locus-tag class description AMK58_RS00005 PF01966 HD domain AMK58_RS00005 PF08335 GlnD PII-uridylyltransferase AMK58_RS00005 PF01909 Nucleotidyltransferase domain AMK58_RS00015 PF13369 Transglutaminase-like superfamily AMK58_RS00020 PF02021 Uncharacterised protein family UPF0102 AMK58_RS00040 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS00045 PF01740 STAS domain AMK58_RS00055 PF01624 MutS domain I AMK58_RS00055 PF05190 MutS family domain IV AMK58_RS00055 PF00488 MutS domain V AMK58_RS00055 PF05188 MutS domain II AMK58_RS00055 PF05192 MutS domain III AMK58_RS00070 PF08335 GlnD PII-uridylyltransferase AMK58_RS00070 PF01909 Nucleotidyltransferase domain AMK58_RS00070 PF01966 HD domain AMK58_RS00090 PF13458 Periplasmic binding protein AMK58_RS00095 PF00072 Response regulator receiver domain AMK58_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS00095 PF09308 LuxQ, periplasmic AMK58_RS00095 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS00100 PF03023 Lipid II flippase MurJ AMK58_RS00105 PF00579 tRNA synthetases class I (W and Y) AMK58_RS00110 PF01470 Pyroglutamyl peptidase AMK58_RS00120 PF02810 SEC-C motif AMK58_RS00135 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS00140 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS00160 PF17284 Spermidine synthase tetramerisation domain AMK58_RS00165 PF02675 S-adenosylmethionine decarboxylase AMK58_RS00170 PF07722 Peptidase C26 AMK58_RS00175 PF12802 MarR family AMK58_RS00180 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK58_RS00190 PF00300 Histidine phosphatase superfamily (branch 1) AMK58_RS00195 PF00534 Glycosyl transferases group 1 AMK58_RS00195 PF13439 Glycosyltransferase Family 4 AMK58_RS00200 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS00200 PF05230 MASE2 domain AMK58_RS00205 PF13439 Glycosyltransferase Family 4 AMK58_RS00205 PF00534 Glycosyl transferases group 1 AMK58_RS00215 PF00664 ABC transporter transmembrane region AMK58_RS00215 PF00005 ABC transporter AMK58_RS00220 PF00027 Cyclic nucleotide-binding domain AMK58_RS00220 PF13302 Acetyltransferase (GNAT) domain AMK58_RS00240 PF00005 ABC transporter AMK58_RS00240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS00245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00255 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS00265 PF12706 Beta-lactamase superfamily domain AMK58_RS00275 PF07995 Glucose / Sorbosone dehydrogenase AMK58_RS00285 PF00072 Response regulator receiver domain AMK58_RS00285 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS00290 PF00925 GTP cyclohydrolase II AMK58_RS00305 PF01168 Alanine racemase, N-terminal domain AMK58_RS00330 PF08264 Anticodon-binding domain of tRNA AMK58_RS00330 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS00330 PF13603 Leucyl-tRNA synthetase, Domain 2 AMK58_RS00350 PF17762 HTH domain found in ParB protein AMK58_RS00350 PF02195 ParB-like nuclease domain AMK58_RS00355 PF13614 AAA domain AMK58_RS00360 PF02527 rRNA small subunit methyltransferase G AMK58_RS00365 PF13932 GidA associated domain AMK58_RS00365 PF01134 Glucose inhibited division protein A AMK58_RS00370 PF01926 50S ribosome-binding GTPase AMK58_RS00370 PF10396 GTP-binding protein TrmE N-terminus AMK58_RS00370 PF12631 MnmE helical domain AMK58_RS00385 PF03190 Protein of unknown function, DUF255 AMK58_RS00390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK58_RS00390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMK58_RS00395 PF00107 Zinc-binding dehydrogenase AMK58_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS00400 PF00929 Exonuclease AMK58_RS00405 PF01121 Dephospho-CoA kinase AMK58_RS00410 PF01488 Shikimate / quinate 5-dehydrogenase AMK58_RS00410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMK58_RS00410 PF08501 Shikimate dehydrogenase substrate binding domain AMK58_RS00415 PF02545 Maf-like protein AMK58_RS00420 PF03618 Kinase/pyrophosphorylase AMK58_RS00425 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMK58_RS00430 PF03653 Uncharacterised protein family (UPF0093) AMK58_RS00445 PF00689 Cation transporting ATPase, C-terminus AMK58_RS00445 PF00690 Cation transporter/ATPase, N-terminus AMK58_RS00450 PF07497 Rho termination factor, RNA-binding domain AMK58_RS00450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS00450 PF07498 Rho termination factor, N-terminal domain AMK58_RS00455 PF02556 Preprotein translocase subunit SecB AMK58_RS00465 PF04280 Tim44-like domain AMK58_RS00470 PF03562 MltA specific insert domain AMK58_RS00470 PF06725 3D domain AMK58_RS00480 PF01230 HIT domain AMK58_RS00485 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMK58_RS00490 PF00977 Histidine biosynthesis protein AMK58_RS00495 PF00977 Histidine biosynthesis protein AMK58_RS00500 PF00583 Acetyltransferase (GNAT) family AMK58_RS00505 PF00117 Glutamine amidotransferase class-I AMK58_RS00510 PF00475 Imidazoleglycerol-phosphate dehydratase AMK58_RS00520 PF00227 Proteasome subunit AMK58_RS00525 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS00525 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS00525 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS00530 PF00005 ABC transporter AMK58_RS00535 PF13188 PAS domain AMK58_RS00535 PF13426 PAS domain AMK58_RS00535 PF00989 PAS fold AMK58_RS00535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS00550 PF02589 LUD domain AMK58_RS00555 PF13183 4Fe-4S dicluster domain AMK58_RS00555 PF11870 Domain of unknown function (DUF3390) AMK58_RS00555 PF02589 LUD domain AMK58_RS00560 PF02754 Cysteine-rich domain AMK58_RS00565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS00570 PF01810 LysE type translocator AMK58_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS00575 PF03466 LysR substrate binding domain AMK58_RS00580 PF00950 ABC 3 transport family AMK58_RS00585 PF00005 ABC transporter AMK58_RS00590 PF01297 Zinc-uptake complex component A periplasmic AMK58_RS00595 PF05173 Dihydrodipicolinate reductase, C-terminus AMK58_RS00595 PF01113 Dihydrodipicolinate reductase, N-terminus AMK58_RS00600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK58_RS00600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMK58_RS00610 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS00610 PF10576 Iron-sulfur binding domain of endonuclease III AMK58_RS00610 PF00633 Helix-hairpin-helix motif AMK58_RS00625 PF00294 pfkB family carbohydrate kinase AMK58_RS00630 PF01925 Sulfite exporter TauE/SafE AMK58_RS00650 PF00672 HAMP domain AMK58_RS00650 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS00655 PF01106 NifU-like domain AMK58_RS00665 PF01427 D-ala-D-ala dipeptidase AMK58_RS00670 PF00814 Glycoprotease family AMK58_RS00685 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS00700 PF04055 Radical SAM superfamily AMK58_RS00700 PF01938 TRAM domain AMK58_RS00700 PF00919 Uncharacterized protein family UPF0004 AMK58_RS00705 PF02562 PhoH-like protein AMK58_RS00710 PF02130 Uncharacterized protein family UPF0054 AMK58_RS00715 PF03471 Transporter associated domain AMK58_RS00715 PF00571 CBS domain AMK58_RS00720 PF00795 Carbon-nitrogen hydrolase AMK58_RS00725 PF01381 Helix-turn-helix AMK58_RS00730 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMK58_RS00730 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMK58_RS00730 PF02772 S-adenosylmethionine synthetase, central domain AMK58_RS00735 PF02390 Putative methyltransferase AMK58_RS00740 PF03992 Antibiotic biosynthesis monooxygenase AMK58_RS00745 PF17384 RimP C-terminal SH3 domain AMK58_RS00745 PF02576 RimP N-terminal domain AMK58_RS00750 PF00575 S1 RNA binding domain AMK58_RS00750 PF08529 NusA N-terminal domain AMK58_RS00750 PF13184 NusA-like KH domain AMK58_RS00760 PF00009 Elongation factor Tu GTP binding domain AMK58_RS00760 PF03144 Elongation factor Tu domain 2 AMK58_RS00760 PF11987 Translation-initiation factor 2 AMK58_RS00760 PF08364 Bacterial translation initiation factor IF-2 associated region AMK58_RS00760 PF04760 Translation initiation factor IF-2, N-terminal region AMK58_RS00765 PF02033 Ribosome-binding factor A AMK58_RS00770 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMK58_RS00770 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMK58_RS00775 PF00312 Ribosomal protein S15 AMK58_RS00780 PF03725 3' exoribonuclease family, domain 2 AMK58_RS00780 PF00575 S1 RNA binding domain AMK58_RS00780 PF00013 KH domain AMK58_RS00780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMK58_RS00780 PF01138 3' exoribonuclease family, domain 1 AMK58_RS00790 PF04228 Putative neutral zinc metallopeptidase AMK58_RS00800 PF04055 Radical SAM superfamily AMK58_RS00800 PF12544 Lysine-2,3-aminomutase AMK58_RS00805 PF03009 Glycerophosphoryl diester phosphodiesterase family AMK58_RS00820 PF02915 Rubrerythrin AMK58_RS00835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK58_RS00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS00845 PF13380 CoA binding domain AMK58_RS00845 PF00583 Acetyltransferase (GNAT) family AMK58_RS00845 PF13607 Succinyl-CoA ligase like flavodoxin domain AMK58_RS00850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMK58_RS00850 PF00056 lactate/malate dehydrogenase, NAD binding domain AMK58_RS00855 PF00719 Inorganic pyrophosphatase AMK58_RS00860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS00870 PF03109 ABC1 family AMK58_RS00875 PF01209 ubiE/COQ5 methyltransferase family AMK58_RS00890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMK58_RS00890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMK58_RS00900 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS00905 PF01649 Ribosomal protein S20 AMK58_RS00910 PF00308 Bacterial dnaA protein AMK58_RS00910 PF08299 Bacterial dnaA protein helix-turn-helix AMK58_RS00910 PF11638 DnaA N-terminal domain AMK58_RS00915 PF13416 Bacterial extracellular solute-binding protein AMK58_RS00920 PF00005 ABC transporter AMK58_RS00920 PF08402 TOBE domain AMK58_RS00925 PF05425 Copper resistance protein D AMK58_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00960 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMK58_RS00960 PF07732 Multicopper oxidase AMK58_RS00960 PF07731 Multicopper oxidase AMK58_RS00960 PF00394 Multicopper oxidase AMK58_RS00965 PF05958 tRNA (Uracil-5-)-methyltransferase AMK58_RS00970 PF17785 PUA-like domain AMK58_RS00970 PF10672 S-adenosylmethionine-dependent methyltransferase AMK58_RS00980 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK58_RS00995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS00995 PF00034 Cytochrome c AMK58_RS00995 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMK58_RS01000 PF13746 4Fe-4S dicluster domain AMK58_RS01000 PF12801 4Fe-4S binding domain AMK58_RS01000 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS01010 PF00403 Heavy-metal-associated domain AMK58_RS01015 PF13545 Crp-like helix-turn-helix domain AMK58_RS01015 PF00027 Cyclic nucleotide-binding domain AMK58_RS01020 PF00390 Malic enzyme, N-terminal domain AMK58_RS01020 PF03949 Malic enzyme, NAD binding domain AMK58_RS01020 PF01515 Phosphate acetyl/butaryl transferase AMK58_RS01025 PF16736 Single Cache-like AMK58_RS01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01025 PF00989 PAS fold AMK58_RS01025 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01030 PF12849 PBP superfamily domain AMK58_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01045 PF00005 ABC transporter AMK58_RS01050 PF01895 PhoU domain AMK58_RS01055 PF00072 Response regulator receiver domain AMK58_RS01055 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS01070 PF00899 ThiF family AMK58_RS01080 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS01085 PF02082 Transcriptional regulator AMK58_RS01090 PF00692 dUTPase AMK58_RS01095 PF04127 DNA / pantothenate metabolism flavoprotein AMK58_RS01095 PF02441 Flavoprotein AMK58_RS01100 PF00072 Response regulator receiver domain AMK58_RS01100 PF00158 Sigma-54 interaction domain AMK58_RS01100 PF02954 Bacterial regulatory protein, Fis family AMK58_RS01105 PF00313 'Cold-shock' DNA-binding domain AMK58_RS01110 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01110 PF01627 Hpt domain AMK58_RS01110 PF00672 HAMP domain AMK58_RS01110 PF00072 Response regulator receiver domain AMK58_RS01110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01115 PF00950 ABC 3 transport family AMK58_RS01120 PF00950 ABC 3 transport family AMK58_RS01125 PF00005 ABC transporter AMK58_RS01130 PF01297 Zinc-uptake complex component A periplasmic AMK58_RS01155 PF01475 Ferric uptake regulator family AMK58_RS01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01165 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01165 PF00989 PAS fold AMK58_RS01170 PF00183 Hsp90 protein AMK58_RS01185 PF01479 S4 domain AMK58_RS01190 PF03741 Integral membrane protein TerC family AMK58_RS01190 PF03471 Transporter associated domain AMK58_RS01205 PF06779 Uncharacterised MFS-type transporter YbfB AMK58_RS01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01210 PF03466 LysR substrate binding domain AMK58_RS01215 PF11953 Domain of unknown function (DUF3470) AMK58_RS01215 PF00037 4Fe-4S binding domain AMK58_RS01225 PF00561 alpha/beta hydrolase fold AMK58_RS01235 PF01435 Peptidase family M48 AMK58_RS01240 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS01240 PF00672 HAMP domain AMK58_RS01240 PF02743 Cache domain AMK58_RS01245 PF04545 Sigma-70, region 4 AMK58_RS01245 PF00140 Sigma-70 factor, region 1.2 AMK58_RS01245 PF04542 Sigma-70 region 2 AMK58_RS01255 PF01632 Ribosomal protein L35 AMK58_RS01260 PF00453 Ribosomal protein L20 AMK58_RS01265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMK58_RS01265 PF01409 tRNA synthetases class II core domain (F) AMK58_RS01270 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMK58_RS01270 PF01588 Putative tRNA binding domain AMK58_RS01270 PF03147 Ferredoxin-fold anticodon binding domain AMK58_RS01270 PF03483 B3/4 domain AMK58_RS01270 PF03484 tRNA synthetase B5 domain AMK58_RS01280 PF11849 Domain of unknown function (DUF3369) AMK58_RS01290 PF03466 LysR substrate binding domain AMK58_RS01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01300 PF00679 Elongation factor G C-terminus AMK58_RS01300 PF00009 Elongation factor Tu GTP binding domain AMK58_RS01300 PF03144 Elongation factor Tu domain 2 AMK58_RS01300 PF06421 GTP-binding protein LepA C-terminus AMK58_RS01310 PF08323 Starch synthase catalytic domain AMK58_RS01310 PF00534 Glycosyl transferases group 1 AMK58_RS01315 PF00483 Nucleotidyl transferase AMK58_RS01320 PF00909 Ammonium Transporter Family AMK58_RS01330 PF06445 GyrI-like small molecule binding domain AMK58_RS01345 PF12973 ChrR Cupin-like domain AMK58_RS01350 PF04542 Sigma-70 region 2 AMK58_RS01350 PF04545 Sigma-70, region 4 AMK58_RS01360 PF04055 Radical SAM superfamily AMK58_RS01375 PF00764 Arginosuccinate synthase AMK58_RS01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS01380 PF12729 Four helix bundle sensory module for signal transduction AMK58_RS01380 PF00672 HAMP domain AMK58_RS01390 PF00581 Rhodanese-like domain AMK58_RS01395 PF06803 Protein of unknown function (DUF1232) AMK58_RS01400 PF00892 EamA-like transporter family AMK58_RS01410 PF03918 Cytochrome C biogenesis protein AMK58_RS01415 PF08534 Redoxin AMK58_RS01420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMK58_RS01420 PF01578 Cytochrome C assembly protein AMK58_RS01425 PF03100 CcmE AMK58_RS01435 PF01578 Cytochrome C assembly protein AMK58_RS01440 PF03466 LysR substrate binding domain AMK58_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01450 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMK58_RS01455 PF02146 Sir2 family AMK58_RS01460 PF03167 Uracil DNA glycosylase superfamily AMK58_RS01470 PF01329 Pterin 4 alpha carbinolamine dehydratase AMK58_RS01475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMK58_RS01475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMK58_RS01480 PF01544 CorA-like Mg2+ transporter protein AMK58_RS01485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMK58_RS01485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMK58_RS01490 PF02594 Uncharacterised ACR, YggU family COG1872 AMK58_RS01495 PF02325 YGGT family AMK58_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01515 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS01525 PF00005 ABC transporter AMK58_RS01530 PF06826 Predicted Permease Membrane Region AMK58_RS01530 PF02080 TrkA-C domain AMK58_RS01535 PF02080 TrkA-C domain AMK58_RS01535 PF06826 Predicted Permease Membrane Region AMK58_RS01540 PF00005 ABC transporter AMK58_RS01545 PF03379 CcmB protein AMK58_RS01550 PF00085 Thioredoxin AMK58_RS01555 PF12705 PD-(D/E)XK nuclease superfamily AMK58_RS01555 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS01555 PF13361 UvrD-like helicase C-terminal domain AMK58_RS01565 PF12705 PD-(D/E)XK nuclease superfamily AMK58_RS01570 PF12804 MobA-like NTP transferase domain AMK58_RS01580 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMK58_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS01600 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS01600 PF00072 Response regulator receiver domain AMK58_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01605 PF00672 HAMP domain AMK58_RS01605 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS01615 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS01620 PF00072 Response regulator receiver domain AMK58_RS01620 PF01627 Hpt domain AMK58_RS01620 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01620 PF00672 HAMP domain AMK58_RS01625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS01630 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS01635 PF00290 Tryptophan synthase alpha chain AMK58_RS01640 PF01039 Carboxyl transferase domain AMK58_RS01640 PF17848 Acetyl-coA carboxylase zinc finger domain AMK58_RS01645 PF08245 Mur ligase middle domain AMK58_RS01645 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS01670 PF00989 PAS fold AMK58_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01670 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01670 PF13426 PAS domain AMK58_RS01670 PF13188 PAS domain AMK58_RS01675 PF01227 GTP cyclohydrolase I AMK58_RS01685 PF04073 Aminoacyl-tRNA editing domain AMK58_RS01695 PF01227 GTP cyclohydrolase I AMK58_RS01700 PF04379 ApaG domain AMK58_RS01730 PF00271 Helicase conserved C-terminal domain AMK58_RS01730 PF00270 DEAD/DEAH box helicase AMK58_RS01795 PF00012 Hsp70 protein AMK58_RS01800 PF13538 UvrD-like helicase C-terminal domain AMK58_RS01815 PF03793 PASTA domain AMK58_RS01815 PF00069 Protein kinase domain AMK58_RS01880 PF00271 Helicase conserved C-terminal domain AMK58_RS01880 PF00270 DEAD/DEAH box helicase AMK58_RS01880 PF08148 DSHCT (NUC185) domain AMK58_RS01885 PF00589 Phage integrase family AMK58_RS01900 PF00005 ABC transporter AMK58_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01920 PF01627 Hpt domain AMK58_RS01920 PF00672 HAMP domain AMK58_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01920 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01920 PF00072 Response regulator receiver domain AMK58_RS01920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS01930 PF08448 PAS fold AMK58_RS01930 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01930 PF00072 Response regulator receiver domain AMK58_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01930 PF13188 PAS domain AMK58_RS01940 PF07722 Peptidase C26 AMK58_RS01945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS01945 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01955 PF13396 Phospholipase_D-nuclease N-terminal AMK58_RS01955 PF13091 PLD-like domain AMK58_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS01965 PF00691 OmpA family AMK58_RS01965 PF13488 Glycine zipper AMK58_RS01995 PF00595 PDZ domain AMK58_RS01995 PF13180 PDZ domain AMK58_RS02025 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMK58_RS02025 PF03900 Porphobilinogen deaminase, C-terminal domain AMK58_RS02035 PF00814 Glycoprotease family AMK58_RS02045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMK58_RS02045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMK58_RS02050 PF03795 YCII-related domain AMK58_RS02065 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS02065 PF00501 AMP-binding enzyme AMK58_RS02065 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS02080 PF07896 Protein of unknown function (DUF1674) AMK58_RS02085 PF01435 Peptidase family M48 AMK58_RS02100 PF01189 16S rRNA methyltransferase RsmB/F AMK58_RS02100 PF01029 NusB family AMK58_RS02110 PF02142 MGS-like domain AMK58_RS02110 PF01808 AICARFT/IMPCHase bienzyme AMK58_RS02140 PF05088 Bacterial NAD-glutamate dehydrogenase AMK58_RS02145 PF00072 Response regulator receiver domain AMK58_RS02155 PF08269 Cache domain AMK58_RS02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02165 PF03547 Membrane transport protein AMK58_RS02170 PF03737 Aldolase/RraA AMK58_RS02185 PF00085 Thioredoxin AMK58_RS02190 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS02190 PF05362 Lon protease (S16) C-terminal proteolytic domain AMK58_RS02190 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMK58_RS02195 PF03966 Trm112p-like protein AMK58_RS02225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMK58_RS02225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMK58_RS02230 PF02308 MgtC family AMK58_RS02235 PF07690 Major Facilitator Superfamily AMK58_RS02245 PF09456 RcsC Alpha-Beta-Loop (ABL) AMK58_RS02245 PF00072 Response regulator receiver domain AMK58_RS02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02245 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02255 PF13416 Bacterial extracellular solute-binding protein AMK58_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS02270 PF08402 TOBE domain AMK58_RS02270 PF00005 ABC transporter AMK58_RS02275 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS02275 PF00043 Glutathione S-transferase, C-terminal domain AMK58_RS02295 PF00270 DEAD/DEAH box helicase AMK58_RS02295 PF00271 Helicase conserved C-terminal domain AMK58_RS02300 PF01475 Ferric uptake regulator family AMK58_RS02315 PF00072 Response regulator receiver domain AMK58_RS02315 PF01627 Hpt domain AMK58_RS02315 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02315 PF00672 HAMP domain AMK58_RS02315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS02320 PF08448 PAS fold AMK58_RS02320 PF08447 PAS fold AMK58_RS02320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02325 PF01740 STAS domain AMK58_RS02335 PF00072 Response regulator receiver domain AMK58_RS02335 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS02355 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS02355 PF00072 Response regulator receiver domain AMK58_RS02360 PF00072 Response regulator receiver domain AMK58_RS02360 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS02370 PF01740 STAS domain AMK58_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02375 PF02743 Cache domain AMK58_RS02375 PF00672 HAMP domain AMK58_RS02380 PF00072 Response regulator receiver domain AMK58_RS02380 PF01339 CheB methylesterase AMK58_RS02385 PF03975 CheD chemotactic sensory transduction AMK58_RS02390 PF01739 CheR methyltransferase, SAM binding domain AMK58_RS02390 PF03705 CheR methyltransferase, all-alpha domain AMK58_RS02395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02395 PF00672 HAMP domain AMK58_RS02395 PF02203 Tar ligand binding domain homologue AMK58_RS02400 PF01584 CheW-like domain AMK58_RS02405 PF01627 Hpt domain AMK58_RS02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02405 PF02895 Signal transducing histidine kinase, homodimeric domain AMK58_RS02405 PF01584 CheW-like domain AMK58_RS02410 PF00072 Response regulator receiver domain AMK58_RS02420 PF18698 Histidine kinase sensor domain AMK58_RS02420 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02420 PF00989 PAS fold AMK58_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02420 PF00672 HAMP domain AMK58_RS02430 PF00929 Exonuclease AMK58_RS02435 PF00072 Response regulator receiver domain AMK58_RS02435 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS02450 PF04279 Intracellular septation protein A AMK58_RS02460 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AMK58_RS02460 PF01048 Phosphorylase superfamily AMK58_RS02465 PF00448 SRP54-type protein, GTPase domain AMK58_RS02465 PF02881 SRP54-type protein, helical bundle domain AMK58_RS02470 PF00919 Uncharacterized protein family UPF0004 AMK58_RS02470 PF04055 Radical SAM superfamily AMK58_RS02475 PF01678 Diaminopimelate epimerase AMK58_RS02500 PF00694 Aconitase C-terminal domain AMK58_RS02505 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS02520 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK58_RS02525 PF08543 Phosphomethylpyrimidine kinase AMK58_RS02530 PF03641 Possible lysine decarboxylase AMK58_RS02540 PF03969 AFG1-like ATPase AMK58_RS02545 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS02550 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02555 PF00364 Biotin-requiring enzyme AMK58_RS02555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMK58_RS02555 PF02817 e3 binding domain AMK58_RS02560 PF00676 Dehydrogenase E1 component AMK58_RS02560 PF16078 2-oxoglutarate dehydrogenase N-terminus AMK58_RS02560 PF02779 Transketolase, pyrimidine binding domain AMK58_RS02560 PF16870 2-oxoglutarate dehydrogenase C-terminal AMK58_RS02565 PF02629 CoA binding domain AMK58_RS02565 PF00549 CoA-ligase AMK58_RS02570 PF00549 CoA-ligase AMK58_RS02570 PF08442 ATP-grasp domain AMK58_RS02575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMK58_RS02575 PF00056 lactate/malate dehydrogenase, NAD binding domain AMK58_RS02590 PF01921 tRNA synthetases class I (K) AMK58_RS02595 PF00893 Small Multidrug Resistance protein AMK58_RS02605 PF00912 Transglycosylase AMK58_RS02610 PF04851 Type III restriction enzyme, res subunit AMK58_RS02610 PF13307 Helicase C-terminal domain AMK58_RS02610 PF00929 Exonuclease AMK58_RS02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02615 PF08269 Cache domain AMK58_RS02625 PF04204 Homoserine O-succinyltransferase AMK58_RS02635 PF00672 HAMP domain AMK58_RS02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS02650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS02655 PF13673 Acetyltransferase (GNAT) domain AMK58_RS02660 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS02660 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS02670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMK58_RS02680 PF00890 FAD binding domain AMK58_RS02680 PF02910 Fumarate reductase flavoprotein C-term AMK58_RS02685 PF13085 2Fe-2S iron-sulfur cluster binding domain AMK58_RS02685 PF13237 4Fe-4S dicluster domain AMK58_RS02695 PF01063 Amino-transferase class IV AMK58_RS02755 PF01223 DNA/RNA non-specific endonuclease AMK58_RS02780 PF13520 Amino acid permease AMK58_RS02800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMK58_RS02800 PF00775 Dioxygenase AMK58_RS02810 PF03070 TENA/THI-4/PQQC family AMK58_RS02815 PF13811 Domain of unknown function (DUF4186) AMK58_RS02820 PF02796 Helix-turn-helix domain of resolvase AMK58_RS02820 PF00239 Resolvase, N terminal domain AMK58_RS02840 PF13358 DDE superfamily endonuclease AMK58_RS02845 PF01734 Patatin-like phospholipase AMK58_RS02850 PF01609 Transposase DDE domain AMK58_RS02855 PF00872 Transposase, Mutator family AMK58_RS02870 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS02870 PF13361 UvrD-like helicase C-terminal domain AMK58_RS02870 PF12705 PD-(D/E)XK nuclease superfamily AMK58_RS02890 PF07690 Major Facilitator Superfamily AMK58_RS02950 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS02950 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS02950 PF00563 EAL domain AMK58_RS02985 PF12708 Pectate lyase superfamily protein AMK58_RS02985 PF13229 Right handed beta helix region AMK58_RS02985 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMK58_RS03015 PF01180 Dihydroorotate dehydrogenase AMK58_RS03025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK58_RS03025 PF02824 TGS domain AMK58_RS03025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS03025 PF03129 Anticodon binding domain AMK58_RS03030 PF05198 Translation initiation factor IF-3, N-terminal domain AMK58_RS03030 PF00707 Translation initiation factor IF-3, C-terminal domain AMK58_RS03035 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS03035 PF00912 Transglycosylase AMK58_RS03060 PF00534 Glycosyl transferases group 1 AMK58_RS03060 PF13477 Glycosyl transferase 4-like AMK58_RS03080 PF03929 PepSY-associated TM region AMK58_RS03085 PF00593 TonB dependent receptor AMK58_RS03085 PF07715 TonB-dependent Receptor Plug Domain AMK58_RS03100 PF00884 Sulfatase AMK58_RS03115 PF13519 von Willebrand factor type A domain AMK58_RS03115 PF07584 Aerotolerance regulator N-terminal AMK58_RS03135 PF17863 AAA lid domain AMK58_RS03135 PF07726 ATPase family associated with various cellular activities (AAA) AMK58_RS03145 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS03160 PF03466 LysR substrate binding domain AMK58_RS03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS03165 PF02515 CoA-transferase family III AMK58_RS03170 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS03180 PF01425 Amidase AMK58_RS03195 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS03200 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS03200 PF11862 Domain of unknown function (DUF3382) AMK58_RS03205 PF00005 ABC transporter AMK58_RS03205 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS03210 PF00005 ABC transporter AMK58_RS03225 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS03235 PF00005 ABC transporter AMK58_RS03265 PF00092 von Willebrand factor type A domain AMK58_RS03270 PF13180 PDZ domain AMK58_RS03290 PF01322 Cytochrome C' AMK58_RS03295 PF00155 Aminotransferase class I and II AMK58_RS03300 PF06965 Na+/H+ antiporter 1 AMK58_RS03310 PF00679 Elongation factor G C-terminus AMK58_RS03310 PF00009 Elongation factor Tu GTP binding domain AMK58_RS03310 PF03764 Elongation factor G, domain IV AMK58_RS03310 PF14492 Elongation Factor G, domain II AMK58_RS03315 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMK58_RS03315 PF02558 Ketopantoate reductase PanE/ApbA AMK58_RS03325 PF00210 Ferritin-like domain AMK58_RS03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS03350 PF06258 Mitochondrial fission ELM1 AMK58_RS03355 PF01037 Lrp/AsnC ligand binding domain AMK58_RS03365 PF03449 Transcription elongation factor, N-terminal AMK58_RS03365 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS03370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK58_RS03370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMK58_RS03370 PF02142 MGS-like domain AMK58_RS03385 PF02308 MgtC family AMK58_RS03395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMK58_RS03395 PF09397 Ftsk gamma domain AMK58_RS03395 PF01580 FtsK/SpoIIIE family AMK58_RS03395 PF17854 FtsK alpha domain AMK58_RS03415 PF01625 Peptide methionine sulfoxide reductase AMK58_RS03425 PF00588 SpoU rRNA Methylase family AMK58_RS03425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS03430 PF00106 short chain dehydrogenase AMK58_RS03435 PF09335 SNARE associated Golgi protein AMK58_RS03445 PF00034 Cytochrome c AMK58_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS03450 PF03459 TOBE domain AMK58_RS03455 PF00171 Aldehyde dehydrogenase family AMK58_RS03470 PF00989 PAS fold AMK58_RS03470 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03470 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03470 PF01627 Hpt domain AMK58_RS03470 PF00072 Response regulator receiver domain AMK58_RS03480 PF00005 ABC transporter AMK58_RS03495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS03515 PF13360 PQQ-like domain AMK58_RS03515 PF01011 PQQ enzyme repeat AMK58_RS03520 PF00072 Response regulator receiver domain AMK58_RS03520 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03530 PF00005 ABC transporter AMK58_RS03550 PF00034 Cytochrome c AMK58_RS03565 PF02600 Disulfide bond formation protein DsbB AMK58_RS03570 PF03232 Ubiquinone biosynthesis protein COQ7 AMK58_RS03580 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS03585 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03585 PF09308 LuxQ, periplasmic AMK58_RS03585 PF00072 Response regulator receiver domain AMK58_RS03595 PF00072 Response regulator receiver domain AMK58_RS03595 PF08769 Sporulation initiation factor Spo0A C terminal AMK58_RS03600 PF08298 PrkA AAA domain AMK58_RS03600 PF06798 PrkA serine protein kinase C-terminal domain AMK58_RS03605 PF04285 Protein of unknown function (DUF444) AMK58_RS03610 PF04293 SpoVR like protein AMK58_RS03615 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS03615 PF00672 HAMP domain AMK58_RS03625 PF00270 DEAD/DEAH box helicase AMK58_RS03625 PF04408 Helicase associated domain (HA2) AMK58_RS03625 PF08482 ATP-dependent helicase C-terminal AMK58_RS03625 PF00271 Helicase conserved C-terminal domain AMK58_RS03630 PF00005 ABC transporter AMK58_RS03650 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS03650 PF00072 Response regulator receiver domain AMK58_RS03675 PF01145 SPFH domain / Band 7 family AMK58_RS03675 PF16200 C-terminal region of band_7 AMK58_RS03680 PF01594 AI-2E family transporter AMK58_RS03690 PF05145 Transition state regulatory protein AbrB AMK58_RS03695 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMK58_RS03705 PF01513 ATP-NAD kinase AMK58_RS03710 PF06463 Molybdenum Cofactor Synthesis C AMK58_RS03710 PF04055 Radical SAM superfamily AMK58_RS03725 PF17149 Periplasmic sensor domain found in signal transduction proteins AMK58_RS03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03725 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03725 PF01627 Hpt domain AMK58_RS03725 PF00072 Response regulator receiver domain AMK58_RS03725 PF00672 HAMP domain AMK58_RS03735 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03735 PF00989 PAS fold AMK58_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03740 PF02954 Bacterial regulatory protein, Fis family AMK58_RS03740 PF00072 Response regulator receiver domain AMK58_RS03740 PF00158 Sigma-54 interaction domain AMK58_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03745 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03750 PF01515 Phosphate acetyl/butaryl transferase AMK58_RS03755 PF00871 Acetokinase family AMK58_RS03765 PF00571 CBS domain AMK58_RS03795 PF00072 Response regulator receiver domain AMK58_RS03795 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03800 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03800 PF00072 Response regulator receiver domain AMK58_RS03805 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS03805 PF13361 UvrD-like helicase C-terminal domain AMK58_RS03830 PF01321 Creatinase/Prolidase N-terminal domain AMK58_RS03830 PF00557 Metallopeptidase family M24 AMK58_RS03830 PF01321 Creatinase/Prolidase N-terminal domain AMK58_RS03830 PF00557 Metallopeptidase family M24 AMK58_RS03835 PF00072 Response regulator receiver domain AMK58_RS03850 PF13525 Outer membrane lipoprotein AMK58_RS03855 PF02463 RecF/RecN/SMC N terminal domain AMK58_RS03875 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMK58_RS03875 PF12826 Helix-hairpin-helix motif AMK58_RS03875 PF01653 NAD-dependent DNA ligase adenylation domain AMK58_RS03875 PF00533 BRCA1 C Terminus (BRCT) domain AMK58_RS03875 PF03120 NAD-dependent DNA ligase OB-fold domain AMK58_RS03885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMK58_RS03890 PF12327 FtsZ family, C-terminal domain AMK58_RS03890 PF00091 Tubulin/FtsZ family, GTPase domain AMK58_RS03895 PF02491 SHS2 domain inserted in FTSA AMK58_RS03900 PF03799 Cell division protein FtsQ AMK58_RS03900 PF08478 POTRA domain, FtsQ-type AMK58_RS03905 PF07478 D-ala D-ala ligase C-terminus AMK58_RS03905 PF01820 D-ala D-ala ligase N-terminus AMK58_RS03910 PF01565 FAD binding domain AMK58_RS03910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMK58_RS03915 PF01225 Mur ligase family, catalytic domain AMK58_RS03915 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03915 PF08245 Mur ligase middle domain AMK58_RS03925 PF04101 Glycosyltransferase family 28 C-terminal domain AMK58_RS03925 PF03033 Glycosyltransferase family 28 N-terminal domain AMK58_RS03930 PF01098 Cell cycle protein AMK58_RS03935 PF08245 Mur ligase middle domain AMK58_RS03940 PF00953 Glycosyl transferase family 4 AMK58_RS03940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMK58_RS03945 PF08245 Mur ligase middle domain AMK58_RS03945 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03945 PF01225 Mur ligase family, catalytic domain AMK58_RS03950 PF01225 Mur ligase family, catalytic domain AMK58_RS03950 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03950 PF08245 Mur ligase middle domain AMK58_RS03955 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS03955 PF03717 Penicillin-binding Protein dimerisation domain AMK58_RS03965 PF01795 MraW methylase family AMK58_RS03970 PF02381 MraZ protein, putative antitoxin-like AMK58_RS03980 PF01510 N-acetylmuramoyl-L-alanine amidase AMK58_RS03990 PF00005 ABC transporter AMK58_RS03990 PF16326 ABC transporter C-terminal domain AMK58_RS03995 PF00226 DnaJ domain AMK58_RS03995 PF05099 Tellurite resistance protein TerB AMK58_RS04005 PF05378 Hydantoinase/oxoprolinase N-terminal region AMK58_RS04005 PF01968 Hydantoinase/oxoprolinase AMK58_RS04010 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04010 PF01565 FAD binding domain AMK58_RS04015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS04015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04030 PF00072 Response regulator receiver domain AMK58_RS04030 PF13426 PAS domain AMK58_RS04055 PF00348 Polyprenyl synthetase AMK58_RS04065 PF05175 Methyltransferase small domain AMK58_RS04070 PF01343 Peptidase family S49 AMK58_RS04070 PF06965 Na+/H+ antiporter 1 AMK58_RS04085 PF02091 Glycyl-tRNA synthetase alpha subunit AMK58_RS04090 PF05746 DALR anticodon binding domain AMK58_RS04090 PF02092 Glycyl-tRNA synthetase beta subunit AMK58_RS04095 PF08502 LeuA allosteric (dimerisation) domain AMK58_RS04095 PF00682 HMGL-like AMK58_RS04100 PF04172 LrgB-like family AMK58_RS04105 PF03788 LrgA family AMK58_RS04110 PF12146 Serine aminopeptidase, S33 AMK58_RS04125 PF00107 Zinc-binding dehydrogenase AMK58_RS04125 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS04125 PF13823 Alcohol dehydrogenase GroES-associated AMK58_RS04135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS04135 PF11941 Domain of unknown function (DUF3459) AMK58_RS04135 PF00128 Alpha amylase, catalytic domain AMK58_RS04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04145 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04175 PF01471 Putative peptidoglycan binding domain AMK58_RS04175 PF01520 N-acetylmuramoyl-L-alanine amidase AMK58_RS04180 PF05951 Bacterial protein of unknown function (DUF882) AMK58_RS04190 PF01381 Helix-turn-helix AMK58_RS04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04195 PF00672 HAMP domain AMK58_RS04220 PF01220 Dehydroquinase class II AMK58_RS04225 PF00364 Biotin-requiring enzyme AMK58_RS04230 PF02785 Biotin carboxylase C-terminal domain AMK58_RS04230 PF00289 Biotin carboxylase, N-terminal domain AMK58_RS04230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK58_RS04235 PF00445 Ribonuclease T2 family AMK58_RS04240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMK58_RS04255 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS04255 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS04255 PF17871 AAA lid domain AMK58_RS04255 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS04255 PF02861 Clp amino terminal domain, pathogenicity island component AMK58_RS04260 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMK58_RS04285 PF00768 D-alanyl-D-alanine carboxypeptidase AMK58_RS04285 PF07943 Penicillin-binding protein 5, C-terminal domain AMK58_RS04290 PF12849 PBP superfamily domain AMK58_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS04300 PF02634 FdhD/NarQ family AMK58_RS04305 PF12804 MobA-like NTP transferase domain AMK58_RS04330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS04330 PF00384 Molybdopterin oxidoreductase AMK58_RS04330 PF01568 Molydopterin dinucleotide binding domain AMK58_RS04335 PF13247 4Fe-4S dicluster domain AMK58_RS04360 PF00596 Class II Aldolase and Adducin N-terminal domain AMK58_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04365 PF00672 HAMP domain AMK58_RS04365 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04365 PF01627 Hpt domain AMK58_RS04365 PF00072 Response regulator receiver domain AMK58_RS04365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS04370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMK58_RS04375 PF00430 ATP synthase B/B' CF(0) AMK58_RS04380 PF00430 ATP synthase B/B' CF(0) AMK58_RS04385 PF00137 ATP synthase subunit C AMK58_RS04390 PF00119 ATP synthase A chain AMK58_RS04400 PF02630 SCO1/SenC AMK58_RS04410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04410 PF08269 Cache domain AMK58_RS04415 PF02562 PhoH-like protein AMK58_RS04420 PF03775 Septum formation inhibitor MinC, C-terminal domain AMK58_RS04420 PF05209 Septum formation inhibitor MinC, N-terminal domain AMK58_RS04425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS04430 PF03776 Septum formation topological specificity factor MinE AMK58_RS04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04450 PF17200 Single Cache domain 2 AMK58_RS04450 PF00672 HAMP domain AMK58_RS04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04455 PF13378 Enolase C-terminal domain-like AMK58_RS04455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMK58_RS04465 PF00266 Aminotransferase class-V AMK58_RS04475 PF01329 Pterin 4 alpha carbinolamine dehydratase AMK58_RS04485 PF02685 Glucokinase AMK58_RS04490 PF00982 Glycosyltransferase family 20 AMK58_RS04505 PF00672 HAMP domain AMK58_RS04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04510 PF08269 Cache domain AMK58_RS04510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04515 PF01274 Malate synthase AMK58_RS04520 PF13538 UvrD-like helicase C-terminal domain AMK58_RS04520 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMK58_RS04520 PF14490 Helix-hairpin-helix containing domain AMK58_RS04525 PF00313 'Cold-shock' DNA-binding domain AMK58_RS04535 PF01627 Hpt domain AMK58_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04535 PF00072 Response regulator receiver domain AMK58_RS04535 PF00672 HAMP domain AMK58_RS04535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS04535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04540 PF12729 Four helix bundle sensory module for signal transduction AMK58_RS04540 PF00672 HAMP domain AMK58_RS04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS04560 PF00766 Electron transfer flavoprotein FAD-binding domain AMK58_RS04560 PF01012 Electron transfer flavoprotein domain AMK58_RS04565 PF01012 Electron transfer flavoprotein domain AMK58_RS04570 PF03206 Nitrogen fixation protein NifW AMK58_RS04575 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS04580 PF00682 HMGL-like AMK58_RS04585 PF00266 Aminotransferase class-V AMK58_RS04590 PF01592 NifU-like N terminal domain AMK58_RS04590 PF01106 NifU-like domain AMK58_RS04590 PF04324 BFD-like [2Fe-2S] binding domain AMK58_RS04595 PF01521 Iron-sulphur cluster biosynthesis AMK58_RS04610 PF13237 4Fe-4S dicluster domain AMK58_RS04615 PF05082 Rop-like AMK58_RS04620 PF03270 Protein of unknown function, DUF269 AMK58_RS04625 PF02579 Dinitrogenase iron-molybdenum cofactor AMK58_RS04630 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04635 PF04324 BFD-like [2Fe-2S] binding domain AMK58_RS04635 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04640 PF08447 PAS fold AMK58_RS04640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04640 PF13426 PAS domain AMK58_RS04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS04655 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04655 PF11844 Domain of unknown function (DUF3364) AMK58_RS04660 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04665 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AMK58_RS04675 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) AMK58_RS04680 PF03747 ADP-ribosylglycohydrolase AMK58_RS04685 PF03960 ArsC family AMK58_RS04690 PF13230 Glutamine amidotransferases class-II AMK58_RS04695 PF02525 Flavodoxin-like fold AMK58_RS04705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK58_RS04715 PF06988 NifT/FixU protein AMK58_RS04720 PF00266 Aminotransferase class-V AMK58_RS04730 PF04319 NifZ domain AMK58_RS04735 PF01816 Leucine rich repeat variant AMK58_RS04735 PF05484 LRV protein FeS4 cluster AMK58_RS04745 PF12838 4Fe-4S dicluster domain AMK58_RS04750 PF04055 Radical SAM superfamily AMK58_RS04750 PF02579 Dinitrogenase iron-molybdenum cofactor AMK58_RS04755 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS04765 PF13185 GAF domain AMK58_RS04765 PF02954 Bacterial regulatory protein, Fis family AMK58_RS04765 PF00158 Sigma-54 interaction domain AMK58_RS04770 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS04770 PF08362 YcdC-like protein, C-terminal region AMK58_RS04780 PF00005 ABC transporter AMK58_RS04795 PF03411 Penicillin-insensitive murein endopeptidase AMK58_RS04805 PF00444 Ribosomal protein L36 AMK58_RS04810 PF01565 FAD binding domain AMK58_RS04810 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04815 PF01565 FAD binding domain AMK58_RS04820 PF02754 Cysteine-rich domain AMK58_RS04820 PF13183 4Fe-4S dicluster domain AMK58_RS04825 PF01066 CDP-alcohol phosphatidyltransferase AMK58_RS04840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK58_RS04840 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMK58_RS04840 PF02770 Acyl-CoA dehydrogenase, middle domain AMK58_RS04840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK58_RS04855 PF01565 FAD binding domain AMK58_RS04855 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04860 PF03481 Putative GTP-binding controlling metal-binding AMK58_RS04860 PF01300 Telomere recombination AMK58_RS04865 PF13614 AAA domain AMK58_RS04875 PF00578 AhpC/TSA family AMK58_RS04880 PF08335 GlnD PII-uridylyltransferase AMK58_RS04880 PF03710 Glutamate-ammonia ligase adenylyltransferase AMK58_RS04890 PF00579 tRNA synthetases class I (W and Y) AMK58_RS04895 PF03702 Anhydro-N-acetylmuramic acid kinase AMK58_RS04900 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMK58_RS04905 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS04910 PF02082 Transcriptional regulator AMK58_RS04915 PF00266 Aminotransferase class-V AMK58_RS04920 PF07743 HSCB C-terminal oligomerisation domain AMK58_RS04925 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK58_RS04945 PF00529 HlyD membrane-fusion protein of T1SS AMK58_RS04945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK58_RS04950 PF00005 ABC transporter AMK58_RS04950 PF00664 ABC transporter transmembrane region AMK58_RS04970 PF00106 short chain dehydrogenase AMK58_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS04975 PF03466 LysR substrate binding domain AMK58_RS04980 PF13847 Methyltransferase domain AMK58_RS04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04990 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04990 PF09308 LuxQ, periplasmic AMK58_RS04990 PF00072 Response regulator receiver domain AMK58_RS05000 PF00072 Response regulator receiver domain AMK58_RS05015 PF04891 NifQ AMK58_RS05025 PF01894 Uncharacterised protein family UPF0047 AMK58_RS05035 PF13406 Transglycosylase SLT domain AMK58_RS05055 PF00465 Iron-containing alcohol dehydrogenase AMK58_RS05075 PF13439 Glycosyltransferase Family 4 AMK58_RS05075 PF00534 Glycosyl transferases group 1 AMK58_RS05085 PF00583 Acetyltransferase (GNAT) family AMK58_RS05100 PF00206 Lyase AMK58_RS05100 PF10415 Fumarase C C-terminus AMK58_RS05115 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS05115 PF08448 PAS fold AMK58_RS05115 PF00563 EAL domain AMK58_RS05120 PF02222 ATP-grasp domain AMK58_RS05120 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMK58_RS05125 PF00731 AIR carboxylase AMK58_RS05135 PF00365 Phosphofructokinase AMK58_RS05145 PF13302 Acetyltransferase (GNAT) domain AMK58_RS05160 PF00460 Flagella basal body rod protein AMK58_RS05160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS05160 PF07559 Flagellar basal body protein FlaE AMK58_RS05165 PF00484 Carbonic anhydrase AMK58_RS05170 PF02441 Flavoprotein AMK58_RS05180 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS05180 PF16197 Ketoacyl-synthetase C-terminal extension AMK58_RS05180 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS05180 PF00550 Phosphopantetheine attachment site AMK58_RS05180 PF08659 KR domain AMK58_RS05180 PF00698 Acyl transferase domain AMK58_RS05180 PF14765 Polyketide synthase dehydratase AMK58_RS05215 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMK58_RS05215 PF03807 NADP oxidoreductase coenzyme F420-dependent AMK58_RS05225 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS05225 PF00501 AMP-binding enzyme AMK58_RS05230 PF13530 Sterol carrier protein domain AMK58_RS05230 PF17668 Acetyltransferase (GNAT) domain AMK58_RS05235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05235 PF08269 Cache domain AMK58_RS05255 PF08331 Domain of unknown function (DUF1730) AMK58_RS05260 PF14489 QueF-like protein AMK58_RS05265 PF01702 Queuine tRNA-ribosyltransferase AMK58_RS05270 PF02547 Queuosine biosynthesis protein AMK58_RS05275 PF03109 ABC1 family AMK58_RS05280 PF00672 HAMP domain AMK58_RS05280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05285 PF08031 Berberine and berberine like AMK58_RS05285 PF01565 FAD binding domain AMK58_RS05310 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS05310 PF00501 AMP-binding enzyme AMK58_RS05310 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS05320 PF04542 Sigma-70 region 2 AMK58_RS05320 PF08281 Sigma-70, region 4 AMK58_RS05350 PF01339 CheB methylesterase AMK58_RS05350 PF00072 Response regulator receiver domain AMK58_RS05370 PF04715 Anthranilate synthase component I, N terminal region AMK58_RS05370 PF00425 chorismate binding enzyme AMK58_RS05370 PF00117 Glutamine amidotransferase class-I AMK58_RS05375 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AMK58_RS05380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS05380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS05385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMK58_RS05390 PF02233 NAD(P) transhydrogenase beta subunit AMK58_RS05400 PF02548 Ketopantoate hydroxymethyltransferase AMK58_RS05405 PF01165 Ribosomal protein S21 AMK58_RS05410 PF01327 Polypeptide deformylase AMK58_RS05420 PF04993 TfoX N-terminal domain AMK58_RS05420 PF04994 TfoX C-terminal domain AMK58_RS05435 PF02511 Thymidylate synthase complementing protein AMK58_RS05460 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS05465 PF00005 ABC transporter AMK58_RS05470 PF00999 Sodium/hydrogen exchanger family AMK58_RS05470 PF02254 TrkA-N domain AMK58_RS05475 PF01883 Iron-sulfur cluster assembly protein AMK58_RS05475 PF10609 NUBPL iron-transfer P-loop NTPase AMK58_RS05480 PF12221 Bacterial membrane protein N terminal AMK58_RS05480 PF01145 SPFH domain / Band 7 family AMK58_RS05485 PF01145 SPFH domain / Band 7 family AMK58_RS05495 PF13180 PDZ domain AMK58_RS05515 PF00155 Aminotransferase class I and II AMK58_RS05520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS05520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS05520 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS05525 PF10369 Small subunit of acetolactate synthase AMK58_RS05530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMK58_RS05530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMK58_RS05535 PF01895 PhoU domain AMK58_RS05540 PF03350 Uncharacterized protein family, UPF0114 AMK58_RS05550 PF04085 rod shape-determining protein MreC AMK58_RS05560 PF03717 Penicillin-binding Protein dimerisation domain AMK58_RS05560 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS05565 PF08269 Cache domain AMK58_RS05565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05580 PF02608 ABC transporter substrate-binding protein PnrA-like AMK58_RS05585 PF00005 ABC transporter AMK58_RS05590 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS05595 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS05600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS05605 PF01048 Phosphorylase superfamily AMK58_RS05610 PF01791 DeoC/LacD family aldolase AMK58_RS05615 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMK58_RS05615 PF00591 Glycosyl transferase family, a/b domain AMK58_RS05615 PF02885 Glycosyl transferase family, helical bundle domain AMK58_RS05620 PF01593 Flavin containing amine oxidoreductase AMK58_RS05625 PF00892 EamA-like transporter family AMK58_RS05645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS05645 PF00005 ABC transporter AMK58_RS05650 PF00005 ABC transporter AMK58_RS05660 PF00654 Voltage gated chloride channel AMK58_RS05665 PF03976 Polyphosphate kinase 2 (PPK2) AMK58_RS05670 PF03976 Polyphosphate kinase 2 (PPK2) AMK58_RS05675 PF00128 Alpha amylase, catalytic domain AMK58_RS05675 PF11896 Domain of unknown function (DUF3416) AMK58_RS05685 PF00563 EAL domain AMK58_RS05685 PF01590 GAF domain AMK58_RS05685 PF00989 PAS fold AMK58_RS05685 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS05690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS05690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS05695 PF02586 SOS response associated peptidase (SRAP) AMK58_RS05705 PF00072 Response regulator receiver domain AMK58_RS05710 PF04226 Transglycosylase associated protein AMK58_RS05715 PF00834 Ribulose-phosphate 3 epimerase family AMK58_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS05720 PF03459 TOBE domain AMK58_RS05725 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS05725 PF00107 Zinc-binding dehydrogenase AMK58_RS05730 PF01638 HxlR-like helix-turn-helix AMK58_RS05740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS05740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS05750 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS05760 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS05775 PF00994 Probable molybdopterin binding domain AMK58_RS05780 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS05780 PF13746 4Fe-4S dicluster domain AMK58_RS05780 PF12801 4Fe-4S binding domain AMK58_RS05785 PF04304 Protein of unknown function (DUF454) AMK58_RS05790 PF09335 SNARE associated Golgi protein AMK58_RS05795 PF00989 PAS fold AMK58_RS05795 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS05800 PF00224 Pyruvate kinase, barrel domain AMK58_RS05800 PF02887 Pyruvate kinase, alpha/beta domain AMK58_RS05805 PF00416 Ribosomal protein S13/S18 AMK58_RS05810 PF00411 Ribosomal protein S11 AMK58_RS05815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMK58_RS05815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMK58_RS05815 PF01000 RNA polymerase Rpb3/RpoA insert domain AMK58_RS05820 PF01196 Ribosomal protein L17 AMK58_RS05825 PF09335 SNARE associated Golgi protein AMK58_RS05840 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS05840 PF12002 MgsA AAA+ ATPase C terminal AMK58_RS05840 PF16193 AAA C-terminal domain AMK58_RS05850 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMK58_RS05855 PF00849 RNA pseudouridylate synthase AMK58_RS05855 PF01479 S4 domain AMK58_RS05860 PF07729 FCD domain AMK58_RS05860 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS05865 PF03594 Benzoate membrane transport protein AMK58_RS05870 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS05890 PF01571 Aminomethyltransferase folate-binding domain AMK58_RS05895 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS05895 PF14760 Rnk N-terminus AMK58_RS05900 PF00005 ABC transporter AMK58_RS05905 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS05910 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS05915 PF02608 ABC transporter substrate-binding protein PnrA-like AMK58_RS05940 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS05940 PF00072 Response regulator receiver domain AMK58_RS05945 PF00156 Phosphoribosyl transferase domain AMK58_RS05950 PF10996 Beta-Casp domain AMK58_RS05950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMK58_RS05950 PF00753 Metallo-beta-lactamase superfamily AMK58_RS05960 PF00563 EAL domain AMK58_RS05960 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS05960 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS05965 PF00106 short chain dehydrogenase AMK58_RS05970 PF12867 DinB superfamily AMK58_RS05970 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS05975 PF10017 Histidine-specific methyltransferase, SAM-dependent AMK58_RS05985 PF00809 Pterin binding enzyme AMK58_RS05990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK58_RS05990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK58_RS05990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK58_RS05990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK58_RS05995 PF08543 Phosphomethylpyrimidine kinase AMK58_RS06000 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06000 PF00155 Aminotransferase class I and II AMK58_RS06015 PF01027 Inhibitor of apoptosis-promoting Bax1 AMK58_RS06020 PF10011 Predicted membrane protein (DUF2254) AMK58_RS06035 PF02567 Phenazine biosynthesis-like protein AMK58_RS06040 PF00171 Aldehyde dehydrogenase family AMK58_RS06040 PF01575 MaoC like domain AMK58_RS06045 PF00012 Hsp70 protein AMK58_RS06050 PF00120 Glutamine synthetase, catalytic domain AMK58_RS06050 PF03951 Glutamine synthetase, beta-Grasp domain AMK58_RS06055 PF00543 Nitrogen regulatory protein P-II AMK58_RS06070 PF03853 YjeF-related protein N-terminus AMK58_RS06070 PF01256 Carbohydrate kinase AMK58_RS06085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMK58_RS06085 PF05698 Bacterial trigger factor protein (TF) C-terminus AMK58_RS06085 PF05697 Bacterial trigger factor protein (TF) AMK58_RS06090 PF00574 Clp protease AMK58_RS06095 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS06095 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS06095 PF06689 ClpX C4-type zinc finger AMK58_RS06100 PF05362 Lon protease (S16) C-terminal proteolytic domain AMK58_RS06100 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS06100 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMK58_RS06105 PF00216 Bacterial DNA-binding protein AMK58_RS06120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMK58_RS06125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMK58_RS06130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMK58_RS06135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMK58_RS06145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK58_RS06145 PF10531 SLBB domain AMK58_RS06145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMK58_RS06150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK58_RS06150 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMK58_RS06150 PF00384 Molybdopterin oxidoreductase AMK58_RS06155 PF00146 NADH dehydrogenase AMK58_RS06160 PF12838 4Fe-4S dicluster domain AMK58_RS06165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMK58_RS06170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMK58_RS06175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMK58_RS06175 PF00361 Proton-conducting membrane transporter AMK58_RS06180 PF00361 Proton-conducting membrane transporter AMK58_RS06180 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMK58_RS06185 PF00361 Proton-conducting membrane transporter AMK58_RS06190 PF02237 Biotin protein ligase C terminal domain AMK58_RS06190 PF03099 Biotin/lipoate A/B protein ligase family AMK58_RS06195 PF03309 Type III pantothenate kinase AMK58_RS06200 PF12706 Beta-lactamase superfamily domain AMK58_RS06200 PF17770 Ribonuclease J C-terminal domain AMK58_RS06200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMK58_RS06215 PF00958 GMP synthase C terminal domain AMK58_RS06215 PF00117 Glutamine amidotransferase class-I AMK58_RS06215 PF13302 Acetyltransferase (GNAT) domain AMK58_RS06215 PF03352 Methyladenine glycosylase AMK58_RS06215 PF13673 Acetyltransferase (GNAT) domain AMK58_RS06230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK58_RS06230 PF03129 Anticodon binding domain AMK58_RS06235 PF12704 MacB-like periplasmic core domain AMK58_RS06235 PF02687 FtsX-like permease family AMK58_RS06240 PF00005 ABC transporter AMK58_RS06245 PF01738 Dienelactone hydrolase family AMK58_RS06250 PF00892 EamA-like transporter family AMK58_RS06260 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMK58_RS06260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMK58_RS06260 PF02811 PHP domain AMK58_RS06260 PF14579 Helix-hairpin-helix motif AMK58_RS06265 PF00318 Ribosomal protein S2 AMK58_RS06270 PF00889 Elongation factor TS AMK58_RS06275 PF00696 Amino acid kinase family AMK58_RS06280 PF01765 Ribosome recycling factor AMK58_RS06285 PF01255 Putative undecaprenyl diphosphate synthase AMK58_RS06295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMK58_RS06295 PF13288 DXP reductoisomerase C-terminal domain AMK58_RS06295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMK58_RS06300 PF02163 Peptidase family M50 AMK58_RS06300 PF17820 PDZ domain AMK58_RS06305 PF07244 Surface antigen variable number repeat AMK58_RS06305 PF01103 Surface antigen AMK58_RS06315 PF07977 FabA-like domain AMK58_RS06320 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS06320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMK58_RS06325 PF17930 LpxI N-terminal domain AMK58_RS06325 PF06230 LpxI C-terminal domain AMK58_RS06330 PF02684 Lipid-A-disaccharide synthetase AMK58_RS06335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS06345 PF03466 LysR substrate binding domain AMK58_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS06350 PF13417 Glutathione S-transferase, N-terminal domain AMK58_RS06360 PF00285 Citrate synthase, C-terminal domain AMK58_RS06365 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS06370 PF00753 Metallo-beta-lactamase superfamily AMK58_RS06370 PF13567 Domain of unknown function (DUF4131) AMK58_RS06370 PF03772 Competence protein AMK58_RS06375 PF01726 LexA DNA binding domain AMK58_RS06375 PF00717 Peptidase S24-like AMK58_RS06380 PF00994 Probable molybdopterin binding domain AMK58_RS06380 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS06380 PF03454 MoeA C-terminal region (domain IV) AMK58_RS06385 PF01967 MoaC family AMK58_RS06390 PF00583 Acetyltransferase (GNAT) family AMK58_RS06395 PF00218 Indole-3-glycerol phosphate synthase AMK58_RS06400 PF00591 Glycosyl transferase family, a/b domain AMK58_RS06400 PF02885 Glycosyl transferase family, helical bundle domain AMK58_RS06405 PF00117 Glutamine amidotransferase class-I AMK58_RS06430 PF04715 Anthranilate synthase component I, N terminal region AMK58_RS06430 PF00425 chorismate binding enzyme AMK58_RS06440 PF00121 Triosephosphate isomerase AMK58_RS06445 PF03840 Preprotein translocase SecG subunit AMK58_RS06450 PF06418 CTP synthase N-terminus AMK58_RS06450 PF00117 Glutamine amidotransferase class-I AMK58_RS06455 PF01738 Dienelactone hydrolase family AMK58_RS06460 PF00793 DAHP synthetase I family AMK58_RS06470 PF13186 Iron-sulfur cluster-binding domain AMK58_RS06470 PF04055 Radical SAM superfamily AMK58_RS06475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMK58_RS06480 PF03070 TENA/THI-4/PQQC family AMK58_RS06485 PF12706 Beta-lactamase superfamily domain AMK58_RS06495 PF03952 Enolase, N-terminal domain AMK58_RS06495 PF00113 Enolase, C-terminal TIM barrel domain AMK58_RS06505 PF01171 PP-loop family AMK58_RS06510 PF17862 AAA+ lid domain AMK58_RS06510 PF06480 FtsH Extracellular AMK58_RS06510 PF01434 Peptidase family M41 AMK58_RS06510 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS06525 PF08534 Redoxin AMK58_RS06530 PF00221 Aromatic amino acid lyase AMK58_RS06535 PF00664 ABC transporter transmembrane region AMK58_RS06535 PF00005 ABC transporter AMK58_RS06540 PF00529 HlyD membrane-fusion protein of T1SS AMK58_RS06540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK58_RS06545 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS06545 PF00072 Response regulator receiver domain AMK58_RS06560 PF12697 Alpha/beta hydrolase family AMK58_RS06565 PF03023 Lipid II flippase MurJ AMK58_RS06575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMK58_RS06585 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS06590 PF00155 Aminotransferase class I and II AMK58_RS06605 PF00005 ABC transporter AMK58_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS06620 PF03960 ArsC family AMK58_RS06625 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06625 PF13188 PAS domain AMK58_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06625 PF08448 PAS fold AMK58_RS06625 PF00072 Response regulator receiver domain AMK58_RS06630 PF00072 Response regulator receiver domain AMK58_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06635 PF08448 PAS fold AMK58_RS06635 PF13188 PAS domain AMK58_RS06635 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06635 PF00072 Response regulator receiver domain AMK58_RS06640 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS06640 PF00072 Response regulator receiver domain AMK58_RS06645 PF17200 Single Cache domain 2 AMK58_RS06645 PF00672 HAMP domain AMK58_RS06645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS06655 PF00156 Phosphoribosyl transferase domain AMK58_RS06655 PF01738 Dienelactone hydrolase family AMK58_RS06675 PF17149 Periplasmic sensor domain found in signal transduction proteins AMK58_RS06675 PF00672 HAMP domain AMK58_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06675 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06675 PF01627 Hpt domain AMK58_RS06675 PF00072 Response regulator receiver domain AMK58_RS06690 PF03091 CutA1 divalent ion tolerance protein AMK58_RS06705 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS06710 PF13380 CoA binding domain AMK58_RS06715 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS06725 PF00572 Ribosomal protein L13 AMK58_RS06730 PF00380 Ribosomal protein S9/S16 AMK58_RS06735 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS06735 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS06740 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS06745 PF00691 OmpA family AMK58_RS06750 PF00561 alpha/beta hydrolase fold AMK58_RS06750 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMK58_RS06760 PF01047 MarR family AMK58_RS06765 PF07690 Major Facilitator Superfamily AMK58_RS06775 PF00155 Aminotransferase class I and II AMK58_RS06780 PF03447 Homoserine dehydrogenase, NAD binding domain AMK58_RS06780 PF00742 Homoserine dehydrogenase AMK58_RS06780 PF01842 ACT domain AMK58_RS06785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMK58_RS06790 PF00465 Iron-containing alcohol dehydrogenase AMK58_RS06795 PF01368 DHH family AMK58_RS06795 PF02272 DHHA1 domain AMK58_RS06795 PF17768 RecJ OB domain AMK58_RS06795 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMK58_RS06805 PF04851 Type III restriction enzyme, res subunit AMK58_RS06805 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AMK58_RS06805 PF08463 EcoEI R protein C-terminal AMK58_RS06805 PF00271 Helicase conserved C-terminal domain AMK58_RS06810 PF02384 N-6 DNA Methylase AMK58_RS06810 PF12161 HsdM N-terminal domain AMK58_RS06815 PF01420 Type I restriction modification DNA specificity domain AMK58_RS06860 PF00248 Aldo/keto reductase family AMK58_RS06870 PF07690 Major Facilitator Superfamily AMK58_RS06875 PF00850 Histone deacetylase domain AMK58_RS06885 PF02558 Ketopantoate reductase PanE/ApbA AMK58_RS06885 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMK58_RS06890 PF00571 CBS domain AMK58_RS06895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS06895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS06900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMK58_RS06905 PF02233 NAD(P) transhydrogenase beta subunit AMK58_RS06910 PF00571 CBS domain AMK58_RS06915 PF07729 FCD domain AMK58_RS06915 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06920 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS06920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS06920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS06925 PF02515 CoA-transferase family III AMK58_RS06930 PF08442 ATP-grasp domain AMK58_RS06930 PF00549 CoA-ligase AMK58_RS06935 PF02629 CoA binding domain AMK58_RS06935 PF00549 CoA-ligase AMK58_RS06940 PF07690 Major Facilitator Superfamily AMK58_RS06945 PF07690 Major Facilitator Superfamily AMK58_RS06955 PF13667 ThiC-associated domain AMK58_RS06955 PF01964 Radical SAM ThiC family AMK58_RS06960 PF07690 Major Facilitator Superfamily AMK58_RS06965 PF13660 Domain of unknown function (DUF4147) AMK58_RS06965 PF05161 MOFRL family AMK58_RS06970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS06970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS06975 PF01261 Xylose isomerase-like TIM barrel AMK58_RS06980 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS06980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS06980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS06985 PF02581 Thiamine monophosphate synthase AMK58_RS06985 PF02110 Hydroxyethylthiazole kinase family AMK58_RS06990 PF07729 FCD domain AMK58_RS06990 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06995 PF02887 Pyruvate kinase, alpha/beta domain AMK58_RS06995 PF00224 Pyruvate kinase, barrel domain AMK58_RS07005 PF02896 PEP-utilising enzyme, TIM barrel domain AMK58_RS07005 PF00391 PEP-utilising enzyme, mobile domain AMK58_RS07005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMK58_RS07020 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS07030 PF00158 Sigma-54 interaction domain AMK58_RS07030 PF18024 Helix-turn-helix domain AMK58_RS07035 PF01266 FAD dependent oxidoreductase AMK58_RS07045 PF01965 DJ-1/PfpI family AMK58_RS07050 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07050 PF00072 Response regulator receiver domain AMK58_RS07055 PF00072 Response regulator receiver domain AMK58_RS07055 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07060 PF00941 FAD binding domain in molybdopterin dehydrogenase AMK58_RS07060 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS07065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07070 PF01774 UreD urease accessory protein AMK58_RS07075 PF00547 Urease, gamma subunit AMK58_RS07080 PF00699 Urease beta subunit AMK58_RS07085 PF01979 Amidohydrolase family AMK58_RS07085 PF00449 Urease alpha-subunit, N-terminal domain AMK58_RS07090 PF01177 Asp/Glu/Hydantoin racemase AMK58_RS07095 PF02814 UreE urease accessory protein, N-terminal domain AMK58_RS07095 PF05194 UreE urease accessory protein, C-terminal domain AMK58_RS07100 PF01730 UreF AMK58_RS07105 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS07110 PF09557 Domain of unknown function (DUF2382) AMK58_RS07110 PF05239 PRC-barrel domain AMK58_RS07135 PF01022 Bacterial regulatory protein, arsR family AMK58_RS07160 PF00535 Glycosyl transferase family 2 AMK58_RS07165 PF01381 Helix-turn-helix AMK58_RS07185 PF00795 Carbon-nitrogen hydrolase AMK58_RS07190 PF01047 MarR family AMK58_RS07200 PF01895 PhoU domain AMK58_RS07215 PF13180 PDZ domain AMK58_RS07220 PF00535 Glycosyl transferase family 2 AMK58_RS07240 PF00480 ROK family AMK58_RS07250 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS07255 PF11862 Domain of unknown function (DUF3382) AMK58_RS07255 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS07260 PF00005 ABC transporter AMK58_RS07260 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS07265 PF00005 ABC transporter AMK58_RS07275 PF13458 Periplasmic binding protein AMK58_RS07290 PF00691 OmpA family AMK58_RS07295 PF00072 Response regulator receiver domain AMK58_RS07295 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07300 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS07300 PF01627 Hpt domain AMK58_RS07300 PF00072 Response regulator receiver domain AMK58_RS07300 PF00672 HAMP domain AMK58_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS07305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS07305 PF10371 Domain of unknown function AMK58_RS07305 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMK58_RS07305 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMK58_RS07305 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMK58_RS07315 PF00849 RNA pseudouridylate synthase AMK58_RS07325 PF13537 Glutamine amidotransferase domain AMK58_RS07325 PF00156 Phosphoribosyl transferase domain AMK58_RS07335 PF06745 KaiC AMK58_RS07335 PF18073 Rubredoxin metal binding domain AMK58_RS07340 PF00557 Metallopeptidase family M24 AMK58_RS07355 PF00005 ABC transporter AMK58_RS07360 PF02405 Permease MlaE AMK58_RS07365 PF00842 Alanine racemase, C-terminal domain AMK58_RS07365 PF01168 Alanine racemase, N-terminal domain AMK58_RS07370 PF03796 DnaB-like helicase C terminal domain AMK58_RS07370 PF00772 DnaB-like helicase N terminal domain AMK58_RS07380 PF01281 Ribosomal protein L9, N-terminal domain AMK58_RS07380 PF03948 Ribosomal protein L9, C-terminal domain AMK58_RS07390 PF01084 Ribosomal protein S18 AMK58_RS07395 PF01250 Ribosomal protein S6 AMK58_RS07400 PF00698 Acyl transferase domain AMK58_RS07410 PF00550 Phosphopantetheine attachment site AMK58_RS07415 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS07415 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS07420 PF02618 YceG-like family AMK58_RS07430 PF01464 Transglycosylase SLT domain AMK58_RS07435 PF00701 Dihydrodipicolinate synthetase family AMK58_RS07440 PF01668 SmpB protein AMK58_RS07445 PF08468 Methyltransferase small domain N-terminal AMK58_RS07445 PF05175 Methyltransferase small domain AMK58_RS07455 PF01161 Phosphatidylethanolamine-binding protein AMK58_RS07460 PF00490 Delta-aminolevulinic acid dehydratase AMK58_RS07465 PF00149 Calcineurin-like phosphoesterase AMK58_RS07470 PF00781 Diacylglycerol kinase catalytic domain AMK58_RS07475 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS07480 PF12802 MarR family AMK58_RS07485 PF00005 ABC transporter AMK58_RS07485 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS07490 PF00005 ABC transporter AMK58_RS07500 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS07515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS07515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS07525 PF00149 Calcineurin-like phosphoesterase AMK58_RS07525 PF02872 5'-nucleotidase, C-terminal domain AMK58_RS07530 PF00117 Glutamine amidotransferase class-I AMK58_RS07535 PF02348 Cytidylyltransferase AMK58_RS07540 PF13478 XdhC Rossmann domain AMK58_RS07540 PF02625 XdhC and CoxI family AMK58_RS07555 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS07555 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS07555 PF17871 AAA lid domain AMK58_RS07555 PF02861 Clp amino terminal domain, pathogenicity island component AMK58_RS07555 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS07560 PF00941 FAD binding domain in molybdopterin dehydrogenase AMK58_RS07560 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07565 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07565 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS07570 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK58_RS07570 PF01799 [2Fe-2S] binding domain AMK58_RS07575 PF16868 NMT1-like family AMK58_RS07605 PF00850 Histone deacetylase domain AMK58_RS07650 PF01502 Phosphoribosyl-AMP cyclohydrolase AMK58_RS07655 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS07660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07675 PF00005 ABC transporter AMK58_RS07680 PF00155 Aminotransferase class I and II AMK58_RS07700 PF00581 Rhodanese-like domain AMK58_RS07705 PF02272 DHHA1 domain AMK58_RS07705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS07705 PF01411 tRNA synthetases class II (A) AMK58_RS07710 PF00571 CBS domain AMK58_RS07710 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS07715 PF00293 NUDIX domain AMK58_RS07720 PF00595 PDZ domain AMK58_RS07720 PF13180 PDZ domain AMK58_RS07755 PF02321 Outer membrane efflux protein AMK58_RS07765 PF08264 Anticodon-binding domain of tRNA AMK58_RS07765 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS07765 PF10458 Valyl tRNA synthetase tRNA binding arm AMK58_RS07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS07770 PF00672 HAMP domain AMK58_RS07780 PF05036 Sporulation related domain AMK58_RS07780 PF03330 Lytic transglycolase AMK58_RS07785 PF00768 D-alanyl-D-alanine carboxypeptidase AMK58_RS07785 PF07943 Penicillin-binding protein 5, C-terminal domain AMK58_RS07790 PF02223 Thymidylate kinase AMK58_RS07795 PF09115 DNA polymerase III, delta subunit, C terminal AMK58_RS07800 PF09334 tRNA synthetases class I (M) AMK58_RS07800 PF08264 Anticodon-binding domain of tRNA AMK58_RS07805 PF01026 TatD related DNase AMK58_RS07810 PF03099 Biotin/lipoate A/B protein ligase family AMK58_RS07810 PF12706 Beta-lactamase superfamily domain AMK58_RS07835 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMK58_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07850 PF08402 TOBE domain AMK58_RS07850 PF00005 ABC transporter AMK58_RS07855 PF13416 Bacterial extracellular solute-binding protein AMK58_RS07860 PF00120 Glutamine synthetase, catalytic domain AMK58_RS07865 PF01266 FAD dependent oxidoreductase AMK58_RS07895 PF03741 Integral membrane protein TerC family AMK58_RS07900 PF00216 Bacterial DNA-binding protein AMK58_RS07905 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS07915 PF04545 Sigma-70, region 4 AMK58_RS07915 PF04542 Sigma-70 region 2 AMK58_RS07915 PF00140 Sigma-70 factor, region 1.2 AMK58_RS07940 PF01810 LysE type translocator AMK58_RS07950 PF02391 MoaE protein AMK58_RS07955 PF02597 ThiS family AMK58_RS07960 PF03454 MoeA C-terminal region (domain IV) AMK58_RS07960 PF00994 Probable molybdopterin binding domain AMK58_RS07960 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS07965 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AMK58_RS07970 PF01066 CDP-alcohol phosphatidyltransferase AMK58_RS07975 PF12826 Helix-hairpin-helix motif AMK58_RS07975 PF02151 UvrB/uvrC motif AMK58_RS07975 PF08459 UvrC Helix-hairpin-helix N-terminal AMK58_RS07975 PF01541 GIY-YIG catalytic domain AMK58_RS08020 PF00550 Phosphopantetheine attachment site AMK58_RS08020 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08020 PF00501 AMP-binding enzyme AMK58_RS08025 PF05681 Fumarate hydratase (Fumerase) AMK58_RS08025 PF05683 Fumarase C-terminus AMK58_RS08030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMK58_RS08030 PF01926 50S ribosome-binding GTPase AMK58_RS08050 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08050 PF00072 Response regulator receiver domain AMK58_RS08060 PF00072 Response regulator receiver domain AMK58_RS08060 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08075 PF02705 K+ potassium transporter AMK58_RS08085 PF00672 HAMP domain AMK58_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08085 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08085 PF01627 Hpt domain AMK58_RS08085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS08085 PF00072 Response regulator receiver domain AMK58_RS08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS08100 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS08105 PF00155 Aminotransferase class I and II AMK58_RS08110 PF03186 CobD/Cbib protein AMK58_RS08115 PF16653 Saccharopine dehydrogenase C-terminal domain AMK58_RS08115 PF03435 Saccharopine dehydrogenase NADP binding domain AMK58_RS08130 PF03079 ARD/ARD' family AMK58_RS08135 PF07690 Major Facilitator Superfamily AMK58_RS08150 PF13411 MerR HTH family regulatory protein AMK58_RS08155 PF00501 AMP-binding enzyme AMK58_RS08155 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08175 PF00005 ABC transporter AMK58_RS08185 PF00005 ABC transporter AMK58_RS08190 PF00009 Elongation factor Tu GTP binding domain AMK58_RS08195 PF01507 Phosphoadenosine phosphosulfate reductase family AMK58_RS08200 PF01507 Phosphoadenosine phosphosulfate reductase family AMK58_RS08205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK58_RS08205 PF10414 Sirohaem synthase dimerisation region AMK58_RS08205 PF14824 Sirohaem biosynthesis protein central AMK58_RS08210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK58_RS08220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMK58_RS08220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMK58_RS08235 PF02254 TrkA-N domain AMK58_RS08235 PF00999 Sodium/hydrogen exchanger family AMK58_RS08250 PF13411 MerR HTH family regulatory protein AMK58_RS08255 PF00216 Bacterial DNA-binding protein AMK58_RS08260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMK58_RS08260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMK58_RS08265 PF02504 Fatty acid synthesis protein AMK58_RS08270 PF01783 Ribosomal L32p protein family AMK58_RS08290 PF03030 Inorganic H+ pyrophosphatase AMK58_RS08300 PF02769 AIR synthase related protein, C-terminal domain AMK58_RS08300 PF00586 AIR synthase related protein, N-terminal domain AMK58_RS08305 PF01029 NusB family AMK58_RS08310 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMK58_RS08315 PF00925 GTP cyclohydrolase II AMK58_RS08315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMK58_RS08320 PF00677 Lumazine binding domain AMK58_RS08325 PF01872 RibD C-terminal domain AMK58_RS08325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS08330 PF03477 ATP cone domain AMK58_RS08335 PF00464 Serine hydroxymethyltransferase AMK58_RS08340 PF02502 Ribose/Galactose Isomerase AMK58_RS08345 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS08360 PF05974 Domain of unknown function (DUF892) AMK58_RS08380 PF13673 Acetyltransferase (GNAT) domain AMK58_RS08390 PF04679 ATP dependent DNA ligase C terminal region AMK58_RS08390 PF04675 DNA ligase N terminus AMK58_RS08390 PF01068 ATP dependent DNA ligase domain AMK58_RS08400 PF04227 Indigoidine synthase A like protein AMK58_RS08410 PF01048 Phosphorylase superfamily AMK58_RS08430 PF03144 Elongation factor Tu domain 2 AMK58_RS08430 PF00009 Elongation factor Tu GTP binding domain AMK58_RS08430 PF00679 Elongation factor G C-terminus AMK58_RS08455 PF00325 Bacterial regulatory proteins, crp family AMK58_RS08455 PF00027 Cyclic nucleotide-binding domain AMK58_RS08465 PF00027 Cyclic nucleotide-binding domain AMK58_RS08465 PF13545 Crp-like helix-turn-helix domain AMK58_RS08475 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AMK58_RS08480 PF00195 Chalcone and stilbene synthases, N-terminal domain AMK58_RS08480 PF02797 Chalcone and stilbene synthases, C-terminal domain AMK58_RS08495 PF00872 Transposase, Mutator family AMK58_RS08500 PF17191 RecG wedge domain AMK58_RS08500 PF00270 DEAD/DEAH box helicase AMK58_RS08500 PF00271 Helicase conserved C-terminal domain AMK58_RS08505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS08505 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMK58_RS08510 PF12557 Cob(I)alamin adenosyltransferase N terminal AMK58_RS08510 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMK58_RS08515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMK58_RS08545 PF00472 RF-1 domain AMK58_RS08565 PF02559 CarD-like/TRCF domain AMK58_RS08565 PF00270 DEAD/DEAH box helicase AMK58_RS08565 PF00271 Helicase conserved C-terminal domain AMK58_RS08565 PF03461 TRCF domain AMK58_RS08565 PF17757 UvrB interaction domain AMK58_RS08575 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS08585 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS08585 PF12867 DinB superfamily AMK58_RS08605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS08605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK58_RS08610 PF05067 Manganese containing catalase AMK58_RS08615 PF07690 Major Facilitator Superfamily AMK58_RS08620 PF01474 Class-II DAHP synthetase family AMK58_RS08630 PF00171 Aldehyde dehydrogenase family AMK58_RS08635 PF02569 Pantoate-beta-alanine ligase AMK58_RS08665 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS08670 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS08670 PF14602 Hexapeptide repeat of succinyl-transferase AMK58_RS08670 PF12804 MobA-like NTP transferase domain AMK58_RS08675 PF01380 SIS domain AMK58_RS08680 PF05951 Bacterial protein of unknown function (DUF882) AMK58_RS08690 PF00301 Rubredoxin AMK58_RS08705 PF01734 Patatin-like phospholipase AMK58_RS08710 PF18125 RlmM ferredoxin-like domain AMK58_RS08710 PF01728 FtsJ-like methyltransferase AMK58_RS08730 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08730 PF00989 PAS fold AMK58_RS08735 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08735 PF00072 Response regulator receiver domain AMK58_RS08740 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08740 PF00989 PAS fold AMK58_RS08745 PF03480 Bacterial extracellular solute-binding protein, family 7 AMK58_RS08750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMK58_RS08755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMK58_RS08760 PF03831 PhnA domain AMK58_RS08760 PF08274 PhnA Zinc-Ribbon AMK58_RS08765 PF08269 Cache domain AMK58_RS08765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS08775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS08775 PF00384 Molybdopterin oxidoreductase AMK58_RS08775 PF01568 Molydopterin dinucleotide binding domain AMK58_RS08780 PF03060 Nitronate monooxygenase AMK58_RS08785 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS08800 PF02607 B12 binding domain AMK58_RS08800 PF02574 Homocysteine S-methyltransferase AMK58_RS08800 PF00809 Pterin binding enzyme AMK58_RS08800 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMK58_RS08800 PF02310 B12 binding domain AMK58_RS08810 PF02219 Methylenetetrahydrofolate reductase AMK58_RS08815 PF03551 Transcriptional regulator PadR-like family AMK58_RS08815 PF13847 Methyltransferase domain AMK58_RS08820 PF04333 MlaA lipoprotein AMK58_RS08835 PF12848 ABC transporter AMK58_RS08835 PF00005 ABC transporter AMK58_RS08840 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMK58_RS08845 PF00929 Exonuclease AMK58_RS08865 PF00210 Ferritin-like domain AMK58_RS08870 PF02446 4-alpha-glucanotransferase AMK58_RS08875 PF00072 Response regulator receiver domain AMK58_RS08875 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS08880 PF00128 Alpha amylase, catalytic domain AMK58_RS08880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS08885 PF00128 Alpha amylase, catalytic domain AMK58_RS08885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS08885 PF02806 Alpha amylase, C-terminal all-beta domain AMK58_RS08890 PF16657 Maltogenic Amylase, C-terminal domain AMK58_RS08890 PF00128 Alpha amylase, catalytic domain AMK58_RS08905 PF00459 Inositol monophosphatase family AMK58_RS08910 PF04305 Protein of unknown function (DUF455) AMK58_RS08925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK58_RS08925 PF02770 Acyl-CoA dehydrogenase, middle domain AMK58_RS08925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK58_RS08935 PF00501 AMP-binding enzyme AMK58_RS08935 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08940 PF00325 Bacterial regulatory proteins, crp family AMK58_RS08940 PF00027 Cyclic nucleotide-binding domain AMK58_RS08945 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS08950 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS08970 PF00691 OmpA family AMK58_RS08970 PF01389 OmpA-like transmembrane domain AMK58_RS08990 PF00027 Cyclic nucleotide-binding domain AMK58_RS08990 PF13545 Crp-like helix-turn-helix domain AMK58_RS09000 PF12802 MarR family AMK58_RS09005 PF00561 alpha/beta hydrolase fold AMK58_RS09020 PF01209 ubiE/COQ5 methyltransferase family AMK58_RS09035 PF00271 Helicase conserved C-terminal domain AMK58_RS09035 PF08494 DEAD/H associated AMK58_RS09035 PF00270 DEAD/DEAH box helicase AMK58_RS09045 PF02469 Fasciclin domain AMK58_RS09050 PF03441 FAD binding domain of DNA photolyase AMK58_RS09050 PF00875 DNA photolyase AMK58_RS09060 PF01475 Ferric uptake regulator family AMK58_RS09065 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS09065 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK58_RS09075 PF00535 Glycosyl transferase family 2 AMK58_RS09080 PF03600 Citrate transporter AMK58_RS09085 PF12706 Beta-lactamase superfamily domain AMK58_RS09095 PF12729 Four helix bundle sensory module for signal transduction AMK58_RS09095 PF00672 HAMP domain AMK58_RS09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS09100 PF00672 HAMP domain AMK58_RS09100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS09100 PF17200 Single Cache domain 2 AMK58_RS09105 PF16916 Dimerisation domain of Zinc Transporter AMK58_RS09105 PF01545 Cation efflux family AMK58_RS09110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMK58_RS09110 PF01243 Pyridoxamine 5'-phosphate oxidase AMK58_RS09115 PF16998 17 kDa outer membrane surface antigen AMK58_RS09115 PF05433 Glycine zipper 2TM domain AMK58_RS09120 PF00684 DnaJ central domain AMK58_RS09120 PF01556 DnaJ C terminal domain AMK58_RS09120 PF00226 DnaJ domain AMK58_RS09125 PF17862 AAA+ lid domain AMK58_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS09125 PF01434 Peptidase family M41 AMK58_RS09125 PF06480 FtsH Extracellular AMK58_RS09140 PF00072 Response regulator receiver domain AMK58_RS09140 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09145 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09145 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS09150 PF09345 Domain of unknown function (DUF1987) AMK58_RS09160 PF11849 Domain of unknown function (DUF3369) AMK58_RS09185 PF00893 Small Multidrug Resistance protein AMK58_RS09190 PF00106 short chain dehydrogenase AMK58_RS09195 PF02566 OsmC-like protein AMK58_RS09205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK58_RS09215 PF00892 EamA-like transporter family AMK58_RS09220 PF00733 Asparagine synthase AMK58_RS09220 PF13537 Glutamine amidotransferase domain AMK58_RS09230 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS09235 PF13477 Glycosyl transferase 4-like AMK58_RS09235 PF00534 Glycosyl transferases group 1 AMK58_RS09240 PF00953 Glycosyl transferase family 4 AMK58_RS09245 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS09250 PF02719 Polysaccharide biosynthesis protein AMK58_RS09260 PF00691 OmpA family AMK58_RS09265 PF07676 WD40-like Beta Propeller Repeat AMK58_RS09265 PF04052 TolB amino-terminal domain AMK58_RS09275 PF02472 Biopolymer transport protein ExbD/TolR AMK58_RS09280 PF01618 MotA/TolQ/ExbB proton channel family AMK58_RS09285 PF03061 Thioesterase superfamily AMK58_RS09290 PF17864 RuvB AAA lid domain AMK58_RS09290 PF05491 RuvB C-terminal winged helix domain AMK58_RS09290 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMK58_RS09295 PF07499 RuvA, C-terminal domain AMK58_RS09295 PF01330 RuvA N terminal domain AMK58_RS09300 PF02075 Crossover junction endodeoxyribonuclease RuvC AMK58_RS09305 PF01709 Transcriptional regulator AMK58_RS09310 PF13277 YmdB-like protein AMK58_RS09315 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMK58_RS09335 PF02780 Transketolase, C-terminal domain AMK58_RS09335 PF00456 Transketolase, thiamine diphosphate binding domain AMK58_RS09335 PF02779 Transketolase, pyrimidine binding domain AMK58_RS09340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMK58_RS09340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMK58_RS09360 PF01791 DeoC/LacD family aldolase AMK58_RS09365 PF02581 Thiamine monophosphate synthase AMK58_RS09370 PF01925 Sulfite exporter TauE/SafE AMK58_RS09375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMK58_RS09380 PF00107 Zinc-binding dehydrogenase AMK58_RS09380 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS09385 PF00152 tRNA synthetases class II (D, K and N) AMK58_RS09390 PF01132 Elongation factor P (EF-P) OB domain AMK58_RS09390 PF09285 Elongation factor P, C-terminal AMK58_RS09390 PF08207 Elongation factor P (EF-P) KOW-like domain AMK58_RS09395 PF00459 Inositol monophosphatase family AMK58_RS09410 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMK58_RS09410 PF00691 OmpA family AMK58_RS09415 PF00266 Aminotransferase class-V AMK58_RS09420 PF02347 Glycine cleavage system P-protein AMK58_RS09425 PF01597 Glycine cleavage H-protein AMK58_RS09430 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK58_RS09430 PF01571 Aminomethyltransferase folate-binding domain AMK58_RS09445 PF02401 LytB protein AMK58_RS09450 PF01636 Phosphotransferase enzyme family AMK58_RS09455 PF00075 RNase H AMK58_RS09460 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS09460 PF00501 AMP-binding enzyme AMK58_RS09465 PF08534 Redoxin AMK58_RS09470 PF11412 Disulphide bond corrector protein DsbC AMK58_RS09470 PF02683 Cytochrome C biogenesis protein transmembrane region AMK58_RS09475 PF02622 Uncharacterized ACR, COG1678 AMK58_RS09485 PF13302 Acetyltransferase (GNAT) domain AMK58_RS09490 PF05193 Peptidase M16 inactive domain AMK58_RS09490 PF00675 Insulinase (Peptidase family M16) AMK58_RS09495 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS09495 PF14821 Threonine synthase N terminus AMK58_RS09500 PF00150 Cellulase (glycosyl hydrolase family 5) AMK58_RS09505 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AMK58_RS09510 PF02104 SURF1 family AMK58_RS09520 PF00510 Cytochrome c oxidase subunit III AMK58_RS09525 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMK58_RS09530 PF01040 UbiA prenyltransferase family AMK58_RS09535 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK58_RS09540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMK58_RS09540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMK58_RS09550 PF01523 Putative modulator of DNA gyrase AMK58_RS09555 PF01909 Nucleotidyltransferase domain AMK58_RS09555 PF08335 GlnD PII-uridylyltransferase AMK58_RS09555 PF01966 HD domain AMK58_RS09555 PF01842 ACT domain AMK58_RS09560 PF06082 Exopolysaccharide biosynthesis protein YbjH AMK58_RS09570 PF07043 Protein of unknown function (DUF1328) AMK58_RS09575 PF08281 Sigma-70, region 4 AMK58_RS09575 PF04542 Sigma-70 region 2 AMK58_RS09580 PF01464 Transglycosylase SLT domain AMK58_RS09585 PF17843 MycE methyltransferase N-terminal AMK58_RS09600 PF01212 Beta-eliminating lyase AMK58_RS09610 PF00849 RNA pseudouridylate synthase AMK58_RS09615 PF00140 Sigma-70 factor, region 1.2 AMK58_RS09615 PF04545 Sigma-70, region 4 AMK58_RS09615 PF04542 Sigma-70 region 2 AMK58_RS09625 PF00069 Protein kinase domain AMK58_RS09630 PF00709 Adenylosuccinate synthetase AMK58_RS09635 PF13393 Histidyl-tRNA synthetase AMK58_RS09645 PF02386 Cation transport protein AMK58_RS09660 PF06463 Molybdenum Cofactor Synthesis C AMK58_RS09660 PF04055 Radical SAM superfamily AMK58_RS09665 PF03631 Virulence factor BrkB AMK58_RS09680 PF01264 Chorismate synthase AMK58_RS09690 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS09690 PF00072 Response regulator receiver domain AMK58_RS09700 PF01343 Peptidase family S49 AMK58_RS09710 PF01339 CheB methylesterase AMK58_RS09710 PF01739 CheR methyltransferase, SAM binding domain AMK58_RS09710 PF03705 CheR methyltransferase, all-alpha domain AMK58_RS09710 PF08448 PAS fold AMK58_RS09715 PF00989 PAS fold AMK58_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09715 PF01627 Hpt domain AMK58_RS09715 PF00072 Response regulator receiver domain AMK58_RS09715 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMK58_RS09715 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09725 PF03649 Uncharacterised protein family (UPF0014) AMK58_RS09730 PF00005 ABC transporter AMK58_RS09730 PF12704 MacB-like periplasmic core domain AMK58_RS09730 PF02687 FtsX-like permease family AMK58_RS09735 PF07690 Major Facilitator Superfamily AMK58_RS09740 PF01594 AI-2E family transporter AMK58_RS09745 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09745 PF00672 HAMP domain AMK58_RS09750 PF00072 Response regulator receiver domain AMK58_RS09750 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS09755 PF13180 PDZ domain AMK58_RS09765 PF14492 Elongation Factor G, domain II AMK58_RS09765 PF03764 Elongation factor G, domain IV AMK58_RS09765 PF00009 Elongation factor Tu GTP binding domain AMK58_RS09765 PF03144 Elongation factor Tu domain 2 AMK58_RS09765 PF00679 Elongation factor G C-terminus AMK58_RS09770 PF01042 Endoribonuclease L-PSP AMK58_RS09780 PF01751 Toprim domain AMK58_RS09780 PF01131 DNA topoisomerase AMK58_RS09800 PF07238 PilZ domain AMK58_RS09800 PF00535 Glycosyl transferase family 2 AMK58_RS09800 PF03552 Cellulose synthase AMK58_RS09810 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS09810 PF00633 Helix-hairpin-helix motif AMK58_RS09810 PF10576 Iron-sulfur binding domain of endonuclease III AMK58_RS09820 PF00176 SNF2 family N-terminal domain AMK58_RS09820 PF00271 Helicase conserved C-terminal domain AMK58_RS09820 PF04434 SWIM zinc finger AMK58_RS09840 PF00583 Acetyltransferase (GNAT) family AMK58_RS09840 PF00696 Amino acid kinase family AMK58_RS09850 PF04545 Sigma-70, region 4 AMK58_RS09850 PF04539 Sigma-70 region 3 AMK58_RS09850 PF04542 Sigma-70 region 2 AMK58_RS09850 PF00140 Sigma-70 factor, region 1.2 AMK58_RS09850 PF03979 Sigma-70 factor, region 1.1 AMK58_RS09850 PF04546 Sigma-70, non-essential region AMK58_RS09855 PF10410 DnaB-helicase binding domain of primase AMK58_RS09855 PF13662 Toprim domain AMK58_RS09855 PF08278 DNA primase DnaG DnaB-binding AMK58_RS09855 PF01807 CHC2 zinc finger AMK58_RS09855 PF08275 DNA primase catalytic core, N-terminal domain AMK58_RS09865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMK58_RS09865 PF00117 Glutamine amidotransferase class-I AMK58_RS09870 PF00072 Response regulator receiver domain AMK58_RS09870 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09870 PF13188 PAS domain AMK58_RS09870 PF08448 PAS fold AMK58_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS09885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK58_RS09890 PF03960 ArsC family AMK58_RS09895 PF05175 Methyltransferase small domain AMK58_RS09900 PF00583 Acetyltransferase (GNAT) family AMK58_RS09900 PF00814 Glycoprotease family AMK58_RS09910 PF01066 CDP-alcohol phosphatidyltransferase AMK58_RS09915 PF02666 Phosphatidylserine decarboxylase AMK58_RS09935 PF03641 Possible lysine decarboxylase AMK58_RS09940 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS09950 PF06055 Exopolysaccharide synthesis, ExoD AMK58_RS09965 PF04542 Sigma-70 region 2 AMK58_RS09965 PF08281 Sigma-70, region 4 AMK58_RS09970 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS09970 PF18324 Hypothetical protein TT1725 AMK58_RS10000 PF13291 ACT domain AMK58_RS10000 PF02824 TGS domain AMK58_RS10000 PF04607 Region found in RelA / SpoT proteins AMK58_RS10005 PF13746 4Fe-4S dicluster domain AMK58_RS10005 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS10005 PF12801 4Fe-4S binding domain AMK58_RS10020 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS10020 PF13291 ACT domain AMK58_RS10035 PF02272 DHHA1 domain AMK58_RS10035 PF01411 tRNA synthetases class II (A) AMK58_RS10035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS10040 PF00154 recA bacterial DNA recombination protein AMK58_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS10050 PF00072 Response regulator receiver domain AMK58_RS10050 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS10050 PF08448 PAS fold AMK58_RS10050 PF13188 PAS domain AMK58_RS10055 PF01312 FlhB HrpN YscU SpaS Family AMK58_RS10060 PF01311 Bacterial export proteins, family 1 AMK58_RS10065 PF01313 Bacterial export proteins, family 3 AMK58_RS10070 PF02049 Flagellar hook-basal body complex protein FliE AMK58_RS10075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10080 PF00460 Flagella basal body rod protein AMK58_RS10085 PF01312 FlhB HrpN YscU SpaS Family AMK58_RS10100 PF00813 FliP family AMK58_RS10105 PF02705 K+ potassium transporter AMK58_RS10115 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMK58_RS10115 PF00691 OmpA family AMK58_RS10145 PF02154 Flagellar motor switch protein FliM AMK58_RS10145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMK58_RS10155 PF00460 Flagella basal body rod protein AMK58_RS10155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10160 PF00460 Flagella basal body rod protein AMK58_RS10170 PF02107 Flagellar L-ring protein AMK58_RS10175 PF17843 MycE methyltransferase N-terminal AMK58_RS10180 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMK58_RS10185 PF10768 Class II flagellar assembly regulator AMK58_RS10190 PF02119 Flagellar P-ring protein AMK58_RS10195 PF10135 Rod binding protein AMK58_RS10195 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMK58_RS10210 PF03963 Flagellar hook capping protein - N-terminal region AMK58_RS10235 PF13847 Methyltransferase domain AMK58_RS10235 PF10119 Predicted methyltransferase regulatory domain AMK58_RS10245 PF00664 ABC transporter transmembrane region AMK58_RS10245 PF00005 ABC transporter AMK58_RS10250 PF01197 Ribosomal protein L31 AMK58_RS10260 PF00011 Hsp20/alpha crystallin family AMK58_RS10265 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS10265 PF13188 PAS domain AMK58_RS10265 PF00989 PAS fold AMK58_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS10270 PF00364 Biotin-requiring enzyme AMK58_RS10270 PF00561 alpha/beta hydrolase fold AMK58_RS10275 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS10280 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMK58_RS10295 PF07729 FCD domain AMK58_RS10295 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS10300 PF05191 Adenylate kinase, active site lid AMK58_RS10305 PF00344 SecY translocase AMK58_RS10310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMK58_RS10315 PF00327 Ribosomal protein L30p/L7e AMK58_RS10320 PF00333 Ribosomal protein S5, N-terminal domain AMK58_RS10320 PF03719 Ribosomal protein S5, C-terminal domain AMK58_RS10325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMK58_RS10330 PF00347 Ribosomal protein L6 AMK58_RS10335 PF00410 Ribosomal protein S8 AMK58_RS10340 PF00253 Ribosomal protein S14p/S29e AMK58_RS10345 PF00673 ribosomal L5P family C-terminus AMK58_RS10345 PF00281 Ribosomal protein L5 AMK58_RS10350 PF00467 KOW motif AMK58_RS10350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMK58_RS10355 PF00238 Ribosomal protein L14p/L23e AMK58_RS10360 PF00366 Ribosomal protein S17 AMK58_RS10365 PF00831 Ribosomal L29 protein AMK58_RS10370 PF00252 Ribosomal protein L16p/L10e AMK58_RS10375 PF07650 KH domain AMK58_RS10375 PF00189 Ribosomal protein S3, C-terminal domain AMK58_RS10380 PF00237 Ribosomal protein L22p/L17e AMK58_RS10385 PF00203 Ribosomal protein S19 AMK58_RS10390 PF00181 Ribosomal Proteins L2, RNA binding domain AMK58_RS10390 PF03947 Ribosomal Proteins L2, C-terminal domain AMK58_RS10395 PF00276 Ribosomal protein L23 AMK58_RS10400 PF00573 Ribosomal protein L4/L1 family AMK58_RS10405 PF00297 Ribosomal protein L3 AMK58_RS10410 PF00338 Ribosomal protein S10p/S20e AMK58_RS10415 PF03144 Elongation factor Tu domain 2 AMK58_RS10415 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10415 PF03143 Elongation factor Tu C-terminal domain AMK58_RS10420 PF00679 Elongation factor G C-terminus AMK58_RS10420 PF14492 Elongation Factor G, domain II AMK58_RS10420 PF03764 Elongation factor G, domain IV AMK58_RS10420 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10420 PF03144 Elongation factor Tu domain 2 AMK58_RS10425 PF00177 Ribosomal protein S7p/S5e AMK58_RS10430 PF00164 Ribosomal protein S12/S23 AMK58_RS10435 PF01965 DJ-1/PfpI family AMK58_RS10440 PF04997 RNA polymerase Rpb1, domain 1 AMK58_RS10440 PF00623 RNA polymerase Rpb1, domain 2 AMK58_RS10440 PF05000 RNA polymerase Rpb1, domain 4 AMK58_RS10440 PF04983 RNA polymerase Rpb1, domain 3 AMK58_RS10440 PF04998 RNA polymerase Rpb1, domain 5 AMK58_RS10445 PF04560 RNA polymerase Rpb2, domain 7 AMK58_RS10445 PF00562 RNA polymerase Rpb2, domain 6 AMK58_RS10445 PF10385 RNA polymerase beta subunit external 1 domain AMK58_RS10445 PF04565 RNA polymerase Rpb2, domain 3 AMK58_RS10445 PF04561 RNA polymerase Rpb2, domain 2 AMK58_RS10445 PF04563 RNA polymerase beta subunit AMK58_RS10450 PF16320 Ribosomal protein L7/L12 dimerisation domain AMK58_RS10450 PF00542 Ribosomal protein L7/L12 C-terminal domain AMK58_RS10455 PF00466 Ribosomal protein L10 AMK58_RS10460 PF00687 Ribosomal protein L1p/L10e family AMK58_RS10465 PF03946 Ribosomal protein L11, N-terminal domain AMK58_RS10465 PF00298 Ribosomal protein L11, RNA binding domain AMK58_RS10470 PF00467 KOW motif AMK58_RS10470 PF02357 Transcription termination factor nusG AMK58_RS10485 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10485 PF03143 Elongation factor Tu C-terminal domain AMK58_RS10485 PF03144 Elongation factor Tu domain 2 AMK58_RS10500 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS10500 PF00588 SpoU rRNA Methylase family AMK58_RS10535 PF13458 Periplasmic binding protein AMK58_RS10545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS10545 PF00005 ABC transporter AMK58_RS10550 PF00005 ABC transporter AMK58_RS10560 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMK58_RS10560 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMK58_RS10560 PF02358 Trehalose-phosphatase AMK58_RS10560 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMK58_RS10565 PF01979 Amidohydrolase family AMK58_RS10575 PF00480 ROK family AMK58_RS10590 PF01546 Peptidase family M20/M25/M40 AMK58_RS10590 PF07687 Peptidase dimerisation domain AMK58_RS10595 PF00005 ABC transporter AMK58_RS10600 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS10600 PF00005 ABC transporter AMK58_RS10610 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS10630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK58_RS10630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK58_RS10640 PF00005 ABC transporter AMK58_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS10655 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS10655 PF17926 Tetracyclin repressor-like, C-terminal domain AMK58_RS10665 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS10685 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS10685 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS10685 PF00501 AMP-binding enzyme AMK58_RS10690 PF00005 ABC transporter AMK58_RS10710 PF03462 PCRF domain AMK58_RS10710 PF00472 RF-1 domain AMK58_RS10715 PF03062 MBOAT, membrane-bound O-acyltransferase family AMK58_RS10725 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS10725 PF00912 Transglycosylase AMK58_RS10725 PF17092 Penicillin-binding protein OB-like domain AMK58_RS10730 PF11741 AMIN domain AMK58_RS10730 PF01520 N-acetylmuramoyl-L-alanine amidase AMK58_RS10735 PF12111 Polyribonucleotide phosphorylase C terminal AMK58_RS10735 PF10150 Ribonuclease E/G family AMK58_RS10735 PF00575 S1 RNA binding domain AMK58_RS10740 PF03449 Transcription elongation factor, N-terminal AMK58_RS10740 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS10765 PF00155 Aminotransferase class I and II AMK58_RS10770 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMK58_RS10775 PF04452 RNA methyltransferase AMK58_RS10780 PF01040 UbiA prenyltransferase family AMK58_RS10800 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMK58_RS10815 PF01523 Putative modulator of DNA gyrase AMK58_RS10825 PF00781 Diacylglycerol kinase catalytic domain AMK58_RS10835 PF13439 Glycosyltransferase Family 4 AMK58_RS10835 PF00534 Glycosyl transferases group 1 AMK58_RS10845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMK58_RS10850 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMK58_RS10860 PF01810 LysE type translocator AMK58_RS10885 PF02515 CoA-transferase family III AMK58_RS10895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS10920 PF01814 Hemerythrin HHE cation binding domain AMK58_RS10925 PF02867 Ribonucleotide reductase, barrel domain AMK58_RS10925 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AMK58_RS10950 PF05036 Sporulation related domain AMK58_RS10950 PF03330 Lytic transglycolase AMK58_RS10955 PF00106 short chain dehydrogenase AMK58_RS10960 PF01575 MaoC like domain AMK58_RS10965 PF06574 FAD synthetase AMK58_RS10965 PF01687 Riboflavin kinase AMK58_RS10970 PF00156 Phosphoribosyl transferase domain AMK58_RS10975 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS10975 PF08264 Anticodon-binding domain of tRNA AMK58_RS10980 PF01252 Signal peptidase (SPase) II AMK58_RS10990 PF00675 Insulinase (Peptidase family M16) AMK58_RS10990 PF05193 Peptidase M16 inactive domain AMK58_RS10995 PF05193 Peptidase M16 inactive domain AMK58_RS11005 PF00342 Phosphoglucose isomerase AMK58_RS11025 PF08676 MutL C terminal dimerisation domain AMK58_RS11025 PF01119 DNA mismatch repair protein, C-terminal domain AMK58_RS11045 PF00474 Sodium:solute symporter family AMK58_RS11050 PF00571 CBS domain AMK58_RS11050 PF00478 IMP dehydrogenase / GMP reductase domain AMK58_RS11060 PF01979 Amidohydrolase family AMK58_RS11075 PF00005 ABC transporter AMK58_RS11085 PF09084 NMT1/THI5 like AMK58_RS11090 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS11095 PF00884 Sulfatase AMK58_RS11100 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK58_RS11110 PF00561 alpha/beta hydrolase fold AMK58_RS11115 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK58_RS11120 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS11120 PF07702 UTRA domain AMK58_RS11125 PF00248 Aldo/keto reductase family AMK58_RS11145 PF01593 Flavin containing amine oxidoreductase AMK58_RS11150 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS11150 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS11165 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS11165 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS11190 PF07977 FabA-like domain AMK58_RS11200 PF00550 Phosphopantetheine attachment site AMK58_RS11205 PF00550 Phosphopantetheine attachment site AMK58_RS11235 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS11240 PF09827 CRISPR associated protein Cas2 AMK58_RS11245 PF01867 CRISPR associated protein Cas1 AMK58_RS11265 PF09704 CRISPR-associated protein (Cas_Cas5) AMK58_RS11275 PF00144 Beta-lactamase AMK58_RS11280 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS11285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMK58_RS11290 PF16657 Maltogenic Amylase, C-terminal domain AMK58_RS11290 PF00128 Alpha amylase, catalytic domain AMK58_RS11305 PF01479 S4 domain AMK58_RS11305 PF00849 RNA pseudouridylate synthase AMK58_RS11310 PF07311 Dodecin AMK58_RS11315 PF14437 MafB19-like deaminase AMK58_RS11325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMK58_RS11325 PF02843 Phosphoribosylglycinamide synthetase, C domain AMK58_RS11325 PF02844 Phosphoribosylglycinamide synthetase, N domain AMK58_RS11330 PF02601 Exonuclease VII, large subunit AMK58_RS11330 PF13742 OB-fold nucleic acid binding domain AMK58_RS11340 PF01979 Amidohydrolase family AMK58_RS11345 PF03129 Anticodon binding domain AMK58_RS11345 PF13393 Histidyl-tRNA synthetase AMK58_RS11365 PF00210 Ferritin-like domain AMK58_RS11385 PF00994 Probable molybdopterin binding domain AMK58_RS11385 PF02464 Competence-damaged protein AMK58_RS11390 PF03749 Sugar fermentation stimulation protein RE domain AMK58_RS11390 PF17746 SfsA N-terminal OB domain AMK58_RS11395 PF00557 Metallopeptidase family M24 AMK58_RS11400 PF04002 RadC-like JAB domain AMK58_RS11410 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS11410 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS11410 PF00563 EAL domain AMK58_RS11415 PF00206 Lyase AMK58_RS11415 PF10397 Adenylosuccinate lyase C-terminus AMK58_RS11430 PF01259 SAICAR synthetase AMK58_RS11435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMK58_RS11440 PF12833 Helix-turn-helix domain AMK58_RS11440 PF02805 Metal binding domain of Ada AMK58_RS11440 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS11440 PF06029 AlkA N-terminal domain AMK58_RS11445 PF03475 3-alpha domain AMK58_RS11445 PF03473 MOSC domain AMK58_RS11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS11455 PF03466 LysR substrate binding domain AMK58_RS11465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMK58_RS11465 PF02769 AIR synthase related protein, C-terminal domain AMK58_RS11465 PF00586 AIR synthase related protein, N-terminal domain AMK58_RS11475 PF00462 Glutaredoxin AMK58_RS11485 PF00892 EamA-like transporter family AMK58_RS11495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMK58_RS11500 PF00163 Ribosomal protein S4/S9 N-terminal domain AMK58_RS11500 PF01479 S4 domain AMK58_RS11515 PF04397 LytTr DNA-binding domain AMK58_RS11525 PF08502 LeuA allosteric (dimerisation) domain AMK58_RS11525 PF00682 HMGL-like AMK58_RS11535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS11545 PF01757 Acyltransferase family AMK58_RS11550 PF01406 tRNA synthetases class I (C) catalytic domain AMK58_RS11550 PF09190 DALR domain AMK58_RS11555 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS11560 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS11570 PF02540 NAD synthase AMK58_RS11570 PF00795 Carbon-nitrogen hydrolase AMK58_RS11575 PF00355 Rieske [2Fe-2S] domain AMK58_RS11590 PF00144 Beta-lactamase AMK58_RS11600 PF00535 Glycosyl transferase family 2 AMK58_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS11605 PF08269 Cache domain AMK58_RS11620 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS11625 PF06508 Queuosine biosynthesis protein QueC AMK58_RS11645 PF00005 ABC transporter AMK58_RS11645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS11650 PF00005 ABC transporter AMK58_RS11665 PF00829 Ribosomal prokaryotic L21 protein AMK58_RS11670 PF01016 Ribosomal L27 protein AMK58_RS11675 PF01926 50S ribosome-binding GTPase AMK58_RS11675 PF01018 GTP1/OBG AMK58_RS11680 PF00696 Amino acid kinase family AMK58_RS11680 PF01472 PUA domain AMK58_RS11685 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS11700 PF01925 Sulfite exporter TauE/SafE AMK58_RS11705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS11705 PF00034 Cytochrome c AMK58_RS11705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS11710 PF00171 Aldehyde dehydrogenase family AMK58_RS11715 PF01467 Cytidylyltransferase-like AMK58_RS11725 PF02590 Predicted SPOUT methyltransferase AMK58_RS11730 PF01676 Metalloenzyme superfamily AMK58_RS11730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMK58_RS11740 PF03572 Peptidase family S41 AMK58_RS11740 PF13180 PDZ domain AMK58_RS11750 PF00293 NUDIX domain AMK58_RS11760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMK58_RS11765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS11765 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK58_RS11770 PF00231 ATP synthase AMK58_RS11775 PF00306 ATP synthase alpha/beta chain, C terminal domain AMK58_RS11775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS11775 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK58_RS11780 PF00213 ATP synthase delta (OSCP) subunit AMK58_RS11795 PF00270 DEAD/DEAH box helicase AMK58_RS11795 PF18074 Primosomal protein N C-terminal domain AMK58_RS11795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMK58_RS11795 PF17764 3′ DNA-binding domain (3′BD) AMK58_RS11800 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMK58_RS11810 PF02899 Phage integrase, N-terminal SAM-like domain AMK58_RS11810 PF00589 Phage integrase family AMK58_RS11815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS11815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK58_RS11825 PF00561 alpha/beta hydrolase fold AMK58_RS11835 PF00294 pfkB family carbohydrate kinase AMK58_RS11835 PF01467 Cytidylyltransferase-like AMK58_RS11845 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS11855 PF13649 Methyltransferase domain AMK58_RS11875 PF13649 Methyltransferase domain AMK58_RS11880 PF00162 Phosphoglycerate kinase AMK58_RS11885 PF02132 RecR protein AMK58_RS11885 PF13662 Toprim domain AMK58_RS11890 PF02575 YbaB/EbfC DNA-binding family AMK58_RS11895 PF12169 DNA polymerase III subunits gamma and tau domain III AMK58_RS11895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMK58_RS11895 PF12170 DNA polymerase III tau subunit V interacting with alpha AMK58_RS11905 PF00034 Cytochrome c AMK58_RS11910 PF02348 Cytidylyltransferase AMK58_RS11915 PF00800 Prephenate dehydratase AMK58_RS11915 PF01842 ACT domain AMK58_RS11920 PF09297 NADH pyrophosphatase zinc ribbon domain AMK58_RS11920 PF00293 NUDIX domain AMK58_RS11920 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMK58_RS11925 PF00459 Inositol monophosphatase family AMK58_RS11935 PF00230 Major intrinsic protein AMK58_RS11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS11950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS11955 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS11960 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS11965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS11965 PF00005 ABC transporter AMK58_RS11975 PF00849 RNA pseudouridylate synthase AMK58_RS11980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS12000 PF01706 FliG C-terminal domain AMK58_RS12000 PF14842 FliG N-terminal domain AMK58_RS12000 PF14841 FliG middle domain AMK58_RS12005 PF00883 Cytosol aminopeptidase family, catalytic domain AMK58_RS12005 PF02789 Cytosol aminopeptidase family, N-terminal domain AMK58_RS12015 PF16868 NMT1-like family AMK58_RS12035 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMK58_RS12035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMK58_RS12035 PF01336 OB-fold nucleic acid binding domain AMK58_RS12035 PF14579 Helix-hairpin-helix motif AMK58_RS12035 PF02811 PHP domain AMK58_RS12065 PF04055 Radical SAM superfamily AMK58_RS12070 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS12070 PF00043 Glutathione S-transferase, C-terminal domain AMK58_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12080 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS12095 PF00378 Enoyl-CoA hydratase/isomerase AMK58_RS12100 PF07690 Major Facilitator Superfamily AMK58_RS12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS12110 PF03466 LysR substrate binding domain AMK58_RS12125 PF08447 PAS fold AMK58_RS12125 PF00563 EAL domain AMK58_RS12125 PF08448 PAS fold AMK58_RS12125 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS12130 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS12135 PF00202 Aminotransferase class-III AMK58_RS12145 PF00155 Aminotransferase class I and II AMK58_RS12175 PF02646 RmuC family AMK58_RS12180 PF00313 'Cold-shock' DNA-binding domain AMK58_RS12190 PF01327 Polypeptide deformylase AMK58_RS12195 PF00551 Formyl transferase AMK58_RS12195 PF02911 Formyl transferase, C-terminal domain AMK58_RS12200 PF01416 tRNA pseudouridine synthase AMK58_RS12205 PF02653 Branched-chain amino acid transport system / permease component AMK58_RS12210 PF01878 EVE domain AMK58_RS12220 PF13280 WYL domain AMK58_RS12220 PF08279 HTH domain AMK58_RS12225 PF00330 Aconitase family (aconitate hydratase) AMK58_RS12240 PF01245 Ribosomal protein L19 AMK58_RS12245 PF01746 tRNA (Guanine-1)-methyltransferase AMK58_RS12250 PF05239 PRC-barrel domain AMK58_RS12250 PF01782 RimM N-terminal domain AMK58_RS12255 PF00886 Ribosomal protein S16 AMK58_RS12260 PF02978 Signal peptide binding domain AMK58_RS12260 PF02881 SRP54-type protein, helical bundle domain AMK58_RS12260 PF00448 SRP54-type protein, GTPase domain AMK58_RS12285 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS12285 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS12285 PF00563 EAL domain AMK58_RS12295 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS12295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMK58_RS12295 PF14602 Hexapeptide repeat of succinyl-transferase AMK58_RS12300 PF01546 Peptidase family M20/M25/M40 AMK58_RS12300 PF07687 Peptidase dimerisation domain AMK58_RS12310 PF02277 Phosphoribosyltransferase AMK58_RS12315 PF02654 Cobalamin-5-phosphate synthase AMK58_RS12330 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS12330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMK58_RS12340 PF00005 ABC transporter AMK58_RS12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12345 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS12350 PF00072 Response regulator receiver domain AMK58_RS12350 PF02954 Bacterial regulatory protein, Fis family AMK58_RS12365 PF13614 AAA domain AMK58_RS12365 PF02706 Chain length determinant protein AMK58_RS12365 PF13807 G-rich domain on putative tyrosine kinase AMK58_RS12375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMK58_RS12375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMK58_RS12375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMK58_RS12380 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS12385 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS12430 PF00535 Glycosyl transferase family 2 AMK58_RS12440 PF00468 Ribosomal protein L34 AMK58_RS12445 PF00825 Ribonuclease P AMK58_RS12450 PF14849 YidC periplasmic domain AMK58_RS12450 PF02096 60Kd inner membrane protein AMK58_RS12455 PF01926 50S ribosome-binding GTPase AMK58_RS12470 PF00696 Amino acid kinase family AMK58_RS12480 PF01544 CorA-like Mg2+ transporter protein AMK58_RS12495 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMK58_RS12505 PF01274 Malate synthase AMK58_RS12510 PF00589 Phage integrase family AMK58_RS12510 PF02899 Phage integrase, N-terminal SAM-like domain AMK58_RS12525 PF01202 Shikimate kinase AMK58_RS12530 PF01761 3-dehydroquinate synthase AMK58_RS12535 PF00571 CBS domain AMK58_RS12550 PF01722 BolA-like protein AMK58_RS12555 PF00226 DnaJ domain AMK58_RS12560 PF08406 CbbQ/NirQ/NorQ C-terminal AMK58_RS12560 PF07728 AAA domain (dynein-related subfamily) AMK58_RS12560 PF12556 Cobaltochelatase CobS subunit N terminal AMK58_RS12570 PF06213 Cobalamin biosynthesis protein CobT AMK58_RS12570 PF11775 Cobalamin biosynthesis protein CobT VWA domain AMK58_RS12585 PF02678 Pirin AMK58_RS12585 PF05726 Pirin C-terminal cupin domain AMK58_RS12590 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12600 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS12600 PF00072 Response regulator receiver domain AMK58_RS12605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMK58_RS12610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMK58_RS12620 PF01266 FAD dependent oxidoreductase AMK58_RS12625 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMK58_RS12635 PF00216 Bacterial DNA-binding protein AMK58_RS12645 PF00575 S1 RNA binding domain AMK58_RS12650 PF02224 Cytidylate kinase AMK58_RS12655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK58_RS12680 PF05726 Pirin C-terminal cupin domain AMK58_RS12680 PF02678 Pirin AMK58_RS12685 PF00994 Probable molybdopterin binding domain AMK58_RS12685 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS12685 PF03454 MoeA C-terminal region (domain IV) AMK58_RS12695 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS12695 PF00072 Response regulator receiver domain AMK58_RS12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12700 PF00672 HAMP domain AMK58_RS12700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS12700 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS12700 PF00072 Response regulator receiver domain AMK58_RS12700 PF01627 Hpt domain AMK58_RS12705 PF17149 Periplasmic sensor domain found in signal transduction proteins AMK58_RS12705 PF00672 HAMP domain AMK58_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12705 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS12705 PF01627 Hpt domain AMK58_RS12705 PF00072 Response regulator receiver domain AMK58_RS12715 PF00535 Glycosyl transferase family 2 AMK58_RS12725 PF00011 Hsp20/alpha crystallin family AMK58_RS12750 PF01757 Acyltransferase family AMK58_RS12755 PF00330 Aconitase family (aconitate hydratase) AMK58_RS12755 PF00694 Aconitase C-terminal domain AMK58_RS12780 PF01008 Initiation factor 2 subunit family AMK58_RS12785 PF07568 Histidine kinase AMK58_RS12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12785 PF12282 Signal transduction histidine kinase AMK58_RS12800 PF00474 Sodium:solute symporter family AMK58_RS12805 PF04341 Protein of unknown function, DUF485 AMK58_RS12820 PF02659 Putative manganese efflux pump AMK58_RS12825 PF00795 Carbon-nitrogen hydrolase AMK58_RS12830 PF00462 Glutaredoxin AMK58_RS12835 PF14572 Phosphoribosyl synthetase-associated domain AMK58_RS12835 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMK58_RS12840 PF01313 Bacterial export proteins, family 3 AMK58_RS12845 PF08241 Methyltransferase domain AMK58_RS12865 PF03186 CobD/Cbib protein AMK58_RS12870 PF00270 DEAD/DEAH box helicase AMK58_RS12870 PF00271 Helicase conserved C-terminal domain AMK58_RS12875 PF01741 Large-conductance mechanosensitive channel, MscL AMK58_RS12880 PF02810 SEC-C motif AMK58_RS12880 PF07517 SecA DEAD-like domain AMK58_RS12880 PF01043 SecA preprotein cross-linking domain AMK58_RS12880 PF07516 SecA Wing and Scaffold domain AMK58_RS12890 PF01960 ArgJ family AMK58_RS12900 PF00293 NUDIX domain AMK58_RS12905 PF00270 DEAD/DEAH box helicase AMK58_RS12905 PF16124 RecQ zinc-binding AMK58_RS12905 PF09382 RQC domain AMK58_RS12905 PF00271 Helicase conserved C-terminal domain AMK58_RS12905 PF00570 HRDC domain AMK58_RS12930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMK58_RS12935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMK58_RS12940 PF03480 Bacterial extracellular solute-binding protein, family 7 AMK58_RS12945 PF00691 OmpA family AMK58_RS12955 PF06761 Intracellular multiplication and human macrophage-killing AMK58_RS12955 PF14331 ImcF-related N-terminal domain AMK58_RS12955 PF06744 Type VI secretion protein IcmF C-terminal AMK58_RS12970 PF00296 Luciferase-like monooxygenase AMK58_RS12975 PF01641 SelR domain AMK58_RS12980 PF01738 Dienelactone hydrolase family AMK58_RS12985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK58_RS12985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK58_RS12985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK58_RS12985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK58_RS12990 PF00313 'Cold-shock' DNA-binding domain AMK58_RS13025 PF00005 ABC transporter AMK58_RS13025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS13030 PF00005 ABC transporter AMK58_RS13030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS13035 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS13065 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMK58_RS13075 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS13075 PF00563 EAL domain AMK58_RS13075 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS13105 PF01569 PAP2 superfamily AMK58_RS13115 PF11849 Domain of unknown function (DUF3369) AMK58_RS13130 PF04024 PspC domain AMK58_RS13135 PF06667 Phage shock protein B AMK58_RS13140 PF04012 PspA/IM30 family AMK58_RS13145 PF00158 Sigma-54 interaction domain AMK58_RS13145 PF02954 Bacterial regulatory protein, Fis family AMK58_RS13155 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS13155 PF00912 Transglycosylase AMK58_RS13160 PF01593 Flavin containing amine oxidoreductase AMK58_RS13170 PF03264 NapC/NirT cytochrome c family, N-terminal region AMK58_RS13175 PF00034 Cytochrome c AMK58_RS13175 PF03150 Di-haem cytochrome c peroxidase AMK58_RS13180 PF06628 Catalase-related immune-responsive AMK58_RS13180 PF00199 Catalase AMK58_RS13185 PF00118 TCP-1/cpn60 chaperonin family AMK58_RS13190 PF00166 Chaperonin 10 Kd subunit AMK58_RS13195 PF06233 Usg-like family AMK58_RS13200 PF00959 Phage lysozyme AMK58_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS13210 PF02628 Cytochrome oxidase assembly protein AMK58_RS13235 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS13235 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS13240 PF00005 ABC transporter AMK58_RS13245 PF00924 Mechanosensitive ion channel AMK58_RS13250 PF11849 Domain of unknown function (DUF3369) AMK58_RS13255 PF00156 Phosphoribosyl transferase domain AMK58_RS13265 PF00175 Oxidoreductase NAD-binding domain AMK58_RS13265 PF00970 Oxidoreductase FAD-binding domain AMK58_RS13270 PF09856 Predicted transcriptional regulator (DUF2083) AMK58_RS13270 PF06114 IrrE N-terminal-like domain AMK58_RS13270 PF01381 Helix-turn-helix AMK58_RS13275 PF00463 Isocitrate lyase family AMK58_RS13280 PF01965 DJ-1/PfpI family AMK58_RS13285 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS13285 PF00989 PAS fold AMK58_RS13290 PF00174 Oxidoreductase molybdopterin binding domain AMK58_RS13295 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMK58_RS13295 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMK58_RS13295 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMK58_RS13300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS13320 PF05974 Domain of unknown function (DUF892) AMK58_RS13335 PF00156 Phosphoribosyl transferase domain AMK58_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13340 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK58_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS13355 PF02633 Creatinine amidohydrolase AMK58_RS13360 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMK58_RS13360 PF01078 Magnesium chelatase, subunit ChlI AMK58_RS13400 PF00589 Phage integrase family AMK58_RS13415 PF03050 Transposase IS66 family AMK58_RS13415 PF13007 Transposase C of IS166 homeodomain AMK58_RS13415 PF13817 IS66 C-terminal element AMK58_RS13415 PF13005 zinc-finger binding domain of transposase IS66 AMK58_RS13420 PF05717 IS66 Orf2 like protein AMK58_RS13425 PF00872 Transposase, Mutator family AMK58_RS13450 PF02796 Helix-turn-helix domain of resolvase AMK58_RS13450 PF00665 Integrase core domain AMK58_RS13465 PF00665 Integrase core domain AMK58_RS13470 PF01695 IstB-like ATP binding protein AMK58_RS13475 PF01695 IstB-like ATP binding protein AMK58_RS13520 PF13817 IS66 C-terminal element AMK58_RS13520 PF03050 Transposase IS66 family AMK58_RS13520 PF13007 Transposase C of IS166 homeodomain AMK58_RS13520 PF13005 zinc-finger binding domain of transposase IS66 AMK58_RS13525 PF03050 Transposase IS66 family AMK58_RS13585 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS13590 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMK58_RS13590 PF00775 Dioxygenase AMK58_RS13675 PF01078 Magnesium chelatase, subunit ChlI AMK58_RS13675 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMK58_RS13690 PF17854 FtsK alpha domain AMK58_RS13690 PF01580 FtsK/SpoIIIE family AMK58_RS13690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMK58_RS13695 PF00155 Aminotransferase class I and II AMK58_RS13700 PF00543 Nitrogen regulatory protein P-II AMK58_RS13705 PF01494 FAD binding domain AMK58_RS13710 PF02834 LigT like Phosphoesterase AMK58_RS13715 PF00248 Aldo/keto reductase family AMK58_RS13720 PF08495 FIST N domain AMK58_RS13720 PF10442 FIST C domain AMK58_RS13725 PF13472 GDSL-like Lipase/Acylhydrolase family AMK58_RS13730 PF00005 ABC transporter AMK58_RS13735 PF12704 MacB-like periplasmic core domain AMK58_RS13735 PF02687 FtsX-like permease family AMK58_RS13735 PF00005 ABC transporter AMK58_RS13740 PF17151 Periplasmic sensor domain AMK58_RS13740 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS13745 PF00226 DnaJ domain AMK58_RS13745 PF01556 DnaJ C terminal domain AMK58_RS13745 PF00684 DnaJ central domain AMK58_RS13750 PF00012 Hsp70 protein AMK58_RS13770 PF08447 PAS fold AMK58_RS13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS13770 PF13426 PAS domain AMK58_RS13775 PF00072 Response regulator receiver domain AMK58_RS13780 PF01025 GrpE AMK58_RS13785 PF01628 HrcA protein C terminal domain AMK58_RS13790 PF01138 3' exoribonuclease family, domain 1 AMK58_RS13790 PF03725 3' exoribonuclease family, domain 2 AMK58_RS13795 PF01725 Ham1 family AMK58_RS13800 PF04055 Radical SAM superfamily AMK58_RS13800 PF06969 HemN C-terminal domain AMK58_RS13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS13805 PF00672 HAMP domain AMK58_RS13810 PF00186 Dihydrofolate reductase AMK58_RS13825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMK58_RS13825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMK58_RS13830 PF13369 Transglutaminase-like superfamily AMK58_RS13835 PF02021 Uncharacterised protein family UPF0102 AMK58_RS13840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK58_RS13855 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS13860 PF01740 STAS domain AMK58_RS13870 PF05190 MutS family domain IV AMK58_RS13870 PF01624 MutS domain I AMK58_RS13870 PF05188 MutS domain II AMK58_RS13870 PF05192 MutS domain III AMK58_RS13870 PF00488 MutS domain V AMK58_RS13885 PF01966 HD domain AMK58_RS13885 PF01909 Nucleotidyltransferase domain AMK58_RS13885 PF08335 GlnD PII-uridylyltransferase AMK58_RS13890 PF00672 HAMP domain AMK58_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS13890 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS13890 PF01627 Hpt domain AMK58_RS13890 PF00072 Response regulator receiver domain AMK58_RS13890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS14420 PF00294 pfkB family carbohydrate kinase AMK58_RS14540 PF00583 Acetyltransferase (GNAT) family AMK58_RS14540 PF13607 Succinyl-CoA ligase like flavodoxin domain AMK58_RS14540 PF13380 CoA binding domain AMK58_RS14760 PF00005 ABC transporter AMK58_RS15295 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS15300 PF00290 Tryptophan synthase alpha chain AMK58_RS15320 PF08245 Mur ligase middle domain AMK58_RS15320 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS15620 PF00270 DEAD/DEAH box helicase AMK58_RS15620 PF08148 DSHCT (NUC185) domain AMK58_RS15620 PF00271 Helicase conserved C-terminal domain AMK58_RS15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS15680 PF13426 PAS domain AMK58_RS15680 PF00072 Response regulator receiver domain AMK58_RS15700 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS15700 PF00989 PAS fold AMK58_RS15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS16040 PF00271 Helicase conserved C-terminal domain AMK58_RS16040 PF00270 DEAD/DEAH box helicase AMK58_RS16165 PF00929 Exonuclease AMK58_RS16365 PF00893 Small Multidrug Resistance protein AMK58_RS16715 PF03707 Bacterial signalling protein N terminal repeat AMK58_RS16715 PF00990 Diguanylate cyclase, GGDEF domain AMK58_RS16715 PF00563 EAL domain AMK58_RS16805 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS16805 PF00912 Transglycosylase AMK58_RS16915 PF07726 ATPase family associated with various cellular activities (AAA) AMK58_RS16915 PF17863 AAA lid domain AMK58_RS17180 PF02308 MgtC family AMK58_RS17390 PF08482 ATP-dependent helicase C-terminal AMK58_RS17390 PF00271 Helicase conserved C-terminal domain AMK58_RS17390 PF04408 Helicase associated domain (HA2) AMK58_RS17390 PF00270 DEAD/DEAH box helicase AMK58_RS17410 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS17410 PF00072 Response regulator receiver domain AMK58_RS17705 PF01820 D-ala D-ala ligase N-terminus AMK58_RS17705 PF07478 D-ala D-ala ligase C-terminus AMK58_RS17815 PF05175 Methyltransferase small domain AMK58_RS17850 PF00682 HMGL-like AMK58_RS17850 PF08502 LeuA allosteric (dimerisation) domain AMK58_RS17885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS17885 PF00128 Alpha amylase, catalytic domain AMK58_RS17885 PF11941 Domain of unknown function (DUF3459) AMK58_RS18130 PF00430 ATP synthase B/B' CF(0) AMK58_RS18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS18155 PF08269 Cache domain AMK58_RS18210 PF00266 Aminotransferase class-V AMK58_RS18370 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS18405 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS18405 PF11844 Domain of unknown function (DUF3364) AMK58_RS18530 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS18530 PF01565 FAD binding domain AMK58_RS18560 PF08335 GlnD PII-uridylyltransferase AMK58_RS18560 PF03710 Glutamate-ammonia ligase adenylyltransferase AMK58_RS18900 PF00698 Acyl transferase domain AMK58_RS18900 PF14765 Polyketide synthase dehydratase AMK58_RS18900 PF16197 Ketoacyl-synthetase C-terminal extension AMK58_RS18900 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS18900 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS18900 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS18900 PF08659 KR domain AMK58_RS18900 PF00550 Phosphopantetheine attachment site AMK58_RS19170 PF02254 TrkA-N domain AMK58_RS19170 PF00999 Sodium/hydrogen exchanger family AMK58_RS19305 PF00005 ABC transporter AMK58_RS19335 PF00591 Glycosyl transferase family, a/b domain AMK58_RS19335 PF02885 Glycosyl transferase family, helical bundle domain AMK58_RS19335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMK58_RS19485 PF13426 PAS domain AMK58_RS19485 PF08447 PAS fold AMK58_RS19485 PF00989 PAS fold AMK58_RS19485 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS19485 PF13493 Domain of unknown function (DUF4118) AMK58_RS19530 PF00849 RNA pseudouridylate synthase AMK58_RS19895 PF00318 Ribosomal protein S2 AMK58_RS19925 PF17820 PDZ domain AMK58_RS19925 PF02163 Peptidase family M50 AMK58_RS20065 PF00425 chorismate binding enzyme AMK58_RS20065 PF04715 Anthranilate synthase component I, N terminal region AMK58_RS20135 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS20135 PF17862 AAA+ lid domain AMK58_RS20135 PF06480 FtsH Extracellular AMK58_RS20135 PF01434 Peptidase family M41 AMK58_RS20160 PF00221 Aromatic amino acid lyase AMK58_RS20470 PF04851 Type III restriction enzyme, res subunit AMK58_RS20470 PF08463 EcoEI R protein C-terminal AMK58_RS20470 PF00271 Helicase conserved C-terminal domain AMK58_RS20470 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AMK58_RS20480 PF02384 N-6 DNA Methylase AMK58_RS20480 PF12161 HsdM N-terminal domain AMK58_RS20570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS20570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS20570 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS20585 PF08442 ATP-grasp domain AMK58_RS20585 PF00549 CoA-ligase AMK58_RS20860 PF13180 PDZ domain AMK58_RS20990 PF00842 Alanine racemase, C-terminal domain AMK58_RS20990 PF01168 Alanine racemase, N-terminal domain AMK58_RS21045 PF01464 Transglycosylase SLT domain AMK58_RS21335 PF08264 Anticodon-binding domain of tRNA AMK58_RS21335 PF10458 Valyl tRNA synthetase tRNA binding arm AMK58_RS21335 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS21405 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS21740 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS21865 PF00005 ABC transporter AMK58_RS22165 PF00294 pfkB family carbohydrate kinase AMK58_RS22345 PF01209 ubiE/COQ5 methyltransferase family AMK58_RS22400 PF08402 TOBE domain AMK58_RS22400 PF00005 ABC transporter AMK58_RS22415 PF05425 Copper resistance protein D AMK58_RS22565 PF00692 dUTPase AMK58_RS22580 PF00158 Sigma-54 interaction domain AMK58_RS22580 PF00072 Response regulator receiver domain AMK58_RS22580 PF02954 Bacterial regulatory protein, Fis family AMK58_RS22740 PF00909 Ammonium Transporter Family AMK58_RS23305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS23305 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS23430 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS23430 PF00501 AMP-binding enzyme AMK58_RS23430 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS23515 PF05088 Bacterial NAD-glutamate dehydrogenase AMK58_RS23525 PF05088 Bacterial NAD-glutamate dehydrogenase AMK58_RS23670 PF11849 Domain of unknown function (DUF3369) AMK58_RS23735 PF00072 Response regulator receiver domain AMK58_RS23735 PF01339 CheB methylesterase AMK58_RS23875 PF00549 CoA-ligase AMK58_RS23875 PF08442 ATP-grasp domain AMK58_RS23970 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS23970 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS24240 PF01180 Dihydroorotate dehydrogenase AMK58_RS24505 PF00092 von Willebrand factor type A domain AMK58_RS24635 PF17854 FtsK alpha domain AMK58_RS24635 PF01580 FtsK/SpoIIIE family AMK58_RS24635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMK58_RS24980 PF01966 HD domain AMK58_RS24980 PF01909 Nucleotidyltransferase domain AMK58_RS24980 PF08335 GlnD PII-uridylyltransferase AMK58_RS25050 PF02675 S-adenosylmethionine decarboxylase AMK58_RS25070 PF00300 Histidine phosphatase superfamily (branch 1) AMK58_RS25125 PF00005 ABC transporter AMK58_RS25125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS25305 PF03190 Protein of unknown function, DUF255 AMK58_RS25340 PF00117 Glutamine amidotransferase class-I AMK58_RS25350 PF00475 Imidazoleglycerol-phosphate dehydratase AMK58_RS25705 PF03109 ABC1 family AMK58_RS25790 PF00394 Multicopper oxidase AMK58_RS25790 PF07731 Multicopper oxidase AMK58_RS25790 PF07732 Multicopper oxidase AMK58_RS25925 PF00692 dUTPase AMK58_RS25930 PF02441 Flavoprotein AMK58_RS25930 PF04127 DNA / pantothenate metabolism flavoprotein AMK58_RS25950 PF01627 Hpt domain AMK58_RS25950 PF00072 Response regulator receiver domain AMK58_RS25950 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS25950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS25950 PF00672 HAMP domain AMK58_RS25950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS25955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS25955 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS25955 PF01627 Hpt domain AMK58_RS25955 PF00072 Response regulator receiver domain AMK58_RS25955 PF00672 HAMP domain AMK58_RS25955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS26100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMK58_RS26100 PF01588 Putative tRNA binding domain AMK58_RS26100 PF03483 B3/4 domain AMK58_RS26100 PF03484 tRNA synthetase B5 domain AMK58_RS26100 PF03147 Ferredoxin-fold anticodon binding domain AMK58_RS26175 PF00483 Nucleotidyl transferase AMK58_RS26245 PF00764 Arginosuccinate synthase AMK58_RS26525 PF04379 ApaG domain AMK58_RS26875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS26965 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS26965 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS26965 PF00501 AMP-binding enzyme AMK58_RS26970 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS26970 PF00501 AMP-binding enzyme AMK58_RS26970 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK58_RS27025 PF05088 Bacterial NAD-glutamate dehydrogenase AMK58_RS27140 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS27195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS27195 PF00672 HAMP domain AMK58_RS27195 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS27195 PF01627 Hpt domain AMK58_RS27195 PF00072 Response regulator receiver domain AMK58_RS27195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK58_RS27200 PF11849 Domain of unknown function (DUF3369) AMK58_RS27395 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS27520 PF04204 Homoserine O-succinyltransferase AMK58_RS27870 PF01624 MutS domain I AMK58_RS27870 PF05188 MutS domain II AMK58_RS27870 PF05192 MutS domain III AMK58_RS27870 PF05190 MutS family domain IV AMK58_RS27870 PF00488 MutS domain V AMK58_RS27960 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS28065 PF00005 ABC transporter AMK58_RS28065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS28245 PF03562 MltA specific insert domain AMK58_RS28245 PF06725 3D domain AMK58_RS28290 PF00005 ABC transporter AMK58_RS28490 PF00009 Elongation factor Tu GTP binding domain AMK58_RS28490 PF04760 Translation initiation factor IF-2, N-terminal region AMK58_RS28490 PF08364 Bacterial translation initiation factor IF-2 associated region AMK58_RS28490 PF11987 Translation-initiation factor 2 AMK58_RS28510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMK58_RS28510 PF00575 S1 RNA binding domain AMK58_RS28510 PF00013 KH domain AMK58_RS28510 PF01138 3' exoribonuclease family, domain 1 AMK58_RS28510 PF03725 3' exoribonuclease family, domain 2 AMK58_RS28530 PF12544 Lysine-2,3-aminomutase AMK58_RS28530 PF04055 Radical SAM superfamily AMK58_RS28585 PF13380 CoA binding domain AMK58_RS28585 PF00583 Acetyltransferase (GNAT) family AMK58_RS28585 PF13607 Succinyl-CoA ligase like flavodoxin domain AMK58_RS28680 PF07732 Multicopper oxidase AMK58_RS28680 PF07731 Multicopper oxidase AMK58_RS28680 PF00394 Multicopper oxidase AMK58_RS28725 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS28725 PF12801 4Fe-4S binding domain AMK58_RS28725 PF13746 4Fe-4S dicluster domain AMK58_RS28805 PF01909 Nucleotidyltransferase domain AMK58_RS28805 PF01966 HD domain AMK58_RS28805 PF08335 GlnD PII-uridylyltransferase AMK58_RS29265 PF02390 Putative methyltransferase