locus-tag	class	description
ABAZ39_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABAZ39_RS00010	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ABAZ39_RS00015	COG3842	ATPase activity
ABAZ39_RS00030	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABAZ39_RS00035	COG1177	transmembrane transport
ABAZ39_RS00050	COG2132	Multicopper oxidase
ABAZ39_RS00070	COG3278	Belongs to the heme-copper respiratory oxidase family
ABAZ39_RS00100	COG2217	Heavy metal translocating P-type atpase
ABAZ39_RS00105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS00115	COG0280	phosphate acetyltransferase
ABAZ39_RS00115	COG0281	malic enzyme
ABAZ39_RS00120	COG5002	protein histidine kinase activity
ABAZ39_RS00125	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABAZ39_RS00130	COG0573	inorganic phosphate transmembrane transporter activity
ABAZ39_RS00140	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABAZ39_RS00150	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS00165	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABAZ39_RS00175	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABAZ39_RS00185	COG0756	dUTP diphosphatase activity
ABAZ39_RS00190	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABAZ39_RS00195	COG2204	response regulator
ABAZ39_RS00200	COG1278	Cold shock
ABAZ39_RS00205	COG0784	Response regulator, receiver
ABAZ39_RS00205	COG2205	protein histidine kinase activity
ABAZ39_RS00205	COG5002	protein histidine kinase activity
ABAZ39_RS00210	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABAZ39_RS00215	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABAZ39_RS00215	COG1321	iron dependent repressor
ABAZ39_RS00220	COG1121	(ABC) transporter
ABAZ39_RS00225	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABAZ39_RS00260	COG2202	Pas domain
ABAZ39_RS00260	COG2205	protein histidine kinase activity
ABAZ39_RS00280	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABAZ39_RS00285	COG1253	flavin adenine dinucleotide binding
ABAZ39_RS00300	COG0477	Major facilitator Superfamily
ABAZ39_RS00305	COG0583	DNA-binding transcription factor activity
ABAZ39_RS00310	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABAZ39_RS00330	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
ABAZ39_RS00350	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABAZ39_RS00355	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABAZ39_RS00360	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABAZ39_RS00375	COG0784	Response regulator, receiver
ABAZ39_RS00375	COG3437	response regulator, receiver
ABAZ39_RS00385	COG0583	DNA-binding transcription factor activity
ABAZ39_RS00395	COG0481	GTPase activity
ABAZ39_RS00400	COG0297	glycogen (starch) synthase activity
ABAZ39_RS00405	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ABAZ39_RS00410	COG0004	ammonium transporteR
ABAZ39_RS00435	COG3806	Anti-sigma factor
ABAZ39_RS00440	COG1595	DNA-templated transcription, initiation
ABAZ39_RS00450	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABAZ39_RS00465	COG0137	argininosuccinate synthase activity
ABAZ39_RS00485	COG2897	thiosulfate sulfurtransferase activity
ABAZ39_RS00490	COG3339	Conserved Protein
ABAZ39_RS00495	COG0697	spore germination
ABAZ39_RS00500	COG4235	cytochrome complex assembly
ABAZ39_RS00505	COG3088	subunit of a heme lyase
ABAZ39_RS00510	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABAZ39_RS00515	COG1138	Cytochrome C-type biogenesis protein
ABAZ39_RS00520	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
ABAZ39_RS00530	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABAZ39_RS00560	COG2985	domain, Protein
ABAZ39_RS00565	COG2985	domain, Protein
ABAZ39_RS00570	COG4133	protoheme IX ABC transporter activity
ABAZ39_RS00575	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABAZ39_RS00580	COG1715	Restriction endonuclease
ABAZ39_RS00595	COG1872	DUF167
ABAZ39_RS00600	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABAZ39_RS00605	COG0598	Magnesium transport protein CorA
ABAZ39_RS00615	COG2154	pterin-4-alpha-carbinolamine dehydratase
ABAZ39_RS00625	COG1573	uracil-dna glycosylase
ABAZ39_RS00630	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABAZ39_RS00635	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABAZ39_RS00640	COG3001	Fructosamine kinase
ABAZ39_RS00650	COG0583	DNA-binding transcription factor activity
ABAZ39_RS00660	COG1074	ATP-dependent DNA helicase activity
ABAZ39_RS00665	COG2887	Belongs to the helicase family. UvrD subfamily
ABAZ39_RS00670	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABAZ39_RS00710	COG1252	NADH dehydrogenase
ABAZ39_RS00715	COG2205	protein histidine kinase activity
ABAZ39_RS00720	COG5002	protein histidine kinase activity
ABAZ39_RS00720	COG2205	protein histidine kinase activity
ABAZ39_RS00720	COG0784	Response regulator, receiver
ABAZ39_RS00725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS00730	COG0133	tryptophan synthase activity
ABAZ39_RS00740	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABAZ39_RS00745	COG0285	dihydrofolate synthase activity
ABAZ39_RS00760	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS00780	COG0302	gtp cyclohydrolase
ABAZ39_RS00810	COG1278	Cold shock
ABAZ39_RS00815	COG0033	Phosphoglucomutase
ABAZ39_RS00820	COG0412	Dienelactone hydrolase
ABAZ39_RS00830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABAZ39_RS00860	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABAZ39_RS00865	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABAZ39_RS00870	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABAZ39_RS00870	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABAZ39_RS00895	COG0514	ATP-dependent DNA helicase (RecQ)
ABAZ39_RS00900	COG0494	nUDIX hydrolase
ABAZ39_RS00910	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABAZ39_RS00915	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABAZ39_RS00920	COG0653	protein targeting
ABAZ39_RS00925	COG1970	mechanosensitive ion channel activity
ABAZ39_RS00930	COG0513	Belongs to the DEAD box helicase family
ABAZ39_RS00935	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ABAZ39_RS00955	COG4106	trans-aconitate 2-methyltransferase activity
ABAZ39_RS00960	COG1987	bacterial-type flagellum assembly
ABAZ39_RS00965	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABAZ39_RS00970	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABAZ39_RS00975	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABAZ39_RS00995	COG3162	membrane
ABAZ39_RS01030	COG1012	belongs to the aldehyde dehydrogenase family
ABAZ39_RS01080	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABAZ39_RS01085	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ABAZ39_RS01085	COG2755	lipolytic protein G-D-S-L family
ABAZ39_RS01110	COG0071	Belongs to the small heat shock protein (HSP20) family
ABAZ39_RS01120	COG0463	Glycosyl transferase, family 2
ABAZ39_RS01145	COG0303	'Molybdopterin
ABAZ39_RS01150	COG1741	Belongs to the pirin family
ABAZ39_RS01170	COG0405	Gamma-glutamyltransferase
ABAZ39_RS01185	COG0539	negative regulation of cytoplasmic translation
ABAZ39_RS01195	COG0776	regulation of translation
ABAZ39_RS01205	COG2423	ornithine cyclodeaminase activity
ABAZ39_RS01225	COG0135	phosphoribosylanthranilate isomerase activity
ABAZ39_RS01235	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABAZ39_RS01240	COG1178	ABC-type Fe3 transport system permease component
ABAZ39_RS01245	COG1741	Belongs to the pirin family
ABAZ39_RS01250	COG1840	ABC-type Fe3 transport system, periplasmic component
ABAZ39_RS01285	COG0271	Belongs to the BolA IbaG family
ABAZ39_RS01300	COG0517	IMP dehydrogenase activity
ABAZ39_RS01305	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABAZ39_RS01320	COG4974	Belongs to the 'phage' integrase family
ABAZ39_RS01325	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABAZ39_RS01340	COG0825	malonyl-CoA metabolic process
ABAZ39_RS01355	COG0598	Magnesium transport protein CorA
ABAZ39_RS01365	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABAZ39_RS01380	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABAZ39_RS01385	COG0706	membrane insertase activity
ABAZ39_RS01395	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABAZ39_RS01435	COG0438	transferase activity, transferring glycosyl groups
ABAZ39_RS01450	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABAZ39_RS01460	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABAZ39_RS01470	COG0489	protein tyrosine kinase activity
ABAZ39_RS01470	COG3206	protein involved in exopolysaccharide biosynthesis
ABAZ39_RS01485	COG0697	spore germination
ABAZ39_RS01490	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ABAZ39_RS01500	COG1131	(ABC) transporter
ABAZ39_RS01510	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAZ39_RS01525	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
ABAZ39_RS01545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABAZ39_RS01585	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABAZ39_RS01590	COG0228	four-way junction DNA binding
ABAZ39_RS01595	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABAZ39_RS01605	COG0335	large ribosomal subunit rRNA binding
ABAZ39_RS01620	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABAZ39_RS01625	COG2378	regulation of single-species biofilm formation
ABAZ39_RS01645	COG0101	tRNA pseudouridine synthase activity
ABAZ39_RS01650	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABAZ39_RS01655	COG0242	peptide deformylase activity
ABAZ39_RS01665	COG1278	Cold shock
ABAZ39_RS01670	COG1322	Protein conserved in bacteria
ABAZ39_RS01685	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS01700	COG0156	8-amino-7-oxononanoate synthase activity
ABAZ39_RS01710	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABAZ39_RS01715	COG0625	glutathione transferase activity
ABAZ39_RS01720	COG5001	Diguanylate cyclase
ABAZ39_RS01750	COG0583	DNA-binding transcription factor activity
ABAZ39_RS01760	COG2814	Major facilitator Superfamily
ABAZ39_RS01765	COG1024	Enoyl-CoA hydratase
ABAZ39_RS01775	COG0601	transmembrane transport
ABAZ39_RS01780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS01790	COG0625	glutathione transferase activity
ABAZ39_RS01795	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABAZ39_RS01825	COG0587	DNA-directed DNA polymerase activity
ABAZ39_RS01845	COG2358	TRAP transporter, solute receptor (TAXI family
ABAZ39_RS01860	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABAZ39_RS01885	COG4172	Belongs to the ABC transporter superfamily
ABAZ39_RS01890	COG4239	(ABC) transporter, permease
ABAZ39_RS01895	COG4174	ABC transporter (Permease)
ABAZ39_RS01900	COG4166	transmembrane transport
ABAZ39_RS01905	COG4166	transmembrane transport
ABAZ39_RS01935	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABAZ39_RS01940	COG3474	cytochrome
ABAZ39_RS01950	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABAZ39_RS01960	COG0126	phosphoglycerate kinase activity
ABAZ39_RS01980	COG2202	Pas domain
ABAZ39_RS01980	COG3920	Histidine kinase
ABAZ39_RS01990	COG4106	trans-aconitate 2-methyltransferase activity
ABAZ39_RS02000	COG4191	Histidine kinase
ABAZ39_RS02020	COG0596	Alpha beta hydrolase
ABAZ39_RS02030	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAZ39_RS02035	COG4974	Belongs to the 'phage' integrase family
ABAZ39_RS02045	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABAZ39_RS02065	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABAZ39_RS02075	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABAZ39_RS02095	COG1051	belongs to the nudix hydrolase family
ABAZ39_RS02105	COG0793	Belongs to the peptidase S41A family
ABAZ39_RS02115	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABAZ39_RS02120	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABAZ39_RS02125	COG0799	negative regulation of ribosome biogenesis
ABAZ39_RS02135	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABAZ39_RS02140	COG2010	Cytochrome c
ABAZ39_RS02160	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABAZ39_RS02170	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABAZ39_RS02175	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABAZ39_RS02180	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABAZ39_RS02220	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABAZ39_RS02225	COG0602	queuosine metabolic process
ABAZ39_RS02255	COG0463	Glycosyl transferase, family 2
ABAZ39_RS02265	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABAZ39_RS02280	COG0723	plastoquinol--plastocyanin reductase activity
ABAZ39_RS02295	COG1131	(ABC) transporter
ABAZ39_RS02345	COG1116	anion transmembrane transporter activity
ABAZ39_RS02385	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ABAZ39_RS02395	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABAZ39_RS02400	COG0784	Response regulator, receiver
ABAZ39_RS02400	COG2205	protein histidine kinase activity
ABAZ39_RS02410	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS02415	COG2766	serine protein kinase
ABAZ39_RS02420	COG2718	Belongs to the UPF0229 family
ABAZ39_RS02425	COG2719	SpoVR family
ABAZ39_RS02445	COG1643	Atp-dependent helicase
ABAZ39_RS02450	COG1116	anion transmembrane transporter activity
ABAZ39_RS02470	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS02495	COG0330	HflC and HflK could
ABAZ39_RS02500	COG0628	permease
ABAZ39_RS02515	COG3180	Ammonia monooxygenase
ABAZ39_RS02520	COG2988	succinylglutamate desuccinylase activity
ABAZ39_RS02570	COG2205	protein histidine kinase activity
ABAZ39_RS02580	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABAZ39_RS02590	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
ABAZ39_RS02620	COG2197	response regulator
ABAZ39_RS02625	COG2197	response regulator
ABAZ39_RS02630	COG0210	DNA helicase
ABAZ39_RS02645	COG2264	protein methyltransferase activity
ABAZ39_RS02655	COG0006	proline dipeptidase activity
ABAZ39_RS02655	COG0006	proline dipeptidase activity
ABAZ39_RS02660	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS02675	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABAZ39_RS02680	COG0497	DNA recombination
ABAZ39_RS02695	COG0840	transmembrane signaling receptor activity
ABAZ39_RS02705	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABAZ39_RS02720	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABAZ39_RS02725	COG0849	cell division
ABAZ39_RS02730	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABAZ39_RS02735	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABAZ39_RS02740	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABAZ39_RS02745	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABAZ39_RS02755	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABAZ39_RS02770	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABAZ39_RS02780	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABAZ39_RS02800	COG2001	Belongs to the MraZ family
ABAZ39_RS02815	COG0488	(ABC) transporter
ABAZ39_RS02820	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABAZ39_RS02835	COG0277	FAD linked oxidase domain protein
ABAZ39_RS02840	COG2084	Dehydrogenase
ABAZ39_RS02855	COG0784	Response regulator, receiver
ABAZ39_RS02855	COG4191	Histidine kinase
ABAZ39_RS02880	COG0142	geranyltranstransferase activity
ABAZ39_RS02890	COG2890	protein-(glutamine-N5) methyltransferase activity
ABAZ39_RS02910	COG0752	glycyl-tRNA synthetase alpha subunit
ABAZ39_RS02915	COG0751	glycine-tRNA ligase activity
ABAZ39_RS02920	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABAZ39_RS02925	COG1346	cytolysis
ABAZ39_RS02930	COG1380	Effector of murein hydrolase LrgA
ABAZ39_RS02935	COG1073	alpha beta
ABAZ39_RS02970	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABAZ39_RS02980	COG2205	protein histidine kinase activity
ABAZ39_RS03010	COG3409	Peptidoglycan-binding domain 1 protein
ABAZ39_RS03010	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABAZ39_RS03015	COG3108	Peptidase M15
ABAZ39_RS03025	COG1396	sequence-specific DNA binding
ABAZ39_RS03030	COG0840	transmembrane signaling receptor activity
ABAZ39_RS03045	COG1230	cation diffusion facilitator family transporter
ABAZ39_RS03065	COG0511	ligase activity, forming carbon-carbon bonds
ABAZ39_RS03070	COG0439	Biotin carboxylase
ABAZ39_RS03075	COG3719	Belongs to the RNase T2 family
ABAZ39_RS03105	COG1280	lysine exporter protein (LysE YggA)
ABAZ39_RS03115	COG1663	tetraacyldisaccharide 4'-kinase activity
ABAZ39_RS03120	COG1519	Transferase
ABAZ39_RS03140	COG1597	lipid kinase activity
ABAZ39_RS03155	COG0312	modulator of DNA gyrase
ABAZ39_RS03170	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABAZ39_RS03180	COG2264	protein methyltransferase activity
ABAZ39_RS03195	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABAZ39_RS03205	COG0436	Aminotransferase
ABAZ39_RS03235	COG1530	ribonuclease E activity
ABAZ39_RS03240	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABAZ39_RS03245	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ABAZ39_RS03285	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAZ39_RS03320	COG1309	transcriptional regulator
ABAZ39_RS03325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAZ39_RS03335	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABAZ39_RS03345	COG0673	inositol 2-dehydrogenase activity
ABAZ39_RS03375	COG0411	ABC transporter
ABAZ39_RS03385	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABAZ39_RS03390	COG0840	transmembrane signaling receptor activity
ABAZ39_RS03390	COG2972	Histidine kinase
ABAZ39_RS03400	COG1940	carbohydrate kinase activity
ABAZ39_RS03410	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABAZ39_RS03510	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABAZ39_RS03515	COG0081	regulation of translation
ABAZ39_RS03520	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABAZ39_RS03525	COG0222	ribosome binding
ABAZ39_RS03530	COG0085	RNA polymerase activity
ABAZ39_RS03535	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABAZ39_RS03550	COG0049	tRNA binding
ABAZ39_RS03560	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABAZ39_RS03565	COG0051	transcription antitermination factor activity, RNA binding
ABAZ39_RS03575	COG0088	Forms part of the polypeptide exit tunnel
ABAZ39_RS03580	COG0089	rRNA binding
ABAZ39_RS03585	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABAZ39_RS03590	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABAZ39_RS03595	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABAZ39_RS03600	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABAZ39_RS03605	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABAZ39_RS03610	COG0255	Belongs to the universal ribosomal protein uL29 family
ABAZ39_RS03615	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABAZ39_RS03625	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABAZ39_RS03635	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABAZ39_RS03640	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABAZ39_RS03645	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABAZ39_RS03660	COG1841	ribosomal large subunit assembly
ABAZ39_RS03665	COG0200	Binds to the 23S rRNA
ABAZ39_RS03670	COG0201	protein transport
ABAZ39_RS03675	COG0563	adenylate kinase activity
ABAZ39_RS03680	COG2186	Transcriptional regulator
ABAZ39_RS03695	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ABAZ39_RS03715	COG0071	Belongs to the small heat shock protein (HSP20) family
ABAZ39_RS03725	COG0254	rRNA binding
ABAZ39_RS03730	COG1132	(ABC) transporter
ABAZ39_RS03740	COG0500	methyltransferase
ABAZ39_RS03765	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ABAZ39_RS03810	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ABAZ39_RS03820	COG4786	Flagellar basal body rod
ABAZ39_RS03825	COG4786	Flagellar basal body rod
ABAZ39_RS03865	COG1360	Flagellar Motor Protein
ABAZ39_RS03880	COG1338	Plays a role in the flagellum-specific transport system
ABAZ39_RS03895	COG2257	FlhB HrpN YscU SpaS Family
ABAZ39_RS03900	COG1815	bacterial-type flagellum-dependent cell motility
ABAZ39_RS03905	COG1558	bacterial-type flagellum-dependent cell motility
ABAZ39_RS03910	COG1677	Flagellar hook-basal body complex protein FliE
ABAZ39_RS03915	COG1987	bacterial-type flagellum assembly
ABAZ39_RS03920	COG1684	flagellar biosynthetic protein fliR
ABAZ39_RS03925	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABAZ39_RS03945	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABAZ39_RS03960	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABAZ39_RS03980	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABAZ39_RS04010	COG0473	3-isopropylmalate dehydrogenase activity
ABAZ39_RS04030	COG3932	Exopolysaccharide synthesis, ExoD
ABAZ39_RS04040	COG0538	isocitrate dehydrogenase activity
ABAZ39_RS04080	COG0456	acetyltransferase
ABAZ39_RS04080	COG1214	PFAM Peptidase M22, glycoprotease
ABAZ39_RS04085	COG2890	protein-(glutamine-N5) methyltransferase activity
ABAZ39_RS04090	COG1393	Belongs to the ArsC family
ABAZ39_RS04095	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABAZ39_RS04105	COG1403	HNH endonuclease
ABAZ39_RS04115	COG0505	Belongs to the CarA family
ABAZ39_RS04130	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABAZ39_RS04160	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABAZ39_RS04170	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABAZ39_RS04210	COG0251	oxidation-reduction process
ABAZ39_RS04215	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABAZ39_RS04235	COG2205	protein histidine kinase activity
ABAZ39_RS04240	COG0628	permease
ABAZ39_RS04250	COG1116	anion transmembrane transporter activity
ABAZ39_RS04255	COG0390	transport system, permease component
ABAZ39_RS04265	COG2198	Histidine kinase
ABAZ39_RS04265	COG0784	Response regulator, receiver
ABAZ39_RS04265	COG5002	protein histidine kinase activity
ABAZ39_RS04280	COG0616	signal peptide processing
ABAZ39_RS04290	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS04300	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABAZ39_RS04310	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABAZ39_RS04315	COG1295	ribonuclease BN
ABAZ39_RS04320	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABAZ39_RS04345	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABAZ39_RS04355	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABAZ39_RS04360	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABAZ39_RS04365	COG3266	domain, Protein
ABAZ39_RS04365	COG0515	serine threonine protein kinase
ABAZ39_RS04380	COG0564	pseudouridine synthase activity
ABAZ39_RS04405	COG0741	lytic transglycosylase activity
ABAZ39_RS04435	COG0312	modulator of DNA gyrase
ABAZ39_RS04445	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABAZ39_RS04445	COG1565	acr, cog1565
ABAZ39_RS04450	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABAZ39_RS04455	COG0109	protoheme IX farnesyltransferase activity
ABAZ39_RS04475	COG3346	SURF1 family
ABAZ39_RS04480	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
ABAZ39_RS04485	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
ABAZ39_RS04495	COG0612	Peptidase, M16
ABAZ39_RS04500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABAZ39_RS04510	COG1678	Uncharacterized ACR, COG1678
ABAZ39_RS04515	COG4232	protein-disulfide reductase activity
ABAZ39_RS04520	COG0678	peroxiredoxin activity
ABAZ39_RS04525	COG0318	PFAM AMP-dependent synthetase and ligase
ABAZ39_RS04530	COG0328	RNA-DNA hybrid ribonuclease activity
ABAZ39_RS04535	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABAZ39_RS04545	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABAZ39_RS04560	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABAZ39_RS04565	COG0509	glycine decarboxylation via glycine cleavage system
ABAZ39_RS04570	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABAZ39_RS04575	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABAZ39_RS04595	COG0483	inositol monophosphate 1-phosphatase activity
ABAZ39_RS04600	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABAZ39_RS04610	COG0604	alcohol dehydrogenase
ABAZ39_RS04615	COG2067	long-chain fatty acid transport protein
ABAZ39_RS04620	COG0730	response to heat
ABAZ39_RS04625	COG0352	thiamine-phosphate diphosphorylase activity
ABAZ39_RS04630	COG1830	Aldolase
ABAZ39_RS04670	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABAZ39_RS04675	COG1692	metallophosphoesterase
ABAZ39_RS04680	COG0217	transcriptional regulatory protein
ABAZ39_RS04695	COG2255	four-way junction helicase activity
ABAZ39_RS04700	COG0824	Thioesterase
ABAZ39_RS04710	COG0848	biopolymer transport protein
ABAZ39_RS04725	COG2885	chlorophyll binding
ABAZ39_RS04735	COG1086	Polysaccharide biosynthesis protein
ABAZ39_RS04745	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABAZ39_RS04750	COG0438	transferase activity, transferring glycosyl groups
ABAZ39_RS04765	COG0367	asparagine synthase
ABAZ39_RS04770	COG0697	spore germination
ABAZ39_RS04780	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABAZ39_RS04790	COG1765	OsmC-like protein
ABAZ39_RS04795	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS04800	COG2076	Multidrug Resistance protein
ABAZ39_RS04820	COG0784	Response regulator, receiver
ABAZ39_RS04820	COG3437	response regulator, receiver
ABAZ39_RS04835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS04835	COG4191	Histidine kinase
ABAZ39_RS04865	COG4520	surface antigen
ABAZ39_RS04870	COG0259	pyridoxamine-phosphate oxidase activity
ABAZ39_RS04880	COG0840	transmembrane signaling receptor activity
ABAZ39_RS04885	COG0840	transmembrane signaling receptor activity
ABAZ39_RS04895	COG1234	tRNA 3'-trailer cleavage
ABAZ39_RS04900	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABAZ39_RS04915	COG0523	cobalamin synthesis protein
ABAZ39_RS04920	COG0735	belongs to the Fur family
ABAZ39_RS04930	COG0415	Belongs to the DNA photolyase family
ABAZ39_RS04935	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
ABAZ39_RS04945	COG1201	RNA secondary structure unwinding
ABAZ39_RS04955	COG2226	methyltransferase
ABAZ39_RS04970	COG2267	carboxylic ester hydrolase activity
ABAZ39_RS04975	COG1846	Transcriptional regulator
ABAZ39_RS04985	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS05035	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS05040	COG0318	PFAM AMP-dependent synthetase and ligase
ABAZ39_RS05050	COG1960	acyl-CoA dehydrogenase activity
ABAZ39_RS05070	COG2833	Protein of unknown function (DUF455)
ABAZ39_RS05075	COG1218	3'(2'),5'-bisphosphate nucleotidase
ABAZ39_RS05090	COG0366	Alpha amylase catalytic
ABAZ39_RS05095	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABAZ39_RS05115	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS05120	COG1640	4-alpha-glucanotransferase
ABAZ39_RS05150	COG1671	Belongs to the UPF0178 family
ABAZ39_RS05155	COG0488	(ABC) transporter
ABAZ39_RS05170	COG2853	Lipoprotein
ABAZ39_RS05190	COG1410	methionine synthase
ABAZ39_RS05190	COG0646	methionine synthase
ABAZ39_RS05205	COG3706	GGDEF domain
ABAZ39_RS05210	COG2070	2-Nitropropane dioxygenase
ABAZ39_RS05215	COG0243	molybdopterin cofactor binding
ABAZ39_RS05230	COG2824	Alkylphosphonate utilization operon protein PhnA
ABAZ39_RS05260	COG2205	protein histidine kinase activity
ABAZ39_RS05280	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
ABAZ39_RS05285	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABAZ39_RS05300	COG1773	rubredoxin
ABAZ39_RS05310	COG3108	Peptidase M15
ABAZ39_RS05390	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABAZ39_RS05405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABAZ39_RS05410	COG0628	permease
ABAZ39_RS05415	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAZ39_RS05440	COG1228	amidohydrolase
ABAZ39_RS05445	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABAZ39_RS05455	COG0546	phosphoglycolate phosphatase activity
ABAZ39_RS05500	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ABAZ39_RS05505	COG2814	Major facilitator Superfamily
ABAZ39_RS05510	COG3546	catalase activity
ABAZ39_RS05530	COG3411	Ferredoxin
ABAZ39_RS05535	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABAZ39_RS05545	COG1024	Enoyl-CoA hydratase
ABAZ39_RS05555	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABAZ39_RS05615	COG1492	cobalamin metabolic process
ABAZ39_RS05620	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABAZ39_RS05630	COG3424	synthase
ABAZ39_RS05635	COG1755	Isoprenylcysteine carboxyl methyltransferase
ABAZ39_RS05645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS05655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS05685	COG1217	gtp-binding protein TYPA
ABAZ39_RS05705	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ABAZ39_RS05715	COG2313	pseudouridylate synthase activity
ABAZ39_RS05725	COG1793	dna ligase
ABAZ39_RS05735	COG2153	protein acetylation
ABAZ39_RS05755	COG3685	Protein conserved in bacteria
ABAZ39_RS05770	COG0698	ribose 5-phosphate isomerase
ABAZ39_RS05775	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABAZ39_RS05780	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABAZ39_RS05785	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABAZ39_RS05785	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABAZ39_RS05795	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABAZ39_RS05795	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABAZ39_RS05800	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABAZ39_RS05805	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABAZ39_RS05810	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABAZ39_RS05820	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ABAZ39_RS05840	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABAZ39_RS05845	COG0416	fatty acid biosynthetic process
ABAZ39_RS05850	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABAZ39_RS05870	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABAZ39_RS05870	COG4651	solute:proton antiporter activity
ABAZ39_RS05885	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABAZ39_RS05900	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABAZ39_RS05900	COG1648	precorrin-2 dehydrogenase activity
ABAZ39_RS05905	COG0175	sulfate reduction
ABAZ39_RS05910	COG0175	sulfate reduction
ABAZ39_RS05925	COG1116	anion transmembrane transporter activity
ABAZ39_RS05925	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAZ39_RS05935	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABAZ39_RS05955	COG0318	PFAM AMP-dependent synthetase and ligase
ABAZ39_RS05960	COG0789	Transcriptional regulator
ABAZ39_RS05975	COG2814	Major facilitator Superfamily
ABAZ39_RS05980	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ABAZ39_RS06015	COG0840	transmembrane signaling receptor activity
ABAZ39_RS06045	COG2197	response regulator
ABAZ39_RS06055	COG2197	response regulator
ABAZ39_RS06075	COG1160	GTP binding
ABAZ39_RS06080	COG1280	lysine exporter protein (LysE YggA)
ABAZ39_RS06085	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS06090	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ABAZ39_RS06105	COG0024	Methionine aminopeptidase
ABAZ39_RS06120	COG1127	ABC transporter
ABAZ39_RS06125	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABAZ39_RS06130	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABAZ39_RS06135	COG0305	Participates in initiation and elongation during chromosome replication
ABAZ39_RS06140	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABAZ39_RS06145	COG0359	binds to the 23S rRNA
ABAZ39_RS06155	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABAZ39_RS06160	COG0360	Binds together with S18 to 16S ribosomal RNA
ABAZ39_RS06165	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABAZ39_RS06180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABAZ39_RS06185	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABAZ39_RS06195	COG0741	lytic transglycosylase activity
ABAZ39_RS06200	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABAZ39_RS06205	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABAZ39_RS06210	COG2813	Specifically methylates the guanine in position
ABAZ39_RS06225	COG0113	porphobilinogen synthase activity
ABAZ39_RS06230	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABAZ39_RS06235	COG1597	lipid kinase activity
ABAZ39_RS06240	COG1024	Enoyl-CoA hydratase
ABAZ39_RS06245	COG1846	Transcriptional regulator
ABAZ39_RS06265	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS06280	COG0686	Belongs to the AlaDH PNT family
ABAZ39_RS06290	COG0737	Belongs to the 5'-nucleotidase family
ABAZ39_RS06295	COG0512	Glutamine amidotransferase of anthranilate synthase
ABAZ39_RS06300	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABAZ39_RS06305	COG3608	succinylglutamate desuccinylase aspartoacylase
ABAZ39_RS06305	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ABAZ39_RS06340	COG2358	TRAP transporter, solute receptor (TAXI family
ABAZ39_RS06370	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABAZ39_RS06420	COG0626	cystathionine gamma-synthase activity
ABAZ39_RS06425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS06430	COG4597	amino acid ABC transporter
ABAZ39_RS06435	COG0765	amino acid transport
ABAZ39_RS06440	COG1126	abc transporter atp-binding protein
ABAZ39_RS06445	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABAZ39_RS06465	COG2897	thiosulfate sulfurtransferase activity
ABAZ39_RS06480	COG0494	nUDIX hydrolase
ABAZ39_RS06485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABAZ39_RS06505	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABAZ39_RS06515	COG1538	Outer membrane efflux protein
ABAZ39_RS06525	COG0525	valine-tRNA ligase activity
ABAZ39_RS06530	COG0840	transmembrane signaling receptor activity
ABAZ39_RS06545	COG1686	Belongs to the peptidase S11 family
ABAZ39_RS06550	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABAZ39_RS06555	COG0470	DNA polymerase III
ABAZ39_RS06565	COG0084	hydrolase, TatD family'
ABAZ39_RS06570	COG0321	lipoyl(octanoyl) transferase activity
ABAZ39_RS06570	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABAZ39_RS06600	COG0631	protein serine/threonine phosphatase activity
ABAZ39_RS06610	COG2957	Belongs to the agmatine deiminase family
ABAZ39_RS06615	COG1177	transmembrane transport
ABAZ39_RS06620	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABAZ39_RS06625	COG3842	ATPase activity
ABAZ39_RS06635	COG0174	glutamine synthetase
ABAZ39_RS06640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABAZ39_RS06670	COG0861	Integral membrane protein TerC family
ABAZ39_RS06680	COG4957	zinc ion binding
ABAZ39_RS06715	COG1280	lysine exporter protein (LysE YggA)
ABAZ39_RS06725	COG0314	molybdopterin synthase activity
ABAZ39_RS06730	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ABAZ39_RS06740	COG1763	Mo-molybdopterin cofactor biosynthetic process
ABAZ39_RS06745	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABAZ39_RS06755	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS06800	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABAZ39_RS06800	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABAZ39_RS06810	COG0564	pseudouridine synthase activity
ABAZ39_RS06825	COG0784	Response regulator, receiver
ABAZ39_RS06825	COG2198	Histidine kinase
ABAZ39_RS06825	COG2205	protein histidine kinase activity
ABAZ39_RS06830	COG2197	response regulator
ABAZ39_RS06835	COG2885	chlorophyll binding
ABAZ39_RS06835	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABAZ39_RS06885	COG1940	carbohydrate kinase activity
ABAZ39_RS06905	COG0463	Glycosyl transferase, family 2
ABAZ39_RS06925	COG0704	Plays a role in the regulation of phosphate uptake
ABAZ39_RS06960	COG1396	sequence-specific DNA binding
ABAZ39_RS07080	COG0250	Participates in transcription elongation, termination and antitermination
ABAZ39_RS07225	COG0640	Transcriptional regulator
ABAZ39_RS07240	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABAZ39_RS07250	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
ABAZ39_RS07255	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABAZ39_RS07260	COG0830	nickel cation binding
ABAZ39_RS07265	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
ABAZ39_RS07270	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABAZ39_RS07275	COG0804	urea catabolic process
ABAZ39_RS07280	COG0832	Belongs to the urease beta subunit family
ABAZ39_RS07285	COG0831	urea catabolic process
ABAZ39_RS07290	COG0829	nickel cation binding
ABAZ39_RS07305	COG2197	response regulator
ABAZ39_RS07310	COG2197	response regulator
ABAZ39_RS07315	COG0693	protein deglycase activity
ABAZ39_RS07325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABAZ39_RS07355	COG0574	Belongs to the PEP-utilizing enzyme family
ABAZ39_RS07355	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABAZ39_RS07365	COG0469	pyruvate kinase activity
ABAZ39_RS07370	COG1802	Transcriptional regulator
ABAZ39_RS07375	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
ABAZ39_RS07375	COG0352	thiamine-phosphate diphosphorylase activity
ABAZ39_RS07380	COG3960	tartronate-semialdehyde synthase activity
ABAZ39_RS07385	COG3622	Belongs to the hyi family
ABAZ39_RS07390	COG2084	Dehydrogenase
ABAZ39_RS07405	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABAZ39_RS07420	COG2814	Major facilitator Superfamily
ABAZ39_RS07425	COG0583	DNA-binding transcription factor activity
ABAZ39_RS07435	COG0045	succinate-CoA ligase (ADP-forming) activity
ABAZ39_RS07440	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAZ39_RS07475	COG0517	IMP dehydrogenase activity
ABAZ39_RS07480	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABAZ39_RS07490	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABAZ39_RS07505	COG0656	L-ascorbic acid biosynthetic process
ABAZ39_RS07515	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABAZ39_RS07515	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABAZ39_RS07540	COG0371	Dehydrogenase
ABAZ39_RS07545	COG1494	fructose-1,6-bisphosphatase
ABAZ39_RS07555	COG0436	Aminotransferase
ABAZ39_RS07560	COG2814	Major facilitator Superfamily
ABAZ39_RS07575	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABAZ39_RS07580	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABAZ39_RS07580	COG2885	chlorophyll binding
ABAZ39_RS07585	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABAZ39_RS07590	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABAZ39_RS07595	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABAZ39_RS07600	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABAZ39_RS07610	COG1024	Enoyl-CoA hydratase
ABAZ39_RS07615	COG1832	CoA-binding protein
ABAZ39_RS07685	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS07710	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAZ39_RS07715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAZ39_RS07735	COG0436	Aminotransferase
ABAZ39_RS07750	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABAZ39_RS07760	COG0728	peptidoglycan biosynthetic process
ABAZ39_RS07765	COG0596	Alpha beta hydrolase
ABAZ39_RS07785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAZ39_RS07795	COG2986	histidine ammonia-lyase
ABAZ39_RS07800	COG0678	peroxiredoxin activity
ABAZ39_RS07830	COG0148	phosphopyruvate hydratase activity
ABAZ39_RS07840	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABAZ39_RS07845	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
ABAZ39_RS07850	COG0535	radical SAM domain protein
ABAZ39_RS07855	COG0535	radical SAM domain protein
ABAZ39_RS07885	COG0149	triose-phosphate isomerase activity
ABAZ39_RS07895	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ABAZ39_RS07940	COG0315	cyclic pyranopterin monophosphate synthase activity
ABAZ39_RS07945	COG0303	'Molybdopterin
ABAZ39_RS07950	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABAZ39_RS07955	COG0658	competence protein
ABAZ39_RS07955	COG2333	competence protein COMEC
ABAZ39_RS07960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABAZ39_RS07965	COG0372	Belongs to the citrate synthase family
ABAZ39_RS07980	COG0583	DNA-binding transcription factor activity
ABAZ39_RS07995	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAZ39_RS08000	COG3494	Protein of unknown function (DUF1009)
ABAZ39_RS08005	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAZ39_RS08025	COG0750	zinc metalloprotease
ABAZ39_RS08030	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABAZ39_RS08040	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABAZ39_RS08045	COG0233	cytoplasmic translational termination
ABAZ39_RS08050	COG0528	UMP kinase activity
ABAZ39_RS08055	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABAZ39_RS08060	COG0052	Belongs to the universal ribosomal protein uS2 family
ABAZ39_RS08095	COG1136	(ABC) transporter
ABAZ39_RS08105	COG0442	prolyl-tRNA aminoacylation
ABAZ39_RS08120	COG0519	Catalyzes the synthesis of GMP from XMP
ABAZ39_RS08130	COG0346	lactoylglutathione lyase activity
ABAZ39_RS08150	COG1007	ATP synthesis coupled electron transport
ABAZ39_RS08165	COG0713	ATP synthesis coupled electron transport
ABAZ39_RS08175	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABAZ39_RS08180	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABAZ39_RS08185	COG1034	ATP synthesis coupled electron transport
ABAZ39_RS08195	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ABAZ39_RS08200	COG0649	NAD binding
ABAZ39_RS08210	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABAZ39_RS08215	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABAZ39_RS08270	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABAZ39_RS08270	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABAZ39_RS08295	COG0443	Heat shock 70 kDa protein
ABAZ39_RS08300	COG1012	belongs to the aldehyde dehydrogenase family
ABAZ39_RS08300	COG2030	dehydratase
ABAZ39_RS08320	COG0670	Belongs to the BI1 family
ABAZ39_RS08335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAZ39_RS08340	COG0351	phosphomethylpyrimidine kinase
ABAZ39_RS08345	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABAZ39_RS08350	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABAZ39_RS08360	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ABAZ39_RS08365	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABAZ39_RS08370	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS08385	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABAZ39_RS08425	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS08430	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS08435	COG3845	ABC transporter
ABAZ39_RS08440	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABAZ39_RS08465	COG0546	phosphoglycolate phosphatase activity
ABAZ39_RS08470	COG3135	benzoate transporter
ABAZ39_RS08475	COG1802	Transcriptional regulator
ABAZ39_RS08480	COG0564	pseudouridine synthase activity
ABAZ39_RS08485	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABAZ39_RS08495	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABAZ39_RS08510	COG1238	metal cluster binding
ABAZ39_RS08515	COG0203	ribosomal protein L17
ABAZ39_RS08530	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABAZ39_RS08535	COG0469	pyruvate kinase activity
ABAZ39_RS08540	COG3852	Histidine kinase
ABAZ39_RS08545	COG1238	metal cluster binding
ABAZ39_RS08550	COG2832	Protein of unknown function (DUF454)
ABAZ39_RS08560	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABAZ39_RS08575	COG0546	phosphoglycolate phosphatase activity
ABAZ39_RS08590	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS08595	COG2084	Dehydrogenase
ABAZ39_RS08605	COG1733	regulation of RNA biosynthetic process
ABAZ39_RS08620	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABAZ39_RS08625	COG2261	transglycosylase associated protein
ABAZ39_RS08630	COG0784	Response regulator, receiver
ABAZ39_RS08640	COG2135	peptidase activity
ABAZ39_RS08650	COG2203	Gaf domain
ABAZ39_RS08650	COG2200	EAL domain
ABAZ39_RS08650	COG2199	diguanylate cyclase activity
ABAZ39_RS08660	COG0366	Alpha amylase catalytic
ABAZ39_RS08665	COG2326	polyphosphate kinase activity
ABAZ39_RS08675	COG0038	chloride channel
ABAZ39_RS08690	COG0411	ABC transporter
ABAZ39_RS08710	COG0697	spore germination
ABAZ39_RS08725	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ABAZ39_RS08730	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ABAZ39_RS08735	COG0295	cytidine deaminase activity
ABAZ39_RS08740	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS08745	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS08750	COG3845	ABC transporter
ABAZ39_RS08755	COG1744	ABC transporter substrate-binding protein PnrA-like
ABAZ39_RS08775	COG0768	penicillin binding
ABAZ39_RS08795	COG2862	Uncharacterized protein family, UPF0114
ABAZ39_RS08800	COG0704	Plays a role in the regulation of phosphate uptake
ABAZ39_RS08815	COG0028	Belongs to the TPP enzyme family
ABAZ39_RS08820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABAZ39_RS08825	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABAZ39_RS08850	COG0330	HflC and HflK could
ABAZ39_RS08855	COG0330	HflC and HflK could
ABAZ39_RS08860	COG0489	protein tyrosine kinase activity
ABAZ39_RS08875	COG4120	Belongs to the binding-protein-dependent transport system permease family
ABAZ39_RS08900	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
ABAZ39_RS08910	COG3070	regulator of competence-specific genes
ABAZ39_RS08920	COG0242	peptide deformylase activity
ABAZ39_RS08925	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABAZ39_RS08930	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABAZ39_RS09015	COG2897	thiosulfate sulfurtransferase activity
ABAZ39_RS09055	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABAZ39_RS09060	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABAZ39_RS09065	COG0343	queuine tRNA-ribosyltransferase activity
ABAZ39_RS09070	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABAZ39_RS09075	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABAZ39_RS09105	COG0318	PFAM AMP-dependent synthetase and ligase
ABAZ39_RS09125	COG2960	long-chain fatty acid transporting porin activity
ABAZ39_RS09150	COG3321	synthase
ABAZ39_RS09150	COG0604	alcohol dehydrogenase
ABAZ39_RS09150	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS09165	COG0288	reversible hydration of carbon dioxide
ABAZ39_RS09195	COG0205	6-phosphofructokinase activity
ABAZ39_RS09210	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABAZ39_RS09215	COG5001	Diguanylate cyclase
ABAZ39_RS09230	COG0114	fumarate hydratase activity
ABAZ39_RS09245	COG0456	acetyltransferase
ABAZ39_RS09280	COG1454	alcohol dehydrogenase
ABAZ39_RS09300	COG2951	lytic endotransglycosylase activity
ABAZ39_RS09310	COG0432	Pfam Uncharacterised protein family UPF0047
ABAZ39_RS09335	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS09345	COG5002	protein histidine kinase activity
ABAZ39_RS09350	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABAZ39_RS09350	COG2010	Cytochrome c
ABAZ39_RS09355	COG2080	2 iron, 2 sulfur cluster binding
ABAZ39_RS09360	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABAZ39_RS09360	COG2010	Cytochrome c
ABAZ39_RS09375	COG4221	oxidoreductase activity
ABAZ39_RS09400	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABAZ39_RS09485	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ABAZ39_RS09495	COG1451	nucleotide metabolic process
ABAZ39_RS09525	COG0482	sulfurtransferase activity
ABAZ39_RS09530	COG0633	Ferredoxin
ABAZ39_RS09535	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABAZ39_RS09550	COG1045	serine acetyltransferase
ABAZ39_RS09555	COG2945	thiolester hydrolase activity
ABAZ39_RS09560	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABAZ39_RS09575	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABAZ39_RS09580	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABAZ39_RS09585	COG1192	Involved in chromosome partitioning
ABAZ39_RS09590	COG0009	L-threonylcarbamoyladenylate synthase
ABAZ39_RS09595	COG0277	FAD linked oxidase domain protein
ABAZ39_RS09610	COG1960	acyl-CoA dehydrogenase activity
ABAZ39_RS09630	COG0247	lactate metabolic process
ABAZ39_RS09635	COG0277	FAD linked oxidase domain protein
ABAZ39_RS09640	COG0277	FAD linked oxidase domain protein
ABAZ39_RS09650	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABAZ39_RS09660	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
ABAZ39_RS09665	COG0842	Transport permease protein
ABAZ39_RS09670	COG1131	(ABC) transporter
ABAZ39_RS09680	COG1309	transcriptional regulator
ABAZ39_RS09705	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABAZ39_RS09720	COG5554	nitrogen fixation
ABAZ39_RS09745	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABAZ39_RS09760	COG0121	glutamine amidotransferase
ABAZ39_RS09815	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABAZ39_RS09820	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
ABAZ39_RS09835	COG5420	small protein containing a coiled-coil domain
ABAZ39_RS09890	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABAZ39_RS09915	COG5002	protein histidine kinase activity
ABAZ39_RS09915	COG2205	protein histidine kinase activity
ABAZ39_RS09915	COG0784	Response regulator, receiver
ABAZ39_RS09925	COG1278	Cold shock
ABAZ39_RS09930	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABAZ39_RS09935	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABAZ39_RS09950	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABAZ39_RS09965	COG2154	pterin-4-alpha-carbinolamine dehydratase
ABAZ39_RS09975	COG1104	cysteine desulfurase activity
ABAZ39_RS09985	COG4948	Mandelate Racemase Muconate Lactonizing
ABAZ39_RS09990	COG0840	transmembrane signaling receptor activity
ABAZ39_RS10010	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ABAZ39_RS10015	COG2894	cell division
ABAZ39_RS10020	COG0850	regulation of cytokinetic process
ABAZ39_RS10025	COG1702	phosphate starvation-inducible protein PhoH
ABAZ39_RS10040	COG1999	signal sequence binding
ABAZ39_RS10050	COG0356	it plays a direct role in the translocation of protons across the membrane
ABAZ39_RS10055	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABAZ39_RS10060	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABAZ39_RS10070	COG3384	dioxygenase
ABAZ39_RS10080	COG0235	Class ii aldolase
ABAZ39_RS10105	COG0437	4 iron, 4 sulfur cluster binding
ABAZ39_RS10110	COG0243	molybdopterin cofactor binding
ABAZ39_RS10110	COG3383	formate dehydrogenase (NAD+) activity
ABAZ39_RS10135	COG0746	molybdenum cofactor guanylyltransferase activity
ABAZ39_RS10140	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABAZ39_RS10155	COG1686	Belongs to the peptidase S11 family
ABAZ39_RS10180	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABAZ39_RS10195	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAZ39_RS10205	COG0590	tRNA wobble adenosine to inosine editing
ABAZ39_RS10230	COG2703	oxygen carrier activity
ABAZ39_RS10235	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABAZ39_RS10260	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABAZ39_RS10270	COG2030	dehydratase
ABAZ39_RS10275	COG0196	riboflavin kinase activity
ABAZ39_RS10280	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABAZ39_RS10285	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABAZ39_RS10290	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABAZ39_RS10300	COG0612	Peptidase, M16
ABAZ39_RS10305	COG0612	Peptidase, M16
ABAZ39_RS10315	COG0166	Belongs to the GPI family
ABAZ39_RS10340	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABAZ39_RS10355	COG0604	alcohol dehydrogenase
ABAZ39_RS10360	COG1309	transcriptional regulator
ABAZ39_RS10375	COG2010	Cytochrome c
ABAZ39_RS10380	COG5002	protein histidine kinase activity
ABAZ39_RS10380	COG0784	Response regulator, receiver
ABAZ39_RS10385	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS10430	COG0596	Alpha beta hydrolase
ABAZ39_RS10430	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABAZ39_RS10435	COG0022	dehydrogenase e1 component
ABAZ39_RS10440	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABAZ39_RS10445	COG3199	ATP-NAD kinase
ABAZ39_RS10450	COG3284	Transcriptional regulator
ABAZ39_RS10455	COG5265	(ABC) transporter
ABAZ39_RS10460	COG0667	Aldo Keto reductase
ABAZ39_RS10490	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABAZ39_RS10495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABAZ39_RS10505	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABAZ39_RS10540	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS10545	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABAZ39_RS10570	COG0747	negative chemotaxis
ABAZ39_RS10580	COG2201	protein-glutamate methylesterase activity
ABAZ39_RS10595	COG4221	oxidoreductase activity
ABAZ39_RS10605	COG0583	DNA-binding transcription factor activity
ABAZ39_RS10615	COG0747	negative chemotaxis
ABAZ39_RS10625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS10635	COG0251	oxidation-reduction process
ABAZ39_RS10645	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABAZ39_RS10650	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ABAZ39_RS10655	COG1749	Flagellar hook protein flgE
ABAZ39_RS10680	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABAZ39_RS10710	COG1309	transcriptional regulator
ABAZ39_RS10715	COG0583	DNA-binding transcription factor activity
ABAZ39_RS10720	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS10725	COG3959	Transketolase, thiamine diphosphate binding domain
ABAZ39_RS10730	COG3958	Transketolase
ABAZ39_RS10735	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABAZ39_RS10745	COG2084	Dehydrogenase
ABAZ39_RS10755	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABAZ39_RS10770	COG0742	ribosomal rna small subunit methyltransferase
ABAZ39_RS10775	COG1187	pseudouridine synthase activity
ABAZ39_RS10780	COG3360	Dodecin
ABAZ39_RS10785	COG0590	tRNA wobble adenosine to inosine editing
ABAZ39_RS10815	COG0418	dihydroorotase activity
ABAZ39_RS10820	COG0124	histidyl-tRNA synthetase
ABAZ39_RS10855	COG1546	Belongs to the CinA family
ABAZ39_RS10855	COG1058	Belongs to the CinA family
ABAZ39_RS10860	COG1489	DNA binding
ABAZ39_RS10865	COG0024	Methionine aminopeptidase
ABAZ39_RS10870	COG2003	Belongs to the UPF0758 family
ABAZ39_RS10885	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABAZ39_RS10900	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABAZ39_RS10905	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABAZ39_RS10915	COG2258	MOSC domain
ABAZ39_RS10925	COG0583	DNA-binding transcription factor activity
ABAZ39_RS10930	COG0047	phosphoribosylformylglycinamidine synthase activity
ABAZ39_RS10935	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABAZ39_RS10945	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABAZ39_RS10955	COG2962	Rard protein
ABAZ39_RS10965	COG1902	pentaerythritol trinitrate reductase activity
ABAZ39_RS10975	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABAZ39_RS10990	COG3279	Response regulator of the LytR AlgR family
ABAZ39_RS11000	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABAZ39_RS11030	COG2205	protein histidine kinase activity
ABAZ39_RS11030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS11060	COG1012	belongs to the aldehyde dehydrogenase family
ABAZ39_RS11080	COG1238	metal cluster binding
ABAZ39_RS11085	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS11090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABAZ39_RS11100	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABAZ39_RS11110	COG1674	ftsk spoiiie
ABAZ39_RS11135	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABAZ39_RS11140	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABAZ39_RS11150	COG1522	sequence-specific DNA binding
ABAZ39_RS11155	COG3660	Nucleoside-diphosphate-sugar epimerase
ABAZ39_RS11170	COG0492	ferredoxin-NADP+ reductase activity
ABAZ39_RS11180	COG0783	Belongs to the Dps family
ABAZ39_RS11190	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABAZ39_RS11195	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABAZ39_RS11240	COG2442	InterPro IPR007367
ABAZ39_RS11275	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABAZ39_RS11320	COG0583	DNA-binding transcription factor activity
ABAZ39_RS11325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAZ39_RS11330	COG1116	anion transmembrane transporter activity
ABAZ39_RS11335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABAZ39_RS11345	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABAZ39_RS11380	COG1902	pentaerythritol trinitrate reductase activity
ABAZ39_RS11405	COG1757	Na H antiporter
ABAZ39_RS11435	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
ABAZ39_RS11440	COG0058	SHG alpha-glucan phosphorylase activity
ABAZ39_RS11480	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS11485	COG0154	amidase activity
ABAZ39_RS11495	COG1024	Enoyl-CoA hydratase
ABAZ39_RS11500	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABAZ39_RS11505	COG0583	DNA-binding transcription factor activity
ABAZ39_RS11515	COG2801	Transposase and inactivated derivatives
ABAZ39_RS11540	COG4974	Belongs to the 'phage' integrase family
ABAZ39_RS11575	COG2801	Transposase and inactivated derivatives
ABAZ39_RS11600	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ABAZ39_RS11625	COG1475	DNA binding
ABAZ39_RS11685	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ABAZ39_RS11690	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABAZ39_RS11695	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABAZ39_RS11705	COG0167	dihydroorotate dehydrogenase activity
ABAZ39_RS11825	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABAZ39_RS11860	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABAZ39_RS11870	COG2084	Dehydrogenase
ABAZ39_RS11885	COG0840	transmembrane signaling receptor activity
ABAZ39_RS11885	COG2972	Histidine kinase
ABAZ39_RS11890	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
ABAZ39_RS11905	COG1199	ATP-dependent helicase activity
ABAZ39_RS11905	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABAZ39_RS11910	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABAZ39_RS11920	COG2076	Multidrug Resistance protein
ABAZ39_RS11925	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
ABAZ39_RS11940	COG0039	L-malate dehydrogenase activity
ABAZ39_RS11945	COG0045	succinate-CoA ligase (ADP-forming) activity
ABAZ39_RS11960	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABAZ39_RS11965	COG2205	protein histidine kinase activity
ABAZ39_RS11970	COG3706	GGDEF domain
ABAZ39_RS11975	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABAZ39_RS11990	COG2856	Zn peptidase
ABAZ39_RS12010	COG3436	PFAM IS66 Orf2 family protein
ABAZ39_RS12035	COG2801	Transposase and inactivated derivatives
ABAZ39_RS12045	COG0582	viral genome integration into host DNA
ABAZ39_RS12080	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ABAZ39_RS12130	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABAZ39_RS12135	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABAZ39_RS12140	COG0552	protein localization to endoplasmic reticulum
ABAZ39_RS12145	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABAZ39_RS12155	COG2917	probably involved in intracellular septation
ABAZ39_RS12170	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS12175	COG5002	protein histidine kinase activity
ABAZ39_RS12175	COG2176	DNA-directed DNA polymerase activity
ABAZ39_RS12185	COG5002	protein histidine kinase activity
ABAZ39_RS12195	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS12200	COG0643	Histidine kinase
ABAZ39_RS12200	COG2198	Histidine kinase
ABAZ39_RS12205	COG0835	chemotaxis
ABAZ39_RS12210	COG0840	transmembrane signaling receptor activity
ABAZ39_RS12220	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ABAZ39_RS12230	COG0840	transmembrane signaling receptor activity
ABAZ39_RS12235	COG1366	Belongs to the anti-sigma-factor antagonist family
ABAZ39_RS12250	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS12270	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS12280	COG1366	Belongs to the anti-sigma-factor antagonist family
ABAZ39_RS12290	COG2205	protein histidine kinase activity
ABAZ39_RS12290	COG5002	protein histidine kinase activity
ABAZ39_RS12290	COG0784	Response regulator, receiver
ABAZ39_RS12310	COG0513	Belongs to the DEAD box helicase family
ABAZ39_RS12325	COG0625	glutathione transferase activity
ABAZ39_RS12330	COG3842	ATPase activity
ABAZ39_RS12335	COG0395	ABC-type sugar transport system, permease component
ABAZ39_RS12365	COG0784	Response regulator, receiver
ABAZ39_RS12365	COG2205	protein histidine kinase activity
ABAZ39_RS12375	COG2814	Major facilitator Superfamily
ABAZ39_RS12380	COG1285	pathogenesis
ABAZ39_RS12415	COG2835	tetraacyldisaccharide 4'-kinase activity
ABAZ39_RS12420	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABAZ39_RS12425	COG3118	belongs to the thioredoxin family
ABAZ39_RS12440	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABAZ39_RS12455	COG0840	transmembrane signaling receptor activity
ABAZ39_RS12465	COG3437	response regulator, receiver
ABAZ39_RS12465	COG2770	Histidine kinase
ABAZ39_RS12470	COG2902	Dehydrogenase
ABAZ39_RS12475	COG2264	protein methyltransferase activity
ABAZ39_RS12495	COG0138	bifunctional purine biosynthesis protein purh
ABAZ39_RS12505	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABAZ39_RS12505	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABAZ39_RS12520	COG0501	Belongs to the peptidase M48B family
ABAZ39_RS12525	COG5508	conserved small protein
ABAZ39_RS12540	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAZ39_RS12555	COG2350	Protein conserved in bacteria
ABAZ39_RS12560	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABAZ39_RS12575	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABAZ39_RS12580	COG0181	hydroxymethylbilane synthase activity
ABAZ39_RS12610	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABAZ39_RS12640	COG2885	chlorophyll binding
ABAZ39_RS12650	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABAZ39_RS12665	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ABAZ39_RS12680	COG5002	protein histidine kinase activity
ABAZ39_RS12695	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABAZ39_RS12710	COG0582	viral genome integration into host DNA
ABAZ39_RS12720	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABAZ39_RS12800	COG0210	DNA helicase
ABAZ39_RS12815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS12825	COG4166	transmembrane transport
ABAZ39_RS12875	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABAZ39_RS12890	COG2967	ApaG domain
ABAZ39_RS12895	COG0302	gtp cyclohydrolase
ABAZ39_RS12905	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABAZ39_RS12925	COG0444	Belongs to the ABC transporter superfamily
ABAZ39_RS12930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS12935	COG0601	transmembrane transport
ABAZ39_RS12940	COG0747	negative chemotaxis
ABAZ39_RS12995	COG0671	phosphoesterase, PA-phosphatase related
ABAZ39_RS13005	COG3437	response regulator, receiver
ABAZ39_RS13005	COG0784	Response regulator, receiver
ABAZ39_RS13020	COG1842	Phage shock protein A
ABAZ39_RS13025	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ABAZ39_RS13035	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ABAZ39_RS13050	COG3005	denitrification pathway
ABAZ39_RS13055	COG1858	cytochrome C peroxidase
ABAZ39_RS13060	COG0753	catalase activity
ABAZ39_RS13065	COG0459	protein refolding
ABAZ39_RS13070	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABAZ39_RS13075	COG5425	PFAM Usg family protein
ABAZ39_RS13080	COG3772	lysozyme
ABAZ39_RS13085	COG0543	2 iron, 2 sulfur cluster binding
ABAZ39_RS13085	COG0493	'glutamate synthase
ABAZ39_RS13090	COG1612	heme a metabolic process
ABAZ39_RS13120	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS13135	COG3437	response regulator, receiver
ABAZ39_RS13135	COG0784	Response regulator, receiver
ABAZ39_RS13140	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABAZ39_RS13155	COG3800	Transcriptional regulator
ABAZ39_RS13155	COG1396	sequence-specific DNA binding
ABAZ39_RS13160	COG2224	Isocitrate lyase
ABAZ39_RS13165	COG0693	protein deglycase activity
ABAZ39_RS13175	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABAZ39_RS13180	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABAZ39_RS13180	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABAZ39_RS13185	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABAZ39_RS13205	COG3685	Protein conserved in bacteria
ABAZ39_RS13225	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
ABAZ39_RS13230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS13240	COG0747	negative chemotaxis
ABAZ39_RS13250	COG0606	chelatase, subunit chli
ABAZ39_RS13270	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABAZ39_RS13275	COG0347	Belongs to the P(II) protein family
ABAZ39_RS13280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABAZ39_RS13285	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ABAZ39_RS13290	COG0667	Aldo Keto reductase
ABAZ39_RS13305	COG4181	ATPase activity
ABAZ39_RS13315	COG3706	GGDEF domain
ABAZ39_RS13320	COG0484	heat shock protein binding
ABAZ39_RS13325	COG0443	Heat shock 70 kDa protein
ABAZ39_RS13355	COG1420	regulation of RNA biosynthetic process
ABAZ39_RS13360	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ABAZ39_RS13365	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABAZ39_RS13370	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABAZ39_RS13380	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ABAZ39_RS13405	COG0792	nuclease activity
ABAZ39_RS13410	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABAZ39_RS13440	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABAZ39_RS13475	COG0683	leucine binding
ABAZ39_RS13480	COG2205	protein histidine kinase activity
ABAZ39_RS13480	COG0784	Response regulator, receiver
ABAZ39_RS13490	COG0180	Tryptophanyl-tRNA synthetase
ABAZ39_RS13495	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
ABAZ39_RS13505	COG3012	SEC-C Motif Domain Protein
ABAZ39_RS13520	COG0110	maltose O-acetyltransferase activity
ABAZ39_RS13525	COG1309	transcriptional regulator
ABAZ39_RS13530	COG1028	Short-chain dehydrogenase reductase Sdr
ABAZ39_RS13545	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ABAZ39_RS13550	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ABAZ39_RS13555	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ABAZ39_RS13580	COG0438	transferase activity, transferring glycosyl groups
ABAZ39_RS13600	COG1132	(ABC) transporter
ABAZ39_RS13605	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABAZ39_RS13605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABAZ39_RS13635	COG0601	transmembrane transport
ABAZ39_RS13640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABAZ39_RS13650	COG1234	tRNA 3'-trailer cleavage
ABAZ39_RS13670	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS13745	COG0357	Ribosomal RNA small subunit methyltransferase G
ABAZ39_RS13750	COG0445	tRNA wobble uridine modification
ABAZ39_RS13760	COG3411	Ferredoxin
ABAZ39_RS13770	COG1331	Highly conserved protein containing a thioredoxin domain
ABAZ39_RS13775	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABAZ39_RS13785	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABAZ39_RS13790	COG0237	dephospho-CoA kinase activity
ABAZ39_RS13815	COG1981	membrane
ABAZ39_RS13825	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABAZ39_RS13830	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ABAZ39_RS13840	COG4395	Tim44
ABAZ39_RS13845	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ABAZ39_RS13900	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABAZ39_RS13905	COG0488	(ABC) transporter
ABAZ39_RS13910	COG2205	protein histidine kinase activity
ABAZ39_RS13925	COG1556	Lactate utilization protein
ABAZ39_RS13930	COG1139	Iron-sulfur cluster binding protein
ABAZ39_RS13935	COG0247	lactate metabolic process
ABAZ39_RS13955	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABAZ39_RS13960	COG1121	(ABC) transporter
ABAZ39_RS13970	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABAZ39_RS13975	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABAZ39_RS13985	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABAZ39_RS14000	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABAZ39_RS14005	COG0730	response to heat
ABAZ39_RS14030	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABAZ39_RS14040	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ABAZ39_RS14045	COG1214	PFAM Peptidase M22, glycoprotease
ABAZ39_RS14075	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABAZ39_RS14080	COG1702	phosphate starvation-inducible protein PhoH
ABAZ39_RS14090	COG1253	flavin adenine dinucleotide binding
ABAZ39_RS14095	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABAZ39_RS14100	COG1396	sequence-specific DNA binding
ABAZ39_RS14105	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABAZ39_RS14110	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABAZ39_RS14115	COG2329	Antibiotic biosynthesis monooxygenase
ABAZ39_RS14120	COG0779	Required for maturation of 30S ribosomal subunits
ABAZ39_RS14140	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABAZ39_RS14145	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABAZ39_RS14155	COG1185	polyribonucleotide nucleotidyltransferase activity
ABAZ39_RS14160	COG2321	neutral zinc metallopeptidase
ABAZ39_RS14170	COG1509	lysine 2,3-aminomutase activity
ABAZ39_RS14175	COG0584	glycerophosphoryl diester phosphodiesterase
ABAZ39_RS14190	COG1592	Rubrerythrin
ABAZ39_RS14220	COG0039	L-malate dehydrogenase activity
ABAZ39_RS14225	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABAZ39_RS14230	COG4166	transmembrane transport
ABAZ39_RS14240	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABAZ39_RS14255	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABAZ39_RS14265	COG1024	Enoyl-CoA hydratase
ABAZ39_RS14270	COG0268	Binds directly to 16S ribosomal RNA
ABAZ39_RS14315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABAZ39_RS14470	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABAZ39_RS14560	COG2205	protein histidine kinase activity
ABAZ39_RS14560	COG2202	Pas domain
ABAZ39_RS14915	COG2205	protein histidine kinase activity
ABAZ39_RS14925	COG2205	protein histidine kinase activity
ABAZ39_RS14925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS15135	COG0513	Belongs to the DEAD box helicase family
ABAZ39_RS15255	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABAZ39_RS15375	COG0405	Gamma-glutamyltransferase
ABAZ39_RS15780	COG0335	large ribosomal subunit rRNA binding
ABAZ39_RS15975	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABAZ39_RS16065	COG0126	phosphoglycerate kinase activity
ABAZ39_RS16110	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAZ39_RS16525	COG1116	anion transmembrane transporter activity
ABAZ39_RS16860	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABAZ39_RS16930	COG0784	Response regulator, receiver
ABAZ39_RS16930	COG4191	Histidine kinase
ABAZ39_RS17075	COG1396	sequence-specific DNA binding
ABAZ39_RS17325	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABAZ39_RS17495	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABAZ39_RS17965	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABAZ39_RS18155	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABAZ39_RS18220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS18220	COG2205	protein histidine kinase activity
ABAZ39_RS18315	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABAZ39_RS18355	COG3266	domain, Protein
ABAZ39_RS18355	COG0515	serine threonine protein kinase
ABAZ39_RS18500	COG0318	PFAM AMP-dependent synthetase and ligase
ABAZ39_RS18510	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABAZ39_RS18555	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABAZ39_RS19550	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ABAZ39_RS20100	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABAZ39_RS20110	COG0359	binds to the 23S rRNA
ABAZ39_RS20390	COG0525	valine-tRNA ligase activity
ABAZ39_RS20985	COG0804	urea catabolic process
ABAZ39_RS21090	COG3960	tartronate-semialdehyde synthase activity
ABAZ39_RS21265	COG0436	Aminotransferase
ABAZ39_RS21665	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAZ39_RS21895	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABAZ39_RS21895	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABAZ39_RS22130	COG2832	Protein of unknown function (DUF454)
ABAZ39_RS22735	COG2217	Heavy metal translocating P-type atpase
ABAZ39_RS22765	COG5002	protein histidine kinase activity
ABAZ39_RS23020	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABAZ39_RS23280	COG2205	protein histidine kinase activity
ABAZ39_RS23345	COG0033	Phosphoglucomutase
ABAZ39_RS23450	COG0513	Belongs to the DEAD box helicase family
ABAZ39_RS23625	COG0463	Glycosyl transferase, family 2
ABAZ39_RS24070	COG1322	Protein conserved in bacteria
ABAZ39_RS24765	COG3180	Ammonia monooxygenase
ABAZ39_RS24945	COG0006	proline dipeptidase activity
ABAZ39_RS24970	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABAZ39_RS25290	COG0439	Biotin carboxylase
ABAZ39_RS25440	COG1530	ribonuclease E activity
ABAZ39_RS25735	COG0085	RNA polymerase activity
ABAZ39_RS25755	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABAZ39_RS25980	COG4786	Flagellar basal body rod
ABAZ39_RS26120	COG0473	3-isopropylmalate dehydrogenase activity
ABAZ39_RS26245	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABAZ39_RS26720	COG1595	DNA-templated transcription, initiation
ABAZ39_RS26890	COG1074	ATP-dependent DNA helicase activity
ABAZ39_RS27030	COG0033	Phosphoglucomutase
ABAZ39_RS27140	COG0653	protein targeting
ABAZ39_RS27410	COG0539	negative regulation of cytoplasmic translation
ABAZ39_RS27645	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABAZ39_RS28330	COG0840	transmembrane signaling receptor activity
ABAZ39_RS28490	COG2766	serine protein kinase
ABAZ39_RS28705	COG0210	DNA helicase
ABAZ39_RS28815	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABAZ39_RS29385	COG0280	phosphate acetyltransferase
ABAZ39_RS29385	COG0281	malic enzyme
ABAZ39_RS29505	COG1321	iron dependent repressor
ABAZ39_RS29505	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABAZ39_RS29545	COG0326	Molecular chaperone. Has ATPase activity
ABAZ39_RS29640	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABAZ39_RS30020	COG0784	Response regulator, receiver
ABAZ39_RS30020	COG2205	protein histidine kinase activity
ABAZ39_RS30020	COG5002	protein histidine kinase activity
ABAZ39_RS30155	COG0514	ATP-dependent DNA helicase (RecQ)
ABAZ39_RS30720	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABAZ39_RS31070	COG4174	ABC transporter (Permease)
ABAZ39_RS31100	COG0483	inositol monophosphate 1-phosphatase activity
ABAZ39_RS31145	COG2226	methyltransferase
ABAZ39_RS31200	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABAZ39_RS31555	COG2766	serine protein kinase
ABAZ39_RS31560	COG2766	serine protein kinase
ABAZ39_RS31605	COG1643	Atp-dependent helicase
ABAZ39_RS31835	COG2264	protein methyltransferase activity
ABAZ39_RS31960	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABAZ39_RS31995	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABAZ39_RS32115	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABAZ39_RS32355	COG0784	Response regulator, receiver
ABAZ39_RS32355	COG2205	protein histidine kinase activity
ABAZ39_RS32355	COG5002	protein histidine kinase activity
ABAZ39_RS32760	COG2202	Pas domain
ABAZ39_RS32760	COG2205	protein histidine kinase activity
ABAZ39_RS32775	COG1215	transferase activity, transferring glycosyl groups
ABAZ39_RS32785	COG2205	protein histidine kinase activity
ABAZ39_RS32785	COG2202	Pas domain
ABAZ39_RS32810	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABAZ39_RS32840	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABAZ39_RS32860	COG2205	protein histidine kinase activity
ABAZ39_RS32860	COG0784	Response regulator, receiver
ABAZ39_RS32860	COG5002	protein histidine kinase activity
ABAZ39_RS32905	COG0745	RESPONSE REGULATOR receiver
ABAZ39_RS32955	COG0644	oxidoreductase
ABAZ39_RS32960	COG2205	protein histidine kinase activity
ABAZ39_RS32960	COG5002	protein histidine kinase activity
ABAZ39_RS32960	COG0784	Response regulator, receiver
ABAZ39_RS33000	COG4191	Histidine kinase
ABAZ39_RS33000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABAZ39_RS33020	COG2202	Pas domain
ABAZ39_RS33020	COG2205	protein histidine kinase activity
ABAZ39_RS33025	COG1366	Belongs to the anti-sigma-factor antagonist family
ABAZ39_RS33085	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABAZ39_RS33090	COG0463	Glycosyl transferase, family 2
ABAZ39_RS33235	COG0469	pyruvate kinase activity
ABAZ39_RS33505	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABAZ39_RS33645	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family