locus-tag class description DSUI_RS00005 PF04715 Anthranilate synthase component I, N terminal region DSUI_RS00005 PF00425 chorismate binding enzyme DSUI_RS00010 PF01206 Sulfurtransferase TusA DSUI_RS00015 PF01435 Peptidase family M48 DSUI_RS00020 PF01967 MoaC family DSUI_RS00035 PF00313 'Cold-shock' DNA-binding domain DSUI_RS00040 PF02617 ATP-dependent Clp protease adaptor protein ClpS DSUI_RS00045 PF17871 AAA lid domain DSUI_RS00045 PF02861 Clp amino terminal domain, pathogenicity island component DSUI_RS00045 PF10431 C-terminal, D2-small domain, of ClpB protein DSUI_RS00045 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS00045 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS00050 PF03737 Aldolase/RraA DSUI_RS00055 PF00463 Isocitrate lyase family DSUI_RS00070 PF03458 UPF0126 domain DSUI_RS00080 PF03466 LysR substrate binding domain DSUI_RS00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS00085 PF13419 Haloacid dehalogenase-like hydrolase DSUI_RS00090 PF01925 Sulfite exporter TauE/SafE DSUI_RS00095 PF01274 Malate synthase DSUI_RS00100 PF13344 Haloacid dehalogenase-like hydrolase DSUI_RS00100 PF18407 GCN5-related N-acetyltransferase like domain DSUI_RS00115 PF00202 Aminotransferase class-III DSUI_RS00130 PF01595 Cyclin M transmembrane N-terminal domain DSUI_RS00130 PF03471 Transporter associated domain DSUI_RS00130 PF00571 CBS domain DSUI_RS00135 PF03788 LrgA family DSUI_RS00140 PF04172 LrgB-like family DSUI_RS00150 PF01027 Inhibitor of apoptosis-promoting Bax1 DSUI_RS00155 PF00893 Small Multidrug Resistance protein DSUI_RS00160 PF02146 Sir2 family DSUI_RS00165 PF01435 Peptidase family M48 DSUI_RS00180 PF03544 Gram-negative bacterial TonB protein C-terminal DSUI_RS00185 PF02515 CoA-transferase family III DSUI_RS00190 PF01230 HIT domain DSUI_RS00195 PF00398 Ribosomal RNA adenine dimethylase DSUI_RS00220 PF03372 Endonuclease/Exonuclease/phosphatase family DSUI_RS00230 PF01432 Peptidase family M3 DSUI_RS00240 PF01259 SAICAR synthetase DSUI_RS00250 PF01116 Fructose-bisphosphate aldolase class-II DSUI_RS00255 PF00881 Nitroreductase family DSUI_RS00260 PF02887 Pyruvate kinase, alpha/beta domain DSUI_RS00260 PF00224 Pyruvate kinase, barrel domain DSUI_RS00270 PF02397 Bacterial sugar transferase DSUI_RS00275 PF00534 Glycosyl transferases group 1 DSUI_RS00275 PF13439 Glycosyltransferase Family 4 DSUI_RS00290 PF01531 Glycosyl transferase family 11 DSUI_RS00300 PF16363 GDP-mannose 4,6 dehydratase DSUI_RS00305 PF00534 Glycosyl transferases group 1 DSUI_RS00305 PF13439 Glycosyltransferase Family 4 DSUI_RS00310 PF00892 EamA-like transporter family DSUI_RS00330 PF04989 Cephalosporin hydroxylase DSUI_RS00340 PF01370 NAD dependent epimerase/dehydratase family DSUI_RS00345 PF08421 Putative zinc binding domain DSUI_RS00345 PF08484 C-methyltransferase C-terminal domain DSUI_RS00350 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DSUI_RS00355 PF16363 GDP-mannose 4,6 dehydratase DSUI_RS00360 PF00483 Nucleotidyl transferase DSUI_RS00380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DSUI_RS00390 PF03102 NeuB family DSUI_RS00390 PF08666 SAF domain DSUI_RS00405 PF02348 Cytidylyltransferase DSUI_RS00410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DSUI_RS00415 PF02719 Polysaccharide biosynthesis protein DSUI_RS00420 PF00664 ABC transporter transmembrane region DSUI_RS00420 PF00005 ABC transporter DSUI_RS00425 PF16363 GDP-mannose 4,6 dehydratase DSUI_RS00430 PF01370 NAD dependent epimerase/dehydratase family DSUI_RS00435 PF01050 Mannose-6-phosphate isomerase DSUI_RS00435 PF00483 Nucleotidyl transferase DSUI_RS00445 PF00672 HAMP domain DSUI_RS00445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS00445 PF17200 Single Cache domain 2 DSUI_RS00450 PF01300 Telomere recombination DSUI_RS00450 PF03481 Putative GTP-binding controlling metal-binding DSUI_RS00455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DSUI_RS00455 PF02222 ATP-grasp domain DSUI_RS00460 PF00731 AIR carboxylase DSUI_RS00465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DSUI_RS00465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DSUI_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS00480 PF00672 HAMP domain DSUI_RS00480 PF17200 Single Cache domain 2 DSUI_RS00495 PF04972 BON domain DSUI_RS00500 PF13580 SIS domain DSUI_RS00525 PF00171 Aldehyde dehydrogenase family DSUI_RS00530 PF04305 Protein of unknown function (DUF455) DSUI_RS00535 PF02163 Peptidase family M50 DSUI_RS00535 PF17820 PDZ domain DSUI_RS00540 PF04397 LytTr DNA-binding domain DSUI_RS00540 PF00072 Response regulator receiver domain DSUI_RS00545 PF06580 Histidine kinase DSUI_RS00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS00550 PF14698 Argininosuccinate lyase C-terminal DSUI_RS00550 PF00206 Lyase DSUI_RS00555 PF00069 Protein kinase domain DSUI_RS00555 PF03793 PASTA domain DSUI_RS00565 PF00909 Ammonium Transporter Family DSUI_RS00580 PF08447 PAS fold DSUI_RS00580 PF13426 PAS domain DSUI_RS00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS00585 PF00462 Glutaredoxin DSUI_RS00590 PF05175 Methyltransferase small domain DSUI_RS00590 PF17827 PrmC N-terminal domain DSUI_RS00595 PF00472 RF-1 domain DSUI_RS00595 PF03462 PCRF domain DSUI_RS00600 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DSUI_RS00600 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DSUI_RS00600 PF01488 Shikimate / quinate 5-dehydrogenase DSUI_RS00605 PF02580 D-Tyr-tRNA(Tyr) deacylase DSUI_RS00615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSUI_RS00615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSUI_RS00620 PF00171 Aldehyde dehydrogenase family DSUI_RS00625 PF13183 4Fe-4S dicluster domain DSUI_RS00625 PF11870 Domain of unknown function (DUF3390) DSUI_RS00625 PF02589 LUD domain DSUI_RS00630 PF09339 IclR helix-turn-helix domain DSUI_RS00630 PF01614 Bacterial transcriptional regulator DSUI_RS00635 PF00768 D-alanyl-D-alanine carboxypeptidase DSUI_RS00645 PF01515 Phosphate acetyl/butaryl transferase DSUI_RS00645 PF03949 Malic enzyme, NAD binding domain DSUI_RS00645 PF00390 Malic enzyme, N-terminal domain DSUI_RS00650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DSUI_RS00650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DSUI_RS00655 PF00155 Aminotransferase class I and II DSUI_RS00665 PF01510 N-acetylmuramoyl-L-alanine amidase DSUI_RS00670 PF00158 Sigma-54 interaction domain DSUI_RS00670 PF00072 Response regulator receiver domain DSUI_RS00670 PF02954 Bacterial regulatory protein, Fis family DSUI_RS00675 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS00685 PF09459 Ethylbenzene dehydrogenase DSUI_RS00690 PF03264 NapC/NirT cytochrome c family, N-terminal region DSUI_RS00695 PF06778 Chlorite dismutase DSUI_RS00700 PF02613 Nitrate reductase delta subunit DSUI_RS00705 PF13247 4Fe-4S dicluster domain DSUI_RS00710 PF00384 Molybdopterin oxidoreductase DSUI_RS00710 PF01568 Molydopterin dinucleotide binding domain DSUI_RS00720 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS00720 PF00989 PAS fold DSUI_RS00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS00730 PF06532 Negative regulator of sigma F DSUI_RS00735 PF08281 Sigma-70, region 4 DSUI_RS00735 PF04542 Sigma-70 region 2 DSUI_RS00740 PF01292 Prokaryotic cytochrome b561 DSUI_RS00745 PF00174 Oxidoreductase molybdopterin binding domain DSUI_RS00760 PF00348 Polyprenyl synthetase DSUI_RS00765 PF00829 Ribosomal prokaryotic L21 protein DSUI_RS00770 PF01016 Ribosomal L27 protein DSUI_RS00775 PF01018 GTP1/OBG DSUI_RS00775 PF01926 50S ribosome-binding GTPase DSUI_RS00780 PF00696 Amino acid kinase family DSUI_RS00780 PF01472 PUA domain DSUI_RS00785 PF13609 Gram-negative porin DSUI_RS00790 PF00218 Indole-3-glycerol phosphate synthase DSUI_RS00795 PF00591 Glycosyl transferase family, a/b domain DSUI_RS00795 PF02885 Glycosyl transferase family, helical bundle domain DSUI_RS00800 PF00117 Glutamine amidotransferase class-I DSUI_RS00835 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DSUI_RS00875 PF00717 Peptidase S24-like DSUI_RS00905 PF05866 Endodeoxyribonuclease RusA DSUI_RS01040 PF13356 Arm DNA-binding domain DSUI_RS01040 PF00589 Phage integrase family DSUI_RS01040 PF14659 Phage integrase, N-terminal SAM-like domain DSUI_RS01045 PF04715 Anthranilate synthase component I, N terminal region DSUI_RS01045 PF00425 chorismate binding enzyme DSUI_RS01050 PF13419 Haloacid dehalogenase-like hydrolase DSUI_RS01055 PF00834 Ribulose-phosphate 3 epimerase family DSUI_RS01060 PF04379 ApaG domain DSUI_RS01065 PF01209 ubiE/COQ5 methyltransferase family DSUI_RS01070 PF03466 LysR substrate binding domain DSUI_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS01075 PF01960 ArgJ family DSUI_RS01080 PF07516 SecA Wing and Scaffold domain DSUI_RS01080 PF01043 SecA preprotein cross-linking domain DSUI_RS01080 PF07517 SecA DEAD-like domain DSUI_RS01080 PF02810 SEC-C motif DSUI_RS01085 PF01551 Peptidase family M23 DSUI_RS01085 PF08525 Opacity-associated protein A N-terminal motif DSUI_RS01085 PF01476 LysM domain DSUI_RS01100 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DSUI_RS01105 PF00091 Tubulin/FtsZ family, GTPase domain DSUI_RS01105 PF12327 FtsZ family, C-terminal domain DSUI_RS01110 PF02491 SHS2 domain inserted in FTSA DSUI_RS01115 PF08478 POTRA domain, FtsQ-type DSUI_RS01115 PF03799 Cell division protein FtsQ DSUI_RS01120 PF07478 D-ala D-ala ligase C-terminus DSUI_RS01120 PF01820 D-ala D-ala ligase N-terminus DSUI_RS01125 PF08245 Mur ligase middle domain DSUI_RS01125 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS01125 PF01225 Mur ligase family, catalytic domain DSUI_RS01130 PF04101 Glycosyltransferase family 28 C-terminal domain DSUI_RS01130 PF03033 Glycosyltransferase family 28 N-terminal domain DSUI_RS01135 PF01098 Cell cycle protein DSUI_RS01140 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS01140 PF08245 Mur ligase middle domain DSUI_RS01145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DSUI_RS01145 PF00953 Glycosyl transferase family 4 DSUI_RS01150 PF01225 Mur ligase family, catalytic domain DSUI_RS01150 PF08245 Mur ligase middle domain DSUI_RS01150 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS01155 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS01155 PF08245 Mur ligase middle domain DSUI_RS01155 PF01225 Mur ligase family, catalytic domain DSUI_RS01160 PF03717 Penicillin-binding Protein dimerisation domain DSUI_RS01160 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS01165 PF04999 Cell division protein FtsL DSUI_RS01170 PF01795 MraW methylase family DSUI_RS01175 PF02381 MraZ protein, putative antitoxin-like DSUI_RS01190 PF01979 Amidohydrolase family DSUI_RS01195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS01200 PF02021 Uncharacterised protein family UPF0102 DSUI_RS01210 PF01479 S4 domain DSUI_RS01210 PF00579 tRNA synthetases class I (W and Y) DSUI_RS01220 PF00255 Glutathione peroxidase DSUI_RS01225 PF02649 Type I GTP cyclohydrolase folE2 DSUI_RS01230 PF00005 ABC transporter DSUI_RS01230 PF17850 CysA C-terminal regulatory domain DSUI_RS01230 PF12857 TOBE-like domain DSUI_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS01250 PF00563 EAL domain DSUI_RS01250 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS01250 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS01255 PF14376 Haem-binding domain DSUI_RS01255 PF00034 Cytochrome c DSUI_RS01255 PF03150 Di-haem cytochrome c peroxidase DSUI_RS01265 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS01270 PF00072 Response regulator receiver domain DSUI_RS01270 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS01275 PF13533 Biotin-lipoyl like DSUI_RS01280 PF00005 ABC transporter DSUI_RS01295 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS01295 PF00072 Response regulator receiver domain DSUI_RS01300 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS01300 PF02702 Osmosensitive K+ channel His kinase sensor domain DSUI_RS01300 PF13492 GAF domain DSUI_RS01300 PF13493 Domain of unknown function (DUF4118) DSUI_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS01315 PF02669 K+-transporting ATPase, c chain DSUI_RS01325 PF03814 Potassium-transporting ATPase A subunit DSUI_RS01330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DSUI_RS01335 PF00118 TCP-1/cpn60 chaperonin family DSUI_RS01340 PF00166 Chaperonin 10 Kd subunit DSUI_RS01345 PF00557 Metallopeptidase family M24 DSUI_RS01365 PF04341 Protein of unknown function, DUF485 DSUI_RS01370 PF00474 Sodium:solute symporter family DSUI_RS01390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DSUI_RS01405 PF17746 SfsA N-terminal OB domain DSUI_RS01405 PF03749 Sugar fermentation stimulation protein RE domain DSUI_RS01410 PF00027 Cyclic nucleotide-binding domain DSUI_RS01410 PF00520 Ion transport protein DSUI_RS01430 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DSUI_RS01435 PF01040 UbiA prenyltransferase family DSUI_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS01445 PF03466 LysR substrate binding domain DSUI_RS01455 PF00672 HAMP domain DSUI_RS01455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS01460 PF07690 Major Facilitator Superfamily DSUI_RS01465 PF00271 Helicase conserved C-terminal domain DSUI_RS01465 PF00270 DEAD/DEAH box helicase DSUI_RS01470 PF03061 Thioesterase superfamily DSUI_RS01475 PF17191 RecG wedge domain DSUI_RS01475 PF00271 Helicase conserved C-terminal domain DSUI_RS01475 PF00270 DEAD/DEAH box helicase DSUI_RS01480 PF01042 Endoribonuclease L-PSP DSUI_RS01505 PF00108 Thiolase, N-terminal domain DSUI_RS01505 PF02803 Thiolase, C-terminal domain DSUI_RS01510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSUI_RS01510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSUI_RS01510 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS01515 PF00501 AMP-binding enzyme DSUI_RS01515 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS01520 PF12833 Helix-turn-helix domain DSUI_RS01520 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DSUI_RS01525 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DSUI_RS01530 PF03061 Thioesterase superfamily DSUI_RS01535 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS01535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSUI_RS01535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSUI_RS01540 PF02645 Uncharacterised protein, DegV family COG1307 DSUI_RS01545 PF00108 Thiolase, N-terminal domain DSUI_RS01545 PF02803 Thiolase, C-terminal domain DSUI_RS01550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSUI_RS01550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSUI_RS01550 PF09317 Domain of unknown function (DUF1974) DSUI_RS01555 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS01555 PF18665 Tetracyclin repressor-like, C-terminal domain DSUI_RS01560 PF00664 ABC transporter transmembrane region DSUI_RS01560 PF00005 ABC transporter DSUI_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS01565 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS01565 PF00989 PAS fold DSUI_RS01570 PF00072 Response regulator receiver domain DSUI_RS01575 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS01575 PF00989 PAS fold DSUI_RS01580 PF01196 Ribosomal protein L17 DSUI_RS01585 PF01000 RNA polymerase Rpb3/RpoA insert domain DSUI_RS01585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DSUI_RS01585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DSUI_RS01590 PF01479 S4 domain DSUI_RS01590 PF00163 Ribosomal protein S4/S9 N-terminal domain DSUI_RS01595 PF00411 Ribosomal protein S11 DSUI_RS01600 PF00416 Ribosomal protein S13/S18 DSUI_RS01605 PF01176 Translation initiation factor 1A / IF-1 DSUI_RS01610 PF00344 SecY translocase DSUI_RS01615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DSUI_RS01620 PF00327 Ribosomal protein L30p/L7e DSUI_RS01625 PF03719 Ribosomal protein S5, C-terminal domain DSUI_RS01625 PF00333 Ribosomal protein S5, N-terminal domain DSUI_RS01630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DSUI_RS01635 PF00347 Ribosomal protein L6 DSUI_RS01640 PF00410 Ribosomal protein S8 DSUI_RS01645 PF00253 Ribosomal protein S14p/S29e DSUI_RS01650 PF00281 Ribosomal protein L5 DSUI_RS01650 PF00673 ribosomal L5P family C-terminus DSUI_RS01655 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DSUI_RS01660 PF00238 Ribosomal protein L14p/L23e DSUI_RS01665 PF00366 Ribosomal protein S17 DSUI_RS01670 PF00831 Ribosomal L29 protein DSUI_RS01675 PF00252 Ribosomal protein L16p/L10e DSUI_RS01680 PF00189 Ribosomal protein S3, C-terminal domain DSUI_RS01680 PF07650 KH domain DSUI_RS01685 PF00237 Ribosomal protein L22p/L17e DSUI_RS01690 PF00203 Ribosomal protein S19 DSUI_RS01695 PF00181 Ribosomal Proteins L2, RNA binding domain DSUI_RS01695 PF03947 Ribosomal Proteins L2, C-terminal domain DSUI_RS01700 PF00276 Ribosomal protein L23 DSUI_RS01705 PF00573 Ribosomal protein L4/L1 family DSUI_RS01710 PF00297 Ribosomal protein L3 DSUI_RS01715 PF00338 Ribosomal protein S10p/S20e DSUI_RS01720 PF00009 Elongation factor Tu GTP binding domain DSUI_RS01720 PF03143 Elongation factor Tu C-terminal domain DSUI_RS01720 PF03144 Elongation factor Tu domain 2 DSUI_RS01725 PF00009 Elongation factor Tu GTP binding domain DSUI_RS01725 PF03144 Elongation factor Tu domain 2 DSUI_RS01725 PF03764 Elongation factor G, domain IV DSUI_RS01725 PF14492 Elongation Factor G, domain II DSUI_RS01725 PF00679 Elongation factor G C-terminus DSUI_RS01730 PF00177 Ribosomal protein S7p/S5e DSUI_RS01735 PF00164 Ribosomal protein S12/S23 DSUI_RS01740 PF04983 RNA polymerase Rpb1, domain 3 DSUI_RS01740 PF00623 RNA polymerase Rpb1, domain 2 DSUI_RS01740 PF04998 RNA polymerase Rpb1, domain 5 DSUI_RS01740 PF04997 RNA polymerase Rpb1, domain 1 DSUI_RS01740 PF05000 RNA polymerase Rpb1, domain 4 DSUI_RS01745 PF04563 RNA polymerase beta subunit DSUI_RS01745 PF04561 RNA polymerase Rpb2, domain 2 DSUI_RS01745 PF04560 RNA polymerase Rpb2, domain 7 DSUI_RS01745 PF00562 RNA polymerase Rpb2, domain 6 DSUI_RS01745 PF10385 RNA polymerase beta subunit external 1 domain DSUI_RS01745 PF04565 RNA polymerase Rpb2, domain 3 DSUI_RS01750 PF16320 Ribosomal protein L7/L12 dimerisation domain DSUI_RS01750 PF00542 Ribosomal protein L7/L12 C-terminal domain DSUI_RS01755 PF00466 Ribosomal protein L10 DSUI_RS01760 PF00687 Ribosomal protein L1p/L10e family DSUI_RS01765 PF00298 Ribosomal protein L11, RNA binding domain DSUI_RS01765 PF03946 Ribosomal protein L11, N-terminal domain DSUI_RS01770 PF00467 KOW motif DSUI_RS01770 PF02357 Transcription termination factor nusG DSUI_RS01775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DSUI_RS01785 PF03143 Elongation factor Tu C-terminal domain DSUI_RS01785 PF03144 Elongation factor Tu domain 2 DSUI_RS01785 PF00009 Elongation factor Tu GTP binding domain DSUI_RS01805 PF01565 FAD binding domain DSUI_RS01805 PF02913 FAD linked oxidases, C-terminal domain DSUI_RS01820 PF00672 HAMP domain DSUI_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS01820 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS01825 PF00072 Response regulator receiver domain DSUI_RS01825 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS01835 PF08245 Mur ligase middle domain DSUI_RS01835 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS01835 PF01225 Mur ligase family, catalytic domain DSUI_RS01845 PF08534 Redoxin DSUI_RS01850 PF01220 Dehydroquinase class II DSUI_RS01855 PF00364 Biotin-requiring enzyme DSUI_RS01860 PF02785 Biotin carboxylase C-terminal domain DSUI_RS01860 PF00289 Biotin carboxylase, N-terminal domain DSUI_RS01860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSUI_RS01875 PF01219 Prokaryotic diacylglycerol kinase DSUI_RS01880 PF00534 Glycosyl transferases group 1 DSUI_RS01880 PF13439 Glycosyltransferase Family 4 DSUI_RS01885 PF00294 pfkB family carbohydrate kinase DSUI_RS01905 PF16363 GDP-mannose 4,6 dehydratase DSUI_RS01910 PF00149 Calcineurin-like phosphoesterase DSUI_RS01915 PF02719 Polysaccharide biosynthesis protein DSUI_RS01920 PF01370 NAD dependent epimerase/dehydratase family DSUI_RS01925 PF00535 Glycosyl transferase family 2 DSUI_RS01930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSUI_RS01935 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DSUI_RS01935 PF00534 Glycosyl transferases group 1 DSUI_RS01940 PF02321 Outer membrane efflux protein DSUI_RS01955 PF00873 AcrB/AcrD/AcrF family DSUI_RS01960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS01965 PF16925 Tetracyclin repressor-like, C-terminal domain DSUI_RS01965 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS01970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSUI_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS01980 PF12911 N-terminal TM domain of oligopeptide transport permease C DSUI_RS01980 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS01985 PF00005 ABC transporter DSUI_RS01985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSUI_RS01990 PF00005 ABC transporter DSUI_RS01990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSUI_RS01995 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS01995 PF07729 FCD domain DSUI_RS02005 PF13593 SBF-like CPA transporter family (DUF4137) DSUI_RS02015 PF00155 Aminotransferase class I and II DSUI_RS02015 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS02020 PF00194 Eukaryotic-type carbonic anhydrase DSUI_RS02025 PF01964 Radical SAM ThiC family DSUI_RS02025 PF13667 ThiC-associated domain DSUI_RS02030 PF01594 AI-2E family transporter DSUI_RS02035 PF09364 XFP N-terminal domain DSUI_RS02035 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DSUI_RS02035 PF09363 XFP C-terminal domain DSUI_RS02040 PF03692 Putative zinc- or iron-chelating domain DSUI_RS02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS02045 PF03466 LysR substrate binding domain DSUI_RS02050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DSUI_RS02060 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS02070 PF00892 EamA-like transporter family DSUI_RS02080 PF01136 Peptidase family U32 DSUI_RS02080 PF16325 Peptidase family U32 C-terminal domain DSUI_RS02085 PF00575 S1 RNA binding domain DSUI_RS02085 PF10150 Ribonuclease E/G family DSUI_RS02095 PF01738 Dienelactone hydrolase family DSUI_RS02100 PF00171 Aldehyde dehydrogenase family DSUI_RS02105 PF00877 NlpC/P60 family DSUI_RS02120 PF01769 Divalent cation transporter DSUI_RS02120 PF00571 CBS domain DSUI_RS02120 PF03448 MgtE intracellular N domain DSUI_RS02125 PF00912 Transglycosylase DSUI_RS02130 PF01488 Shikimate / quinate 5-dehydrogenase DSUI_RS02130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DSUI_RS02130 PF08501 Shikimate dehydrogenase substrate binding domain DSUI_RS02140 PF03544 Gram-negative bacterial TonB protein C-terminal DSUI_RS02145 PF00575 S1 RNA binding domain DSUI_RS02145 PF17876 Cold shock domain DSUI_RS02145 PF00773 RNB domain DSUI_RS02145 PF08206 Ribonuclease B OB domain DSUI_RS02150 PF05728 Uncharacterised protein family (UPF0227) DSUI_RS02160 PF02673 Bacitracin resistance protein BacA DSUI_RS02165 PF02545 Maf-like protein DSUI_RS02170 PF02590 Predicted SPOUT methyltransferase DSUI_RS02180 PF01467 Cytidylyltransferase-like DSUI_RS02195 PF01636 Phosphotransferase enzyme family DSUI_RS02205 PF03641 Possible lysine decarboxylase DSUI_RS02210 PF00476 DNA polymerase family A DSUI_RS02210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DSUI_RS02210 PF01367 5'-3' exonuclease, C-terminal SAM fold DSUI_RS02210 PF01612 3'-5' exonuclease DSUI_RS02220 PF08323 Starch synthase catalytic domain DSUI_RS02220 PF00534 Glycosyl transferases group 1 DSUI_RS02245 PF13439 Glycosyltransferase Family 4 DSUI_RS02245 PF00534 Glycosyl transferases group 1 DSUI_RS02250 PF00005 ABC transporter DSUI_RS02250 PF00664 ABC transporter transmembrane region DSUI_RS02255 PF00534 Glycosyl transferases group 1 DSUI_RS02255 PF13439 Glycosyltransferase Family 4 DSUI_RS02260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSUI_RS02270 PF02654 Cobalamin-5-phosphate synthase DSUI_RS02275 PF02277 Phosphoribosyltransferase DSUI_RS02280 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DSUI_RS02290 PF07238 PilZ domain DSUI_RS02295 PF04055 Radical SAM superfamily DSUI_RS02305 PF00691 OmpA family DSUI_RS02310 PF04052 TolB amino-terminal domain DSUI_RS02310 PF07676 WD40-like Beta Propeller Repeat DSUI_RS02320 PF02472 Biopolymer transport protein ExbD/TolR DSUI_RS02325 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS02330 PF03061 Thioesterase superfamily DSUI_RS02335 PF05491 RuvB C-terminal winged helix domain DSUI_RS02335 PF05496 Holliday junction DNA helicase RuvB P-loop domain DSUI_RS02335 PF17864 RuvB AAA lid domain DSUI_RS02340 PF01330 RuvA N terminal domain DSUI_RS02340 PF07499 RuvA, C-terminal domain DSUI_RS02345 PF02075 Crossover junction endodeoxyribonuclease RuvC DSUI_RS02360 PF01709 Transcriptional regulator DSUI_RS02365 PF05872 Bacterial protein of unknown function (DUF853) DSUI_RS02370 PF06969 HemN C-terminal domain DSUI_RS02370 PF04055 Radical SAM superfamily DSUI_RS02375 PF01725 Ham1 family DSUI_RS02385 PF01138 3' exoribonuclease family, domain 1 DSUI_RS02385 PF03725 3' exoribonuclease family, domain 2 DSUI_RS02395 PF00069 Protein kinase domain DSUI_RS02395 PF03793 PASTA domain DSUI_RS02400 PF08340 Domain of unknown function (DUF1732) DSUI_RS02400 PF03755 YicC-like family, N-terminal region DSUI_RS02405 PF00625 Guanylate kinase DSUI_RS02410 PF01192 RNA polymerase Rpb6 DSUI_RS02415 PF02824 TGS domain DSUI_RS02415 PF04607 Region found in RelA / SpoT proteins DSUI_RS02415 PF13291 ACT domain DSUI_RS02420 PF01266 FAD dependent oxidoreductase DSUI_RS02425 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS02430 PF01026 TatD related DNase DSUI_RS02435 PF01062 Bestrophin, RFP-TM, chloride channel DSUI_RS02440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DSUI_RS02440 PF14489 QueF-like protein DSUI_RS02455 PF01568 Molydopterin dinucleotide binding domain DSUI_RS02455 PF00384 Molybdopterin oxidoreductase DSUI_RS02455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSUI_RS02460 PF12838 4Fe-4S dicluster domain DSUI_RS02460 PF12800 4Fe-4S binding domain DSUI_RS02465 PF12801 4Fe-4S binding domain DSUI_RS02465 PF00037 4Fe-4S binding domain DSUI_RS02470 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DSUI_RS02480 PF00563 EAL domain DSUI_RS02480 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS02480 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS02495 PF02785 Biotin carboxylase C-terminal domain DSUI_RS02495 PF00289 Biotin carboxylase, N-terminal domain DSUI_RS02495 PF18140 Propionyl-coenzyme A carboxylase BT domain DSUI_RS02495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSUI_RS02495 PF00364 Biotin-requiring enzyme DSUI_RS02500 PF01039 Carboxyl transferase domain DSUI_RS02510 PF02310 B12 binding domain DSUI_RS02510 PF01642 Methylmalonyl-CoA mutase DSUI_RS02515 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS02515 PF07729 FCD domain DSUI_RS02520 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS02525 PF00474 Sodium:solute symporter family DSUI_RS02530 PF04341 Protein of unknown function, DUF485 DSUI_RS02535 PF01925 Sulfite exporter TauE/SafE DSUI_RS02545 PF05164 Cell division protein ZapA DSUI_RS02555 PF00593 TonB dependent receptor DSUI_RS02555 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS02560 PF01032 FecCD transport family DSUI_RS02565 PF00005 ABC transporter DSUI_RS02570 PF12557 Cob(I)alamin adenosyltransferase N terminal DSUI_RS02570 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DSUI_RS02575 PF07685 CobB/CobQ-like glutamine amidotransferase domain DSUI_RS02575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DSUI_RS02590 PF08448 PAS fold DSUI_RS02590 PF00072 Response regulator receiver domain DSUI_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS02590 PF13188 PAS domain DSUI_RS02590 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS02605 PF01497 Periplasmic binding protein DSUI_RS02610 PF00155 Aminotransferase class I and II DSUI_RS02615 PF03186 CobD/Cbib protein DSUI_RS02620 PF07685 CobB/CobQ-like glutamine amidotransferase domain DSUI_RS02625 PF00390 Malic enzyme, N-terminal domain DSUI_RS02625 PF03949 Malic enzyme, NAD binding domain DSUI_RS02625 PF01515 Phosphate acetyl/butaryl transferase DSUI_RS02650 PF04143 Sulphur transport DSUI_RS02655 PF06508 Queuosine biosynthesis protein QueC DSUI_RS02660 PF00148 Nitrogenase component 1 type Oxidoreductase DSUI_RS02660 PF04324 BFD-like [2Fe-2S] binding domain DSUI_RS02665 PF00148 Nitrogenase component 1 type Oxidoreductase DSUI_RS02670 PF02579 Dinitrogenase iron-molybdenum cofactor DSUI_RS02675 PF03270 Protein of unknown function, DUF269 DSUI_RS02680 PF05082 Rop-like DSUI_RS02690 PF12838 4Fe-4S dicluster domain DSUI_RS02695 PF04891 NifQ DSUI_RS02705 PF03831 PhnA domain DSUI_RS02705 PF08274 PhnA Zinc-Ribbon DSUI_RS02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS02710 PF03459 TOBE domain DSUI_RS02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS02715 PF03459 TOBE domain DSUI_RS02725 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS02730 PF00005 ABC transporter DSUI_RS02730 PF03459 TOBE domain DSUI_RS02740 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DSUI_RS02740 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DSUI_RS02750 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS02750 PF08448 PAS fold DSUI_RS02750 PF05231 MASE1 DSUI_RS02750 PF13426 PAS domain DSUI_RS02750 PF08447 PAS fold DSUI_RS02750 PF00563 EAL domain DSUI_RS02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS02785 PF01012 Electron transfer flavoprotein domain DSUI_RS02785 PF00766 Electron transfer flavoprotein FAD-binding domain DSUI_RS02790 PF01012 Electron transfer flavoprotein domain DSUI_RS02795 PF03206 Nitrogen fixation protein NifW DSUI_RS02800 PF00682 HMGL-like DSUI_RS02810 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS02810 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS02815 PF00227 Proteasome subunit DSUI_RS02830 PF00005 ABC transporter DSUI_RS02835 PF01297 Zinc-uptake complex component A periplasmic DSUI_RS02850 PF07683 Cobalamin synthesis protein cobW C-terminal domain DSUI_RS02850 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSUI_RS02855 PF07683 Cobalamin synthesis protein cobW C-terminal domain DSUI_RS02855 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSUI_RS02865 PF00875 DNA photolyase DSUI_RS02865 PF03441 FAD binding domain of DNA photolyase DSUI_RS02875 PF02622 Uncharacterized ACR, COG1678 DSUI_RS02880 PF03652 Holliday junction resolvase DSUI_RS02885 PF00156 Phosphoribosyl transferase domain DSUI_RS02890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DSUI_RS02890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DSUI_RS02895 PF01979 Amidohydrolase family DSUI_RS02905 PF04397 LytTr DNA-binding domain DSUI_RS02910 PF02594 Uncharacterised ACR, YggU family COG1872 DSUI_RS02915 PF02325 YGGT family DSUI_RS02920 PF14748 Pyrroline-5-carboxylate reductase dimerisation DSUI_RS02920 PF03807 NADP oxidoreductase coenzyme F420-dependent DSUI_RS02925 PF01168 Alanine racemase, N-terminal domain DSUI_RS02930 PF00437 Type II/IV secretion system protein DSUI_RS02935 PF00437 Type II/IV secretion system protein DSUI_RS02940 PF01170 Putative RNA methylase family UPF0020 DSUI_RS02940 PF02926 THUMP domain DSUI_RS02945 PF03653 Uncharacterised protein family (UPF0093) DSUI_RS02955 PF00175 Oxidoreductase NAD-binding domain DSUI_RS02955 PF00111 2Fe-2S iron-sulfur cluster binding domain DSUI_RS02955 PF00970 Oxidoreductase FAD-binding domain DSUI_RS02960 PF08668 HDOD domain DSUI_RS02960 PF00563 EAL domain DSUI_RS02965 PF02378 Phosphotransferase system, EIIC DSUI_RS02990 PF02687 FtsX-like permease family DSUI_RS02990 PF12704 MacB-like periplasmic core domain DSUI_RS02990 PF00005 ABC transporter DSUI_RS03005 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS03005 PF07660 Secretin and TonB N terminus short domain DSUI_RS03005 PF00593 TonB dependent receptor DSUI_RS03015 PF08281 Sigma-70, region 4 DSUI_RS03015 PF04542 Sigma-70 region 2 DSUI_RS03035 PF01883 Iron-sulfur cluster assembly protein DSUI_RS03040 PF00005 ABC transporter DSUI_RS03045 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSUI_RS03045 PF00005 ABC transporter DSUI_RS03050 PF02653 Branched-chain amino acid transport system / permease component DSUI_RS03050 PF11862 Domain of unknown function (DUF3382) DSUI_RS03055 PF02653 Branched-chain amino acid transport system / permease component DSUI_RS03060 PF13458 Periplasmic binding protein DSUI_RS03065 PF00034 Cytochrome c DSUI_RS03070 PF03190 Protein of unknown function, DUF255 DSUI_RS03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS03075 PF03466 LysR substrate binding domain DSUI_RS03080 PF00892 EamA-like transporter family DSUI_RS03085 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSUI_RS03090 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS03100 PF00005 ABC transporter DSUI_RS03110 PF02219 Methylenetetrahydrofolate reductase DSUI_RS03120 PF05221 S-adenosyl-L-homocysteine hydrolase DSUI_RS03120 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DSUI_RS03125 PF01966 HD domain DSUI_RS03125 PF11871 Domain of unknown function (DUF3391) DSUI_RS03130 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS03130 PF00501 AMP-binding enzyme DSUI_RS03135 PF02773 S-adenosylmethionine synthetase, C-terminal domain DSUI_RS03135 PF02772 S-adenosylmethionine synthetase, central domain DSUI_RS03135 PF00438 S-adenosylmethionine synthetase, N-terminal domain DSUI_RS03145 PF03279 Bacterial lipid A biosynthesis acyltransferase DSUI_RS03155 PF01678 Diaminopimelate epimerase DSUI_RS03165 PF02899 Phage integrase, N-terminal SAM-like domain DSUI_RS03165 PF00589 Phage integrase family DSUI_RS03175 PF17785 PUA-like domain DSUI_RS03175 PF10672 S-adenosylmethionine-dependent methyltransferase DSUI_RS03185 PF09997 Predicted membrane protein (DUF2238) DSUI_RS03190 PF02895 Signal transducing histidine kinase, homodimeric domain DSUI_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS03190 PF01627 Hpt domain DSUI_RS03190 PF00072 Response regulator receiver domain DSUI_RS03190 PF01584 CheW-like domain DSUI_RS03195 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DSUI_RS03195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS03205 PF00072 Response regulator receiver domain DSUI_RS03210 PF00072 Response regulator receiver domain DSUI_RS03215 PF00301 Rubredoxin DSUI_RS03220 PF08543 Phosphomethylpyrimidine kinase DSUI_RS03225 PF02581 Thiamine monophosphate synthase DSUI_RS03230 PF00202 Aminotransferase class-III DSUI_RS03235 PF03976 Polyphosphate kinase 2 (PPK2) DSUI_RS03260 PF00491 Arginase family DSUI_RS03265 PF03109 ABC1 family DSUI_RS03270 PF00750 tRNA synthetases class I (R) DSUI_RS03270 PF05746 DALR anticodon binding domain DSUI_RS03270 PF03485 Arginyl tRNA synthetase N terminal domain DSUI_RS03280 PF13462 Thioredoxin DSUI_RS03285 PF00106 short chain dehydrogenase DSUI_RS03300 PF02630 SCO1/SenC DSUI_RS03310 PF01497 Periplasmic binding protein DSUI_RS03315 PF01812 5-formyltetrahydrofolate cyclo-ligase family DSUI_RS03320 PF01464 Transglycosylase SLT domain DSUI_RS03320 PF14718 Soluble lytic murein transglycosylase L domain DSUI_RS03330 PF13417 Glutathione S-transferase, N-terminal domain DSUI_RS03330 PF00043 Glutathione S-transferase, C-terminal domain DSUI_RS03335 PF01743 Poly A polymerase head domain DSUI_RS03335 PF01966 HD domain DSUI_RS03335 PF12627 Probable RNA and SrmB- binding site of polymerase A DSUI_RS03345 PF02798 Glutathione S-transferase, N-terminal domain DSUI_RS03345 PF00043 Glutathione S-transferase, C-terminal domain DSUI_RS03380 PF01171 PP-loop family DSUI_RS03385 PF16701 Adenylate cyclase regulatory domain DSUI_RS03385 PF00211 Adenylate and Guanylate cyclase catalytic domain DSUI_RS03390 PF03793 PASTA domain DSUI_RS03390 PF00069 Protein kinase domain DSUI_RS03410 PF02603 HPr Serine kinase N terminus DSUI_RS03410 PF07475 HPr Serine kinase C-terminal domain DSUI_RS03415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DSUI_RS03420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DSUI_RS03425 PF04963 Sigma-54 factor, core binding domain DSUI_RS03425 PF00309 Sigma-54 factor, Activator interacting domain (AID) DSUI_RS03425 PF04552 Sigma-54, DNA binding domain DSUI_RS03430 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSUI_RS03430 PF00005 ABC transporter DSUI_RS03435 PF02631 RecX family DSUI_RS03440 PF00154 recA bacterial DNA recombination protein DSUI_RS03450 PF00210 Ferritin-like domain DSUI_RS03455 PF02464 Competence-damaged protein DSUI_RS03460 PF04608 Phosphatidylglycerophosphatase A DSUI_RS03465 PF02769 AIR synthase related protein, C-terminal domain DSUI_RS03465 PF00586 AIR synthase related protein, N-terminal domain DSUI_RS03470 PF01029 NusB family DSUI_RS03475 PF00885 6,7-dimethyl-8-ribityllumazine synthase DSUI_RS03480 PF00925 GTP cyclohydrolase II DSUI_RS03480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DSUI_RS03485 PF00677 Lumazine binding domain DSUI_RS03490 PF00925 GTP cyclohydrolase II DSUI_RS03495 PF11412 Disulphide bond corrector protein DsbC DSUI_RS03495 PF02683 Cytochrome C biogenesis protein transmembrane region DSUI_RS03505 PF01061 ABC-2 type transporter DSUI_RS03520 PF00005 ABC transporter DSUI_RS03540 PF00585 C-terminal regulatory domain of Threonine dehydratase DSUI_RS03540 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS03575 PF09335 SNARE associated Golgi protein DSUI_RS03585 PF01894 Uncharacterised protein family UPF0047 DSUI_RS03590 PF07690 Major Facilitator Superfamily DSUI_RS03595 PF00561 alpha/beta hydrolase fold DSUI_RS03595 PF07021 Methionine biosynthesis protein MetW DSUI_RS03600 PF00561 alpha/beta hydrolase fold DSUI_RS03605 PF00391 PEP-utilising enzyme, mobile domain DSUI_RS03605 PF05524 PEP-utilising enzyme, N-terminal DSUI_RS03605 PF02896 PEP-utilising enzyme, TIM barrel domain DSUI_RS03610 PF00381 PTS HPr component phosphorylation site DSUI_RS03620 PF02424 ApbE family DSUI_RS03625 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DSUI_RS03625 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DSUI_RS03650 PF07669 Eco57I restriction-modification methylase DSUI_RS03650 PF12950 TaqI-like C-terminal specificity domain DSUI_RS03660 PF12848 ABC transporter DSUI_RS03660 PF00005 ABC transporter DSUI_RS03675 PF11871 Domain of unknown function (DUF3391) DSUI_RS03675 PF01966 HD domain DSUI_RS03680 PF12848 ABC transporter DSUI_RS03680 PF00005 ABC transporter DSUI_RS03690 PF00563 EAL domain DSUI_RS03690 PF08448 PAS fold DSUI_RS03690 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS03700 PF00551 Formyl transferase DSUI_RS03705 PF00909 Ammonium Transporter Family DSUI_RS03710 PF00543 Nitrogen regulatory protein P-II DSUI_RS03720 PF04380 Membrane fusogenic activity DSUI_RS03725 PF01078 Magnesium chelatase, subunit ChlI DSUI_RS03725 PF13335 Magnesium chelatase, subunit ChlI C-terminal DSUI_RS03730 PF00239 Resolvase, N terminal domain DSUI_RS03730 PF02796 Helix-turn-helix domain of resolvase DSUI_RS03735 PF01078 Magnesium chelatase, subunit ChlI DSUI_RS03735 PF13335 Magnesium chelatase, subunit ChlI C-terminal DSUI_RS03740 PF07690 Major Facilitator Superfamily DSUI_RS03745 PF00672 HAMP domain DSUI_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS03745 PF00072 Response regulator receiver domain DSUI_RS03745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS03745 PF01627 Hpt domain DSUI_RS03745 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS03750 PF00072 Response regulator receiver domain DSUI_RS03755 PF04355 SmpA / OmlA family DSUI_RS03760 PF02965 Vitamin B12 dependent methionine synthase, activation domain DSUI_RS03760 PF00809 Pterin binding enzyme DSUI_RS03760 PF02574 Homocysteine S-methyltransferase DSUI_RS03760 PF02310 B12 binding domain DSUI_RS03760 PF02607 B12 binding domain DSUI_RS03765 PF00106 short chain dehydrogenase DSUI_RS03770 PF00111 2Fe-2S iron-sulfur cluster binding domain DSUI_RS03770 PF00175 Oxidoreductase NAD-binding domain DSUI_RS03770 PF00970 Oxidoreductase FAD-binding domain DSUI_RS03775 PF01118 Semialdehyde dehydrogenase, NAD binding domain DSUI_RS03785 PF07075 Protein of unknown function (DUF1343) DSUI_RS03810 PF01590 GAF domain DSUI_RS03810 PF00360 Phytochrome region DSUI_RS03810 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS03810 PF00563 EAL domain DSUI_RS03815 PF01565 FAD binding domain DSUI_RS03815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DSUI_RS03850 PF00484 Carbonic anhydrase DSUI_RS03855 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DSUI_RS03855 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DSUI_RS03865 PF00480 ROK family DSUI_RS03870 PF03473 MOSC domain DSUI_RS03870 PF03475 3-alpha domain DSUI_RS03885 PF18074 Primosomal protein N C-terminal domain DSUI_RS03885 PF00270 DEAD/DEAH box helicase DSUI_RS03885 PF17764 3′ DNA-binding domain (3′BD) DSUI_RS03885 PF00271 Helicase conserved C-terminal domain DSUI_RS03885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DSUI_RS03890 PF01208 Uroporphyrinogen decarboxylase (URO-D) DSUI_RS03895 PF02386 Cation transport protein DSUI_RS03900 PF02254 TrkA-N domain DSUI_RS03900 PF02080 TrkA-C domain DSUI_RS03905 PF00072 Response regulator receiver domain DSUI_RS03905 PF02954 Bacterial regulatory protein, Fis family DSUI_RS03905 PF00158 Sigma-54 interaction domain DSUI_RS03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS03910 PF00672 HAMP domain DSUI_RS03920 PF01029 NusB family DSUI_RS03920 PF01189 16S rRNA methyltransferase RsmB/F DSUI_RS03925 PF16916 Dimerisation domain of Zinc Transporter DSUI_RS03925 PF01545 Cation efflux family DSUI_RS03935 PF01435 Peptidase family M48 DSUI_RS03940 PF02911 Formyl transferase, C-terminal domain DSUI_RS03940 PF00551 Formyl transferase DSUI_RS03945 PF01327 Polypeptide deformylase DSUI_RS03955 PF17782 DprA winged helix domain DSUI_RS03955 PF02481 DNA recombination-mediator protein A DSUI_RS03960 PF04361 Protein of unknown function (DUF494) DSUI_RS03965 PF01131 DNA topoisomerase DSUI_RS03965 PF01751 Toprim domain DSUI_RS03970 PF00210 Ferritin-like domain DSUI_RS03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS03975 PF03466 LysR substrate binding domain DSUI_RS03980 PF01479 S4 domain DSUI_RS03980 PF00849 RNA pseudouridylate synthase DSUI_RS03990 PF08534 Redoxin DSUI_RS03995 PF01757 Acyltransferase family DSUI_RS04005 PF01751 Toprim domain DSUI_RS04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS04005 PF18053 DNA gyrase B subunit insert domain DSUI_RS04005 PF00986 DNA gyrase B subunit, carboxyl terminus DSUI_RS04005 PF00204 DNA gyrase B DSUI_RS04010 PF02768 DNA polymerase III beta subunit, C-terminal domain DSUI_RS04010 PF02767 DNA polymerase III beta subunit, central domain DSUI_RS04010 PF00712 DNA polymerase III beta subunit, N-terminal domain DSUI_RS04015 PF08299 Bacterial dnaA protein helix-turn-helix DSUI_RS04015 PF11638 DnaA N-terminal domain DSUI_RS04015 PF00308 Bacterial dnaA protein DSUI_RS04020 PF00468 Ribosomal protein L34 DSUI_RS04025 PF00825 Ribonuclease P DSUI_RS04030 PF01809 Putative membrane protein insertion efficiency factor DSUI_RS04035 PF02096 60Kd inner membrane protein DSUI_RS04035 PF14849 YidC periplasmic domain DSUI_RS04040 PF10396 GTP-binding protein TrmE N-terminus DSUI_RS04040 PF01926 50S ribosome-binding GTPase DSUI_RS04040 PF12631 MnmE helical domain DSUI_RS04060 PF00005 ABC transporter DSUI_RS04065 PF00005 ABC transporter DSUI_RS04065 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSUI_RS04085 PF01134 Glucose inhibited division protein A DSUI_RS04085 PF13932 GidA associated domain DSUI_RS04090 PF02527 rRNA small subunit methyltransferase G DSUI_RS04095 PF13614 AAA domain DSUI_RS04100 PF17762 HTH domain found in ParB protein DSUI_RS04100 PF02195 ParB-like nuclease domain DSUI_RS04110 PF00119 ATP synthase A chain DSUI_RS04115 PF00137 ATP synthase subunit C DSUI_RS04120 PF00430 ATP synthase B/B' CF(0) DSUI_RS04125 PF00213 ATP synthase delta (OSCP) subunit DSUI_RS04130 PF02874 ATP synthase alpha/beta family, beta-barrel domain DSUI_RS04130 PF00306 ATP synthase alpha/beta chain, C terminal domain DSUI_RS04130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSUI_RS04135 PF00231 ATP synthase DSUI_RS04140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSUI_RS04140 PF02874 ATP synthase alpha/beta family, beta-barrel domain DSUI_RS04145 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DSUI_RS04145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DSUI_RS04160 PF01209 ubiE/COQ5 methyltransferase family DSUI_RS04170 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS04170 PF00072 Response regulator receiver domain DSUI_RS04175 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS04175 PF00989 PAS fold DSUI_RS04175 PF11808 Phosphate regulon sensor protein PhoR DSUI_RS04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS04190 PF01966 HD domain DSUI_RS04215 PF03372 Endonuclease/Exonuclease/phosphatase family DSUI_RS04220 PF00156 Phosphoribosyl transferase domain DSUI_RS04240 PF12801 4Fe-4S binding domain DSUI_RS04240 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DSUI_RS04240 PF13746 4Fe-4S dicluster domain DSUI_RS04265 PF18793 Nitrous oxide reductase propeller repeat 2 DSUI_RS04265 PF18764 Nitrous oxide reductase propeller repeat DSUI_RS04265 PF13473 Cupredoxin-like domain DSUI_RS04270 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS04270 PF00155 Aminotransferase class I and II DSUI_RS04275 PF02637 GatB domain DSUI_RS04275 PF02934 GatB/GatE catalytic domain DSUI_RS04285 PF01425 Amidase DSUI_RS04290 PF02686 Glu-tRNAGln amidotransferase C subunit DSUI_RS04300 PF04085 rod shape-determining protein MreC DSUI_RS04305 PF04093 rod shape-determining protein MreD DSUI_RS04310 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS04310 PF03717 Penicillin-binding Protein dimerisation domain DSUI_RS04315 PF01098 Cell cycle protein DSUI_RS04320 PF03330 Lytic transglycolase DSUI_RS04320 PF05036 Sporulation related domain DSUI_RS04325 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS04325 PF00563 EAL domain DSUI_RS04325 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS04330 PF00543 Nitrogen regulatory protein P-II DSUI_RS04335 PF00873 AcrB/AcrD/AcrF family DSUI_RS04340 PF00529 HlyD membrane-fusion protein of T1SS DSUI_RS04340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS04350 PF07943 Penicillin-binding protein 5, C-terminal domain DSUI_RS04350 PF00768 D-alanyl-D-alanine carboxypeptidase DSUI_RS04355 PF01063 Amino-transferase class IV DSUI_RS04360 PF04359 Protein of unknown function (DUF493) DSUI_RS04365 PF03099 Biotin/lipoate A/B protein ligase family DSUI_RS04370 PF04055 Radical SAM superfamily DSUI_RS04410 PF09299 Mu transposase, C-terminal DSUI_RS04410 PF00665 Integrase core domain DSUI_RS04420 PF00072 Response regulator receiver domain DSUI_RS04455 PF00206 Lyase DSUI_RS04455 PF10415 Fumarase C C-terminus DSUI_RS04460 PF00034 Cytochrome c DSUI_RS04465 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DSUI_RS04465 PF12801 4Fe-4S binding domain DSUI_RS04465 PF13746 4Fe-4S dicluster domain DSUI_RS04470 PF00753 Metallo-beta-lactamase superfamily DSUI_RS04475 PF00158 Sigma-54 interaction domain DSUI_RS04475 PF00072 Response regulator receiver domain DSUI_RS04475 PF02954 Bacterial regulatory protein, Fis family DSUI_RS04480 PF00578 AhpC/TSA family DSUI_RS04480 PF02683 Cytochrome C biogenesis protein transmembrane region DSUI_RS04480 PF17991 Thioredoxin like C-terminal domain DSUI_RS04490 PF13361 UvrD-like helicase C-terminal domain DSUI_RS04490 PF00580 UvrD/REP helicase N-terminal domain DSUI_RS04500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS04520 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS04520 PF00072 Response regulator receiver domain DSUI_RS04525 PF01590 GAF domain DSUI_RS04525 PF02954 Bacterial regulatory protein, Fis family DSUI_RS04525 PF00158 Sigma-54 interaction domain DSUI_RS04530 PF03960 ArsC family DSUI_RS04540 PF02579 Dinitrogenase iron-molybdenum cofactor DSUI_RS04540 PF04055 Radical SAM superfamily DSUI_RS04545 PF00037 4Fe-4S binding domain DSUI_RS04550 PF01521 Iron-sulphur cluster biosynthesis DSUI_RS04575 PF01575 MaoC like domain DSUI_RS04580 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DSUI_RS04585 PF04344 Chemotaxis phosphatase, CheZ DSUI_RS04590 PF03747 ADP-ribosylglycohydrolase DSUI_RS04595 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) DSUI_RS04600 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DSUI_RS04605 PF00148 Nitrogenase component 1 type Oxidoreductase DSUI_RS04610 PF11844 Domain of unknown function (DUF3364) DSUI_RS04610 PF00148 Nitrogenase component 1 type Oxidoreductase DSUI_RS04615 PF00111 2Fe-2S iron-sulfur cluster binding domain DSUI_RS04630 PF04545 Sigma-70, region 4 DSUI_RS04630 PF04542 Sigma-70 region 2 DSUI_RS04635 PF01136 Peptidase family U32 DSUI_RS04640 PF01136 Peptidase family U32 DSUI_RS04645 PF02036 SCP-2 sterol transfer family DSUI_RS04650 PF02308 MgtC family DSUI_RS04655 PF00672 HAMP domain DSUI_RS04655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS04665 PF04493 Endonuclease V DSUI_RS04675 PF00072 Response regulator receiver domain DSUI_RS04675 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS04680 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DSUI_RS04680 PF00561 alpha/beta hydrolase fold DSUI_RS04690 PF09278 MerR, DNA binding DSUI_RS04690 PF00376 MerR family regulatory protein DSUI_RS04700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSUI_RS04700 PF02770 Acyl-CoA dehydrogenase, middle domain DSUI_RS04700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSUI_RS04705 PF02803 Thiolase, C-terminal domain DSUI_RS04705 PF00108 Thiolase, N-terminal domain DSUI_RS04710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSUI_RS04710 PF02770 Acyl-CoA dehydrogenase, middle domain DSUI_RS04710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSUI_RS04715 PF01323 DSBA-like thioredoxin domain DSUI_RS04720 PF03641 Possible lysine decarboxylase DSUI_RS04725 PF01039 Carboxyl transferase domain DSUI_RS04730 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS04735 PF00364 Biotin-requiring enzyme DSUI_RS04735 PF00289 Biotin carboxylase, N-terminal domain DSUI_RS04735 PF02785 Biotin carboxylase C-terminal domain DSUI_RS04735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSUI_RS04740 PF08448 PAS fold DSUI_RS04740 PF00563 EAL domain DSUI_RS04740 PF08447 PAS fold DSUI_RS04740 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS04745 PF00682 HMGL-like DSUI_RS04760 PF00753 Metallo-beta-lactamase superfamily DSUI_RS04760 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSUI_RS04770 PF07687 Peptidase dimerisation domain DSUI_RS04770 PF01546 Peptidase family M20/M25/M40 DSUI_RS04775 PF03668 P-loop ATPase protein family DSUI_RS04790 PF02441 Flavoprotein DSUI_RS04810 PF17202 Single cache domain 3 DSUI_RS04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS04810 PF00672 HAMP domain DSUI_RS04815 PF10576 Iron-sulfur binding domain of endonuclease III DSUI_RS04815 PF00633 Helix-hairpin-helix motif DSUI_RS04815 PF14815 NUDIX domain DSUI_RS04815 PF00730 HhH-GPD superfamily base excision DNA repair protein DSUI_RS04820 PF17863 AAA lid domain DSUI_RS04820 PF07726 ATPase family associated with various cellular activities (AAA) DSUI_RS04840 PF01370 NAD dependent epimerase/dehydratase family DSUI_RS04840 PF02222 ATP-grasp domain DSUI_RS04845 PF01613 Flavin reductase like domain DSUI_RS04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS04855 PF03466 LysR substrate binding domain DSUI_RS04875 PF13458 Periplasmic binding protein DSUI_RS04890 PF05690 Thiazole biosynthesis protein ThiG DSUI_RS04890 PF02597 ThiS family DSUI_RS04895 PF05690 Thiazole biosynthesis protein ThiG DSUI_RS04905 PF02390 Putative methyltransferase DSUI_RS04930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS04935 PF18075 FtsX extracellular domain DSUI_RS04940 PF00005 ABC transporter DSUI_RS04945 PF00448 SRP54-type protein, GTPase domain DSUI_RS04945 PF02881 SRP54-type protein, helical bundle domain DSUI_RS04950 PF00675 Insulinase (Peptidase family M16) DSUI_RS04950 PF05193 Peptidase M16 inactive domain DSUI_RS04955 PF05193 Peptidase M16 inactive domain DSUI_RS04965 PF01467 Cytidylyltransferase-like DSUI_RS04970 PF00037 4Fe-4S binding domain DSUI_RS04975 PF00350 Dynamin family DSUI_RS04980 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DSUI_RS04980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DSUI_RS04980 PF06827 Zinc finger found in FPG and IleRS DSUI_RS04995 PF08544 GHMP kinases C terminal DSUI_RS04995 PF00288 GHMP kinases N terminal domain DSUI_RS05005 PF14572 Phosphoribosyl synthetase-associated domain DSUI_RS05005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DSUI_RS05010 PF14693 Ribosomal protein TL5, C-terminal domain DSUI_RS05010 PF01386 Ribosomal L25p family DSUI_RS05015 PF01195 Peptidyl-tRNA hydrolase DSUI_RS05020 PF06071 Protein of unknown function (DUF933) DSUI_RS05020 PF01926 50S ribosome-binding GTPase DSUI_RS05025 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSUI_RS05030 PF13091 PLD-like domain DSUI_RS05035 PF03372 Endonuclease/Exonuclease/phosphatase family DSUI_RS05040 PF02445 Quinolinate synthetase A protein DSUI_RS05065 PF00120 Glutamine synthetase, catalytic domain DSUI_RS05065 PF03951 Glutamine synthetase, beta-Grasp domain DSUI_RS05075 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS05075 PF00989 PAS fold DSUI_RS05080 PF00158 Sigma-54 interaction domain DSUI_RS05080 PF00072 Response regulator receiver domain DSUI_RS05080 PF02954 Bacterial regulatory protein, Fis family DSUI_RS05085 PF03099 Biotin/lipoate A/B protein ligase family DSUI_RS05085 PF02237 Biotin protein ligase C terminal domain DSUI_RS05090 PF03309 Type III pantothenate kinase DSUI_RS05095 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS05105 PF01121 Dephospho-CoA kinase DSUI_RS05110 PF07072 Cell division protein DSUI_RS05115 PF03884 DNA gyrase inhibitor YacG DSUI_RS05120 PF02581 Thiamine monophosphate synthase DSUI_RS05130 PF06725 3D domain DSUI_RS05130 PF03562 MltA specific insert domain DSUI_RS05135 PF00909 Ammonium Transporter Family DSUI_RS05145 PF00403 Heavy-metal-associated domain DSUI_RS05155 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS05155 PF00072 Response regulator receiver domain DSUI_RS05180 PF13533 Biotin-lipoyl like DSUI_RS05185 PF00873 AcrB/AcrD/AcrF family DSUI_RS05195 PF04945 YHS domain DSUI_RS05215 PF11525 Copper resistance protein K DSUI_RS05240 PF08722 TnsA endonuclease N terminal DSUI_RS05240 PF08721 TnsA endonuclease C terminal DSUI_RS05260 PF00672 HAMP domain DSUI_RS05260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS05260 PF17200 Single Cache domain 2 DSUI_RS05265 PF13098 Thioredoxin-like domain DSUI_RS05265 PF10411 Disulfide bond isomerase protein N-terminus DSUI_RS05270 PF01494 FAD binding domain DSUI_RS05280 PF01202 Shikimate kinase DSUI_RS05285 PF01761 3-dehydroquinate synthase DSUI_RS05290 PF04898 Glutamate synthase central domain DSUI_RS05290 PF01493 GXGXG motif DSUI_RS05290 PF00310 Glutamine amidotransferases class-II DSUI_RS05290 PF01645 Conserved region in glutamate synthase DSUI_RS05295 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS05295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DSUI_RS05305 PF12804 MobA-like NTP transferase domain DSUI_RS05305 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS05315 PF01380 SIS domain DSUI_RS05325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DSUI_RS05325 PF12833 Helix-turn-helix domain DSUI_RS05335 PF02310 B12 binding domain DSUI_RS05335 PF01642 Methylmalonyl-CoA mutase DSUI_RS05340 PF00881 Nitroreductase family DSUI_RS05350 PF00501 AMP-binding enzyme DSUI_RS05355 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSUI_RS05355 PF00005 ABC transporter DSUI_RS05360 PF02653 Branched-chain amino acid transport system / permease component DSUI_RS05375 PF00005 ABC transporter DSUI_RS05380 PF14535 AMP-binding enzyme C-terminal domain DSUI_RS05380 PF00501 AMP-binding enzyme DSUI_RS05385 PF02515 CoA-transferase family III DSUI_RS05390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS05390 PF00672 HAMP domain DSUI_RS05390 PF12729 Four helix bundle sensory module for signal transduction DSUI_RS05395 PF01814 Hemerythrin HHE cation binding domain DSUI_RS05405 PF00255 Glutathione peroxidase DSUI_RS05410 PF02630 SCO1/SenC DSUI_RS05415 PF00140 Sigma-70 factor, region 1.2 DSUI_RS05415 PF04542 Sigma-70 region 2 DSUI_RS05415 PF04545 Sigma-70, region 4 DSUI_RS05420 PF00920 Dehydratase family DSUI_RS05425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS05425 PF00672 HAMP domain DSUI_RS05430 PF01790 Prolipoprotein diacylglyceryl transferase DSUI_RS05445 PF00589 Phage integrase family DSUI_RS05450 PF02321 Outer membrane efflux protein DSUI_RS05460 PF00873 AcrB/AcrD/AcrF family DSUI_RS05475 PF07690 Major Facilitator Superfamily DSUI_RS05480 PF00460 Flagella basal body rod protein DSUI_RS05485 PF09828 Chromate resistance exported protein DSUI_RS05500 PF09828 Chromate resistance exported protein DSUI_RS05540 PF00589 Phage integrase family DSUI_RS05540 PF02899 Phage integrase, N-terminal SAM-like domain DSUI_RS05545 PF03824 High-affinity nickel-transport protein DSUI_RS05550 PF08448 PAS fold DSUI_RS05550 PF08447 PAS fold DSUI_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS05555 PF01402 Ribbon-helix-helix protein, copG family DSUI_RS05555 PF08753 NikR C terminal nickel binding domain DSUI_RS05560 PF01435 Peptidase family M48 DSUI_RS05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS05570 PF03466 LysR substrate binding domain DSUI_RS05575 PF00374 Nickel-dependent hydrogenase DSUI_RS05580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSUI_RS05580 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DSUI_RS05585 PF00158 Sigma-54 interaction domain DSUI_RS05585 PF00072 Response regulator receiver domain DSUI_RS05585 PF02954 Bacterial regulatory protein, Fis family DSUI_RS05590 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS05590 PF00551 Formyl transferase DSUI_RS05590 PF02911 Formyl transferase, C-terminal domain DSUI_RS05595 PF02535 ZIP Zinc transporter DSUI_RS05600 PF02769 AIR synthase related protein, C-terminal domain DSUI_RS05600 PF00586 AIR synthase related protein, N-terminal domain DSUI_RS05605 PF01924 Hydrogenase formation hypA family DSUI_RS05610 PF01455 HupF/HypC family DSUI_RS05620 PF00708 Acylphosphatase DSUI_RS05620 PF17788 HypF Kae1-like domain DSUI_RS05620 PF01300 Telomere recombination DSUI_RS05620 PF07503 HypF finger DSUI_RS05625 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSUI_RS05635 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DSUI_RS05640 PF00374 Nickel-dependent hydrogenase DSUI_RS05645 PF00034 Cytochrome c DSUI_RS05645 PF03150 Di-haem cytochrome c peroxidase DSUI_RS05650 PF00005 ABC transporter DSUI_RS05655 PF03379 CcmB protein DSUI_RS05660 PF01578 Cytochrome C assembly protein DSUI_RS05665 PF04995 Heme exporter protein D (CcmD) DSUI_RS05670 PF03100 CcmE DSUI_RS05675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DSUI_RS05675 PF01578 Cytochrome C assembly protein DSUI_RS05680 PF08534 Redoxin DSUI_RS05685 PF03918 Cytochrome C biogenesis protein DSUI_RS05695 PF03264 NapC/NirT cytochrome c family, N-terminal region DSUI_RS05700 PF09459 Ethylbenzene dehydrogenase DSUI_RS05710 PF01479 S4 domain DSUI_RS05715 PF02954 Bacterial regulatory protein, Fis family DSUI_RS05715 PF00072 Response regulator receiver domain DSUI_RS05720 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS05725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DSUI_RS05725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DSUI_RS05730 PF01491 Frataxin-like domain DSUI_RS05735 PF02635 DsrE/DsrF-like family DSUI_RS05740 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS05740 PF00912 Transglycosylase DSUI_RS05740 PF17092 Penicillin-binding protein OB-like domain DSUI_RS05745 PF11104 Type IV pilus assembly protein PilM; DSUI_RS05750 PF05137 Fimbrial assembly protein (PilN) DSUI_RS05765 PF11741 AMIN domain DSUI_RS05765 PF00263 Bacterial type II and III secretion system protein DSUI_RS05765 PF03958 Bacterial type II/III secretion system short domain DSUI_RS05765 PF07660 Secretin and TonB N terminus short domain DSUI_RS05780 PF00919 Uncharacterized protein family UPF0004 DSUI_RS05780 PF01938 TRAM domain DSUI_RS05780 PF04055 Radical SAM superfamily DSUI_RS05785 PF02562 PhoH-like protein DSUI_RS05790 PF02130 Uncharacterized protein family UPF0054 DSUI_RS05795 PF03471 Transporter associated domain DSUI_RS05795 PF00571 CBS domain DSUI_RS05800 PF00795 Carbon-nitrogen hydrolase DSUI_RS05805 PF02091 Glycyl-tRNA synthetase alpha subunit DSUI_RS05810 PF05746 DALR anticodon binding domain DSUI_RS05810 PF02092 Glycyl-tRNA synthetase beta subunit DSUI_RS05830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSUI_RS05835 PF00072 Response regulator receiver domain DSUI_RS05855 PF00140 Sigma-70 factor, region 1.2 DSUI_RS05855 PF04542 Sigma-70 region 2 DSUI_RS05855 PF04539 Sigma-70 region 3 DSUI_RS05855 PF03979 Sigma-70 factor, region 1.1 DSUI_RS05855 PF04546 Sigma-70, non-essential region DSUI_RS05855 PF04545 Sigma-70, region 4 DSUI_RS05860 PF01807 CHC2 zinc finger DSUI_RS05860 PF08278 DNA primase DnaG DnaB-binding DSUI_RS05860 PF10410 DnaB-helicase binding domain of primase DSUI_RS05860 PF08275 DNA primase catalytic core, N-terminal domain DSUI_RS05870 PF01165 Ribosomal protein S21 DSUI_RS05875 PF00814 Glycoprotease family DSUI_RS05880 PF02660 Glycerol-3-phosphate acyltransferase DSUI_RS05890 PF04073 Aminoacyl-tRNA editing domain DSUI_RS05895 PF02899 Phage integrase, N-terminal SAM-like domain DSUI_RS05895 PF00589 Phage integrase family DSUI_RS05900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DSUI_RS05900 PF12833 Helix-turn-helix domain DSUI_RS05900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DSUI_RS05900 PF02805 Metal binding domain of Ada DSUI_RS05910 PF00171 Aldehyde dehydrogenase family DSUI_RS05920 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DSUI_RS05920 PF06144 DNA polymerase III, delta subunit DSUI_RS05930 PF08264 Anticodon-binding domain of tRNA DSUI_RS05930 PF00133 tRNA synthetases class I (I, L, M and V) DSUI_RS05930 PF13603 Leucyl-tRNA synthetase, Domain 2 DSUI_RS05930 PF09334 tRNA synthetases class I (M) DSUI_RS05945 PF00580 UvrD/REP helicase N-terminal domain DSUI_RS05945 PF13361 UvrD-like helicase C-terminal domain DSUI_RS05950 PF00072 Response regulator receiver domain DSUI_RS05955 PF08240 Alcohol dehydrogenase GroES-like domain DSUI_RS05955 PF00107 Zinc-binding dehydrogenase DSUI_RS05970 PF03480 Bacterial extracellular solute-binding protein, family 7 DSUI_RS05975 PF03480 Bacterial extracellular solute-binding protein, family 7 DSUI_RS05980 PF01523 Putative modulator of DNA gyrase DSUI_RS05985 PF04751 Protein of unknown function (DUF615) DSUI_RS05990 PF00994 Probable molybdopterin binding domain DSUI_RS06000 PF00303 Thymidylate synthase DSUI_RS06005 PF00342 Phosphoglucose isomerase DSUI_RS06010 PF00186 Dihydrofolate reductase DSUI_RS06035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DSUI_RS06035 PF01276 Orn/Lys/Arg decarboxylase, major domain DSUI_RS06035 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DSUI_RS06040 PF00692 dUTPase DSUI_RS06045 PF10609 NUBPL iron-transfer P-loop NTPase DSUI_RS06050 PF09334 tRNA synthetases class I (M) DSUI_RS06050 PF08264 Anticodon-binding domain of tRNA DSUI_RS06050 PF01588 Putative tRNA binding domain DSUI_RS06060 PF00916 Sulfate permease family DSUI_RS06060 PF01740 STAS domain DSUI_RS06065 PF00708 Acylphosphatase DSUI_RS06075 PF10417 C-terminal domain of 1-Cys peroxiredoxin DSUI_RS06075 PF00578 AhpC/TSA family DSUI_RS06080 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS06080 PF00593 TonB dependent receptor DSUI_RS06095 PF01336 OB-fold nucleic acid binding domain DSUI_RS06095 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSUI_RS06095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSUI_RS06095 PF02811 PHP domain DSUI_RS06095 PF14579 Helix-hairpin-helix motif DSUI_RS06100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS06100 PF03466 LysR substrate binding domain DSUI_RS06105 PF02678 Pirin DSUI_RS06105 PF17954 Quercetinase C-terminal cupin domain DSUI_RS06110 PF03358 NADPH-dependent FMN reductase DSUI_RS06115 PF00072 Response regulator receiver domain DSUI_RS06120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSUI_RS06130 PF00300 Histidine phosphatase superfamily (branch 1) DSUI_RS06135 PF00464 Serine hydroxymethyltransferase DSUI_RS06140 PF03477 ATP cone domain DSUI_RS06145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DSUI_RS06145 PF01872 RibD C-terminal domain DSUI_RS06150 PF00899 ThiF family DSUI_RS06160 PF03572 Peptidase family S41 DSUI_RS06160 PF13180 PDZ domain DSUI_RS06165 PF01551 Peptidase family M23 DSUI_RS06175 PF00581 Rhodanese-like domain DSUI_RS06180 PF00462 Glutaredoxin DSUI_RS06185 PF02556 Preprotein translocase subunit SecB DSUI_RS06195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DSUI_RS06195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DSUI_RS06200 PF00588 SpoU rRNA Methylase family DSUI_RS06205 PF00437 Type II/IV secretion system protein DSUI_RS06205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSUI_RS06210 PF00482 Type II secretion system (T2SS), protein F DSUI_RS06220 PF07963 Prokaryotic N-terminal methylation motif DSUI_RS06225 PF07963 Prokaryotic N-terminal methylation motif DSUI_RS06280 PF00263 Bacterial type II and III secretion system protein DSUI_RS06280 PF03958 Bacterial type II/III secretion system short domain DSUI_RS06285 PF01471 Putative peptidoglycan binding domain DSUI_RS06285 PF13401 AAA domain DSUI_RS06300 PF04932 O-Antigen ligase DSUI_RS06300 PF11846 Virulence factor membrane-bound polymerase, C-terminal DSUI_RS06300 PF15864 Protein glycosylation ligase DSUI_RS06310 PF04055 Radical SAM superfamily DSUI_RS06310 PF06968 Biotin and Thiamin Synthesis associated domain DSUI_RS06315 PF08241 Methyltransferase domain DSUI_RS06320 PF01794 Ferric reductase like transmembrane component DSUI_RS06325 PF00174 Oxidoreductase molybdopterin binding domain DSUI_RS06335 PF08281 Sigma-70, region 4 DSUI_RS06335 PF04542 Sigma-70 region 2 DSUI_RS06345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS06350 PF01926 50S ribosome-binding GTPase DSUI_RS06355 PF00490 Delta-aminolevulinic acid dehydratase DSUI_RS06360 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS06370 PF00696 Amino acid kinase family DSUI_RS06375 PF00011 Hsp20/alpha crystallin family DSUI_RS06385 PF00293 NUDIX domain DSUI_RS06395 PF00545 ribonuclease DSUI_RS06400 PF00152 tRNA synthetases class II (D, K and N) DSUI_RS06400 PF01336 OB-fold nucleic acid binding domain DSUI_RS06400 PF02938 GAD domain DSUI_RS06415 PF06750 Bacterial Peptidase A24 N-terminal domain DSUI_RS06415 PF01478 Type IV leader peptidase family DSUI_RS06420 PF00482 Type II secretion system (T2SS), protein F DSUI_RS06425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSUI_RS06425 PF00437 Type II/IV secretion system protein DSUI_RS06430 PF01578 Cytochrome C assembly protein DSUI_RS06435 PF02881 SRP54-type protein, helical bundle domain DSUI_RS06435 PF02978 Signal peptide binding domain DSUI_RS06435 PF00448 SRP54-type protein, GTPase domain DSUI_RS06440 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DSUI_RS06440 PF01464 Transglycosylase SLT domain DSUI_RS06445 PF04073 Aminoacyl-tRNA editing domain DSUI_RS06445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSUI_RS06445 PF03129 Anticodon binding domain DSUI_RS06450 PF00293 NUDIX domain DSUI_RS06465 PF03232 Ubiquinone biosynthesis protein COQ7 DSUI_RS06470 PF02566 OsmC-like protein DSUI_RS06475 PF00572 Ribosomal protein L13 DSUI_RS06480 PF00380 Ribosomal protein S9/S16 DSUI_RS06490 PF01521 Iron-sulphur cluster biosynthesis DSUI_RS06495 PF01551 Peptidase family M23 DSUI_RS06495 PF01476 LysM domain DSUI_RS06525 PF01625 Peptide methionine sulfoxide reductase DSUI_RS06530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSUI_RS06535 PF00561 alpha/beta hydrolase fold DSUI_RS06540 PF00753 Metallo-beta-lactamase superfamily DSUI_RS06545 PF01544 CorA-like Mg2+ transporter protein DSUI_RS06550 PF00899 ThiF family DSUI_RS06560 PF01814 Hemerythrin HHE cation binding domain DSUI_RS06575 PF00270 DEAD/DEAH box helicase DSUI_RS06575 PF12343 Cold shock protein DEAD box A DSUI_RS06575 PF00271 Helicase conserved C-terminal domain DSUI_RS06575 PF03880 DbpA RNA binding domain DSUI_RS06580 PF01575 MaoC like domain DSUI_RS06590 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS06590 PF00155 Aminotransferase class I and II DSUI_RS06605 PF01476 LysM domain DSUI_RS06605 PF08525 Opacity-associated protein A N-terminal motif DSUI_RS06605 PF01551 Peptidase family M23 DSUI_RS06610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DSUI_RS06620 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS06620 PF05231 MASE1 DSUI_RS06620 PF08447 PAS fold DSUI_RS06620 PF13426 PAS domain DSUI_RS06620 PF00563 EAL domain DSUI_RS06620 PF08448 PAS fold DSUI_RS06625 PF09345 Domain of unknown function (DUF1987) DSUI_RS06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DSUI_RS06635 PF00672 HAMP domain DSUI_RS06635 PF07730 Histidine kinase DSUI_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS06645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DSUI_RS06645 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSUI_RS06650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DSUI_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS06670 PF03466 LysR substrate binding domain DSUI_RS06675 PF00672 HAMP domain DSUI_RS06675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS06675 PF17200 Single Cache domain 2 DSUI_RS06680 PF11898 Domain of unknown function (DUF3418) DSUI_RS06680 PF04408 Helicase associated domain (HA2) DSUI_RS06680 PF00270 DEAD/DEAH box helicase DSUI_RS06680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DSUI_RS06680 PF00271 Helicase conserved C-terminal domain DSUI_RS06695 PF09361 Phasin protein DSUI_RS06705 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS06710 PF03968 OstA-like protein DSUI_RS06725 PF00571 CBS domain DSUI_RS06725 PF01380 SIS domain DSUI_RS06730 PF00999 Sodium/hydrogen exchanger family DSUI_RS06730 PF02080 TrkA-C domain DSUI_RS06730 PF02254 TrkA-N domain DSUI_RS06745 PF00211 Adenylate and Guanylate cyclase catalytic domain DSUI_RS06780 PF00482 Type II secretion system (T2SS), protein F DSUI_RS06785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSUI_RS06785 PF00437 Type II/IV secretion system protein DSUI_RS06795 PF00263 Bacterial type II and III secretion system protein DSUI_RS06795 PF03958 Bacterial type II/III secretion system short domain DSUI_RS06800 PF01471 Putative peptidoglycan binding domain DSUI_RS06800 PF13401 AAA domain DSUI_RS06805 PF02954 Bacterial regulatory protein, Fis family DSUI_RS06805 PF00072 Response regulator receiver domain DSUI_RS06805 PF00158 Sigma-54 interaction domain DSUI_RS06810 PF00005 ABC transporter DSUI_RS06815 PF02405 Permease MlaE DSUI_RS06820 PF02470 MlaD protein DSUI_RS06825 PF04333 MlaA lipoprotein DSUI_RS06835 PF13466 STAS domain DSUI_RS06840 PF00005 ABC transporter DSUI_RS06845 PF01061 ABC-2 type transporter DSUI_RS06850 PF01722 BolA-like protein DSUI_RS06855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DSUI_RS06870 PF01634 ATP phosphoribosyltransferase DSUI_RS06875 PF00815 Histidinol dehydrogenase DSUI_RS06890 PF00155 Aminotransferase class I and II DSUI_RS06895 PF00475 Imidazoleglycerol-phosphate dehydratase DSUI_RS06900 PF00117 Glutamine amidotransferase class-I DSUI_RS06905 PF00977 Histidine biosynthesis protein DSUI_RS06910 PF00977 Histidine biosynthesis protein DSUI_RS06915 PF01502 Phosphoribosyl-AMP cyclohydrolase DSUI_RS06920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DSUI_RS06930 PF02416 mttA/Hcf106 family DSUI_RS06935 PF02416 mttA/Hcf106 family DSUI_RS06940 PF00902 Sec-independent protein translocase protein (TatC) DSUI_RS06945 PF13230 Glutamine amidotransferases class-II DSUI_RS06950 PF13180 PDZ domain DSUI_RS06950 PF17820 PDZ domain DSUI_RS06955 PF01784 NIF3 (NGG1p interacting factor 3) DSUI_RS06960 PF01557 Fumarylacetoacetate (FAA) hydrolase family DSUI_RS06965 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS06965 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS06965 PF00563 EAL domain DSUI_RS06970 PF00360 Phytochrome region DSUI_RS06970 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS06970 PF01590 GAF domain DSUI_RS06970 PF00563 EAL domain DSUI_RS06980 PF00072 Response regulator receiver domain DSUI_RS06980 PF01339 CheB methylesterase DSUI_RS06985 PF03975 CheD chemotactic sensory transduction DSUI_RS06990 PF03705 CheR methyltransferase, all-alpha domain DSUI_RS06990 PF01739 CheR methyltransferase, SAM binding domain DSUI_RS06995 PF01584 CheW-like domain DSUI_RS07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS07000 PF00672 HAMP domain DSUI_RS07000 PF02743 Cache domain DSUI_RS07005 PF01584 CheW-like domain DSUI_RS07005 PF02895 Signal transducing histidine kinase, homodimeric domain DSUI_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS07005 PF01627 Hpt domain DSUI_RS07015 PF00672 HAMP domain DSUI_RS07015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS07020 PF00072 Response regulator receiver domain DSUI_RS07025 PF14535 AMP-binding enzyme C-terminal domain DSUI_RS07025 PF00501 AMP-binding enzyme DSUI_RS07030 PF01554 MatE DSUI_RS07035 PF14535 AMP-binding enzyme C-terminal domain DSUI_RS07035 PF00501 AMP-binding enzyme DSUI_RS07045 PF00549 CoA-ligase DSUI_RS07045 PF08442 ATP-grasp domain DSUI_RS07050 PF00549 CoA-ligase DSUI_RS07050 PF02629 CoA binding domain DSUI_RS07055 PF03741 Integral membrane protein TerC family DSUI_RS07060 PF02423 Ornithine cyclodeaminase/mu-crystallin family DSUI_RS07065 PF00069 Protein kinase domain DSUI_RS07065 PF03793 PASTA domain DSUI_RS07075 PF00498 FHA domain DSUI_RS07080 PF00211 Adenylate and Guanylate cyclase catalytic domain DSUI_RS07090 PF00027 Cyclic nucleotide-binding domain DSUI_RS07090 PF07885 Ion channel DSUI_RS07095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSUI_RS07095 PF00437 Type II/IV secretion system protein DSUI_RS07105 PF00114 Pilin (bacterial filament) DSUI_RS07105 PF07963 Prokaryotic N-terminal methylation motif DSUI_RS07125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS07130 PF00005 ABC transporter DSUI_RS07135 PF00158 Sigma-54 interaction domain DSUI_RS07135 PF02954 Bacterial regulatory protein, Fis family DSUI_RS07135 PF01590 GAF domain DSUI_RS07140 PF00171 Aldehyde dehydrogenase family DSUI_RS07145 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DSUI_RS07155 PF00005 ABC transporter DSUI_RS07155 PF02687 FtsX-like permease family DSUI_RS07155 PF12704 MacB-like periplasmic core domain DSUI_RS07165 PF02261 Aspartate decarboxylase DSUI_RS07170 PF02569 Pantoate-beta-alanine ligase DSUI_RS07175 PF02548 Ketopantoate hydroxymethyltransferase DSUI_RS07180 PF02223 Thymidylate kinase DSUI_RS07185 PF00672 HAMP domain DSUI_RS07185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS07185 PF16591 Helical bimodular sensor domain DSUI_RS07260 PF12728 Helix-turn-helix domain DSUI_RS07265 PF00011 Hsp20/alpha crystallin family DSUI_RS07270 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS07270 PF02861 Clp amino terminal domain, pathogenicity island component DSUI_RS07270 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS07270 PF17871 AAA lid domain DSUI_RS07270 PF10431 C-terminal, D2-small domain, of ClpB protein DSUI_RS07275 PF13091 PLD-like domain DSUI_RS07275 PF13396 Phospholipase_D-nuclease N-terminal DSUI_RS07280 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS07280 PF01434 Peptidase family M41 DSUI_RS07280 PF17862 AAA+ lid domain DSUI_RS07310 PF00085 Thioredoxin DSUI_RS07315 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS07315 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS07315 PF00563 EAL domain DSUI_RS07325 PF01435 Peptidase family M48 DSUI_RS07330 PF00595 PDZ domain DSUI_RS07345 PF00665 Integrase core domain DSUI_RS07350 PF01695 IstB-like ATP binding protein DSUI_RS07360 PF00665 Integrase core domain DSUI_RS07360 PF13936 Helix-turn-helix domain DSUI_RS07370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DSUI_RS07375 PF01743 Poly A polymerase head domain DSUI_RS07375 PF12626 Polymerase A arginine-rich C-terminus DSUI_RS07375 PF12627 Probable RNA and SrmB- binding site of polymerase A DSUI_RS07385 PF00308 Bacterial dnaA protein DSUI_RS07390 PF01594 AI-2E family transporter DSUI_RS07395 PF02769 AIR synthase related protein, C-terminal domain DSUI_RS07395 PF00586 AIR synthase related protein, N-terminal domain DSUI_RS07400 PF00034 Cytochrome c DSUI_RS07415 PF07690 Major Facilitator Superfamily DSUI_RS07440 PF00672 HAMP domain DSUI_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS07440 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS07445 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS07445 PF00072 Response regulator receiver domain DSUI_RS07455 PF00563 EAL domain DSUI_RS07455 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS07455 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS07465 PF02600 Disulfide bond formation protein DsbB DSUI_RS07470 PF00471 Ribosomal protein L33 DSUI_RS07475 PF00830 Ribosomal L28 family DSUI_RS07485 PF04002 RadC-like JAB domain DSUI_RS07490 PF02441 Flavoprotein DSUI_RS07490 PF04127 DNA / pantothenate metabolism flavoprotein DSUI_RS07495 PF00692 dUTPase DSUI_RS07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS07500 PF10518 TAT (twin-arginine translocation) pathway signal sequence DSUI_RS07500 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DSUI_RS07510 PF12794 Mechanosensitive ion channel inner membrane domain 1 DSUI_RS07510 PF12795 Mechanosensitive ion channel porin domain DSUI_RS07510 PF00924 Mechanosensitive ion channel DSUI_RS07515 PF01029 NusB family DSUI_RS07515 PF01189 16S rRNA methyltransferase RsmB/F DSUI_RS07525 PF00551 Formyl transferase DSUI_RS07535 PF09335 SNARE associated Golgi protein DSUI_RS07540 PF00072 Response regulator receiver domain DSUI_RS07550 PF08448 PAS fold DSUI_RS07550 PF08447 PAS fold DSUI_RS07550 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS07550 PF00563 EAL domain DSUI_RS07555 PF08676 MutL C terminal dimerisation domain DSUI_RS07555 PF01119 DNA mismatch repair protein, C-terminal domain DSUI_RS07570 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS07570 PF01627 Hpt domain DSUI_RS07570 PF00072 Response regulator receiver domain DSUI_RS07570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS07570 PF00672 HAMP domain DSUI_RS07575 PF00873 AcrB/AcrD/AcrF family DSUI_RS07580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS07585 PF00162 Phosphoglycerate kinase DSUI_RS07590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DSUI_RS07590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DSUI_RS07600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DSUI_RS07600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DSUI_RS07605 PF02780 Transketolase, C-terminal domain DSUI_RS07605 PF00456 Transketolase, thiamine diphosphate binding domain DSUI_RS07605 PF02779 Transketolase, pyrimidine binding domain DSUI_RS07610 PF00485 Phosphoribulokinase / Uridine kinase family DSUI_RS07615 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DSUI_RS07625 PF00563 EAL domain DSUI_RS07625 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS07625 PF08448 PAS fold DSUI_RS07630 PF00459 Inositol monophosphatase family DSUI_RS07640 PF04452 RNA methyltransferase DSUI_RS07645 PF03976 Polyphosphate kinase 2 (PPK2) DSUI_RS07650 PF00696 Amino acid kinase family DSUI_RS07650 PF00583 Acetyltransferase (GNAT) family DSUI_RS07655 PF04362 Bacterial Fe(2+) trafficking DSUI_RS07665 PF01895 PhoU domain DSUI_RS07670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DSUI_RS07680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSUI_RS07680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS07685 PF02817 e3 binding domain DSUI_RS07685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DSUI_RS07685 PF00364 Biotin-requiring enzyme DSUI_RS07690 PF00456 Transketolase, thiamine diphosphate binding domain DSUI_RS07690 PF17831 Pyruvate dehydrogenase E1 component middle domain DSUI_RS07700 PF00989 PAS fold DSUI_RS07700 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS07705 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS07705 PF00072 Response regulator receiver domain DSUI_RS07710 PF02754 Cysteine-rich domain DSUI_RS07715 PF02589 LUD domain DSUI_RS07715 PF13183 4Fe-4S dicluster domain DSUI_RS07715 PF11870 Domain of unknown function (DUF3390) DSUI_RS07720 PF02589 LUD domain DSUI_RS07725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DSUI_RS07730 PF09312 SurA N-terminal domain DSUI_RS07730 PF00639 PPIC-type PPIASE domain DSUI_RS07735 PF04453 LPS transport system D DSUI_RS07740 PF01636 Phosphotransferase enzyme family DSUI_RS07745 PF00483 Nucleotidyl transferase DSUI_RS07755 PF00557 Metallopeptidase family M24 DSUI_RS07755 PF05195 Aminopeptidase P, N-terminal domain DSUI_RS07760 PF01494 FAD binding domain DSUI_RS07765 PF01207 Dihydrouridine synthase (Dus) DSUI_RS07770 PF02954 Bacterial regulatory protein, Fis family DSUI_RS07775 PF02142 MGS-like domain DSUI_RS07775 PF01808 AICARFT/IMPCHase bienzyme DSUI_RS07780 PF02844 Phosphoribosylglycinamide synthetase, N domain DSUI_RS07780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DSUI_RS07780 PF02843 Phosphoribosylglycinamide synthetase, C domain DSUI_RS07785 PF01218 Coproporphyrinogen III oxidase DSUI_RS07800 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DSUI_RS07805 PF02602 Uroporphyrinogen-III synthase HemD DSUI_RS07810 PF03900 Porphobilinogen deaminase, C-terminal domain DSUI_RS07810 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DSUI_RS07815 PF00311 Phosphoenolpyruvate carboxylase DSUI_RS07825 PF00501 AMP-binding enzyme DSUI_RS07825 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS07830 PF13180 PDZ domain DSUI_RS07885 PF00881 Nitroreductase family DSUI_RS07890 PF00072 Response regulator receiver domain DSUI_RS07890 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS07895 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS07895 PF08521 Two-component sensor kinase N-terminal DSUI_RS07900 PF08019 Phosphoethanolamine transferase EptA/EptB DSUI_RS07900 PF00884 Sulfatase DSUI_RS07910 PF01219 Prokaryotic diacylglycerol kinase DSUI_RS07915 PF17755 UvrA DNA-binding domain DSUI_RS07915 PF17760 UvrA interaction domain DSUI_RS07925 PF00106 short chain dehydrogenase DSUI_RS07930 PF00403 Heavy-metal-associated domain DSUI_RS07940 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSUI_RS07955 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DSUI_RS07955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS07960 PF13746 4Fe-4S dicluster domain DSUI_RS07960 PF12801 4Fe-4S binding domain DSUI_RS07960 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DSUI_RS07970 PF00582 Universal stress protein family DSUI_RS07975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DSUI_RS07975 PF10996 Beta-Casp domain DSUI_RS07975 PF00753 Metallo-beta-lactamase superfamily DSUI_RS07980 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DSUI_RS07980 PF00561 alpha/beta hydrolase fold DSUI_RS07985 PF03060 Nitronate monooxygenase DSUI_RS08025 PF01814 Hemerythrin HHE cation binding domain DSUI_RS08030 PF00027 Cyclic nucleotide-binding domain DSUI_RS08030 PF13545 Crp-like helix-turn-helix domain DSUI_RS08035 PF06969 HemN C-terminal domain DSUI_RS08035 PF04055 Radical SAM superfamily DSUI_RS08050 PF00403 Heavy-metal-associated domain DSUI_RS08065 PF07670 Nucleoside recognition DSUI_RS08065 PF04023 FeoA domain DSUI_RS08065 PF07664 Ferrous iron transport protein B C terminus DSUI_RS08065 PF17910 FeoB cytosolic helical domain DSUI_RS08065 PF02421 Ferrous iron transport protein B DSUI_RS08075 PF03239 Iron permease FTR1 family DSUI_RS08080 PF13473 Cupredoxin-like domain DSUI_RS08090 PF10634 Fe2+ transport protein DSUI_RS08100 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS08100 PF00593 TonB dependent receptor DSUI_RS08110 PF00667 FAD binding domain DSUI_RS08110 PF00258 Flavodoxin DSUI_RS08110 PF00175 Oxidoreductase NAD-binding domain DSUI_RS08130 PF18331 PKHD-type hydroxylase C-terminal domain DSUI_RS08130 PF13640 2OG-Fe(II) oxygenase superfamily DSUI_RS08135 PF00593 TonB dependent receptor DSUI_RS08135 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS08140 PF01070 FMN-dependent dehydrogenase DSUI_RS08145 PF13180 PDZ domain DSUI_RS08150 PF03150 Di-haem cytochrome c peroxidase DSUI_RS08150 PF00034 Cytochrome c DSUI_RS08155 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS08185 PF01479 S4 domain DSUI_RS08185 PF00163 Ribosomal protein S4/S9 N-terminal domain DSUI_RS08195 PF02514 CobN/Magnesium Chelatase DSUI_RS08195 PF11965 Domain of unknown function (DUF3479) DSUI_RS08200 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS08200 PF00593 TonB dependent receptor DSUI_RS08210 PF02472 Biopolymer transport protein ExbD/TolR DSUI_RS08215 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS08225 PF00719 Inorganic pyrophosphatase DSUI_RS08230 PF02540 NAD synthase DSUI_RS08230 PF00795 Carbon-nitrogen hydrolase DSUI_RS08235 PF00543 Nitrogen regulatory protein P-II DSUI_RS08245 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS08250 PF00027 Cyclic nucleotide-binding domain DSUI_RS08250 PF13545 Crp-like helix-turn-helix domain DSUI_RS08255 PF01580 FtsK/SpoIIIE family DSUI_RS08255 PF17854 FtsK alpha domain DSUI_RS08255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DSUI_RS08255 PF09397 Ftsk gamma domain DSUI_RS08260 PF03548 Outer membrane lipoprotein carrier protein LolA DSUI_RS08265 PF12002 MgsA AAA+ ATPase C terminal DSUI_RS08265 PF16193 AAA C-terminal domain DSUI_RS08265 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS08275 PF02403 Seryl-tRNA synthetase N-terminal domain DSUI_RS08275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSUI_RS08280 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSUI_RS08280 PF01464 Transglycosylase SLT domain DSUI_RS08290 PF00893 Small Multidrug Resistance protein DSUI_RS08315 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS08320 PF00691 OmpA family DSUI_RS08320 PF13677 Membrane MotB of proton-channel complex MotA/MotB DSUI_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS08325 PF00672 HAMP domain DSUI_RS08325 PF02743 Cache domain DSUI_RS08330 PF00072 Response regulator receiver domain DSUI_RS08335 PF01584 CheW-like domain DSUI_RS08335 PF02895 Signal transducing histidine kinase, homodimeric domain DSUI_RS08335 PF09078 CheY binding DSUI_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS08335 PF01627 Hpt domain DSUI_RS08340 PF01584 CheW-like domain DSUI_RS08345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS08345 PF08447 PAS fold DSUI_RS08345 PF08447 PAS fold DSUI_RS08345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS08350 PF03705 CheR methyltransferase, all-alpha domain DSUI_RS08350 PF01739 CheR methyltransferase, SAM binding domain DSUI_RS08355 PF03975 CheD chemotactic sensory transduction DSUI_RS08360 PF00072 Response regulator receiver domain DSUI_RS08360 PF01339 CheB methylesterase DSUI_RS08365 PF13466 STAS domain DSUI_RS08370 PF01966 HD domain DSUI_RS08370 PF00072 Response regulator receiver domain DSUI_RS08375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS08375 PF00672 HAMP domain DSUI_RS08380 PF00072 Response regulator receiver domain DSUI_RS08380 PF01584 CheW-like domain DSUI_RS08385 PF00072 Response regulator receiver domain DSUI_RS08385 PF01584 CheW-like domain DSUI_RS08390 PF00072 Response regulator receiver domain DSUI_RS08395 PF04344 Chemotaxis phosphatase, CheZ DSUI_RS08400 PF01627 Hpt domain DSUI_RS08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS08400 PF00072 Response regulator receiver domain DSUI_RS08400 PF01584 CheW-like domain DSUI_RS08400 PF02895 Signal transducing histidine kinase, homodimeric domain DSUI_RS08405 PF01312 FlhB HrpN YscU SpaS Family DSUI_RS08410 PF00771 FHIPEP family DSUI_RS08415 PF00448 SRP54-type protein, GTPase domain DSUI_RS08425 PF04542 Sigma-70 region 2 DSUI_RS08425 PF04545 Sigma-70, region 4 DSUI_RS08425 PF04539 Sigma-70 region 3 DSUI_RS08430 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS08435 PF00691 OmpA family DSUI_RS08435 PF13677 Membrane MotB of proton-channel complex MotA/MotB DSUI_RS08455 PF00460 Flagella basal body rod protein DSUI_RS08460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS08460 PF00460 Flagella basal body rod protein DSUI_RS08465 PF03963 Flagellar hook capping protein - N-terminal region DSUI_RS08465 PF13861 FlgD Tudor-like domain DSUI_RS08465 PF13860 FlgD Ig-like domain DSUI_RS08470 PF00460 Flagella basal body rod protein DSUI_RS08470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS08470 PF07559 Flagellar basal body protein FlaE DSUI_RS08475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS08475 PF00460 Flagella basal body rod protein DSUI_RS08480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS08480 PF00460 Flagella basal body rod protein DSUI_RS08485 PF02107 Flagellar L-ring protein DSUI_RS08490 PF02119 Flagellar P-ring protein DSUI_RS08495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DSUI_RS08495 PF10135 Rod binding protein DSUI_RS08500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS08500 PF00460 Flagella basal body rod protein DSUI_RS08505 PF00669 Bacterial flagellin N-terminal helical region DSUI_RS08515 PF01311 Bacterial export proteins, family 1 DSUI_RS08520 PF01313 Bacterial export proteins, family 3 DSUI_RS08525 PF00813 FliP family DSUI_RS08530 PF04347 Flagellar biosynthesis protein, FliO DSUI_RS08535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DSUI_RS08535 PF16973 Flagellar motor switch protein FliN N-terminal DSUI_RS08540 PF02154 Flagellar motor switch protein FliM DSUI_RS08540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DSUI_RS08560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSUI_RS08560 PF18269 T3SS EscN ATPase C-terminal domain DSUI_RS08570 PF01706 FliG C-terminal domain DSUI_RS08570 PF14842 FliG N-terminal domain DSUI_RS08570 PF14841 FliG middle domain DSUI_RS08575 PF08345 Flagellar M-ring protein C-terminal DSUI_RS08575 PF01514 Secretory protein of YscJ/FliF family DSUI_RS08580 PF00072 Response regulator receiver domain DSUI_RS08580 PF09456 RcsC Alpha-Beta-Loop (ABL) DSUI_RS08580 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS08585 PF00072 Response regulator receiver domain DSUI_RS08585 PF02954 Bacterial regulatory protein, Fis family DSUI_RS08585 PF00158 Sigma-54 interaction domain DSUI_RS08590 PF02049 Flagellar hook-basal body complex protein FliE DSUI_RS08615 PF00550 Phosphopantetheine attachment site DSUI_RS08640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DSUI_RS08655 PF00005 ABC transporter DSUI_RS08655 PF00664 ABC transporter transmembrane region DSUI_RS08660 PF00664 ABC transporter transmembrane region DSUI_RS08660 PF00005 ABC transporter DSUI_RS08665 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DSUI_RS08665 PF06594 Haemolysin-type calcium binding protein related domain DSUI_RS08670 PF00529 HlyD membrane-fusion protein of T1SS DSUI_RS08675 PF07317 Flagellar regulator YcgR DSUI_RS08675 PF07238 PilZ domain DSUI_RS08680 PF01312 FlhB HrpN YscU SpaS Family DSUI_RS08690 PF02561 Flagellar protein FliS DSUI_RS08695 PF07195 Flagellar hook-associated protein 2 C-terminus DSUI_RS08695 PF02465 Flagellar hook-associated protein 2 N-terminus DSUI_RS08695 PF07196 Flagellin hook IN motif DSUI_RS08705 PF07196 Flagellin hook IN motif DSUI_RS08705 PF00669 Bacterial flagellin N-terminal helical region DSUI_RS08705 PF00700 Bacterial flagellin C-terminal helical region DSUI_RS08710 PF00700 Bacterial flagellin C-terminal helical region DSUI_RS08710 PF00669 Bacterial flagellin N-terminal helical region DSUI_RS08710 PF07196 Flagellin hook IN motif DSUI_RS08725 PF00535 Glycosyl transferase family 2 DSUI_RS08735 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS08760 PF01695 IstB-like ATP binding protein DSUI_RS08775 PF09339 IclR helix-turn-helix domain DSUI_RS08775 PF01614 Bacterial transcriptional regulator DSUI_RS08815 PF12169 DNA polymerase III subunits gamma and tau domain III DSUI_RS08815 PF12170 DNA polymerase III tau subunit V interacting with alpha DSUI_RS08815 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DSUI_RS08820 PF02575 YbaB/EbfC DNA-binding family DSUI_RS08825 PF13662 Toprim domain DSUI_RS08825 PF02132 RecR protein DSUI_RS08830 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DSUI_RS08830 PF00355 Rieske [2Fe-2S] domain DSUI_RS08835 PF00033 Cytochrome b/b6/petB DSUI_RS08835 PF00032 Cytochrome b(C-terminal)/b6/petD DSUI_RS08840 PF02167 Cytochrome C1 family DSUI_RS08845 PF02798 Glutathione S-transferase, N-terminal domain DSUI_RS08845 PF00043 Glutathione S-transferase, C-terminal domain DSUI_RS08850 PF04386 Stringent starvation protein B DSUI_RS08855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSUI_RS08855 PF01568 Molydopterin dinucleotide binding domain DSUI_RS08855 PF00384 Molybdopterin oxidoreductase DSUI_RS08860 PF02885 Glycosyl transferase family, helical bundle domain DSUI_RS08865 PF01361 Tautomerase enzyme DSUI_RS08870 PF13458 Periplasmic binding protein DSUI_RS08875 PF07859 alpha/beta hydrolase fold DSUI_RS08885 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS08890 PF00563 EAL domain DSUI_RS08890 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS08890 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS08895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DSUI_RS08895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS08895 PF04324 BFD-like [2Fe-2S] binding domain DSUI_RS08895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DSUI_RS08895 PF18267 Rubredoxin NAD+ reductase C-terminal domain DSUI_RS08900 PF13806 Rieske-like [2Fe-2S] domain DSUI_RS08910 PF03861 ANTAR domain DSUI_RS08910 PF08376 Nitrate and nitrite sensing DSUI_RS08930 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS08935 PF00005 ABC transporter DSUI_RS08945 PF00534 Glycosyl transferases group 1 DSUI_RS08945 PF13439 Glycosyltransferase Family 4 DSUI_RS08950 PF00072 Response regulator receiver domain DSUI_RS08955 PF00893 Small Multidrug Resistance protein DSUI_RS08995 PF01384 Phosphate transporter family DSUI_RS09000 PF02253 Phospholipase A1 DSUI_RS09010 PF01758 Sodium Bile acid symporter family DSUI_RS09015 PF01451 Low molecular weight phosphotyrosine protein phosphatase DSUI_RS09025 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09025 PF00672 HAMP domain DSUI_RS09025 PF16527 Two-component sensor protein CpxA, periplasmic domain DSUI_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09030 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS09030 PF00072 Response regulator receiver domain DSUI_RS09050 PF01361 Tautomerase enzyme DSUI_RS09060 PF03466 LysR substrate binding domain DSUI_RS09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS09070 PF17200 Single Cache domain 2 DSUI_RS09070 PF00672 HAMP domain DSUI_RS09080 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS09080 PF00072 Response regulator receiver domain DSUI_RS09085 PF00072 Response regulator receiver domain DSUI_RS09095 PF01627 Hpt domain DSUI_RS09095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS09095 PF00672 HAMP domain DSUI_RS09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09095 PF00072 Response regulator receiver domain DSUI_RS09095 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09100 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS09100 PF00072 Response regulator receiver domain DSUI_RS09105 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09105 PF00672 HAMP domain DSUI_RS09105 PF01627 Hpt domain DSUI_RS09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS09105 PF00072 Response regulator receiver domain DSUI_RS09110 PF00072 Response regulator receiver domain DSUI_RS09120 PF02321 Outer membrane efflux protein DSUI_RS09125 PF00873 AcrB/AcrD/AcrF family DSUI_RS09130 PF00529 HlyD membrane-fusion protein of T1SS DSUI_RS09130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS09135 PF08361 MAATS-type transcriptional repressor, C-terminal region DSUI_RS09135 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS09140 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DSUI_RS09145 PF16925 Tetracyclin repressor-like, C-terminal domain DSUI_RS09145 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS09150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DSUI_RS09155 PF00892 EamA-like transporter family DSUI_RS09160 PF00296 Luciferase-like monooxygenase DSUI_RS09180 PF16326 ABC transporter C-terminal domain DSUI_RS09180 PF12848 ABC transporter DSUI_RS09180 PF00005 ABC transporter DSUI_RS09185 PF13426 PAS domain DSUI_RS09185 PF13188 PAS domain DSUI_RS09185 PF00989 PAS fold DSUI_RS09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09185 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09190 PF02954 Bacterial regulatory protein, Fis family DSUI_RS09190 PF00158 Sigma-54 interaction domain DSUI_RS09190 PF00072 Response regulator receiver domain DSUI_RS09195 PF00072 Response regulator receiver domain DSUI_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09200 PF00072 Response regulator receiver domain DSUI_RS09200 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09200 PF08448 PAS fold DSUI_RS09200 PF13188 PAS domain DSUI_RS09205 PF12072 Domain of unknown function (DUF3552) DSUI_RS09205 PF00013 KH domain DSUI_RS09205 PF01966 HD domain DSUI_RS09215 PF00563 EAL domain DSUI_RS09215 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS09215 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS09220 PF13378 Enolase C-terminal domain-like DSUI_RS09225 PF03466 LysR substrate binding domain DSUI_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09240 PF04011 LemA family DSUI_RS09245 PF07690 Major Facilitator Superfamily DSUI_RS09255 PF08032 RNA 2'-O ribose methyltransferase substrate binding DSUI_RS09255 PF00588 SpoU rRNA Methylase family DSUI_RS09265 PF10417 C-terminal domain of 1-Cys peroxiredoxin DSUI_RS09265 PF00578 AhpC/TSA family DSUI_RS09270 PF13192 Thioredoxin domain DSUI_RS09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS09275 PF00155 Aminotransferase class I and II DSUI_RS09285 PF04474 Protein of unknown function (DUF554) DSUI_RS09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09290 PF03466 LysR substrate binding domain DSUI_RS09295 PF04055 Radical SAM superfamily DSUI_RS09310 PF17762 HTH domain found in ParB protein DSUI_RS09310 PF02195 ParB-like nuclease domain DSUI_RS09315 PF00072 Response regulator receiver domain DSUI_RS09315 PF02954 Bacterial regulatory protein, Fis family DSUI_RS09320 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS09330 PF01654 Cytochrome bd terminal oxidase subunit I DSUI_RS09335 PF02322 Cytochrome bd terminal oxidase subunit II DSUI_RS09345 PF18381 YcaO cyclodehydratase C-terminal domain DSUI_RS09345 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DSUI_RS09350 PF11965 Domain of unknown function (DUF3479) DSUI_RS09350 PF02514 CobN/Magnesium Chelatase DSUI_RS09365 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS09365 PF00593 TonB dependent receptor DSUI_RS09370 PF00268 Ribonucleotide reductase, small chain DSUI_RS09375 PF02867 Ribonucleotide reductase, barrel domain DSUI_RS09375 PF03477 ATP cone domain DSUI_RS09375 PF00317 Ribonucleotide reductase, all-alpha domain DSUI_RS09380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSUI_RS09380 PF00205 Thiamine pyrophosphate enzyme, central domain DSUI_RS09380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSUI_RS09385 PF01842 ACT domain DSUI_RS09390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS09400 PF13404 AsnC-type helix-turn-helix domain DSUI_RS09400 PF17805 AsnC-like ligand binding domain DSUI_RS09405 PF17805 AsnC-like ligand binding domain DSUI_RS09405 PF13404 AsnC-type helix-turn-helix domain DSUI_RS09410 PF13404 AsnC-type helix-turn-helix domain DSUI_RS09410 PF17805 AsnC-like ligand binding domain DSUI_RS09415 PF13419 Haloacid dehalogenase-like hydrolase DSUI_RS09425 PF00691 OmpA family DSUI_RS09430 PF01979 Amidohydrolase family DSUI_RS09435 PF01389 OmpA-like transmembrane domain DSUI_RS09435 PF00691 OmpA family DSUI_RS09440 PF00521 DNA gyrase/topoisomerase IV, subunit A DSUI_RS09440 PF03989 DNA gyrase C-terminal domain, beta-propeller DSUI_RS09445 PF00266 Aminotransferase class-V DSUI_RS09450 PF00800 Prephenate dehydratase DSUI_RS09450 PF01817 Chorismate mutase type II DSUI_RS09450 PF01842 ACT domain DSUI_RS09460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DSUI_RS09465 PF00575 S1 RNA binding domain DSUI_RS09470 PF00216 Bacterial DNA-binding protein DSUI_RS09480 PF18073 Rubredoxin metal binding domain DSUI_RS09485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DSUI_RS09485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DSUI_RS09485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DSUI_RS09490 PF16363 GDP-mannose 4,6 dehydratase DSUI_RS09495 PF04321 RmlD substrate binding domain DSUI_RS09500 PF00483 Nucleotidyl transferase DSUI_RS09505 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DSUI_RS09510 PF00294 pfkB family carbohydrate kinase DSUI_RS09515 PF01370 NAD dependent epimerase/dehydratase family DSUI_RS09520 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS09540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSUI_RS09540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DSUI_RS09540 PF02824 TGS domain DSUI_RS09540 PF03129 Anticodon binding domain DSUI_RS09545 PF05198 Translation initiation factor IF-3, N-terminal domain DSUI_RS09545 PF00707 Translation initiation factor IF-3, C-terminal domain DSUI_RS09550 PF01632 Ribosomal protein L35 DSUI_RS09555 PF00453 Ribosomal protein L20 DSUI_RS09560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DSUI_RS09560 PF01409 tRNA synthetases class II core domain (F) DSUI_RS09565 PF03147 Ferredoxin-fold anticodon binding domain DSUI_RS09565 PF03484 tRNA synthetase B5 domain DSUI_RS09565 PF03483 B3/4 domain DSUI_RS09565 PF01588 Putative tRNA binding domain DSUI_RS09565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DSUI_RS09570 PF00216 Bacterial DNA-binding protein DSUI_RS09585 PF00816 H-NS histone family DSUI_RS09590 PF01975 Survival protein SurE DSUI_RS09600 PF01476 LysM domain DSUI_RS09600 PF01551 Peptidase family M23 DSUI_RS09605 PF04539 Sigma-70 region 3 DSUI_RS09605 PF04545 Sigma-70, region 4 DSUI_RS09605 PF00140 Sigma-70 factor, region 1.2 DSUI_RS09605 PF04542 Sigma-70 region 2 DSUI_RS09610 PF13406 Transglycosylase SLT domain DSUI_RS09615 PF11992 Domain of unknown function (DUF3488) DSUI_RS09615 PF13559 Domain of unknown function (DUF4129) DSUI_RS09615 PF01841 Transglutaminase-like superfamily DSUI_RS09625 PF17863 AAA lid domain DSUI_RS09625 PF07726 ATPase family associated with various cellular activities (AAA) DSUI_RS09630 PF00850 Histone deacetylase domain DSUI_RS09635 PF00701 Dihydrodipicolinate synthetase family DSUI_RS09640 PF06804 NlpB/DapX lipoprotein DSUI_RS09645 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSUI_RS09645 PF00753 Metallo-beta-lactamase superfamily DSUI_RS09660 PF05958 tRNA (Uracil-5-)-methyltransferase DSUI_RS09665 PF00009 Elongation factor Tu GTP binding domain DSUI_RS09670 PF01507 Phosphoadenosine phosphosulfate reductase family DSUI_RS09675 PF01507 Phosphoadenosine phosphosulfate reductase family DSUI_RS09690 PF01925 Sulfite exporter TauE/SafE DSUI_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09695 PF03466 LysR substrate binding domain DSUI_RS09700 PF01250 Ribosomal protein S6 DSUI_RS09705 PF01084 Ribosomal protein S18 DSUI_RS09710 PF01281 Ribosomal protein L9, N-terminal domain DSUI_RS09710 PF03948 Ribosomal protein L9, C-terminal domain DSUI_RS09715 PF03796 DnaB-like helicase C terminal domain DSUI_RS09715 PF00772 DnaB-like helicase N terminal domain DSUI_RS09730 PF02562 PhoH-like protein DSUI_RS09730 PF13638 PIN domain DSUI_RS09735 PF00578 AhpC/TSA family DSUI_RS09740 PF01177 Asp/Glu/Hydantoin racemase DSUI_RS09745 PF01042 Endoribonuclease L-PSP DSUI_RS09760 PF03350 Uncharacterized protein family, UPF0114 DSUI_RS09765 PF16177 Acetyl-coenzyme A synthetase N-terminus DSUI_RS09765 PF00501 AMP-binding enzyme DSUI_RS09765 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS09770 PF00478 IMP dehydrogenase / GMP reductase domain DSUI_RS09770 PF00571 CBS domain DSUI_RS09775 PF14480 DNA polymerase III polC-type N-terminus I DSUI_RS09775 PF02811 PHP domain DSUI_RS09775 PF14579 Helix-hairpin-helix motif DSUI_RS09775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSUI_RS09775 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSUI_RS09775 PF00929 Exonuclease DSUI_RS09775 PF11490 DNA polymerase III polC-type N-terminus II DSUI_RS09780 PF00474 Sodium:solute symporter family DSUI_RS09815 PF01695 IstB-like ATP binding protein DSUI_RS09820 PF00665 Integrase core domain DSUI_RS09825 PF00625 Guanylate kinase DSUI_RS09830 PF00665 Integrase core domain DSUI_RS09830 PF09299 Mu transposase, C-terminal DSUI_RS09840 PF03466 LysR substrate binding domain DSUI_RS09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09845 PF07859 alpha/beta hydrolase fold DSUI_RS09850 PF13533 Biotin-lipoyl like DSUI_RS09855 PF00873 AcrB/AcrD/AcrF family DSUI_RS09860 PF02321 Outer membrane efflux protein DSUI_RS09865 PF01541 GIY-YIG catalytic domain DSUI_RS09875 PF01063 Amino-transferase class IV DSUI_RS09885 PF00563 EAL domain DSUI_RS09885 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS09885 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09890 PF03466 LysR substrate binding domain DSUI_RS09895 PF06445 GyrI-like small molecule binding domain DSUI_RS09900 PF03466 LysR substrate binding domain DSUI_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS09920 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS09925 PF13380 CoA binding domain DSUI_RS09930 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS09935 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS09940 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS09945 PF00581 Rhodanese-like domain DSUI_RS09965 PF12848 ABC transporter DSUI_RS09965 PF00005 ABC transporter DSUI_RS09970 PF06472 ABC transporter transmembrane region 2 DSUI_RS09970 PF00005 ABC transporter DSUI_RS09985 PF01844 HNH endonuclease DSUI_RS10005 PF00005 ABC transporter DSUI_RS10010 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSUI_RS10010 PF00005 ABC transporter DSUI_RS10015 PF02653 Branched-chain amino acid transport system / permease component DSUI_RS10015 PF11862 Domain of unknown function (DUF3382) DSUI_RS10020 PF02653 Branched-chain amino acid transport system / permease component DSUI_RS10025 PF13458 Periplasmic binding protein DSUI_RS10030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSUI_RS10030 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DSUI_RS10035 PF00472 RF-1 domain DSUI_RS10040 PF03180 NLPA lipoprotein DSUI_RS10045 PF03079 ARD/ARD' family DSUI_RS10050 PF03180 NLPA lipoprotein DSUI_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS10060 PF09383 NIL domain DSUI_RS10060 PF00005 ABC transporter DSUI_RS10065 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS10065 PF00501 AMP-binding enzyme DSUI_RS10070 PF03466 LysR substrate binding domain DSUI_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS10075 PF02525 Flavodoxin-like fold DSUI_RS10080 PF05726 Pirin C-terminal cupin domain DSUI_RS10080 PF02678 Pirin DSUI_RS10095 PF11799 impB/mucB/samB family C-terminal domain DSUI_RS10095 PF00817 impB/mucB/samB family DSUI_RS10100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS10110 PF00034 Cytochrome c DSUI_RS10115 PF00989 PAS fold DSUI_RS10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS10115 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS10120 PF00072 Response regulator receiver domain DSUI_RS10120 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS10125 PF00155 Aminotransferase class I and II DSUI_RS10125 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS10130 PF02627 Carboxymuconolactone decarboxylase family DSUI_RS10145 PF00034 Cytochrome c DSUI_RS10145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS10150 PF00034 Cytochrome c DSUI_RS10155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS10165 PF03466 LysR substrate binding domain DSUI_RS10195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS10195 PF08447 PAS fold DSUI_RS10195 PF13426 PAS domain DSUI_RS10200 PF00149 Calcineurin-like phosphoesterase DSUI_RS10210 PF04542 Sigma-70 region 2 DSUI_RS10210 PF08281 Sigma-70, region 4 DSUI_RS10240 PF01695 IstB-like ATP binding protein DSUI_RS10245 PF00665 Integrase core domain DSUI_RS10270 PF00266 Aminotransferase class-V DSUI_RS10280 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS10290 PF03466 LysR substrate binding domain DSUI_RS10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS10295 PF00465 Iron-containing alcohol dehydrogenase DSUI_RS10300 PF01144 Coenzyme A transferase DSUI_RS10320 PF00005 ABC transporter DSUI_RS10325 PF09084 NMT1/THI5 like DSUI_RS10330 PF10442 FIST C domain DSUI_RS10330 PF08495 FIST N domain DSUI_RS10330 PF00563 EAL domain DSUI_RS10330 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS10335 PF17200 Single Cache domain 2 DSUI_RS10335 PF00672 HAMP domain DSUI_RS10335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS10340 PF00072 Response regulator receiver domain DSUI_RS10340 PF13426 PAS domain DSUI_RS10340 PF08448 PAS fold DSUI_RS10340 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS10345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DSUI_RS10345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DSUI_RS10350 PF00970 Oxidoreductase FAD-binding domain DSUI_RS10350 PF00175 Oxidoreductase NAD-binding domain DSUI_RS10360 PF00216 Bacterial DNA-binding protein DSUI_RS10365 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS10365 PF00593 TonB dependent receptor DSUI_RS10385 PF00696 Amino acid kinase family DSUI_RS10385 PF01842 ACT domain DSUI_RS10385 PF13840 ACT domain DSUI_RS10400 PF01242 6-pyruvoyl tetrahydropterin synthase DSUI_RS10405 PF02230 Phospholipase/Carboxylesterase DSUI_RS10440 PF01027 Inhibitor of apoptosis-promoting Bax1 DSUI_RS10445 PF00216 Bacterial DNA-binding protein DSUI_RS10450 PF04381 Putative exonuclease, RdgC DSUI_RS10455 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS10455 PF00563 EAL domain DSUI_RS10455 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS10460 PF04851 Type III restriction enzyme, res subunit DSUI_RS10460 PF13307 Helicase C-terminal domain DSUI_RS10470 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DSUI_RS10475 PF00994 Probable molybdopterin binding domain DSUI_RS10475 PF03454 MoeA C-terminal region (domain IV) DSUI_RS10475 PF03453 MoeA N-terminal region (domain I and II) DSUI_RS10480 PF02597 ThiS family DSUI_RS10485 PF02391 MoaE protein DSUI_RS10495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS10495 PF08269 Cache domain DSUI_RS10500 PF17200 Single Cache domain 2 DSUI_RS10500 PF07730 Histidine kinase DSUI_RS10505 PF00072 Response regulator receiver domain DSUI_RS10505 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS10510 PF00672 HAMP domain DSUI_RS10510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS10510 PF17200 Single Cache domain 2 DSUI_RS10515 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS10515 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS10515 PF00563 EAL domain DSUI_RS10520 PF17871 AAA lid domain DSUI_RS10520 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS10520 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS10520 PF10431 C-terminal, D2-small domain, of ClpB protein DSUI_RS10520 PF02861 Clp amino terminal domain, pathogenicity island component DSUI_RS10530 PF03692 Putative zinc- or iron-chelating domain DSUI_RS10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS10535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS10535 PF00072 Response regulator receiver domain DSUI_RS10535 PF01627 Hpt domain DSUI_RS10535 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS10535 PF00672 HAMP domain DSUI_RS10550 PF00593 TonB dependent receptor DSUI_RS10550 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS10555 PF00756 Putative esterase DSUI_RS10565 PF03929 PepSY-associated TM region DSUI_RS10575 PF01047 MarR family DSUI_RS10580 PF02566 OsmC-like protein DSUI_RS10590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DSUI_RS10590 PF01676 Metalloenzyme superfamily DSUI_RS10610 PF01613 Flavin reductase like domain DSUI_RS10640 PF03352 Methyladenine glycosylase DSUI_RS10650 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS10650 PF00501 AMP-binding enzyme DSUI_RS10660 PF13607 Succinyl-CoA ligase like flavodoxin domain DSUI_RS10660 PF00583 Acetyltransferase (GNAT) family DSUI_RS10660 PF13380 CoA binding domain DSUI_RS10670 PF01593 Flavin containing amine oxidoreductase DSUI_RS10690 PF05698 Bacterial trigger factor protein (TF) C-terminus DSUI_RS10690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSUI_RS10690 PF05697 Bacterial trigger factor protein (TF) DSUI_RS10695 PF00574 Clp protease DSUI_RS10700 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS10700 PF10431 C-terminal, D2-small domain, of ClpB protein DSUI_RS10700 PF06689 ClpX C4-type zinc finger DSUI_RS10705 PF02190 ATP-dependent protease La (LON) substrate-binding domain DSUI_RS10705 PF05362 Lon protease (S16) C-terminal proteolytic domain DSUI_RS10705 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS10710 PF00216 Bacterial DNA-binding protein DSUI_RS10725 PF05698 Bacterial trigger factor protein (TF) C-terminus DSUI_RS10740 PF00330 Aconitase family (aconitate hydratase) DSUI_RS10740 PF11791 Aconitate B N-terminal domain DSUI_RS10740 PF06434 Aconitate hydratase 2 N-terminus DSUI_RS10760 PF00056 lactate/malate dehydrogenase, NAD binding domain DSUI_RS10760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DSUI_RS10765 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS10765 PF07702 UTRA domain DSUI_RS10770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DSUI_RS10780 PF02910 Fumarate reductase flavoprotein C-term DSUI_RS10780 PF00890 FAD binding domain DSUI_RS10785 PF13085 2Fe-2S iron-sulfur cluster binding domain DSUI_RS10790 PF03937 Flavinator of succinate dehydrogenase DSUI_RS10795 PF00285 Citrate synthase, C-terminal domain DSUI_RS10800 PF00676 Dehydrogenase E1 component DSUI_RS10800 PF16078 2-oxoglutarate dehydrogenase N-terminus DSUI_RS10800 PF02779 Transketolase, pyrimidine binding domain DSUI_RS10800 PF16870 2-oxoglutarate dehydrogenase C-terminal DSUI_RS10805 PF00364 Biotin-requiring enzyme DSUI_RS10805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DSUI_RS10805 PF02817 e3 binding domain DSUI_RS10810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSUI_RS10810 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS10820 PF03969 AFG1-like ATPase DSUI_RS10830 PF13654 AAA domain DSUI_RS10830 PF05362 Lon protease (S16) C-terminal proteolytic domain DSUI_RS10835 PF04304 Protein of unknown function (DUF454) DSUI_RS10845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSUI_RS10850 PF08240 Alcohol dehydrogenase GroES-like domain DSUI_RS10850 PF00107 Zinc-binding dehydrogenase DSUI_RS10855 PF03466 LysR substrate binding domain DSUI_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS10860 PF03601 Conserved hypothetical protein 698 DSUI_RS10875 PF00141 Peroxidase DSUI_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS10890 PF12911 N-terminal TM domain of oligopeptide transport permease C DSUI_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS10900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSUI_RS10905 PF05958 tRNA (Uracil-5-)-methyltransferase DSUI_RS10910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS10910 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS10910 PF00672 HAMP domain DSUI_RS10910 PF01627 Hpt domain DSUI_RS10910 PF00072 Response regulator receiver domain DSUI_RS10915 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS10930 PF05190 MutS family domain IV DSUI_RS10930 PF05192 MutS domain III DSUI_RS10930 PF05188 MutS domain II DSUI_RS10930 PF01624 MutS domain I DSUI_RS10930 PF00488 MutS domain V DSUI_RS10935 PF09086 Domain of unknown function (DUF1924) DSUI_RS10950 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS10950 PF00072 Response regulator receiver domain DSUI_RS10955 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS10955 PF08521 Two-component sensor kinase N-terminal DSUI_RS10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS10960 PF01966 HD domain DSUI_RS10970 PF00155 Aminotransferase class I and II DSUI_RS10970 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS10975 PF03594 Benzoate membrane transport protein DSUI_RS10990 PF00970 Oxidoreductase FAD-binding domain DSUI_RS10990 PF00175 Oxidoreductase NAD-binding domain DSUI_RS10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS10995 PF03466 LysR substrate binding domain DSUI_RS11010 PF00392 Bacterial regulatory proteins, gntR family DSUI_RS11010 PF00155 Aminotransferase class I and II DSUI_RS11025 PF14579 Helix-hairpin-helix motif DSUI_RS11025 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSUI_RS11025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSUI_RS11025 PF02811 PHP domain DSUI_RS11045 PF00717 Peptidase S24-like DSUI_RS11045 PF01726 LexA DNA binding domain DSUI_RS11075 PF13443 Cro/C1-type HTH DNA-binding domain DSUI_RS11085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DSUI_RS11085 PF04717 Type VI secretion system, phage-baseplate injector DSUI_RS11085 PF13296 Putative type VI secretion system Rhs element Vgr DSUI_RS11135 PF11940 Domain of unknown function (DUF3458) Ig-like fold DSUI_RS11135 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DSUI_RS11135 PF01433 Peptidase family M1 domain DSUI_RS11145 PF02470 MlaD protein DSUI_RS11150 PF04403 Paraquat-inducible protein A DSUI_RS11165 PF00561 alpha/beta hydrolase fold DSUI_RS11165 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DSUI_RS11180 PF03975 CheD chemotactic sensory transduction DSUI_RS11185 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS11185 PF00501 AMP-binding enzyme DSUI_RS11205 PF00563 EAL domain DSUI_RS11205 PF12792 CSS motif domain associated with EAL DSUI_RS11210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSUI_RS11210 PF02770 Acyl-CoA dehydrogenase, middle domain DSUI_RS11210 PF12806 Acetyl-CoA dehydrogenase C-terminal like DSUI_RS11210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSUI_RS11220 PF01012 Electron transfer flavoprotein domain DSUI_RS11220 PF00766 Electron transfer flavoprotein FAD-binding domain DSUI_RS11225 PF01012 Electron transfer flavoprotein domain DSUI_RS11230 PF00440 Bacterial regulatory proteins, tetR family DSUI_RS11230 PF08359 YsiA-like protein, C-terminal region DSUI_RS11235 PF00005 ABC transporter DSUI_RS11240 PF13472 GDSL-like Lipase/Acylhydrolase family DSUI_RS11245 PF02769 AIR synthase related protein, C-terminal domain DSUI_RS11245 PF00586 AIR synthase related protein, N-terminal domain DSUI_RS11250 PF00581 Rhodanese-like domain DSUI_RS11255 PF00857 Isochorismatase family DSUI_RS11265 PF06418 CTP synthase N-terminus DSUI_RS11265 PF00117 Glutamine amidotransferase class-I DSUI_RS11270 PF00793 DAHP synthetase I family DSUI_RS11285 PF00113 Enolase, C-terminal TIM barrel domain DSUI_RS11285 PF03952 Enolase, N-terminal domain DSUI_RS11290 PF04977 Septum formation initiator DSUI_RS11310 PF03883 Peroxide stress protein YaaA DSUI_RS11345 PF01266 FAD dependent oxidoreductase DSUI_RS11350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSUI_RS11350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSUI_RS11360 PF00860 Permease family DSUI_RS11370 PF01207 Dihydrouridine synthase (Dus) DSUI_RS11390 PF00563 EAL domain DSUI_RS11390 PF08668 HDOD domain DSUI_RS11400 PF00005 ABC transporter DSUI_RS11425 PF00694 Aconitase C-terminal domain DSUI_RS11425 PF00330 Aconitase family (aconitate hydratase) DSUI_RS11435 PF10996 Beta-Casp domain DSUI_RS11435 PF00753 Metallo-beta-lactamase superfamily DSUI_RS11435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DSUI_RS11440 PF13411 MerR HTH family regulatory protein DSUI_RS11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS11455 PF03466 LysR substrate binding domain DSUI_RS11460 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DSUI_RS11465 PF01292 Prokaryotic cytochrome b561 DSUI_RS11475 PF04264 YceI-like domain DSUI_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS11480 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS11490 PF00072 Response regulator receiver domain DSUI_RS11490 PF00158 Sigma-54 interaction domain DSUI_RS11510 PF13407 Periplasmic binding protein domain DSUI_RS11520 PF00459 Inositol monophosphatase family DSUI_RS11525 PF00588 SpoU rRNA Methylase family DSUI_RS11530 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS11535 PF02082 Transcriptional regulator DSUI_RS11540 PF00266 Aminotransferase class-V DSUI_RS11545 PF00266 Aminotransferase class-V DSUI_RS11550 PF01592 NifU-like N terminal domain DSUI_RS11555 PF01521 Iron-sulphur cluster biosynthesis DSUI_RS11560 PF07743 HSCB C-terminal oligomerisation domain DSUI_RS11565 PF00012 Hsp70 protein DSUI_RS11570 PF00111 2Fe-2S iron-sulfur cluster binding domain DSUI_RS11575 PF04384 Iron-sulphur cluster assembly DSUI_RS11590 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS11595 PF00793 DAHP synthetase I family DSUI_RS11600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS11600 PF00072 Response regulator receiver domain DSUI_RS11600 PF00672 HAMP domain DSUI_RS11600 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS11600 PF01627 Hpt domain DSUI_RS11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS11615 PF02559 CarD-like/TRCF domain DSUI_RS11615 PF00270 DEAD/DEAH box helicase DSUI_RS11615 PF17757 UvrB interaction domain DSUI_RS11615 PF00271 Helicase conserved C-terminal domain DSUI_RS11615 PF03461 TRCF domain DSUI_RS11630 PF01875 Memo-like protein DSUI_RS11640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DSUI_RS11645 PF02542 YgbB family DSUI_RS11655 PF11871 Domain of unknown function (DUF3391) DSUI_RS11655 PF01966 HD domain DSUI_RS11690 PF00672 HAMP domain DSUI_RS11690 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS11695 PF00072 Response regulator receiver domain DSUI_RS11695 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS11705 PF00814 Glycoprotease family DSUI_RS11710 PF00583 Acetyltransferase (GNAT) family DSUI_RS11715 PF03167 Uracil DNA glycosylase superfamily DSUI_RS11720 PF04011 LemA family DSUI_RS11725 PF04536 TPM domain DSUI_RS11735 PF07690 Major Facilitator Superfamily DSUI_RS11740 PF03466 LysR substrate binding domain DSUI_RS11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS11745 PF01168 Alanine racemase, N-terminal domain DSUI_RS11745 PF00842 Alanine racemase, C-terminal domain DSUI_RS11760 PF18073 Rubredoxin metal binding domain DSUI_RS11780 PF00009 Elongation factor Tu GTP binding domain DSUI_RS11780 PF03144 Elongation factor Tu domain 2 DSUI_RS11780 PF16658 Class II release factor RF3, C-terminal domain DSUI_RS11785 PF00563 EAL domain DSUI_RS11785 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS11785 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS11790 PF08497 Radical SAM N-terminal DSUI_RS11790 PF04055 Radical SAM superfamily DSUI_RS11790 PF11842 Domain of unknown function (DUF3362) DSUI_RS11795 PF08495 FIST N domain DSUI_RS11795 PF10442 FIST C domain DSUI_RS11795 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS11795 PF00563 EAL domain DSUI_RS11805 PF00679 Elongation factor G C-terminus DSUI_RS11805 PF00009 Elongation factor Tu GTP binding domain DSUI_RS11805 PF03144 Elongation factor Tu domain 2 DSUI_RS11810 PF00563 EAL domain DSUI_RS11810 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS11810 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS11820 PF06463 Molybdenum Cofactor Synthesis C DSUI_RS11820 PF04055 Radical SAM superfamily DSUI_RS11850 PF00155 Aminotransferase class I and II DSUI_RS11855 PF04851 Type III restriction enzyme, res subunit DSUI_RS11855 PF17757 UvrB interaction domain DSUI_RS11855 PF02151 UvrB/uvrC motif DSUI_RS11855 PF12344 Ultra-violet resistance protein B DSUI_RS11855 PF00271 Helicase conserved C-terminal domain DSUI_RS11860 PF01451 Low molecular weight phosphotyrosine protein phosphatase DSUI_RS11865 PF10150 Ribonuclease E/G family DSUI_RS11865 PF00575 S1 RNA binding domain DSUI_RS11865 PF12111 Polyribonucleotide phosphorylase C terminal DSUI_RS11870 PF00849 RNA pseudouridylate synthase DSUI_RS11870 PF01479 S4 domain DSUI_RS11875 PF13419 Haloacid dehalogenase-like hydrolase DSUI_RS11885 PF06965 Na+/H+ antiporter 1 DSUI_RS11885 PF01343 Peptidase family S49 DSUI_RS11890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS11895 PF02545 Maf-like protein DSUI_RS11900 PF02620 Large ribosomal RNA subunit accumulation protein YceD DSUI_RS11905 PF01783 Ribosomal L32p protein family DSUI_RS11910 PF02504 Fatty acid synthesis protein DSUI_RS11915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DSUI_RS11915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DSUI_RS11920 PF00698 Acyl transferase domain DSUI_RS11930 PF00550 Phosphopantetheine attachment site DSUI_RS11935 PF00109 Beta-ketoacyl synthase, N-terminal domain DSUI_RS11935 PF02801 Beta-ketoacyl synthase, C-terminal domain DSUI_RS11945 PF02910 Fumarate reductase flavoprotein C-term DSUI_RS11945 PF00890 FAD binding domain DSUI_RS11950 PF08281 Sigma-70, region 4 DSUI_RS11950 PF04542 Sigma-70 region 2 DSUI_RS11960 PF13180 PDZ domain DSUI_RS11970 PF06421 GTP-binding protein LepA C-terminus DSUI_RS11970 PF03144 Elongation factor Tu domain 2 DSUI_RS11970 PF00009 Elongation factor Tu GTP binding domain DSUI_RS11970 PF00679 Elongation factor G C-terminus DSUI_RS11975 PF10502 Signal peptidase, peptidase S26 DSUI_RS11985 PF00035 Double-stranded RNA binding motif DSUI_RS11985 PF14622 Ribonuclease-III-like DSUI_RS11990 PF07650 KH domain DSUI_RS11990 PF01926 50S ribosome-binding GTPase DSUI_RS11995 PF02565 Recombination protein O C terminal DSUI_RS11995 PF11967 Recombination protein O N terminal DSUI_RS12000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DSUI_RS12005 PF01648 4'-phosphopantetheinyl transferase superfamily DSUI_RS12010 PF00933 Glycosyl hydrolase family 3 N terminal domain DSUI_RS12015 PF14743 DNA ligase OB-like domain DSUI_RS12015 PF01068 ATP dependent DNA ligase domain DSUI_RS12020 PF01132 Elongation factor P (EF-P) OB domain DSUI_RS12020 PF09285 Elongation factor P, C-terminal DSUI_RS12020 PF08207 Elongation factor P (EF-P) KOW-like domain DSUI_RS12035 PF02151 UvrB/uvrC motif DSUI_RS12035 PF08459 UvrC Helix-hairpin-helix N-terminal DSUI_RS12035 PF01541 GIY-YIG catalytic domain DSUI_RS12040 PF01066 CDP-alcohol phosphatidyltransferase DSUI_RS12090 PF00929 Exonuclease DSUI_RS12095 PF00075 RNase H DSUI_RS12100 PF01209 ubiE/COQ5 methyltransferase family DSUI_RS12105 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSUI_RS12105 PF00753 Metallo-beta-lactamase superfamily DSUI_RS12110 PF00072 Response regulator receiver domain DSUI_RS12115 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS12115 PF01590 GAF domain DSUI_RS12115 PF00360 Phytochrome region DSUI_RS12115 PF00563 EAL domain DSUI_RS12120 PF02646 RmuC family DSUI_RS12135 PF00069 Protein kinase domain DSUI_RS12135 PF03793 PASTA domain DSUI_RS12145 PF00239 Resolvase, N terminal domain DSUI_RS12145 PF02796 Helix-turn-helix domain of resolvase DSUI_RS12150 PF09278 MerR, DNA binding DSUI_RS12150 PF00376 MerR family regulatory protein DSUI_RS12155 PF02411 MerT mercuric transport protein DSUI_RS12160 PF00403 Heavy-metal-associated domain DSUI_RS12170 PF00403 Heavy-metal-associated domain DSUI_RS12170 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS12170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSUI_RS12175 PF13411 MerR HTH family regulatory protein DSUI_RS12180 PF05052 MerE protein DSUI_RS12185 PF02796 Helix-turn-helix domain of resolvase DSUI_RS12185 PF00239 Resolvase, N terminal domain DSUI_RS12215 PF00665 Integrase core domain DSUI_RS12215 PF13936 Helix-turn-helix domain DSUI_RS12225 PF13247 4Fe-4S dicluster domain DSUI_RS12230 PF03916 Polysulphide reductase, NrfD DSUI_RS12235 PF01568 Molydopterin dinucleotide binding domain DSUI_RS12235 PF00384 Molybdopterin oxidoreductase DSUI_RS12235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSUI_RS12240 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS12240 PF00072 Response regulator receiver domain DSUI_RS12245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS12245 PF00989 PAS fold DSUI_RS12245 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS12250 PF01653 NAD-dependent DNA ligase adenylation domain DSUI_RS12250 PF03120 NAD-dependent DNA ligase OB-fold domain DSUI_RS12250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DSUI_RS12250 PF00533 BRCA1 C Terminus (BRCT) domain DSUI_RS12250 PF12826 Helix-hairpin-helix motif DSUI_RS12280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS12280 PF08447 PAS fold DSUI_RS12280 PF13426 PAS domain DSUI_RS12285 PF00460 Flagella basal body rod protein DSUI_RS12285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DSUI_RS12290 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS12310 PF02796 Helix-turn-helix domain of resolvase DSUI_RS12310 PF00239 Resolvase, N terminal domain DSUI_RS12320 PF00069 Protein kinase domain DSUI_RS12320 PF03793 PASTA domain DSUI_RS12325 PF13525 Outer membrane lipoprotein DSUI_RS12330 PF00849 RNA pseudouridylate synthase DSUI_RS12335 PF02578 Multi-copper polyphenol oxidoreductase laccase DSUI_RS12340 PF03480 Bacterial extracellular solute-binding protein, family 7 DSUI_RS12345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DSUI_RS12350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSUI_RS12365 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DSUI_RS12370 PF00106 short chain dehydrogenase DSUI_RS12375 PF07879 PHB/PHA accumulation regulator DNA-binding domain DSUI_RS12375 PF05233 PHB accumulation regulatory domain DSUI_RS12380 PF04055 Radical SAM superfamily DSUI_RS12380 PF00919 Uncharacterized protein family UPF0004 DSUI_RS12380 PF18693 TRAM domain DSUI_RS12385 PF01734 Patatin-like phospholipase DSUI_RS12390 PF01565 FAD binding domain DSUI_RS12390 PF02913 FAD linked oxidases, C-terminal domain DSUI_RS12400 PF01430 Hsp33 protein DSUI_RS12405 PF03960 ArsC family DSUI_RS12410 PF00575 S1 RNA binding domain DSUI_RS12410 PF17674 HHH domain DSUI_RS12410 PF09371 Tex-like protein N-terminal domain DSUI_RS12410 PF16921 Tex protein YqgF-like domain DSUI_RS12415 PF13188 PAS domain DSUI_RS12415 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS12415 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS12415 PF00563 EAL domain DSUI_RS12420 PF02623 FliW protein DSUI_RS12455 PF00665 Integrase core domain DSUI_RS12460 PF01695 IstB-like ATP binding protein DSUI_RS12575 PF00437 Type II/IV secretion system protein DSUI_RS12650 PF00437 Type II/IV secretion system protein DSUI_RS12665 PF00437 Type II/IV secretion system protein DSUI_RS12675 PF00589 Phage integrase family DSUI_RS12675 PF02899 Phage integrase, N-terminal SAM-like domain DSUI_RS12725 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS12725 PF13188 PAS domain DSUI_RS12725 PF00563 EAL domain DSUI_RS12725 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS12730 PF01464 Transglycosylase SLT domain DSUI_RS12740 PF01751 Toprim domain DSUI_RS12740 PF01131 DNA topoisomerase DSUI_RS12785 PF04381 Putative exonuclease, RdgC DSUI_RS12805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DSUI_RS12815 PF00589 Phage integrase family DSUI_RS12815 PF02899 Phage integrase, N-terminal SAM-like domain DSUI_RS12840 PF11525 Copper resistance protein K DSUI_RS12845 PF00072 Response regulator receiver domain DSUI_RS12850 PF00460 Flagella basal body rod protein DSUI_RS12885 PF00873 AcrB/AcrD/AcrF family DSUI_RS12890 PF13533 Biotin-lipoyl like DSUI_RS12915 PF07732 Multicopper oxidase DSUI_RS12915 PF07731 Multicopper oxidase DSUI_RS12930 PF00072 Response regulator receiver domain DSUI_RS12930 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS12935 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS12935 PF00672 HAMP domain DSUI_RS12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS12940 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS12940 PF17862 AAA+ lid domain DSUI_RS12940 PF06480 FtsH Extracellular DSUI_RS12940 PF01434 Peptidase family M41 DSUI_RS12955 PF01526 Tn3 transposase DDE domain DSUI_RS12955 PF13700 Domain of unknown function (DUF4158) DSUI_RS12965 PF03480 Bacterial extracellular solute-binding protein, family 7 DSUI_RS12975 PF01026 TatD related DNase DSUI_RS12985 PF09115 DNA polymerase III, delta subunit, C terminal DSUI_RS12990 PF02223 Thymidylate kinase DSUI_RS12995 PF02618 YceG-like family DSUI_RS13000 PF01571 Aminomethyltransferase folate-binding domain DSUI_RS13010 PF00313 'Cold-shock' DNA-binding domain DSUI_RS13020 PF14437 MafB19-like deaminase DSUI_RS13040 PF05368 NmrA-like family DSUI_RS13045 PF01638 HxlR-like helix-turn-helix DSUI_RS13065 PF00117 Glutamine amidotransferase class-I DSUI_RS13065 PF02540 NAD synthase DSUI_RS13065 PF00958 GMP synthase C terminal domain DSUI_RS13070 PF00571 CBS domain DSUI_RS13070 PF00478 IMP dehydrogenase / GMP reductase domain DSUI_RS13080 PF03658 RnfH family Ubiquitin DSUI_RS13085 PF03364 Polyketide cyclase / dehydrase and lipid transport DSUI_RS13090 PF01668 SmpB protein DSUI_RS13095 PF03458 UPF0126 domain DSUI_RS13100 PF02896 PEP-utilising enzyme, TIM barrel domain DSUI_RS13100 PF00391 PEP-utilising enzyme, mobile domain DSUI_RS13100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DSUI_RS13105 PF03618 Kinase/pyrophosphorylase DSUI_RS13110 PF00588 SpoU rRNA Methylase family DSUI_RS13110 PF08032 RNA 2'-O ribose methyltransferase substrate binding DSUI_RS13115 PF01351 Ribonuclease HII DSUI_RS13120 PF02684 Lipid-A-disaccharide synthetase DSUI_RS13125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DSUI_RS13125 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS13130 PF07977 FabA-like domain DSUI_RS13135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DSUI_RS13135 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS13145 PF07244 Surface antigen variable number repeat DSUI_RS13145 PF01103 Surface antigen DSUI_RS13150 PF02163 Peptidase family M50 DSUI_RS13150 PF17820 PDZ domain DSUI_RS13150 PF13180 PDZ domain DSUI_RS13155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DSUI_RS13155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DSUI_RS13155 PF13288 DXP reductoisomerase C-terminal domain DSUI_RS13165 PF01255 Putative undecaprenyl diphosphate synthase DSUI_RS13170 PF01765 Ribosome recycling factor DSUI_RS13175 PF00696 Amino acid kinase family DSUI_RS13180 PF00889 Elongation factor TS DSUI_RS13185 PF00318 Ribosomal protein S2 DSUI_RS13190 PF00557 Metallopeptidase family M24 DSUI_RS13195 PF08335 GlnD PII-uridylyltransferase DSUI_RS13195 PF01966 HD domain DSUI_RS13195 PF01909 Nucleotidyltransferase domain DSUI_RS13200 PF01327 Polypeptide deformylase DSUI_RS13205 PF01048 Phosphorylase superfamily DSUI_RS13210 PF00156 Phosphoribosyl transferase domain DSUI_RS13215 PF00483 Nucleotidyl transferase DSUI_RS13220 PF12826 Helix-hairpin-helix motif DSUI_RS13220 PF00533 BRCA1 C Terminus (BRCT) domain DSUI_RS13220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DSUI_RS13220 PF01653 NAD-dependent DNA ligase adenylation domain DSUI_RS13220 PF03120 NAD-dependent DNA ligase OB-fold domain DSUI_RS13230 PF02463 RecF/RecN/SMC N terminal domain DSUI_RS13230 PF06470 SMC proteins Flexible Hinge Domain DSUI_RS13235 PF03695 Uncharacterised protein family (UPF0149) DSUI_RS13235 PF02810 SEC-C motif DSUI_RS13240 PF00860 Permease family DSUI_RS13245 PF00156 Phosphoribosyl transferase domain DSUI_RS13255 PF00155 Aminotransferase class I and II DSUI_RS13260 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DSUI_RS13260 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS13260 PF14602 Hexapeptide repeat of succinyl-transferase DSUI_RS13265 PF00437 Type II/IV secretion system protein DSUI_RS13270 PF07687 Peptidase dimerisation domain DSUI_RS13270 PF01546 Peptidase family M20/M25/M40 DSUI_RS13275 PF05175 Methyltransferase small domain DSUI_RS13280 PF12221 Bacterial membrane protein N terminal DSUI_RS13280 PF01145 SPFH domain / Band 7 family DSUI_RS13300 PF01258 Prokaryotic dksA/traR C4-type zinc finger DSUI_RS13305 PF03725 3' exoribonuclease family, domain 2 DSUI_RS13305 PF01138 3' exoribonuclease family, domain 1 DSUI_RS13305 PF00013 KH domain DSUI_RS13305 PF00575 S1 RNA binding domain DSUI_RS13305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DSUI_RS13310 PF00312 Ribosomal protein S15 DSUI_RS13315 PF01509 TruB family pseudouridylate synthase (N terminal domain) DSUI_RS13315 PF09157 Pseudouridine synthase II TruB, C-terminal DSUI_RS13315 PF16198 tRNA pseudouridylate synthase B C-terminal domain DSUI_RS13320 PF02033 Ribosome-binding factor A DSUI_RS13325 PF00009 Elongation factor Tu GTP binding domain DSUI_RS13325 PF11987 Translation-initiation factor 2 DSUI_RS13325 PF08364 Bacterial translation initiation factor IF-2 associated region DSUI_RS13325 PF04760 Translation initiation factor IF-2, N-terminal region DSUI_RS13330 PF08529 NusA N-terminal domain DSUI_RS13330 PF13184 NusA-like KH domain DSUI_RS13335 PF17384 RimP C-terminal SH3 domain DSUI_RS13335 PF02576 RimP N-terminal domain DSUI_RS13340 PF01479 S4 domain DSUI_RS13340 PF00849 RNA pseudouridylate synthase DSUI_RS13345 PF04079 Segregation and condensation complex subunit ScpB DSUI_RS13350 PF02616 Segregation and condensation protein ScpA DSUI_RS13355 PF00579 tRNA synthetases class I (W and Y) DSUI_RS13360 PF02163 Peptidase family M50 DSUI_RS13365 PF01300 Telomere recombination DSUI_RS13370 PF02811 PHP domain DSUI_RS13375 PF00561 alpha/beta hydrolase fold DSUI_RS13380 PF00210 Ferritin-like domain DSUI_RS13390 PF01571 Aminomethyltransferase folate-binding domain DSUI_RS13390 PF08669 Glycine cleavage T-protein C-terminal barrel domain DSUI_RS13395 PF01597 Glycine cleavage H-protein DSUI_RS13400 PF02347 Glycine cleavage system P-protein DSUI_RS13410 PF02817 e3 binding domain DSUI_RS13410 PF00364 Biotin-requiring enzyme DSUI_RS13410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DSUI_RS13425 PF00012 Hsp70 protein DSUI_RS13440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS13445 PF12848 ABC transporter DSUI_RS13445 PF00005 ABC transporter DSUI_RS13450 PF05675 Protein of unknown function (DUF817) DSUI_RS13465 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS13465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSUI_RS13465 PF08245 Mur ligase middle domain DSUI_RS13470 PF08443 RimK-like ATP-grasp domain DSUI_RS13470 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS13470 PF08245 Mur ligase middle domain DSUI_RS13475 PF00664 ABC transporter transmembrane region DSUI_RS13475 PF00005 ABC transporter DSUI_RS13485 PF12392 Collagenase DSUI_RS13485 PF01136 Peptidase family U32 DSUI_RS13490 PF04102 SlyX DSUI_RS13500 PF17284 Spermidine synthase tetramerisation domain DSUI_RS13505 PF17785 PUA-like domain DSUI_RS13505 PF10672 S-adenosylmethionine-dependent methyltransferase DSUI_RS13510 PF00849 RNA pseudouridylate synthase DSUI_RS13510 PF01479 S4 domain DSUI_RS13515 PF01176 Translation initiation factor 1A / IF-1 DSUI_RS13530 PF01926 50S ribosome-binding GTPase DSUI_RS13540 PF02308 MgtC family DSUI_RS13545 PF01636 Phosphotransferase enzyme family DSUI_RS13565 PF00912 Transglycosylase DSUI_RS13565 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS13570 PF07152 YaeQ protein DSUI_RS13595 PF01546 Peptidase family M20/M25/M40 DSUI_RS13595 PF07687 Peptidase dimerisation domain DSUI_RS13600 PF00132 Bacterial transferase hexapeptide (six repeats) DSUI_RS13610 PF00072 Response regulator receiver domain DSUI_RS13615 PF00672 HAMP domain DSUI_RS13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS13615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS13615 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS13615 PF01627 Hpt domain DSUI_RS13615 PF00072 Response regulator receiver domain DSUI_RS13620 PF00072 Response regulator receiver domain DSUI_RS13625 PF00072 Response regulator receiver domain DSUI_RS13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS13640 PF00521 DNA gyrase/topoisomerase IV, subunit A DSUI_RS13645 PF01751 Toprim domain DSUI_RS13645 PF00204 DNA gyrase B DSUI_RS13645 PF00986 DNA gyrase B subunit, carboxyl terminus DSUI_RS13645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS13650 PF00912 Transglycosylase DSUI_RS13650 PF00905 Penicillin binding protein transpeptidase domain DSUI_RS13660 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSUI_RS13695 PF02146 Sir2 family DSUI_RS13700 PF01476 LysM domain DSUI_RS13700 PF01464 Transglycosylase SLT domain DSUI_RS13705 PF07690 Major Facilitator Superfamily DSUI_RS13710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSUI_RS13710 PF00005 ABC transporter DSUI_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS13715 PF12911 N-terminal TM domain of oligopeptide transport permease C DSUI_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS13725 PF13247 4Fe-4S dicluster domain DSUI_RS13725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DSUI_RS13725 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS13735 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS13735 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS13735 PF00563 EAL domain DSUI_RS13740 PF00892 EamA-like transporter family DSUI_RS13750 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS13755 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS13755 PF00501 AMP-binding enzyme DSUI_RS13770 PF00005 ABC transporter DSUI_RS13775 PF02405 Permease MlaE DSUI_RS13780 PF02541 Ppx/GppA phosphatase family DSUI_RS13785 PF17941 Polyphosphate kinase C-terminal domain 1 DSUI_RS13785 PF02503 Polyphosphate kinase middle domain DSUI_RS13785 PF13089 Polyphosphate kinase N-terminal domain DSUI_RS13785 PF13090 Polyphosphate kinase C-terminal domain 2 DSUI_RS13790 PF03358 NADPH-dependent FMN reductase DSUI_RS13795 PF13291 ACT domain DSUI_RS13795 PF04607 Region found in RelA / SpoT proteins DSUI_RS13795 PF02824 TGS domain DSUI_RS13805 PF06167 Glucose-regulated metallo-peptidase M90 DSUI_RS13815 PF00561 alpha/beta hydrolase fold DSUI_RS13820 PF07885 Ion channel DSUI_RS13820 PF02254 TrkA-N domain DSUI_RS13830 PF03772 Competence protein DSUI_RS13830 PF00753 Metallo-beta-lactamase superfamily DSUI_RS13865 PF01381 Helix-turn-helix DSUI_RS13910 PF01695 IstB-like ATP binding protein DSUI_RS13945 PF05860 haemagglutination activity domain DSUI_RS13945 PF13332 Hemagglutinin repeat DSUI_RS13945 PF13018 Extended Signal Peptide of Type V secretion system DSUI_RS13945 PF04829 Pre-toxin domain with VENN motif DSUI_RS13955 PF08479 POTRA domain, ShlB-type DSUI_RS13955 PF17287 POTRA domain DSUI_RS13955 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DSUI_RS13960 PF03772 Competence protein DSUI_RS13960 PF00753 Metallo-beta-lactamase superfamily DSUI_RS13965 PF00672 HAMP domain DSUI_RS13965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS13965 PF16591 Helical bimodular sensor domain DSUI_RS13970 PF00005 ABC transporter DSUI_RS13975 PF12704 MacB-like periplasmic core domain DSUI_RS13975 PF02687 FtsX-like permease family DSUI_RS13985 PF02272 DHHA1 domain DSUI_RS13985 PF01368 DHH family DSUI_RS13985 PF17768 RecJ OB domain DSUI_RS13990 PF00892 EamA-like transporter family DSUI_RS14000 PF00152 tRNA synthetases class II (D, K and N) DSUI_RS14000 PF01336 OB-fold nucleic acid binding domain DSUI_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS14005 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS14005 PF01627 Hpt domain DSUI_RS14005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS14005 PF00672 HAMP domain DSUI_RS14005 PF00072 Response regulator receiver domain DSUI_RS14015 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS14015 PF00593 TonB dependent receptor DSUI_RS14025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DSUI_RS14025 PF01266 FAD dependent oxidoreductase DSUI_RS14030 PF03466 LysR substrate binding domain DSUI_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS14045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSUI_RS14050 PF00578 AhpC/TSA family DSUI_RS14060 PF02321 Outer membrane efflux protein DSUI_RS14065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS14070 PF12704 MacB-like periplasmic core domain DSUI_RS14070 PF00005 ABC transporter DSUI_RS14070 PF02687 FtsX-like permease family DSUI_RS14075 PF02687 FtsX-like permease family DSUI_RS14075 PF12704 MacB-like periplasmic core domain DSUI_RS14075 PF00005 ABC transporter DSUI_RS14080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS14080 PF08269 Cache domain DSUI_RS14085 PF00202 Aminotransferase class-III DSUI_RS14090 PF00155 Aminotransferase class I and II DSUI_RS14095 PF12697 Alpha/beta hydrolase family DSUI_RS14100 PF08241 Methyltransferase domain DSUI_RS14115 PF04279 Intracellular septation protein A DSUI_RS14120 PF03795 YCII-related domain DSUI_RS14135 PF12792 CSS motif domain associated with EAL DSUI_RS14135 PF00563 EAL domain DSUI_RS14145 PF02769 AIR synthase related protein, C-terminal domain DSUI_RS14145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DSUI_RS14145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DSUI_RS14150 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS14150 PF05230 MASE2 domain DSUI_RS14165 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS14165 PF00593 TonB dependent receptor DSUI_RS14170 PF00850 Histone deacetylase domain DSUI_RS14175 PF01256 Carbohydrate kinase DSUI_RS14175 PF03853 YjeF-related protein N-terminus DSUI_RS14185 PF01645 Conserved region in glutamate synthase DSUI_RS14190 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DSUI_RS14190 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DSUI_RS14195 PF17827 PrmC N-terminal domain DSUI_RS14195 PF05175 Methyltransferase small domain DSUI_RS14200 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS14200 PF14821 Threonine synthase N terminus DSUI_RS14205 PF00669 Bacterial flagellin N-terminal helical region DSUI_RS14205 PF00700 Bacterial flagellin C-terminal helical region DSUI_RS14215 PF01842 ACT domain DSUI_RS14215 PF03447 Homoserine dehydrogenase, NAD binding domain DSUI_RS14215 PF00742 Homoserine dehydrogenase DSUI_RS14220 PF00155 Aminotransferase class I and II DSUI_RS14225 PF00155 Aminotransferase class I and II DSUI_RS14240 PF01522 Polysaccharide deacetylase DSUI_RS14245 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS14250 PF01292 Prokaryotic cytochrome b561 DSUI_RS14280 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS14280 PF00501 AMP-binding enzyme DSUI_RS14290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSUI_RS14290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSUI_RS14305 PF00501 AMP-binding enzyme DSUI_RS14305 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS14305 PF16177 Acetyl-coenzyme A synthetase N-terminus DSUI_RS14310 PF00072 Response regulator receiver domain DSUI_RS14310 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS14315 PF00877 NlpC/P60 family DSUI_RS14320 PF13416 Bacterial extracellular solute-binding protein DSUI_RS14345 PF00873 AcrB/AcrD/AcrF family DSUI_RS14355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DSUI_RS14355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DSUI_RS14360 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DSUI_RS14365 PF02233 NAD(P) transhydrogenase beta subunit DSUI_RS14390 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS14395 PF00005 ABC transporter DSUI_RS14395 PF08402 TOBE domain DSUI_RS14400 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS14410 PF00271 Helicase conserved C-terminal domain DSUI_RS14410 PF00270 DEAD/DEAH box helicase DSUI_RS14410 PF03880 DbpA RNA binding domain DSUI_RS14415 PF01863 Protein of unknown function DUF45 DSUI_RS14420 PF08281 Sigma-70, region 4 DSUI_RS14420 PF04542 Sigma-70 region 2 DSUI_RS14425 PF16220 Domain of unknown function (DUF4880) DSUI_RS14425 PF04773 FecR protein DSUI_RS14430 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS14430 PF00593 TonB dependent receptor DSUI_RS14445 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS14455 PF01891 Cobalt uptake substrate-specific transmembrane region DSUI_RS14460 PF02553 Cobalt transport protein component CbiN DSUI_RS14470 PF00005 ABC transporter DSUI_RS14475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS14480 PF01903 CbiX DSUI_RS14485 PF02570 Precorrin-8X methylmutase DSUI_RS14490 PF01888 CbiD DSUI_RS14495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS14505 PF01890 Cobalamin synthesis G C-terminus DSUI_RS14505 PF11761 Cobalamin biosynthesis central region DSUI_RS14505 PF11760 Cobalamin synthesis G N-terminal DSUI_RS14515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DSUI_RS14515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS14525 PF10414 Sirohaem synthase dimerisation region DSUI_RS14525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS14525 PF14824 Sirohaem biosynthesis protein central DSUI_RS14535 PF01734 Patatin-like phospholipase DSUI_RS14540 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DSUI_RS14545 PF04376 Arginine-tRNA-protein transferase, N terminus DSUI_RS14545 PF04377 Arginine-tRNA-protein transferase, C terminus DSUI_RS14555 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS14555 PF00593 TonB dependent receptor DSUI_RS14565 PF08281 Sigma-70, region 4 DSUI_RS14565 PF04542 Sigma-70 region 2 DSUI_RS14570 PF01180 Dihydroorotate dehydrogenase DSUI_RS14575 PF02508 Rnf-Nqr subunit, membrane protein DSUI_RS14580 PF04060 Putative Fe-S cluster DSUI_RS14585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSUI_RS14585 PF12838 4Fe-4S dicluster domain DSUI_RS14585 PF13375 RnfC Barrel sandwich hybrid domain DSUI_RS14590 PF03116 NQR2, RnfD, RnfE family DSUI_RS14595 PF04205 FMN-binding domain DSUI_RS14600 PF02508 Rnf-Nqr subunit, membrane protein DSUI_RS14605 PF00730 HhH-GPD superfamily base excision DNA repair protein DSUI_RS14605 PF00633 Helix-hairpin-helix motif DSUI_RS14605 PF10576 Iron-sulfur binding domain of endonuclease III DSUI_RS14625 PF08447 PAS fold DSUI_RS14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS14630 PF17862 AAA+ lid domain DSUI_RS14630 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS14630 PF01434 Peptidase family M41 DSUI_RS14635 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS14650 PF00300 Histidine phosphatase superfamily (branch 1) DSUI_RS14660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSUI_RS14660 PF00437 Type II/IV secretion system protein DSUI_RS14680 PF00072 Response regulator receiver domain DSUI_RS14685 PF00072 Response regulator receiver domain DSUI_RS14695 PF00183 Hsp90 protein DSUI_RS14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS14705 PF03449 Transcription elongation factor, N-terminal DSUI_RS14705 PF01272 Transcription elongation factor, GreA/GreB, C-term DSUI_RS14715 PF01455 HupF/HypC family DSUI_RS14720 PF01750 Hydrogenase maturation protease DSUI_RS14725 PF00374 Nickel-dependent hydrogenase DSUI_RS14730 PF03916 Polysulphide reductase, NrfD DSUI_RS14735 PF13247 4Fe-4S dicluster domain DSUI_RS14740 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DSUI_RS14740 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSUI_RS14770 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS14775 PF12697 Alpha/beta hydrolase family DSUI_RS14790 PF01384 Phosphate transporter family DSUI_RS14810 PF00374 Nickel-dependent hydrogenase DSUI_RS14815 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSUI_RS14820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DSUI_RS14825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSUI_RS14825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSUI_RS14835 PF01515 Phosphate acetyl/butaryl transferase DSUI_RS14840 PF00871 Acetokinase family DSUI_RS14845 PF03477 ATP cone domain DSUI_RS14845 PF00317 Ribonucleotide reductase, all-alpha domain DSUI_RS14845 PF02867 Ribonucleotide reductase, barrel domain DSUI_RS14850 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS14855 PF00293 NUDIX domain DSUI_RS14860 PF00361 Proton-conducting membrane transporter DSUI_RS14865 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DSUI_RS14865 PF00361 Proton-conducting membrane transporter DSUI_RS14870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DSUI_RS14870 PF00361 Proton-conducting membrane transporter DSUI_RS14875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DSUI_RS14880 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DSUI_RS14885 PF12838 4Fe-4S dicluster domain DSUI_RS14890 PF00146 NADH dehydrogenase DSUI_RS14895 PF00384 Molybdopterin oxidoreductase DSUI_RS14895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DSUI_RS14895 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DSUI_RS14900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSUI_RS14900 PF10531 SLBB domain DSUI_RS14900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSUI_RS14910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DSUI_RS14915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DSUI_RS14920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSUI_RS14925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DSUI_RS14935 PF03840 Preprotein translocase SecG subunit DSUI_RS14940 PF00121 Triosephosphate isomerase DSUI_RS14945 PF00005 ABC transporter DSUI_RS14950 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS14955 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS14960 PF12849 PBP superfamily domain DSUI_RS14965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DSUI_RS14965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DSUI_RS14965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DSUI_RS14965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DSUI_RS14970 PF00809 Pterin binding enzyme DSUI_RS14975 PF06480 FtsH Extracellular DSUI_RS14975 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS14975 PF17862 AAA+ lid domain DSUI_RS14975 PF01434 Peptidase family M41 DSUI_RS14980 PF01728 FtsJ-like methyltransferase DSUI_RS14985 PF01985 CRS1 / YhbY (CRM) domain DSUI_RS14995 PF01272 Transcription elongation factor, GreA/GreB, C-term DSUI_RS14995 PF03449 Transcription elongation factor, N-terminal DSUI_RS15000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DSUI_RS15000 PF02142 MGS-like domain DSUI_RS15000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSUI_RS15005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DSUI_RS15005 PF00117 Glutamine amidotransferase class-I DSUI_RS15010 PF01113 Dihydrodipicolinate reductase, N-terminus DSUI_RS15010 PF05173 Dihydrodipicolinate reductase, C-terminus DSUI_RS15015 PF04355 SmpA / OmlA family DSUI_RS15020 PF01475 Ferric uptake regulator family DSUI_RS15025 PF01169 Uncharacterized protein family UPF0016 DSUI_RS15040 PF02463 RecF/RecN/SMC N terminal domain DSUI_RS15045 PF01513 ATP-NAD kinase DSUI_RS15050 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DSUI_RS15050 PF01628 HrcA protein C terminal domain DSUI_RS15055 PF00762 Ferrochelatase DSUI_RS15060 PF00085 Thioredoxin DSUI_RS15070 PF00672 HAMP domain DSUI_RS15070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS15070 PF17200 Single Cache domain 2 DSUI_RS15075 PF00069 Protein kinase domain DSUI_RS15075 PF03793 PASTA domain DSUI_RS15080 PF01025 GrpE DSUI_RS15085 PF00012 Hsp70 protein DSUI_RS15090 PF01556 DnaJ C terminal domain DSUI_RS15090 PF00684 DnaJ central domain DSUI_RS15090 PF00226 DnaJ domain DSUI_RS15100 PF01406 tRNA synthetases class I (C) catalytic domain DSUI_RS15100 PF09190 DALR domain DSUI_RS15115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DSUI_RS15120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DSUI_RS15125 PF00149 Calcineurin-like phosphoesterase DSUI_RS15135 PF03741 Integral membrane protein TerC family DSUI_RS15140 PF00271 Helicase conserved C-terminal domain DSUI_RS15140 PF16124 RecQ zinc-binding DSUI_RS15140 PF09382 RQC domain DSUI_RS15140 PF00570 HRDC domain DSUI_RS15140 PF00270 DEAD/DEAH box helicase DSUI_RS15150 PF01966 HD domain DSUI_RS15165 PF02805 Metal binding domain of Ada DSUI_RS15165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DSUI_RS15165 PF12833 Helix-turn-helix domain DSUI_RS15165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DSUI_RS15170 PF13532 2OG-Fe(II) oxygenase superfamily DSUI_RS15185 PF03466 LysR substrate binding domain DSUI_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS15190 PF12804 MobA-like NTP transferase domain DSUI_RS15200 PF00563 EAL domain DSUI_RS15200 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS15200 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS15205 PF01595 Cyclin M transmembrane N-terminal domain DSUI_RS15205 PF00571 CBS domain DSUI_RS15205 PF03471 Transporter associated domain DSUI_RS15215 PF00753 Metallo-beta-lactamase superfamily DSUI_RS15225 PF00034 Cytochrome c DSUI_RS15230 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSUI_RS15245 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS15245 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS15245 PF00563 EAL domain DSUI_RS15250 PF00510 Cytochrome c oxidase subunit III DSUI_RS15260 PF08406 CbbQ/NirQ/NorQ C-terminal DSUI_RS15260 PF07728 AAA domain (dynein-related subfamily) DSUI_RS15290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS15290 PF08447 PAS fold DSUI_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS15295 PF00672 HAMP domain DSUI_RS15295 PF02743 Cache domain DSUI_RS15300 PF00072 Response regulator receiver domain DSUI_RS15310 PF04055 Radical SAM superfamily DSUI_RS15310 PF13186 Iron-sulfur cluster-binding domain DSUI_RS15315 PF00849 RNA pseudouridylate synthase DSUI_RS15315 PF04287 tRNA pseudouridine synthase C DSUI_RS15320 PF08206 Ribonuclease B OB domain DSUI_RS15320 PF17876 Cold shock domain DSUI_RS15320 PF00773 RNB domain DSUI_RS15320 PF00575 S1 RNA binding domain DSUI_RS15320 PF08461 Ribonuclease R winged-helix domain DSUI_RS15335 PF00709 Adenylosuccinate synthetase DSUI_RS15340 PF13393 Histidyl-tRNA synthetase DSUI_RS15350 PF01145 SPFH domain / Band 7 family DSUI_RS15355 PF12221 Bacterial membrane protein N terminal DSUI_RS15355 PF01145 SPFH domain / Band 7 family DSUI_RS15360 PF01926 50S ribosome-binding GTPase DSUI_RS15360 PF13167 GTP-binding GTPase N-terminal DSUI_RS15360 PF16360 GTP-binding GTPase Middle Region DSUI_RS15365 PF17209 Hfq protein DSUI_RS15370 PF01926 50S ribosome-binding GTPase DSUI_RS15370 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DSUI_RS15375 PF13360 PQQ-like domain DSUI_RS15380 PF09976 Tetratricopeptide repeat-like domain DSUI_RS15385 PF03129 Anticodon binding domain DSUI_RS15385 PF13393 Histidyl-tRNA synthetase DSUI_RS15390 PF04551 GcpE protein DSUI_RS15395 PF13464 Domain of unknown function (DUF4115) DSUI_RS15405 PF04055 Radical SAM superfamily DSUI_RS15410 PF00334 Nucleoside diphosphate kinase DSUI_RS15425 PF01012 Electron transfer flavoprotein domain DSUI_RS15425 PF00766 Electron transfer flavoprotein FAD-binding domain DSUI_RS15430 PF01012 Electron transfer flavoprotein domain DSUI_RS15435 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS15435 PF00072 Response regulator receiver domain DSUI_RS15440 PF13492 GAF domain DSUI_RS15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS15440 PF02702 Osmosensitive K+ channel His kinase sensor domain DSUI_RS15440 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS15440 PF13493 Domain of unknown function (DUF4118) DSUI_RS15445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSUI_RS15450 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DSUI_RS15455 PF03480 Bacterial extracellular solute-binding protein, family 7 DSUI_RS15470 PF00375 Sodium:dicarboxylate symporter family DSUI_RS15475 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS15475 PF00989 PAS fold DSUI_RS15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS15480 PF00072 Response regulator receiver domain DSUI_RS15480 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS15485 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS15485 PF00563 EAL domain DSUI_RS15485 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS15490 PF07715 TonB-dependent Receptor Plug Domain DSUI_RS15490 PF00593 TonB dependent receptor DSUI_RS15500 PF00072 Response regulator receiver domain DSUI_RS15500 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS15505 PF11734 TilS substrate C-terminal domain DSUI_RS15505 PF09179 TilS substrate binding domain DSUI_RS15505 PF01171 PP-loop family DSUI_RS15510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DSUI_RS15550 PF03466 LysR substrate binding domain DSUI_RS15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS15555 PF00270 DEAD/DEAH box helicase DSUI_RS15555 PF00271 Helicase conserved C-terminal domain DSUI_RS15560 PF02321 Outer membrane efflux protein DSUI_RS15565 PF13533 Biotin-lipoyl like DSUI_RS15570 PF02687 FtsX-like permease family DSUI_RS15570 PF00005 ABC transporter DSUI_RS15570 PF12704 MacB-like periplasmic core domain DSUI_RS15575 PF02687 FtsX-like permease family DSUI_RS15575 PF12704 MacB-like periplasmic core domain DSUI_RS15575 PF00005 ABC transporter DSUI_RS15580 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS15580 PF00672 HAMP domain DSUI_RS15585 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS15585 PF00072 Response regulator receiver domain DSUI_RS15590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS15590 PF00529 HlyD membrane-fusion protein of T1SS DSUI_RS15595 PF00873 AcrB/AcrD/AcrF family DSUI_RS15600 PF02321 Outer membrane efflux protein DSUI_RS15610 PF01053 Cys/Met metabolism PLP-dependent enzyme DSUI_RS15615 PF00156 Phosphoribosyl transferase domain DSUI_RS15630 PF02875 Mur ligase family, glutamate ligase domain DSUI_RS15630 PF08245 Mur ligase middle domain DSUI_RS15635 PF17848 Acetyl-coA carboxylase zinc finger domain DSUI_RS15635 PF01039 Carboxyl transferase domain DSUI_RS15640 PF00290 Tryptophan synthase alpha chain DSUI_RS15645 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS15650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DSUI_RS15655 PF01416 tRNA pseudouridine synthase DSUI_RS15670 PF02774 Semialdehyde dehydrogenase, dimerisation domain DSUI_RS15670 PF01118 Semialdehyde dehydrogenase, NAD binding domain DSUI_RS15675 PF00180 Isocitrate/isopropylmalate dehydrogenase DSUI_RS15680 PF00694 Aconitase C-terminal domain DSUI_RS15690 PF00330 Aconitase family (aconitate hydratase) DSUI_RS15700 PF12832 MFS_1 like family DSUI_RS15705 PF01264 Chorismate synthase DSUI_RS15710 PF00849 RNA pseudouridylate synthase DSUI_RS15725 PF00291 Pyridoxal-phosphate dependent enzyme DSUI_RS15740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DSUI_RS15740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DSUI_RS15745 PF00501 AMP-binding enzyme DSUI_RS15745 PF13193 AMP-binding enzyme C-terminal domain DSUI_RS15755 PF12705 PD-(D/E)XK nuclease superfamily DSUI_RS15755 PF00580 UvrD/REP helicase N-terminal domain DSUI_RS15755 PF13361 UvrD-like helicase C-terminal domain DSUI_RS15765 PF00037 4Fe-4S binding domain DSUI_RS15765 PF11953 Domain of unknown function (DUF3470) DSUI_RS15770 PF00085 Thioredoxin DSUI_RS15775 PF07497 Rho termination factor, RNA-binding domain DSUI_RS15775 PF07498 Rho termination factor, N-terminal domain DSUI_RS15775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSUI_RS15780 PF01197 Ribosomal protein L31 DSUI_RS15795 PF00929 Exonuclease DSUI_RS15805 PF01329 Pterin 4 alpha carbinolamine dehydratase DSUI_RS15810 PF03193 RsgA GTPase DSUI_RS15815 PF05971 RNA methyltransferase DSUI_RS15820 PF08502 LeuA allosteric (dimerisation) domain DSUI_RS15820 PF00682 HMGL-like DSUI_RS15825 PF01037 Lrp/AsnC ligand binding domain DSUI_RS15830 PF08379 Bacterial transglutaminase-like N-terminal region DSUI_RS15830 PF01841 Transglutaminase-like superfamily DSUI_RS15835 PF04168 A predicted alpha-helical domain with a conserved ER motif. DSUI_RS15835 PF14403 Circularly permuted ATP-grasp type 2 DSUI_RS15845 PF04352 ProQ/FINO family DSUI_RS15845 PF17516 ProQ C-terminal domain DSUI_RS15860 PF04168 A predicted alpha-helical domain with a conserved ER motif. DSUI_RS15860 PF14403 Circularly permuted ATP-grasp type 2 DSUI_RS15865 PF14403 Circularly permuted ATP-grasp type 2 DSUI_RS15870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DSUI_RS15870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS15875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS15875 PF08447 PAS fold DSUI_RS15880 PF02803 Thiolase, C-terminal domain DSUI_RS15880 PF00108 Thiolase, N-terminal domain DSUI_RS15890 PF00293 NUDIX domain DSUI_RS15905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DSUI_RS15905 PF00117 Glutamine amidotransferase class-I DSUI_RS15910 PF04461 Protein of unknown function (DUF520) DSUI_RS15915 PF06865 Pyrimidine/purine nucleoside phosphorylase DSUI_RS15925 PF00764 Arginosuccinate synthase DSUI_RS15930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DSUI_RS15930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DSUI_RS15935 PF00202 Aminotransferase class-III DSUI_RS15940 PF13614 AAA domain DSUI_RS15955 PF01649 Ribosomal protein S20 DSUI_RS15960 PF03023 Lipid II flippase MurJ DSUI_RS15965 PF01161 Phosphatidylethanolamine-binding protein DSUI_RS15970 PF00155 Aminotransferase class I and II DSUI_RS15985 PF03030 Inorganic H+ pyrophosphatase DSUI_RS15990 PF00365 Phosphofructokinase DSUI_RS15995 PF05191 Adenylate kinase, active site lid DSUI_RS16000 PF02348 Cytidylyltransferase DSUI_RS16005 PF03966 Trm112p-like protein DSUI_RS16010 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DSUI_RS16015 PF02472 Biopolymer transport protein ExbD/TolR DSUI_RS16020 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS16025 PF02601 Exonuclease VII, large subunit DSUI_RS16025 PF13742 OB-fold nucleic acid binding domain DSUI_RS16030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DSUI_RS16030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DSUI_RS16040 PF07724 AAA domain (Cdc48 subfamily) DSUI_RS16040 PF06689 ClpX C4-type zinc finger DSUI_RS16040 PF10431 C-terminal, D2-small domain, of ClpB protein DSUI_RS16045 PF01810 LysE type translocator DSUI_RS16050 PF00484 Carbonic anhydrase DSUI_RS16065 PF06463 Molybdenum Cofactor Synthesis C DSUI_RS16065 PF04055 Radical SAM superfamily DSUI_RS16070 PF02634 FdhD/NarQ family DSUI_RS16075 PF01292 Prokaryotic cytochrome b561 DSUI_RS16080 PF13247 4Fe-4S dicluster domain DSUI_RS16080 PF09163 Formate dehydrogenase N, transmembrane DSUI_RS16085 PF01568 Molydopterin dinucleotide binding domain DSUI_RS16085 PF00384 Molybdopterin oxidoreductase DSUI_RS16085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSUI_RS16090 PF04216 Protein involved in formate dehydrogenase formation DSUI_RS16095 PF13188 PAS domain DSUI_RS16095 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS16095 PF00989 PAS fold DSUI_RS16095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS16095 PF13426 PAS domain DSUI_RS16100 PF00158 Sigma-54 interaction domain DSUI_RS16100 PF02954 Bacterial regulatory protein, Fis family DSUI_RS16100 PF00072 Response regulator receiver domain DSUI_RS16105 PF00072 Response regulator receiver domain DSUI_RS16110 PF01740 STAS domain DSUI_RS16120 PF04345 Chorismate lyase DSUI_RS16130 PF00849 RNA pseudouridylate synthase DSUI_RS16135 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DSUI_RS16140 PF03971 Monomeric isocitrate dehydrogenase DSUI_RS16145 PF00180 Isocitrate/isopropylmalate dehydrogenase DSUI_RS16150 PF00881 Nitroreductase family DSUI_RS16155 PF02254 TrkA-N domain DSUI_RS16155 PF00999 Sodium/hydrogen exchanger family DSUI_RS16160 PF08534 Redoxin DSUI_RS16175 PF00005 ABC transporter DSUI_RS16180 PF13237 4Fe-4S dicluster domain DSUI_RS16180 PF12801 4Fe-4S binding domain DSUI_RS16185 PF12800 4Fe-4S binding domain DSUI_RS16185 PF12838 4Fe-4S dicluster domain DSUI_RS16205 PF00034 Cytochrome c DSUI_RS16210 PF13473 Cupredoxin-like domain DSUI_RS16210 PF18793 Nitrous oxide reductase propeller repeat 2 DSUI_RS16210 PF18764 Nitrous oxide reductase propeller repeat DSUI_RS16220 PF02630 SCO1/SenC DSUI_RS16235 PF02472 Biopolymer transport protein ExbD/TolR DSUI_RS16240 PF01618 MotA/TolQ/ExbB proton channel family DSUI_RS16255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSUI_RS16260 PF10414 Sirohaem synthase dimerisation region DSUI_RS16260 PF14824 Sirohaem biosynthesis protein central DSUI_RS16260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSUI_RS16265 PF01040 UbiA prenyltransferase family DSUI_RS16275 PF02547 Queuosine biosynthesis protein DSUI_RS16280 PF01702 Queuine tRNA-ribosyltransferase DSUI_RS16285 PF02699 Preprotein translocase subunit DSUI_RS16290 PF07549 SecD/SecF GG Motif DSUI_RS16290 PF13721 SecD export protein N-terminal TM region DSUI_RS16290 PF02355 Protein export membrane protein DSUI_RS16295 PF02355 Protein export membrane protein DSUI_RS16295 PF07549 SecD/SecF GG Motif DSUI_RS16305 PF01322 Cytochrome C' DSUI_RS16315 PF08328 Adenylosuccinate lyase C-terminal DSUI_RS16315 PF00206 Lyase DSUI_RS16320 PF00043 Glutathione S-transferase, C-terminal domain DSUI_RS16320 PF13417 Glutathione S-transferase, N-terminal domain DSUI_RS16330 PF00563 EAL domain DSUI_RS16330 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS16330 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS16360 PF01063 Amino-transferase class IV DSUI_RS16370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSUI_RS16380 PF00561 alpha/beta hydrolase fold DSUI_RS16385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DSUI_RS16385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DSUI_RS16385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DSUI_RS16385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DSUI_RS16390 PF00563 EAL domain DSUI_RS16390 PF08668 HDOD domain DSUI_RS16395 PF08668 HDOD domain DSUI_RS16395 PF00563 EAL domain DSUI_RS16425 PF13545 Crp-like helix-turn-helix domain DSUI_RS16425 PF00027 Cyclic nucleotide-binding domain DSUI_RS16445 PF02190 ATP-dependent protease La (LON) substrate-binding domain DSUI_RS16445 PF00004 ATPase family associated with various cellular activities (AAA) DSUI_RS16445 PF05362 Lon protease (S16) C-terminal proteolytic domain DSUI_RS16495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DSUI_RS16495 PF02272 DHHA1 domain DSUI_RS16495 PF01411 tRNA synthetases class II (A) DSUI_RS16505 PF03009 Glycerophosphoryl diester phosphodiesterase family DSUI_RS16510 PF13416 Bacterial extracellular solute-binding protein DSUI_RS16520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSUI_RS16520 PF02770 Acyl-CoA dehydrogenase, middle domain DSUI_RS16520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSUI_RS16530 PF00248 Aldo/keto reductase family DSUI_RS16540 PF02690 Na+/Pi-cotransporter DSUI_RS16550 PF00155 Aminotransferase class I and II DSUI_RS16565 PF01008 Initiation factor 2 subunit family DSUI_RS16570 PF00596 Class II Aldolase and Adducin N-terminal domain DSUI_RS16585 PF13545 Crp-like helix-turn-helix domain DSUI_RS16585 PF00027 Cyclic nucleotide-binding domain DSUI_RS16590 PF02080 TrkA-C domain DSUI_RS16590 PF02254 TrkA-N domain DSUI_RS16590 PF00999 Sodium/hydrogen exchanger family DSUI_RS16600 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS16600 PF00072 Response regulator receiver domain DSUI_RS16605 PF00989 PAS fold DSUI_RS16605 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS16605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS16615 PF00378 Enoyl-CoA hydratase/isomerase DSUI_RS16625 PF07722 Peptidase C26 DSUI_RS16630 PF04107 Glutamate-cysteine ligase family 2(GCS2) DSUI_RS16640 PF00689 Cation transporting ATPase, C-terminus DSUI_RS16640 PF00690 Cation transporter/ATPase, N-terminus DSUI_RS16645 PF07690 Major Facilitator Superfamily DSUI_RS16650 PF03466 LysR substrate binding domain DSUI_RS16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS16655 PF00665 Integrase core domain DSUI_RS16655 PF13936 Helix-turn-helix domain DSUI_RS16665 PF01523 Putative modulator of DNA gyrase DSUI_RS16670 PF00795 Carbon-nitrogen hydrolase DSUI_RS16680 PF03710 Glutamate-ammonia ligase adenylyltransferase DSUI_RS16680 PF08335 GlnD PII-uridylyltransferase DSUI_RS16690 PF00271 Helicase conserved C-terminal domain DSUI_RS16690 PF00270 DEAD/DEAH box helicase DSUI_RS16695 PF05175 Methyltransferase small domain DSUI_RS16725 PF02754 Cysteine-rich domain DSUI_RS16725 PF13183 4Fe-4S dicluster domain DSUI_RS16730 PF01565 FAD binding domain DSUI_RS16735 PF01565 FAD binding domain DSUI_RS16735 PF02913 FAD linked oxidases, C-terminal domain DSUI_RS16750 PF01925 Sulfite exporter TauE/SafE DSUI_RS16765 PF05161 MOFRL family DSUI_RS16765 PF13660 Domain of unknown function (DUF4147) DSUI_RS16770 PF01814 Hemerythrin HHE cation binding domain DSUI_RS16775 PF01261 Xylose isomerase-like TIM barrel DSUI_RS16780 PF01923 Cobalamin adenosyltransferase DSUI_RS16785 PF01042 Endoribonuclease L-PSP DSUI_RS16790 PF03466 LysR substrate binding domain DSUI_RS16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS16795 PF00857 Isochorismatase family DSUI_RS16800 PF12833 Helix-turn-helix domain DSUI_RS16800 PF01965 DJ-1/PfpI family DSUI_RS16805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS16805 PF00529 HlyD membrane-fusion protein of T1SS DSUI_RS16810 PF00873 AcrB/AcrD/AcrF family DSUI_RS16830 PF09857 Putative toxin of bacterial toxin-antitoxin pair DSUI_RS16840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DSUI_RS16840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DSUI_RS16845 PF00563 EAL domain DSUI_RS16845 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS16845 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS16850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DSUI_RS16850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DSUI_RS16855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS16855 PF00672 HAMP domain DSUI_RS16855 PF02743 Cache domain DSUI_RS16865 PF00873 AcrB/AcrD/AcrF family DSUI_RS16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSUI_RS16875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSUI_RS16880 PF00793 DAHP synthetase I family DSUI_RS16890 PF01040 UbiA prenyltransferase family DSUI_RS16895 PF08521 Two-component sensor kinase N-terminal DSUI_RS16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS16895 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS16900 PF00072 Response regulator receiver domain DSUI_RS16900 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS16905 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS16905 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS16905 PF00563 EAL domain DSUI_RS16910 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DSUI_RS16910 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DSUI_RS16915 PF07690 Major Facilitator Superfamily DSUI_RS16920 PF01467 Cytidylyltransferase-like DSUI_RS16925 PF01545 Cation efflux family DSUI_RS16935 PF01966 HD domain DSUI_RS16945 PF02705 K+ potassium transporter DSUI_RS16950 PF03775 Septum formation inhibitor MinC, C-terminal domain DSUI_RS16950 PF05209 Septum formation inhibitor MinC, N-terminal domain DSUI_RS16955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DSUI_RS16960 PF03776 Septum formation topological specificity factor MinE DSUI_RS16975 PF00528 Binding-protein-dependent transport system inner membrane component DSUI_RS16980 PF00005 ABC transporter DSUI_RS16985 PF02743 Cache domain DSUI_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS16985 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS16995 PF00072 Response regulator receiver domain DSUI_RS16995 PF00158 Sigma-54 interaction domain DSUI_RS16995 PF02954 Bacterial regulatory protein, Fis family DSUI_RS17005 PF00072 Response regulator receiver domain DSUI_RS17005 PF00196 Bacterial regulatory proteins, luxR family DSUI_RS17015 PF13426 PAS domain DSUI_RS17015 PF08447 PAS fold DSUI_RS17015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS17020 PF00072 Response regulator receiver domain DSUI_RS17030 PF01627 Hpt domain DSUI_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17030 PF02895 Signal transducing histidine kinase, homodimeric domain DSUI_RS17030 PF09078 CheY binding DSUI_RS17030 PF01584 CheW-like domain DSUI_RS17035 PF00672 HAMP domain DSUI_RS17035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS17035 PF02203 Tar ligand binding domain homologue DSUI_RS17040 PF01584 CheW-like domain DSUI_RS17045 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17055 PF00436 Single-strand binding protein family DSUI_RS17060 PF07690 Major Facilitator Superfamily DSUI_RS17065 PF10415 Fumarase C C-terminus DSUI_RS17065 PF00206 Lyase DSUI_RS17070 PF00375 Sodium:dicarboxylate symporter family DSUI_RS17080 PF01925 Sulfite exporter TauE/SafE DSUI_RS17085 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17085 PF02743 Cache domain DSUI_RS17090 PF00158 Sigma-54 interaction domain DSUI_RS17090 PF02954 Bacterial regulatory protein, Fis family DSUI_RS17090 PF00072 Response regulator receiver domain DSUI_RS17095 PF07963 Prokaryotic N-terminal methylation motif DSUI_RS17095 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DSUI_RS17120 PF05567 Neisseria PilC beta-propeller domain DSUI_RS17130 PF02401 LytB protein DSUI_RS17135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSUI_RS17140 PF00174 Oxidoreductase molybdopterin binding domain DSUI_RS17145 PF01252 Signal peptidase (SPase) II DSUI_RS17150 PF06827 Zinc finger found in FPG and IleRS DSUI_RS17150 PF00133 tRNA synthetases class I (I, L, M and V) DSUI_RS17150 PF08264 Anticodon-binding domain of tRNA DSUI_RS17155 PF01687 Riboflavin kinase DSUI_RS17155 PF06574 FAD synthetase DSUI_RS17160 PF01520 N-acetylmuramoyl-L-alanine amidase DSUI_RS17160 PF11741 AMIN domain DSUI_RS17165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DSUI_RS17170 PF08331 Domain of unknown function (DUF1730) DSUI_RS17180 PF00581 Rhodanese-like domain DSUI_RS17200 PF02609 Exonuclease VII small subunit DSUI_RS17205 PF00348 Polyprenyl synthetase DSUI_RS17210 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DSUI_RS17210 PF02780 Transketolase, C-terminal domain DSUI_RS17210 PF02779 Transketolase, pyrimidine binding domain DSUI_RS17215 PF02649 Type I GTP cyclohydrolase folE2 DSUI_RS17220 PF01245 Ribosomal protein L19 DSUI_RS17225 PF01746 tRNA (Guanine-1)-methyltransferase DSUI_RS17230 PF01782 RimM N-terminal domain DSUI_RS17230 PF05239 PRC-barrel domain DSUI_RS17235 PF00886 Ribosomal protein S16 DSUI_RS17245 PF03631 Virulence factor BrkB DSUI_RS17255 PF00682 HMGL-like DSUI_RS17255 PF08502 LeuA allosteric (dimerisation) domain DSUI_RS17260 PF00873 AcrB/AcrD/AcrF family DSUI_RS17275 PF00486 Transcriptional regulatory protein, C terminal DSUI_RS17275 PF00072 Response regulator receiver domain DSUI_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17280 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17285 PF01066 CDP-alcohol phosphatidyltransferase DSUI_RS17290 PF02666 Phosphatidylserine decarboxylase DSUI_RS17295 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DSUI_RS17295 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DSUI_RS17300 PF10369 Small subunit of acetolactate synthase DSUI_RS17305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSUI_RS17305 PF00205 Thiamine pyrophosphate enzyme, central domain DSUI_RS17305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSUI_RS17335 PF03739 Lipopolysaccharide export system permease LptF/LptG DSUI_RS17340 PF00883 Cytosol aminopeptidase family, catalytic domain DSUI_RS17340 PF02789 Cytosol aminopeptidase family, N-terminal domain DSUI_RS17355 PF00133 tRNA synthetases class I (I, L, M and V) DSUI_RS17355 PF10458 Valyl tRNA synthetase tRNA binding arm DSUI_RS17355 PF08264 Anticodon-binding domain of tRNA DSUI_RS17375 PF00535 Glycosyl transferase family 2 DSUI_RS17380 PF00535 Glycosyl transferase family 2 DSUI_RS17450 PF00672 HAMP domain DSUI_RS17450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS17450 PF02203 Tar ligand binding domain homologue DSUI_RS17460 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17460 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17460 PF00563 EAL domain DSUI_RS17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSUI_RS17465 PF03459 TOBE domain DSUI_RS17480 PF00563 EAL domain DSUI_RS17480 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17480 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17485 PF00563 EAL domain DSUI_RS17485 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17485 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17500 PF00072 Response regulator receiver domain DSUI_RS17500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS17500 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17500 PF00672 HAMP domain DSUI_RS17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17500 PF01627 Hpt domain DSUI_RS17505 PF00072 Response regulator receiver domain DSUI_RS17515 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DSUI_RS17515 PF01464 Transglycosylase SLT domain DSUI_RS17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17520 PF00672 HAMP domain DSUI_RS17520 PF00072 Response regulator receiver domain DSUI_RS17520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS17520 PF01627 Hpt domain DSUI_RS17520 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17525 PF00563 EAL domain DSUI_RS17525 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17525 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17550 PF07963 Prokaryotic N-terminal methylation motif DSUI_RS17550 PF00114 Pilin (bacterial filament) DSUI_RS17585 PF00069 Protein kinase domain DSUI_RS17585 PF03793 PASTA domain DSUI_RS17590 PF01590 GAF domain DSUI_RS17590 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17590 PF08446 PAS fold DSUI_RS17590 PF00360 Phytochrome region DSUI_RS17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17625 PF02120 Flagellar hook-length control protein FliK DSUI_RS17640 PF00589 Phage integrase family DSUI_RS17640 PF13356 Arm DNA-binding domain DSUI_RS17670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSUI_RS17670 PF13426 PAS domain DSUI_RS17670 PF08447 PAS fold DSUI_RS17675 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17675 PF00672 HAMP domain DSUI_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17675 PF01627 Hpt domain DSUI_RS17675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSUI_RS17675 PF00072 Response regulator receiver domain DSUI_RS17690 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17690 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17690 PF00563 EAL domain DSUI_RS17695 PF13847 Methyltransferase domain DSUI_RS17695 PF03551 Transcriptional regulator PadR-like family DSUI_RS17700 PF02630 SCO1/SenC DSUI_RS17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17710 PF00072 Response regulator receiver domain DSUI_RS17710 PF01627 Hpt domain DSUI_RS17710 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17725 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17725 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17725 PF00563 EAL domain DSUI_RS17730 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17730 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17730 PF00563 EAL domain DSUI_RS17735 PF01569 PAP2 superfamily DSUI_RS17740 PF08447 PAS fold DSUI_RS17740 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17740 PF00563 EAL domain DSUI_RS17740 PF08448 PAS fold DSUI_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17785 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17785 PF00672 HAMP domain DSUI_RS17795 PF01627 Hpt domain DSUI_RS17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17795 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17795 PF00672 HAMP domain DSUI_RS17795 PF17149 Periplasmic sensor domain found in signal transduction proteins DSUI_RS17795 PF00072 Response regulator receiver domain DSUI_RS17800 PF08448 PAS fold DSUI_RS17800 PF00563 EAL domain DSUI_RS17800 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17805 PF00425 chorismate binding enzyme DSUI_RS17810 PF00989 PAS fold DSUI_RS17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17810 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17815 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS17815 PF00989 PAS fold DSUI_RS17820 PF00072 Response regulator receiver domain DSUI_RS17820 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17825 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DSUI_RS17840 PF00563 EAL domain DSUI_RS17840 PF13188 PAS domain DSUI_RS17840 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17840 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17845 PF00563 EAL domain DSUI_RS17845 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS17845 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS17845 PF13188 PAS domain DSUI_RS17855 PF02954 Bacterial regulatory protein, Fis family DSUI_RS17855 PF00158 Sigma-54 interaction domain DSUI_RS17855 PF00072 Response regulator receiver domain DSUI_RS17860 PF02954 Bacterial regulatory protein, Fis family DSUI_RS17860 PF00072 Response regulator receiver domain DSUI_RS17860 PF00158 Sigma-54 interaction domain DSUI_RS17870 PF14376 Haem-binding domain DSUI_RS17870 PF00034 Cytochrome c DSUI_RS17870 PF03150 Di-haem cytochrome c peroxidase DSUI_RS17880 PF16473 3' exoribonuclease, RNase T-like DSUI_RS17915 PF00535 Glycosyl transferase family 2 DSUI_RS17935 PF00589 Phage integrase family DSUI_RS17940 PF06463 Molybdenum Cofactor Synthesis C DSUI_RS17940 PF04055 Radical SAM superfamily DSUI_RS17945 PF02416 mttA/Hcf106 family DSUI_RS17950 PF13435 Cytochrome c554 and c-prime DSUI_RS17955 PF00158 Sigma-54 interaction domain DSUI_RS17955 PF02954 Bacterial regulatory protein, Fis family DSUI_RS17955 PF00072 Response regulator receiver domain DSUI_RS17995 PF00444 Ribosomal protein L36 DSUI_RS18020 PF00565 Staphylococcal nuclease homologue DSUI_RS18085 PF00376 MerR family regulatory protein DSUI_RS18085 PF09278 MerR, DNA binding DSUI_RS18090 PF00672 HAMP domain DSUI_RS18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS18090 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS18105 PF00460 Flagella basal body rod protein DSUI_RS18110 PF11426 Tn7 transposition regulator TnsC DSUI_RS18110 PF13401 AAA domain DSUI_RS18160 PF03600 Citrate transporter DSUI_RS18165 PF00563 EAL domain DSUI_RS18165 PF00990 Diguanylate cyclase, GGDEF domain DSUI_RS18165 PF03707 Bacterial signalling protein N terminal repeat DSUI_RS18175 PF03544 Gram-negative bacterial TonB protein C-terminal DSUI_RS18180 PF01713 Smr domain DSUI_RS18220 PF00565 Staphylococcal nuclease homologue DSUI_RS18260 PF13676 TIR domain DSUI_RS18315 PF04336 Acyl carrier protein phosphodiesterase DSUI_RS18320 PF00512 His Kinase A (phospho-acceptor) domain DSUI_RS18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSUI_RS18325 PF01555 DNA methylase DSUI_RS18375 PF18273 Type III R-M EcoP15I C-terminal domain DSUI_RS18375 PF01555 DNA methylase DSUI_RS18395 PF00072 Response regulator receiver domain