locus-tag class description D3093_RS00040 PF10415 Fumarase C C-terminus D3093_RS00040 PF00206 Lyase D3093_RS00060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D3093_RS00060 PF02222 ATP-grasp domain D3093_RS00065 PF00731 AIR carboxylase D3093_RS00075 PF00365 Phosphofructokinase D3093_RS00085 PF13302 Acetyltransferase (GNAT) domain D3093_RS00100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS00100 PF00460 Flagella basal body rod protein D3093_RS00100 PF07559 Flagellar basal body protein FlaE D3093_RS00105 PF00484 Carbonic anhydrase D3093_RS00110 PF02441 Flavoprotein D3093_RS00120 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS00120 PF14765 Polyketide synthase dehydratase D3093_RS00120 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS00120 PF00550 Phosphopantetheine attachment site D3093_RS00120 PF08659 KR domain D3093_RS00120 PF00698 Acyl transferase domain D3093_RS00120 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS00120 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS00145 PF04380 Membrane fusogenic activity D3093_RS00155 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3093_RS00155 PF03807 NADP oxidoreductase coenzyme F420-dependent D3093_RS00165 PF13193 AMP-binding enzyme C-terminal domain D3093_RS00165 PF00501 AMP-binding enzyme D3093_RS00175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS00175 PF00672 HAMP domain D3093_RS00195 PF08331 Domain of unknown function (DUF1730) D3093_RS00200 PF14489 QueF-like protein D3093_RS00205 PF01702 Queuine tRNA-ribosyltransferase D3093_RS00210 PF02547 Queuosine biosynthesis protein D3093_RS00215 PF03109 ABC1 family D3093_RS00220 PF08269 Cache domain D3093_RS00220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS00225 PF08031 Berberine and berberine like D3093_RS00225 PF01565 FAD binding domain D3093_RS00250 PF13193 AMP-binding enzyme C-terminal domain D3093_RS00250 PF00501 AMP-binding enzyme D3093_RS00250 PF16177 Acetyl-coenzyme A synthetase N-terminus D3093_RS00260 PF00581 Rhodanese-like domain D3093_RS00270 PF04542 Sigma-70 region 2 D3093_RS00270 PF08281 Sigma-70, region 4 D3093_RS00280 PF03704 Bacterial transcriptional activator domain D3093_RS00280 PF00931 NB-ARC domain D3093_RS00280 PF00486 Transcriptional regulatory protein, C terminal D3093_RS00310 PF00072 Response regulator receiver domain D3093_RS00330 PF00425 chorismate binding enzyme D3093_RS00330 PF00117 Glutamine amidotransferase class-I D3093_RS00330 PF04715 Anthranilate synthase component I, N terminal region D3093_RS00335 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D3093_RS00340 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3093_RS00340 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3093_RS00345 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D3093_RS00350 PF02233 NAD(P) transhydrogenase beta subunit D3093_RS00360 PF02548 Ketopantoate hydroxymethyltransferase D3093_RS00365 PF01165 Ribosomal protein S21 D3093_RS00370 PF01327 Polypeptide deformylase D3093_RS00380 PF04994 TfoX C-terminal domain D3093_RS00380 PF04993 TfoX N-terminal domain D3093_RS00395 PF02511 Thymidylate synthase complementing protein D3093_RS00420 PF02653 Branched-chain amino acid transport system / permease component D3093_RS00425 PF00005 ABC transporter D3093_RS00435 PF01883 Iron-sulfur cluster assembly protein D3093_RS00435 PF10609 NUBPL iron-transfer P-loop NTPase D3093_RS00440 PF01145 SPFH domain / Band 7 family D3093_RS00440 PF12221 Bacterial membrane protein N terminal D3093_RS00445 PF01145 SPFH domain / Band 7 family D3093_RS00455 PF13180 PDZ domain D3093_RS00475 PF00155 Aminotransferase class I and II D3093_RS00480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS00480 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS00480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS00485 PF10369 Small subunit of acetolactate synthase D3093_RS00490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D3093_RS00490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D3093_RS00495 PF01895 PhoU domain D3093_RS00500 PF03350 Uncharacterized protein family, UPF0114 D3093_RS00510 PF04085 rod shape-determining protein MreC D3093_RS00520 PF03717 Penicillin-binding Protein dimerisation domain D3093_RS00520 PF00905 Penicillin binding protein transpeptidase domain D3093_RS00525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS00540 PF02608 ABC transporter substrate-binding protein PnrA-like D3093_RS00545 PF00005 ABC transporter D3093_RS00550 PF02653 Branched-chain amino acid transport system / permease component D3093_RS00555 PF02653 Branched-chain amino acid transport system / permease component D3093_RS00560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3093_RS00565 PF01048 Phosphorylase superfamily D3093_RS00570 PF01791 DeoC/LacD family aldolase D3093_RS00575 PF00591 Glycosyl transferase family, a/b domain D3093_RS00575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D3093_RS00575 PF02885 Glycosyl transferase family, helical bundle domain D3093_RS00585 PF00892 EamA-like transporter family D3093_RS00605 PF00005 ABC transporter D3093_RS00605 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS00610 PF00005 ABC transporter D3093_RS00620 PF00654 Voltage gated chloride channel D3093_RS00625 PF03976 Polyphosphate kinase 2 (PPK2) D3093_RS00630 PF03976 Polyphosphate kinase 2 (PPK2) D3093_RS00635 PF11896 Domain of unknown function (DUF3416) D3093_RS00635 PF00128 Alpha amylase, catalytic domain D3093_RS00645 PF00989 PAS fold D3093_RS00645 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS00645 PF01590 GAF domain D3093_RS00645 PF00563 EAL domain D3093_RS00650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS00650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS00655 PF02586 SOS response associated peptidase (SRAP) D3093_RS00665 PF00072 Response regulator receiver domain D3093_RS00670 PF04226 Transglycosylase associated protein D3093_RS00675 PF00834 Ribulose-phosphate 3 epimerase family D3093_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS00680 PF03459 TOBE domain D3093_RS00685 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS00685 PF00107 Zinc-binding dehydrogenase D3093_RS00690 PF01638 HxlR-like helix-turn-helix D3093_RS00705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS00705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS00715 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS00725 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS00740 PF00994 Probable molybdopterin binding domain D3093_RS00745 PF13746 4Fe-4S dicluster domain D3093_RS00745 PF12801 4Fe-4S binding domain D3093_RS00745 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3093_RS00750 PF04304 Protein of unknown function (DUF454) D3093_RS00755 PF09335 SNARE associated Golgi protein D3093_RS00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS00760 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS00760 PF00989 PAS fold D3093_RS00765 PF02887 Pyruvate kinase, alpha/beta domain D3093_RS00765 PF00224 Pyruvate kinase, barrel domain D3093_RS00770 PF00416 Ribosomal protein S13/S18 D3093_RS00775 PF00411 Ribosomal protein S11 D3093_RS00780 PF01000 RNA polymerase Rpb3/RpoA insert domain D3093_RS00780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D3093_RS00780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D3093_RS00785 PF01196 Ribosomal protein L17 D3093_RS00790 PF09335 SNARE associated Golgi protein D3093_RS00805 PF12002 MgsA AAA+ ATPase C terminal D3093_RS00805 PF16193 AAA C-terminal domain D3093_RS00805 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS00820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D3093_RS00825 PF01479 S4 domain D3093_RS00825 PF00849 RNA pseudouridylate synthase D3093_RS00830 PF00392 Bacterial regulatory proteins, gntR family D3093_RS00830 PF07729 FCD domain D3093_RS00835 PF03594 Benzoate membrane transport protein D3093_RS00840 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS00865 PF01272 Transcription elongation factor, GreA/GreB, C-term D3093_RS00865 PF14760 Rnk N-terminus D3093_RS00870 PF00005 ABC transporter D3093_RS00875 PF02653 Branched-chain amino acid transport system / permease component D3093_RS00880 PF02653 Branched-chain amino acid transport system / permease component D3093_RS00885 PF02608 ABC transporter substrate-binding protein PnrA-like D3093_RS00910 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS00910 PF00072 Response regulator receiver domain D3093_RS00920 PF10996 Beta-Casp domain D3093_RS00920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3093_RS00920 PF00753 Metallo-beta-lactamase superfamily D3093_RS00930 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS00930 PF00563 EAL domain D3093_RS00930 PF03707 Bacterial signalling protein N terminal repeat D3093_RS00935 PF00106 short chain dehydrogenase D3093_RS00940 PF12867 DinB superfamily D3093_RS00940 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS00945 PF10017 Histidine-specific methyltransferase, SAM-dependent D3093_RS00955 PF00809 Pterin binding enzyme D3093_RS00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3093_RS00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3093_RS00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3093_RS00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3093_RS00965 PF08543 Phosphomethylpyrimidine kinase D3093_RS00970 PF00155 Aminotransferase class I and II D3093_RS00970 PF00392 Bacterial regulatory proteins, gntR family D3093_RS00985 PF01027 Inhibitor of apoptosis-promoting Bax1 D3093_RS01000 PF02567 Phenazine biosynthesis-like protein D3093_RS01005 PF01575 MaoC like domain D3093_RS01005 PF00171 Aldehyde dehydrogenase family D3093_RS01010 PF00012 Hsp70 protein D3093_RS01015 PF00120 Glutamine synthetase, catalytic domain D3093_RS01015 PF03951 Glutamine synthetase, beta-Grasp domain D3093_RS01020 PF00543 Nitrogen regulatory protein P-II D3093_RS01035 PF01256 Carbohydrate kinase D3093_RS01035 PF03853 YjeF-related protein N-terminus D3093_RS01050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D3093_RS01050 PF05698 Bacterial trigger factor protein (TF) C-terminus D3093_RS01050 PF05697 Bacterial trigger factor protein (TF) D3093_RS01055 PF00574 Clp protease D3093_RS01060 PF07724 AAA domain (Cdc48 subfamily) D3093_RS01060 PF06689 ClpX C4-type zinc finger D3093_RS01060 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS01070 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3093_RS01070 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS01070 PF05362 Lon protease (S16) C-terminal proteolytic domain D3093_RS01075 PF00216 Bacterial DNA-binding protein D3093_RS01090 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D3093_RS01095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3093_RS01100 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D3093_RS01105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D3093_RS01115 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3093_RS01115 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3093_RS01115 PF10531 SLBB domain D3093_RS01120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3093_RS01120 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D3093_RS01120 PF00384 Molybdopterin oxidoreductase D3093_RS01125 PF00146 NADH dehydrogenase D3093_RS01130 PF12838 4Fe-4S dicluster domain D3093_RS01135 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D3093_RS01140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3093_RS01145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3093_RS01145 PF00361 Proton-conducting membrane transporter D3093_RS01150 PF00361 Proton-conducting membrane transporter D3093_RS01150 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D3093_RS01155 PF00361 Proton-conducting membrane transporter D3093_RS01160 PF03099 Biotin/lipoate A/B protein ligase family D3093_RS01160 PF02237 Biotin protein ligase C terminal domain D3093_RS01165 PF03309 Type III pantothenate kinase D3093_RS01170 PF12706 Beta-lactamase superfamily domain D3093_RS01170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3093_RS01170 PF17770 Ribonuclease J C-terminal domain D3093_RS01185 PF13673 Acetyltransferase (GNAT) domain D3093_RS01185 PF03352 Methyladenine glycosylase D3093_RS01185 PF00958 GMP synthase C terminal domain D3093_RS01185 PF00117 Glutamine amidotransferase class-I D3093_RS01185 PF13302 Acetyltransferase (GNAT) domain D3093_RS01200 PF03129 Anticodon binding domain D3093_RS01200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3093_RS01205 PF12704 MacB-like periplasmic core domain D3093_RS01205 PF02687 FtsX-like permease family D3093_RS01210 PF00005 ABC transporter D3093_RS01215 PF01738 Dienelactone hydrolase family D3093_RS01220 PF00892 EamA-like transporter family D3093_RS01245 PF00318 Ribosomal protein S2 D3093_RS01250 PF00889 Elongation factor TS D3093_RS01255 PF00696 Amino acid kinase family D3093_RS01260 PF01765 Ribosome recycling factor D3093_RS01265 PF01255 Putative undecaprenyl diphosphate synthase D3093_RS01275 PF13288 DXP reductoisomerase C-terminal domain D3093_RS01275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D3093_RS01275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D3093_RS01280 PF02163 Peptidase family M50 D3093_RS01280 PF17820 PDZ domain D3093_RS01285 PF07244 Surface antigen variable number repeat D3093_RS01285 PF01103 Surface antigen D3093_RS01295 PF07977 FabA-like domain D3093_RS01300 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS01300 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D3093_RS01305 PF17930 LpxI N-terminal domain D3093_RS01305 PF06230 LpxI C-terminal domain D3093_RS01310 PF02684 Lipid-A-disaccharide synthetase D3093_RS01315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3093_RS01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS01325 PF03466 LysR substrate binding domain D3093_RS01330 PF13417 Glutathione S-transferase, N-terminal domain D3093_RS01340 PF00285 Citrate synthase, C-terminal domain D3093_RS01345 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3093_RS01350 PF03772 Competence protein D3093_RS01350 PF00753 Metallo-beta-lactamase superfamily D3093_RS01355 PF01726 LexA DNA binding domain D3093_RS01355 PF00717 Peptidase S24-like D3093_RS01360 PF03453 MoeA N-terminal region (domain I and II) D3093_RS01360 PF00994 Probable molybdopterin binding domain D3093_RS01360 PF03454 MoeA C-terminal region (domain IV) D3093_RS01365 PF01967 MoaC family D3093_RS01370 PF00583 Acetyltransferase (GNAT) family D3093_RS01375 PF00218 Indole-3-glycerol phosphate synthase D3093_RS01380 PF02885 Glycosyl transferase family, helical bundle domain D3093_RS01380 PF00591 Glycosyl transferase family, a/b domain D3093_RS01385 PF00117 Glutamine amidotransferase class-I D3093_RS01410 PF04715 Anthranilate synthase component I, N terminal region D3093_RS01410 PF00425 chorismate binding enzyme D3093_RS01420 PF00121 Triosephosphate isomerase D3093_RS01425 PF03840 Preprotein translocase SecG subunit D3093_RS01430 PF00117 Glutamine amidotransferase class-I D3093_RS01430 PF06418 CTP synthase N-terminus D3093_RS01435 PF01738 Dienelactone hydrolase family D3093_RS01440 PF00793 DAHP synthetase I family D3093_RS01450 PF04055 Radical SAM superfamily D3093_RS01450 PF13186 Iron-sulfur cluster-binding domain D3093_RS01455 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D3093_RS01460 PF03070 TENA/THI-4/PQQC family D3093_RS01465 PF12706 Beta-lactamase superfamily domain D3093_RS01475 PF00113 Enolase, C-terminal TIM barrel domain D3093_RS01475 PF03952 Enolase, N-terminal domain D3093_RS01485 PF01171 PP-loop family D3093_RS01490 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS01490 PF01434 Peptidase family M41 D3093_RS01490 PF06480 FtsH Extracellular D3093_RS01490 PF17862 AAA+ lid domain D3093_RS01505 PF08534 Redoxin D3093_RS01510 PF00221 Aromatic amino acid lyase D3093_RS01515 PF00005 ABC transporter D3093_RS01515 PF00664 ABC transporter transmembrane region D3093_RS01520 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS01520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS01525 PF00072 Response regulator receiver domain D3093_RS01525 PF00196 Bacterial regulatory proteins, luxR family D3093_RS01540 PF12697 Alpha/beta hydrolase family D3093_RS01545 PF03023 Lipid II flippase MurJ D3093_RS01555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3093_RS01560 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D3093_RS01565 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS01585 PF00005 ABC transporter D3093_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS01600 PF03960 ArsC family D3093_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS01605 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS01605 PF00072 Response regulator receiver domain D3093_RS01605 PF08448 PAS fold D3093_RS01605 PF13188 PAS domain D3093_RS01610 PF00072 Response regulator receiver domain D3093_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS01615 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS01615 PF08448 PAS fold D3093_RS01615 PF00072 Response regulator receiver domain D3093_RS01615 PF13188 PAS domain D3093_RS01620 PF00486 Transcriptional regulatory protein, C terminal D3093_RS01620 PF00072 Response regulator receiver domain D3093_RS01655 PF13426 PAS domain D3093_RS01655 PF08448 PAS fold D3093_RS01655 PF08447 PAS fold D3093_RS01655 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS01655 PF00563 EAL domain D3093_RS01655 PF05231 MASE1 D3093_RS01670 PF03091 CutA1 divalent ion tolerance protein D3093_RS01690 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS01700 PF00572 Ribosomal protein L13 D3093_RS01705 PF00380 Ribosomal protein S9/S16 D3093_RS01710 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3093_RS01710 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3093_RS01715 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS01720 PF00691 OmpA family D3093_RS01725 PF00561 alpha/beta hydrolase fold D3093_RS01725 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D3093_RS01735 PF01047 MarR family D3093_RS01740 PF07690 Major Facilitator Superfamily D3093_RS01745 PF00155 Aminotransferase class I and II D3093_RS01750 PF01842 ACT domain D3093_RS01750 PF00742 Homoserine dehydrogenase D3093_RS01750 PF03447 Homoserine dehydrogenase, NAD binding domain D3093_RS01755 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D3093_RS01760 PF00465 Iron-containing alcohol dehydrogenase D3093_RS01790 PF02272 DHHA1 domain D3093_RS01790 PF01368 DHH family D3093_RS01790 PF17768 RecJ OB domain D3093_RS01790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain D3093_RS01800 PF00248 Aldo/keto reductase family D3093_RS01810 PF07690 Major Facilitator Superfamily D3093_RS01815 PF00850 Histone deacetylase domain D3093_RS01825 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3093_RS01825 PF02558 Ketopantoate reductase PanE/ApbA D3093_RS01830 PF00571 CBS domain D3093_RS01835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3093_RS01835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3093_RS01840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D3093_RS01845 PF02233 NAD(P) transhydrogenase beta subunit D3093_RS01850 PF00571 CBS domain D3093_RS01855 PF00392 Bacterial regulatory proteins, gntR family D3093_RS01855 PF07729 FCD domain D3093_RS01860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS01860 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS01860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS01865 PF02515 CoA-transferase family III D3093_RS01870 PF00549 CoA-ligase D3093_RS01870 PF08442 ATP-grasp domain D3093_RS01875 PF00549 CoA-ligase D3093_RS01875 PF02629 CoA binding domain D3093_RS01885 PF07690 Major Facilitator Superfamily D3093_RS01895 PF01964 Radical SAM ThiC family D3093_RS01895 PF13667 ThiC-associated domain D3093_RS01900 PF07690 Major Facilitator Superfamily D3093_RS01905 PF13660 Domain of unknown function (DUF4147) D3093_RS01905 PF05161 MOFRL family D3093_RS01910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS01910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS01915 PF01261 Xylose isomerase-like TIM barrel D3093_RS01920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS01920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS01920 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS01925 PF02581 Thiamine monophosphate synthase D3093_RS01925 PF02110 Hydroxyethylthiazole kinase family D3093_RS01930 PF07729 FCD domain D3093_RS01930 PF00392 Bacterial regulatory proteins, gntR family D3093_RS01935 PF00224 Pyruvate kinase, barrel domain D3093_RS01935 PF02887 Pyruvate kinase, alpha/beta domain D3093_RS01945 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS01945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3093_RS01945 PF00391 PEP-utilising enzyme, mobile domain D3093_RS01960 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS01970 PF18024 Helix-turn-helix domain D3093_RS01970 PF00158 Sigma-54 interaction domain D3093_RS01975 PF01266 FAD dependent oxidoreductase D3093_RS01985 PF01965 DJ-1/PfpI family D3093_RS01990 PF00196 Bacterial regulatory proteins, luxR family D3093_RS01990 PF00072 Response regulator receiver domain D3093_RS01995 PF00196 Bacterial regulatory proteins, luxR family D3093_RS01995 PF00072 Response regulator receiver domain D3093_RS02000 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS02000 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS02005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS02005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS02010 PF01774 UreD urease accessory protein D3093_RS02015 PF00547 Urease, gamma subunit D3093_RS02020 PF00699 Urease beta subunit D3093_RS02025 PF00449 Urease alpha-subunit, N-terminal domain D3093_RS02025 PF01979 Amidohydrolase family D3093_RS02030 PF01177 Asp/Glu/Hydantoin racemase D3093_RS02035 PF02814 UreE urease accessory protein, N-terminal domain D3093_RS02035 PF05194 UreE urease accessory protein, C-terminal domain D3093_RS02040 PF01730 UreF D3093_RS02045 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3093_RS02050 PF09557 Domain of unknown function (DUF2382) D3093_RS02050 PF05239 PRC-barrel domain D3093_RS02075 PF01022 Bacterial regulatory protein, arsR family D3093_RS02100 PF00535 Glycosyl transferase family 2 D3093_RS02105 PF01381 Helix-turn-helix D3093_RS02125 PF00795 Carbon-nitrogen hydrolase D3093_RS02140 PF01895 PhoU domain D3093_RS02160 PF13180 PDZ domain D3093_RS02165 PF00535 Glycosyl transferase family 2 D3093_RS02185 PF00480 ROK family D3093_RS02195 PF02653 Branched-chain amino acid transport system / permease component D3093_RS02200 PF11862 Domain of unknown function (DUF3382) D3093_RS02200 PF02653 Branched-chain amino acid transport system / permease component D3093_RS02205 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS02205 PF00005 ABC transporter D3093_RS02210 PF00005 ABC transporter D3093_RS02220 PF13458 Periplasmic binding protein D3093_RS02235 PF00691 OmpA family D3093_RS02240 PF00196 Bacterial regulatory proteins, luxR family D3093_RS02240 PF00072 Response regulator receiver domain D3093_RS02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS02245 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS02245 PF01627 Hpt domain D3093_RS02245 PF00072 Response regulator receiver domain D3093_RS02245 PF00672 HAMP domain D3093_RS02250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS02250 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D3093_RS02250 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D3093_RS02250 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D3093_RS02250 PF10371 Domain of unknown function D3093_RS02260 PF00849 RNA pseudouridylate synthase D3093_RS02270 PF05681 Fumarate hydratase (Fumerase) D3093_RS02270 PF05683 Fumarase C-terminus D3093_RS02275 PF00550 Phosphopantetheine attachment site D3093_RS02275 PF13193 AMP-binding enzyme C-terminal domain D3093_RS02275 PF00501 AMP-binding enzyme D3093_RS02320 PF02151 UvrB/uvrC motif D3093_RS02320 PF01541 GIY-YIG catalytic domain D3093_RS02320 PF08459 UvrC Helix-hairpin-helix N-terminal D3093_RS02320 PF12826 Helix-hairpin-helix motif D3093_RS02325 PF01066 CDP-alcohol phosphatidyltransferase D3093_RS02330 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D3093_RS02335 PF00994 Probable molybdopterin binding domain D3093_RS02335 PF03454 MoeA C-terminal region (domain IV) D3093_RS02335 PF03453 MoeA N-terminal region (domain I and II) D3093_RS02340 PF02597 ThiS family D3093_RS02345 PF02391 MoaE protein D3093_RS02355 PF01810 LysE type translocator D3093_RS02380 PF00140 Sigma-70 factor, region 1.2 D3093_RS02380 PF04542 Sigma-70 region 2 D3093_RS02380 PF04545 Sigma-70, region 4 D3093_RS02390 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS02395 PF00216 Bacterial DNA-binding protein D3093_RS02400 PF03741 Integral membrane protein TerC family D3093_RS02430 PF01266 FAD dependent oxidoreductase D3093_RS02435 PF00120 Glutamine synthetase, catalytic domain D3093_RS02440 PF13416 Bacterial extracellular solute-binding protein D3093_RS02445 PF08402 TOBE domain D3093_RS02445 PF00005 ABC transporter D3093_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS02460 PF04371 Porphyromonas-type peptidyl-arginine deiminase D3093_RS02485 PF03099 Biotin/lipoate A/B protein ligase family D3093_RS02485 PF12706 Beta-lactamase superfamily domain D3093_RS02490 PF01026 TatD related DNase D3093_RS02495 PF09334 tRNA synthetases class I (M) D3093_RS02495 PF08264 Anticodon-binding domain of tRNA D3093_RS02500 PF09115 DNA polymerase III, delta subunit, C terminal D3093_RS02505 PF02223 Thymidylate kinase D3093_RS02510 PF00768 D-alanyl-D-alanine carboxypeptidase D3093_RS02510 PF07943 Penicillin-binding protein 5, C-terminal domain D3093_RS02515 PF05036 Sporulation related domain D3093_RS02515 PF03330 Lytic transglycolase D3093_RS02525 PF00672 HAMP domain D3093_RS02525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS02530 PF08264 Anticodon-binding domain of tRNA D3093_RS02530 PF10458 Valyl tRNA synthetase tRNA binding arm D3093_RS02530 PF00133 tRNA synthetases class I (I, L, M and V) D3093_RS02540 PF02321 Outer membrane efflux protein D3093_RS02575 PF00595 PDZ domain D3093_RS02575 PF13180 PDZ domain D3093_RS02580 PF00293 NUDIX domain D3093_RS02585 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS02585 PF00571 CBS domain D3093_RS02590 PF02272 DHHA1 domain D3093_RS02590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3093_RS02590 PF01411 tRNA synthetases class II (A) D3093_RS02595 PF00581 Rhodanese-like domain D3093_RS02615 PF00155 Aminotransferase class I and II D3093_RS02620 PF00005 ABC transporter D3093_RS02625 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS02635 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS02640 PF01053 Cys/Met metabolism PLP-dependent enzyme D3093_RS02645 PF01502 Phosphoribosyl-AMP cyclohydrolase D3093_RS02690 PF00850 Histone deacetylase domain D3093_RS02720 PF16868 NMT1-like family D3093_RS02725 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS02725 PF01799 [2Fe-2S] binding domain D3093_RS02730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS02730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS02735 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS02735 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS02755 PF13478 XdhC Rossmann domain D3093_RS02755 PF02625 XdhC and CoxI family D3093_RS02760 PF02348 Cytidylyltransferase D3093_RS02765 PF00117 Glutamine amidotransferase class-I D3093_RS02770 PF02872 5'-nucleotidase, C-terminal domain D3093_RS02770 PF00149 Calcineurin-like phosphoesterase D3093_RS02780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3093_RS02780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D3093_RS02795 PF02653 Branched-chain amino acid transport system / permease component D3093_RS02805 PF00005 ABC transporter D3093_RS02810 PF00005 ABC transporter D3093_RS02810 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS02815 PF12802 MarR family D3093_RS02820 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS02825 PF00781 Diacylglycerol kinase catalytic domain D3093_RS02830 PF00149 Calcineurin-like phosphoesterase D3093_RS02835 PF00490 Delta-aminolevulinic acid dehydratase D3093_RS02840 PF01161 Phosphatidylethanolamine-binding protein D3093_RS02850 PF05175 Methyltransferase small domain D3093_RS02850 PF08468 Methyltransferase small domain N-terminal D3093_RS02855 PF01668 SmpB protein D3093_RS02860 PF00701 Dihydrodipicolinate synthetase family D3093_RS02865 PF01464 Transglycosylase SLT domain D3093_RS02875 PF02618 YceG-like family D3093_RS02880 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS02880 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS02885 PF00550 Phosphopantetheine attachment site D3093_RS02895 PF00698 Acyl transferase domain D3093_RS02900 PF01250 Ribosomal protein S6 D3093_RS02905 PF01084 Ribosomal protein S18 D3093_RS02915 PF03948 Ribosomal protein L9, C-terminal domain D3093_RS02915 PF01281 Ribosomal protein L9, N-terminal domain D3093_RS02930 PF00772 DnaB-like helicase N terminal domain D3093_RS02930 PF03796 DnaB-like helicase C terminal domain D3093_RS02935 PF00842 Alanine racemase, C-terminal domain D3093_RS02935 PF01168 Alanine racemase, N-terminal domain D3093_RS02940 PF02405 Permease MlaE D3093_RS02945 PF00005 ABC transporter D3093_RS02960 PF00557 Metallopeptidase family M24 D3093_RS02965 PF06745 KaiC D3093_RS02965 PF18073 Rubredoxin metal binding domain D3093_RS02975 PF13537 Glutamine amidotransferase domain D3093_RS02975 PF00156 Phosphoribosyl transferase domain D3093_RS02985 PF01926 50S ribosome-binding GTPase D3093_RS02985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D3093_RS03005 PF00072 Response regulator receiver domain D3093_RS03005 PF00196 Bacterial regulatory proteins, luxR family D3093_RS03015 PF00196 Bacterial regulatory proteins, luxR family D3093_RS03015 PF00072 Response regulator receiver domain D3093_RS03030 PF02705 K+ potassium transporter D3093_RS03040 PF01627 Hpt domain D3093_RS03040 PF00072 Response regulator receiver domain D3093_RS03040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS03040 PF00672 HAMP domain D3093_RS03040 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS03045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS03050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS03050 PF08447 PAS fold D3093_RS03055 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS03060 PF00155 Aminotransferase class I and II D3093_RS03065 PF03186 CobD/Cbib protein D3093_RS03070 PF03435 Saccharopine dehydrogenase NADP binding domain D3093_RS03070 PF16653 Saccharopine dehydrogenase C-terminal domain D3093_RS03085 PF03079 ARD/ARD' family D3093_RS03090 PF07690 Major Facilitator Superfamily D3093_RS03105 PF13411 MerR HTH family regulatory protein D3093_RS03110 PF13193 AMP-binding enzyme C-terminal domain D3093_RS03110 PF00501 AMP-binding enzyme D3093_RS03130 PF00005 ABC transporter D3093_RS03140 PF00005 ABC transporter D3093_RS03150 PF00009 Elongation factor Tu GTP binding domain D3093_RS03155 PF01507 Phosphoadenosine phosphosulfate reductase family D3093_RS03160 PF01507 Phosphoadenosine phosphosulfate reductase family D3093_RS03165 PF14824 Sirohaem biosynthesis protein central D3093_RS03165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS03165 PF10414 Sirohaem synthase dimerisation region D3093_RS03170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS03180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3093_RS03180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3093_RS03195 PF00999 Sodium/hydrogen exchanger family D3093_RS03195 PF02254 TrkA-N domain D3093_RS03205 PF13411 MerR HTH family regulatory protein D3093_RS03210 PF00216 Bacterial DNA-binding protein D3093_RS03215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3093_RS03215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3093_RS03220 PF02504 Fatty acid synthesis protein D3093_RS03225 PF01783 Ribosomal L32p protein family D3093_RS03245 PF03030 Inorganic H+ pyrophosphatase D3093_RS03255 PF02769 AIR synthase related protein, C-terminal domain D3093_RS03255 PF00586 AIR synthase related protein, N-terminal domain D3093_RS03260 PF01029 NusB family D3093_RS03265 PF00885 6,7-dimethyl-8-ribityllumazine synthase D3093_RS03270 PF00925 GTP cyclohydrolase II D3093_RS03270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3093_RS03275 PF00677 Lumazine binding domain D3093_RS03280 PF01872 RibD C-terminal domain D3093_RS03280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3093_RS03285 PF03477 ATP cone domain D3093_RS03290 PF00464 Serine hydroxymethyltransferase D3093_RS03295 PF02502 Ribose/Galactose Isomerase D3093_RS03300 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS03315 PF05974 Domain of unknown function (DUF892) D3093_RS03335 PF13673 Acetyltransferase (GNAT) domain D3093_RS03345 PF04675 DNA ligase N terminus D3093_RS03345 PF01068 ATP dependent DNA ligase domain D3093_RS03345 PF04679 ATP dependent DNA ligase C terminal region D3093_RS03355 PF04227 Indigoidine synthase A like protein D3093_RS03365 PF01048 Phosphorylase superfamily D3093_RS03385 PF00679 Elongation factor G C-terminus D3093_RS03385 PF00009 Elongation factor Tu GTP binding domain D3093_RS03385 PF03144 Elongation factor Tu domain 2 D3093_RS03420 PF00027 Cyclic nucleotide-binding domain D3093_RS03420 PF00325 Bacterial regulatory proteins, crp family D3093_RS03430 PF00027 Cyclic nucleotide-binding domain D3093_RS03430 PF13545 Crp-like helix-turn-helix domain D3093_RS03440 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D3093_RS03445 PF02797 Chalcone and stilbene synthases, C-terminal domain D3093_RS03445 PF00195 Chalcone and stilbene synthases, N-terminal domain D3093_RS03455 PF00270 DEAD/DEAH box helicase D3093_RS03455 PF17191 RecG wedge domain D3093_RS03455 PF00271 Helicase conserved C-terminal domain D3093_RS03460 PF07685 CobB/CobQ-like glutamine amidotransferase domain D3093_RS03460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3093_RS03465 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D3093_RS03465 PF12557 Cob(I)alamin adenosyltransferase N terminal D3093_RS03470 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D3093_RS03500 PF00472 RF-1 domain D3093_RS03520 PF17757 UvrB interaction domain D3093_RS03520 PF02559 CarD-like/TRCF domain D3093_RS03520 PF00270 DEAD/DEAH box helicase D3093_RS03520 PF00271 Helicase conserved C-terminal domain D3093_RS03520 PF03461 TRCF domain D3093_RS03535 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS03545 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS03545 PF12867 DinB superfamily D3093_RS03565 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS03565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3093_RS03570 PF05067 Manganese containing catalase D3093_RS03575 PF07690 Major Facilitator Superfamily D3093_RS03580 PF01474 Class-II DAHP synthetase family D3093_RS03590 PF00171 Aldehyde dehydrogenase family D3093_RS03595 PF02569 Pantoate-beta-alanine ligase D3093_RS03625 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS03630 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS03630 PF12804 MobA-like NTP transferase domain D3093_RS03630 PF14602 Hexapeptide repeat of succinyl-transferase D3093_RS03635 PF01380 SIS domain D3093_RS03640 PF01979 Amidohydrolase family D3093_RS03655 PF00005 ABC transporter D3093_RS03665 PF09084 NMT1/THI5 like D3093_RS03675 PF01594 AI-2E family transporter D3093_RS03680 PF00873 AcrB/AcrD/AcrF family D3093_RS03690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS03695 PF00871 Acetokinase family D3093_RS03700 PF01515 Phosphate acetyl/butaryl transferase D3093_RS03710 PF11339 Protein of unknown function (DUF3141) D3093_RS03725 PF13427 Domain of unknown function (DUF4111) D3093_RS03725 PF01909 Nucleotidyltransferase domain D3093_RS03755 PF03976 Polyphosphate kinase 2 (PPK2) D3093_RS03795 PF00239 Resolvase, N terminal domain D3093_RS03865 PF05951 Bacterial protein of unknown function (DUF882) D3093_RS03875 PF00301 Rubredoxin D3093_RS03890 PF01734 Patatin-like phospholipase D3093_RS03895 PF18125 RlmM ferredoxin-like domain D3093_RS03895 PF01728 FtsJ-like methyltransferase D3093_RS03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS03915 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS03920 PF00072 Response regulator receiver domain D3093_RS03920 PF00196 Bacterial regulatory proteins, luxR family D3093_RS03925 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS03925 PF00989 PAS fold D3093_RS03930 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS03935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS03940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS03945 PF03831 PhnA domain D3093_RS03945 PF08274 PhnA Zinc-Ribbon D3093_RS03950 PF08269 Cache domain D3093_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS03960 PF01568 Molydopterin dinucleotide binding domain D3093_RS03960 PF00384 Molybdopterin oxidoreductase D3093_RS03960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS03965 PF03060 Nitronate monooxygenase D3093_RS03970 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS03985 PF00809 Pterin binding enzyme D3093_RS03985 PF02310 B12 binding domain D3093_RS03985 PF02965 Vitamin B12 dependent methionine synthase, activation domain D3093_RS03985 PF02574 Homocysteine S-methyltransferase D3093_RS03985 PF02607 B12 binding domain D3093_RS03995 PF02219 Methylenetetrahydrofolate reductase D3093_RS04000 PF13847 Methyltransferase domain D3093_RS04000 PF03551 Transcriptional regulator PadR-like family D3093_RS04005 PF04333 MlaA lipoprotein D3093_RS04020 PF12848 ABC transporter D3093_RS04020 PF00005 ABC transporter D3093_RS04025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D3093_RS04030 PF00929 Exonuclease D3093_RS04050 PF00210 Ferritin-like domain D3093_RS04055 PF02446 4-alpha-glucanotransferase D3093_RS04060 PF00072 Response regulator receiver domain D3093_RS04060 PF00486 Transcriptional regulatory protein, C terminal D3093_RS04065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3093_RS04065 PF00128 Alpha amylase, catalytic domain D3093_RS04080 PF02806 Alpha amylase, C-terminal all-beta domain D3093_RS04080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3093_RS04080 PF00128 Alpha amylase, catalytic domain D3093_RS04085 PF16657 Maltogenic Amylase, C-terminal domain D3093_RS04085 PF00128 Alpha amylase, catalytic domain D3093_RS04100 PF00459 Inositol monophosphatase family D3093_RS04105 PF04305 Protein of unknown function (DUF455) D3093_RS04120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS04120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS04120 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS04130 PF00501 AMP-binding enzyme D3093_RS04130 PF13193 AMP-binding enzyme C-terminal domain D3093_RS04135 PF00325 Bacterial regulatory proteins, crp family D3093_RS04135 PF00027 Cyclic nucleotide-binding domain D3093_RS04140 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS04145 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS04170 PF01389 OmpA-like transmembrane domain D3093_RS04170 PF00691 OmpA family D3093_RS04190 PF00027 Cyclic nucleotide-binding domain D3093_RS04190 PF13545 Crp-like helix-turn-helix domain D3093_RS04200 PF12802 MarR family D3093_RS04205 PF00561 alpha/beta hydrolase fold D3093_RS04220 PF01209 ubiE/COQ5 methyltransferase family D3093_RS04235 PF13614 AAA domain D3093_RS04245 PF00270 DEAD/DEAH box helicase D3093_RS04245 PF08494 DEAD/H associated D3093_RS04245 PF00271 Helicase conserved C-terminal domain D3093_RS04255 PF02469 Fasciclin domain D3093_RS04260 PF03441 FAD binding domain of DNA photolyase D3093_RS04260 PF00875 DNA photolyase D3093_RS04270 PF01475 Ferric uptake regulator family D3093_RS04275 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3093_RS04275 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3093_RS04290 PF03600 Citrate transporter D3093_RS04295 PF12706 Beta-lactamase superfamily domain D3093_RS04305 PF12729 Four helix bundle sensory module for signal transduction D3093_RS04305 PF00672 HAMP domain D3093_RS04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS04310 PF17200 Single Cache domain 2 D3093_RS04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS04310 PF00672 HAMP domain D3093_RS04315 PF01545 Cation efflux family D3093_RS04315 PF16916 Dimerisation domain of Zinc Transporter D3093_RS04320 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D3093_RS04320 PF01243 Pyridoxamine 5'-phosphate oxidase D3093_RS04325 PF16998 17 kDa outer membrane surface antigen D3093_RS04325 PF05433 Glycine zipper 2TM domain D3093_RS04330 PF01556 DnaJ C terminal domain D3093_RS04330 PF00684 DnaJ central domain D3093_RS04330 PF00226 DnaJ domain D3093_RS04335 PF01434 Peptidase family M41 D3093_RS04335 PF06480 FtsH Extracellular D3093_RS04335 PF17862 AAA+ lid domain D3093_RS04335 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS04350 PF00072 Response regulator receiver domain D3093_RS04350 PF00486 Transcriptional regulatory protein, C terminal D3093_RS04355 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS04360 PF09345 Domain of unknown function (DUF1987) D3093_RS04370 PF11849 Domain of unknown function (DUF3369) D3093_RS04390 PF00893 Small Multidrug Resistance protein D3093_RS04400 PF02566 OsmC-like protein D3093_RS04410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3093_RS04420 PF00892 EamA-like transporter family D3093_RS04425 PF13537 Glutamine amidotransferase domain D3093_RS04425 PF00733 Asparagine synthase D3093_RS04435 PF01370 NAD dependent epimerase/dehydratase family D3093_RS04440 PF13477 Glycosyl transferase 4-like D3093_RS04440 PF00534 Glycosyl transferases group 1 D3093_RS04445 PF00953 Glycosyl transferase family 4 D3093_RS04450 PF01370 NAD dependent epimerase/dehydratase family D3093_RS04455 PF02719 Polysaccharide biosynthesis protein D3093_RS04465 PF00691 OmpA family D3093_RS04470 PF04052 TolB amino-terminal domain D3093_RS04470 PF07676 WD40-like Beta Propeller Repeat D3093_RS04480 PF02472 Biopolymer transport protein ExbD/TolR D3093_RS04485 PF01618 MotA/TolQ/ExbB proton channel family D3093_RS04490 PF03061 Thioesterase superfamily D3093_RS04495 PF17864 RuvB AAA lid domain D3093_RS04495 PF05496 Holliday junction DNA helicase RuvB P-loop domain D3093_RS04495 PF05491 RuvB C-terminal winged helix domain D3093_RS04500 PF01330 RuvA N terminal domain D3093_RS04500 PF07499 RuvA, C-terminal domain D3093_RS04510 PF01709 Transcriptional regulator D3093_RS04515 PF13277 YmdB-like protein D3093_RS04520 PF01812 5-formyltetrahydrofolate cyclo-ligase family D3093_RS04540 PF02779 Transketolase, pyrimidine binding domain D3093_RS04540 PF02780 Transketolase, C-terminal domain D3093_RS04540 PF00456 Transketolase, thiamine diphosphate binding domain D3093_RS04545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3093_RS04545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3093_RS04565 PF01791 DeoC/LacD family aldolase D3093_RS04570 PF02581 Thiamine monophosphate synthase D3093_RS04575 PF01925 Sulfite exporter TauE/SafE D3093_RS04580 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D3093_RS04585 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS04585 PF00107 Zinc-binding dehydrogenase D3093_RS04590 PF00152 tRNA synthetases class II (D, K and N) D3093_RS04595 PF01132 Elongation factor P (EF-P) OB domain D3093_RS04595 PF08207 Elongation factor P (EF-P) KOW-like domain D3093_RS04595 PF09285 Elongation factor P, C-terminal D3093_RS04600 PF00459 Inositol monophosphatase family D3093_RS04615 PF00691 OmpA family D3093_RS04615 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3093_RS04620 PF00665 Integrase core domain D3093_RS04620 PF13936 Helix-turn-helix domain D3093_RS04625 PF00266 Aminotransferase class-V D3093_RS04630 PF02347 Glycine cleavage system P-protein D3093_RS04635 PF01597 Glycine cleavage H-protein D3093_RS04640 PF01571 Aminomethyltransferase folate-binding domain D3093_RS04640 PF08669 Glycine cleavage T-protein C-terminal barrel domain D3093_RS04655 PF02401 LytB protein D3093_RS04665 PF01636 Phosphotransferase enzyme family D3093_RS04670 PF00075 RNase H D3093_RS04675 PF00501 AMP-binding enzyme D3093_RS04675 PF13193 AMP-binding enzyme C-terminal domain D3093_RS04680 PF08534 Redoxin D3093_RS04685 PF11412 Disulphide bond corrector protein DsbC D3093_RS04685 PF02683 Cytochrome C biogenesis protein transmembrane region D3093_RS04690 PF02622 Uncharacterized ACR, COG1678 D3093_RS04700 PF13302 Acetyltransferase (GNAT) domain D3093_RS04705 PF05193 Peptidase M16 inactive domain D3093_RS04705 PF00675 Insulinase (Peptidase family M16) D3093_RS04710 PF14821 Threonine synthase N terminus D3093_RS04710 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS04715 PF00150 Cellulase (glycosyl hydrolase family 5) D3093_RS04720 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D3093_RS04725 PF02104 SURF1 family D3093_RS04735 PF00510 Cytochrome c oxidase subunit III D3093_RS04740 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D3093_RS04745 PF01040 UbiA prenyltransferase family D3093_RS04750 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3093_RS04755 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3093_RS04755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3093_RS04765 PF01523 Putative modulator of DNA gyrase D3093_RS04775 PF06082 Exopolysaccharide biosynthesis protein YbjH D3093_RS04785 PF07043 Protein of unknown function (DUF1328) D3093_RS04790 PF04542 Sigma-70 region 2 D3093_RS04790 PF08281 Sigma-70, region 4 D3093_RS04795 PF01464 Transglycosylase SLT domain D3093_RS04810 PF01212 Beta-eliminating lyase D3093_RS04820 PF00849 RNA pseudouridylate synthase D3093_RS04825 PF00140 Sigma-70 factor, region 1.2 D3093_RS04825 PF04542 Sigma-70 region 2 D3093_RS04825 PF04545 Sigma-70, region 4 D3093_RS04835 PF00069 Protein kinase domain D3093_RS04840 PF00709 Adenylosuccinate synthetase D3093_RS04845 PF13393 Histidyl-tRNA synthetase D3093_RS04855 PF02386 Cation transport protein D3093_RS04870 PF04055 Radical SAM superfamily D3093_RS04870 PF06463 Molybdenum Cofactor Synthesis C D3093_RS04875 PF03631 Virulence factor BrkB D3093_RS04890 PF01548 Transposase D3093_RS04890 PF02371 Transposase IS116/IS110/IS902 family D3093_RS04900 PF01264 Chorismate synthase D3093_RS04910 PF00486 Transcriptional regulatory protein, C terminal D3093_RS04910 PF00072 Response regulator receiver domain D3093_RS04920 PF01343 Peptidase family S49 D3093_RS04930 PF01339 CheB methylesterase D3093_RS04930 PF01739 CheR methyltransferase, SAM binding domain D3093_RS04930 PF03705 CheR methyltransferase, all-alpha domain D3093_RS04930 PF08448 PAS fold D3093_RS04935 PF01627 Hpt domain D3093_RS04935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS04935 PF00989 PAS fold D3093_RS04935 PF00072 Response regulator receiver domain D3093_RS04935 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS04935 PF18415 Histidine kinase receptor ArcB trans-membrane domain D3093_RS04945 PF03649 Uncharacterised protein family (UPF0014) D3093_RS04950 PF00005 ABC transporter D3093_RS04955 PF07690 Major Facilitator Superfamily D3093_RS04960 PF01594 AI-2E family transporter D3093_RS04965 PF00672 HAMP domain D3093_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS04965 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS04970 PF00072 Response regulator receiver domain D3093_RS04970 PF00486 Transcriptional regulatory protein, C terminal D3093_RS04975 PF13180 PDZ domain D3093_RS04985 PF00009 Elongation factor Tu GTP binding domain D3093_RS04985 PF03764 Elongation factor G, domain IV D3093_RS04985 PF14492 Elongation Factor G, domain II D3093_RS04985 PF00679 Elongation factor G C-terminus D3093_RS04985 PF03144 Elongation factor Tu domain 2 D3093_RS04990 PF01042 Endoribonuclease L-PSP D3093_RS05000 PF01131 DNA topoisomerase D3093_RS05000 PF01751 Toprim domain D3093_RS05020 PF00535 Glycosyl transferase family 2 D3093_RS05020 PF03170 Bacterial cellulose synthase subunit D3093_RS05020 PF07238 PilZ domain D3093_RS05030 PF00730 HhH-GPD superfamily base excision DNA repair protein D3093_RS05030 PF00633 Helix-hairpin-helix motif D3093_RS05030 PF10576 Iron-sulfur binding domain of endonuclease III D3093_RS05040 PF00271 Helicase conserved C-terminal domain D3093_RS05040 PF00176 SNF2 family N-terminal domain D3093_RS05040 PF04434 SWIM zinc finger D3093_RS05065 PF04539 Sigma-70 region 3 D3093_RS05065 PF04546 Sigma-70, non-essential region D3093_RS05065 PF03979 Sigma-70 factor, region 1.1 D3093_RS05065 PF04545 Sigma-70, region 4 D3093_RS05065 PF04542 Sigma-70 region 2 D3093_RS05065 PF00140 Sigma-70 factor, region 1.2 D3093_RS05070 PF08278 DNA primase DnaG DnaB-binding D3093_RS05070 PF01807 CHC2 zinc finger D3093_RS05070 PF08275 DNA primase catalytic core, N-terminal domain D3093_RS05070 PF10410 DnaB-helicase binding domain of primase D3093_RS05070 PF13662 Toprim domain D3093_RS05080 PF00117 Glutamine amidotransferase class-I D3093_RS05080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3093_RS05085 PF08448 PAS fold D3093_RS05085 PF13188 PAS domain D3093_RS05085 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS05085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS05085 PF00072 Response regulator receiver domain D3093_RS05105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS05105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS05110 PF03960 ArsC family D3093_RS05115 PF05175 Methyltransferase small domain D3093_RS05120 PF00814 Glycoprotease family D3093_RS05120 PF00583 Acetyltransferase (GNAT) family D3093_RS05130 PF01066 CDP-alcohol phosphatidyltransferase D3093_RS05135 PF02666 Phosphatidylserine decarboxylase D3093_RS05155 PF03641 Possible lysine decarboxylase D3093_RS05160 PF00180 Isocitrate/isopropylmalate dehydrogenase D3093_RS05170 PF06055 Exopolysaccharide synthesis, ExoD D3093_RS05185 PF04542 Sigma-70 region 2 D3093_RS05185 PF08281 Sigma-70, region 4 D3093_RS05190 PF00180 Isocitrate/isopropylmalate dehydrogenase D3093_RS05190 PF18324 Hypothetical protein TT1725 D3093_RS05220 PF04607 Region found in RelA / SpoT proteins D3093_RS05220 PF13291 ACT domain D3093_RS05220 PF02824 TGS domain D3093_RS05225 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3093_RS05225 PF12801 4Fe-4S binding domain D3093_RS05225 PF13746 4Fe-4S dicluster domain D3093_RS05240 PF13291 ACT domain D3093_RS05240 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS05255 PF01411 tRNA synthetases class II (A) D3093_RS05255 PF02272 DHHA1 domain D3093_RS05255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3093_RS05260 PF00154 recA bacterial DNA recombination protein D3093_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS05270 PF08448 PAS fold D3093_RS05270 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS05270 PF00072 Response regulator receiver domain D3093_RS05270 PF13188 PAS domain D3093_RS05275 PF01312 FlhB HrpN YscU SpaS Family D3093_RS05280 PF01311 Bacterial export proteins, family 1 D3093_RS05285 PF01313 Bacterial export proteins, family 3 D3093_RS05290 PF02049 Flagellar hook-basal body complex protein FliE D3093_RS05295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS05300 PF00460 Flagella basal body rod protein D3093_RS05305 PF01312 FlhB HrpN YscU SpaS Family D3093_RS05320 PF00813 FliP family D3093_RS05325 PF02705 K+ potassium transporter D3093_RS05340 PF00691 OmpA family D3093_RS05340 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3093_RS05370 PF02154 Flagellar motor switch protein FliM D3093_RS05370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3093_RS05380 PF00460 Flagella basal body rod protein D3093_RS05380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS05385 PF00460 Flagella basal body rod protein D3093_RS05385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS05395 PF02107 Flagellar L-ring protein D3093_RS05405 PF01258 Prokaryotic dksA/traR C4-type zinc finger D3093_RS05410 PF10768 Class II flagellar assembly regulator D3093_RS05415 PF02119 Flagellar P-ring protein D3093_RS05420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D3093_RS05420 PF10135 Rod binding protein D3093_RS05435 PF03963 Flagellar hook capping protein - N-terminal region D3093_RS05445 PF07977 FabA-like domain D3093_RS05460 PF13847 Methyltransferase domain D3093_RS05460 PF10119 Predicted methyltransferase regulatory domain D3093_RS05465 PF00005 ABC transporter D3093_RS05465 PF00664 ABC transporter transmembrane region D3093_RS05470 PF01197 Ribosomal protein L31 D3093_RS05480 PF00011 Hsp20/alpha crystallin family D3093_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS05485 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS05485 PF00989 PAS fold D3093_RS05485 PF13188 PAS domain D3093_RS05490 PF00561 alpha/beta hydrolase fold D3093_RS05490 PF00364 Biotin-requiring enzyme D3093_RS05495 PF01053 Cys/Met metabolism PLP-dependent enzyme D3093_RS05500 PF04107 Glutamate-cysteine ligase family 2(GCS2) D3093_RS05515 PF07729 FCD domain D3093_RS05515 PF00392 Bacterial regulatory proteins, gntR family D3093_RS05520 PF05191 Adenylate kinase, active site lid D3093_RS05525 PF00344 SecY translocase D3093_RS05530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D3093_RS05535 PF00327 Ribosomal protein L30p/L7e D3093_RS05540 PF03719 Ribosomal protein S5, C-terminal domain D3093_RS05540 PF00333 Ribosomal protein S5, N-terminal domain D3093_RS05545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D3093_RS05550 PF00347 Ribosomal protein L6 D3093_RS05555 PF00410 Ribosomal protein S8 D3093_RS05560 PF00253 Ribosomal protein S14p/S29e D3093_RS05565 PF00281 Ribosomal protein L5 D3093_RS05565 PF00673 ribosomal L5P family C-terminus D3093_RS05570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D3093_RS05570 PF00467 KOW motif D3093_RS05575 PF00238 Ribosomal protein L14p/L23e D3093_RS05580 PF00366 Ribosomal protein S17 D3093_RS05585 PF00831 Ribosomal L29 protein D3093_RS05590 PF00252 Ribosomal protein L16p/L10e D3093_RS05595 PF00189 Ribosomal protein S3, C-terminal domain D3093_RS05595 PF07650 KH domain D3093_RS05600 PF00237 Ribosomal protein L22p/L17e D3093_RS05605 PF00203 Ribosomal protein S19 D3093_RS05610 PF03947 Ribosomal Proteins L2, C-terminal domain D3093_RS05610 PF00181 Ribosomal Proteins L2, RNA binding domain D3093_RS05615 PF00276 Ribosomal protein L23 D3093_RS05620 PF00573 Ribosomal protein L4/L1 family D3093_RS05625 PF00297 Ribosomal protein L3 D3093_RS05630 PF00338 Ribosomal protein S10p/S20e D3093_RS05635 PF00009 Elongation factor Tu GTP binding domain D3093_RS05635 PF03144 Elongation factor Tu domain 2 D3093_RS05635 PF03143 Elongation factor Tu C-terminal domain D3093_RS05640 PF00009 Elongation factor Tu GTP binding domain D3093_RS05640 PF03144 Elongation factor Tu domain 2 D3093_RS05640 PF03764 Elongation factor G, domain IV D3093_RS05640 PF00679 Elongation factor G C-terminus D3093_RS05640 PF14492 Elongation Factor G, domain II D3093_RS05645 PF00177 Ribosomal protein S7p/S5e D3093_RS05650 PF00164 Ribosomal protein S12/S23 D3093_RS05655 PF01965 DJ-1/PfpI family D3093_RS05660 PF04997 RNA polymerase Rpb1, domain 1 D3093_RS05660 PF04983 RNA polymerase Rpb1, domain 3 D3093_RS05660 PF05000 RNA polymerase Rpb1, domain 4 D3093_RS05660 PF00623 RNA polymerase Rpb1, domain 2 D3093_RS05660 PF04998 RNA polymerase Rpb1, domain 5 D3093_RS05665 PF00562 RNA polymerase Rpb2, domain 6 D3093_RS05665 PF04563 RNA polymerase beta subunit D3093_RS05665 PF04561 RNA polymerase Rpb2, domain 2 D3093_RS05665 PF04560 RNA polymerase Rpb2, domain 7 D3093_RS05665 PF04565 RNA polymerase Rpb2, domain 3 D3093_RS05665 PF10385 RNA polymerase beta subunit external 1 domain D3093_RS05670 PF00542 Ribosomal protein L7/L12 C-terminal domain D3093_RS05670 PF16320 Ribosomal protein L7/L12 dimerisation domain D3093_RS05675 PF00466 Ribosomal protein L10 D3093_RS05680 PF00687 Ribosomal protein L1p/L10e family D3093_RS05685 PF00298 Ribosomal protein L11, RNA binding domain D3093_RS05685 PF03946 Ribosomal protein L11, N-terminal domain D3093_RS05690 PF00467 KOW motif D3093_RS05690 PF02357 Transcription termination factor nusG D3093_RS05705 PF03144 Elongation factor Tu domain 2 D3093_RS05705 PF03143 Elongation factor Tu C-terminal domain D3093_RS05705 PF00009 Elongation factor Tu GTP binding domain D3093_RS05720 PF00588 SpoU rRNA Methylase family D3093_RS05720 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3093_RS05755 PF13458 Periplasmic binding protein D3093_RS05765 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS05765 PF00005 ABC transporter D3093_RS05770 PF00005 ABC transporter D3093_RS05780 PF03633 Glycosyl hydrolase family 65, C-terminal domain D3093_RS05780 PF03636 Glycosyl hydrolase family 65, N-terminal domain D3093_RS05780 PF02358 Trehalose-phosphatase D3093_RS05780 PF03632 Glycosyl hydrolase family 65 central catalytic domain D3093_RS05785 PF01979 Amidohydrolase family D3093_RS05795 PF00480 ROK family D3093_RS05805 PF00672 HAMP domain D3093_RS05805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS05810 PF01546 Peptidase family M20/M25/M40 D3093_RS05810 PF07687 Peptidase dimerisation domain D3093_RS05815 PF00005 ABC transporter D3093_RS05820 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS05820 PF00005 ABC transporter D3093_RS05830 PF02653 Branched-chain amino acid transport system / permease component D3093_RS05850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS05850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3093_RS05860 PF00005 ABC transporter D3093_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS05875 PF17926 Tetracyclin repressor-like, C-terminal domain D3093_RS05875 PF00440 Bacterial regulatory proteins, tetR family D3093_RS05885 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS05905 PF13193 AMP-binding enzyme C-terminal domain D3093_RS05905 PF16177 Acetyl-coenzyme A synthetase N-terminus D3093_RS05905 PF00501 AMP-binding enzyme D3093_RS05910 PF00005 ABC transporter D3093_RS05940 PF03062 MBOAT, membrane-bound O-acyltransferase family D3093_RS05950 PF00905 Penicillin binding protein transpeptidase domain D3093_RS05950 PF00912 Transglycosylase D3093_RS05950 PF17092 Penicillin-binding protein OB-like domain D3093_RS05955 PF01520 N-acetylmuramoyl-L-alanine amidase D3093_RS05955 PF11741 AMIN domain D3093_RS05960 PF12111 Polyribonucleotide phosphorylase C terminal D3093_RS05960 PF10150 Ribonuclease E/G family D3093_RS05960 PF00575 S1 RNA binding domain D3093_RS05965 PF03449 Transcription elongation factor, N-terminal D3093_RS05965 PF01272 Transcription elongation factor, GreA/GreB, C-term D3093_RS05990 PF00155 Aminotransferase class I and II D3093_RS05995 PF04107 Glutamate-cysteine ligase family 2(GCS2) D3093_RS06000 PF04452 RNA methyltransferase D3093_RS06005 PF01040 UbiA prenyltransferase family D3093_RS06025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D3093_RS06055 PF00781 Diacylglycerol kinase catalytic domain D3093_RS06065 PF13439 Glycosyltransferase Family 4 D3093_RS06065 PF00534 Glycosyl transferases group 1 D3093_RS06075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D3093_RS06080 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D3093_RS06090 PF01810 LysE type translocator D3093_RS06115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D3093_RS06120 PF00445 Ribonuclease T2 family D3093_RS06125 PF00289 Biotin carboxylase, N-terminal domain D3093_RS06125 PF02785 Biotin carboxylase C-terminal domain D3093_RS06125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3093_RS06130 PF00364 Biotin-requiring enzyme D3093_RS06135 PF01220 Dehydroquinase class II D3093_RS06150 PF01545 Cation efflux family D3093_RS06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS06165 PF00672 HAMP domain D3093_RS06180 PF05951 Bacterial protein of unknown function (DUF882) D3093_RS06185 PF01471 Putative peptidoglycan binding domain D3093_RS06185 PF01520 N-acetylmuramoyl-L-alanine amidase D3093_RS06215 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06225 PF00128 Alpha amylase, catalytic domain D3093_RS06225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3093_RS06225 PF11941 Domain of unknown function (DUF3459) D3093_RS06235 PF13823 Alcohol dehydrogenase GroES-associated D3093_RS06235 PF00107 Zinc-binding dehydrogenase D3093_RS06235 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS06255 PF12146 Serine aminopeptidase, S33 D3093_RS06260 PF03788 LrgA family D3093_RS06265 PF04172 LrgB-like family D3093_RS06270 PF08502 LeuA allosteric (dimerisation) domain D3093_RS06270 PF00682 HMGL-like D3093_RS06275 PF05746 DALR anticodon binding domain D3093_RS06275 PF02092 Glycyl-tRNA synthetase beta subunit D3093_RS06290 PF01343 Peptidase family S49 D3093_RS06290 PF06965 Na+/H+ antiporter 1 D3093_RS06305 PF00348 Polyprenyl synthetase D3093_RS06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06330 PF00072 Response regulator receiver domain D3093_RS06330 PF13426 PAS domain D3093_RS06345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS06345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS06350 PF01565 FAD binding domain D3093_RS06350 PF02913 FAD linked oxidases, C-terminal domain D3093_RS06355 PF01968 Hydantoinase/oxoprolinase D3093_RS06355 PF05378 Hydantoinase/oxoprolinase N-terminal region D3093_RS06365 PF05099 Tellurite resistance protein TerB D3093_RS06365 PF00226 DnaJ domain D3093_RS06370 PF00005 ABC transporter D3093_RS06370 PF16326 ABC transporter C-terminal domain D3093_RS06380 PF01510 N-acetylmuramoyl-L-alanine amidase D3093_RS06400 PF02381 MraZ protein, putative antitoxin-like D3093_RS06405 PF01795 MraW methylase family D3093_RS06415 PF00905 Penicillin binding protein transpeptidase domain D3093_RS06415 PF03717 Penicillin-binding Protein dimerisation domain D3093_RS06420 PF02875 Mur ligase family, glutamate ligase domain D3093_RS06420 PF08245 Mur ligase middle domain D3093_RS06420 PF01225 Mur ligase family, catalytic domain D3093_RS06425 PF08245 Mur ligase middle domain D3093_RS06425 PF01225 Mur ligase family, catalytic domain D3093_RS06425 PF02875 Mur ligase family, glutamate ligase domain D3093_RS06430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D3093_RS06430 PF00953 Glycosyl transferase family 4 D3093_RS06435 PF08245 Mur ligase middle domain D3093_RS06440 PF01098 Cell cycle protein D3093_RS06445 PF04101 Glycosyltransferase family 28 C-terminal domain D3093_RS06445 PF03033 Glycosyltransferase family 28 N-terminal domain D3093_RS06455 PF01225 Mur ligase family, catalytic domain D3093_RS06455 PF02875 Mur ligase family, glutamate ligase domain D3093_RS06455 PF08245 Mur ligase middle domain D3093_RS06460 PF01565 FAD binding domain D3093_RS06460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D3093_RS06465 PF01820 D-ala D-ala ligase N-terminus D3093_RS06465 PF07478 D-ala D-ala ligase C-terminus D3093_RS06470 PF03799 Cell division protein FtsQ D3093_RS06470 PF08478 POTRA domain, FtsQ-type D3093_RS06475 PF02491 SHS2 domain inserted in FTSA D3093_RS06480 PF00091 Tubulin/FtsZ family, GTPase domain D3093_RS06480 PF12327 FtsZ family, C-terminal domain D3093_RS06485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D3093_RS06495 PF03120 NAD-dependent DNA ligase OB-fold domain D3093_RS06495 PF01653 NAD-dependent DNA ligase adenylation domain D3093_RS06495 PF00533 BRCA1 C Terminus (BRCT) domain D3093_RS06495 PF12826 Helix-hairpin-helix motif D3093_RS06495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D3093_RS06505 PF00672 HAMP domain D3093_RS06505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS06520 PF02463 RecF/RecN/SMC N terminal domain D3093_RS06525 PF13525 Outer membrane lipoprotein D3093_RS06540 PF00072 Response regulator receiver domain D3093_RS06545 PF01321 Creatinase/Prolidase N-terminal domain D3093_RS06545 PF00557 Metallopeptidase family M24 D3093_RS06545 PF00557 Metallopeptidase family M24 D3093_RS06545 PF01321 Creatinase/Prolidase N-terminal domain D3093_RS06570 PF13361 UvrD-like helicase C-terminal domain D3093_RS06570 PF00580 UvrD/REP helicase N-terminal domain D3093_RS06575 PF00196 Bacterial regulatory proteins, luxR family D3093_RS06575 PF00072 Response regulator receiver domain D3093_RS06580 PF00196 Bacterial regulatory proteins, luxR family D3093_RS06580 PF00072 Response regulator receiver domain D3093_RS06610 PF00571 CBS domain D3093_RS06620 PF00871 Acetokinase family D3093_RS06625 PF01515 Phosphate acetyl/butaryl transferase D3093_RS06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06630 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS06635 PF02954 Bacterial regulatory protein, Fis family D3093_RS06635 PF00072 Response regulator receiver domain D3093_RS06635 PF00158 Sigma-54 interaction domain D3093_RS06640 PF00989 PAS fold D3093_RS06640 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06650 PF01627 Hpt domain D3093_RS06650 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS06650 PF00672 HAMP domain D3093_RS06650 PF00072 Response regulator receiver domain D3093_RS06650 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06665 PF06463 Molybdenum Cofactor Synthesis C D3093_RS06665 PF04055 Radical SAM superfamily D3093_RS06670 PF01513 ATP-NAD kinase D3093_RS06680 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D3093_RS06685 PF05145 Transition state regulatory protein AbrB D3093_RS06695 PF01594 AI-2E family transporter D3093_RS06700 PF01145 SPFH domain / Band 7 family D3093_RS06700 PF16200 C-terminal region of band_7 D3093_RS06720 PF00072 Response regulator receiver domain D3093_RS06720 PF00486 Transcriptional regulatory protein, C terminal D3093_RS06740 PF00005 ABC transporter D3093_RS06745 PF08482 ATP-dependent helicase C-terminal D3093_RS06745 PF00271 Helicase conserved C-terminal domain D3093_RS06745 PF04408 Helicase associated domain (HA2) D3093_RS06745 PF00270 DEAD/DEAH box helicase D3093_RS06755 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS06755 PF00672 HAMP domain D3093_RS06760 PF04293 SpoVR like protein D3093_RS06765 PF04285 Protein of unknown function (DUF444) D3093_RS06770 PF08298 PrkA AAA domain D3093_RS06770 PF06798 PrkA serine protein kinase C-terminal domain D3093_RS06775 PF00072 Response regulator receiver domain D3093_RS06775 PF08769 Sporulation initiation factor Spo0A C terminal D3093_RS06785 PF00072 Response regulator receiver domain D3093_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS06785 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS06785 PF09308 LuxQ, periplasmic D3093_RS06790 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3093_RS06805 PF03232 Ubiquinone biosynthesis protein COQ7 D3093_RS06810 PF02600 Disulfide bond formation protein DsbB D3093_RS06825 PF00034 Cytochrome c D3093_RS06845 PF00005 ABC transporter D3093_RS06855 PF00196 Bacterial regulatory proteins, luxR family D3093_RS06855 PF00072 Response regulator receiver domain D3093_RS06860 PF13360 PQQ-like domain D3093_RS06860 PF01011 PQQ enzyme repeat D3093_RS06880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS06895 PF00005 ABC transporter D3093_RS06905 PF00795 Carbon-nitrogen hydrolase D3093_RS06905 PF02540 NAD synthase D3093_RS06910 PF00355 Rieske [2Fe-2S] domain D3093_RS06925 PF00144 Beta-lactamase D3093_RS06935 PF00535 Glycosyl transferase family 2 D3093_RS06940 PF08269 Cache domain D3093_RS06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS06955 PF02653 Branched-chain amino acid transport system / permease component D3093_RS06965 PF04055 Radical SAM superfamily D3093_RS06970 PF06508 Queuosine biosynthesis protein QueC D3093_RS06990 PF00005 ABC transporter D3093_RS06990 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS06995 PF00005 ABC transporter D3093_RS07010 PF00829 Ribosomal prokaryotic L21 protein D3093_RS07015 PF01016 Ribosomal L27 protein D3093_RS07025 PF00696 Amino acid kinase family D3093_RS07025 PF01472 PUA domain D3093_RS07030 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS07050 PF01925 Sulfite exporter TauE/SafE D3093_RS07055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS07055 PF00034 Cytochrome c D3093_RS07060 PF00171 Aldehyde dehydrogenase family D3093_RS07065 PF01467 Cytidylyltransferase-like D3093_RS07075 PF02590 Predicted SPOUT methyltransferase D3093_RS07080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D3093_RS07080 PF01676 Metalloenzyme superfamily D3093_RS07090 PF13180 PDZ domain D3093_RS07090 PF03572 Peptidase family S41 D3093_RS07100 PF00293 NUDIX domain D3093_RS07110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D3093_RS07115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3093_RS07115 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3093_RS07120 PF00231 ATP synthase D3093_RS07125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3093_RS07125 PF00306 ATP synthase alpha/beta chain, C terminal domain D3093_RS07125 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3093_RS07130 PF00213 ATP synthase delta (OSCP) subunit D3093_RS07145 PF17764 3′ DNA-binding domain (3′BD) D3093_RS07145 PF00270 DEAD/DEAH box helicase D3093_RS07145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D3093_RS07145 PF18074 Primosomal protein N C-terminal domain D3093_RS07150 PF00923 Transaldolase/Fructose-6-phosphate aldolase D3093_RS07160 PF00589 Phage integrase family D3093_RS07160 PF02899 Phage integrase, N-terminal SAM-like domain D3093_RS07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS07165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3093_RS07175 PF00561 alpha/beta hydrolase fold D3093_RS07185 PF01467 Cytidylyltransferase-like D3093_RS07185 PF00294 pfkB family carbohydrate kinase D3093_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS07195 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS07200 PF13649 Methyltransferase domain D3093_RS07220 PF13649 Methyltransferase domain D3093_RS07225 PF00162 Phosphoglycerate kinase D3093_RS07230 PF02132 RecR protein D3093_RS07230 PF13662 Toprim domain D3093_RS07235 PF02575 YbaB/EbfC DNA-binding family D3093_RS07240 PF12170 DNA polymerase III tau subunit V interacting with alpha D3093_RS07240 PF12169 DNA polymerase III subunits gamma and tau domain III D3093_RS07240 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D3093_RS07250 PF00034 Cytochrome c D3093_RS07255 PF02348 Cytidylyltransferase D3093_RS07260 PF01842 ACT domain D3093_RS07260 PF00800 Prephenate dehydratase D3093_RS07265 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain D3093_RS07265 PF09297 NADH pyrophosphatase zinc ribbon domain D3093_RS07265 PF00293 NUDIX domain D3093_RS07270 PF00459 Inositol monophosphatase family D3093_RS07280 PF00230 Major intrinsic protein D3093_RS07285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS07290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS07295 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS07300 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS07315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS07315 PF00005 ABC transporter D3093_RS07320 PF00849 RNA pseudouridylate synthase D3093_RS07325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS07335 PF01706 FliG C-terminal domain D3093_RS07335 PF14841 FliG middle domain D3093_RS07335 PF14842 FliG N-terminal domain D3093_RS07340 PF00883 Cytosol aminopeptidase family, catalytic domain D3093_RS07340 PF02789 Cytosol aminopeptidase family, N-terminal domain D3093_RS07350 PF16868 NMT1-like family D3093_RS07370 PF01336 OB-fold nucleic acid binding domain D3093_RS07370 PF02811 PHP domain D3093_RS07370 PF07733 Bacterial DNA polymerase III alpha NTPase domain D3093_RS07370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D3093_RS07370 PF14579 Helix-hairpin-helix motif D3093_RS07410 PF04055 Radical SAM superfamily D3093_RS07415 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS07415 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS07425 PF01548 Transposase D3093_RS07425 PF02371 Transposase IS116/IS110/IS902 family D3093_RS07430 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS07435 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS07440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS07445 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS07450 PF07690 Major Facilitator Superfamily D3093_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS07460 PF03466 LysR substrate binding domain D3093_RS07485 PF08447 PAS fold D3093_RS07485 PF08448 PAS fold D3093_RS07485 PF00563 EAL domain D3093_RS07485 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS07490 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS07495 PF00202 Aminotransferase class-III D3093_RS07505 PF00155 Aminotransferase class I and II D3093_RS07535 PF02646 RmuC family D3093_RS07540 PF00313 'Cold-shock' DNA-binding domain D3093_RS07550 PF01327 Polypeptide deformylase D3093_RS07555 PF00551 Formyl transferase D3093_RS07555 PF02911 Formyl transferase, C-terminal domain D3093_RS07560 PF01416 tRNA pseudouridine synthase D3093_RS07565 PF02653 Branched-chain amino acid transport system / permease component D3093_RS07570 PF01878 EVE domain D3093_RS07580 PF13280 WYL domain D3093_RS07580 PF08279 HTH domain D3093_RS07585 PF00330 Aconitase family (aconitate hydratase) D3093_RS07600 PF01245 Ribosomal protein L19 D3093_RS07605 PF01746 tRNA (Guanine-1)-methyltransferase D3093_RS07610 PF01782 RimM N-terminal domain D3093_RS07610 PF05239 PRC-barrel domain D3093_RS07615 PF00886 Ribosomal protein S16 D3093_RS07620 PF02881 SRP54-type protein, helical bundle domain D3093_RS07620 PF00448 SRP54-type protein, GTPase domain D3093_RS07620 PF02978 Signal peptide binding domain D3093_RS07645 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS07645 PF03707 Bacterial signalling protein N terminal repeat D3093_RS07645 PF00563 EAL domain D3093_RS07655 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS07655 PF14602 Hexapeptide repeat of succinyl-transferase D3093_RS07655 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D3093_RS07660 PF07687 Peptidase dimerisation domain D3093_RS07660 PF01546 Peptidase family M20/M25/M40 D3093_RS07670 PF02277 Phosphoribosyltransferase D3093_RS07675 PF02654 Cobalamin-5-phosphate synthase D3093_RS07690 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS07690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D3093_RS07700 PF00005 ABC transporter D3093_RS07705 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS07710 PF02954 Bacterial regulatory protein, Fis family D3093_RS07710 PF00072 Response regulator receiver domain D3093_RS07715 PF00892 EamA-like transporter family D3093_RS07735 PF13614 AAA domain D3093_RS07735 PF02706 Chain length determinant protein D3093_RS07735 PF13807 G-rich domain on putative tyrosine kinase D3093_RS07745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3093_RS07745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3093_RS07745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3093_RS07750 PF01370 NAD dependent epimerase/dehydratase family D3093_RS07755 PF01370 NAD dependent epimerase/dehydratase family D3093_RS07770 PF00534 Glycosyl transferases group 1 D3093_RS07770 PF13439 Glycosyltransferase Family 4 D3093_RS07800 PF00535 Glycosyl transferase family 2 D3093_RS07810 PF00468 Ribosomal protein L34 D3093_RS07815 PF00825 Ribonuclease P D3093_RS07820 PF01809 Putative membrane protein insertion efficiency factor D3093_RS07825 PF02096 60Kd inner membrane protein D3093_RS07825 PF14849 YidC periplasmic domain D3093_RS07830 PF01926 50S ribosome-binding GTPase D3093_RS07845 PF00696 Amino acid kinase family D3093_RS07855 PF01544 CorA-like Mg2+ transporter protein D3093_RS07870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D3093_RS07885 PF01274 Malate synthase D3093_RS07890 PF02899 Phage integrase, N-terminal SAM-like domain D3093_RS07890 PF00589 Phage integrase family D3093_RS07905 PF01202 Shikimate kinase D3093_RS07910 PF01761 3-dehydroquinate synthase D3093_RS07915 PF00571 CBS domain D3093_RS07930 PF01722 BolA-like protein D3093_RS07935 PF00226 DnaJ domain D3093_RS07940 PF12556 Cobaltochelatase CobS subunit N terminal D3093_RS07940 PF08406 CbbQ/NirQ/NorQ C-terminal D3093_RS07940 PF07728 AAA domain (dynein-related subfamily) D3093_RS07950 PF11775 Cobalamin biosynthesis protein CobT VWA domain D3093_RS07950 PF06213 Cobalamin biosynthesis protein CobT D3093_RS07965 PF05726 Pirin C-terminal cupin domain D3093_RS07965 PF02678 Pirin D3093_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS07980 PF00072 Response regulator receiver domain D3093_RS07980 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS07985 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D3093_RS07990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D3093_RS08000 PF01266 FAD dependent oxidoreductase D3093_RS08005 PF02423 Ornithine cyclodeaminase/mu-crystallin family D3093_RS08015 PF00216 Bacterial DNA-binding protein D3093_RS08025 PF00575 S1 RNA binding domain D3093_RS08030 PF02224 Cytidylate kinase D3093_RS08035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D3093_RS08060 PF02678 Pirin D3093_RS08060 PF05726 Pirin C-terminal cupin domain D3093_RS08065 PF00994 Probable molybdopterin binding domain D3093_RS08065 PF03453 MoeA N-terminal region (domain I and II) D3093_RS08065 PF03454 MoeA C-terminal region (domain IV) D3093_RS08075 PF00072 Response regulator receiver domain D3093_RS08075 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS08080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS08080 PF00072 Response regulator receiver domain D3093_RS08080 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08080 PF00672 HAMP domain D3093_RS08080 PF01627 Hpt domain D3093_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08085 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS08085 PF01627 Hpt domain D3093_RS08085 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08085 PF00072 Response regulator receiver domain D3093_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08085 PF00672 HAMP domain D3093_RS08090 PF00535 Glycosyl transferase family 2 D3093_RS08100 PF00011 Hsp20/alpha crystallin family D3093_RS08125 PF01757 Acyltransferase family D3093_RS08130 PF00330 Aconitase family (aconitate hydratase) D3093_RS08130 PF00694 Aconitase C-terminal domain D3093_RS08160 PF00535 Glycosyl transferase family 2 D3093_RS08170 PF01593 Flavin containing amine oxidoreductase D3093_RS08175 PF01593 Flavin containing amine oxidoreductase D3093_RS08180 PF00171 Aldehyde dehydrogenase family D3093_RS08190 PF01008 Initiation factor 2 subunit family D3093_RS08195 PF12282 Signal transduction histidine kinase D3093_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08195 PF07568 Histidine kinase D3093_RS08210 PF00474 Sodium:solute symporter family D3093_RS08215 PF04341 Protein of unknown function, DUF485 D3093_RS08230 PF00795 Carbon-nitrogen hydrolase D3093_RS08235 PF00462 Glutaredoxin D3093_RS08240 PF00156 Phosphoribosyl transferase domain D3093_RS08245 PF01313 Bacterial export proteins, family 3 D3093_RS08250 PF08241 Methyltransferase domain D3093_RS08270 PF03186 CobD/Cbib protein D3093_RS08275 PF00271 Helicase conserved C-terminal domain D3093_RS08275 PF00270 DEAD/DEAH box helicase D3093_RS08280 PF01741 Large-conductance mechanosensitive channel, MscL D3093_RS08285 PF02810 SEC-C motif D3093_RS08285 PF07517 SecA DEAD-like domain D3093_RS08285 PF01043 SecA preprotein cross-linking domain D3093_RS08285 PF07516 SecA Wing and Scaffold domain D3093_RS08295 PF01960 ArgJ family D3093_RS08305 PF00293 NUDIX domain D3093_RS08310 PF00270 DEAD/DEAH box helicase D3093_RS08310 PF00570 HRDC domain D3093_RS08310 PF09382 RQC domain D3093_RS08310 PF16124 RecQ zinc-binding D3093_RS08310 PF00271 Helicase conserved C-terminal domain D3093_RS08335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS08335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS08345 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS08350 PF00691 OmpA family D3093_RS08360 PF06761 Intracellular multiplication and human macrophage-killing D3093_RS08360 PF14331 ImcF-related N-terminal domain D3093_RS08360 PF06744 Type VI secretion protein IcmF C-terminal D3093_RS08375 PF00296 Luciferase-like monooxygenase D3093_RS08385 PF01641 SelR domain D3093_RS08390 PF01738 Dienelactone hydrolase family D3093_RS08395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3093_RS08395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3093_RS08395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3093_RS08395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3093_RS08400 PF00313 'Cold-shock' DNA-binding domain D3093_RS08430 PF01227 GTP cyclohydrolase I D3093_RS08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08435 PF00989 PAS fold D3093_RS08435 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08465 PF02875 Mur ligase family, glutamate ligase domain D3093_RS08465 PF08245 Mur ligase middle domain D3093_RS08470 PF17848 Acetyl-coA carboxylase zinc finger domain D3093_RS08470 PF01039 Carboxyl transferase domain D3093_RS08475 PF00290 Tryptophan synthase alpha chain D3093_RS08480 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS08485 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08490 PF00672 HAMP domain D3093_RS08490 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS08490 PF00072 Response regulator receiver domain D3093_RS08490 PF01627 Hpt domain D3093_RS08495 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08500 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS08505 PF01548 Transposase D3093_RS08505 PF02371 Transposase IS116/IS110/IS902 family D3093_RS08510 PF00672 HAMP domain D3093_RS08510 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS08515 PF00486 Transcriptional regulatory protein, C terminal D3093_RS08515 PF00072 Response regulator receiver domain D3093_RS08525 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS08535 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D3093_RS08545 PF12804 MobA-like NTP transferase domain D3093_RS08550 PF12705 PD-(D/E)XK nuclease superfamily D3093_RS08555 PF12705 PD-(D/E)XK nuclease superfamily D3093_RS08555 PF13361 UvrD-like helicase C-terminal domain D3093_RS08555 PF00580 UvrD/REP helicase N-terminal domain D3093_RS08560 PF00085 Thioredoxin D3093_RS08565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS08565 PF03466 LysR substrate binding domain D3093_RS08575 PF03881 Fructosamine kinase D3093_RS08580 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3093_RS08585 PF02146 Sir2 family D3093_RS08590 PF03167 Uracil DNA glycosylase superfamily D3093_RS08600 PF01329 Pterin 4 alpha carbinolamine dehydratase D3093_RS08605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3093_RS08605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3093_RS08610 PF01544 CorA-like Mg2+ transporter protein D3093_RS08615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D3093_RS08615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D3093_RS08620 PF02594 Uncharacterised ACR, YggU family COG1872 D3093_RS08625 PF02325 YGGT family D3093_RS08640 PF14338 Mrr N-terminal domain D3093_RS08640 PF04471 Restriction endonuclease D3093_RS08655 PF11867 Domain of unknown function (DUF3387) D3093_RS08655 PF18766 SWI2/SNF2 ATPase D3093_RS08655 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D3093_RS08695 PF02796 Helix-turn-helix domain of resolvase D3093_RS08695 PF00239 Resolvase, N terminal domain D3093_RS08775 PF13538 UvrD-like helicase C-terminal domain D3093_RS08775 PF14490 Helix-hairpin-helix containing domain D3093_RS08775 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D3093_RS08780 PF00700 Bacterial flagellin C-terminal helical region D3093_RS08780 PF00669 Bacterial flagellin N-terminal helical region D3093_RS08825 PF02796 Helix-turn-helix domain of resolvase D3093_RS08825 PF00239 Resolvase, N terminal domain D3093_RS08840 PF03379 CcmB protein D3093_RS08845 PF00005 ABC transporter D3093_RS08850 PF02080 TrkA-C domain D3093_RS08850 PF06826 Predicted Permease Membrane Region D3093_RS08855 PF06826 Predicted Permease Membrane Region D3093_RS08855 PF02080 TrkA-C domain D3093_RS08860 PF00005 ABC transporter D3093_RS08865 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS08875 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS08885 PF01578 Cytochrome C assembly protein D3093_RS08895 PF03100 CcmE D3093_RS08900 PF01578 Cytochrome C assembly protein D3093_RS08900 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D3093_RS08905 PF08534 Redoxin D3093_RS08910 PF03918 Cytochrome C biogenesis protein D3093_RS08920 PF00892 EamA-like transporter family D3093_RS08925 PF06803 Protein of unknown function (DUF1232) D3093_RS08930 PF00581 Rhodanese-like domain D3093_RS08940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS08940 PF12729 Four helix bundle sensory module for signal transduction D3093_RS08940 PF00672 HAMP domain D3093_RS08945 PF00764 Arginosuccinate synthase D3093_RS08960 PF04055 Radical SAM superfamily D3093_RS08970 PF04545 Sigma-70, region 4 D3093_RS08970 PF04542 Sigma-70 region 2 D3093_RS08975 PF12973 ChrR Cupin-like domain D3093_RS08990 PF06445 GyrI-like small molecule binding domain D3093_RS09000 PF00909 Ammonium Transporter Family D3093_RS09005 PF00483 Nucleotidyl transferase D3093_RS09010 PF08323 Starch synthase catalytic domain D3093_RS09010 PF00534 Glycosyl transferases group 1 D3093_RS09015 PF00009 Elongation factor Tu GTP binding domain D3093_RS09015 PF00679 Elongation factor G C-terminus D3093_RS09015 PF06421 GTP-binding protein LepA C-terminus D3093_RS09015 PF03144 Elongation factor Tu domain 2 D3093_RS09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS09025 PF03466 LysR substrate binding domain D3093_RS09035 PF11849 Domain of unknown function (DUF3369) D3093_RS09045 PF03483 B3/4 domain D3093_RS09045 PF03484 tRNA synthetase B5 domain D3093_RS09045 PF03147 Ferredoxin-fold anticodon binding domain D3093_RS09045 PF01588 Putative tRNA binding domain D3093_RS09045 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D3093_RS09050 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D3093_RS09050 PF01409 tRNA synthetases class II core domain (F) D3093_RS09055 PF00453 Ribosomal protein L20 D3093_RS09060 PF01632 Ribosomal protein L35 D3093_RS09080 PF00672 HAMP domain D3093_RS09080 PF02743 Cache domain D3093_RS09080 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS09085 PF04542 Sigma-70 region 2 D3093_RS09085 PF00140 Sigma-70 factor, region 1.2 D3093_RS09085 PF04545 Sigma-70, region 4 D3093_RS09100 PF00037 4Fe-4S binding domain D3093_RS09100 PF11953 Domain of unknown function (DUF3470) D3093_RS09105 PF03466 LysR substrate binding domain D3093_RS09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS09110 PF06779 Uncharacterised MFS-type transporter YbfB D3093_RS09125 PF03471 Transporter associated domain D3093_RS09125 PF03741 Integral membrane protein TerC family D3093_RS09130 PF01479 S4 domain D3093_RS09145 PF00183 Hsp90 protein D3093_RS09150 PF00989 PAS fold D3093_RS09150 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS09160 PF01475 Ferric uptake regulator family D3093_RS09185 PF01297 Zinc-uptake complex component A periplasmic D3093_RS09190 PF00005 ABC transporter D3093_RS09195 PF00950 ABC 3 transport family D3093_RS09200 PF00950 ABC 3 transport family D3093_RS09205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS09205 PF00072 Response regulator receiver domain D3093_RS09205 PF00672 HAMP domain D3093_RS09205 PF01627 Hpt domain D3093_RS09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS09205 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS09210 PF00313 'Cold-shock' DNA-binding domain D3093_RS09215 PF02954 Bacterial regulatory protein, Fis family D3093_RS09215 PF00158 Sigma-54 interaction domain D3093_RS09215 PF00072 Response regulator receiver domain D3093_RS09220 PF02441 Flavoprotein D3093_RS09220 PF04127 DNA / pantothenate metabolism flavoprotein D3093_RS09225 PF00692 dUTPase D3093_RS09230 PF02082 Transcriptional regulator D3093_RS09235 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS09245 PF00899 ThiF family D3093_RS09260 PF00072 Response regulator receiver domain D3093_RS09260 PF00486 Transcriptional regulatory protein, C terminal D3093_RS09265 PF01895 PhoU domain D3093_RS09270 PF00005 ABC transporter D3093_RS09275 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS09280 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS09285 PF12849 PBP superfamily domain D3093_RS09305 PF16736 Single Cache-like D3093_RS09305 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS09305 PF00989 PAS fold D3093_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS09310 PF00390 Malic enzyme, N-terminal domain D3093_RS09310 PF03949 Malic enzyme, NAD binding domain D3093_RS09310 PF01515 Phosphate acetyl/butaryl transferase D3093_RS09320 PF13545 Crp-like helix-turn-helix domain D3093_RS09320 PF00027 Cyclic nucleotide-binding domain D3093_RS09325 PF03597 Cytochrome oxidase maturation protein cbb3-type D3093_RS09330 PF00403 Heavy-metal-associated domain D3093_RS09340 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3093_RS09340 PF12801 4Fe-4S binding domain D3093_RS09340 PF13746 4Fe-4S dicluster domain D3093_RS09345 PF00034 Cytochrome c D3093_RS09345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS09345 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D3093_RS09360 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3093_RS09370 PF17785 PUA-like domain D3093_RS09370 PF10672 S-adenosylmethionine-dependent methyltransferase D3093_RS09375 PF05958 tRNA (Uracil-5-)-methyltransferase D3093_RS09380 PF00394 Multicopper oxidase D3093_RS09380 PF07731 Multicopper oxidase D3093_RS09380 PF07732 Multicopper oxidase D3093_RS09380 PF10518 TAT (twin-arginine translocation) pathway signal sequence D3093_RS09395 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS09415 PF05425 Copper resistance protein D D3093_RS09420 PF00005 ABC transporter D3093_RS09420 PF08402 TOBE domain D3093_RS09425 PF13416 Bacterial extracellular solute-binding protein D3093_RS09430 PF08299 Bacterial dnaA protein helix-turn-helix D3093_RS09430 PF11638 DnaA N-terminal domain D3093_RS09430 PF00308 Bacterial dnaA protein D3093_RS09435 PF01649 Ribosomal protein S20 D3093_RS09440 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS09450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D3093_RS09450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D3093_RS09465 PF01209 ubiE/COQ5 methyltransferase family D3093_RS09470 PF03109 ABC1 family D3093_RS09480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS09485 PF00719 Inorganic pyrophosphatase D3093_RS09490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3093_RS09490 PF00056 lactate/malate dehydrogenase, NAD binding domain D3093_RS09495 PF00583 Acetyltransferase (GNAT) family D3093_RS09495 PF13380 CoA binding domain D3093_RS09495 PF13607 Succinyl-CoA ligase like flavodoxin domain D3093_RS09505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS09505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS09520 PF02915 Rubrerythrin D3093_RS09535 PF03009 Glycerophosphoryl diester phosphodiesterase family D3093_RS09540 PF12544 Lysine-2,3-aminomutase D3093_RS09540 PF04055 Radical SAM superfamily D3093_RS09550 PF04228 Putative neutral zinc metallopeptidase D3093_RS09560 PF00575 S1 RNA binding domain D3093_RS09560 PF01138 3' exoribonuclease family, domain 1 D3093_RS09560 PF03725 3' exoribonuclease family, domain 2 D3093_RS09560 PF00013 KH domain D3093_RS09560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D3093_RS09565 PF00312 Ribosomal protein S15 D3093_RS09570 PF16198 tRNA pseudouridylate synthase B C-terminal domain D3093_RS09570 PF01509 TruB family pseudouridylate synthase (N terminal domain) D3093_RS09575 PF02033 Ribosome-binding factor A D3093_RS09580 PF00009 Elongation factor Tu GTP binding domain D3093_RS09580 PF03144 Elongation factor Tu domain 2 D3093_RS09580 PF11987 Translation-initiation factor 2 D3093_RS09580 PF08364 Bacterial translation initiation factor IF-2 associated region D3093_RS09580 PF04760 Translation initiation factor IF-2, N-terminal region D3093_RS09590 PF13184 NusA-like KH domain D3093_RS09590 PF08529 NusA N-terminal domain D3093_RS09590 PF00575 S1 RNA binding domain D3093_RS09595 PF17384 RimP C-terminal SH3 domain D3093_RS09595 PF02576 RimP N-terminal domain D3093_RS09600 PF03992 Antibiotic biosynthesis monooxygenase D3093_RS09605 PF02390 Putative methyltransferase D3093_RS09610 PF02773 S-adenosylmethionine synthetase, C-terminal domain D3093_RS09610 PF02772 S-adenosylmethionine synthetase, central domain D3093_RS09610 PF00438 S-adenosylmethionine synthetase, N-terminal domain D3093_RS09615 PF01381 Helix-turn-helix D3093_RS09620 PF00795 Carbon-nitrogen hydrolase D3093_RS09625 PF00571 CBS domain D3093_RS09625 PF03471 Transporter associated domain D3093_RS09630 PF02130 Uncharacterized protein family UPF0054 D3093_RS09635 PF02562 PhoH-like protein D3093_RS09640 PF00919 Uncharacterized protein family UPF0004 D3093_RS09640 PF01938 TRAM domain D3093_RS09640 PF04055 Radical SAM superfamily D3093_RS09655 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS09670 PF00814 Glycoprotease family D3093_RS09675 PF01427 D-ala-D-ala dipeptidase D3093_RS09685 PF01106 NifU-like domain D3093_RS09690 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS09690 PF00672 HAMP domain D3093_RS09710 PF01925 Sulfite exporter TauE/SafE D3093_RS09715 PF00294 pfkB family carbohydrate kinase D3093_RS09730 PF00633 Helix-hairpin-helix motif D3093_RS09730 PF00730 HhH-GPD superfamily base excision DNA repair protein D3093_RS09730 PF10576 Iron-sulfur binding domain of endonuclease III D3093_RS09740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3093_RS09740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3093_RS09745 PF01113 Dihydrodipicolinate reductase, N-terminus D3093_RS09745 PF05173 Dihydrodipicolinate reductase, C-terminus D3093_RS09750 PF01297 Zinc-uptake complex component A periplasmic D3093_RS09755 PF00005 ABC transporter D3093_RS09760 PF00950 ABC 3 transport family D3093_RS09765 PF03466 LysR substrate binding domain D3093_RS09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS09770 PF01810 LysE type translocator D3093_RS09775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS09780 PF02754 Cysteine-rich domain D3093_RS09785 PF11870 Domain of unknown function (DUF3390) D3093_RS09785 PF02589 LUD domain D3093_RS09785 PF13183 4Fe-4S dicluster domain D3093_RS09790 PF02589 LUD domain D3093_RS09805 PF13188 PAS domain D3093_RS09805 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS09805 PF00989 PAS fold D3093_RS09805 PF13426 PAS domain D3093_RS09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS09810 PF12848 ABC transporter D3093_RS09810 PF16326 ABC transporter C-terminal domain D3093_RS09810 PF00005 ABC transporter D3093_RS09815 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS09815 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS09815 PF07724 AAA domain (Cdc48 subfamily) D3093_RS09820 PF00227 Proteasome subunit D3093_RS09830 PF00475 Imidazoleglycerol-phosphate dehydratase D3093_RS09835 PF00117 Glutamine amidotransferase class-I D3093_RS09840 PF00583 Acetyltransferase (GNAT) family D3093_RS09845 PF00977 Histidine biosynthesis protein D3093_RS09850 PF00977 Histidine biosynthesis protein D3093_RS09855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D3093_RS09860 PF01230 HIT domain D3093_RS09870 PF06725 3D domain D3093_RS09870 PF03562 MltA specific insert domain D3093_RS09875 PF04280 Tim44-like domain D3093_RS09880 PF04186 FxsA cytoplasmic membrane protein D3093_RS09885 PF02556 Preprotein translocase subunit SecB D3093_RS09890 PF07498 Rho termination factor, N-terminal domain D3093_RS09890 PF07497 Rho termination factor, RNA-binding domain D3093_RS09890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3093_RS09895 PF00690 Cation transporter/ATPase, N-terminus D3093_RS09895 PF00689 Cation transporting ATPase, C-terminus D3093_RS09900 PF03653 Uncharacterised protein family (UPF0093) D3093_RS09905 PF01208 Uroporphyrinogen decarboxylase (URO-D) D3093_RS09910 PF03618 Kinase/pyrophosphorylase D3093_RS09915 PF02545 Maf-like protein D3093_RS09920 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D3093_RS09920 PF01488 Shikimate / quinate 5-dehydrogenase D3093_RS09920 PF08501 Shikimate dehydrogenase substrate binding domain D3093_RS09925 PF01121 Dephospho-CoA kinase D3093_RS09930 PF00929 Exonuclease D3093_RS09935 PF00107 Zinc-binding dehydrogenase D3093_RS09935 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS09940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D3093_RS09940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D3093_RS09960 PF01926 50S ribosome-binding GTPase D3093_RS09960 PF10396 GTP-binding protein TrmE N-terminus D3093_RS09960 PF12631 MnmE helical domain D3093_RS09965 PF01134 Glucose inhibited division protein A D3093_RS09965 PF13932 GidA associated domain D3093_RS09970 PF02527 rRNA small subunit methyltransferase G D3093_RS09975 PF13614 AAA domain D3093_RS09980 PF02195 ParB-like nuclease domain D3093_RS09980 PF17762 HTH domain found in ParB protein D3093_RS10000 PF08264 Anticodon-binding domain of tRNA D3093_RS10000 PF13603 Leucyl-tRNA synthetase, Domain 2 D3093_RS10000 PF00133 tRNA synthetases class I (I, L, M and V) D3093_RS10040 PF00925 GTP cyclohydrolase II D3093_RS10045 PF00486 Transcriptional regulatory protein, C terminal D3093_RS10045 PF00072 Response regulator receiver domain D3093_RS10055 PF07995 Glucose / Sorbosone dehydrogenase D3093_RS10065 PF12706 Beta-lactamase superfamily domain D3093_RS10075 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10090 PF00005 ABC transporter D3093_RS10090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS10110 PF13302 Acetyltransferase (GNAT) domain D3093_RS10110 PF00027 Cyclic nucleotide-binding domain D3093_RS10115 PF00664 ABC transporter transmembrane region D3093_RS10115 PF00005 ABC transporter D3093_RS10125 PF00534 Glycosyl transferases group 1 D3093_RS10125 PF13439 Glycosyltransferase Family 4 D3093_RS10130 PF00072 Response regulator receiver domain D3093_RS10130 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS10135 PF00534 Glycosyl transferases group 1 D3093_RS10135 PF13439 Glycosyltransferase Family 4 D3093_RS10140 PF00300 Histidine phosphatase superfamily (branch 1) D3093_RS10150 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS10155 PF12802 MarR family D3093_RS10160 PF07722 Peptidase C26 D3093_RS10165 PF02675 S-adenosylmethionine decarboxylase D3093_RS10170 PF17284 Spermidine synthase tetramerisation domain D3093_RS10190 PF00440 Bacterial regulatory proteins, tetR family D3093_RS10195 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS10210 PF02810 SEC-C motif D3093_RS10220 PF01470 Pyroglutamyl peptidase D3093_RS10225 PF00579 tRNA synthetases class I (W and Y) D3093_RS10230 PF03023 Lipid II flippase MurJ D3093_RS10235 PF00072 Response regulator receiver domain D3093_RS10235 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS10235 PF09308 LuxQ, periplasmic D3093_RS10240 PF13458 Periplasmic binding protein D3093_RS10260 PF01909 Nucleotidyltransferase domain D3093_RS10260 PF08335 GlnD PII-uridylyltransferase D3093_RS10260 PF01966 HD domain D3093_RS10275 PF01624 MutS domain I D3093_RS10275 PF05188 MutS domain II D3093_RS10275 PF00488 MutS domain V D3093_RS10275 PF05190 MutS family domain IV D3093_RS10275 PF05192 MutS domain III D3093_RS10285 PF01740 STAS domain D3093_RS10290 PF01053 Cys/Met metabolism PLP-dependent enzyme D3093_RS10305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS10310 PF02021 Uncharacterised protein family UPF0102 D3093_RS10315 PF13369 Transglutaminase-like superfamily D3093_RS10320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D3093_RS10320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D3093_RS10335 PF00186 Dihydrofolate reductase D3093_RS10340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS10340 PF08269 Cache domain D3093_RS10345 PF04055 Radical SAM superfamily D3093_RS10345 PF06969 HemN C-terminal domain D3093_RS10350 PF01725 Ham1 family D3093_RS10355 PF03725 3' exoribonuclease family, domain 2 D3093_RS10355 PF01138 3' exoribonuclease family, domain 1 D3093_RS10360 PF01628 HrcA protein C terminal domain D3093_RS10365 PF01025 GrpE D3093_RS10370 PF00072 Response regulator receiver domain D3093_RS10390 PF00012 Hsp70 protein D3093_RS10395 PF00684 DnaJ central domain D3093_RS10395 PF00226 DnaJ domain D3093_RS10395 PF01556 DnaJ C terminal domain D3093_RS10400 PF17151 Periplasmic sensor domain D3093_RS10400 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS10405 PF02687 FtsX-like permease family D3093_RS10405 PF00005 ABC transporter D3093_RS10405 PF12704 MacB-like periplasmic core domain D3093_RS10410 PF00005 ABC transporter D3093_RS10415 PF13472 GDSL-like Lipase/Acylhydrolase family D3093_RS10420 PF08495 FIST N domain D3093_RS10420 PF10442 FIST C domain D3093_RS10425 PF00248 Aldo/keto reductase family D3093_RS10430 PF02834 LigT like Phosphoesterase D3093_RS10435 PF01494 FAD binding domain D3093_RS10440 PF00543 Nitrogen regulatory protein P-II D3093_RS10445 PF00155 Aminotransferase class I and II D3093_RS10450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D3093_RS10450 PF17854 FtsK alpha domain D3093_RS10450 PF01580 FtsK/SpoIIIE family D3093_RS10470 PF13335 Magnesium chelatase, subunit ChlI C-terminal D3093_RS10470 PF01078 Magnesium chelatase, subunit ChlI D3093_RS10475 PF02633 Creatinine amidohydrolase D3093_RS10480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS10485 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10490 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10490 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS10495 PF00156 Phosphoribosyl transferase domain D3093_RS10515 PF05974 Domain of unknown function (DUF892) D3093_RS10535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS10540 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D3093_RS10540 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D3093_RS10540 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D3093_RS10545 PF00174 Oxidoreductase molybdopterin binding domain D3093_RS10550 PF00989 PAS fold D3093_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS10550 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS10555 PF01965 DJ-1/PfpI family D3093_RS10560 PF00463 Isocitrate lyase family D3093_RS10565 PF06114 IrrE N-terminal-like domain D3093_RS10565 PF09856 Predicted transcriptional regulator (DUF2083) D3093_RS10565 PF01381 Helix-turn-helix D3093_RS10570 PF00175 Oxidoreductase NAD-binding domain D3093_RS10570 PF00970 Oxidoreductase FAD-binding domain D3093_RS10580 PF00156 Phosphoribosyl transferase domain D3093_RS10585 PF11849 Domain of unknown function (DUF3369) D3093_RS10590 PF00924 Mechanosensitive ion channel D3093_RS10595 PF00005 ABC transporter D3093_RS10595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS10600 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS10600 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10625 PF02628 Cytochrome oxidase assembly protein D3093_RS10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS10635 PF00959 Phage lysozyme D3093_RS10640 PF06233 Usg-like family D3093_RS10645 PF00166 Chaperonin 10 Kd subunit D3093_RS10650 PF00118 TCP-1/cpn60 chaperonin family D3093_RS10655 PF00199 Catalase D3093_RS10655 PF06628 Catalase-related immune-responsive D3093_RS10660 PF00034 Cytochrome c D3093_RS10660 PF03150 Di-haem cytochrome c peroxidase D3093_RS10665 PF03264 NapC/NirT cytochrome c family, N-terminal region D3093_RS10675 PF01593 Flavin containing amine oxidoreductase D3093_RS10685 PF00912 Transglycosylase D3093_RS10685 PF00905 Penicillin binding protein transpeptidase domain D3093_RS10695 PF02954 Bacterial regulatory protein, Fis family D3093_RS10695 PF00158 Sigma-54 interaction domain D3093_RS10700 PF04012 PspA/IM30 family D3093_RS10705 PF06667 Phage shock protein B D3093_RS10715 PF11849 Domain of unknown function (DUF3369) D3093_RS10725 PF01569 PAP2 superfamily D3093_RS10760 PF00563 EAL domain D3093_RS10760 PF03707 Bacterial signalling protein N terminal repeat D3093_RS10760 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS10780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS10785 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10790 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10790 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS10795 PF00005 ABC transporter D3093_RS10795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS10800 PF00005 ABC transporter D3093_RS10800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS10815 PF04073 Aminoacyl-tRNA editing domain D3093_RS10825 PF01227 GTP cyclohydrolase I D3093_RS10830 PF04379 ApaG domain D3093_RS10855 PF00005 ABC transporter D3093_RS10860 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS10875 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS10875 PF00672 HAMP domain D3093_RS10875 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB D3093_RS10875 PF08448 PAS fold D3093_RS10880 PF00072 Response regulator receiver domain D3093_RS10880 PF08448 PAS fold D3093_RS10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS10880 PF13188 PAS domain D3093_RS10880 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS10890 PF07722 Peptidase C26 D3093_RS10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS10895 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS10895 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS10905 PF13396 Phospholipase_D-nuclease N-terminal D3093_RS10905 PF13091 PLD-like domain D3093_RS10915 PF13488 Glycine zipper D3093_RS10915 PF00691 OmpA family D3093_RS10945 PF13180 PDZ domain D3093_RS10945 PF00595 PDZ domain D3093_RS10975 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D3093_RS10975 PF03900 Porphobilinogen deaminase, C-terminal domain D3093_RS10980 PF08241 Methyltransferase domain D3093_RS10985 PF00814 Glycoprotease family D3093_RS10995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D3093_RS10995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D3093_RS11000 PF03795 YCII-related domain D3093_RS11015 PF16177 Acetyl-coenzyme A synthetase N-terminus D3093_RS11015 PF00501 AMP-binding enzyme D3093_RS11015 PF13193 AMP-binding enzyme C-terminal domain D3093_RS11030 PF07896 Protein of unknown function (DUF1674) D3093_RS11035 PF01435 Peptidase family M48 D3093_RS11050 PF01029 NusB family D3093_RS11050 PF01189 16S rRNA methyltransferase RsmB/F D3093_RS11060 PF01808 AICARFT/IMPCHase bienzyme D3093_RS11060 PF02142 MGS-like domain D3093_RS11085 PF05088 Bacterial NAD-glutamate dehydrogenase D3093_RS11090 PF00672 HAMP domain D3093_RS11090 PF01966 HD domain D3093_RS11100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS11100 PF00672 HAMP domain D3093_RS11110 PF03547 Membrane transport protein D3093_RS11115 PF03737 Aldolase/RraA D3093_RS11130 PF00085 Thioredoxin D3093_RS11135 PF05362 Lon protease (S16) C-terminal proteolytic domain D3093_RS11135 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3093_RS11135 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS11140 PF03966 Trm112p-like protein D3093_RS11170 PF02371 Transposase IS116/IS110/IS902 family D3093_RS11170 PF01548 Transposase D3093_RS11175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3093_RS11175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3093_RS11180 PF02308 MgtC family D3093_RS11185 PF07690 Major Facilitator Superfamily D3093_RS11195 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11195 PF09456 RcsC Alpha-Beta-Loop (ABL) D3093_RS11195 PF00072 Response regulator receiver domain D3093_RS11215 PF13416 Bacterial extracellular solute-binding protein D3093_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS11225 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS11230 PF08402 TOBE domain D3093_RS11230 PF00005 ABC transporter D3093_RS11235 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS11235 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS11250 PF00271 Helicase conserved C-terminal domain D3093_RS11250 PF00270 DEAD/DEAH box helicase D3093_RS11255 PF01475 Ferric uptake regulator family D3093_RS11270 PF01627 Hpt domain D3093_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11270 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS11270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS11270 PF00072 Response regulator receiver domain D3093_RS11270 PF00672 HAMP domain D3093_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11275 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS11280 PF01740 STAS domain D3093_RS11290 PF00072 Response regulator receiver domain D3093_RS11290 PF00486 Transcriptional regulatory protein, C terminal D3093_RS11310 PF00072 Response regulator receiver domain D3093_RS11310 PF00486 Transcriptional regulatory protein, C terminal D3093_RS11315 PF00072 Response regulator receiver domain D3093_RS11315 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS11325 PF01740 STAS domain D3093_RS11330 PF02743 Cache domain D3093_RS11330 PF00672 HAMP domain D3093_RS11330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS11335 PF00072 Response regulator receiver domain D3093_RS11335 PF01339 CheB methylesterase D3093_RS11340 PF03975 CheD chemotactic sensory transduction D3093_RS11345 PF01739 CheR methyltransferase, SAM binding domain D3093_RS11345 PF03705 CheR methyltransferase, all-alpha domain D3093_RS11350 PF00672 HAMP domain D3093_RS11350 PF02203 Tar ligand binding domain homologue D3093_RS11350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS11355 PF01584 CheW-like domain D3093_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11360 PF01584 CheW-like domain D3093_RS11360 PF02895 Signal transducing histidine kinase, homodimeric domain D3093_RS11360 PF01627 Hpt domain D3093_RS11365 PF00072 Response regulator receiver domain D3093_RS11375 PF16736 Single Cache-like D3093_RS11375 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11375 PF00989 PAS fold D3093_RS11385 PF00929 Exonuclease D3093_RS11390 PF00486 Transcriptional regulatory protein, C terminal D3093_RS11390 PF00072 Response regulator receiver domain D3093_RS11405 PF04279 Intracellular septation protein A D3093_RS11415 PF01048 Phosphorylase superfamily D3093_RS11415 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D3093_RS11420 PF00448 SRP54-type protein, GTPase domain D3093_RS11420 PF02881 SRP54-type protein, helical bundle domain D3093_RS11425 PF00919 Uncharacterized protein family UPF0004 D3093_RS11425 PF04055 Radical SAM superfamily D3093_RS11430 PF01678 Diaminopimelate epimerase D3093_RS11455 PF00694 Aconitase C-terminal domain D3093_RS11460 PF00180 Isocitrate/isopropylmalate dehydrogenase D3093_RS11475 PF03328 HpcH/HpaI aldolase/citrate lyase family D3093_RS11480 PF08543 Phosphomethylpyrimidine kinase D3093_RS11485 PF03641 Possible lysine decarboxylase D3093_RS11495 PF03969 AFG1-like ATPase D3093_RS11500 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS11505 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS11505 PF13188 PAS domain D3093_RS11505 PF13426 PAS domain D3093_RS11505 PF00989 PAS fold D3093_RS11510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3093_RS11510 PF00364 Biotin-requiring enzyme D3093_RS11510 PF02817 e3 binding domain D3093_RS11515 PF00676 Dehydrogenase E1 component D3093_RS11515 PF16078 2-oxoglutarate dehydrogenase N-terminus D3093_RS11515 PF16870 2-oxoglutarate dehydrogenase C-terminal D3093_RS11515 PF02779 Transketolase, pyrimidine binding domain D3093_RS11520 PF02629 CoA binding domain D3093_RS11520 PF00549 CoA-ligase D3093_RS11525 PF00549 CoA-ligase D3093_RS11525 PF08442 ATP-grasp domain D3093_RS11530 PF00056 lactate/malate dehydrogenase, NAD binding domain D3093_RS11530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D3093_RS11545 PF01921 tRNA synthetases class I (K) D3093_RS11550 PF00893 Small Multidrug Resistance protein D3093_RS11560 PF00912 Transglycosylase D3093_RS11565 PF04851 Type III restriction enzyme, res subunit D3093_RS11565 PF13307 Helicase C-terminal domain D3093_RS11565 PF00929 Exonuclease D3093_RS11570 PF08269 Cache domain D3093_RS11570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS11580 PF04204 Homoserine O-succinyltransferase D3093_RS11600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS11600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS11605 PF13673 Acetyltransferase (GNAT) domain D3093_RS11610 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3093_RS11610 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3093_RS11620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D3093_RS11630 PF00890 FAD binding domain D3093_RS11630 PF02910 Fumarate reductase flavoprotein C-term D3093_RS11635 PF13085 2Fe-2S iron-sulfur cluster binding domain D3093_RS11635 PF13237 4Fe-4S dicluster domain D3093_RS11645 PF01063 Amino-transferase class IV D3093_RS11780 PF00563 EAL domain D3093_RS11780 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS11780 PF03707 Bacterial signalling protein N terminal repeat D3093_RS11815 PF12708 Pectate lyase superfamily protein D3093_RS11815 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3093_RS11815 PF13229 Right handed beta helix region D3093_RS11845 PF01180 Dihydroorotate dehydrogenase D3093_RS11855 PF02824 TGS domain D3093_RS11855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3093_RS11855 PF03129 Anticodon binding domain D3093_RS11855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D3093_RS11860 PF05198 Translation initiation factor IF-3, N-terminal domain D3093_RS11860 PF00707 Translation initiation factor IF-3, C-terminal domain D3093_RS11865 PF00905 Penicillin binding protein transpeptidase domain D3093_RS11865 PF00912 Transglycosylase D3093_RS11890 PF13477 Glycosyl transferase 4-like D3093_RS11890 PF00534 Glycosyl transferases group 1 D3093_RS11955 PF02371 Transposase IS116/IS110/IS902 family D3093_RS11955 PF01548 Transposase D3093_RS11975 PF09704 CRISPR-associated protein (Cas_Cas5) D3093_RS11995 PF01867 CRISPR associated protein Cas1 D3093_RS12000 PF09827 CRISPR associated protein Cas2 D3093_RS12005 PF01695 IstB-like ATP binding protein D3093_RS12015 PF00092 von Willebrand factor type A domain D3093_RS12045 PF00005 ABC transporter D3093_RS12055 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12100 PF03466 LysR substrate binding domain D3093_RS12105 PF02515 CoA-transferase family III D3093_RS12110 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS12120 PF01425 Amidase D3093_RS12130 PF13458 Periplasmic binding protein D3093_RS12135 PF02653 Branched-chain amino acid transport system / permease component D3093_RS12140 PF11862 Domain of unknown function (DUF3382) D3093_RS12140 PF02653 Branched-chain amino acid transport system / permease component D3093_RS12145 PF00005 ABC transporter D3093_RS12145 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS12150 PF00005 ABC transporter D3093_RS12155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3093_RS12160 PF09723 Zinc ribbon domain D3093_RS12165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D3093_RS12165 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS12170 PF03707 Bacterial signalling protein N terminal repeat D3093_RS12170 PF00563 EAL domain D3093_RS12170 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS12175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS12185 PF00596 Class II Aldolase and Adducin N-terminal domain D3093_RS12190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS12195 PF00296 Luciferase-like monooxygenase D3093_RS12200 PF09084 NMT1/THI5 like D3093_RS12205 PF00005 ABC transporter D3093_RS12210 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12215 PF03466 LysR substrate binding domain D3093_RS12225 PF00881 Nitroreductase family D3093_RS12250 PF00155 Aminotransferase class I and II D3093_RS12260 PF06965 Na+/H+ antiporter 1 D3093_RS12265 PF00009 Elongation factor Tu GTP binding domain D3093_RS12265 PF03764 Elongation factor G, domain IV D3093_RS12265 PF14492 Elongation Factor G, domain II D3093_RS12265 PF00679 Elongation factor G C-terminus D3093_RS12270 PF02558 Ketopantoate reductase PanE/ApbA D3093_RS12270 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3093_RS12280 PF00210 Ferritin-like domain D3093_RS12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS12305 PF06258 Mitochondrial fission ELM1 D3093_RS12310 PF01037 Lrp/AsnC ligand binding domain D3093_RS12320 PF03449 Transcription elongation factor, N-terminal D3093_RS12320 PF01272 Transcription elongation factor, GreA/GreB, C-term D3093_RS12325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3093_RS12325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3093_RS12325 PF02142 MGS-like domain D3093_RS12340 PF02308 MgtC family D3093_RS12350 PF01580 FtsK/SpoIIIE family D3093_RS12350 PF09397 Ftsk gamma domain D3093_RS12350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D3093_RS12350 PF17854 FtsK alpha domain D3093_RS12360 PF01625 Peptide methionine sulfoxide reductase D3093_RS12370 PF08032 RNA 2'-O ribose methyltransferase substrate binding D3093_RS12370 PF00588 SpoU rRNA Methylase family D3093_RS12375 PF00106 short chain dehydrogenase D3093_RS12380 PF09335 SNARE associated Golgi protein D3093_RS12390 PF00034 Cytochrome c D3093_RS12395 PF03459 TOBE domain D3093_RS12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12400 PF00171 Aldehyde dehydrogenase family D3093_RS12410 PF09190 DALR domain D3093_RS12410 PF01406 tRNA synthetases class I (C) catalytic domain D3093_RS12415 PF00749 tRNA synthetases class I (E and Q), catalytic domain D3093_RS12420 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS12420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS12420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS12435 PF01627 Hpt domain D3093_RS12435 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS12435 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS12435 PF00989 PAS fold D3093_RS12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS12435 PF00072 Response regulator receiver domain D3093_RS12445 PF01757 Acyltransferase family D3093_RS12455 PF00672 HAMP domain D3093_RS12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS12455 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS12465 PF00682 HMGL-like D3093_RS12465 PF08502 LeuA allosteric (dimerisation) domain D3093_RS12475 PF04397 LytTr DNA-binding domain D3093_RS12490 PF00163 Ribosomal protein S4/S9 N-terminal domain D3093_RS12490 PF01479 S4 domain D3093_RS12500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3093_RS12520 PF00462 Glutaredoxin D3093_RS12530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D3093_RS12530 PF00586 AIR synthase related protein, N-terminal domain D3093_RS12530 PF02769 AIR synthase related protein, C-terminal domain D3093_RS12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12540 PF03466 LysR substrate binding domain D3093_RS12550 PF03473 MOSC domain D3093_RS12550 PF03475 3-alpha domain D3093_RS12555 PF06029 AlkA N-terminal domain D3093_RS12555 PF00730 HhH-GPD superfamily base excision DNA repair protein D3093_RS12555 PF12833 Helix-turn-helix domain D3093_RS12555 PF02805 Metal binding domain of Ada D3093_RS12560 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D3093_RS12565 PF01259 SAICAR synthetase D3093_RS12590 PF10397 Adenylosuccinate lyase C-terminus D3093_RS12590 PF00206 Lyase D3093_RS12595 PF00563 EAL domain D3093_RS12595 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS12595 PF03707 Bacterial signalling protein N terminal repeat D3093_RS12605 PF04002 RadC-like JAB domain D3093_RS12610 PF00557 Metallopeptidase family M24 D3093_RS12615 PF17746 SfsA N-terminal OB domain D3093_RS12615 PF03749 Sugar fermentation stimulation protein RE domain D3093_RS12620 PF00994 Probable molybdopterin binding domain D3093_RS12620 PF02464 Competence-damaged protein D3093_RS12635 PF00210 Ferritin-like domain D3093_RS12655 PF03129 Anticodon binding domain D3093_RS12655 PF13393 Histidyl-tRNA synthetase D3093_RS12660 PF01979 Amidohydrolase family D3093_RS12665 PF02601 Exonuclease VII, large subunit D3093_RS12665 PF13742 OB-fold nucleic acid binding domain D3093_RS12670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D3093_RS12670 PF02843 Phosphoribosylglycinamide synthetase, C domain D3093_RS12670 PF02844 Phosphoribosylglycinamide synthetase, N domain D3093_RS12685 PF14437 MafB19-like deaminase D3093_RS12690 PF07311 Dodecin D3093_RS12695 PF01479 S4 domain D3093_RS12695 PF00849 RNA pseudouridylate synthase D3093_RS12710 PF00128 Alpha amylase, catalytic domain D3093_RS12710 PF16657 Maltogenic Amylase, C-terminal domain D3093_RS12715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D3093_RS12720 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS12725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS12725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS12730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS12735 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS12740 PF02779 Transketolase, pyrimidine binding domain D3093_RS12740 PF02780 Transketolase, C-terminal domain D3093_RS12745 PF00456 Transketolase, thiamine diphosphate binding domain D3093_RS12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12755 PF03466 LysR substrate binding domain D3093_RS12760 PF00440 Bacterial regulatory proteins, tetR family D3093_RS12785 PF02465 Flagellar hook-associated protein 2 N-terminus D3093_RS12785 PF07195 Flagellar hook-associated protein 2 C-terminus D3093_RS12785 PF07196 Flagellin hook IN motif D3093_RS12790 PF00700 Bacterial flagellin C-terminal helical region D3093_RS12790 PF00669 Bacterial flagellin N-terminal helical region D3093_RS12815 PF07559 Flagellar basal body protein FlaE D3093_RS12815 PF00460 Flagella basal body rod protein D3093_RS12815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS12820 PF13861 FlgD Tudor-like domain D3093_RS12820 PF03963 Flagellar hook capping protein - N-terminal region D3093_RS12820 PF13860 FlgD Ig-like domain D3093_RS12830 PF07687 Peptidase dimerisation domain D3093_RS12830 PF01546 Peptidase family M20/M25/M40 D3093_RS12835 PF00491 Arginase family D3093_RS12840 PF01042 Endoribonuclease L-PSP D3093_RS12845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS12845 PF00005 ABC transporter D3093_RS12850 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS12855 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS12860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS12870 PF03466 LysR substrate binding domain D3093_RS12880 PF00106 short chain dehydrogenase D3093_RS12885 PF04542 Sigma-70 region 2 D3093_RS12885 PF08281 Sigma-70, region 4 D3093_RS12895 PF00072 Response regulator receiver domain D3093_RS12895 PF01339 CheB methylesterase D3093_RS12900 PF00072 Response regulator receiver domain D3093_RS12900 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS12900 PF01627 Hpt domain D3093_RS12900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS12900 PF00672 HAMP domain D3093_RS12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS12905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS12925 PF01593 Flavin containing amine oxidoreductase D3093_RS12930 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS12930 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS12945 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS12945 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS12970 PF07977 FabA-like domain D3093_RS12980 PF00550 Phosphopantetheine attachment site D3093_RS12985 PF00550 Phosphopantetheine attachment site D3093_RS13015 PF00248 Aldo/keto reductase family D3093_RS13020 PF00005 ABC transporter D3093_RS13020 PF00664 ABC transporter transmembrane region D3093_RS13025 PF00158 Sigma-54 interaction domain D3093_RS13025 PF02954 Bacterial regulatory protein, Fis family D3093_RS13025 PF01590 GAF domain D3093_RS13030 PF01513 ATP-NAD kinase D3093_RS13035 PF00676 Dehydrogenase E1 component D3093_RS13040 PF02779 Transketolase, pyrimidine binding domain D3093_RS13040 PF02780 Transketolase, C-terminal domain D3093_RS13045 PF00364 Biotin-requiring enzyme D3093_RS13045 PF00561 alpha/beta hydrolase fold D3093_RS13080 PF18417 L-lysine epsilon oxidase C-terminal domain D3093_RS13080 PF17990 L-Lysine epsilon oxidase N-terminal D3093_RS13085 PF01494 FAD binding domain D3093_RS13100 PF00072 Response regulator receiver domain D3093_RS13100 PF00486 Transcriptional regulatory protein, C terminal D3093_RS13105 PF00072 Response regulator receiver domain D3093_RS13105 PF09308 LuxQ, periplasmic D3093_RS13105 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS13110 PF00034 Cytochrome c D3093_RS13120 PF18364 Molybdopterin oxidoreductase N-terminal domain D3093_RS13120 PF01568 Molydopterin dinucleotide binding domain D3093_RS13120 PF00384 Molybdopterin oxidoreductase D3093_RS13125 PF00440 Bacterial regulatory proteins, tetR family D3093_RS13125 PF16925 Tetracyclin repressor-like, C-terminal domain D3093_RS13130 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS13130 PF00107 Zinc-binding dehydrogenase D3093_RS13150 PF01548 Transposase D3093_RS13150 PF02371 Transposase IS116/IS110/IS902 family D3093_RS13155 PF01119 DNA mismatch repair protein, C-terminal domain D3093_RS13155 PF08676 MutL C terminal dimerisation domain D3093_RS13175 PF00342 Phosphoglucose isomerase D3093_RS13180 PF05193 Peptidase M16 inactive domain D3093_RS13185 PF00675 Insulinase (Peptidase family M16) D3093_RS13185 PF05193 Peptidase M16 inactive domain D3093_RS13195 PF01252 Signal peptidase (SPase) II D3093_RS13200 PF08264 Anticodon-binding domain of tRNA D3093_RS13200 PF00133 tRNA synthetases class I (I, L, M and V) D3093_RS13205 PF00156 Phosphoribosyl transferase domain D3093_RS13210 PF06574 FAD synthetase D3093_RS13210 PF01687 Riboflavin kinase D3093_RS13215 PF01575 MaoC like domain D3093_RS13220 PF00106 short chain dehydrogenase D3093_RS13225 PF03330 Lytic transglycolase D3093_RS13225 PF05036 Sporulation related domain D3093_RS13250 PF08471 Class II vitamin B12-dependent ribonucleotide reductase D3093_RS13250 PF02867 Ribonucleotide reductase, barrel domain D3093_RS13255 PF01814 Hemerythrin HHE cation binding domain D3093_RS13280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D3093_RS13290 PF02515 CoA-transferase family III D3093_RS13300 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS13300 PF07724 AAA domain (Cdc48 subfamily) D3093_RS13300 PF17871 AAA lid domain D3093_RS13300 PF02861 Clp amino terminal domain, pathogenicity island component D3093_RS13300 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS13305 PF02617 ATP-dependent Clp protease adaptor protein ClpS D3093_RS13330 PF00768 D-alanyl-D-alanine carboxypeptidase D3093_RS13330 PF07943 Penicillin-binding protein 5, C-terminal domain D3093_RS13335 PF12849 PBP superfamily domain D3093_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS13345 PF02634 FdhD/NarQ family D3093_RS13350 PF12804 MobA-like NTP transferase domain D3093_RS13375 PF01568 Molydopterin dinucleotide binding domain D3093_RS13375 PF00384 Molybdopterin oxidoreductase D3093_RS13375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS13380 PF13247 4Fe-4S dicluster domain D3093_RS13405 PF00596 Class II Aldolase and Adducin N-terminal domain D3093_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS13410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS13410 PF00072 Response regulator receiver domain D3093_RS13410 PF01627 Hpt domain D3093_RS13410 PF00672 HAMP domain D3093_RS13410 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS13415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D3093_RS13420 PF00430 ATP synthase B/B' CF(0) D3093_RS13425 PF00430 ATP synthase B/B' CF(0) D3093_RS13430 PF00137 ATP synthase subunit C D3093_RS13435 PF00119 ATP synthase A chain D3093_RS13445 PF02630 SCO1/SenC D3093_RS13455 PF08269 Cache domain D3093_RS13455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13460 PF02562 PhoH-like protein D3093_RS13470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3093_RS13475 PF03776 Septum formation topological specificity factor MinE D3093_RS13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13495 PF17200 Single Cache domain 2 D3093_RS13495 PF00672 HAMP domain D3093_RS13495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3093_RS13500 PF13378 Enolase C-terminal domain-like D3093_RS13505 PF00266 Aminotransferase class-V D3093_RS13515 PF01329 Pterin 4 alpha carbinolamine dehydratase D3093_RS13525 PF02685 Glucokinase D3093_RS13530 PF00982 Glycosyltransferase family 20 D3093_RS13545 PF08269 Cache domain D3093_RS13545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13550 PF01274 Malate synthase D3093_RS13555 PF14490 Helix-hairpin-helix containing domain D3093_RS13555 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D3093_RS13555 PF13538 UvrD-like helicase C-terminal domain D3093_RS13560 PF00313 'Cold-shock' DNA-binding domain D3093_RS13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS13570 PF00672 HAMP domain D3093_RS13570 PF01627 Hpt domain D3093_RS13570 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS13570 PF00072 Response regulator receiver domain D3093_RS13570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS13575 PF12729 Four helix bundle sensory module for signal transduction D3093_RS13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13575 PF00672 HAMP domain D3093_RS13590 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS13595 PF00766 Electron transfer flavoprotein FAD-binding domain D3093_RS13595 PF01012 Electron transfer flavoprotein domain D3093_RS13600 PF01012 Electron transfer flavoprotein domain D3093_RS13605 PF03206 Nitrogen fixation protein NifW D3093_RS13610 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS13615 PF00682 HMGL-like D3093_RS13620 PF00266 Aminotransferase class-V D3093_RS13625 PF01106 NifU-like domain D3093_RS13625 PF01592 NifU-like N terminal domain D3093_RS13625 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS13630 PF01521 Iron-sulphur cluster biosynthesis D3093_RS13645 PF13237 4Fe-4S dicluster domain D3093_RS13650 PF05082 Rop-like D3093_RS13655 PF03270 Protein of unknown function, DUF269 D3093_RS13660 PF02579 Dinitrogenase iron-molybdenum cofactor D3093_RS13665 PF00148 Nitrogenase component 1 type Oxidoreductase D3093_RS13670 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS13670 PF00148 Nitrogenase component 1 type Oxidoreductase D3093_RS13675 PF13426 PAS domain D3093_RS13675 PF08447 PAS fold D3093_RS13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS13680 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS13690 PF00148 Nitrogenase component 1 type Oxidoreductase D3093_RS13690 PF11844 Domain of unknown function (DUF3364) D3093_RS13695 PF00148 Nitrogenase component 1 type Oxidoreductase D3093_RS13700 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family D3093_RS13710 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) D3093_RS13715 PF03747 ADP-ribosylglycohydrolase D3093_RS13720 PF03960 ArsC family D3093_RS13725 PF13230 Glutamine amidotransferases class-II D3093_RS13730 PF02525 Flavodoxin-like fold D3093_RS13740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3093_RS13750 PF06988 NifT/FixU protein D3093_RS13755 PF00266 Aminotransferase class-V D3093_RS13765 PF04319 NifZ domain D3093_RS13770 PF05484 LRV protein FeS4 cluster D3093_RS13770 PF01816 Leucine rich repeat variant D3093_RS13780 PF12838 4Fe-4S dicluster domain D3093_RS13785 PF02579 Dinitrogenase iron-molybdenum cofactor D3093_RS13785 PF04055 Radical SAM superfamily D3093_RS13790 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS13795 PF00158 Sigma-54 interaction domain D3093_RS13795 PF02954 Bacterial regulatory protein, Fis family D3093_RS13795 PF13185 GAF domain D3093_RS13800 PF08362 YcdC-like protein, C-terminal region D3093_RS13800 PF00440 Bacterial regulatory proteins, tetR family D3093_RS13810 PF00005 ABC transporter D3093_RS13820 PF03411 Penicillin-insensitive murein endopeptidase D3093_RS13830 PF00444 Ribosomal protein L36 D3093_RS13840 PF01565 FAD binding domain D3093_RS13840 PF02913 FAD linked oxidases, C-terminal domain D3093_RS13845 PF01565 FAD binding domain D3093_RS13850 PF13183 4Fe-4S dicluster domain D3093_RS13850 PF02754 Cysteine-rich domain D3093_RS13855 PF01066 CDP-alcohol phosphatidyltransferase D3093_RS13870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS13870 PF12806 Acetyl-CoA dehydrogenase C-terminal like D3093_RS13870 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS13870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS13885 PF02913 FAD linked oxidases, C-terminal domain D3093_RS13885 PF01565 FAD binding domain D3093_RS13890 PF01300 Telomere recombination D3093_RS13890 PF03481 Putative GTP-binding controlling metal-binding D3093_RS13895 PF13614 AAA domain D3093_RS13905 PF00578 AhpC/TSA family D3093_RS13910 PF03710 Glutamate-ammonia ligase adenylyltransferase D3093_RS13910 PF08335 GlnD PII-uridylyltransferase D3093_RS13920 PF00579 tRNA synthetases class I (W and Y) D3093_RS13925 PF03702 Anhydro-N-acetylmuramic acid kinase D3093_RS13930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D3093_RS13935 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS13940 PF02082 Transcriptional regulator D3093_RS13945 PF00266 Aminotransferase class-V D3093_RS13950 PF00226 DnaJ domain D3093_RS13950 PF07743 HSCB C-terminal oligomerisation domain D3093_RS13955 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS13980 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS13980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS13985 PF00664 ABC transporter transmembrane region D3093_RS13985 PF00005 ABC transporter D3093_RS14005 PF00106 short chain dehydrogenase D3093_RS14010 PF03466 LysR substrate binding domain D3093_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS14020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS14020 PF00034 Cytochrome c D3093_RS14020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS14025 PF01799 [2Fe-2S] binding domain D3093_RS14025 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS14035 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14035 PF00989 PAS fold D3093_RS14035 PF16736 Single Cache-like D3093_RS14035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14045 PF00072 Response regulator receiver domain D3093_RS14060 PF04891 NifQ D3093_RS14070 PF01894 Uncharacterised protein family UPF0047 D3093_RS14080 PF13406 Transglycosylase SLT domain D3093_RS14100 PF00465 Iron-containing alcohol dehydrogenase D3093_RS14125 PF13439 Glycosyltransferase Family 4 D3093_RS14125 PF00534 Glycosyl transferases group 1 D3093_RS14150 PF00206 Lyase D3093_RS14150 PF10415 Fumarase C C-terminus D3093_RS14210 PF07690 Major Facilitator Superfamily D3093_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14215 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14220 PF04364 DNA polymerase III chi subunit, HolC D3093_RS14225 PF00883 Cytosol aminopeptidase family, catalytic domain D3093_RS14225 PF02789 Cytosol aminopeptidase family, N-terminal domain D3093_RS14235 PF00639 PPIC-type PPIASE domain D3093_RS14235 PF09312 SurA N-terminal domain D3093_RS14240 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D3093_RS14245 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14245 PF00989 PAS fold D3093_RS14255 PF01464 Transglycosylase SLT domain D3093_RS14270 PF00398 Ribosomal RNA adenine dimethylase D3093_RS14275 PF00625 Guanylate kinase D3093_RS14280 PF08340 Domain of unknown function (DUF1732) D3093_RS14280 PF03755 YicC-like family, N-terminal region D3093_RS14285 PF00106 short chain dehydrogenase D3093_RS14290 PF00398 Ribosomal RNA adenine dimethylase D3093_RS14295 PF06055 Exopolysaccharide synthesis, ExoD D3093_RS14300 PF12848 ABC transporter D3093_RS14300 PF00005 ABC transporter D3093_RS14305 PF00334 Nucleoside diphosphate kinase D3093_RS14320 PF00551 Formyl transferase D3093_RS14325 PF00586 AIR synthase related protein, N-terminal domain D3093_RS14325 PF02769 AIR synthase related protein, C-terminal domain D3093_RS14335 PF01066 CDP-alcohol phosphatidyltransferase D3093_RS14340 PF01594 AI-2E family transporter D3093_RS14350 PF00106 short chain dehydrogenase D3093_RS14355 PF02525 Flavodoxin-like fold D3093_RS14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS14365 PF03466 LysR substrate binding domain D3093_RS14370 PF01928 CYTH domain D3093_RS14380 PF02503 Polyphosphate kinase middle domain D3093_RS14380 PF17941 Polyphosphate kinase C-terminal domain 1 D3093_RS14380 PF13089 Polyphosphate kinase N-terminal domain D3093_RS14380 PF13090 Polyphosphate kinase C-terminal domain 2 D3093_RS14385 PF02541 Ppx/GppA phosphatase family D3093_RS14395 PF01612 3'-5' exonuclease D3093_RS14395 PF00570 HRDC domain D3093_RS14400 PF02938 GAD domain D3093_RS14400 PF00152 tRNA synthetases class II (D, K and N) D3093_RS14400 PF01336 OB-fold nucleic acid binding domain D3093_RS14415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS14415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS14425 PF05231 MASE1 D3093_RS14425 PF08447 PAS fold D3093_RS14425 PF08448 PAS fold D3093_RS14425 PF13426 PAS domain D3093_RS14425 PF00563 EAL domain D3093_RS14425 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS14430 PF00989 PAS fold D3093_RS14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14430 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14435 PF00072 Response regulator receiver domain D3093_RS14440 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS14440 PF00072 Response regulator receiver domain D3093_RS14445 PF00471 Ribosomal protein L33 D3093_RS14450 PF13180 PDZ domain D3093_RS14450 PF03572 Peptidase family S41 D3093_RS14455 PF00773 RNB domain D3093_RS14455 PF00575 S1 RNA binding domain D3093_RS14455 PF17876 Cold shock domain D3093_RS14455 PF08206 Ribonuclease B OB domain D3093_RS14455 PF08461 Ribonuclease R winged-helix domain D3093_RS14470 PF13368 Topoisomerase C-terminal repeat D3093_RS14470 PF01396 Topoisomerase DNA binding C4 zinc finger D3093_RS14470 PF01131 DNA topoisomerase D3093_RS14470 PF01751 Toprim domain D3093_RS14475 PF17782 DprA winged helix domain D3093_RS14475 PF02481 DNA recombination-mediator protein A D3093_RS14495 PF07690 Major Facilitator Superfamily D3093_RS14530 PF00072 Response regulator receiver domain D3093_RS14530 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14530 PF00989 PAS fold D3093_RS14530 PF01627 Hpt domain D3093_RS14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14530 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS14535 PF00486 Transcriptional regulatory protein, C terminal D3093_RS14535 PF00072 Response regulator receiver domain D3093_RS14565 PF01177 Asp/Glu/Hydantoin racemase D3093_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14585 PF00005 ABC transporter D3093_RS14585 PF08402 TOBE domain D3093_RS14595 PF00762 Ferrochelatase D3093_RS14600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3093_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14610 PF00005 ABC transporter D3093_RS14615 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14625 PF04972 BON domain D3093_RS14625 PF01476 LysM domain D3093_RS14630 PF00595 PDZ domain D3093_RS14640 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS14645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS14645 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D3093_RS14650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3093_RS14650 PF00356 Bacterial regulatory proteins, lacI family D3093_RS14660 PF00920 Dehydratase family D3093_RS14665 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS14670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3093_RS14670 PF00356 Bacterial regulatory proteins, lacI family D3093_RS14675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS14675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS14680 PF00005 ABC transporter D3093_RS14690 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS14705 PF00994 Probable molybdopterin binding domain D3093_RS14705 PF03453 MoeA N-terminal region (domain I and II) D3093_RS14705 PF03454 MoeA C-terminal region (domain IV) D3093_RS14730 PF00106 short chain dehydrogenase D3093_RS14735 PF01925 Sulfite exporter TauE/SafE D3093_RS14750 PF00692 dUTPase D3093_RS14760 PF13417 Glutathione S-transferase, N-terminal domain D3093_RS14760 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS14765 PF00753 Metallo-beta-lactamase superfamily D3093_RS14765 PF16123 Hydroxyacylglutathione hydrolase C-terminus D3093_RS14785 PF00561 alpha/beta hydrolase fold D3093_RS14785 PF07021 Methionine biosynthesis protein MetW D3093_RS14790 PF00561 alpha/beta hydrolase fold D3093_RS14800 PF00155 Aminotransferase class I and II D3093_RS14805 PF02153 Prephenate dehydrogenase D3093_RS14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS14820 PF03466 LysR substrate binding domain D3093_RS14825 PF10417 C-terminal domain of 1-Cys peroxiredoxin D3093_RS14825 PF00578 AhpC/TSA family D3093_RS14830 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS14830 PF13192 Thioredoxin domain D3093_RS14835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS14835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS14840 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS14840 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS14845 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS14845 PF01799 [2Fe-2S] binding domain D3093_RS14855 PF04307 LexA-binding, inner membrane-associated putative hydrolase D3093_RS14865 PF07883 Cupin domain D3093_RS14875 PF00072 Response regulator receiver domain D3093_RS14875 PF00486 Transcriptional regulatory protein, C terminal D3093_RS14880 PF02660 Glycerol-3-phosphate acyltransferase D3093_RS14885 PF01979 Amidohydrolase family D3093_RS14890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3093_RS14890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3093_RS14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS14905 PF03466 LysR substrate binding domain D3093_RS14920 PF13847 Methyltransferase domain D3093_RS14935 PF03652 Holliday junction resolvase D3093_RS14940 PF08269 Cache domain D3093_RS14940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS14945 PF02686 Glu-tRNAGln amidotransferase C subunit D3093_RS14950 PF01425 Amidase D3093_RS14955 PF02637 GatB domain D3093_RS14955 PF02934 GatB/GatE catalytic domain D3093_RS14960 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS14975 PF02899 Phage integrase, N-terminal SAM-like domain D3093_RS14975 PF00589 Phage integrase family D3093_RS15070 PF00589 Phage integrase family D3093_RS15085 PF01555 DNA methylase D3093_RS15085 PF18755 Restriction Enzyme Adenine Methylase Associated D3093_RS15105 PF03354 Phage Terminase D3093_RS15250 PF07726 ATPase family associated with various cellular activities (AAA) D3093_RS15250 PF17863 AAA lid domain D3093_RS15260 PF00293 NUDIX domain D3093_RS15270 PF01743 Poly A polymerase head domain D3093_RS15270 PF13735 tRNA nucleotidyltransferase domain 2 putative D3093_RS15270 PF12627 Probable RNA and SrmB- binding site of polymerase A D3093_RS15275 PF01218 Coproporphyrinogen III oxidase D3093_RS15280 PF00588 SpoU rRNA Methylase family D3093_RS15285 PF00355 Rieske [2Fe-2S] domain D3093_RS15285 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D3093_RS15290 PF00032 Cytochrome b(C-terminal)/b6/petD D3093_RS15290 PF00033 Cytochrome b/b6/petB D3093_RS15295 PF00032 Cytochrome b(C-terminal)/b6/petD D3093_RS15295 PF02167 Cytochrome C1 family D3093_RS15295 PF00033 Cytochrome b/b6/petB D3093_RS15305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS15305 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS15305 PF01627 Hpt domain D3093_RS15305 PF00672 HAMP domain D3093_RS15305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS15305 PF00072 Response regulator receiver domain D3093_RS15315 PF01022 Bacterial regulatory protein, arsR family D3093_RS15325 PF01206 Sulfurtransferase TusA D3093_RS15330 PF00850 Histone deacetylase domain D3093_RS15335 PF02609 Exonuclease VII small subunit D3093_RS15340 PF00348 Polyprenyl synthetase D3093_RS15345 PF02779 Transketolase, pyrimidine binding domain D3093_RS15345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D3093_RS15345 PF02780 Transketolase, C-terminal domain D3093_RS15355 PF01479 S4 domain D3093_RS15355 PF01728 FtsJ-like methyltransferase D3093_RS15390 PF03050 Transposase IS66 family D3093_RS15390 PF13007 Transposase C of IS166 homeodomain D3093_RS15390 PF13005 zinc-finger binding domain of transposase IS66 D3093_RS15390 PF13817 IS66 C-terminal element D3093_RS15440 PF02687 FtsX-like permease family D3093_RS15440 PF12704 MacB-like periplasmic core domain D3093_RS15440 PF00005 ABC transporter D3093_RS15445 PF12704 MacB-like periplasmic core domain D3093_RS15445 PF00005 ABC transporter D3093_RS15445 PF02687 FtsX-like permease family D3093_RS15475 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS15485 PF00005 ABC transporter D3093_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS15495 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS15500 PF02615 Malate/L-lactate dehydrogenase D3093_RS15525 PF02887 Pyruvate kinase, alpha/beta domain D3093_RS15525 PF00224 Pyruvate kinase, barrel domain D3093_RS15530 PF00248 Aldo/keto reductase family D3093_RS15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS15535 PF03466 LysR substrate binding domain D3093_RS15540 PF00149 Calcineurin-like phosphoesterase D3093_RS15575 PF01814 Hemerythrin HHE cation binding domain D3093_RS15595 PF00156 Phosphoribosyl transferase domain D3093_RS15600 PF02405 Permease MlaE D3093_RS15605 PF00005 ABC transporter D3093_RS15625 PF00140 Sigma-70 factor, region 1.2 D3093_RS15625 PF04542 Sigma-70 region 2 D3093_RS15625 PF04545 Sigma-70, region 4 D3093_RS15630 PF01654 Cytochrome bd terminal oxidase subunit I D3093_RS15635 PF02322 Cytochrome bd terminal oxidase subunit II D3093_RS15655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3093_RS15655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3093_RS15675 PF12804 MobA-like NTP transferase domain D3093_RS15675 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS15690 PF08666 SAF domain D3093_RS15690 PF03102 NeuB family D3093_RS15695 PF02348 Cytidylyltransferase D3093_RS15705 PF00364 Biotin-requiring enzyme D3093_RS15705 PF00561 alpha/beta hydrolase fold D3093_RS15715 PF00501 AMP-binding enzyme D3093_RS15715 PF13193 AMP-binding enzyme C-terminal domain D3093_RS15725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D3093_RS15725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D3093_RS15730 PF00700 Bacterial flagellin C-terminal helical region D3093_RS15730 PF00669 Bacterial flagellin N-terminal helical region D3093_RS15770 PF04972 BON domain D3093_RS15775 PF01520 N-acetylmuramoyl-L-alanine amidase D3093_RS15800 PF00551 Formyl transferase D3093_RS15805 PF00072 Response regulator receiver domain D3093_RS15820 PF13193 AMP-binding enzyme C-terminal domain D3093_RS15820 PF00501 AMP-binding enzyme D3093_RS15840 PF01979 Amidohydrolase family D3093_RS15855 PF17391 Urocanase N-terminal domain D3093_RS15855 PF17392 Urocanase C-terminal domain D3093_RS15855 PF01175 Urocanase Rossmann-like domain D3093_RS15860 PF00892 EamA-like transporter family D3093_RS15870 PF08241 Methyltransferase domain D3093_RS15880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS15890 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS15895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS15895 PF00005 ABC transporter D3093_RS15900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS15900 PF00005 ABC transporter D3093_RS15940 PF04461 Protein of unknown function (DUF520) D3093_RS15955 PF00072 Response regulator receiver domain D3093_RS15955 PF02954 Bacterial regulatory protein, Fis family D3093_RS15955 PF00158 Sigma-54 interaction domain D3093_RS15960 PF00140 Sigma-70 factor, region 1.2 D3093_RS15960 PF04545 Sigma-70, region 4 D3093_RS15960 PF04542 Sigma-70 region 2 D3093_RS15965 PF03707 Bacterial signalling protein N terminal repeat D3093_RS15965 PF00563 EAL domain D3093_RS15965 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS15970 PF02080 TrkA-C domain D3093_RS15970 PF00999 Sodium/hydrogen exchanger family D3093_RS15970 PF03471 Transporter associated domain D3093_RS15995 PF01734 Patatin-like phospholipase D3093_RS16000 PF00005 ABC transporter D3093_RS16000 PF00664 ABC transporter transmembrane region D3093_RS16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16005 PF00989 PAS fold D3093_RS16005 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS16030 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D3093_RS16045 PF03466 LysR substrate binding domain D3093_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS16050 PF03358 NADPH-dependent FMN reductase D3093_RS16055 PF13409 Glutathione S-transferase, N-terminal domain D3093_RS16065 PF00072 Response regulator receiver domain D3093_RS16065 PF00196 Bacterial regulatory proteins, luxR family D3093_RS16075 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS16095 PF00226 DnaJ domain D3093_RS16095 PF01556 DnaJ C terminal domain D3093_RS16095 PF00684 DnaJ central domain D3093_RS16105 PF01435 Peptidase family M48 D3093_RS16115 PF01292 Prokaryotic cytochrome b561 D3093_RS16135 PF11154 Protein of unknown function (DUF2934) D3093_RS16135 PF00430 ATP synthase B/B' CF(0) D3093_RS16145 PF05362 Lon protease (S16) C-terminal proteolytic domain D3093_RS16145 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS16145 PF02190 ATP-dependent protease La (LON) substrate-binding domain D3093_RS16155 PF12802 MarR family D3093_RS16165 PF07568 Histidine kinase D3093_RS16165 PF13581 Histidine kinase-like ATPase domain D3093_RS16165 PF13426 PAS domain D3093_RS16180 PF01192 RNA polymerase Rpb6 D3093_RS16185 PF13291 ACT domain D3093_RS16185 PF04607 Region found in RelA / SpoT proteins D3093_RS16185 PF02824 TGS domain D3093_RS16195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D3093_RS16200 PF01648 4'-phosphopantetheinyl transferase superfamily D3093_RS16205 PF10502 Signal peptidase, peptidase S26 D3093_RS16210 PF00035 Double-stranded RNA binding motif D3093_RS16210 PF14622 Ribonuclease-III-like D3093_RS16215 PF07650 KH domain D3093_RS16215 PF01926 50S ribosome-binding GTPase D3093_RS16225 PF05128 Domain of unknown function (DUF697) D3093_RS16245 PF00574 Clp protease D3093_RS16250 PF00535 Glycosyl transferase family 2 D3093_RS16255 PF00149 Calcineurin-like phosphoesterase D3093_RS16260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS16265 PF00873 AcrB/AcrD/AcrF family D3093_RS16270 PF08379 Bacterial transglutaminase-like N-terminal region D3093_RS16270 PF01841 Transglutaminase-like superfamily D3093_RS16275 PF04168 A predicted alpha-helical domain with a conserved ER motif. D3093_RS16275 PF14403 Circularly permuted ATP-grasp type 2 D3093_RS16295 PF01263 Aldose 1-epimerase D3093_RS16305 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D3093_RS16315 PF13617 YnbE-like lipoprotein D3093_RS16335 PF04453 LPS transport system D D3093_RS16335 PF03968 OstA-like protein D3093_RS16345 PF00271 Helicase conserved C-terminal domain D3093_RS16345 PF00270 DEAD/DEAH box helicase D3093_RS16355 PF12697 Alpha/beta hydrolase family D3093_RS16365 PF00204 DNA gyrase B D3093_RS16365 PF00986 DNA gyrase B subunit, carboxyl terminus D3093_RS16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16365 PF01751 Toprim domain D3093_RS16370 PF03061 Thioesterase superfamily D3093_RS16375 PF04977 Septum formation initiator D3093_RS16380 PF00676 Dehydrogenase E1 component D3093_RS16385 PF00364 Biotin-requiring enzyme D3093_RS16385 PF02779 Transketolase, pyrimidine binding domain D3093_RS16385 PF02780 Transketolase, C-terminal domain D3093_RS16390 PF00364 Biotin-requiring enzyme D3093_RS16390 PF02817 e3 binding domain D3093_RS16390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3093_RS16395 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS16395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3093_RS16400 PF04055 Radical SAM superfamily D3093_RS16400 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D3093_RS16405 PF03364 Polyketide cyclase / dehydrase and lipid transport D3093_RS16410 PF18146 Damage-inducible protein CinA KH domain D3093_RS16410 PF00994 Probable molybdopterin binding domain D3093_RS16410 PF02464 Competence-damaged protein D3093_RS16415 PF02542 YgbB family D3093_RS16415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D3093_RS16420 PF01578 Cytochrome C assembly protein D3093_RS16425 PF01207 Dihydrouridine synthase (Dus) D3093_RS16430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16430 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS16430 PF00989 PAS fold D3093_RS16435 PF02954 Bacterial regulatory protein, Fis family D3093_RS16435 PF00158 Sigma-54 interaction domain D3093_RS16435 PF00072 Response regulator receiver domain D3093_RS16440 PF00672 HAMP domain D3093_RS16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16445 PF02954 Bacterial regulatory protein, Fis family D3093_RS16445 PF00072 Response regulator receiver domain D3093_RS16445 PF00158 Sigma-54 interaction domain D3093_RS16450 PF02254 TrkA-N domain D3093_RS16450 PF02080 TrkA-C domain D3093_RS16455 PF01063 Amino-transferase class IV D3093_RS16465 PF17209 Hfq protein D3093_RS16470 PF16360 GTP-binding GTPase Middle Region D3093_RS16470 PF01926 50S ribosome-binding GTPase D3093_RS16470 PF13167 GTP-binding GTPase N-terminal D3093_RS16485 PF00459 Inositol monophosphatase family D3093_RS16500 PF03819 MazG nucleotide pyrophosphohydrolase domain D3093_RS16505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3093_RS16510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D3093_RS16515 PF00361 Proton-conducting membrane transporter D3093_RS16525 PF00146 NADH dehydrogenase D3093_RS16530 PF00361 Proton-conducting membrane transporter D3093_RS16535 PF09371 Tex-like protein N-terminal domain D3093_RS16535 PF00575 S1 RNA binding domain D3093_RS16535 PF16921 Tex protein YqgF-like domain D3093_RS16535 PF17674 HHH domain D3093_RS16540 PF03707 Bacterial signalling protein N terminal repeat D3093_RS16540 PF00563 EAL domain D3093_RS16540 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS16545 PF01810 LysE type translocator D3093_RS16575 PF01906 Putative heavy-metal-binding D3093_RS16580 PF00561 alpha/beta hydrolase fold D3093_RS16590 PF00072 Response regulator receiver domain D3093_RS16595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS16600 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS16600 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS16605 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS16610 PF00128 Alpha amylase, catalytic domain D3093_RS16630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS16630 PF17200 Single Cache domain 2 D3093_RS16630 PF00672 HAMP domain D3093_RS16650 PF00873 AcrB/AcrD/AcrF family D3093_RS16665 PF00873 AcrB/AcrD/AcrF family D3093_RS16670 PF13533 Biotin-lipoyl like D3093_RS16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS16675 PF03466 LysR substrate binding domain D3093_RS16680 PF07286 Protein of unknown function (DUF1445) D3093_RS16695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS16700 PF02682 Carboxyltransferase domain, subdomain C and D D3093_RS16705 PF02626 Carboxyltransferase domain, subdomain A and B D3093_RS16710 PF03746 LamB/YcsF family D3093_RS16715 PF02954 Bacterial regulatory protein, Fis family D3093_RS16715 PF00158 Sigma-54 interaction domain D3093_RS16715 PF00072 Response regulator receiver domain D3093_RS16720 PF08447 PAS fold D3093_RS16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16720 PF08448 PAS fold D3093_RS16725 PF16658 Class II release factor RF3, C-terminal domain D3093_RS16725 PF00009 Elongation factor Tu GTP binding domain D3093_RS16730 PF01118 Semialdehyde dehydrogenase, NAD binding domain D3093_RS16730 PF02774 Semialdehyde dehydrogenase, dimerisation domain D3093_RS16735 PF00343 Carbohydrate phosphorylase D3093_RS16760 PF08281 Sigma-70, region 4 D3093_RS16760 PF04542 Sigma-70 region 2 D3093_RS16785 PF00999 Sodium/hydrogen exchanger family D3093_RS16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16795 PF00072 Response regulator receiver domain D3093_RS16795 PF00486 Transcriptional regulatory protein, C terminal D3093_RS16830 PF02082 Transcriptional regulator D3093_RS16835 PF01458 Uncharacterized protein family (UPF0051) D3093_RS16840 PF00005 ABC transporter D3093_RS16845 PF01458 Uncharacterized protein family (UPF0051) D3093_RS16850 PF00266 Aminotransferase class-V D3093_RS16855 PF01592 NifU-like N terminal domain D3093_RS16865 PF01521 Iron-sulphur cluster biosynthesis D3093_RS16875 PF01433 Peptidase family M1 domain D3093_RS16875 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D3093_RS16875 PF11940 Domain of unknown function (DUF3458) Ig-like fold D3093_RS16880 PF00034 Cytochrome c D3093_RS16895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D3093_RS16930 PF11154 Protein of unknown function (DUF2934) D3093_RS16930 PF00430 ATP synthase B/B' CF(0) D3093_RS16935 PF00892 EamA-like transporter family D3093_RS16940 PF09456 RcsC Alpha-Beta-Loop (ABL) D3093_RS16940 PF00072 Response regulator receiver domain D3093_RS16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS16940 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS16945 PF07690 Major Facilitator Superfamily D3093_RS16950 PF03466 LysR substrate binding domain D3093_RS16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS16960 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3093_RS16960 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3093_RS16960 PF00037 4Fe-4S binding domain D3093_RS16965 PF01568 Molydopterin dinucleotide binding domain D3093_RS16965 PF12838 4Fe-4S dicluster domain D3093_RS16965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3093_RS16965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS16965 PF00384 Molybdopterin oxidoreductase D3093_RS16970 PF02634 FdhD/NarQ family D3093_RS16990 PF18693 TRAM domain D3093_RS16990 PF00919 Uncharacterized protein family UPF0004 D3093_RS16990 PF04055 Radical SAM superfamily D3093_RS16995 PF01588 Putative tRNA binding domain D3093_RS17015 PF01926 50S ribosome-binding GTPase D3093_RS17015 PF16360 GTP-binding GTPase Middle Region D3093_RS17015 PF13167 GTP-binding GTPase N-terminal D3093_RS17025 PF00920 Dehydratase family D3093_RS17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS17040 PF07568 Histidine kinase D3093_RS17040 PF12282 Signal transduction histidine kinase D3093_RS17060 PF00589 Phage integrase family D3093_RS17060 PF14659 Phage integrase, N-terminal SAM-like domain D3093_RS17135 PF01467 Cytidylyltransferase-like D3093_RS17140 PF00521 DNA gyrase/topoisomerase IV, subunit A D3093_RS17140 PF03989 DNA gyrase C-terminal domain, beta-propeller D3093_RS17145 PF01554 MatE D3093_RS17185 PF00436 Single-strand binding protein family D3093_RS17190 PF17755 UvrA DNA-binding domain D3093_RS17190 PF17760 UvrA interaction domain D3093_RS17210 PF01134 Glucose inhibited division protein A D3093_RS17235 PF01593 Flavin containing amine oxidoreductase D3093_RS17240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3093_RS17240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3093_RS17245 PF04430 Protein of unknown function (DUF498/DUF598) D3093_RS17255 PF02699 Preprotein translocase subunit D3093_RS17270 PF01551 Peptidase family M23 D3093_RS17270 PF01476 LysM domain D3093_RS17280 PF01975 Survival protein SurE D3093_RS17285 PF02403 Seryl-tRNA synthetase N-terminal domain D3093_RS17285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D3093_RS17290 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS17295 PF00902 Sec-independent protein translocase protein (TatC) D3093_RS17300 PF02416 mttA/Hcf106 family D3093_RS17305 PF02416 mttA/Hcf106 family D3093_RS17310 PF00005 ABC transporter D3093_RS17310 PF08402 TOBE domain D3093_RS17315 PF04079 Segregation and condensation complex subunit ScpB D3093_RS17320 PF02616 Segregation and condensation protein ScpA D3093_RS17325 PF02163 Peptidase family M50 D3093_RS17330 PF00933 Glycosyl hydrolase family 3 N terminal domain D3093_RS17340 PF00750 tRNA synthetases class I (R) D3093_RS17340 PF05746 DALR anticodon binding domain D3093_RS17340 PF03485 Arginyl tRNA synthetase N terminal domain D3093_RS17345 PF13286 Phosphohydrolase-associated domain D3093_RS17345 PF01966 HD domain D3093_RS17350 PF01521 Iron-sulphur cluster biosynthesis D3093_RS17355 PF03372 Endonuclease/Exonuclease/phosphatase family D3093_RS17375 PF02223 Thymidylate kinase D3093_RS17380 PF04055 Radical SAM superfamily D3093_RS17380 PF06463 Molybdenum Cofactor Synthesis C D3093_RS17395 PF01119 DNA mismatch repair protein, C-terminal domain D3093_RS17395 PF08676 MutL C terminal dimerisation domain D3093_RS17415 PF00145 C-5 cytosine-specific DNA methylase D3093_RS17420 PF03852 DNA mismatch endonuclease Vsr D3093_RS17455 PF00589 Phage integrase family D3093_RS17455 PF13356 Arm DNA-binding domain D3093_RS17460 PF00072 Response regulator receiver domain D3093_RS17460 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS17465 PF00694 Aconitase C-terminal domain D3093_RS17470 PF00330 Aconitase family (aconitate hydratase) D3093_RS17475 PF00890 FAD binding domain D3093_RS17480 PF00857 Isochorismatase family D3093_RS17485 PF05378 Hydantoinase/oxoprolinase N-terminal region D3093_RS17485 PF01968 Hydantoinase/oxoprolinase D3093_RS17490 PF02538 Hydantoinase B/oxoprolinase D3093_RS17505 PF00005 ABC transporter D3093_RS17510 PF00005 ABC transporter D3093_RS17510 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS17515 PF11862 Domain of unknown function (DUF3382) D3093_RS17515 PF02653 Branched-chain amino acid transport system / permease component D3093_RS17520 PF02653 Branched-chain amino acid transport system / permease component D3093_RS17525 PF13458 Periplasmic binding protein D3093_RS17530 PF00392 Bacterial regulatory proteins, gntR family D3093_RS17530 PF07702 UTRA domain D3093_RS17535 PF09723 Zinc ribbon domain D3093_RS17540 PF03069 Acetamidase/Formamidase family D3093_RS17555 PF00005 ABC transporter D3093_RS17560 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS17560 PF00005 ABC transporter D3093_RS17580 PF00072 Response regulator receiver domain D3093_RS17580 PF01627 Hpt domain D3093_RS17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS17580 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS17580 PF18415 Histidine kinase receptor ArcB trans-membrane domain D3093_RS17580 PF00989 PAS fold D3093_RS17585 PF00072 Response regulator receiver domain D3093_RS17590 PF00092 von Willebrand factor type A domain D3093_RS17595 PF08406 CbbQ/NirQ/NorQ C-terminal D3093_RS17595 PF07728 AAA domain (dynein-related subfamily) D3093_RS17600 PF00795 Carbon-nitrogen hydrolase D3093_RS17605 PF00005 ABC transporter D3093_RS17605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS17610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS17610 PF00005 ABC transporter D3093_RS17615 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS17615 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS17620 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS17625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS17695 PF03459 TOBE domain D3093_RS17695 PF00005 ABC transporter D3093_RS17700 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS17710 PF03459 TOBE domain D3093_RS17725 PF03350 Uncharacterized protein family, UPF0114 D3093_RS17800 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3093_RS17805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3093_RS17820 PF05947 Type VI secretion system, TssF D3093_RS17830 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS17830 PF17871 AAA lid domain D3093_RS17830 PF07724 AAA domain (Cdc48 subfamily) D3093_RS17830 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS17835 PF06715 Gp5 C-terminal repeat (3 copies) D3093_RS17835 PF04717 Type VI secretion system, phage-baseplate injector D3093_RS17845 PF01548 Transposase D3093_RS17845 PF02371 Transposase IS116/IS110/IS902 family D3093_RS17855 PF11799 impB/mucB/samB family C-terminal domain D3093_RS17855 PF00817 impB/mucB/samB family D3093_RS17860 PF12973 ChrR Cupin-like domain D3093_RS17865 PF04542 Sigma-70 region 2 D3093_RS17865 PF04545 Sigma-70, region 4 D3093_RS17870 PF13185 GAF domain D3093_RS17870 PF02954 Bacterial regulatory protein, Fis family D3093_RS17870 PF00158 Sigma-54 interaction domain D3093_RS17875 PF01228 Glycine radical D3093_RS17875 PF02901 Pyruvate formate lyase-like D3093_RS17885 PF02470 MlaD protein D3093_RS17890 PF04403 Paraquat-inducible protein A D3093_RS17905 PF03949 Malic enzyme, NAD binding domain D3093_RS17905 PF01515 Phosphate acetyl/butaryl transferase D3093_RS17905 PF00390 Malic enzyme, N-terminal domain D3093_RS17910 PF00375 Sodium:dicarboxylate symporter family D3093_RS17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS17915 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS17920 PF00158 Sigma-54 interaction domain D3093_RS17920 PF00072 Response regulator receiver domain D3093_RS17920 PF02954 Bacterial regulatory protein, Fis family D3093_RS17935 PF01642 Methylmalonyl-CoA mutase D3093_RS17935 PF02310 B12 binding domain D3093_RS17940 PF02632 BioY family D3093_RS17945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3093_RS17945 PF00364 Biotin-requiring enzyme D3093_RS17945 PF18140 Propionyl-coenzyme A carboxylase BT domain D3093_RS17945 PF00289 Biotin carboxylase, N-terminal domain D3093_RS17945 PF02785 Biotin carboxylase C-terminal domain D3093_RS17950 PF01039 Carboxyl transferase domain D3093_RS17955 PF09856 Predicted transcriptional regulator (DUF2083) D3093_RS17955 PF06114 IrrE N-terminal-like domain D3093_RS17955 PF01381 Helix-turn-helix D3093_RS17960 PF01177 Asp/Glu/Hydantoin racemase D3093_RS17970 PF08448 PAS fold D3093_RS17970 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS17970 PF13188 PAS domain D3093_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS17970 PF00072 Response regulator receiver domain D3093_RS17980 PF02540 NAD synthase D3093_RS17980 PF00117 Glutamine amidotransferase class-I D3093_RS17980 PF00958 GMP synthase C terminal domain D3093_RS17985 PF00583 Acetyltransferase (GNAT) family D3093_RS18005 PF01029 NusB family D3093_RS18005 PF01189 16S rRNA methyltransferase RsmB/F D3093_RS18010 PF06725 3D domain D3093_RS18010 PF03562 MltA specific insert domain D3093_RS18020 PF06906 Protein of unknown function (DUF1272) D3093_RS18025 PF02527 rRNA small subunit methyltransferase G D3093_RS18025 PF00588 SpoU rRNA Methylase family D3093_RS18030 PF00478 IMP dehydrogenase / GMP reductase domain D3093_RS18030 PF00571 CBS domain D3093_RS18035 PF01728 FtsJ-like methyltransferase D3093_RS18060 PF06472 ABC transporter transmembrane region 2 D3093_RS18060 PF00005 ABC transporter D3093_RS18065 PF00892 EamA-like transporter family D3093_RS18075 PF05050 Methyltransferase FkbM domain D3093_RS18085 PF13382 Adenine deaminase C-terminal domain D3093_RS18085 PF01979 Amidohydrolase family D3093_RS18100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3093_RS18100 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D3093_RS18105 PF13247 4Fe-4S dicluster domain D3093_RS18110 PF03916 Polysulphide reductase, NrfD D3093_RS18115 PF00374 Nickel-dependent hydrogenase D3093_RS18120 PF01750 Hydrogenase maturation protease D3093_RS18125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3093_RS18125 PF00753 Metallo-beta-lactamase superfamily D3093_RS18125 PF10996 Beta-Casp domain D3093_RS18145 PF01455 HupF/HypC family D3093_RS18155 PF00374 Nickel-dependent hydrogenase D3093_RS18160 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D3093_RS18165 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3093_RS18170 PF07503 HypF finger D3093_RS18170 PF01300 Telomere recombination D3093_RS18170 PF17788 HypF Kae1-like domain D3093_RS18170 PF00708 Acylphosphatase D3093_RS18175 PF01455 HupF/HypC family D3093_RS18180 PF00586 AIR synthase related protein, N-terminal domain D3093_RS18180 PF02769 AIR synthase related protein, C-terminal domain D3093_RS18185 PF02397 Bacterial sugar transferase D3093_RS18190 PF03572 Peptidase family S41 D3093_RS18190 PF13180 PDZ domain D3093_RS18195 PF00313 'Cold-shock' DNA-binding domain D3093_RS18200 PF02810 SEC-C motif D3093_RS18205 PF00027 Cyclic nucleotide-binding domain D3093_RS18205 PF13302 Acetyltransferase (GNAT) domain D3093_RS18210 PF01351 Ribonuclease HII D3093_RS18215 PF01555 DNA methylase D3093_RS18215 PF18755 Restriction Enzyme Adenine Methylase Associated D3093_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS18225 PF08448 PAS fold D3093_RS18225 PF08447 PAS fold D3093_RS18235 PF00633 Helix-hairpin-helix motif D3093_RS18235 PF10576 Iron-sulfur binding domain of endonuclease III D3093_RS18235 PF00730 HhH-GPD superfamily base excision DNA repair protein D3093_RS18235 PF14815 NUDIX domain D3093_RS18250 PF02463 RecF/RecN/SMC N terminal domain D3093_RS18255 PF01266 FAD dependent oxidoreductase D3093_RS18265 PF03922 OmpW family D3093_RS18275 PF00196 Bacterial regulatory proteins, luxR family D3093_RS18275 PF00072 Response regulator receiver domain D3093_RS18280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS18280 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS18280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS18280 PF12806 Acetyl-CoA dehydrogenase C-terminal like D3093_RS18285 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS18285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3093_RS18285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3093_RS18290 PF02803 Thiolase, C-terminal domain D3093_RS18290 PF00108 Thiolase, N-terminal domain D3093_RS18295 PF09278 MerR, DNA binding D3093_RS18295 PF00376 MerR family regulatory protein D3093_RS18305 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D3093_RS18305 PF00207 Alpha-2-macroglobulin family D3093_RS18305 PF07703 Alpha-2-macroglobulin bait region domain D3093_RS18305 PF17962 Bacterial macroglobulin domain 6 D3093_RS18305 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D3093_RS18305 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D3093_RS18305 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D3093_RS18305 PF01835 MG2 domain D3093_RS18310 PF00989 PAS fold D3093_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS18310 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS18315 PF00155 Aminotransferase class I and II D3093_RS18330 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS18340 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS18345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS18350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS18355 PF01380 SIS domain D3093_RS18355 PF02685 Glucokinase D3093_RS18355 PF01418 Helix-turn-helix domain, rpiR family D3093_RS18360 PF01207 Dihydrouridine synthase (Dus) D3093_RS18370 PF00255 Glutathione peroxidase D3093_RS18375 PF07690 Major Facilitator Superfamily D3093_RS18385 PF00924 Mechanosensitive ion channel D3093_RS18385 PF12794 Mechanosensitive ion channel inner membrane domain 1 D3093_RS18385 PF12795 Mechanosensitive ion channel porin domain D3093_RS18435 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS18435 PF00107 Zinc-binding dehydrogenase D3093_RS18440 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS18450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS18455 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3093_RS18455 PF08666 SAF domain D3093_RS18460 PF01232 Mannitol dehydrogenase Rossmann domain D3093_RS18460 PF08125 Mannitol dehydrogenase C-terminal domain D3093_RS18485 PF16868 NMT1-like family D3093_RS18490 PF00756 Putative esterase D3093_RS18495 PF00107 Zinc-binding dehydrogenase D3093_RS18495 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS18500 PF03466 LysR substrate binding domain D3093_RS18500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS18510 PF04143 Sulphur transport D3093_RS18515 PF00999 Sodium/hydrogen exchanger family D3093_RS18525 PF08402 TOBE domain D3093_RS18525 PF00005 ABC transporter D3093_RS18530 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS18550 PF07943 Penicillin-binding protein 5, C-terminal domain D3093_RS18550 PF00768 D-alanyl-D-alanine carboxypeptidase D3093_RS18575 PF00672 HAMP domain D3093_RS18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS18575 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS18575 PF00072 Response regulator receiver domain D3093_RS18575 PF01627 Hpt domain D3093_RS18575 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS18590 PF01381 Helix-turn-helix D3093_RS18595 PF01514 Secretory protein of YscJ/FliF family D3093_RS18595 PF08345 Flagellar M-ring protein C-terminal D3093_RS18605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3093_RS18610 PF01618 MotA/TolQ/ExbB proton channel family D3093_RS18615 PF02954 Bacterial regulatory protein, Fis family D3093_RS18615 PF00158 Sigma-54 interaction domain D3093_RS18625 PF00448 SRP54-type protein, GTPase domain D3093_RS18625 PF02881 SRP54-type protein, helical bundle domain D3093_RS18630 PF10609 NUBPL iron-transfer P-loop NTPase D3093_RS18645 PF00563 EAL domain D3093_RS18645 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS18645 PF03707 Bacterial signalling protein N terminal repeat D3093_RS18655 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3093_RS18655 PF18269 T3SS EscN ATPase C-terminal domain D3093_RS18655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3093_RS18660 PF00486 Transcriptional regulatory protein, C terminal D3093_RS18660 PF00072 Response regulator receiver domain D3093_RS18670 PF03466 LysR substrate binding domain D3093_RS18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS18675 PF01739 CheR methyltransferase, SAM binding domain D3093_RS18675 PF03705 CheR methyltransferase, all-alpha domain D3093_RS18680 PF01339 CheB methylesterase D3093_RS18680 PF00072 Response regulator receiver domain D3093_RS18685 PF01584 CheW-like domain D3093_RS18685 PF02895 Signal transducing histidine kinase, homodimeric domain D3093_RS18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS18685 PF01627 Hpt domain D3093_RS18685 PF00072 Response regulator receiver domain D3093_RS18690 PF01584 CheW-like domain D3093_RS18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS18695 PF02895 Signal transducing histidine kinase, homodimeric domain D3093_RS18695 PF01584 CheW-like domain D3093_RS18695 PF00072 Response regulator receiver domain D3093_RS18695 PF01627 Hpt domain D3093_RS18700 PF10090 Histidine phosphotransferase C-terminal domain D3093_RS18715 PF01804 Penicillin amidase D3093_RS18720 PF13291 ACT domain D3093_RS18720 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS18725 PF01613 Flavin reductase like domain D3093_RS18730 PF00691 OmpA family D3093_RS18730 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3093_RS18735 PF14403 Circularly permuted ATP-grasp type 2 D3093_RS18740 PF04168 A predicted alpha-helical domain with a conserved ER motif. D3093_RS18740 PF14403 Circularly permuted ATP-grasp type 2 D3093_RS18745 PF04376 Arginine-tRNA-protein transferase, N terminus D3093_RS18745 PF04377 Arginine-tRNA-protein transferase, C terminus D3093_RS18755 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS18755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS18760 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS18765 PF03989 DNA gyrase C-terminal domain, beta-propeller D3093_RS18765 PF00521 DNA gyrase/topoisomerase IV, subunit A D3093_RS18770 PF11967 Recombination protein O N terminal D3093_RS18770 PF02565 Recombination protein O C terminal D3093_RS18780 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS18780 PF00563 EAL domain D3093_RS18780 PF08447 PAS fold D3093_RS18780 PF08448 PAS fold D3093_RS18800 PF07690 Major Facilitator Superfamily D3093_RS18805 PF13533 Biotin-lipoyl like D3093_RS18810 PF18665 Tetracyclin repressor-like, C-terminal domain D3093_RS18810 PF00440 Bacterial regulatory proteins, tetR family D3093_RS18820 PF00005 ABC transporter D3093_RS18845 PF02867 Ribonucleotide reductase, barrel domain D3093_RS18845 PF03477 ATP cone domain D3093_RS18845 PF00317 Ribonucleotide reductase, all-alpha domain D3093_RS18850 PF09335 SNARE associated Golgi protein D3093_RS18855 PF00117 Glutamine amidotransferase class-I D3093_RS18855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D3093_RS18860 PF00155 Aminotransferase class I and II D3093_RS18860 PF00392 Bacterial regulatory proteins, gntR family D3093_RS18865 PF03594 Benzoate membrane transport protein D3093_RS18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS18870 PF03466 LysR substrate binding domain D3093_RS18875 PF02525 Flavodoxin-like fold D3093_RS18890 PF00005 ABC transporter D3093_RS18890 PF12848 ABC transporter D3093_RS18900 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS18905 PF01924 Hydrogenase formation hypA family D3093_RS18920 PF04752 ChaC-like protein D3093_RS18930 PF05193 Peptidase M16 inactive domain D3093_RS18930 PF00675 Insulinase (Peptidase family M16) D3093_RS18955 PF00330 Aconitase family (aconitate hydratase) D3093_RS18955 PF11791 Aconitate B N-terminal domain D3093_RS18955 PF06434 Aconitate hydratase 2 N-terminus D3093_RS18975 PF07690 Major Facilitator Superfamily D3093_RS18980 PF00258 Flavodoxin D3093_RS18995 PF03737 Aldolase/RraA D3093_RS19005 PF01865 Protein of unknown function DUF47 D3093_RS19010 PF01384 Phosphate transporter family D3093_RS19020 PF00072 Response regulator receiver domain D3093_RS19020 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS19035 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D3093_RS19045 PF13545 Crp-like helix-turn-helix domain D3093_RS19045 PF00027 Cyclic nucleotide-binding domain D3093_RS19055 PF13426 PAS domain D3093_RS19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19055 PF00072 Response regulator receiver domain D3093_RS19060 PF00072 Response regulator receiver domain D3093_RS19065 PF01370 NAD dependent epimerase/dehydratase family D3093_RS19070 PF02690 Na+/Pi-cotransporter D3093_RS19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS19080 PF03466 LysR substrate binding domain D3093_RS19090 PF00288 GHMP kinases N terminal domain D3093_RS19090 PF08544 GHMP kinases C terminal D3093_RS19095 PF00579 tRNA synthetases class I (W and Y) D3093_RS19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19100 PF00672 HAMP domain D3093_RS19100 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19100 PF01627 Hpt domain D3093_RS19100 PF00072 Response regulator receiver domain D3093_RS19100 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS19120 PF13378 Enolase C-terminal domain-like D3093_RS19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS19125 PF03466 LysR substrate binding domain D3093_RS19130 PF13417 Glutathione S-transferase, N-terminal domain D3093_RS19135 PF12706 Beta-lactamase superfamily domain D3093_RS19180 PF07969 Amidohydrolase family D3093_RS19190 PF00857 Isochorismatase family D3093_RS19195 PF08447 PAS fold D3093_RS19195 PF00989 PAS fold D3093_RS19195 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19195 PF13493 Domain of unknown function (DUF4118) D3093_RS19195 PF13426 PAS domain D3093_RS19200 PF00072 Response regulator receiver domain D3093_RS19200 PF00196 Bacterial regulatory proteins, luxR family D3093_RS19205 PF00561 alpha/beta hydrolase fold D3093_RS19215 PF00563 EAL domain D3093_RS19215 PF03707 Bacterial signalling protein N terminal repeat D3093_RS19215 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS19225 PF07664 Ferrous iron transport protein B C terminus D3093_RS19225 PF02421 Ferrous iron transport protein B D3093_RS19225 PF07670 Nucleoside recognition D3093_RS19245 PF02767 DNA polymerase III beta subunit, central domain D3093_RS19245 PF00712 DNA polymerase III beta subunit, N-terminal domain D3093_RS19245 PF02768 DNA polymerase III beta subunit, C-terminal domain D3093_RS19250 PF02463 RecF/RecN/SMC N terminal domain D3093_RS19255 PF01751 Toprim domain D3093_RS19255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19255 PF00204 DNA gyrase B D3093_RS19255 PF00986 DNA gyrase B subunit, carboxyl terminus D3093_RS19260 PF01381 Helix-turn-helix D3093_RS19270 PF00239 Resolvase, N terminal domain D3093_RS19285 PF01548 Transposase D3093_RS19285 PF02371 Transposase IS116/IS110/IS902 family D3093_RS19300 PF13426 PAS domain D3093_RS19300 PF13581 Histidine kinase-like ATPase domain D3093_RS19300 PF07568 Histidine kinase D3093_RS19335 PF02254 TrkA-N domain D3093_RS19335 PF00999 Sodium/hydrogen exchanger family D3093_RS19345 PF00561 alpha/beta hydrolase fold D3093_RS19345 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D3093_RS19350 PF06055 Exopolysaccharide synthesis, ExoD D3093_RS19425 PF00072 Response regulator receiver domain D3093_RS19425 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19425 PF01627 Hpt domain D3093_RS19430 PF00672 HAMP domain D3093_RS19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19430 PF00072 Response regulator receiver domain D3093_RS19430 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19430 PF01627 Hpt domain D3093_RS19430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS19435 PF00158 Sigma-54 interaction domain D3093_RS19435 PF02954 Bacterial regulatory protein, Fis family D3093_RS19435 PF00072 Response regulator receiver domain D3093_RS19440 PF00486 Transcriptional regulatory protein, C terminal D3093_RS19440 PF00072 Response regulator receiver domain D3093_RS19445 PF00072 Response regulator receiver domain D3093_RS19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19445 PF01627 Hpt domain D3093_RS19445 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS19445 PF00672 HAMP domain D3093_RS19445 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19450 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS19450 PF00072 Response regulator receiver domain D3093_RS19450 PF00563 EAL domain D3093_RS19455 PF01943 Polysaccharide biosynthesis protein D3093_RS19470 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3093_RS19480 PF00331 Glycosyl hydrolase family 10 D3093_RS19490 PF02397 Bacterial sugar transferase D3093_RS19500 PF00535 Glycosyl transferase family 2 D3093_RS19515 PF00535 Glycosyl transferase family 2 D3093_RS19550 PF03552 Cellulose synthase D3093_RS19550 PF07238 PilZ domain D3093_RS19550 PF00535 Glycosyl transferase family 2 D3093_RS19595 PF03411 Penicillin-insensitive murein endopeptidase D3093_RS19600 PF01261 Xylose isomerase-like TIM barrel D3093_RS19605 PF07729 FCD domain D3093_RS19605 PF00392 Bacterial regulatory proteins, gntR family D3093_RS19625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS19640 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS19645 PF00474 Sodium:solute symporter family D3093_RS19715 PF00872 Transposase, Mutator family D3093_RS19745 PF08722 TnsA endonuclease N terminal D3093_RS19745 PF08721 TnsA endonuclease C terminal D3093_RS19750 PF00665 Integrase core domain D3093_RS19755 PF13401 AAA domain D3093_RS19755 PF11426 Tn7 transposition regulator TnsC D3093_RS19820 PF01161 Phosphatidylethanolamine-binding protein D3093_RS19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS19835 PF08448 PAS fold D3093_RS19835 PF13426 PAS domain D3093_RS19835 PF00072 Response regulator receiver domain D3093_RS19835 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS19840 PF00027 Cyclic nucleotide-binding domain D3093_RS19840 PF13545 Crp-like helix-turn-helix domain D3093_RS19845 PF00085 Thioredoxin D3093_RS19860 PF00226 DnaJ domain D3093_RS19860 PF01556 DnaJ C terminal domain D3093_RS19860 PF00684 DnaJ central domain D3093_RS19865 PF17269 Family of unknown function (DUF5335) D3093_RS19885 PF13462 Thioredoxin D3093_RS19885 PF06965 Na+/H+ antiporter 1 D3093_RS19905 PF00296 Luciferase-like monooxygenase D3093_RS19925 PF00011 Hsp20/alpha crystallin family D3093_RS19940 PF07724 AAA domain (Cdc48 subfamily) D3093_RS19940 PF17871 AAA lid domain D3093_RS19940 PF02861 Clp amino terminal domain, pathogenicity island component D3093_RS19940 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS19940 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS19945 PF00012 Hsp70 protein D3093_RS19950 PF00118 TCP-1/cpn60 chaperonin family D3093_RS19955 PF00166 Chaperonin 10 Kd subunit D3093_RS19960 PF01025 GrpE D3093_RS20005 PF03466 LysR substrate binding domain D3093_RS20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20015 PF00196 Bacterial regulatory proteins, luxR family D3093_RS20015 PF00072 Response regulator receiver domain D3093_RS20020 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS20020 PF00107 Zinc-binding dehydrogenase D3093_RS20020 PF13823 Alcohol dehydrogenase GroES-associated D3093_RS20050 PF00206 Lyase D3093_RS20050 PF10397 Adenylosuccinate lyase C-terminus D3093_RS20055 PF02515 CoA-transferase family III D3093_RS20065 PF00375 Sodium:dicarboxylate symporter family D3093_RS20070 PF04303 PrpF protein D3093_RS20075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20075 PF03466 LysR substrate binding domain D3093_RS20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20080 PF03466 LysR substrate binding domain D3093_RS20130 PF01476 LysM domain D3093_RS20130 PF08525 Opacity-associated protein A N-terminal motif D3093_RS20130 PF01551 Peptidase family M23 D3093_RS20140 PF01618 MotA/TolQ/ExbB proton channel family D3093_RS20145 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D3093_RS20145 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D3093_RS20160 PF00072 Response regulator receiver domain D3093_RS20160 PF00486 Transcriptional regulatory protein, C terminal D3093_RS20165 PF00672 HAMP domain D3093_RS20165 PF13756 Stimulus-sensing domain D3093_RS20165 PF13755 Sensor N-terminal transmembrane domain D3093_RS20165 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS20165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS20175 PF07475 HPr Serine kinase C-terminal domain D3093_RS20175 PF02603 HPr Serine kinase N terminus D3093_RS20180 PF03668 P-loop ATPase protein family D3093_RS20185 PF03610 PTS system fructose IIA component D3093_RS20185 PF03830 PTS system sorbose subfamily IIB component D3093_RS20190 PF00381 PTS HPr component phosphorylation site D3093_RS20195 PF00391 PEP-utilising enzyme, mobile domain D3093_RS20195 PF05524 PEP-utilising enzyme, N-terminal D3093_RS20195 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS20200 PF03741 Integral membrane protein TerC family D3093_RS20210 PF07715 TonB-dependent Receptor Plug Domain D3093_RS20210 PF00593 TonB dependent receptor D3093_RS20220 PF01032 FecCD transport family D3093_RS20225 PF00005 ABC transporter D3093_RS20235 PF01548 Transposase D3093_RS20235 PF02371 Transposase IS116/IS110/IS902 family D3093_RS20295 PF02371 Transposase IS116/IS110/IS902 family D3093_RS20295 PF01548 Transposase D3093_RS20300 PF00005 ABC transporter D3093_RS20320 PF00072 Response regulator receiver domain D3093_RS20325 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS20325 PF00072 Response regulator receiver domain D3093_RS20325 PF00672 HAMP domain D3093_RS20325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS20325 PF01627 Hpt domain D3093_RS20340 PF03551 Transcriptional regulator PadR-like family D3093_RS20345 PF01497 Periplasmic binding protein D3093_RS20350 PF01032 FecCD transport family D3093_RS20355 PF01032 FecCD transport family D3093_RS20360 PF00005 ABC transporter D3093_RS20365 PF01070 FMN-dependent dehydrogenase D3093_RS20375 PF18331 PKHD-type hydroxylase C-terminal domain D3093_RS20375 PF13640 2OG-Fe(II) oxygenase superfamily D3093_RS20380 PF07715 TonB-dependent Receptor Plug Domain D3093_RS20380 PF00593 TonB dependent receptor D3093_RS20385 PF03466 LysR substrate binding domain D3093_RS20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20400 PF01569 PAP2 superfamily D3093_RS20405 PF05221 S-adenosyl-L-homocysteine hydrolase D3093_RS20405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D3093_RS20415 PF01430 Hsp33 protein D3093_RS20420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D3093_RS20420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D3093_RS20425 PF00202 Aminotransferase class-III D3093_RS20430 PF01061 ABC-2 type transporter D3093_RS20435 PF02631 RecX family D3093_RS20445 PF00830 Ribosomal L28 family D3093_RS20465 PF00664 ABC transporter transmembrane region D3093_RS20465 PF00005 ABC transporter D3093_RS20470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS20470 PF00672 HAMP domain D3093_RS20485 PF03591 AzlC protein D3093_RS20490 PF03006 Haemolysin-III related D3093_RS20495 PF02861 Clp amino terminal domain, pathogenicity island component D3093_RS20495 PF17871 AAA lid domain D3093_RS20495 PF07724 AAA domain (Cdc48 subfamily) D3093_RS20495 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS20495 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS20500 PF13344 Haloacid dehalogenase-like hydrolase D3093_RS20500 PF00293 NUDIX domain D3093_RS20515 PF17827 PrmC N-terminal domain D3093_RS20515 PF13847 Methyltransferase domain D3093_RS20520 PF01548 Transposase D3093_RS20520 PF02371 Transposase IS116/IS110/IS902 family D3093_RS20525 PF04480 Protein of unknown function (DUF559) D3093_RS20530 PF00472 RF-1 domain D3093_RS20530 PF03462 PCRF domain D3093_RS20535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D3093_RS20535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D3093_RS20535 PF01488 Shikimate / quinate 5-dehydrogenase D3093_RS20540 PF04551 GcpE protein D3093_RS20550 PF01590 GAF domain D3093_RS20550 PF05524 PEP-utilising enzyme, N-terminal D3093_RS20550 PF00391 PEP-utilising enzyme, mobile domain D3093_RS20550 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS20555 PF03060 Nitronate monooxygenase D3093_RS20560 PF00696 Amino acid kinase family D3093_RS20560 PF01842 ACT domain D3093_RS20560 PF13840 ACT domain D3093_RS20570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3093_RS20575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D3093_RS20575 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus D3093_RS20580 PF04963 Sigma-54 factor, core binding domain D3093_RS20580 PF00309 Sigma-54 factor, Activator interacting domain (AID) D3093_RS20580 PF04552 Sigma-54, DNA binding domain D3093_RS20585 PF00005 ABC transporter D3093_RS20600 PF00571 CBS domain D3093_RS20600 PF01380 SIS domain D3093_RS20605 PF00570 HRDC domain D3093_RS20605 PF01612 3'-5' exonuclease D3093_RS20615 PF04321 RmlD substrate binding domain D3093_RS20620 PF07690 Major Facilitator Superfamily D3093_RS20625 PF02673 Bacitracin resistance protein BacA D3093_RS20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS20630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D3093_RS20635 PF01493 GXGXG motif D3093_RS20635 PF01645 Conserved region in glutamate synthase D3093_RS20635 PF00310 Glutamine amidotransferases class-II D3093_RS20635 PF04898 Glutamate synthase central domain D3093_RS20640 PF00583 Acetyltransferase (GNAT) family D3093_RS20640 PF00814 Glycoprotease family D3093_RS20645 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS20645 PF13417 Glutathione S-transferase, N-terminal domain D3093_RS20660 PF02417 Chromate transporter D3093_RS20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS20670 PF00486 Transcriptional regulatory protein, C terminal D3093_RS20670 PF00072 Response regulator receiver domain D3093_RS20695 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS20700 PF00005 ABC transporter D3093_RS20720 PF07687 Peptidase dimerisation domain D3093_RS20720 PF01546 Peptidase family M20/M25/M40 D3093_RS20725 PF01292 Prokaryotic cytochrome b561 D3093_RS20730 PF13247 4Fe-4S dicluster domain D3093_RS20735 PF01568 Molydopterin dinucleotide binding domain D3093_RS20735 PF00384 Molybdopterin oxidoreductase D3093_RS20735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS20770 PF02445 Quinolinate synthetase A protein D3093_RS20775 PF02910 Fumarate reductase flavoprotein C-term D3093_RS20775 PF00890 FAD binding domain D3093_RS20780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D3093_RS20780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D3093_RS20785 PF03275 UDP-galactopyranose mutase D3093_RS20790 PF00478 IMP dehydrogenase / GMP reductase domain D3093_RS20795 PF01546 Peptidase family M20/M25/M40 D3093_RS20795 PF07687 Peptidase dimerisation domain D3093_RS20800 PF07687 Peptidase dimerisation domain D3093_RS20800 PF01546 Peptidase family M20/M25/M40 D3093_RS20805 PF09349 OHCU decarboxylase D3093_RS20805 PF01014 Uricase D3093_RS20810 PF00576 HIUase/Transthyretin family D3093_RS20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20820 PF03466 LysR substrate binding domain D3093_RS20825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3093_RS20825 PF00356 Bacterial regulatory proteins, lacI family D3093_RS20830 PF01541 GIY-YIG catalytic domain D3093_RS20830 PF12826 Helix-hairpin-helix motif D3093_RS20830 PF02151 UvrB/uvrC motif D3093_RS20830 PF08459 UvrC Helix-hairpin-helix N-terminal D3093_RS20875 PF11842 Domain of unknown function (DUF3362) D3093_RS20875 PF04055 Radical SAM superfamily D3093_RS20875 PF08497 Radical SAM N-terminal D3093_RS20885 PF00877 NlpC/P60 family D3093_RS20890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS20890 PF10414 Sirohaem synthase dimerisation region D3093_RS20890 PF14824 Sirohaem biosynthesis protein central D3093_RS20895 PF00384 Molybdopterin oxidoreductase D3093_RS20895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS20895 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS20895 PF01568 Molydopterin dinucleotide binding domain D3093_RS20900 PF00355 Rieske [2Fe-2S] domain D3093_RS20905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D3093_RS20905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3093_RS20905 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS20905 PF18267 Rubredoxin NAD+ reductase C-terminal domain D3093_RS20905 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS20915 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS20920 PF00005 ABC transporter D3093_RS20925 PF03861 ANTAR domain D3093_RS20925 PF08376 Nitrate and nitrite sensing D3093_RS20940 PF01042 Endoribonuclease L-PSP D3093_RS20945 PF03466 LysR substrate binding domain D3093_RS20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS20960 PF17762 HTH domain found in ParB protein D3093_RS20960 PF02195 ParB-like nuclease domain D3093_RS20965 PF13614 AAA domain D3093_RS20980 PF12320 Type 5 capsule protein repressor C-terminal domain D3093_RS20980 PF00149 Calcineurin-like phosphoesterase D3093_RS21020 PF01361 Tautomerase enzyme D3093_RS21025 PF00596 Class II Aldolase and Adducin N-terminal domain D3093_RS21030 PF02954 Bacterial regulatory protein, Fis family D3093_RS21030 PF00072 Response regulator receiver domain D3093_RS21030 PF00158 Sigma-54 interaction domain D3093_RS21035 PF13188 PAS domain D3093_RS21035 PF08448 PAS fold D3093_RS21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS21035 PF00072 Response regulator receiver domain D3093_RS21035 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS21040 PF04216 Protein involved in formate dehydrogenase formation D3093_RS21045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS21045 PF01568 Molydopterin dinucleotide binding domain D3093_RS21045 PF00384 Molybdopterin oxidoreductase D3093_RS21050 PF13247 4Fe-4S dicluster domain D3093_RS21050 PF09163 Formate dehydrogenase N, transmembrane D3093_RS21055 PF01292 Prokaryotic cytochrome b561 D3093_RS21060 PF02634 FdhD/NarQ family D3093_RS21070 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS21075 PF00486 Transcriptional regulatory protein, C terminal D3093_RS21075 PF00072 Response regulator receiver domain D3093_RS21080 PF00072 Response regulator receiver domain D3093_RS21080 PF01339 CheB methylesterase D3093_RS21085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS21085 PF00072 Response regulator receiver domain D3093_RS21085 PF01584 CheW-like domain D3093_RS21085 PF01627 Hpt domain D3093_RS21090 PF00672 HAMP domain D3093_RS21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS21090 PF02203 Tar ligand binding domain homologue D3093_RS21100 PF03705 CheR methyltransferase, all-alpha domain D3093_RS21100 PF01739 CheR methyltransferase, SAM binding domain D3093_RS21110 PF02261 Aspartate decarboxylase D3093_RS21130 PF01209 ubiE/COQ5 methyltransferase family D3093_RS21135 PF03975 CheD chemotactic sensory transduction D3093_RS21140 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D3093_RS21150 PF01648 4'-phosphopantetheinyl transferase superfamily D3093_RS21155 PF01259 SAICAR synthetase D3093_RS21160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS21160 PF01842 ACT domain D3093_RS21160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS21165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3093_RS21170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3093_RS21170 PF00361 Proton-conducting membrane transporter D3093_RS21170 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D3093_RS21170 PF13244 Domain of unknown function (DUF4040) D3093_RS21175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3093_RS21180 PF00361 Proton-conducting membrane transporter D3093_RS21185 PF01899 Na+/H+ ion antiporter subunit D3093_RS21190 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D3093_RS21195 PF03334 Na+/H+ antiporter subunit D3093_RS21220 PF16363 GDP-mannose 4,6 dehydratase D3093_RS21225 PF00664 ABC transporter transmembrane region D3093_RS21225 PF00005 ABC transporter D3093_RS21235 PF00005 ABC transporter D3093_RS21270 PF13458 Periplasmic binding protein D3093_RS21275 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS21280 PF00664 ABC transporter transmembrane region D3093_RS21280 PF00005 ABC transporter D3093_RS21280 PF03412 Peptidase C39 family D3093_RS21295 PF17912 MalK OB fold domain D3093_RS21295 PF00005 ABC transporter D3093_RS21300 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21305 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21315 PF00171 Aldehyde dehydrogenase family D3093_RS21325 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS21335 PF02515 CoA-transferase family III D3093_RS21340 PF00106 short chain dehydrogenase D3093_RS21345 PF00356 Bacterial regulatory proteins, lacI family D3093_RS21350 PF07715 TonB-dependent Receptor Plug Domain D3093_RS21350 PF00593 TonB dependent receptor D3093_RS21375 PF02554 Carbon starvation protein CstA D3093_RS21375 PF13722 5TM C-terminal transporter carbon starvation CstA D3093_RS21380 PF04328 Selenoprotein, putative D3093_RS21390 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS21390 PF13823 Alcohol dehydrogenase GroES-associated D3093_RS21390 PF00107 Zinc-binding dehydrogenase D3093_RS21395 PF00106 short chain dehydrogenase D3093_RS21405 PF07729 FCD domain D3093_RS21405 PF00392 Bacterial regulatory proteins, gntR family D3093_RS21415 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21420 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21425 PF00005 ABC transporter D3093_RS21450 PF02540 NAD synthase D3093_RS21450 PF00795 Carbon-nitrogen hydrolase D3093_RS21455 PF00672 HAMP domain D3093_RS21455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS21460 PF02423 Ornithine cyclodeaminase/mu-crystallin family D3093_RS21465 PF07859 alpha/beta hydrolase fold D3093_RS21470 PF00005 ABC transporter D3093_RS21480 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21495 PF07690 Major Facilitator Superfamily D3093_RS21500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS21500 PF03466 LysR substrate binding domain D3093_RS21505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS21510 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21550 PF16998 17 kDa outer membrane surface antigen D3093_RS21550 PF05433 Glycine zipper 2TM domain D3093_RS21560 PF01679 Proteolipid membrane potential modulator D3093_RS21565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS21565 PF08269 Cache domain D3093_RS21585 PF01475 Ferric uptake regulator family D3093_RS21595 PF04102 SlyX D3093_RS21605 PF03707 Bacterial signalling protein N terminal repeat D3093_RS21605 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS21605 PF00563 EAL domain D3093_RS21615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS21615 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS21620 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS21620 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS21625 PF01799 [2Fe-2S] binding domain D3093_RS21625 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS21630 PF03466 LysR substrate binding domain D3093_RS21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS21640 PF02515 CoA-transferase family III D3093_RS21650 PF03328 HpcH/HpaI aldolase/citrate lyase family D3093_RS21655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS21655 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS21655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS21695 PF13439 Glycosyltransferase Family 4 D3093_RS21695 PF00534 Glycosyl transferases group 1 D3093_RS21700 PF00535 Glycosyl transferase family 2 D3093_RS21715 PF04055 Radical SAM superfamily D3093_RS21730 PF00994 Probable molybdopterin binding domain D3093_RS21735 PF01464 Transglycosylase SLT domain D3093_RS21740 PF03167 Uracil DNA glycosylase superfamily D3093_RS21765 PF13545 Crp-like helix-turn-helix domain D3093_RS21765 PF00027 Cyclic nucleotide-binding domain D3093_RS21790 PF00753 Metallo-beta-lactamase superfamily D3093_RS21795 PF02082 Transcriptional regulator D3093_RS21815 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21820 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS21825 PF00005 ABC transporter D3093_RS21825 PF17850 CysA C-terminal regulatory domain D3093_RS21825 PF12857 TOBE-like domain D3093_RS21840 PF02254 TrkA-N domain D3093_RS21840 PF00999 Sodium/hydrogen exchanger family D3093_RS21840 PF02080 TrkA-C domain D3093_RS21845 PF00486 Transcriptional regulatory protein, C terminal D3093_RS21845 PF00072 Response regulator receiver domain D3093_RS21870 PF02540 NAD synthase D3093_RS21875 PF13537 Glutamine amidotransferase domain D3093_RS21875 PF00733 Asparagine synthase D3093_RS21880 PF00501 AMP-binding enzyme D3093_RS21880 PF13193 AMP-binding enzyme C-terminal domain D3093_RS21900 PF00534 Glycosyl transferases group 1 D3093_RS21900 PF00862 Sucrose synthase D3093_RS21905 PF13439 Glycosyltransferase Family 4 D3093_RS21905 PF00534 Glycosyl transferases group 1 D3093_RS21910 PF00535 Glycosyl transferase family 2 D3093_RS21920 PF02397 Bacterial sugar transferase D3093_RS21930 PF00553 Cellulose binding domain D3093_RS21930 PF00150 Cellulase (glycosyl hydrolase family 5) D3093_RS21940 PF00331 Glycosyl hydrolase family 10 D3093_RS21945 PF13807 G-rich domain on putative tyrosine kinase D3093_RS21945 PF02706 Chain length determinant protein D3093_RS21945 PF13614 AAA domain D3093_RS21950 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3093_RS21960 PF17191 RecG wedge domain D3093_RS21960 PF00271 Helicase conserved C-terminal domain D3093_RS21960 PF00270 DEAD/DEAH box helicase D3093_RS21965 PF00300 Histidine phosphatase superfamily (branch 1) D3093_RS21985 PF00128 Alpha amylase, catalytic domain D3093_RS21985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D3093_RS21990 PF00672 HAMP domain D3093_RS21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS21990 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS21990 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB D3093_RS21990 PF08448 PAS fold D3093_RS22000 PF05433 Glycine zipper 2TM domain D3093_RS22000 PF16998 17 kDa outer membrane surface antigen D3093_RS22010 PF01634 ATP phosphoribosyltransferase D3093_RS22015 PF00815 Histidinol dehydrogenase D3093_RS22020 PF06793 Uncharacterised protein family (UPF0262) D3093_RS22025 PF01451 Low molecular weight phosphotyrosine protein phosphatase D3093_RS22030 PF00072 Response regulator receiver domain D3093_RS22030 PF01627 Hpt domain D3093_RS22030 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS22030 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS22030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS22030 PF00672 HAMP domain D3093_RS22040 PF01176 Translation initiation factor 1A / IF-1 D3093_RS22045 PF02545 Maf-like protein D3093_RS22050 PF00575 S1 RNA binding domain D3093_RS22050 PF10150 Ribonuclease E/G family D3093_RS22055 PF03884 DNA gyrase inhibitor YacG D3093_RS22085 PF13614 AAA domain D3093_RS22090 PF13404 AsnC-type helix-turn-helix domain D3093_RS22090 PF01037 Lrp/AsnC ligand binding domain D3093_RS22095 PF00491 Arginase family D3093_RS22100 PF00202 Aminotransferase class-III D3093_RS22120 PF00440 Bacterial regulatory proteins, tetR family D3093_RS22135 PF07237 Protein of unknown function (DUF1428) D3093_RS22145 PF00202 Aminotransferase class-III D3093_RS22150 PF00171 Aldehyde dehydrogenase family D3093_RS22155 PF07883 Cupin domain D3093_RS22155 PF01381 Helix-turn-helix D3093_RS22160 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS22170 PF13416 Bacterial extracellular solute-binding protein D3093_RS22175 PF08402 TOBE domain D3093_RS22175 PF00005 ABC transporter D3093_RS22180 PF03466 LysR substrate binding domain D3093_RS22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS22185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS22185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS22185 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS22190 PF02515 CoA-transferase family III D3093_RS22220 PF03600 Citrate transporter D3093_RS22220 PF02080 TrkA-C domain D3093_RS22225 PF00248 Aldo/keto reductase family D3093_RS22230 PF07690 Major Facilitator Superfamily D3093_RS22235 PF03466 LysR substrate binding domain D3093_RS22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS22245 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS22245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS22250 PF04632 Fusaric acid resistance protein family D3093_RS22255 PF07869 Protein of unknown function (DUF1656) D3093_RS22290 PF16998 17 kDa outer membrane surface antigen D3093_RS22290 PF05433 Glycine zipper 2TM domain D3093_RS22295 PF00501 AMP-binding enzyme D3093_RS22295 PF13193 AMP-binding enzyme C-terminal domain D3093_RS22300 PF01925 Sulfite exporter TauE/SafE D3093_RS22305 PF00005 ABC transporter D3093_RS22310 PF13411 MerR HTH family regulatory protein D3093_RS22315 PF02627 Carboxymuconolactone decarboxylase family D3093_RS22325 PF03458 UPF0126 domain D3093_RS22330 PF17954 Quercetinase C-terminal cupin domain D3093_RS22330 PF02678 Pirin D3093_RS22355 PF00403 Heavy-metal-associated domain D3093_RS22360 PF09278 MerR, DNA binding D3093_RS22360 PF00376 MerR family regulatory protein D3093_RS22390 PF13249 Squalene-hopene cyclase N-terminal domain D3093_RS22390 PF13243 Squalene-hopene cyclase C-terminal domain D3093_RS22415 PF00072 Response regulator receiver domain D3093_RS22425 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS22425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS22425 PF13493 Domain of unknown function (DUF4118) D3093_RS22425 PF02702 Osmosensitive K+ channel His kinase sensor domain D3093_RS22425 PF13492 GAF domain D3093_RS22435 PF01595 Cyclin M transmembrane N-terminal domain D3093_RS22435 PF03471 Transporter associated domain D3093_RS22435 PF00571 CBS domain D3093_RS22440 PF01098 Cell cycle protein D3093_RS22460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D3093_RS22460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D3093_RS22470 PF14698 Argininosuccinate lyase C-terminal D3093_RS22470 PF00206 Lyase D3093_RS22475 PF08534 Redoxin D3093_RS22485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3093_RS22485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3093_RS22490 PF00766 Electron transfer flavoprotein FAD-binding domain D3093_RS22490 PF01012 Electron transfer flavoprotein domain D3093_RS22495 PF01012 Electron transfer flavoprotein domain D3093_RS22500 PF01923 Cobalamin adenosyltransferase D3093_RS22510 PF00232 Glycosyl hydrolase family 1 D3093_RS22560 PF02653 Branched-chain amino acid transport system / permease component D3093_RS22570 PF00005 ABC transporter D3093_RS22575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS22575 PF00672 HAMP domain D3093_RS22580 PF03739 Lipopolysaccharide export system permease LptF/LptG D3093_RS22605 PF00460 Flagella basal body rod protein D3093_RS22605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS22605 PF00460 Flagella basal body rod protein D3093_RS22605 PF07559 Flagellar basal body protein FlaE D3093_RS22605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS22605 PF07559 Flagellar basal body protein FlaE D3093_RS22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS22625 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS22630 PF00149 Calcineurin-like phosphoesterase D3093_RS22630 PF02872 5'-nucleotidase, C-terminal domain D3093_RS22635 PF00155 Aminotransferase class I and II D3093_RS22635 PF00392 Bacterial regulatory proteins, gntR family D3093_RS22640 PF02627 Carboxymuconolactone decarboxylase family D3093_RS22645 PF00440 Bacterial regulatory proteins, tetR family D3093_RS22655 PF00881 Nitroreductase family D3093_RS22660 PF07685 CobB/CobQ-like glutamine amidotransferase domain D3093_RS22660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3093_RS22665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS22670 PF01888 CbiD D3093_RS22675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS22685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS22690 PF02571 Precorrin-6x reductase CbiJ/CobK D3093_RS22695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS22700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D3093_RS22705 PF02570 Precorrin-8X methylmutase D3093_RS22710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D3093_RS22715 PF02514 CobN/Magnesium Chelatase D3093_RS22720 PF02492 CobW/HypB/UreG, nucleotide-binding domain D3093_RS22720 PF07683 Cobalamin synthesis protein cobW C-terminal domain D3093_RS22725 PF00005 ABC transporter D3093_RS22725 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS22730 PF00005 ABC transporter D3093_RS22740 PF02653 Branched-chain amino acid transport system / permease component D3093_RS22750 PF13193 AMP-binding enzyme C-terminal domain D3093_RS22750 PF00501 AMP-binding enzyme D3093_RS22755 PF00106 short chain dehydrogenase D3093_RS22760 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS22760 PF00043 Glutathione S-transferase, C-terminal domain D3093_RS22780 PF00128 Alpha amylase, catalytic domain D3093_RS22785 PF02446 4-alpha-glucanotransferase D3093_RS22805 PF01266 FAD dependent oxidoreductase D3093_RS22815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS22815 PF00672 HAMP domain D3093_RS22815 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS22820 PF00072 Response regulator receiver domain D3093_RS22820 PF00486 Transcriptional regulatory protein, C terminal D3093_RS22825 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS22825 PF00072 Response regulator receiver domain D3093_RS22825 PF01627 Hpt domain D3093_RS22825 PF00672 HAMP domain D3093_RS22825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS22830 PF00313 'Cold-shock' DNA-binding domain D3093_RS22840 PF12802 MarR family D3093_RS22845 PF01063 Amino-transferase class IV D3093_RS22850 PF17757 UvrB interaction domain D3093_RS22850 PF12344 Ultra-violet resistance protein B D3093_RS22850 PF02151 UvrB/uvrC motif D3093_RS22850 PF00271 Helicase conserved C-terminal domain D3093_RS22850 PF04851 Type III restriction enzyme, res subunit D3093_RS22920 PF02706 Chain length determinant protein D3093_RS22920 PF13807 G-rich domain on putative tyrosine kinase D3093_RS22920 PF13614 AAA domain D3093_RS22925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3093_RS22925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS22935 PF13579 Glycosyl transferase 4-like domain D3093_RS22935 PF00534 Glycosyl transferases group 1 D3093_RS22950 PF03466 LysR substrate binding domain D3093_RS22950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS22955 PF07687 Peptidase dimerisation domain D3093_RS22955 PF01546 Peptidase family M20/M25/M40 D3093_RS22960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS22965 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS22970 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS22970 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS22975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS22975 PF00005 ABC transporter D3093_RS22985 PF01546 Peptidase family M20/M25/M40 D3093_RS22985 PF07687 Peptidase dimerisation domain D3093_RS22990 PF00850 Histone deacetylase domain D3093_RS22995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS22995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS23000 PF05853 beta-keto acid cleavage enzyme D3093_RS23015 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS23020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS23030 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain D3093_RS23030 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain D3093_RS23035 PF07005 Sugar-binding N-terminal domain D3093_RS23035 PF17042 Nucleotide-binding C-terminal domain D3093_RS23040 PF00325 Bacterial regulatory proteins, crp family D3093_RS23040 PF00027 Cyclic nucleotide-binding domain D3093_RS23045 PF02954 Bacterial regulatory protein, Fis family D3093_RS23045 PF00158 Sigma-54 interaction domain D3093_RS23045 PF00072 Response regulator receiver domain D3093_RS23055 PF00216 Bacterial DNA-binding protein D3093_RS23060 PF04542 Sigma-70 region 2 D3093_RS23060 PF08281 Sigma-70, region 4 D3093_RS23070 PF01027 Inhibitor of apoptosis-promoting Bax1 D3093_RS23080 PF07690 Major Facilitator Superfamily D3093_RS23090 PF06796 Periplasmic nitrate reductase protein NapE D3093_RS23095 PF12838 4Fe-4S dicluster domain D3093_RS23095 PF13187 4Fe-4S dicluster domain D3093_RS23105 PF01568 Molydopterin dinucleotide binding domain D3093_RS23105 PF00384 Molybdopterin oxidoreductase D3093_RS23105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS23110 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D3093_RS23115 PF03264 NapC/NirT cytochrome c family, N-terminal region D3093_RS23120 PF00216 Bacterial DNA-binding protein D3093_RS23130 PF00072 Response regulator receiver domain D3093_RS23135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS23135 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS23145 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D3093_RS23150 PF00510 Cytochrome c oxidase subunit III D3093_RS23155 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3093_RS23160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3093_RS23160 PF06481 COX Aromatic Rich Motif D3093_RS23165 PF00083 Sugar (and other) transporter D3093_RS23165 PF07690 Major Facilitator Superfamily D3093_RS23180 PF01256 Carbohydrate kinase D3093_RS23185 PF00300 Histidine phosphatase superfamily (branch 1) D3093_RS23185 PF13456 Reverse transcriptase-like D3093_RS23195 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS23195 PF00563 EAL domain D3093_RS23195 PF03707 Bacterial signalling protein N terminal repeat D3093_RS23200 PF02028 BCCT, betaine/carnitine/choline family transporter D3093_RS23210 PF03706 Lysylphosphatidylglycerol synthase TM region D3093_RS23215 PF02386 Cation transport protein D3093_RS23245 PF03466 LysR substrate binding domain D3093_RS23245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS23250 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D3093_RS23255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS23255 PF00384 Molybdopterin oxidoreductase D3093_RS23255 PF01568 Molydopterin dinucleotide binding domain D3093_RS23260 PF13247 4Fe-4S dicluster domain D3093_RS23260 PF12800 4Fe-4S binding domain D3093_RS23265 PF00037 4Fe-4S binding domain D3093_RS23265 PF12798 4Fe-4S binding domain D3093_RS23270 PF00361 Proton-conducting membrane transporter D3093_RS23275 PF00146 NADH dehydrogenase D3093_RS23280 PF00361 Proton-conducting membrane transporter D3093_RS23280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3093_RS23285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D3093_RS23290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D3093_RS23290 PF00361 Proton-conducting membrane transporter D3093_RS23295 PF00374 Nickel-dependent hydrogenase D3093_RS23295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D3093_RS23295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D3093_RS23300 PF12838 4Fe-4S dicluster domain D3093_RS23305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D3093_RS23310 PF07450 Formate hydrogenlyase maturation protein HycH D3093_RS23315 PF01750 Hydrogenase maturation protease D3093_RS23320 PF01226 Formate/nitrite transporter D3093_RS23325 PF02634 FdhD/NarQ family D3093_RS23330 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D3093_RS23335 PF01455 HupF/HypC family D3093_RS23340 PF04955 HupE / UreJ protein D3093_RS23365 PF01168 Alanine racemase, N-terminal domain D3093_RS23365 PF00842 Alanine racemase, C-terminal domain D3093_RS23385 PF00672 HAMP domain D3093_RS23385 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS23385 PF02743 Cache domain D3093_RS23390 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS23410 PF01047 MarR family D3093_RS23415 PF02566 OsmC-like protein D3093_RS23430 PF00072 Response regulator receiver domain D3093_RS23435 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS23435 PF00672 HAMP domain D3093_RS23435 PF17149 Periplasmic sensor domain found in signal transduction proteins D3093_RS23435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS23435 PF01627 Hpt domain D3093_RS23435 PF00072 Response regulator receiver domain D3093_RS23440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3093_RS23445 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS23450 PF00571 CBS domain D3093_RS23450 PF00005 ABC transporter D3093_RS23455 PF01432 Peptidase family M3 D3093_RS23460 PF05962 HutD D3093_RS23485 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS23490 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS23495 PF00005 ABC transporter D3093_RS23510 PF00384 Molybdopterin oxidoreductase D3093_RS23510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS23510 PF01568 Molydopterin dinucleotide binding domain D3093_RS23515 PF03916 Polysulphide reductase, NrfD D3093_RS23520 PF13247 4Fe-4S dicluster domain D3093_RS23530 PF03466 LysR substrate binding domain D3093_RS23530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS23535 PF00248 Aldo/keto reductase family D3093_RS23540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS23540 PF00672 HAMP domain D3093_RS23545 PF06472 ABC transporter transmembrane region 2 D3093_RS23545 PF00005 ABC transporter D3093_RS23555 PF17762 HTH domain found in ParB protein D3093_RS23555 PF02195 ParB-like nuclease domain D3093_RS23560 PF13614 AAA domain D3093_RS23565 PF01435 Peptidase family M48 D3093_RS23570 PF01566 Natural resistance-associated macrophage protein D3093_RS23570 PF03358 NADPH-dependent FMN reductase D3093_RS23585 PF01261 Xylose isomerase-like TIM barrel D3093_RS23595 PF00535 Glycosyl transferase family 2 D3093_RS23610 PF04932 O-Antigen ligase D3093_RS23615 PF13807 G-rich domain on putative tyrosine kinase D3093_RS23615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D3093_RS23615 PF02706 Chain length determinant protein D3093_RS23620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3093_RS23620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3093_RS23620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3093_RS23645 PF00535 Glycosyl transferase family 2 D3093_RS23655 PF01037 Lrp/AsnC ligand binding domain D3093_RS23660 PF14748 Pyrroline-5-carboxylate reductase dimerisation D3093_RS23660 PF03807 NADP oxidoreductase coenzyme F420-dependent D3093_RS23665 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D3093_RS23665 PF14850 DNA-binding domain of Proline dehydrogenase D3093_RS23665 PF01619 Proline dehydrogenase D3093_RS23665 PF00171 Aldehyde dehydrogenase family D3093_RS23705 PF04542 Sigma-70 region 2 D3093_RS23705 PF08281 Sigma-70, region 4 D3093_RS23715 PF01022 Bacterial regulatory protein, arsR family D3093_RS23720 PF00581 Rhodanese-like domain D3093_RS23725 PF00873 AcrB/AcrD/AcrF family D3093_RS23740 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS23740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS23745 PF00196 Bacterial regulatory proteins, luxR family D3093_RS23745 PF00072 Response regulator receiver domain D3093_RS23750 PF00085 Thioredoxin D3093_RS23765 PF00425 chorismate binding enzyme D3093_RS23765 PF04715 Anthranilate synthase component I, N terminal region D3093_RS23770 PF01063 Amino-transferase class IV D3093_RS23780 PF02163 Peptidase family M50 D3093_RS23780 PF00571 CBS domain D3093_RS23795 PF01037 Lrp/AsnC ligand binding domain D3093_RS23800 PF03466 LysR substrate binding domain D3093_RS23800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS23805 PF07690 Major Facilitator Superfamily D3093_RS23810 PF07729 FCD domain D3093_RS23810 PF00392 Bacterial regulatory proteins, gntR family D3093_RS23815 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS23820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS23820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS23825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS23825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS23830 PF05661 Protein of unknown function (DUF808) D3093_RS23850 PF01966 HD domain D3093_RS23855 PF00005 ABC transporter D3093_RS23860 PF01061 ABC-2 type transporter D3093_RS23865 PF04828 Glutathione-dependent formaldehyde-activating enzyme D3093_RS23870 PF01425 Amidase D3093_RS23875 PF01425 Amidase D3093_RS23880 PF00857 Isochorismatase family D3093_RS23885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS23890 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS23895 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS23895 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS23900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS23900 PF00005 ABC transporter D3093_RS23905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS23905 PF00005 ABC transporter D3093_RS23910 PF00857 Isochorismatase family D3093_RS23915 PF05145 Transition state regulatory protein AbrB D3093_RS23920 PF00392 Bacterial regulatory proteins, gntR family D3093_RS23920 PF07729 FCD domain D3093_RS23930 PF03814 Potassium-transporting ATPase A subunit D3093_RS23940 PF02669 K+-transporting ATPase, c chain D3093_RS23945 PF13493 Domain of unknown function (DUF4118) D3093_RS23945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS23945 PF13492 GAF domain D3093_RS23945 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS23945 PF02702 Osmosensitive K+ channel His kinase sensor domain D3093_RS23950 PF00072 Response regulator receiver domain D3093_RS23950 PF00486 Transcriptional regulatory protein, C terminal D3093_RS23955 PF03741 Integral membrane protein TerC family D3093_RS23960 PF00211 Adenylate and Guanylate cyclase catalytic domain D3093_RS23965 PF13545 Crp-like helix-turn-helix domain D3093_RS23965 PF00027 Cyclic nucleotide-binding domain D3093_RS23970 PF04264 YceI-like domain D3093_RS23985 PF00881 Nitroreductase family D3093_RS23990 PF00072 Response regulator receiver domain D3093_RS23990 PF00196 Bacterial regulatory proteins, luxR family D3093_RS23995 PF00072 Response regulator receiver domain D3093_RS23995 PF00196 Bacterial regulatory proteins, luxR family D3093_RS24000 PF00989 PAS fold D3093_RS24000 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS24000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS24010 PF02321 Outer membrane efflux protein D3093_RS24015 PF00873 AcrB/AcrD/AcrF family D3093_RS24020 PF00873 AcrB/AcrD/AcrF family D3093_RS24025 PF13533 Biotin-lipoyl like D3093_RS24030 PF00155 Aminotransferase class I and II D3093_RS24035 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D3093_RS24035 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D3093_RS24045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS24045 PF08269 Cache domain D3093_RS24050 PF13193 AMP-binding enzyme C-terminal domain D3093_RS24050 PF00501 AMP-binding enzyme D3093_RS24055 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24060 PF08402 TOBE domain D3093_RS24060 PF00005 ABC transporter D3093_RS24070 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS24130 PF00593 TonB dependent receptor D3093_RS24130 PF07715 TonB-dependent Receptor Plug Domain D3093_RS24140 PF12833 Helix-turn-helix domain D3093_RS24140 PF02311 AraC-like ligand binding domain D3093_RS24150 PF00593 TonB dependent receptor D3093_RS24150 PF07715 TonB-dependent Receptor Plug Domain D3093_RS24165 PF02310 B12 binding domain D3093_RS24165 PF01642 Methylmalonyl-CoA mutase D3093_RS24170 PF01642 Methylmalonyl-CoA mutase D3093_RS24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS24180 PF03466 LysR substrate binding domain D3093_RS24185 PF01717 Cobalamin-independent synthase, Catalytic domain D3093_RS24185 PF08267 Cobalamin-independent synthase, N-terminal domain D3093_RS24190 PF06114 IrrE N-terminal-like domain D3093_RS24190 PF01381 Helix-turn-helix D3093_RS24190 PF09856 Predicted transcriptional regulator (DUF2083) D3093_RS24200 PF03477 ATP cone domain D3093_RS24200 PF02867 Ribonucleotide reductase, barrel domain D3093_RS24200 PF00317 Ribonucleotide reductase, all-alpha domain D3093_RS24210 PF00285 Citrate synthase, C-terminal domain D3093_RS24215 PF00694 Aconitase C-terminal domain D3093_RS24215 PF00330 Aconitase family (aconitate hydratase) D3093_RS24220 PF04303 PrpF protein D3093_RS24240 PF07690 Major Facilitator Superfamily D3093_RS24285 PF00437 Type II/IV secretion system protein D3093_RS24290 PF01883 Iron-sulfur cluster assembly protein D3093_RS24290 PF10609 NUBPL iron-transfer P-loop NTPase D3093_RS24300 PF04972 BON domain D3093_RS24300 PF00263 Bacterial type II and III secretion system protein D3093_RS24300 PF13629 Pilus formation protein N terminal region D3093_RS24325 PF05247 Flagellar transcriptional activator (FlhD) D3093_RS24330 PF01548 Transposase D3093_RS24330 PF02371 Transposase IS116/IS110/IS902 family D3093_RS24340 PF00072 Response regulator receiver domain D3093_RS24340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS24340 PF09456 RcsC Alpha-Beta-Loop (ABL) D3093_RS24340 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS24345 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH D3093_RS24350 PF02254 TrkA-N domain D3093_RS24350 PF07885 Ion channel D3093_RS24355 PF02559 CarD-like/TRCF domain D3093_RS24355 PF17757 UvrB interaction domain D3093_RS24355 PF03461 TRCF domain D3093_RS24355 PF00271 Helicase conserved C-terminal domain D3093_RS24355 PF00270 DEAD/DEAH box helicase D3093_RS24370 PF00072 Response regulator receiver domain D3093_RS24370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS24370 PF13426 PAS domain D3093_RS24375 PF00465 Iron-containing alcohol dehydrogenase D3093_RS24380 PF00171 Aldehyde dehydrogenase family D3093_RS24385 PF00005 ABC transporter D3093_RS24390 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS24390 PF00005 ABC transporter D3093_RS24395 PF02653 Branched-chain amino acid transport system / permease component D3093_RS24400 PF13458 Periplasmic binding protein D3093_RS24415 PF03466 LysR substrate binding domain D3093_RS24415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS24420 PF01970 Tripartite tricarboxylate transporter TctA family D3093_RS24440 PF00701 Dihydrodipicolinate synthetase family D3093_RS24445 PF09339 IclR helix-turn-helix domain D3093_RS24445 PF01614 Bacterial transcriptional regulator D3093_RS24450 PF02734 DAK2 domain D3093_RS24450 PF02733 Dak1 domain D3093_RS24465 PF00873 AcrB/AcrD/AcrF family D3093_RS24470 PF13533 Biotin-lipoyl like D3093_RS24495 PF00701 Dihydrodipicolinate synthetase family D3093_RS24500 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24505 PF08402 TOBE domain D3093_RS24505 PF00005 ABC transporter D3093_RS24515 PF01565 FAD binding domain D3093_RS24515 PF02913 FAD linked oxidases, C-terminal domain D3093_RS24520 PF00440 Bacterial regulatory proteins, tetR family D3093_RS24530 PF00166 Chaperonin 10 Kd subunit D3093_RS24535 PF00118 TCP-1/cpn60 chaperonin family D3093_RS24540 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS24540 PF06426 Serine acetyltransferase, N-terminal D3093_RS24545 PF00266 Aminotransferase class-V D3093_RS24555 PF01381 Helix-turn-helix D3093_RS24555 PF07883 Cupin domain D3093_RS24560 PF00676 Dehydrogenase E1 component D3093_RS24565 PF02780 Transketolase, C-terminal domain D3093_RS24565 PF02779 Transketolase, pyrimidine binding domain D3093_RS24570 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS24580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS24580 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS24585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS24595 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24600 PF00005 ABC transporter D3093_RS24605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS24610 PF01970 Tripartite tricarboxylate transporter TctA family D3093_RS24625 PF03737 Aldolase/RraA D3093_RS24630 PF03401 Tripartite tricarboxylate transporter family receptor D3093_RS24640 PF03737 Aldolase/RraA D3093_RS24645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3093_RS24645 PF13378 Enolase C-terminal domain-like D3093_RS24650 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24655 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24655 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS24660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS24660 PF00005 ABC transporter D3093_RS24665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS24665 PF00005 ABC transporter D3093_RS24670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS24675 PF02558 Ketopantoate reductase PanE/ApbA D3093_RS24675 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3093_RS24680 PF03737 Aldolase/RraA D3093_RS24685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS24690 PF01425 Amidase D3093_RS24695 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24700 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS24700 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS24705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS24705 PF00005 ABC transporter D3093_RS24710 PF00005 ABC transporter D3093_RS24710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS24715 PF00892 EamA-like transporter family D3093_RS24720 PF01276 Orn/Lys/Arg decarboxylase, major domain D3093_RS24720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D3093_RS24725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS24725 PF03466 LysR substrate binding domain D3093_RS24730 PF00857 Isochorismatase family D3093_RS24740 PF07883 Cupin domain D3093_RS24740 PF01381 Helix-turn-helix D3093_RS24745 PF00501 AMP-binding enzyme D3093_RS24745 PF13193 AMP-binding enzyme C-terminal domain D3093_RS24750 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS24750 PF00107 Zinc-binding dehydrogenase D3093_RS24755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS24755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS24765 PF00171 Aldehyde dehydrogenase family D3093_RS24770 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS24775 PF07729 FCD domain D3093_RS24775 PF00392 Bacterial regulatory proteins, gntR family D3093_RS24785 PF11806 Domain of unknown function (DUF3327) D3093_RS24785 PF00756 Putative esterase D3093_RS24790 PF00975 Thioesterase domain D3093_RS24790 PF00501 AMP-binding enzyme D3093_RS24790 PF00668 Condensation domain D3093_RS24790 PF13193 AMP-binding enzyme C-terminal domain D3093_RS24790 PF00550 Phosphopantetheine attachment site D3093_RS24805 PF00857 Isochorismatase family D3093_RS24805 PF00550 Phosphopantetheine attachment site D3093_RS24810 PF13193 AMP-binding enzyme C-terminal domain D3093_RS24810 PF00501 AMP-binding enzyme D3093_RS24815 PF00425 chorismate binding enzyme D3093_RS24820 PF00873 AcrB/AcrD/AcrF family D3093_RS24830 PF05977 Transmembrane secretion effector D3093_RS24835 PF07715 TonB-dependent Receptor Plug Domain D3093_RS24835 PF00593 TonB dependent receptor D3093_RS24860 PF10503 Esterase PHB depolymerase D3093_RS24870 PF03929 PepSY-associated TM region D3093_RS24875 PF07715 TonB-dependent Receptor Plug Domain D3093_RS24875 PF00593 TonB dependent receptor D3093_RS24890 PF01595 Cyclin M transmembrane N-terminal domain D3093_RS24890 PF03471 Transporter associated domain D3093_RS24890 PF00571 CBS domain D3093_RS24905 PF00486 Transcriptional regulatory protein, C terminal D3093_RS24905 PF00072 Response regulator receiver domain D3093_RS24910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS24910 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS24920 PF09335 SNARE associated Golgi protein D3093_RS24925 PF00561 alpha/beta hydrolase fold D3093_RS24935 PF01205 Uncharacterized protein family UPF0029 D3093_RS24940 PF07729 FCD domain D3093_RS24940 PF00392 Bacterial regulatory proteins, gntR family D3093_RS24945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS24950 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS24955 PF13378 Enolase C-terminal domain-like D3093_RS24955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D3093_RS24960 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS24965 PF01381 Helix-turn-helix D3093_RS24965 PF07883 Cupin domain D3093_RS24970 PF01546 Peptidase family M20/M25/M40 D3093_RS24970 PF07687 Peptidase dimerisation domain D3093_RS24985 PF00005 ABC transporter D3093_RS24990 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS25010 PF02371 Transposase IS116/IS110/IS902 family D3093_RS25010 PF01548 Transposase D3093_RS25020 PF01548 Transposase D3093_RS25020 PF02371 Transposase IS116/IS110/IS902 family D3093_RS25025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D3093_RS25025 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS25075 PF08714 Formaldehyde-activating enzyme (Fae) D3093_RS25085 PF18030 RimK PreATP-grasp domain D3093_RS25085 PF08443 RimK-like ATP-grasp domain D3093_RS25090 PF02289 Cyclohydrolase (MCH) D3093_RS25095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3093_RS25095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D3093_RS25095 PF02142 MGS-like domain D3093_RS25100 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal D3093_RS25110 PF01329 Pterin 4 alpha carbinolamine dehydratase D3093_RS25120 PF07969 Amidohydrolase family D3093_RS25125 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase D3093_RS25125 PF02741 FTR, proximal lobe D3093_RS25145 PF00005 ABC transporter D3093_RS25165 PF04476 4-HFC-P synthase D3093_RS25205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS25210 PF13360 PQQ-like domain D3093_RS25230 PF03167 Uracil DNA glycosylase superfamily D3093_RS25265 PF03466 LysR substrate binding domain D3093_RS25265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS25270 PF02515 CoA-transferase family III D3093_RS25300 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS25305 PF00005 ABC transporter D3093_RS25305 PF08402 TOBE domain D3093_RS25310 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS25335 PF02566 OsmC-like protein D3093_RS25340 PF00550 Phosphopantetheine attachment site D3093_RS25345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS25345 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS25345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS25420 PF00924 Mechanosensitive ion channel D3093_RS25440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS25440 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS25455 PF02589 LUD domain D3093_RS25460 PF02589 LUD domain D3093_RS25460 PF11870 Domain of unknown function (DUF3390) D3093_RS25460 PF13183 4Fe-4S dicluster domain D3093_RS25465 PF02754 Cysteine-rich domain D3093_RS25470 PF02913 FAD linked oxidases, C-terminal domain D3093_RS25470 PF01565 FAD binding domain D3093_RS25475 PF02652 L-lactate permease D3093_RS25480 PF07729 FCD domain D3093_RS25480 PF00392 Bacterial regulatory proteins, gntR family D3093_RS25490 PF13649 Methyltransferase domain D3093_RS25495 PF17871 AAA lid domain D3093_RS25495 PF07724 AAA domain (Cdc48 subfamily) D3093_RS25495 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS25495 PF02861 Clp amino terminal domain, pathogenicity island component D3093_RS25495 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS25500 PF09339 IclR helix-turn-helix domain D3093_RS25500 PF01614 Bacterial transcriptional regulator D3093_RS25505 PF05035 2-keto-3-deoxy-galactonokinase D3093_RS25510 PF01081 KDPG and KHG aldolase D3093_RS25515 PF03401 Tripartite tricarboxylate transporter family receptor D3093_RS25550 PF00072 Response regulator receiver domain D3093_RS25555 PF00072 Response regulator receiver domain D3093_RS25560 PF00072 Response regulator receiver domain D3093_RS25560 PF01627 Hpt domain D3093_RS25560 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS25560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS25560 PF00672 HAMP domain D3093_RS25560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D3093_RS25565 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS25570 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS25575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS25575 PF13426 PAS domain D3093_RS25575 PF08447 PAS fold D3093_RS25595 PF08269 Cache domain D3093_RS25595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS25610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3093_RS25610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3093_RS25615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS25615 PF00989 PAS fold D3093_RS25615 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS25620 PF00196 Bacterial regulatory proteins, luxR family D3093_RS25620 PF00072 Response regulator receiver domain D3093_RS25625 PF03544 Gram-negative bacterial TonB protein C-terminal D3093_RS25630 PF02472 Biopolymer transport protein ExbD/TolR D3093_RS25635 PF01618 MotA/TolQ/ExbB proton channel family D3093_RS25660 PF05036 Sporulation related domain D3093_RS25660 PF03330 Lytic transglycolase D3093_RS25670 PF06580 Histidine kinase D3093_RS25670 PF07694 5TMR of 5TMR-LYT D3093_RS25675 PF04397 LytTr DNA-binding domain D3093_RS25675 PF00072 Response regulator receiver domain D3093_RS25680 PF02554 Carbon starvation protein CstA D3093_RS25680 PF13722 5TM C-terminal transporter carbon starvation CstA D3093_RS25690 PF05343 M42 glutamyl aminopeptidase D3093_RS25695 PF04262 Glutamate-cysteine ligase D3093_RS25695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D3093_RS25695 PF18419 ATP-grasp-like domain D3093_RS25700 PF13537 Glutamine amidotransferase domain D3093_RS25700 PF00733 Asparagine synthase D3093_RS25705 PF00392 Bacterial regulatory proteins, gntR family D3093_RS25705 PF00155 Aminotransferase class I and II D3093_RS25725 PF03466 LysR substrate binding domain D3093_RS25725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS25730 PF00202 Aminotransferase class-III D3093_RS25735 PF00171 Aldehyde dehydrogenase family D3093_RS25740 PF07729 FCD domain D3093_RS25740 PF00392 Bacterial regulatory proteins, gntR family D3093_RS25745 PF01743 Poly A polymerase head domain D3093_RS25745 PF00571 CBS domain D3093_RS25755 PF03741 Integral membrane protein TerC family D3093_RS25760 PF01970 Tripartite tricarboxylate transporter TctA family D3093_RS25810 PF00534 Glycosyl transferases group 1 D3093_RS25810 PF13439 Glycosyltransferase Family 4 D3093_RS25825 PF08241 Methyltransferase domain D3093_RS25845 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS25845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS25850 PF00664 ABC transporter transmembrane region D3093_RS25850 PF00005 ABC transporter D3093_RS25860 PF16363 GDP-mannose 4,6 dehydratase D3093_RS25865 PF12802 MarR family D3093_RS25875 PF00440 Bacterial regulatory proteins, tetR family D3093_RS25875 PF08361 MAATS-type transcriptional repressor, C-terminal region D3093_RS25880 PF00501 AMP-binding enzyme D3093_RS25880 PF13193 AMP-binding enzyme C-terminal domain D3093_RS25885 PF00392 Bacterial regulatory proteins, gntR family D3093_RS25885 PF07729 FCD domain D3093_RS25890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS25890 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS25890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS25895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS25895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS25900 PF00501 AMP-binding enzyme D3093_RS25900 PF13193 AMP-binding enzyme C-terminal domain D3093_RS25905 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS25905 PF00005 ABC transporter D3093_RS25910 PF00501 AMP-binding enzyme D3093_RS25915 PF02653 Branched-chain amino acid transport system / permease component D3093_RS25930 PF00005 ABC transporter D3093_RS25935 PF13193 AMP-binding enzyme C-terminal domain D3093_RS25935 PF00501 AMP-binding enzyme D3093_RS25940 PF00171 Aldehyde dehydrogenase family D3093_RS25945 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS25945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS25945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS25950 PF02803 Thiolase, C-terminal domain D3093_RS25950 PF00108 Thiolase, N-terminal domain D3093_RS25955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS25955 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS25955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS25960 PF01039 Carboxyl transferase domain D3093_RS25965 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS25970 PF02785 Biotin carboxylase C-terminal domain D3093_RS25970 PF18140 Propionyl-coenzyme A carboxylase BT domain D3093_RS25970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D3093_RS25970 PF00289 Biotin carboxylase, N-terminal domain D3093_RS25970 PF00364 Biotin-requiring enzyme D3093_RS25975 PF00682 HMGL-like D3093_RS25990 PF00106 short chain dehydrogenase D3093_RS26010 PF01596 O-methyltransferase D3093_RS26015 PF07859 alpha/beta hydrolase fold D3093_RS26025 PF01522 Polysaccharide deacetylase D3093_RS26030 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS26035 PF00232 Glycosyl hydrolase family 1 D3093_RS26040 PF00232 Glycosyl hydrolase family 1 D3093_RS26045 PF06463 Molybdenum Cofactor Synthesis C D3093_RS26045 PF04055 Radical SAM superfamily D3093_RS26055 PF06472 ABC transporter transmembrane region 2 D3093_RS26055 PF00005 ABC transporter D3093_RS26065 PF00535 Glycosyl transferase family 2 D3093_RS26065 PF01501 Glycosyl transferase family 8 D3093_RS26080 PF00232 Glycosyl hydrolase family 1 D3093_RS26085 PF02056 Family 4 glycosyl hydrolase D3093_RS26085 PF11975 Family 4 glycosyl hydrolase C-terminal domain D3093_RS26110 PF01546 Peptidase family M20/M25/M40 D3093_RS26110 PF07687 Peptidase dimerisation domain D3093_RS26120 PF12282 Signal transduction histidine kinase D3093_RS26120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26120 PF07568 Histidine kinase D3093_RS26125 PF00072 Response regulator receiver domain D3093_RS26125 PF00196 Bacterial regulatory proteins, luxR family D3093_RS26135 PF01627 Hpt domain D3093_RS26135 PF01584 CheW-like domain D3093_RS26135 PF02895 Signal transducing histidine kinase, homodimeric domain D3093_RS26135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26135 PF07194 P2 response regulator binding domain D3093_RS26140 PF00072 Response regulator receiver domain D3093_RS26140 PF01627 Hpt domain D3093_RS26140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26140 PF01584 CheW-like domain D3093_RS26145 PF03705 CheR methyltransferase, all-alpha domain D3093_RS26145 PF01739 CheR methyltransferase, SAM binding domain D3093_RS26150 PF03130 PBS lyase HEAT-like repeat D3093_RS26155 PF00072 Response regulator receiver domain D3093_RS26155 PF01339 CheB methylesterase D3093_RS26160 PF01584 CheW-like domain D3093_RS26165 PF00672 HAMP domain D3093_RS26165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26175 PF00072 Response regulator receiver domain D3093_RS26180 PF01914 MarC family integral membrane protein D3093_RS26190 PF00285 Citrate synthase, C-terminal domain D3093_RS26210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D3093_RS26210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D3093_RS26225 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26230 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26235 PF17912 MalK OB fold domain D3093_RS26235 PF00005 ABC transporter D3093_RS26240 PF00005 ABC transporter D3093_RS26240 PF08402 TOBE domain D3093_RS26245 PF01266 FAD dependent oxidoreductase D3093_RS26245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D3093_RS26250 PF09335 SNARE associated Golgi protein D3093_RS26260 PF00550 Phosphopantetheine attachment site D3093_RS26260 PF07993 Male sterility protein D3093_RS26260 PF00668 Condensation domain D3093_RS26260 PF13193 AMP-binding enzyme C-terminal domain D3093_RS26260 PF00501 AMP-binding enzyme D3093_RS26270 PF00005 ABC transporter D3093_RS26275 PF00664 ABC transporter transmembrane region D3093_RS26275 PF00005 ABC transporter D3093_RS26280 PF00975 Thioesterase domain D3093_RS26300 PF00672 HAMP domain D3093_RS26300 PF02203 Tar ligand binding domain homologue D3093_RS26300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26305 PF00672 HAMP domain D3093_RS26305 PF17202 Single cache domain 3 D3093_RS26320 PF00034 Cytochrome c D3093_RS26335 PF00072 Response regulator receiver domain D3093_RS26335 PF00196 Bacterial regulatory proteins, luxR family D3093_RS26340 PF00072 Response regulator receiver domain D3093_RS26340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26340 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS26340 PF09308 LuxQ, periplasmic D3093_RS26345 PF00072 Response regulator receiver domain D3093_RS26345 PF13426 PAS domain D3093_RS26345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26360 PF14542 GCN5-related N-acetyl-transferase D3093_RS26365 PF00128 Alpha amylase, catalytic domain D3093_RS26395 PF17202 Single cache domain 3 D3093_RS26395 PF00672 HAMP domain D3093_RS26395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26400 PF02659 Putative manganese efflux pump D3093_RS26430 PF01596 O-methyltransferase D3093_RS26435 PF01553 Acyltransferase D3093_RS26435 PF00501 AMP-binding enzyme D3093_RS26440 PF00440 Bacterial regulatory proteins, tetR family D3093_RS26440 PF17932 Tetracyclin repressor-like, C-terminal domain D3093_RS26445 PF01546 Peptidase family M20/M25/M40 D3093_RS26445 PF07687 Peptidase dimerisation domain D3093_RS26450 PF01266 FAD dependent oxidoreductase D3093_RS26465 PF02653 Branched-chain amino acid transport system / permease component D3093_RS26470 PF02653 Branched-chain amino acid transport system / permease component D3093_RS26470 PF11862 Domain of unknown function (DUF3382) D3093_RS26475 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS26475 PF00005 ABC transporter D3093_RS26480 PF00005 ABC transporter D3093_RS26490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26490 PF08447 PAS fold D3093_RS26490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS26490 PF08447 PAS fold D3093_RS26500 PF03358 NADPH-dependent FMN reductase D3093_RS26510 PF00455 DeoR C terminal sensor domain D3093_RS26510 PF08220 DeoR-like helix-turn-helix domain D3093_RS26515 PF17912 MalK OB fold domain D3093_RS26515 PF00005 ABC transporter D3093_RS26520 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26525 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26530 PF01547 Bacterial extracellular solute-binding protein D3093_RS26535 PF08241 Methyltransferase domain D3093_RS26540 PF13614 AAA domain D3093_RS26545 PF17762 HTH domain found in ParB protein D3093_RS26545 PF02195 ParB-like nuclease domain D3093_RS26565 PF00106 short chain dehydrogenase D3093_RS26575 PF01757 Acyltransferase family D3093_RS26585 PF01380 SIS domain D3093_RS26600 PF10672 S-adenosylmethionine-dependent methyltransferase D3093_RS26600 PF02926 THUMP domain D3093_RS26600 PF01170 Putative RNA methylase family UPF0020 D3093_RS26605 PF01568 Molydopterin dinucleotide binding domain D3093_RS26605 PF00384 Molybdopterin oxidoreductase D3093_RS26605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS26620 PF00392 Bacterial regulatory proteins, gntR family D3093_RS26620 PF07729 FCD domain D3093_RS26630 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26635 PF00005 ABC transporter D3093_RS26640 PF01979 Amidohydrolase family D3093_RS26650 PF01979 Amidohydrolase family D3093_RS26650 PF00449 Urease alpha-subunit, N-terminal domain D3093_RS26655 PF01425 Amidase D3093_RS26680 PF08402 TOBE domain D3093_RS26680 PF00005 ABC transporter D3093_RS26685 PF13416 Bacterial extracellular solute-binding protein D3093_RS26690 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26695 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS26700 PF00576 HIUase/Transthyretin family D3093_RS26710 PF01425 Amidase D3093_RS26715 PF09308 LuxQ, periplasmic D3093_RS26715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS26715 PF00072 Response regulator receiver domain D3093_RS26715 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS26730 PF01209 ubiE/COQ5 methyltransferase family D3093_RS26745 PF17770 Ribonuclease J C-terminal domain D3093_RS26745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D3093_RS26745 PF12706 Beta-lactamase superfamily domain D3093_RS26755 PF00723 Glycosyl hydrolases family 15 D3093_RS26765 PF00196 Bacterial regulatory proteins, luxR family D3093_RS26765 PF00072 Response regulator receiver domain D3093_RS26770 PF00196 Bacterial regulatory proteins, luxR family D3093_RS26770 PF00072 Response regulator receiver domain D3093_RS26775 PF00196 Bacterial regulatory proteins, luxR family D3093_RS26775 PF00072 Response regulator receiver domain D3093_RS26785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3093_RS26785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3093_RS26785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3093_RS26790 PF16363 GDP-mannose 4,6 dehydratase D3093_RS26795 PF16363 GDP-mannose 4,6 dehydratase D3093_RS26800 PF00534 Glycosyl transferases group 1 D3093_RS26800 PF13439 Glycosyltransferase Family 4 D3093_RS26805 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3093_RS26815 PF02397 Bacterial sugar transferase D3093_RS26820 PF01370 NAD dependent epimerase/dehydratase family D3093_RS26825 PF13614 AAA domain D3093_RS26825 PF13807 G-rich domain on putative tyrosine kinase D3093_RS26825 PF02706 Chain length determinant protein D3093_RS26830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3093_RS26830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS26840 PF16363 GDP-mannose 4,6 dehydratase D3093_RS26955 PF06074 Protein of unknown function (DUF935) D3093_RS26975 PF10124 Mu-like prophage major head subunit gpT D3093_RS27050 PF00113 Enolase, C-terminal TIM barrel domain D3093_RS27050 PF03952 Enolase, N-terminal domain D3093_RS27055 PF01515 Phosphate acetyl/butaryl transferase D3093_RS27060 PF00871 Acetokinase family D3093_RS27075 PF04962 KduI/IolB family D3093_RS27080 PF07729 FCD domain D3093_RS27080 PF00392 Bacterial regulatory proteins, gntR family D3093_RS27085 PF03812 2-keto-3-deoxygluconate permease D3093_RS27095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D3093_RS27095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D3093_RS27100 PF00924 Mechanosensitive ion channel D3093_RS27140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D3093_RS27140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D3093_RS27170 PF05233 PHB accumulation regulatory domain D3093_RS27170 PF07879 PHB/PHA accumulation regulator DNA-binding domain D3093_RS27175 PF08241 Methyltransferase domain D3093_RS27175 PF12697 Alpha/beta hydrolase family D3093_RS27180 PF00108 Thiolase, N-terminal domain D3093_RS27180 PF02803 Thiolase, C-terminal domain D3093_RS27195 PF07690 Major Facilitator Superfamily D3093_RS27200 PF03466 LysR substrate binding domain D3093_RS27200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS27210 PF03707 Bacterial signalling protein N terminal repeat D3093_RS27210 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS27210 PF00563 EAL domain D3093_RS27210 PF13188 PAS domain D3093_RS27215 PF06071 Protein of unknown function (DUF933) D3093_RS27215 PF01926 50S ribosome-binding GTPase D3093_RS27235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS27235 PF01627 Hpt domain D3093_RS27235 PF00989 PAS fold D3093_RS27235 PF00072 Response regulator receiver domain D3093_RS27235 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS27235 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS27240 PF00072 Response regulator receiver domain D3093_RS27240 PF01339 CheB methylesterase D3093_RS27245 PF00072 Response regulator receiver domain D3093_RS27245 PF01339 CheB methylesterase D3093_RS27250 PF08448 PAS fold D3093_RS27250 PF03705 CheR methyltransferase, all-alpha domain D3093_RS27250 PF01739 CheR methyltransferase, SAM binding domain D3093_RS27250 PF01339 CheB methylesterase D3093_RS27255 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D3093_RS27255 PF00476 DNA polymerase family A D3093_RS27255 PF01367 5'-3' exonuclease, C-terminal SAM fold D3093_RS27255 PF01612 3'-5' exonuclease D3093_RS27275 PF01590 GAF domain D3093_RS27275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS27275 PF08446 PAS fold D3093_RS27275 PF00360 Phytochrome region D3093_RS27275 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS27280 PF00486 Transcriptional regulatory protein, C terminal D3093_RS27280 PF00072 Response regulator receiver domain D3093_RS27285 PF00072 Response regulator receiver domain D3093_RS27285 PF00486 Transcriptional regulatory protein, C terminal D3093_RS27320 PF00005 ABC transporter D3093_RS27330 PF00563 EAL domain D3093_RS27330 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS27330 PF03707 Bacterial signalling protein N terminal repeat D3093_RS27340 PF03180 NLPA lipoprotein D3093_RS27345 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27350 PF00005 ABC transporter D3093_RS27350 PF09383 NIL domain D3093_RS27355 PF13193 AMP-binding enzyme C-terminal domain D3093_RS27355 PF00501 AMP-binding enzyme D3093_RS27360 PF03180 NLPA lipoprotein D3093_RS27370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D3093_RS27375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D3093_RS27375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D3093_RS27375 PF00034 Cytochrome c D3093_RS27380 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3093_RS27395 PF00708 Acylphosphatase D3093_RS27405 PF03099 Biotin/lipoate A/B protein ligase family D3093_RS27420 PF03448 MgtE intracellular N domain D3093_RS27420 PF01769 Divalent cation transporter D3093_RS27420 PF00571 CBS domain D3093_RS27425 PF01266 FAD dependent oxidoreductase D3093_RS27425 PF05690 Thiazole biosynthesis protein ThiG D3093_RS27435 PF05690 Thiazole biosynthesis protein ThiG D3093_RS27470 PF00072 Response regulator receiver domain D3093_RS27470 PF00486 Transcriptional regulatory protein, C terminal D3093_RS27475 PF01323 DSBA-like thioredoxin domain D3093_RS27485 PF13746 4Fe-4S dicluster domain D3093_RS27485 PF12801 4Fe-4S binding domain D3093_RS27485 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3093_RS27490 PF00155 Aminotransferase class I and II D3093_RS27490 PF00392 Bacterial regulatory proteins, gntR family D3093_RS27495 PF00311 Phosphoenolpyruvate carboxylase D3093_RS27505 PF01116 Fructose-bisphosphate aldolase class-II D3093_RS27520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D3093_RS27520 PF12801 4Fe-4S binding domain D3093_RS27520 PF13746 4Fe-4S dicluster domain D3093_RS27525 PF01548 Transposase D3093_RS27525 PF02371 Transposase IS116/IS110/IS902 family D3093_RS27535 PF08446 PAS fold D3093_RS27535 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS27535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS27535 PF00360 Phytochrome region D3093_RS27535 PF01590 GAF domain D3093_RS27540 PF00072 Response regulator receiver domain D3093_RS27545 PF08448 PAS fold D3093_RS27545 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS27545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS27545 PF00072 Response regulator receiver domain D3093_RS27545 PF13188 PAS domain D3093_RS27550 PF00391 PEP-utilising enzyme, mobile domain D3093_RS27550 PF05524 PEP-utilising enzyme, N-terminal D3093_RS27550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3093_RS27550 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS27550 PF00381 PTS HPr component phosphorylation site D3093_RS27555 PF00294 pfkB family carbohydrate kinase D3093_RS27560 PF02378 Phosphotransferase system, EIIC D3093_RS27560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3093_RS27565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS27565 PF08447 PAS fold D3093_RS27565 PF08448 PAS fold D3093_RS27575 PF07715 TonB-dependent Receptor Plug Domain D3093_RS27575 PF00593 TonB dependent receptor D3093_RS27585 PF08281 Sigma-70, region 4 D3093_RS27585 PF04542 Sigma-70 region 2 D3093_RS27590 PF00912 Transglycosylase D3093_RS27595 PF06426 Serine acetyltransferase, N-terminal D3093_RS27595 PF00132 Bacterial transferase hexapeptide (six repeats) D3093_RS27610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS27610 PF03466 LysR substrate binding domain D3093_RS27620 PF08402 TOBE domain D3093_RS27620 PF00005 ABC transporter D3093_RS27625 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27630 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27635 PF00491 Arginase family D3093_RS27640 PF00795 Carbon-nitrogen hydrolase D3093_RS27645 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS27645 PF13291 ACT domain D3093_RS27650 PF00860 Permease family D3093_RS27655 PF00171 Aldehyde dehydrogenase family D3093_RS27660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS27665 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27670 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS27670 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS27675 PF00005 ABC transporter D3093_RS27680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS27680 PF00005 ABC transporter D3093_RS27685 PF07687 Peptidase dimerisation domain D3093_RS27685 PF01546 Peptidase family M20/M25/M40 D3093_RS27705 PF02608 ABC transporter substrate-binding protein PnrA-like D3093_RS27735 PF00483 Nucleotidyl transferase D3093_RS27740 PF01556 DnaJ C terminal domain D3093_RS27740 PF00684 DnaJ central domain D3093_RS27740 PF00226 DnaJ domain D3093_RS27750 PF00849 RNA pseudouridylate synthase D3093_RS27765 PF00155 Aminotransferase class I and II D3093_RS27775 PF13649 Methyltransferase domain D3093_RS27780 PF00202 Aminotransferase class-III D3093_RS27785 PF04055 Radical SAM superfamily D3093_RS27785 PF06968 Biotin and Thiamin Synthesis associated domain D3093_RS27795 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS27795 PF00391 PEP-utilising enzyme, mobile domain D3093_RS27795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D3093_RS27810 PF03975 CheD chemotactic sensory transduction D3093_RS27815 PF00313 'Cold-shock' DNA-binding domain D3093_RS27820 PF13193 AMP-binding enzyme C-terminal domain D3093_RS27820 PF00501 AMP-binding enzyme D3093_RS27825 PF01370 NAD dependent epimerase/dehydratase family D3093_RS27830 PF01790 Prolipoprotein diacylglyceryl transferase D3093_RS27840 PF02578 Multi-copper polyphenol oxidoreductase laccase D3093_RS27850 PF14572 Phosphoribosyl synthetase-associated domain D3093_RS27850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D3093_RS27855 PF14693 Ribosomal protein TL5, C-terminal domain D3093_RS27855 PF01386 Ribosomal L25p family D3093_RS27860 PF01195 Peptidyl-tRNA hydrolase D3093_RS27865 PF02653 Branched-chain amino acid transport system / permease component D3093_RS27870 PF02653 Branched-chain amino acid transport system / permease component D3093_RS27875 PF00005 ABC transporter D3093_RS27880 PF13407 Periplasmic binding protein domain D3093_RS27885 PF00171 Aldehyde dehydrogenase family D3093_RS27890 PF00701 Dihydrodipicolinate synthetase family D3093_RS27900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS27900 PF03466 LysR substrate binding domain D3093_RS27905 PF13407 Periplasmic binding protein domain D3093_RS27910 PF00005 ABC transporter D3093_RS27915 PF02653 Branched-chain amino acid transport system / permease component D3093_RS27920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS27925 PF00920 Dehydratase family D3093_RS27935 PF01263 Aldose 1-epimerase D3093_RS27940 PF01232 Mannitol dehydrogenase Rossmann domain D3093_RS27940 PF08125 Mannitol dehydrogenase C-terminal domain D3093_RS27950 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS27960 PF04230 Polysaccharide pyruvyl transferase D3093_RS27965 PF07732 Multicopper oxidase D3093_RS27965 PF00394 Multicopper oxidase D3093_RS27965 PF07731 Multicopper oxidase D3093_RS27975 PF08362 YcdC-like protein, C-terminal region D3093_RS27975 PF00440 Bacterial regulatory proteins, tetR family D3093_RS27980 PF13533 Biotin-lipoyl like D3093_RS27985 PF00873 AcrB/AcrD/AcrF family D3093_RS27990 PF05368 NmrA-like family D3093_RS27995 PF01638 HxlR-like helix-turn-helix D3093_RS28000 PF06628 Catalase-related immune-responsive D3093_RS28000 PF00199 Catalase D3093_RS28005 PF03466 LysR substrate binding domain D3093_RS28005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS28010 PF00588 SpoU rRNA Methylase family D3093_RS28020 PF07995 Glucose / Sorbosone dehydrogenase D3093_RS28055 PF03786 D-mannonate dehydratase (UxuA) D3093_RS28060 PF08125 Mannitol dehydrogenase C-terminal domain D3093_RS28060 PF01232 Mannitol dehydrogenase Rossmann domain D3093_RS28075 PF00392 Bacterial regulatory proteins, gntR family D3093_RS28075 PF07729 FCD domain D3093_RS28085 PF07883 Cupin domain D3093_RS28090 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS28100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS28105 PF00248 Aldo/keto reductase family D3093_RS28110 PF00392 Bacterial regulatory proteins, gntR family D3093_RS28110 PF07729 FCD domain D3093_RS28115 PF02142 MGS-like domain D3093_RS28120 PF02614 Glucuronate isomerase D3093_RS28125 PF08666 SAF domain D3093_RS28125 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3093_RS28130 PF03466 LysR substrate binding domain D3093_RS28130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS28155 PF01970 Tripartite tricarboxylate transporter TctA family D3093_RS28160 PF03741 Integral membrane protein TerC family D3093_RS28170 PF00072 Response regulator receiver domain D3093_RS28170 PF00486 Transcriptional regulatory protein, C terminal D3093_RS28175 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS28175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS28200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS28205 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS28210 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS28210 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS28215 PF01758 Sodium Bile acid symporter family D3093_RS28220 PF03960 ArsC family D3093_RS28230 PF00392 Bacterial regulatory proteins, gntR family D3093_RS28230 PF07702 UTRA domain D3093_RS28235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS28245 PF01425 Amidase D3093_RS28255 PF07729 FCD domain D3093_RS28255 PF00392 Bacterial regulatory proteins, gntR family D3093_RS28260 PF02515 CoA-transferase family III D3093_RS28265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS28265 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS28265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS28270 PF03972 MmgE/PrpD family D3093_RS28280 PF03328 HpcH/HpaI aldolase/citrate lyase family D3093_RS28290 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS28310 PF08281 Sigma-70, region 4 D3093_RS28310 PF04542 Sigma-70 region 2 D3093_RS28325 PF00023 Ankyrin repeat D3093_RS28325 PF12796 Ankyrin repeats (3 copies) D3093_RS28330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS28330 PF03466 LysR substrate binding domain D3093_RS28340 PF00753 Metallo-beta-lactamase superfamily D3093_RS28350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3093_RS28360 PF05199 GMC oxidoreductase D3093_RS28360 PF00732 GMC oxidoreductase D3093_RS28375 PF03275 UDP-galactopyranose mutase D3093_RS28385 PF00005 ABC transporter D3093_RS28385 PF00664 ABC transporter transmembrane region D3093_RS28390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS28390 PF13426 PAS domain D3093_RS28390 PF00072 Response regulator receiver domain D3093_RS28395 PF00860 Permease family D3093_RS28400 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS28400 PF13185 GAF domain D3093_RS28410 PF02615 Malate/L-lactate dehydrogenase D3093_RS28415 PF01425 Amidase D3093_RS28450 PF03150 Di-haem cytochrome c peroxidase D3093_RS28475 PF00263 Bacterial type II and III secretion system protein D3093_RS28475 PF13629 Pilus formation protein N terminal region D3093_RS28475 PF04972 BON domain D3093_RS28490 PF00437 Type II/IV secretion system protein D3093_RS28605 PF00150 Cellulase (glycosyl hydrolase family 5) D3093_RS28620 PF00925 GTP cyclohydrolase II D3093_RS28640 PF00005 ABC transporter D3093_RS28650 PF02653 Branched-chain amino acid transport system / permease component D3093_RS28655 PF02653 Branched-chain amino acid transport system / permease component D3093_RS28660 PF07969 Amidohydrolase family D3093_RS28665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS28665 PF00672 HAMP domain D3093_RS28675 PF00989 PAS fold D3093_RS28675 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS28675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS28680 PF02515 CoA-transferase family III D3093_RS28690 PF00376 MerR family regulatory protein D3093_RS28690 PF09278 MerR, DNA binding D3093_RS28700 PF01614 Bacterial transcriptional regulator D3093_RS28700 PF09339 IclR helix-turn-helix domain D3093_RS28705 PF12838 4Fe-4S dicluster domain D3093_RS28705 PF00384 Molybdopterin oxidoreductase D3093_RS28705 PF01568 Molydopterin dinucleotide binding domain D3093_RS28705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS28705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D3093_RS28710 PF10531 SLBB domain D3093_RS28710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D3093_RS28710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D3093_RS28715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS28715 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS28715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS28720 PF00392 Bacterial regulatory proteins, gntR family D3093_RS28720 PF07729 FCD domain D3093_RS28725 PF02142 MGS-like domain D3093_RS28725 PF00781 Diacylglycerol kinase catalytic domain D3093_RS28730 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS28735 PF01594 AI-2E family transporter D3093_RS28740 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) D3093_RS28745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D3093_RS28745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D3093_RS28760 PF13847 Methyltransferase domain D3093_RS28760 PF03551 Transcriptional regulator PadR-like family D3093_RS28770 PF00486 Transcriptional regulatory protein, C terminal D3093_RS28770 PF00072 Response regulator receiver domain D3093_RS28775 PF01548 Transposase D3093_RS28775 PF02371 Transposase IS116/IS110/IS902 family D3093_RS28785 PF01706 FliG C-terminal domain D3093_RS28785 PF14841 FliG middle domain D3093_RS28785 PF14842 FliG N-terminal domain D3093_RS28795 PF00813 FliP family D3093_RS28800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3093_RS28810 PF01514 Secretory protein of YscJ/FliF family D3093_RS28810 PF08345 Flagellar M-ring protein C-terminal D3093_RS28820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D3093_RS28820 PF02154 Flagellar motor switch protein FliM D3093_RS28845 PF03264 NapC/NirT cytochrome c family, N-terminal region D3093_RS28850 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D3093_RS28855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D3093_RS28855 PF01568 Molydopterin dinucleotide binding domain D3093_RS28855 PF00384 Molybdopterin oxidoreductase D3093_RS28875 PF02107 Flagellar L-ring protein D3093_RS28880 PF13144 Chaperone for flagella basal body P-ring formation D3093_RS28885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS28885 PF00460 Flagella basal body rod protein D3093_RS28890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS28890 PF00460 Flagella basal body rod protein D3093_RS28900 PF01618 MotA/TolQ/ExbB proton channel family D3093_RS28905 PF00691 OmpA family D3093_RS28905 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3093_RS28910 PF07690 Major Facilitator Superfamily D3093_RS28975 PF02954 Bacterial regulatory protein, Fis family D3093_RS28975 PF00158 Sigma-54 interaction domain D3093_RS28975 PF00072 Response regulator receiver domain D3093_RS28980 PF00465 Iron-containing alcohol dehydrogenase D3093_RS28980 PF00171 Aldehyde dehydrogenase family D3093_RS28995 PF00300 Histidine phosphatase superfamily (branch 1) D3093_RS29000 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS29005 PF00005 ABC transporter D3093_RS29005 PF08402 TOBE domain D3093_RS29010 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS29020 PF02080 TrkA-C domain D3093_RS29020 PF06826 Predicted Permease Membrane Region D3093_RS29025 PF00155 Aminotransferase class I and II D3093_RS29030 PF00158 Sigma-54 interaction domain D3093_RS29030 PF02954 Bacterial regulatory protein, Fis family D3093_RS29030 PF00072 Response regulator receiver domain D3093_RS29035 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS29035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS29045 PF13188 PAS domain D3093_RS29045 PF03707 Bacterial signalling protein N terminal repeat D3093_RS29045 PF00990 Diguanylate cyclase, GGDEF domain D3093_RS29045 PF00563 EAL domain D3093_RS29050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29050 PF03466 LysR substrate binding domain D3093_RS29055 PF01799 [2Fe-2S] binding domain D3093_RS29055 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS29060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS29070 PF01037 Lrp/AsnC ligand binding domain D3093_RS29080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS29080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS29080 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS29085 PF00970 Oxidoreductase FAD-binding domain D3093_RS29085 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS29090 PF00989 PAS fold D3093_RS29090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS29090 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS29100 PF07043 Protein of unknown function (DUF1328) D3093_RS29105 PF03572 Peptidase family S41 D3093_RS29105 PF13180 PDZ domain D3093_RS29110 PF03466 LysR substrate binding domain D3093_RS29110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29125 PF03466 LysR substrate binding domain D3093_RS29125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS29130 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS29130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS29135 PF00171 Aldehyde dehydrogenase family D3093_RS29160 PF00072 Response regulator receiver domain D3093_RS29160 PF13426 PAS domain D3093_RS29160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS29165 PF06745 KaiC D3093_RS29175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS29175 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS29175 PF00989 PAS fold D3093_RS29195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29195 PF03466 LysR substrate binding domain D3093_RS29200 PF03601 Conserved hypothetical protein 698 D3093_RS29215 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS29235 PF13614 AAA domain D3093_RS29240 PF02195 ParB-like nuclease domain D3093_RS29240 PF17762 HTH domain found in ParB protein D3093_RS29245 PF02371 Transposase IS116/IS110/IS902 family D3093_RS29245 PF01548 Transposase D3093_RS29250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS29250 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS29250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS29265 PF12800 4Fe-4S binding domain D3093_RS29265 PF13247 4Fe-4S dicluster domain D3093_RS29275 PF02629 CoA binding domain D3093_RS29275 PF00549 CoA-ligase D3093_RS29280 PF08442 ATP-grasp domain D3093_RS29280 PF00549 CoA-ligase D3093_RS29285 PF00171 Aldehyde dehydrogenase family D3093_RS29305 PF01515 Phosphate acetyl/butaryl transferase D3093_RS29310 PF01614 Bacterial transcriptional regulator D3093_RS29310 PF09339 IclR helix-turn-helix domain D3093_RS29315 PF09339 IclR helix-turn-helix domain D3093_RS29315 PF01614 Bacterial transcriptional regulator D3093_RS29325 PF01037 Lrp/AsnC ligand binding domain D3093_RS29330 PF01042 Endoribonuclease L-PSP D3093_RS29335 PF00291 Pyridoxal-phosphate dependent enzyme D3093_RS29350 PF02653 Branched-chain amino acid transport system / permease component D3093_RS29355 PF11862 Domain of unknown function (DUF3382) D3093_RS29355 PF02653 Branched-chain amino acid transport system / permease component D3093_RS29360 PF00005 ABC transporter D3093_RS29360 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS29365 PF00005 ABC transporter D3093_RS29375 PF01546 Peptidase family M20/M25/M40 D3093_RS29375 PF07687 Peptidase dimerisation domain D3093_RS29380 PF01266 FAD dependent oxidoreductase D3093_RS29385 PF07690 Major Facilitator Superfamily D3093_RS29390 PF00144 Beta-lactamase D3093_RS29395 PF03466 LysR substrate binding domain D3093_RS29395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29425 PF00072 Response regulator receiver domain D3093_RS29425 PF00196 Bacterial regulatory proteins, luxR family D3093_RS29430 PF13581 Histidine kinase-like ATPase domain D3093_RS29430 PF13426 PAS domain D3093_RS29430 PF07568 Histidine kinase D3093_RS29440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D3093_RS29445 PF00294 pfkB family carbohydrate kinase D3093_RS29450 PF05524 PEP-utilising enzyme, N-terminal D3093_RS29450 PF00391 PEP-utilising enzyme, mobile domain D3093_RS29450 PF02896 PEP-utilising enzyme, TIM barrel domain D3093_RS29450 PF00381 PTS HPr component phosphorylation site D3093_RS29450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D3093_RS29455 PF00356 Bacterial regulatory proteins, lacI family D3093_RS29465 PF00857 Isochorismatase family D3093_RS29475 PF00561 alpha/beta hydrolase fold D3093_RS29480 PF17645 Arylmalonate decarboxylase D3093_RS29485 PF01494 FAD binding domain D3093_RS29490 PF00005 ABC transporter D3093_RS29495 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS29495 PF00005 ABC transporter D3093_RS29500 PF11862 Domain of unknown function (DUF3382) D3093_RS29500 PF02653 Branched-chain amino acid transport system / permease component D3093_RS29505 PF02653 Branched-chain amino acid transport system / permease component D3093_RS29510 PF13458 Periplasmic binding protein D3093_RS29530 PF01979 Amidohydrolase family D3093_RS29555 PF02653 Branched-chain amino acid transport system / permease component D3093_RS29565 PF00005 ABC transporter D3093_RS29565 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS29570 PF00005 ABC transporter D3093_RS29575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS29575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS29580 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS29580 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS29590 PF01425 Amidase D3093_RS29620 PF09370 Phosphoenolpyruvate hydrolase-like D3093_RS29620 PF02954 Bacterial regulatory protein, Fis family D3093_RS29620 PF00158 Sigma-54 interaction domain D3093_RS29630 PF09370 Phosphoenolpyruvate hydrolase-like D3093_RS29640 PF00766 Electron transfer flavoprotein FAD-binding domain D3093_RS29640 PF01012 Electron transfer flavoprotein domain D3093_RS29645 PF01012 Electron transfer flavoprotein domain D3093_RS29650 PF01565 FAD binding domain D3093_RS29650 PF02913 FAD linked oxidases, C-terminal domain D3093_RS29655 PF00171 Aldehyde dehydrogenase family D3093_RS29665 PF02558 Ketopantoate reductase PanE/ApbA D3093_RS29665 PF08546 Ketopantoate reductase PanE/ApbA C terminal D3093_RS29670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS29680 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS29685 PF16078 2-oxoglutarate dehydrogenase N-terminus D3093_RS29685 PF00676 Dehydrogenase E1 component D3093_RS29685 PF16870 2-oxoglutarate dehydrogenase C-terminal D3093_RS29685 PF02779 Transketolase, pyrimidine binding domain D3093_RS29690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS29690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS29690 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS29695 PF03466 LysR substrate binding domain D3093_RS29695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29705 PF02515 CoA-transferase family III D3093_RS29710 PF00510 Cytochrome c oxidase subunit III D3093_RS29720 PF00392 Bacterial regulatory proteins, gntR family D3093_RS29720 PF07729 FCD domain D3093_RS29725 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS29730 PF12697 Alpha/beta hydrolase family D3093_RS29760 PF00005 ABC transporter D3093_RS29760 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS29765 PF00005 ABC transporter D3093_RS29775 PF02222 ATP-grasp domain D3093_RS29785 PF01497 Periplasmic binding protein D3093_RS29790 PF01032 FecCD transport family D3093_RS29795 PF00005 ABC transporter D3093_RS29800 PF01794 Ferric reductase like transmembrane component D3093_RS29805 PF00174 Oxidoreductase molybdopterin binding domain D3093_RS29815 PF01081 KDPG and KHG aldolase D3093_RS29820 PF00392 Bacterial regulatory proteins, gntR family D3093_RS29820 PF07729 FCD domain D3093_RS29825 PF00294 pfkB family carbohydrate kinase D3093_RS29840 PF00072 Response regulator receiver domain D3093_RS29840 PF00486 Transcriptional regulatory protein, C terminal D3093_RS29845 PF00669 Bacterial flagellin N-terminal helical region D3093_RS29845 PF00700 Bacterial flagellin C-terminal helical region D3093_RS29855 PF07378 Flagellar protein FlbT D3093_RS29875 PF07690 Major Facilitator Superfamily D3093_RS29880 PF03466 LysR substrate binding domain D3093_RS29880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS29890 PF18269 T3SS EscN ATPase C-terminal domain D3093_RS29890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D3093_RS29890 PF02874 ATP synthase alpha/beta family, beta-barrel domain D3093_RS29895 PF00460 Flagella basal body rod protein D3093_RS29900 PF00460 Flagella basal body rod protein D3093_RS29900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS29905 PF02049 Flagellar hook-basal body complex protein FliE D3093_RS29910 PF01313 Bacterial export proteins, family 3 D3093_RS29920 PF00771 FHIPEP family D3093_RS29925 PF01311 Bacterial export proteins, family 1 D3093_RS29930 PF01312 FlhB HrpN YscU SpaS Family D3093_RS29960 PF02119 Flagellar P-ring protein D3093_RS29970 PF00460 Flagella basal body rod protein D3093_RS29970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS29975 PF07559 Flagellar basal body protein FlaE D3093_RS29975 PF00460 Flagella basal body rod protein D3093_RS29975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D3093_RS29980 PF00313 'Cold-shock' DNA-binding domain D3093_RS30000 PF08269 Cache domain D3093_RS30000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS30005 PF03741 Integral membrane protein TerC family D3093_RS30010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS30020 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS30030 PF07729 FCD domain D3093_RS30030 PF00392 Bacterial regulatory proteins, gntR family D3093_RS30035 PF00892 EamA-like transporter family D3093_RS30040 PF01226 Formate/nitrite transporter D3093_RS30045 PF04055 Radical SAM superfamily D3093_RS30050 PF02887 Pyruvate kinase, alpha/beta domain D3093_RS30050 PF00224 Pyruvate kinase, barrel domain D3093_RS30055 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS30055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS30055 PF00360 Phytochrome region D3093_RS30055 PF08446 PAS fold D3093_RS30055 PF01590 GAF domain D3093_RS30060 PF16736 Single Cache-like D3093_RS30060 PF00989 PAS fold D3093_RS30060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS30060 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS30065 PF00440 Bacterial regulatory proteins, tetR family D3093_RS30065 PF17922 Tetracyclin repressor-like, C-terminal domain D3093_RS30070 PF00440 Bacterial regulatory proteins, tetR family D3093_RS30075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS30075 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS30080 PF00873 AcrB/AcrD/AcrF family D3093_RS30085 PF02685 Glucokinase D3093_RS30085 PF01380 SIS domain D3093_RS30085 PF01418 Helix-turn-helix domain, rpiR family D3093_RS30090 PF02901 Pyruvate formate lyase-like D3093_RS30090 PF01228 Glycine radical D3093_RS30125 PF09077 Mu B transposition protein, C terminal D3093_RS30125 PF13401 AAA domain D3093_RS30240 PF06074 Protein of unknown function (DUF935) D3093_RS30255 PF00034 Cytochrome c D3093_RS30260 PF17762 HTH domain found in ParB protein D3093_RS30260 PF02195 ParB-like nuclease domain D3093_RS30265 PF13614 AAA domain D3093_RS30275 PF03354 Phage Terminase D3093_RS30295 PF00144 Beta-lactamase D3093_RS30315 PF07715 TonB-dependent Receptor Plug Domain D3093_RS30315 PF00593 TonB dependent receptor D3093_RS30325 PF04542 Sigma-70 region 2 D3093_RS30325 PF04545 Sigma-70, region 4 D3093_RS30335 PF00449 Urease alpha-subunit, N-terminal domain D3093_RS30335 PF01979 Amidohydrolase family D3093_RS30340 PF00392 Bacterial regulatory proteins, gntR family D3093_RS30340 PF07729 FCD domain D3093_RS30345 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS30355 PF00701 Dihydrodipicolinate synthetase family D3093_RS30360 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS30360 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS30365 PF00005 ABC transporter D3093_RS30370 PF00392 Bacterial regulatory proteins, gntR family D3093_RS30370 PF07729 FCD domain D3093_RS30385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS30385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3093_RS30395 PF13407 Periplasmic binding protein domain D3093_RS30400 PF02653 Branched-chain amino acid transport system / permease component D3093_RS30405 PF00005 ABC transporter D3093_RS30410 PF00480 ROK family D3093_RS30410 PF01325 Iron dependent repressor, N-terminal DNA binding domain D3093_RS30425 PF06761 Intracellular multiplication and human macrophage-killing D3093_RS30425 PF06744 Type VI secretion protein IcmF C-terminal D3093_RS30425 PF14331 ImcF-related N-terminal domain D3093_RS30430 PF13677 Membrane MotB of proton-channel complex MotA/MotB D3093_RS30430 PF00691 OmpA family D3093_RS30435 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D3093_RS30450 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 D3093_RS30455 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3093_RS30460 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D3093_RS30470 PF05947 Type VI secretion system, TssF D3093_RS30490 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS30490 PF07724 AAA domain (Cdc48 subfamily) D3093_RS30490 PF10431 C-terminal, D2-small domain, of ClpB protein D3093_RS30490 PF17871 AAA lid domain D3093_RS30495 PF06715 Gp5 C-terminal repeat (3 copies) D3093_RS30495 PF04717 Type VI secretion system, phage-baseplate injector D3093_RS30545 PF01297 Zinc-uptake complex component A periplasmic D3093_RS30550 PF00005 ABC transporter D3093_RS30565 PF12704 MacB-like periplasmic core domain D3093_RS30565 PF00005 ABC transporter D3093_RS30565 PF02687 FtsX-like permease family D3093_RS30570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS30575 PF07715 TonB-dependent Receptor Plug Domain D3093_RS30575 PF00593 TonB dependent receptor D3093_RS30585 PF04542 Sigma-70 region 2 D3093_RS30585 PF08281 Sigma-70, region 4 D3093_RS30615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS30625 PF01053 Cys/Met metabolism PLP-dependent enzyme D3093_RS30630 PF02910 Fumarate reductase flavoprotein C-term D3093_RS30630 PF00890 FAD binding domain D3093_RS30645 PF00005 ABC transporter D3093_RS30650 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS30655 PF07969 Amidohydrolase family D3093_RS30670 PF03180 NLPA lipoprotein D3093_RS30675 PF03328 HpcH/HpaI aldolase/citrate lyase family D3093_RS30680 PF13454 FAD-NAD(P)-binding D3093_RS30690 PF01244 Membrane dipeptidase (Peptidase family M19) D3093_RS30700 PF01571 Aminomethyltransferase folate-binding domain D3093_RS30700 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS30700 PF17806 Sarcosine oxidase A3 domain D3093_RS30700 PF08669 Glycine cleavage T-protein C-terminal barrel domain D3093_RS30710 PF01266 FAD dependent oxidoreductase D3093_RS30715 PF02653 Branched-chain amino acid transport system / permease component D3093_RS30725 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS30725 PF00005 ABC transporter D3093_RS30730 PF00005 ABC transporter D3093_RS30745 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS30745 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS30760 PF07715 TonB-dependent Receptor Plug Domain D3093_RS30760 PF00593 TonB dependent receptor D3093_RS30765 PF00005 ABC transporter D3093_RS30775 PF01032 FecCD transport family D3093_RS30780 PF00005 ABC transporter D3093_RS30780 PF00664 ABC transporter transmembrane region D3093_RS30785 PF03466 LysR substrate binding domain D3093_RS30785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS30800 PF00005 ABC transporter D3093_RS30810 PF09084 NMT1/THI5 like D3093_RS30815 PF01979 Amidohydrolase family D3093_RS30820 PF03069 Acetamidase/Formamidase family D3093_RS30830 PF01979 Amidohydrolase family D3093_RS30840 PF00529 HlyD membrane-fusion protein of T1SS D3093_RS30840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS30850 PF13533 Biotin-lipoyl like D3093_RS30855 PF00005 ABC transporter D3093_RS30865 PF07715 TonB-dependent Receptor Plug Domain D3093_RS30865 PF00593 TonB dependent receptor D3093_RS30870 PF06228 Haem utilisation ChuX/HutX D3093_RS30875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS30875 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS30875 PF02702 Osmosensitive K+ channel His kinase sensor domain D3093_RS30875 PF00582 Universal stress protein family D3093_RS30875 PF13493 Domain of unknown function (DUF4118) D3093_RS30880 PF00486 Transcriptional regulatory protein, C terminal D3093_RS30880 PF00072 Response regulator receiver domain D3093_RS30885 PF00005 ABC transporter D3093_RS30890 PF01032 FecCD transport family D3093_RS30900 PF05171 Haemin-degrading HemS.ChuX domain D3093_RS30905 PF00795 Carbon-nitrogen hydrolase D3093_RS30910 PF01613 Flavin reductase like domain D3093_RS30920 PF00005 ABC transporter D3093_RS30925 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS30935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS30935 PF03466 LysR substrate binding domain D3093_RS30945 PF00042 Globin D3093_RS30945 PF00175 Oxidoreductase NAD-binding domain D3093_RS30945 PF00970 Oxidoreductase FAD-binding domain D3093_RS30950 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS30955 PF07729 FCD domain D3093_RS30955 PF00392 Bacterial regulatory proteins, gntR family D3093_RS30965 PF00202 Aminotransferase class-III D3093_RS30975 PF01011 PQQ enzyme repeat D3093_RS30975 PF13360 PQQ-like domain D3093_RS30980 PF07730 Histidine kinase D3093_RS30980 PF00672 HAMP domain D3093_RS30980 PF16448 LapD/MoxY periplasmic domain D3093_RS30985 PF00072 Response regulator receiver domain D3093_RS30985 PF00196 Bacterial regulatory proteins, luxR family D3093_RS30990 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS30995 PF14497 Glutathione S-transferase, C-terminal domain D3093_RS30995 PF02798 Glutathione S-transferase, N-terminal domain D3093_RS31000 PF07883 Cupin domain D3093_RS31005 PF01494 FAD binding domain D3093_RS31015 PF13458 Periplasmic binding protein D3093_RS31020 PF00005 ABC transporter D3093_RS31025 PF00005 ABC transporter D3093_RS31025 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS31030 PF02653 Branched-chain amino acid transport system / permease component D3093_RS31045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3093_RS31045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3093_RS31050 PF00890 FAD binding domain D3093_RS31060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D3093_RS31060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS31080 PF00890 FAD binding domain D3093_RS31080 PF03358 NADPH-dependent FMN reductase D3093_RS31080 PF04205 FMN-binding domain D3093_RS31085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D3093_RS31090 PF00890 FAD binding domain D3093_RS31090 PF14537 Cytochrome c3 D3093_RS31100 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS31105 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31110 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31115 PF00005 ABC transporter D3093_RS31120 PF00171 Aldehyde dehydrogenase family D3093_RS31125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3093_RS31130 PF01488 Shikimate / quinate 5-dehydrogenase D3093_RS31130 PF08501 Shikimate dehydrogenase substrate binding domain D3093_RS31130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D3093_RS31135 PF00701 Dihydrodipicolinate synthetase family D3093_RS31140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D3093_RS31140 PF08666 SAF domain D3093_RS31165 PF00486 Transcriptional regulatory protein, C terminal D3093_RS31165 PF00072 Response regulator receiver domain D3093_RS31185 PF13193 AMP-binding enzyme C-terminal domain D3093_RS31185 PF00501 AMP-binding enzyme D3093_RS31190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS31190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS31190 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS31195 PF00364 Biotin-requiring enzyme D3093_RS31195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D3093_RS31195 PF02817 e3 binding domain D3093_RS31200 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS31205 PF02780 Transketolase, C-terminal domain D3093_RS31205 PF00364 Biotin-requiring enzyme D3093_RS31205 PF02779 Transketolase, pyrimidine binding domain D3093_RS31210 PF00676 Dehydrogenase E1 component D3093_RS31220 PF13458 Periplasmic binding protein D3093_RS31230 PF02653 Branched-chain amino acid transport system / permease component D3093_RS31235 PF00005 ABC transporter D3093_RS31235 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS31240 PF00005 ABC transporter D3093_RS31245 PF00465 Iron-containing alcohol dehydrogenase D3093_RS31255 PF00108 Thiolase, N-terminal domain D3093_RS31255 PF02803 Thiolase, C-terminal domain D3093_RS31270 PF01575 MaoC like domain D3093_RS31280 PF13458 Periplasmic binding protein D3093_RS31285 PF02653 Branched-chain amino acid transport system / permease component D3093_RS31290 PF00005 ABC transporter D3093_RS31290 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS31295 PF00005 ABC transporter D3093_RS31380 PF13416 Bacterial extracellular solute-binding protein D3093_RS31385 PF00005 ABC transporter D3093_RS31385 PF08402 TOBE domain D3093_RS31390 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31395 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31400 PF05544 Proline racemase D3093_RS31405 PF00392 Bacterial regulatory proteins, gntR family D3093_RS31405 PF07729 FCD domain D3093_RS31415 PF00330 Aconitase family (aconitate hydratase) D3093_RS31420 PF00694 Aconitase C-terminal domain D3093_RS31430 PF00005 ABC transporter D3093_RS31435 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31450 PF14032 PknH-like extracellular domain D3093_RS31450 PF00069 Protein kinase domain D3093_RS31475 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D3093_RS31480 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D3093_RS31485 PF00459 Inositol monophosphatase family D3093_RS31495 PF08402 TOBE domain D3093_RS31495 PF00005 ABC transporter D3093_RS31500 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31505 PF08220 DeoR-like helix-turn-helix domain D3093_RS31505 PF00455 DeoR C terminal sensor domain D3093_RS31540 PF00005 ABC transporter D3093_RS31545 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31555 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS31560 PF02515 CoA-transferase family III D3093_RS31565 PF01425 Amidase D3093_RS31585 PF00376 MerR family regulatory protein D3093_RS31585 PF09278 MerR, DNA binding D3093_RS31590 PF00403 Heavy-metal-associated domain D3093_RS31595 PF01252 Signal peptidase (SPase) II D3093_RS31600 PF00392 Bacterial regulatory proteins, gntR family D3093_RS31600 PF00155 Aminotransferase class I and II D3093_RS31605 PF00892 EamA-like transporter family D3093_RS31610 PF00072 Response regulator receiver domain D3093_RS31610 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS31610 PF13426 PAS domain D3093_RS31610 PF08448 PAS fold D3093_RS31610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS31620 PF00392 Bacterial regulatory proteins, gntR family D3093_RS31620 PF07702 UTRA domain D3093_RS31630 PF02397 Bacterial sugar transferase D3093_RS31645 PF03808 Glycosyl transferase WecB/TagA/CpsF family D3093_RS31695 PF00593 TonB dependent receptor D3093_RS31695 PF07715 TonB-dependent Receptor Plug Domain D3093_RS31700 PF08402 TOBE domain D3093_RS31700 PF00005 ABC transporter D3093_RS31720 PF00005 ABC transporter D3093_RS31720 PF08402 TOBE domain D3093_RS31740 PF13193 AMP-binding enzyme C-terminal domain D3093_RS31740 PF00501 AMP-binding enzyme D3093_RS31745 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS31750 PF00107 Zinc-binding dehydrogenase D3093_RS31750 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS31760 PF01614 Bacterial transcriptional regulator D3093_RS31760 PF09339 IclR helix-turn-helix domain D3093_RS31765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D3093_RS31770 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31775 PF12911 N-terminal TM domain of oligopeptide transport permease C D3093_RS31775 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31780 PF00005 ABC transporter D3093_RS31780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS31785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D3093_RS31785 PF00005 ABC transporter D3093_RS31795 PF00072 Response regulator receiver domain D3093_RS31800 PF00356 Bacterial regulatory proteins, lacI family D3093_RS31805 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D3093_RS31805 PF02837 Glycosyl hydrolases family 2, sugar binding domain D3093_RS31805 PF00703 Glycosyl hydrolases family 2 D3093_RS31805 PF16355 Domain of unknown function (DUF4982) D3093_RS31810 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS31815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D3093_RS31815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS31820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS31825 PF01055 Glycosyl hydrolases family 31 D3093_RS31825 PF13802 Galactose mutarotase-like D3093_RS31825 PF17137 Domain of unknown function (DUF5110) D3093_RS31825 PF16338 Domain of unknown function (DUF4968) D3093_RS31835 PF03741 Integral membrane protein TerC family D3093_RS31840 PF01042 Endoribonuclease L-PSP D3093_RS31845 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS31850 PF01042 Endoribonuclease L-PSP D3093_RS31855 PF01266 FAD dependent oxidoreductase D3093_RS31860 PF04324 BFD-like [2Fe-2S] binding domain D3093_RS31860 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS31870 PF01266 FAD dependent oxidoreductase D3093_RS31875 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31880 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31885 PF00005 ABC transporter D3093_RS31885 PF08402 TOBE domain D3093_RS31895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS31895 PF03466 LysR substrate binding domain D3093_RS31900 PF00005 ABC transporter D3093_RS31905 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS31915 PF00701 Dihydrodipicolinate synthetase family D3093_RS31920 PF01070 FMN-dependent dehydrogenase D3093_RS31925 PF02913 FAD linked oxidases, C-terminal domain D3093_RS31925 PF01565 FAD binding domain D3093_RS31930 PF07883 Cupin domain D3093_RS31930 PF01381 Helix-turn-helix D3093_RS31940 PF00593 TonB dependent receptor D3093_RS31940 PF07715 TonB-dependent Receptor Plug Domain D3093_RS31965 PF05853 beta-keto acid cleavage enzyme D3093_RS31970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3093_RS31970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3093_RS31975 PF00158 Sigma-54 interaction domain D3093_RS31975 PF00072 Response regulator receiver domain D3093_RS31975 PF02954 Bacterial regulatory protein, Fis family D3093_RS31985 PF00873 AcrB/AcrD/AcrF family D3093_RS31990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS31995 PF05198 Translation initiation factor IF-3, N-terminal domain D3093_RS31995 PF00707 Translation initiation factor IF-3, C-terminal domain D3093_RS32000 PF01165 Ribosomal protein S21 D3093_RS32005 PF12282 Signal transduction histidine kinase D3093_RS32005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS32005 PF07568 Histidine kinase D3093_RS32010 PF00072 Response regulator receiver domain D3093_RS32020 PF00005 ABC transporter D3093_RS32025 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS32025 PF00005 ABC transporter D3093_RS32040 PF13458 Periplasmic binding protein D3093_RS32045 PF07690 Major Facilitator Superfamily D3093_RS32050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D3093_RS32055 PF02585 GlcNAc-PI de-N-acetylase D3093_RS32060 PF03737 Aldolase/RraA D3093_RS32065 PF04303 PrpF protein D3093_RS32070 PF04909 Amidohydrolase D3093_RS32080 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D3093_RS32085 PF14759 Reductase C-terminal D3093_RS32085 PF07992 Pyridine nucleotide-disulphide oxidoreductase D3093_RS32090 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS32095 PF00067 Cytochrome P450 D3093_RS32110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS32110 PF03466 LysR substrate binding domain D3093_RS32120 PF04542 Sigma-70 region 2 D3093_RS32120 PF08281 Sigma-70, region 4 D3093_RS32125 PF07715 TonB-dependent Receptor Plug Domain D3093_RS32125 PF00593 TonB dependent receptor D3093_RS32135 PF00664 ABC transporter transmembrane region D3093_RS32135 PF00005 ABC transporter D3093_RS32140 PF07715 TonB-dependent Receptor Plug Domain D3093_RS32140 PF00593 TonB dependent receptor D3093_RS32150 PF01032 FecCD transport family D3093_RS32155 PF08021 Siderophore-interacting FAD-binding domain D3093_RS32155 PF04954 Siderophore-interacting protein D3093_RS32160 PF00005 ABC transporter D3093_RS32175 PF00108 Thiolase, N-terminal domain D3093_RS32175 PF02803 Thiolase, C-terminal domain D3093_RS32180 PF07690 Major Facilitator Superfamily D3093_RS32185 PF03466 LysR substrate binding domain D3093_RS32185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS32195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D3093_RS32200 PF00873 AcrB/AcrD/AcrF family D3093_RS32215 PF13545 Crp-like helix-turn-helix domain D3093_RS32230 PF01136 Peptidase family U32 D3093_RS32240 PF00034 Cytochrome c D3093_RS32255 PF02416 mttA/Hcf106 family D3093_RS32265 PF05573 NosL D3093_RS32270 PF12679 ABC-2 family transporter protein D3093_RS32275 PF00005 ABC transporter D3093_RS32280 PF05048 Periplasmic copper-binding protein (NosD) D3093_RS32290 PF13473 Cupredoxin-like domain D3093_RS32290 PF18793 Nitrous oxide reductase propeller repeat 2 D3093_RS32290 PF18764 Nitrous oxide reductase propeller repeat D3093_RS32295 PF04205 FMN-binding domain D3093_RS32295 PF12801 4Fe-4S binding domain D3093_RS32310 PF02653 Branched-chain amino acid transport system / permease component D3093_RS32315 PF00005 ABC transporter D3093_RS32320 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS32320 PF00005 ABC transporter D3093_RS32330 PF03358 NADPH-dependent FMN reductase D3093_RS32330 PF04205 FMN-binding domain D3093_RS32330 PF00890 FAD binding domain D3093_RS32335 PF02515 CoA-transferase family III D3093_RS32345 PF00171 Aldehyde dehydrogenase family D3093_RS32350 PF09339 IclR helix-turn-helix domain D3093_RS32350 PF01614 Bacterial transcriptional regulator D3093_RS32360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS32360 PF03466 LysR substrate binding domain D3093_RS32370 PF07690 Major Facilitator Superfamily D3093_RS32375 PF01638 HxlR-like helix-turn-helix D3093_RS32380 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D3093_RS32380 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D3093_RS32385 PF03450 CO dehydrogenase flavoprotein C-terminal domain D3093_RS32385 PF00941 FAD binding domain in molybdopterin dehydrogenase D3093_RS32390 PF00111 2Fe-2S iron-sulfur cluster binding domain D3093_RS32390 PF01799 [2Fe-2S] binding domain D3093_RS32405 PF03781 Sulfatase-modifying factor enzyme 1 D3093_RS32415 PF17863 AAA lid domain D3093_RS32415 PF07726 ATPase family associated with various cellular activities (AAA) D3093_RS32435 PF07584 Aerotolerance regulator N-terminal D3093_RS32435 PF13519 von Willebrand factor type A domain D3093_RS32450 PF00884 Sulfatase D3093_RS32455 PF02909 Tetracyclin repressor-like, C-terminal domain D3093_RS32455 PF00440 Bacterial regulatory proteins, tetR family D3093_RS32485 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32485 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS32485 PF14765 Polyketide synthase dehydratase D3093_RS32485 PF00550 Phosphopantetheine attachment site D3093_RS32485 PF00698 Acyl transferase domain D3093_RS32485 PF08659 KR domain D3093_RS32485 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32485 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32510 PF00873 AcrB/AcrD/AcrF family D3093_RS32530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS32545 PF05995 Cysteine dioxygenase type I D3093_RS32555 PF12833 Helix-turn-helix domain D3093_RS32555 PF02311 AraC-like ligand binding domain D3093_RS32570 PF13533 Biotin-lipoyl like D3093_RS32580 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS32585 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS32590 PF00005 ABC transporter D3093_RS32595 PF00497 Bacterial extracellular solute-binding proteins, family 3 D3093_RS32600 PF01042 Endoribonuclease L-PSP D3093_RS32605 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D3093_RS32610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D3093_RS32610 PF00356 Bacterial regulatory proteins, lacI family D3093_RS32615 PF01648 4'-phosphopantetheinyl transferase superfamily D3093_RS32625 PF00550 Phosphopantetheine attachment site D3093_RS32625 PF08659 KR domain D3093_RS32625 PF14765 Polyketide synthase dehydratase D3093_RS32625 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32625 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32625 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32625 PF00698 Acyl transferase domain D3093_RS32630 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal D3093_RS32630 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal D3093_RS32635 PF03109 ABC1 family D3093_RS32645 PF14765 Polyketide synthase dehydratase D3093_RS32645 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32645 PF08659 KR domain D3093_RS32645 PF00668 Condensation domain D3093_RS32645 PF00550 Phosphopantetheine attachment site D3093_RS32645 PF13193 AMP-binding enzyme C-terminal domain D3093_RS32645 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32645 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32645 PF00501 AMP-binding enzyme D3093_RS32650 PF14765 Polyketide synthase dehydratase D3093_RS32650 PF00550 Phosphopantetheine attachment site D3093_RS32650 PF08242 Methyltransferase domain D3093_RS32650 PF08659 KR domain D3093_RS32650 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32650 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32650 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32655 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32655 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32655 PF08659 KR domain D3093_RS32655 PF00550 Phosphopantetheine attachment site D3093_RS32655 PF14765 Polyketide synthase dehydratase D3093_RS32655 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32675 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS32680 PF00550 Phosphopantetheine attachment site D3093_RS32690 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32690 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32690 PF00550 Phosphopantetheine attachment site D3093_RS32690 PF14765 Polyketide synthase dehydratase D3093_RS32690 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32690 PF08659 KR domain D3093_RS32695 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32695 PF00668 Condensation domain D3093_RS32695 PF13193 AMP-binding enzyme C-terminal domain D3093_RS32695 PF00501 AMP-binding enzyme D3093_RS32695 PF08659 KR domain D3093_RS32695 PF14765 Polyketide synthase dehydratase D3093_RS32695 PF00550 Phosphopantetheine attachment site D3093_RS32695 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32695 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32700 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32700 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32700 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32700 PF08659 KR domain D3093_RS32700 PF14765 Polyketide synthase dehydratase D3093_RS32700 PF08242 Methyltransferase domain D3093_RS32700 PF00550 Phosphopantetheine attachment site D3093_RS32705 PF00698 Acyl transferase domain D3093_RS32720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D3093_RS32725 PF00005 ABC transporter D3093_RS32730 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS32735 PF00884 Sulfatase D3093_RS32735 PF12411 Choline sulfatase enzyme C terminal D3093_RS32740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS32750 PF00528 Binding-protein-dependent transport system inner membrane component D3093_RS32755 PF00005 ABC transporter D3093_RS32770 PF00092 von Willebrand factor type A domain D3093_RS32775 PF07728 AAA domain (dynein-related subfamily) D3093_RS32775 PF08406 CbbQ/NirQ/NorQ C-terminal D3093_RS32780 PF00115 Cytochrome C and Quinol oxidase polypeptide I D3093_RS32785 PF00034 Cytochrome c D3093_RS32790 PF02195 ParB-like nuclease domain D3093_RS32790 PF17762 HTH domain found in ParB protein D3093_RS32830 PF01554 MatE D3093_RS32835 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS32835 PF00550 Phosphopantetheine attachment site D3093_RS32835 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS32835 PF00668 Condensation domain D3093_RS32835 PF13193 AMP-binding enzyme C-terminal domain D3093_RS32835 PF00501 AMP-binding enzyme D3093_RS32835 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS32835 PF00202 Aminotransferase class-III D3093_RS32840 PF01212 Beta-eliminating lyase D3093_RS32850 PF00698 Acyl transferase domain D3093_RS32855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D3093_RS32865 PF00872 Transposase, Mutator family D3093_RS32895 PF00580 UvrD/REP helicase N-terminal domain D3093_RS32895 PF13361 UvrD-like helicase C-terminal domain D3093_RS32900 PF13614 AAA domain D3093_RS32905 PF02195 ParB-like nuclease domain D3093_RS32905 PF17762 HTH domain found in ParB protein D3093_RS32910 PF00239 Resolvase, N terminal domain D3093_RS32945 PF02146 Sir2 family D3093_RS32955 PF00589 Phage integrase family D3093_RS32955 PF13495 Phage integrase, N-terminal SAM-like domain D3093_RS32965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D3093_RS32965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D3093_RS32970 PF01012 Electron transfer flavoprotein domain D3093_RS32970 PF00766 Electron transfer flavoprotein FAD-binding domain D3093_RS32975 PF01012 Electron transfer flavoprotein domain D3093_RS32980 PF00672 HAMP domain D3093_RS32980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D3093_RS32985 PF11862 Domain of unknown function (DUF3382) D3093_RS32985 PF02653 Branched-chain amino acid transport system / permease component D3093_RS32990 PF02653 Branched-chain amino acid transport system / permease component D3093_RS32995 PF00005 ABC transporter D3093_RS33000 PF00005 ABC transporter D3093_RS33000 PF12399 Branched-chain amino acid ATP-binding cassette transporter D3093_RS33005 PF00378 Enoyl-CoA hydratase/isomerase D3093_RS33010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D3093_RS33010 PF02770 Acyl-CoA dehydrogenase, middle domain D3093_RS33010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D3093_RS33025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D3093_RS33025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D3093_RS33030 PF00171 Aldehyde dehydrogenase family D3093_RS33035 PF02515 CoA-transferase family III D3093_RS33050 PF00239 Resolvase, N terminal domain D3093_RS33055 PF01557 Fumarylacetoacetate (FAA) hydrolase family D3093_RS33060 PF01842 ACT domain D3093_RS33060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D3093_RS33060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D3093_RS33075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D3093_RS33080 PF03480 Bacterial extracellular solute-binding protein, family 7 D3093_RS33095 PF12833 Helix-turn-helix domain D3093_RS33100 PF01161 Phosphatidylethanolamine-binding protein D3093_RS33105 PF01979 Amidohydrolase family D3093_RS33105 PF13382 Adenine deaminase C-terminal domain D3093_RS33135 PF00512 His Kinase A (phospho-acceptor) domain D3093_RS33135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D3093_RS33165 PF02733 Dak1 domain D3093_RS33170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D3093_RS33170 PF00205 Thiamine pyrophosphate enzyme, central domain D3093_RS33170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D3093_RS33175 PF02515 CoA-transferase family III D3093_RS33180 PF01144 Coenzyme A transferase D3093_RS33190 PF00356 Bacterial regulatory proteins, lacI family D3093_RS33195 PF00005 ABC transporter D3093_RS33200 PF02653 Branched-chain amino acid transport system / permease component D3093_RS33205 PF13407 Periplasmic binding protein domain D3093_RS33210 PF01144 Coenzyme A transferase D3093_RS33245 PF00664 ABC transporter transmembrane region D3093_RS33245 PF00005 ABC transporter D3093_RS33245 PF04954 Siderophore-interacting protein D3093_RS33245 PF08021 Siderophore-interacting FAD-binding domain D3093_RS33250 PF00005 ABC transporter D3093_RS33255 PF01032 FecCD transport family D3093_RS33260 PF01032 FecCD transport family D3093_RS33265 PF00005 ABC transporter D3093_RS33270 PF01497 Periplasmic binding protein D3093_RS33275 PF00593 TonB dependent receptor D3093_RS33275 PF07715 TonB-dependent Receptor Plug Domain D3093_RS33285 PF00082 Subtilase family D3093_RS33290 PF00082 Subtilase family D3093_RS33320 PF13419 Haloacid dehalogenase-like hydrolase D3093_RS33330 PF01447 Thermolysin metallopeptidase, catalytic domain D3093_RS33330 PF02868 Thermolysin metallopeptidase, alpha-helical domain D3093_RS33330 PF03413 Peptidase propeptide and YPEB domain D3093_RS33330 PF07504 Fungalysin/Thermolysin Propeptide Motif D3093_RS33395 PF01223 DNA/RNA non-specific endonuclease D3093_RS33420 PF13520 Amino acid permease D3093_RS33440 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D3093_RS33440 PF00775 Dioxygenase D3093_RS33460 PF01867 CRISPR associated protein Cas1 D3093_RS33490 PF00271 Helicase conserved C-terminal domain D3093_RS33490 PF00270 DEAD/DEAH box helicase D3093_RS33490 PF18019 HD domain D3093_RS33495 PF18019 HD domain D3093_RS33495 PF18395 Cas3 C-terminal domain D3093_RS33520 PF07655 Secretin N-terminal domain D3093_RS33520 PF00263 Bacterial type II and III secretion system protein D3093_RS33635 PF03466 LysR substrate binding domain D3093_RS33635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D3093_RS33650 PF01047 MarR family D3093_RS33700 PF17755 UvrA DNA-binding domain D3093_RS33710 PF13408 Recombinase zinc beta ribbon domain D3093_RS33710 PF00239 Resolvase, N terminal domain D3093_RS33710 PF07508 Recombinase D3093_RS33720 PF01734 Patatin-like phospholipase D3093_RS33795 PF00593 TonB dependent receptor D3093_RS33795 PF07715 TonB-dependent Receptor Plug Domain D3093_RS33805 PF12833 Helix-turn-helix domain D3093_RS33805 PF02311 AraC-like ligand binding domain D3093_RS33855 PF01381 Helix-turn-helix D3093_RS33860 PF01381 Helix-turn-helix D3093_RS33905 PF02661 Fic/DOC family D3093_RS33905 PF12728 Helix-turn-helix domain D3093_RS33940 PF01131 DNA topoisomerase D3093_RS33940 PF01751 Toprim domain D3093_RS33955 PF17862 AAA+ lid domain D3093_RS33955 PF00004 ATPase family associated with various cellular activities (AAA) D3093_RS33955 PF06480 FtsH Extracellular D3093_RS33955 PF01434 Peptidase family M41 D3093_RS34025 PF01527 Transposase D3093_RS34030 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB D3093_RS34040 PF00216 Bacterial DNA-binding protein D3093_RS34135 PF10137 Predicted nucleotide-binding protein containing TIR-like domain D3093_RS34145 PF07804 HipA-like C-terminal domain D3093_RS34145 PF13657 HipA N-terminal domain D3093_RS34155 PF00239 Resolvase, N terminal domain D3093_RS34160 PF00437 Type II/IV secretion system protein D3093_RS34195 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D3093_RS34300 PF00155 Aminotransferase class I and II D3093_RS34305 PF04055 Radical SAM superfamily D3093_RS34305 PF12544 Lysine-2,3-aminomutase D3093_RS34310 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D3093_RS34315 PF00550 Phosphopantetheine attachment site D3093_RS34315 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS34315 PF00698 Acyl transferase domain D3093_RS34315 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS34315 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS34315 PF00668 Condensation domain D3093_RS34320 PF00550 Phosphopantetheine attachment site D3093_RS34320 PF00668 Condensation domain D3093_RS34320 PF13193 AMP-binding enzyme C-terminal domain D3093_RS34320 PF00501 AMP-binding enzyme D3093_RS34330 PF04072 Leucine carboxyl methyltransferase D3093_RS34340 PF00501 AMP-binding enzyme D3093_RS34340 PF13193 AMP-binding enzyme C-terminal domain D3093_RS34340 PF00550 Phosphopantetheine attachment site D3093_RS34340 PF00668 Condensation domain D3093_RS34350 PF00202 Aminotransferase class-III D3093_RS34350 PF13193 AMP-binding enzyme C-terminal domain D3093_RS34350 PF00550 Phosphopantetheine attachment site D3093_RS34350 PF16197 Ketoacyl-synthetase C-terminal extension D3093_RS34350 PF00668 Condensation domain D3093_RS34350 PF00501 AMP-binding enzyme D3093_RS34350 PF02801 Beta-ketoacyl synthase, C-terminal domain D3093_RS34350 PF00109 Beta-ketoacyl synthase, N-terminal domain D3093_RS34360 PF01554 MatE D3093_RS34385 PF01695 IstB-like ATP binding protein D3093_RS34390 PF00665 Integrase core domain D3093_RS34430 PF02371 Transposase IS116/IS110/IS902 family D3093_RS34430 PF01548 Transposase D3093_RS34450 PF13439 Glycosyltransferase Family 4 D3093_RS34460 PF13439 Glycosyltransferase Family 4 D3093_RS34460 PF00534 Glycosyl transferases group 1 D3093_RS34475 PF01370 NAD dependent epimerase/dehydratase family D3093_RS34480 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D3093_RS34480 PF00413 Matrixin D3093_RS34480 PF08548 Peptidase M10 serralysin C terminal D3093_RS34500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3093_RS34500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3093_RS34500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3093_RS34505 PF00005 ABC transporter D3093_RS34510 PF01061 ABC-2 type transporter D3093_RS34540 PF13439 Glycosyltransferase Family 4 D3093_RS34540 PF00534 Glycosyl transferases group 1 D3093_RS34545 PF13580 SIS domain D3093_RS34565 PF01370 NAD dependent epimerase/dehydratase family D3093_RS34570 PF16363 GDP-mannose 4,6 dehydratase D3093_RS34575 PF01050 Mannose-6-phosphate isomerase D3093_RS34575 PF00483 Nucleotidyl transferase D3093_RS34585 PF00009 Elongation factor Tu GTP binding domain D3093_RS34590 PF01507 Phosphoadenosine phosphosulfate reductase family D3093_RS34600 PF01370 NAD dependent epimerase/dehydratase family D3093_RS34615 PF08241 Methyltransferase domain D3093_RS34625 PF10119 Predicted methyltransferase regulatory domain D3093_RS34625 PF13847 Methyltransferase domain D3093_RS34635 PF00535 Glycosyl transferase family 2 D3093_RS34640 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D3093_RS34645 PF16363 GDP-mannose 4,6 dehydratase D3093_RS34650 PF04321 RmlD substrate binding domain D3093_RS34655 PF00483 Nucleotidyl transferase D3093_RS34660 PF05711 Macrocin-O-methyltransferase (TylF) D3093_RS34665 PF00005 ABC transporter D3093_RS34670 PF00535 Glycosyl transferase family 2 D3093_RS34680 PF01061 ABC-2 type transporter D3093_RS34710 PF08645 Polynucleotide kinase 3 phosphatase D3093_RS34715 PF01209 ubiE/COQ5 methyltransferase family D3093_RS34720 PF00696 Amino acid kinase family D3093_RS34725 PF00696 Amino acid kinase family D3093_RS34745 PF00293 NUDIX domain D3093_RS34755 PF01970 Tripartite tricarboxylate transporter TctA family D3093_RS34760 PF03737 Aldolase/RraA D3093_RS34770 PF02719 Polysaccharide biosynthesis protein D3093_RS34775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3093_RS34785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D3093_RS34785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D3093_RS34785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D3093_RS34790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D3093_RS34790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D3093_RS34790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D3093_RS34790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D3093_RS34795 PF02195 ParB-like nuclease domain D3093_RS34795 PF17762 HTH domain found in ParB protein D3093_RS34800 PF13614 AAA domain D3093_RS34810 PF01266 FAD dependent oxidoreductase D3093_RS34825 PF00664 ABC transporter transmembrane region D3093_RS34825 PF03412 Peptidase C39 family D3093_RS34825 PF00005 ABC transporter D3093_RS34840 PF00239 Resolvase, N terminal domain D3093_RS34870 PF02348 Cytidylyltransferase D3093_RS34890 PF16363 GDP-mannose 4,6 dehydratase D3093_RS34895 PF02348 Cytidylyltransferase D3093_RS34900 PF00535 Glycosyl transferase family 2 D3093_RS34905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D3093_RS34920 PF08666 SAF domain D3093_RS34920 PF03102 NeuB family D3093_RS34925 PF00733 Asparagine synthase D3093_RS34925 PF13537 Glutamine amidotransferase domain D3093_RS34930 PF13439 Glycosyltransferase Family 4 D3093_RS34930 PF00534 Glycosyl transferases group 1 D3093_RS34950 PF01695 IstB-like ATP binding protein D3093_RS34955 PF00665 Integrase core domain D3093_RS35010 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS35015 PF00216 Bacterial DNA-binding protein D3093_RS35065 PF01548 Transposase D3093_RS35065 PF02371 Transposase IS116/IS110/IS902 family D3093_RS35085 PF01464 Transglycosylase SLT domain D3093_RS35125 PF00959 Phage lysozyme D3093_RS35140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D3093_RS35175 PF01381 Helix-turn-helix D3093_RS35200 PF00107 Zinc-binding dehydrogenase D3093_RS35200 PF08240 Alcohol dehydrogenase GroES-like domain D3093_RS35205 PF01638 HxlR-like helix-turn-helix D3093_RS35290 PF00075 RNase H D3093_RS35315 PF01381 Helix-turn-helix D3093_RS35370 PF05958 tRNA (Uracil-5-)-methyltransferase D3093_RS35410 PF13545 Crp-like helix-turn-helix domain D3093_RS35410 PF00027 Cyclic nucleotide-binding domain D3093_RS35450 PF02075 Crossover junction endodeoxyribonuclease RuvC D3093_RS35505 PF00772 DnaB-like helicase N terminal domain D3093_RS35505 PF03796 DnaB-like helicase C terminal domain D3093_RS35520 PF01555 DNA methylase D3093_RS35545 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) D3093_RS35550 PF01867 CRISPR associated protein Cas1 D3093_RS35560 PF09704 CRISPR-associated protein (Cas_Cas5) D3093_RS35565 PF09344 CT1975-like protein D3093_RS35580 PF18019 HD domain D3093_RS35580 PF00271 Helicase conserved C-terminal domain D3093_RS35580 PF00270 DEAD/DEAH box helicase D3093_RS35625 PF07693 KAP family P-loop domain D3093_RS35770 PF01381 Helix-turn-helix D3093_RS35770 PF00145 C-5 cytosine-specific DNA methylase D3093_RS35775 PF00872 Transposase, Mutator family D3093_RS35785 PF13649 Methyltransferase domain D3093_RS35805 PF17288 Terminase RNAseH like domain D3093_RS35805 PF04466 Phage terminase large subunit D3093_RS35880 PF05443 ROS/MUCR transcriptional regulator protein D3093_RS35885 PF00216 Bacterial DNA-binding protein