dqs_RS07620 SM00849 Metallo-beta-lactamase superfamily dqs_RS07635 SM00382 ATPases associated with a variety of cellular activities dqs_RS07655 SM00478 endonuclease III dqs_RS07655 SM00525 dqs_RS07655 dqs_RS07665 SM00900 dqs_RS07665 dqs_RS07690 SM00507 HNH nucleases dqs_RS07700 SM00267 diguanylate cyclase dqs_RS07700 SM00448 cheY-homologous receiver domain dqs_RS07705 SM00052 Putative diguanylate phosphodiesterase dqs_RS07705 SM00267 diguanylate cyclase dqs_RS07705 SM00448 cheY-homologous receiver domain dqs_RS07730 SM00448 cheY-homologous receiver domain dqs_RS07735 SM00073 Histidine Phosphotransfer domain dqs_RS07735 SM00260 Two component signalling adaptor domain dqs_RS07735 SM00387 Histidine kinase-like ATPases dqs_RS07735 SM01231 dqs_RS07735 dqs_RS07740 SM00260 Two component signalling adaptor domain dqs_RS07745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS07745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS07750 SM00138 Methyltransferase, chemotaxis proteins dqs_RS07755 SM00448 cheY-homologous receiver domain dqs_RS07760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS07765 SM00260 Two component signalling adaptor domain dqs_RS07765 SM00448 cheY-homologous receiver domain dqs_RS07770 SM00260 Two component signalling adaptor domain dqs_RS07770 SM00448 cheY-homologous receiver domain dqs_RS07775 SM00448 cheY-homologous receiver domain dqs_RS07785 SM00073 Histidine Phosphotransfer domain dqs_RS07785 SM00260 Two component signalling adaptor domain dqs_RS07785 SM00387 Histidine kinase-like ATPases dqs_RS07785 SM01231 dqs_RS07785 dqs_RS07855 SM00052 Putative diguanylate phosphodiesterase dqs_RS07855 SM00267 diguanylate cyclase dqs_RS07865 SM00422 helix_turn_helix, mercury resistance dqs_RS07905 SM00052 Putative diguanylate phosphodiesterase dqs_RS07905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS07920 SM00506 Appr-1"-p processing enzyme dqs_RS07925 SM00052 Putative diguanylate phosphodiesterase dqs_RS07925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS07925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS07925 SM00091 PAS domain dqs_RS07925 SM00267 diguanylate cyclase dqs_RS07925 SM00448 cheY-homologous receiver domain dqs_RS07930 SM00448 cheY-homologous receiver domain dqs_RS07935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS07935 SM00091 PAS domain dqs_RS07935 SM00387 Histidine kinase-like ATPases dqs_RS07935 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS07960 SM00937 dqs_RS07960 dqs_RS07975 SM00671 Sel1-like repeats. dqs_RS07980 SM00671 Sel1-like repeats. dqs_RS07990 SM00421 helix_turn_helix, Lux Regulon dqs_RS07990 SM00448 cheY-homologous receiver domain dqs_RS07995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS08010 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS08025 SM00382 ATPases associated with a variety of cellular activities dqs_RS08035 SM00849 Metallo-beta-lactamase superfamily dqs_RS08065 SM00479 dqs_RS08065 dqs_RS08150 SM00052 Putative diguanylate phosphodiesterase dqs_RS08150 SM00267 diguanylate cyclase dqs_RS08165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS08175 SM00861 Transketolase, pyrimidine binding domain dqs_RS08195 SM00052 Putative diguanylate phosphodiesterase dqs_RS08195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS08195 SM00091 PAS domain dqs_RS08195 SM00267 diguanylate cyclase dqs_RS08215 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS08215 SM00866 dqs_RS08215 dqs_RS08250 SM00861 Transketolase, pyrimidine binding domain dqs_RS08275 SM00487 DEAD-like helicases superfamily dqs_RS08275 SM00491 dqs_RS08275 dqs_RS08285 SM00852 Probable molybdopterin binding domain dqs_RS08305 SM00382 ATPases associated with a variety of cellular activities dqs_RS08305 SM01086 C-terminal, D2-small domain, of ClpB protein dqs_RS08310 SM00052 Putative diguanylate phosphodiesterase dqs_RS08310 SM00267 diguanylate cyclase dqs_RS08310 SM01079 dqs_RS08310 dqs_RS08375 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS08375 SM01240 dqs_RS08375 dqs_RS08395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS08395 SM00387 Histidine kinase-like ATPases dqs_RS08395 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS08395 SM00448 cheY-homologous receiver domain dqs_RS08410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS08410 SM00091 PAS domain dqs_RS08410 SM00387 Histidine kinase-like ATPases dqs_RS08410 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS08470 SM00248 ankyrin repeats dqs_RS08485 SM00460 Transglutaminase/protease-like homologues dqs_RS08495 SM00460 Transglutaminase/protease-like homologues dqs_RS08510 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS08540 SM00487 DEAD-like helicases superfamily dqs_RS08540 SM00490 helicase superfamily c-terminal domain dqs_RS08545 SM00226 Low molecular weight phosphatase family dqs_RS08550 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS08555 SM00363 S4 RNA-binding domain dqs_RS08605 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. dqs_RS08610 SM00822 dqs_RS08610 dqs_RS08620 SM00825 Beta-ketoacyl synthase dqs_RS08655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS08695 SM00358 Double-stranded RNA binding motif dqs_RS08695 SM00535 Ribonuclease III family dqs_RS08725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 dqs_RS08725 SM00465 GIY-YIG type nucleases (URI domain) dqs_RS08850 SM00869 Autotransporter beta-domain dqs_RS08880 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS08880 SM00732 Likely ribonuclease with RNase H fold. dqs_RS08890 SM00881 CoA binding domain dqs_RS08895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS08895 SM00091 PAS domain dqs_RS08895 SM00387 Histidine kinase-like ATPases dqs_RS08895 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS08905 SM00450 Rhodanese Homology Domain dqs_RS08920 SM00382 ATPases associated with a variety of cellular activities dqs_RS08940 SM00052 Putative diguanylate phosphodiesterase dqs_RS08940 SM00267 diguanylate cyclase dqs_RS08950 SM00487 DEAD-like helicases superfamily dqs_RS08950 SM00490 helicase superfamily c-terminal domain dqs_RS08950 SM00982 dqs_RS08950 dqs_RS08950 SM01058 CarD-like/TRCF domain dqs_RS08975 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS09025 SM00954 Region found in RelA / SpoT proteins dqs_RS09045 SM00382 ATPases associated with a variety of cellular activities dqs_RS09080 SM00893 Electron transfer flavoprotein domain dqs_RS09085 SM00893 Electron transfer flavoprotein domain dqs_RS09125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS09125 SM00387 Histidine kinase-like ATPases dqs_RS09125 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS09130 SM00448 cheY-homologous receiver domain dqs_RS09130 SM00862 Transcriptional regulatory protein, C terminal dqs_RS09150 SM00986 Uracil DNA glycosylase superfamily dqs_RS09150 SM00987 UreE urease accessory protein, C-terminal domain dqs_RS09165 SM00382 ATPases associated with a variety of cellular activities dqs_RS09210 SM00642 Alpha-amylase domain dqs_RS09215 SM00642 Alpha-amylase domain dqs_RS09220 SM00642 Alpha-amylase domain dqs_RS09285 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen dqs_RS09325 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS09345 SM00749 bacterial OsmY and nodulation domain dqs_RS09350 SM00155 Phospholipase D. Active site motifs. dqs_RS09385 SM00822 dqs_RS09385 dqs_RS09400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS09405 SM00749 bacterial OsmY and nodulation domain dqs_RS09460 SM00421 helix_turn_helix, Lux Regulon dqs_RS09470 SM00644 dqs_RS09470 dqs_RS09490 SM00155 Phospholipase D. Active site motifs. dqs_RS09505 SM00014 Acid phosphatase homologues dqs_RS09545 SM00642 Alpha-amylase domain dqs_RS09555 SM00642 Alpha-amylase domain dqs_RS09565 SM00642 Alpha-amylase domain dqs_RS09570 SM00642 Alpha-amylase domain dqs_RS09615 SM00822 dqs_RS09615 dqs_RS09635 SM00382 ATPases associated with a variety of cellular activities dqs_RS09635 SM00448 cheY-homologous receiver domain dqs_RS09660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS09660 SM00091 PAS domain dqs_RS09660 SM00387 Histidine kinase-like ATPases dqs_RS09660 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS09660 SM00448 cheY-homologous receiver domain dqs_RS09680 SM00382 ATPases associated with a variety of cellular activities dqs_RS09680 SM00448 cheY-homologous receiver domain dqs_RS09740 SM00478 endonuclease III dqs_RS09780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS09785 SM00382 ATPases associated with a variety of cellular activities dqs_RS09785 SM00989 dqs_RS09785 dqs_RS09860 SM00859 Semialdehyde dehydrogenase, NAD binding domain dqs_RS09985 SM00052 Putative diguanylate phosphodiesterase dqs_RS09985 SM00267 diguanylate cyclase dqs_RS09985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS10000 SM00382 ATPases associated with a variety of cellular activities dqs_RS10020 SM00631 dqs_RS10020 dqs_RS10055 SM00967 RNA 2'-O ribose methyltransferase substrate binding dqs_RS10090 SM00935 Outer membrane protein (OmpH-like) dqs_RS10100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS10145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS10160 SM00448 cheY-homologous receiver domain dqs_RS10165 SM00387 Histidine kinase-like ATPases dqs_RS10165 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS10195 SM00893 Electron transfer flavoprotein domain dqs_RS10200 SM00893 Electron transfer flavoprotein domain dqs_RS10265 SM00347 helix_turn_helix multiple antibiotic resistance protein dqs_RS10270 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS10285 SM00903 Flavin reductase like domain dqs_RS10305 SM00903 Flavin reductase like domain dqs_RS10315 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS10335 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS10360 SM00822 dqs_RS10360 dqs_RS10400 SM00903 Flavin reductase like domain dqs_RS10410 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS10415 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS10435 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS10435 SM00895 dqs_RS10435 dqs_RS10445 SM00829 Enoylreductase dqs_RS10455 SM00859 Semialdehyde dehydrogenase, NAD binding domain dqs_RS10545 SM00382 ATPases associated with a variety of cellular activities dqs_RS10550 SM00382 ATPases associated with a variety of cellular activities dqs_RS10560 SM01007 Class II Aldolase and Adducin N-terminal domain dqs_RS10570 SM00347 helix_turn_helix multiple antibiotic resistance protein dqs_RS10580 SM00838 Elongation factor G C-terminus dqs_RS10590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 dqs_RS10590 SM00292 breast cancer carboxy-terminal domain dqs_RS10590 SM00532 Ligase N family dqs_RS10595 SM00771 ZipA, C-terminal domain (FtsZ-binding) dqs_RS10630 SM00448 cheY-homologous receiver domain dqs_RS10700 SM00533 DNA-binding domain of DNA mismatch repair MUTS family dqs_RS10700 SM00534 ATPase domain of DNA mismatch repair MUTS family dqs_RS10710 SM00479 dqs_RS10710 dqs_RS10725 SM00849 Metallo-beta-lactamase superfamily dqs_RS10730 SM00448 cheY-homologous receiver domain dqs_RS10735 SM00267 diguanylate cyclase dqs_RS10735 SM00448 cheY-homologous receiver domain dqs_RS10745 SM00382 ATPases associated with a variety of cellular activities dqs_RS10780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS10800 SM00382 ATPases associated with a variety of cellular activities dqs_RS10800 SM00464 Found in ATP-dependent protease La (LON) dqs_RS10805 SM00382 ATPases associated with a variety of cellular activities dqs_RS10805 SM00994 ClpX C4-type zinc finger dqs_RS10805 SM01086 C-terminal, D2-small domain, of ClpB protein dqs_RS10820 SM00763 PrkA AAA domain dqs_RS10840 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS10885 SM00421 helix_turn_helix, Lux Regulon dqs_RS10985 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS10985 SM00322 K homology RNA-binding domain dqs_RS10990 SM01387 dqs_RS10990 dqs_RS11010 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS11020 SM00363 S4 RNA-binding domain dqs_RS11045 SM00481 DNA polymerase alpha chain like domain dqs_RS11075 SM00357 Cold shock protein domain dqs_RS11080 SM00487 DEAD-like helicases superfamily dqs_RS11080 SM00490 helicase superfamily c-terminal domain dqs_RS11100 SM01322 dqs_RS11100 dqs_RS11110 SM00267 diguanylate cyclase dqs_RS11130 SM00382 ATPases associated with a variety of cellular activities dqs_RS11180 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS11190 SM01192 dqs_RS11190 dqs_RS11190 SM01193 dqs_RS11190 dqs_RS11260 SM01211 dqs_RS11260 dqs_RS11265 SM00014 Acid phosphatase homologues dqs_RS11285 SM00014 Acid phosphatase homologues dqs_RS11325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS11325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS11460 SM00670 Large family of predicted nucleotide-binding domains dqs_RS11465 SM00091 PAS domain dqs_RS11465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS11470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS11475 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS11480 SM00479 dqs_RS11480 dqs_RS11505 SM00382 ATPases associated with a variety of cellular activities dqs_RS11525 SM01092 CO dehydrogenase flavoprotein C-terminal domain dqs_RS11530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain dqs_RS11540 SM00382 ATPases associated with a variety of cellular activities dqs_RS11580 SM00382 ATPases associated with a variety of cellular activities dqs_RS11595 SM00052 Putative diguanylate phosphodiesterase dqs_RS11595 SM00267 diguanylate cyclase dqs_RS11600 SM00646 dqs_RS11600 dqs_RS11605 SM00052 Putative diguanylate phosphodiesterase dqs_RS11605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS11605 SM00091 PAS domain dqs_RS11605 SM00267 diguanylate cyclase dqs_RS11610 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS11630 SM00984 UDP binding domain dqs_RS11770 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS11775 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS11775 SM00895 dqs_RS11775 dqs_RS11780 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS11795 SM00382 ATPases associated with a variety of cellular activities dqs_RS11810 SM00244 prohibitin homologues dqs_RS11815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS11815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS11860 SM00248 ankyrin repeats dqs_RS11860 SM00450 Rhodanese Homology Domain dqs_RS11875 SM00260 Two component signalling adaptor domain dqs_RS11905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS11930 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS11975 SM00382 ATPases associated with a variety of cellular activities dqs_RS12000 SM00642 Alpha-amylase domain dqs_RS12030 SM00382 ATPases associated with a variety of cellular activities dqs_RS12080 SM00267 diguanylate cyclase dqs_RS12080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS12090 SM00382 ATPases associated with a variety of cellular activities dqs_RS12140 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS12140 SM00245 tail specific protease dqs_RS12210 SM00226 Low molecular weight phosphatase family dqs_RS12215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor dqs_RS12220 SM00226 Low molecular weight phosphatase family dqs_RS12245 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS12265 SM00091 PAS domain dqs_RS12265 SM00387 Histidine kinase-like ATPases dqs_RS12265 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12265 SM00448 cheY-homologous receiver domain dqs_RS12280 SM00883 Chaperonin 10 Kd subunit dqs_RS12315 SM00450 Rhodanese Homology Domain dqs_RS12320 SM00450 Rhodanese Homology Domain dqs_RS12350 SM00900 dqs_RS12350 dqs_RS12365 SM00450 Rhodanese Homology Domain dqs_RS12390 SM01007 Class II Aldolase and Adducin N-terminal domain dqs_RS12445 SM00382 ATPases associated with a variety of cellular activities dqs_RS12455 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS12465 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS12480 SM00062 Bacterial periplasmic substrate-binding proteins dqs_RS12485 SM00382 ATPases associated with a variety of cellular activities dqs_RS12535 SM00073 Histidine Phosphotransfer domain dqs_RS12535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS12535 SM00387 Histidine kinase-like ATPases dqs_RS12535 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12535 SM00448 cheY-homologous receiver domain dqs_RS12540 SM00267 diguanylate cyclase dqs_RS12540 SM00448 cheY-homologous receiver domain dqs_RS12560 SM00344 helix_turn_helix ASNC type dqs_RS12565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS12565 SM00091 PAS domain dqs_RS12565 SM00267 diguanylate cyclase dqs_RS12575 SM00479 dqs_RS12575 dqs_RS12580 SM00448 cheY-homologous receiver domain dqs_RS12585 SM00387 Histidine kinase-like ATPases dqs_RS12585 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain dqs_RS12685 SM00859 Semialdehyde dehydrogenase, NAD binding domain dqs_RS12710 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS12710 SM00895 dqs_RS12710 dqs_RS12755 SM00382 ATPases associated with a variety of cellular activities dqs_RS12755 SM00989 dqs_RS12755 dqs_RS12760 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS12770 SM00448 cheY-homologous receiver domain dqs_RS12770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS12775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS12775 SM00091 PAS domain dqs_RS12775 SM00387 Histidine kinase-like ATPases dqs_RS12775 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12775 SM00448 cheY-homologous receiver domain dqs_RS12800 SM00448 cheY-homologous receiver domain dqs_RS12805 SM00091 PAS domain dqs_RS12805 SM00387 Histidine kinase-like ATPases dqs_RS12805 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS12810 SM00091 PAS domain dqs_RS12810 SM00387 Histidine kinase-like ATPases dqs_RS12810 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12815 SM00421 helix_turn_helix, Lux Regulon dqs_RS12865 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS12910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS12910 SM00382 ATPases associated with a variety of cellular activities dqs_RS12940 SM00382 ATPases associated with a variety of cellular activities dqs_RS12945 SM01116 dqs_RS12945 dqs_RS12955 SM00849 Metallo-beta-lactamase superfamily dqs_RS12980 SM00073 Histidine Phosphotransfer domain dqs_RS12980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS12980 SM00091 PAS domain dqs_RS12980 SM00387 Histidine kinase-like ATPases dqs_RS12980 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS12980 SM00448 cheY-homologous receiver domain dqs_RS12990 SM00448 cheY-homologous receiver domain dqs_RS12990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS13025 SM00893 Electron transfer flavoprotein domain dqs_RS13030 SM00893 Electron transfer flavoprotein domain dqs_RS13050 SM00822 dqs_RS13050 dqs_RS13075 SM00382 ATPases associated with a variety of cellular activities dqs_RS13080 SM00382 ATPases associated with a variety of cellular activities dqs_RS13115 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS13130 SM01006 Siderophore biosynthesis protein domain dqs_RS13145 SM00965 Secretin and TonB N terminus short domain dqs_RS13215 SM00052 Putative diguanylate phosphodiesterase dqs_RS13215 SM00091 PAS domain dqs_RS13215 SM00267 diguanylate cyclase dqs_RS13215 SM00387 Histidine kinase-like ATPases dqs_RS13215 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS13215 SM00448 cheY-homologous receiver domain dqs_RS13220 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS13240 SM00849 Metallo-beta-lactamase superfamily dqs_RS13325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS13325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS13370 SM00112 Cadherin repeats. dqs_RS13370 SM00736 Dystroglycan-type cadherin-like domains. dqs_RS13425 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS13435 SM00052 Putative diguanylate phosphodiesterase dqs_RS13435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS13435 SM00091 PAS domain dqs_RS13435 SM00267 diguanylate cyclase dqs_RS13475 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS13480 SM00073 Histidine Phosphotransfer domain dqs_RS13480 SM00387 Histidine kinase-like ATPases dqs_RS13480 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS13480 SM00448 cheY-homologous receiver domain dqs_RS13530 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS13595 SM00028 Tetratricopeptide repeats dqs_RS13620 SM00357 Cold shock protein domain dqs_RS13645 SM01007 Class II Aldolase and Adducin N-terminal domain dqs_RS13665 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS13665 SM00267 diguanylate cyclase dqs_RS13695 SM00422 helix_turn_helix, mercury resistance dqs_RS13715 SM00267 diguanylate cyclase dqs_RS13765 SM00267 diguanylate cyclase dqs_RS13825 SM00271 DnaJ molecular chaperone homology domain dqs_RS13845 SM00867 YceI-like domain dqs_RS13850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor dqs_RS13870 SM00421 helix_turn_helix, Lux Regulon dqs_RS13870 SM00448 cheY-homologous receiver domain dqs_RS13875 SM00387 Histidine kinase-like ATPases dqs_RS13875 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS13890 SM00052 Putative diguanylate phosphodiesterase dqs_RS13890 SM00267 diguanylate cyclase dqs_RS13905 SM00945 ProQ/FINO family dqs_RS13915 SM00267 diguanylate cyclase dqs_RS13920 SM00267 diguanylate cyclase dqs_RS13975 SM00028 Tetratricopeptide repeats dqs_RS14020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS14020 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS14020 SM00091 PAS domain dqs_RS14020 SM00267 diguanylate cyclase dqs_RS14030 SM00382 ATPases associated with a variety of cellular activities dqs_RS14030 SM00448 cheY-homologous receiver domain dqs_RS14035 SM00387 Histidine kinase-like ATPases dqs_RS14035 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS14055 SM00382 ATPases associated with a variety of cellular activities dqs_RS14120 SM00047 Lysozyme subfamily 2 dqs_RS14165 SM00858 dqs_RS14165 dqs_RS14185 SM00448 cheY-homologous receiver domain dqs_RS14185 SM00862 Transcriptional regulatory protein, C terminal dqs_RS14190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS14190 SM00387 Histidine kinase-like ATPases dqs_RS14190 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS14200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS14200 SM00091 PAS domain dqs_RS14200 SM00387 Histidine kinase-like ATPases dqs_RS14205 SM00421 helix_turn_helix, Lux Regulon dqs_RS14205 SM00448 cheY-homologous receiver domain dqs_RS14230 SM00450 Rhodanese Homology Domain dqs_RS14240 SM00363 S4 RNA-binding domain dqs_RS14300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS14300 SM00387 Histidine kinase-like ATPases dqs_RS14300 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS14310 SM00382 ATPases associated with a variety of cellular activities dqs_RS14310 SM00448 cheY-homologous receiver domain dqs_RS14315 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS14360 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain dqs_RS14385 SM00382 ATPases associated with a variety of cellular activities dqs_RS14420 SM00852 Probable molybdopterin binding domain dqs_RS14450 SM00855 Phosphoglycerate mutase family dqs_RS14455 SM00387 Histidine kinase-like ATPases dqs_RS14455 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS14460 SM00448 cheY-homologous receiver domain dqs_RS14460 SM00862 Transcriptional regulatory protein, C terminal dqs_RS14470 SM00893 Electron transfer flavoprotein domain dqs_RS14475 SM00893 Electron transfer flavoprotein domain dqs_RS14515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS14515 SM00245 tail specific protease dqs_RS14525 SM00855 Phosphoglycerate mutase family dqs_RS14530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor dqs_RS14535 SM00450 Rhodanese Homology Domain dqs_RS14570 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS14570 SM00876 Biotin and Thiamin Synthesis associated domain dqs_RS14590 SM01004 Delta-aminolevulinic acid dehydratase dqs_RS14610 SM00852 Probable molybdopterin binding domain dqs_RS14630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS14630 SM00091 PAS domain dqs_RS14630 SM00267 diguanylate cyclase dqs_RS14665 SM00861 Transketolase, pyrimidine binding domain dqs_RS14670 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain dqs_RS14705 SM00564 beta-propeller repeat dqs_RS14715 SM00382 ATPases associated with a variety of cellular activities dqs_RS14730 SM00267 diguanylate cyclase dqs_RS14785 SM00327 von Willebrand factor (vWF) type A domain dqs_RS14805 SM00327 von Willebrand factor (vWF) type A domain dqs_RS14815 SM00091 PAS domain dqs_RS14815 SM00267 diguanylate cyclase dqs_RS14835 SM00867 YceI-like domain dqs_RS14840 SM00867 YceI-like domain dqs_RS14855 SM00953 dqs_RS14855 dqs_RS14880 SM00052 Putative diguanylate phosphodiesterase dqs_RS14880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS14880 SM00091 PAS domain dqs_RS14880 SM00267 diguanylate cyclase dqs_RS14895 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS14905 SM00650 Ribosomal RNA adenine dimethylases dqs_RS14925 SM00587 ZnF_C4 abd HLH domain containing kinases domain dqs_RS14935 SM01011 Aminopeptidase P, N-terminal domain dqs_RS14955 SM00798 AICARFT/IMPCHase bienzyme dqs_RS14955 SM00851 MGS-like domain dqs_RS14960 SM01209 dqs_RS14960 dqs_RS14960 SM01210 dqs_RS14960 dqs_RS15035 SM00382 ATPases associated with a variety of cellular activities dqs_RS15100 SM00382 ATPases associated with a variety of cellular activities dqs_RS15135 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain dqs_RS15145 SM00382 ATPases associated with a variety of cellular activities dqs_RS15210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS15210 SM00387 Histidine kinase-like ATPases dqs_RS15210 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS15215 SM00448 cheY-homologous receiver domain dqs_RS15215 SM00862 Transcriptional regulatory protein, C terminal dqs_RS15310 SM01049 dqs_RS15310 dqs_RS15315 SM00421 helix_turn_helix, Lux Regulon dqs_RS15315 SM00448 cheY-homologous receiver domain dqs_RS15320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS15325 SM00564 beta-propeller repeat dqs_RS15340 SM00564 beta-propeller repeat dqs_RS15350 SM00849 Metallo-beta-lactamase superfamily dqs_RS15360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS15360 SM00387 Histidine kinase-like ATPases dqs_RS15365 SM00421 helix_turn_helix, Lux Regulon dqs_RS15365 SM00448 cheY-homologous receiver domain dqs_RS15370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS15370 SM00897 FIST N domain dqs_RS15370 SM01204 dqs_RS15370 dqs_RS15385 SM00248 ankyrin repeats dqs_RS15485 SM00893 Electron transfer flavoprotein domain dqs_RS15490 SM00893 Electron transfer flavoprotein domain dqs_RS15505 SM00530 Helix-turn-helix XRE-family like proteins dqs_RS15510 SM01230 dqs_RS15510 dqs_RS15530 SM00938 Nitrogen regulatory protein P-II dqs_RS15550 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS15565 SM00564 beta-propeller repeat dqs_RS15610 SM00382 ATPases associated with a variety of cellular activities dqs_RS15640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain dqs_RS15645 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region dqs_RS15660 SM00829 Enoylreductase dqs_RS15680 SM00382 ATPases associated with a variety of cellular activities dqs_RS15685 SM00382 ATPases associated with a variety of cellular activities dqs_RS15725 SM00530 Helix-turn-helix XRE-family like proteins dqs_RS15755 SM00052 Putative diguanylate phosphodiesterase dqs_RS15755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS15755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS15755 SM00091 PAS domain dqs_RS15755 SM00267 diguanylate cyclase dqs_RS15770 SM00344 helix_turn_helix ASNC type dqs_RS15790 SM00878 Biotin carboxylase C-terminal domain dqs_RS15855 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS15865 SM00100 Cyclic nucleotide-monophosphate binding domain dqs_RS15865 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS15910 SM00327 von Willebrand factor (vWF) type A domain dqs_RS15915 SM00100 Cyclic nucleotide-monophosphate binding domain dqs_RS15915 SM00419 helix_turn_helix, cAMP Regulatory protein dqs_RS15935 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS15970 SM00382 ATPases associated with a variety of cellular activities dqs_RS15975 SM00710 Parallel beta-helix repeats dqs_RS15975 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses dqs_RS15985 SM00900 dqs_RS15985 dqs_RS16060 SM00853 MutL C terminal dimerisation domain dqs_RS16060 SM01340 dqs_RS16060 dqs_RS16160 SM00116 Domain in cystathionine beta-synthase and other proteins. dqs_RS16175 SM00831 Cation transporter/ATPase, N-terminus dqs_RS16220 SM00448 cheY-homologous receiver domain dqs_RS16220 SM00862 Transcriptional regulatory protein, C terminal dqs_RS16225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS16225 SM00387 Histidine kinase-like ATPases dqs_RS16225 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS16240 SM00917 LeuA allosteric (dimerisation) domain dqs_RS16280 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase dqs_RS16330 SM00267 diguanylate cyclase dqs_RS16330 SM00448 cheY-homologous receiver domain dqs_RS16335 SM00829 Enoylreductase dqs_RS16355 SM00382 ATPases associated with a variety of cellular activities dqs_RS16375 SM00671 Sel1-like repeats. dqs_RS16380 SM00984 UDP binding domain dqs_RS16385 SM00028 Tetratricopeptide repeats dqs_RS16390 SM00382 ATPases associated with a variety of cellular activities dqs_RS16390 SM00448 cheY-homologous receiver domain dqs_RS16395 SM00387 Histidine kinase-like ATPases dqs_RS16495 SM00481 DNA polymerase alpha chain like domain dqs_RS16500 SM00829 Enoylreductase dqs_RS16510 SM00919 Malic enzyme, NAD binding domain dqs_RS16510 SM01274 dqs_RS16510 dqs_RS16560 SM00528 Domain in histone-like proteins of HNS family dqs_RS16565 SM00905 Dihydroneopterin aldolase dqs_RS16570 SM01207 dqs_RS16570 dqs_RS16585 SM00400 zinc finger dqs_RS16585 SM00493 dqs_RS16585 dqs_RS16585 SM00766 DNA primase DnaG DnaB-binding dqs_RS16605 SM00852 Probable molybdopterin binding domain dqs_RS16615 SM00382 ATPases associated with a variety of cellular activities dqs_RS16615 SM00962 SRP54-type protein, GTPase domain dqs_RS16615 SM00963 SRP54-type protein, helical bundle domain dqs_RS16625 SM00382 ATPases associated with a variety of cellular activities dqs_RS16640 SM00834 Putative regulatory protein dqs_RS16655 SM00448 cheY-homologous receiver domain dqs_RS16800 SM00984 UDP binding domain dqs_RS16850 SM00382 ATPases associated with a variety of cellular activities dqs_RS16885 SM00382 ATPases associated with a variety of cellular activities dqs_RS16895 SM00849 Metallo-beta-lactamase superfamily dqs_RS16895 SM01027 Beta-Casp domain dqs_RS16985 SM00422 helix_turn_helix, mercury resistance dqs_RS17030 SM00829 Enoylreductase dqs_RS17035 SM00341 Helicase and RNase D C-terminal dqs_RS17035 SM00487 DEAD-like helicases superfamily dqs_RS17035 SM00490 helicase superfamily c-terminal domain dqs_RS17035 SM00956 dqs_RS17035 dqs_RS17085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. dqs_RS17085 SM00382 ATPases associated with a variety of cellular activities dqs_RS17090 SM00849 Metallo-beta-lactamase superfamily dqs_RS17095 SM00240 Forkhead associated domain dqs_RS17100 SM00331 Sigma factor PP2C-like phosphatases dqs_RS17100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS17105 SM00881 CoA binding domain dqs_RS17130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS17190 SM00644 dqs_RS17190 dqs_RS17200 SM00028 Tetratricopeptide repeats dqs_RS17205 SM00382 ATPases associated with a variety of cellular activities dqs_RS17225 SM00382 ATPases associated with a variety of cellular activities dqs_RS17225 SM00448 cheY-homologous receiver domain dqs_RS17230 SM00387 Histidine kinase-like ATPases dqs_RS17230 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS17250 SM01007 Class II Aldolase and Adducin N-terminal domain dqs_RS17345 SM00849 Metallo-beta-lactamase superfamily dqs_RS17355 SM00052 Putative diguanylate phosphodiesterase dqs_RS17355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS17355 SM00091 PAS domain dqs_RS17355 SM00267 diguanylate cyclase dqs_RS17355 SM00448 cheY-homologous receiver domain dqs_RS17360 SM00448 cheY-homologous receiver domain dqs_RS17365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS17365 SM00091 PAS domain dqs_RS17365 SM00387 Histidine kinase-like ATPases dqs_RS17365 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS17405 SM00662 RNA polymerases D dqs_RS17410 SM00363 S4 RNA-binding domain dqs_RS17410 SM01390 dqs_RS17410 dqs_RS17425 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS17475 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. dqs_RS17480 SM01374 dqs_RS17480 dqs_RS17500 SM00322 K homology RNA-binding domain dqs_RS17515 SM01382 dqs_RS17515 dqs_RS17515 SM01383 dqs_RS17515 dqs_RS17535 SM01403 dqs_RS17535 dqs_RS17545 SM00838 Elongation factor G C-terminus dqs_RS17545 SM00889 Elongation factor G, domain IV dqs_RS17560 SM00663 RNA polymerase I subunit A N-terminus dqs_RS17585 SM00649 Ribosomal protein L11/L12 dqs_RS17590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. dqs_RS17590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. dqs_RS17645 SM00421 helix_turn_helix, Lux Regulon dqs_RS17645 SM00448 cheY-homologous receiver domain dqs_RS17655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS17655 SM00387 Histidine kinase-like ATPases dqs_RS17655 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS17655 SM00448 cheY-homologous receiver domain dqs_RS17675 SM00382 ATPases associated with a variety of cellular activities dqs_RS17695 SM00382 ATPases associated with a variety of cellular activities dqs_RS17730 SM00448 cheY-homologous receiver domain dqs_RS17735 SM00448 cheY-homologous receiver domain dqs_RS17740 SM00260 Two component signalling adaptor domain dqs_RS17745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS17750 SM00073 Histidine Phosphotransfer domain dqs_RS17750 SM00260 Two component signalling adaptor domain dqs_RS17750 SM00387 Histidine kinase-like ATPases dqs_RS17750 SM00448 cheY-homologous receiver domain dqs_RS17750 SM01231 dqs_RS17750 dqs_RS17765 SM00732 Likely ribonuclease with RNase H fold. dqs_RS17785 SM01152 dqs_RS17785 dqs_RS17805 SM00382 ATPases associated with a variety of cellular activities dqs_RS17840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS17840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS17850 SM00981 dqs_RS17850 dqs_RS17875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain dqs_RS17925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS17925 SM00387 Histidine kinase-like ATPases dqs_RS17925 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS17930 SM00382 ATPases associated with a variety of cellular activities dqs_RS17930 SM00448 cheY-homologous receiver domain dqs_RS17955 SM00387 Histidine kinase-like ATPases dqs_RS17960 SM00052 Putative diguanylate phosphodiesterase dqs_RS17960 SM00091 PAS domain dqs_RS17960 SM00267 diguanylate cyclase dqs_RS17960 SM00448 cheY-homologous receiver domain dqs_RS17980 SM00988 UreE urease accessory protein, N-terminal domain dqs_RS18030 SM00382 ATPases associated with a variety of cellular activities dqs_RS18040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor dqs_RS18075 SM00487 DEAD-like helicases superfamily dqs_RS18075 SM00490 helicase superfamily c-terminal domain dqs_RS18080 SM00917 LeuA allosteric (dimerisation) domain dqs_RS18095 SM00849 Metallo-beta-lactamase superfamily dqs_RS18100 SM00052 Putative diguanylate phosphodiesterase dqs_RS18100 SM00267 diguanylate cyclase dqs_RS18165 SM00345 helix_turn_helix gluconate operon transcriptional repressor dqs_RS18230 SM00382 ATPases associated with a variety of cellular activities dqs_RS18275 SM00855 Phosphoglycerate mutase family dqs_RS18325 SM00382 ATPases associated with a variety of cellular activities dqs_RS18445 SM00382 ATPases associated with a variety of cellular activities dqs_RS18465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs dqs_RS18465 SM00474 3'-5' exonuclease dqs_RS18465 SM00475 5'-3' exonuclease dqs_RS18465 SM00482 DNA polymerase A domain dqs_RS18480 SM00986 Uracil DNA glycosylase superfamily dqs_RS18480 SM00987 UreE urease accessory protein, C-terminal domain dqs_RS18525 SM00316 Ribosomal protein S1-like RNA-binding domain dqs_RS18540 SM00448 cheY-homologous receiver domain dqs_RS18540 SM00862 Transcriptional regulatory protein, C terminal dqs_RS18545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS18545 SM00387 Histidine kinase-like ATPases dqs_RS18545 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS18550 SM00054 EF-hand, calcium binding motif dqs_RS18560 SM00240 Forkhead associated domain dqs_RS18575 SM00829 Enoylreductase dqs_RS18595 SM00671 Sel1-like repeats. dqs_RS18630 SM00382 ATPases associated with a variety of cellular activities dqs_RS18685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS18700 SM00965 Secretin and TonB N terminus short domain dqs_RS18720 SM00842 Cell division protein FtsA dqs_RS18730 SM01219 dqs_RS18730 dqs_RS18760 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family dqs_RS18790 SM00052 Putative diguanylate phosphodiesterase dqs_RS18790 SM00267 diguanylate cyclase dqs_RS18790 SM00448 cheY-homologous receiver domain dqs_RS18795 SM00387 Histidine kinase-like ATPases dqs_RS18795 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS18825 SM00448 cheY-homologous receiver domain dqs_RS18825 SM00862 Transcriptional regulatory protein, C terminal dqs_RS18830 SM00387 Histidine kinase-like ATPases dqs_RS18830 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS18835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. dqs_RS18875 SM00849 Metallo-beta-lactamase superfamily dqs_RS18880 SM00346 helix_turn_helix isocitrate lyase regulation dqs_RS18890 SM00073 Histidine Phosphotransfer domain dqs_RS18890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS18890 SM00091 PAS domain dqs_RS18890 SM00387 Histidine kinase-like ATPases dqs_RS18890 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS18890 SM00448 cheY-homologous receiver domain dqs_RS18895 SM00448 cheY-homologous receiver domain dqs_RS18895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS18920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS18920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS18990 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS19075 SM01018 B12 binding domain dqs_RS19110 SM00382 ATPases associated with a variety of cellular activities dqs_RS19115 SM00382 ATPases associated with a variety of cellular activities dqs_RS19125 SM00382 ATPases associated with a variety of cellular activities dqs_RS19140 SM00938 Nitrogen regulatory protein P-II dqs_RS19165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS19170 SM00382 ATPases associated with a variety of cellular activities dqs_RS19200 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS19285 SM01060 dqs_RS19285 dqs_RS19295 SM00257 Lysin motif dqs_RS19315 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS19330 SM00267 diguanylate cyclase dqs_RS19340 SM00382 ATPases associated with a variety of cellular activities dqs_RS19390 SM00530 Helix-turn-helix XRE-family like proteins dqs_RS19400 SM00382 ATPases associated with a variety of cellular activities dqs_RS19470 SM00382 ATPases associated with a variety of cellular activities dqs_RS19470 SM00448 cheY-homologous receiver domain dqs_RS19490 SM00267 diguanylate cyclase dqs_RS19495 SM00091 PAS domain dqs_RS19495 SM00387 Histidine kinase-like ATPases dqs_RS19495 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS19500 SM00903 Flavin reductase like domain dqs_RS19505 SM00478 endonuclease III dqs_RS19510 SM00464 Found in ATP-dependent protease La (LON) dqs_RS19525 SM00342 helix_turn_helix, arabinose operon control protein dqs_RS19560 SM00849 Metallo-beta-lactamase superfamily dqs_RS19575 SM00382 ATPases associated with a variety of cellular activities dqs_RS19585 SM00420 helix_turn_helix, Deoxyribose operon repressor dqs_RS19585 SM01134 dqs_RS19585 dqs_RS19615 SM00382 ATPases associated with a variety of cellular activities dqs_RS19650 SM00052 Putative diguanylate phosphodiesterase dqs_RS19650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) dqs_RS19650 SM00091 PAS domain dqs_RS19650 SM00267 diguanylate cyclase dqs_RS19655 SM00382 ATPases associated with a variety of cellular activities dqs_RS19680 SM00098 Alkaline phosphatase homologues dqs_RS19705 SM01329 dqs_RS19705 dqs_RS19730 SM00564 beta-propeller repeat dqs_RS19745 SM00861 Transketolase, pyrimidine binding domain dqs_RS19780 SM00382 ATPases associated with a variety of cellular activities dqs_RS19825 SM00240 Forkhead associated domain dqs_RS19830 SM00331 Sigma factor PP2C-like phosphatases dqs_RS19830 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS19845 SM00219 Tyrosine kinase, catalytic domain dqs_RS19920 SM00382 ATPases associated with a variety of cellular activities dqs_RS19920 SM01086 C-terminal, D2-small domain, of ClpB protein dqs_RS19940 SM00028 Tetratricopeptide repeats dqs_RS19945 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS19950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS19960 SM00825 Beta-ketoacyl synthase dqs_RS19975 SM00822 dqs_RS19975 dqs_RS19985 SM00859 Semialdehyde dehydrogenase, NAD binding domain dqs_RS19995 SM00563 Phosphate acyltransferases dqs_RS20020 SM00344 helix_turn_helix ASNC type dqs_RS20030 SM01005 Alanine racemase, C-terminal domain dqs_RS20040 SM00028 Tetratricopeptide repeats dqs_RS20080 SM00382 ATPases associated with a variety of cellular activities dqs_RS20085 SM00091 PAS domain dqs_RS20085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). dqs_RS20110 SM00926 Molybdopterin oxidoreductase Fe4S4 domain dqs_RS20125 SM00387 Histidine kinase-like ATPases dqs_RS20125 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS20125 SM00448 cheY-homologous receiver domain dqs_RS20130 SM00448 cheY-homologous receiver domain dqs_RS20135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS20135 SM00387 Histidine kinase-like ATPases dqs_RS20135 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS20140 SM00479 dqs_RS20140 dqs_RS20155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. dqs_RS20155 SM00954 Region found in RelA / SpoT proteins dqs_RS20160 SM01409 dqs_RS20160 dqs_RS20165 SM00072 Guanylate kinase homologues. dqs_RS20185 SM00481 DNA polymerase alpha chain like domain dqs_RS20195 SM00422 helix_turn_helix, mercury resistance dqs_RS20205 SM00220 Serine/Threonine protein kinases, catalytic domain dqs_RS20210 SM00331 Sigma factor PP2C-like phosphatases dqs_RS20210 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain dqs_RS20225 SM00729 Elongator protein 3, MiaB family, Radical SAM dqs_RS20285 SM00947 Carbonic anhydrase dqs_RS20290 SM00487 DEAD-like helicases superfamily dqs_RS20290 SM00490 helicase superfamily c-terminal domain dqs_RS20310 SM00448 cheY-homologous receiver domain dqs_RS20315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain dqs_RS20315 SM00387 Histidine kinase-like ATPases dqs_RS20315 SM00388 His Kinase A (phosphoacceptor) domain dqs_RS20350 SM01234 dqs_RS20350