AMK58_RS00165	PWY-6834	spermidine biosynthesis III
AMK58_RS00225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK58_RS00225	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK58_RS00225	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK58_RS00225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK58_RS00290	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS00290	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK58_RS00305	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS00410	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK58_RS00425	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMK58_RS00425	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMK58_RS00450	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS00595	PWY-2941	L-lysine biosynthesis II
AMK58_RS00595	PWY-2942	L-lysine biosynthesis III
AMK58_RS00595	PWY-5097	L-lysine biosynthesis VI
AMK58_RS00665	PWY-6454	vancomycin resistance I
AMK58_RS00665	PWY-6455	vancomycin resistance II
AMK58_RS00670	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK58_RS00670	PWY-5368	dimorphecolate biosynthesis
AMK58_RS00670	PWY-5995	linoleate biosynthesis I (plants)
AMK58_RS00670	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK58_RS00670	PWY-6803	phosphatidylcholine acyl editing
AMK58_RS00670	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK58_RS00670	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK58_RS00670	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK58_RS00670	PWY-7470	phosphatidylcholine biosynthesis VII
AMK58_RS00670	PWY-7618	ricinoleate biosynthesis
AMK58_RS00730	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK58_RS00730	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMK58_RS00845	PWY-5392	reductive TCA cycle II
AMK58_RS00845	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS00845	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS00845	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS00845	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS00845	PWY-6728	methylaspartate cycle
AMK58_RS00845	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS00845	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS00850	PWY-5481	pyruvate fermentation to lactate
AMK58_RS00850	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS00865	PWY-7205	CMP phosphorylation
AMK58_RS00875	PWY-5839	menaquinol-7 biosynthesis
AMK58_RS00875	PWY-5844	menaquinol-9 biosynthesis
AMK58_RS00875	PWY-5849	menaquinol-6 biosynthesis
AMK58_RS00875	PWY-5890	menaquinol-10 biosynthesis
AMK58_RS00875	PWY-5891	menaquinol-11 biosynthesis
AMK58_RS00875	PWY-5892	menaquinol-12 biosynthesis
AMK58_RS00875	PWY-5895	menaquinol-13 biosynthesis
AMK58_RS00980	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS00980	PWY-4521	arsenite oxidation I (respiratory)
AMK58_RS00980	PWY-6692	Fe(II) oxidation
AMK58_RS00980	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK58_RS00985	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS00985	PWY-4521	arsenite oxidation I (respiratory)
AMK58_RS00985	PWY-6692	Fe(II) oxidation
AMK58_RS00985	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK58_RS01020	PWY-1281	sulfoacetaldehyde degradation I
AMK58_RS01020	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK58_RS01020	PWY-5482	pyruvate fermentation to acetate II
AMK58_RS01020	PWY-5485	pyruvate fermentation to acetate IV
AMK58_RS01020	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS01020	PWY-6637	sulfolactate degradation II
AMK58_RS01020	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK58_RS01080	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS01090	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS01090	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS01090	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS01090	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK58_RS01310	PWY-622	starch biosynthesis
AMK58_RS01315	PWY-622	starch biosynthesis
AMK58_RS01360	PWY-2201	folate transformations I
AMK58_RS01375	PWY-4983	L-citrulline-nitric oxide cycle
AMK58_RS01375	PWY-4984	urea cycle
AMK58_RS01375	PWY-5	canavanine biosynthesis
AMK58_RS01375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS01375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS01470	PWY-7158	L-phenylalanine degradation V
AMK58_RS01475	PWY-5381	pyridine nucleotide cycling (plants)
AMK58_RS01485	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMK58_RS01485	PWY-2201	folate transformations I
AMK58_RS01485	PWY-3841	folate transformations II
AMK58_RS01485	PWY-5030	L-histidine degradation III
AMK58_RS01485	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS01485	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMK58_RS01590	PWY-101	photosynthesis light reactions
AMK58_RS01590	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMK58_RS01640	PWY-4381	fatty acid biosynthesis initiation I
AMK58_RS01640	PWY-5743	3-hydroxypropanoate cycle
AMK58_RS01640	PWY-5744	glyoxylate assimilation
AMK58_RS01640	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK58_RS01640	PWY-6679	jadomycin biosynthesis
AMK58_RS01640	PWY-6722	candicidin biosynthesis
AMK58_RS01640	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS01645	PWY-2161	folate polyglutamylation
AMK58_RS01675	PWY-5663	tetrahydrobiopterin biosynthesis I
AMK58_RS01675	PWY-5664	tetrahydrobiopterin biosynthesis II
AMK58_RS01675	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMK58_RS01675	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK58_RS01675	PWY-6983	tetrahydrobiopterin biosynthesis III
AMK58_RS01675	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMK58_RS01695	PWY-5663	tetrahydrobiopterin biosynthesis I
AMK58_RS01695	PWY-5664	tetrahydrobiopterin biosynthesis II
AMK58_RS01695	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMK58_RS01695	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK58_RS01695	PWY-6983	tetrahydrobiopterin biosynthesis III
AMK58_RS01695	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMK58_RS01955	PWY-3561	choline biosynthesis III
AMK58_RS01955	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMK58_RS02020	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS02020	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK58_RS02025	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS02025	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK58_RS02035	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK58_RS02035	PWY-5368	dimorphecolate biosynthesis
AMK58_RS02035	PWY-5995	linoleate biosynthesis I (plants)
AMK58_RS02035	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK58_RS02035	PWY-6803	phosphatidylcholine acyl editing
AMK58_RS02035	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK58_RS02035	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK58_RS02035	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK58_RS02035	PWY-7470	phosphatidylcholine biosynthesis VII
AMK58_RS02035	PWY-7618	ricinoleate biosynthesis
AMK58_RS02045	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK58_RS02045	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK58_RS02065	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMK58_RS02065	PWY-7118	chitin degradation to ethanol
AMK58_RS02100	PWY-6825	phosphatidylcholine biosynthesis V
AMK58_RS02105	PWY-7651	heparan sulfate degradation
AMK58_RS02110	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK58_RS02110	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK58_RS02110	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK58_RS02140	PWY-5022	4-aminobutanoate degradation V
AMK58_RS02140	PWY-6728	methylaspartate cycle
AMK58_RS02140	PWY-7126	ethylene biosynthesis IV
AMK58_RS02210	PWY-5692	allantoin degradation to glyoxylate II
AMK58_RS02210	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AMK58_RS02460	PWY-6617	adenosine nucleotides degradation III
AMK58_RS02475	PWY-2941	L-lysine biosynthesis II
AMK58_RS02475	PWY-5097	L-lysine biosynthesis VI
AMK58_RS02505	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMK58_RS02525	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK58_RS02525	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK58_RS02555	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK58_RS02560	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK58_RS02565	PWY-5392	reductive TCA cycle II
AMK58_RS02565	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS02565	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS02565	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS02565	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS02565	PWY-6728	methylaspartate cycle
AMK58_RS02565	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS02565	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS02570	PWY-5392	reductive TCA cycle II
AMK58_RS02570	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS02570	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS02570	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS02570	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS02570	PWY-6728	methylaspartate cycle
AMK58_RS02570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS02570	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS02575	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK58_RS02575	PWY-5392	reductive TCA cycle II
AMK58_RS02575	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK58_RS02575	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS02575	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS02575	PWY-6728	methylaspartate cycle
AMK58_RS02575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS02575	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK58_RS02575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS02590	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS02660	PWY-2941	L-lysine biosynthesis II
AMK58_RS02660	PWY-2942	L-lysine biosynthesis III
AMK58_RS02660	PWY-5097	L-lysine biosynthesis VI
AMK58_RS02660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS02660	PWY-6559	spermidine biosynthesis II
AMK58_RS02660	PWY-6562	norspermidine biosynthesis
AMK58_RS02660	PWY-7153	grixazone biosynthesis
AMK58_RS02660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS02680	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS02680	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK58_RS02680	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK58_RS02680	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS02680	PWY-6728	methylaspartate cycle
AMK58_RS02680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS02680	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS02680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK58_RS02685	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS02685	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK58_RS02685	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK58_RS02685	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS02685	PWY-6728	methylaspartate cycle
AMK58_RS02685	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS02685	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS02685	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK58_RS02810	PWY-6899	base-degraded thiamin salvage
AMK58_RS02810	PWY-7356	thiamin salvage IV (yeast)
AMK58_RS03015	PWY-5686	UMP biosynthesis
AMK58_RS03180	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMK58_RS03315	PWY-6654	phosphopantothenate biosynthesis III
AMK58_RS03370	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS03370	PWY-5686	UMP biosynthesis
AMK58_RS03370	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS03705	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK58_RS03705	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK58_RS03705	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMK58_RS03710	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS03750	PWY-1281	sulfoacetaldehyde degradation I
AMK58_RS03750	PWY-5482	pyruvate fermentation to acetate II
AMK58_RS03750	PWY-5485	pyruvate fermentation to acetate IV
AMK58_RS03750	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS03750	PWY-6637	sulfolactate degradation II
AMK58_RS03755	PWY-5482	pyruvate fermentation to acetate II
AMK58_RS03755	PWY-5485	pyruvate fermentation to acetate IV
AMK58_RS03755	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS03860	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMK58_RS03885	PWY-2201	folate transformations I
AMK58_RS03885	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS03905	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS03905	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS03910	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS03910	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS03915	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS03915	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS03925	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK58_RS03925	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK58_RS03925	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK58_RS03925	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK58_RS03935	PWY-5103	L-isoleucine biosynthesis III
AMK58_RS03935	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS03935	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS03935	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK58_RS03940	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK58_RS03940	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK58_RS03940	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK58_RS03945	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS03945	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS03965	PWY-2201	folate transformations I
AMK58_RS04095	PWY-6871	3-methylbutanol biosynthesis
AMK58_RS04135	PWY-2661	trehalose biosynthesis V
AMK58_RS04135	PWY-6902	chitin degradation II
AMK58_RS04140	PWY-5941	glycogen degradation II (eukaryotic)
AMK58_RS04140	PWY-6724	starch degradation II
AMK58_RS04140	PWY-6737	starch degradation V
AMK58_RS04140	PWY-7238	sucrose biosynthesis II
AMK58_RS04220	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK58_RS04220	PWY-6416	quinate degradation II
AMK58_RS04220	PWY-6707	gallate biosynthesis
AMK58_RS04305	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AMK58_RS04305	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AMK58_RS04455	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS04455	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK58_RS04455	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK58_RS04455	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS04455	PWY-5723	Rubisco shunt
AMK58_RS04455	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS04455	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS04455	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS04455	PWY-7003	glycerol degradation to butanol
AMK58_RS04455	PWY-7124	ethylene biosynthesis V (engineered)
AMK58_RS04455	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK58_RS04475	PWY-7158	L-phenylalanine degradation V
AMK58_RS04485	PWY-2722	trehalose degradation IV
AMK58_RS04485	PWY-2723	trehalose degradation V
AMK58_RS04485	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK58_RS04485	PWY-5661	GDP-glucose biosynthesis
AMK58_RS04485	PWY-621	sucrose degradation III (sucrose invertase)
AMK58_RS04485	PWY-7238	sucrose biosynthesis II
AMK58_RS04485	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK58_RS04515	PWY-6728	methylaspartate cycle
AMK58_RS04515	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS04515	PWY-7118	chitin degradation to ethanol
AMK58_RS04515	PWY-7294	xylose degradation IV
AMK58_RS04515	PWY-7295	L-arabinose degradation IV
AMK58_RS04575	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS04575	PWY-7274	D-cycloserine biosynthesis
AMK58_RS04580	PWY-3081	L-lysine biosynthesis V
AMK58_RS04580	PWY-6871	3-methylbutanol biosynthesis
AMK58_RS04580	PWY-7710	AMK58_RS04580
AMK58_RS04585	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS04585	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK58_RS04585	PWY-6892	thiazole biosynthesis I (E. coli)
AMK58_RS04585	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK58_RS04720	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS04720	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK58_RS04720	PWY-6892	thiazole biosynthesis I (E. coli)
AMK58_RS04720	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK58_RS04750	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS04825	PWY-6826	phosphatidylcholine biosynthesis VI
AMK58_RS04905	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS04905	PWY-7274	D-cycloserine biosynthesis
AMK58_RS04915	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS04915	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK58_RS04915	PWY-6892	thiazole biosynthesis I (E. coli)
AMK58_RS04915	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK58_RS05100	PWY-5392	reductive TCA cycle II
AMK58_RS05100	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK58_RS05100	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS05100	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS05100	PWY-6728	methylaspartate cycle
AMK58_RS05100	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS05100	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS05100	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS05125	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK58_RS05125	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK58_RS05135	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS05135	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK58_RS05135	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS05135	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK58_RS05165	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK58_RS05165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS05165	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK58_RS05165	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK58_RS05215	PWY-3341	L-proline biosynthesis III
AMK58_RS05215	PWY-4981	L-proline biosynthesis II (from arginine)
AMK58_RS05215	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMK58_RS05255	PWY-6700	queuosine biosynthesis
AMK58_RS05260	PWY-6700	queuosine biosynthesis
AMK58_RS05265	PWY-6700	queuosine biosynthesis
AMK58_RS05270	PWY-6700	queuosine biosynthesis
AMK58_RS05310	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMK58_RS05310	PWY-7118	chitin degradation to ethanol
AMK58_RS05370	PWY-5958	acridone alkaloid biosynthesis
AMK58_RS05370	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK58_RS05370	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK58_RS05400	PWY-6654	phosphopantothenate biosynthesis III
AMK58_RS05435	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK58_RS05435	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK58_RS05435	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS05435	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS05435	PWY-702	L-methionine biosynthesis II
AMK58_RS05510	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMK58_RS05520	PWY-5101	L-isoleucine biosynthesis II
AMK58_RS05520	PWY-5103	L-isoleucine biosynthesis III
AMK58_RS05520	PWY-5104	L-isoleucine biosynthesis IV
AMK58_RS05520	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK58_RS05520	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK58_RS05520	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK58_RS05520	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK58_RS05525	PWY-5101	L-isoleucine biosynthesis II
AMK58_RS05525	PWY-5103	L-isoleucine biosynthesis III
AMK58_RS05525	PWY-5104	L-isoleucine biosynthesis IV
AMK58_RS05525	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK58_RS05525	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK58_RS05525	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK58_RS05525	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK58_RS05530	PWY-5103	L-isoleucine biosynthesis III
AMK58_RS05530	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK58_RS05600	PWY-6556	pyrimidine ribonucleosides salvage II
AMK58_RS05600	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK58_RS05600	PWY-7193	pyrimidine ribonucleosides salvage I
AMK58_RS05600	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK58_RS05605	PWY-4202	arsenate detoxification I (glutaredoxin)
AMK58_RS05605	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK58_RS05605	PWY-6608	guanosine nucleotides degradation III
AMK58_RS05605	PWY-6609	adenine and adenosine salvage III
AMK58_RS05605	PWY-6611	adenine and adenosine salvage V
AMK58_RS05605	PWY-6620	guanine and guanosine salvage
AMK58_RS05605	PWY-6627	salinosporamide A biosynthesis
AMK58_RS05605	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AMK58_RS05605	PWY-7179	purine deoxyribonucleosides degradation I
AMK58_RS05605	PWY-7179-1	purine deoxyribonucleosides degradation
AMK58_RS05610	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK58_RS05615	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK58_RS05675	PWY-5941	glycogen degradation II (eukaryotic)
AMK58_RS05675	PWY-6724	starch degradation II
AMK58_RS05675	PWY-6737	starch degradation V
AMK58_RS05675	PWY-7238	sucrose biosynthesis II
AMK58_RS05715	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK58_RS05715	PWY-5723	Rubisco shunt
AMK58_RS05800	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS05800	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK58_RS05800	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS05800	PWY-5723	Rubisco shunt
AMK58_RS05800	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS05800	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS05800	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS05800	PWY-7003	glycerol degradation to butanol
AMK58_RS05800	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK58_RS05800	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS05970	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMK58_RS05985	PWY-6614	tetrahydrofolate biosynthesis
AMK58_RS05990	PWY-6749	CMP-legionaminate biosynthesis I
AMK58_RS05995	PWY-6910	hydroxymethylpyrimidine salvage
AMK58_RS05995	PWY-7356	thiamin salvage IV (yeast)
AMK58_RS05995	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMK58_RS06050	PWY-381	nitrate reduction II (assimilatory)
AMK58_RS06050	PWY-5675	nitrate reduction V (assimilatory)
AMK58_RS06050	PWY-6549	L-glutamine biosynthesis III
AMK58_RS06050	PWY-6963	ammonia assimilation cycle I
AMK58_RS06050	PWY-6964	ammonia assimilation cycle II
AMK58_RS06070	PWY-6938	NADH repair
AMK58_RS06175	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS06175	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK58_RS06175	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK58_RS06175	PWY-6692	Fe(II) oxidation
AMK58_RS06180	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS06180	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK58_RS06180	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK58_RS06180	PWY-6692	Fe(II) oxidation
AMK58_RS06195	PWY-3961	phosphopantothenate biosynthesis II
AMK58_RS06205	PWY-5741	ethylmalonyl-CoA pathway
AMK58_RS06205	PWY-5743	3-hydroxypropanoate cycle
AMK58_RS06205	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK58_RS06205	PWY-6728	methylaspartate cycle
AMK58_RS06205	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS06290	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK58_RS06290	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK58_RS06295	PWY-7294	xylose degradation IV
AMK58_RS06295	PWY-7295	L-arabinose degradation IV
AMK58_RS06295	PWY-7560	methylerythritol phosphate pathway II
AMK58_RS06315	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK58_RS06315	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK58_RS06315	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK58_RS06315	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK58_RS06315	PWY-6113	superpathway of mycolate biosynthesis
AMK58_RS06315	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK58_RS06315	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK58_RS06315	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS06315	PWY-7663	gondoate biosynthesis (anaerobic)
AMK58_RS06315	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK58_RS06315	PWYG-321	mycolate biosynthesis
AMK58_RS06330	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK58_RS06330	PWY-622	starch biosynthesis
AMK58_RS06335	PWY-5386	methylglyoxal degradation I
AMK58_RS06365	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS06380	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS06405	PWY-5958	acridone alkaloid biosynthesis
AMK58_RS06405	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK58_RS06405	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK58_RS06430	PWY-5958	acridone alkaloid biosynthesis
AMK58_RS06430	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK58_RS06430	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK58_RS06440	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS06440	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS06440	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS06440	PWY-7003	glycerol degradation to butanol
AMK58_RS06450	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMK58_RS06450	PWY-7177	UTP and CTP dephosphorylation II
AMK58_RS06450	PWY-7185	UTP and CTP dephosphorylation I
AMK58_RS06460	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK58_RS06460	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK58_RS06470	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS06480	PWY-6420	pyrroloquinoline quinone biosynthesis
AMK58_RS06495	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS06495	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK58_RS06495	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK58_RS06495	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS06495	PWY-5723	Rubisco shunt
AMK58_RS06495	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS06495	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS06495	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS06495	PWY-7003	glycerol degradation to butanol
AMK58_RS06495	PWY-7124	ethylene biosynthesis V (engineered)
AMK58_RS06495	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK58_RS06530	PWY-5028	L-histidine degradation II
AMK58_RS06530	PWY-5030	L-histidine degradation III
AMK58_RS06680	PWY-2681	<i>trans</i>-zeatin biosynthesis
AMK58_RS06705	PWY-5344	L-homocysteine biosynthesis
AMK58_RS06705	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMK58_RS06735	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS06735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS06785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS06885	PWY-6654	phosphopantothenate biosynthesis III
AMK58_RS06920	PWY-6695	oxalate degradation II
AMK58_RS06920	PWY-6696	oxalate degradation III
AMK58_RS06925	PWY-6695	oxalate degradation II
AMK58_RS06930	PWY-5392	reductive TCA cycle II
AMK58_RS06930	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS06930	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS06930	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS06930	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS06930	PWY-6728	methylaspartate cycle
AMK58_RS06930	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS06930	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS06935	PWY-5392	reductive TCA cycle II
AMK58_RS06935	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS06935	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS06935	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS06935	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS06935	PWY-6728	methylaspartate cycle
AMK58_RS06935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS06935	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS06955	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AMK58_RS06985	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMK58_RS06985	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMK58_RS06985	PWY-6897	thiamin salvage II
AMK58_RS06985	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMK58_RS06985	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMK58_RS06985	PWY-7356	thiamin salvage IV (yeast)
AMK58_RS06985	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMK58_RS06995	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS06995	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK58_RS06995	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS06995	PWY-5723	Rubisco shunt
AMK58_RS06995	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS06995	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS06995	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS06995	PWY-7003	glycerol degradation to butanol
AMK58_RS06995	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK58_RS06995	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS07005	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK58_RS07005	PWY-6549	L-glutamine biosynthesis III
AMK58_RS07005	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK58_RS07005	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK58_RS07060	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS07060	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK58_RS07060	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMK58_RS07060	PWY-6596	adenosine nucleotides degradation I
AMK58_RS07060	PWY-6606	guanosine nucleotides degradation II
AMK58_RS07060	PWY-6607	guanosine nucleotides degradation I
AMK58_RS07060	PWY-6608	guanosine nucleotides degradation III
AMK58_RS07060	PWY-6999	theophylline degradation
AMK58_RS07065	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS07065	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK58_RS07065	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMK58_RS07065	PWY-6596	adenosine nucleotides degradation I
AMK58_RS07065	PWY-6606	guanosine nucleotides degradation II
AMK58_RS07065	PWY-6607	guanosine nucleotides degradation I
AMK58_RS07065	PWY-6608	guanosine nucleotides degradation III
AMK58_RS07065	PWY-6999	theophylline degradation
AMK58_RS07075	PWY-5704	urea degradation II
AMK58_RS07080	PWY-5704	urea degradation II
AMK58_RS07085	PWY-5704	urea degradation II
AMK58_RS07090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS07090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS07120	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK58_RS07120	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK58_RS07120	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK58_RS07120	PWY-6113	superpathway of mycolate biosynthesis
AMK58_RS07120	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK58_RS07120	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK58_RS07120	PWY-7663	gondoate biosynthesis (anaerobic)
AMK58_RS07120	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK58_RS07120	PWYG-321	mycolate biosynthesis
AMK58_RS07185	PWY-43	putrescine biosynthesis II
AMK58_RS07225	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK58_RS07225	PWY-622	starch biosynthesis
AMK58_RS07325	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK58_RS07325	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK58_RS07325	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK58_RS07325	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK58_RS07365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS07400	PWY-4381	fatty acid biosynthesis initiation I
AMK58_RS07400	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMK58_RS07400	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS07405	PWY-5367	petroselinate biosynthesis
AMK58_RS07405	PWY-5515	L-arabinose degradation II
AMK58_RS07405	PWY-5525	D-glucuronate degradation I
AMK58_RS07405	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK58_RS07405	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK58_RS07405	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK58_RS07405	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK58_RS07405	PWY-6113	superpathway of mycolate biosynthesis
AMK58_RS07405	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK58_RS07405	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK58_RS07405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS07405	PWY-7663	gondoate biosynthesis (anaerobic)
AMK58_RS07405	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK58_RS07405	PWYG-321	mycolate biosynthesis
AMK58_RS07435	PWY-2941	L-lysine biosynthesis II
AMK58_RS07435	PWY-2942	L-lysine biosynthesis III
AMK58_RS07435	PWY-5097	L-lysine biosynthesis VI
AMK58_RS07445	PWY-6825	phosphatidylcholine biosynthesis V
AMK58_RS07460	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS07460	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK58_RS07470	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK58_RS07470	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK58_RS07470	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMK58_RS07655	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS07700	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMK58_RS07785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK58_RS07785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK58_RS07790	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS07790	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS07790	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS07790	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMK58_RS07790	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK58_RS07790	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK58_RS07835	PWY-43	putrescine biosynthesis II
AMK58_RS07860	PWY-381	nitrate reduction II (assimilatory)
AMK58_RS07860	PWY-5675	nitrate reduction V (assimilatory)
AMK58_RS07860	PWY-6549	L-glutamine biosynthesis III
AMK58_RS07860	PWY-6963	ammonia assimilation cycle I
AMK58_RS07860	PWY-6964	ammonia assimilation cycle II
AMK58_RS07950	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS07960	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS07970	PWY-5269	cardiolipin biosynthesis II
AMK58_RS07970	PWY-5668	cardiolipin biosynthesis I
AMK58_RS08025	PWY-5392	reductive TCA cycle II
AMK58_RS08025	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK58_RS08025	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS08025	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS08025	PWY-6728	methylaspartate cycle
AMK58_RS08025	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS08025	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS08025	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS08105	PWY-5443	aminopropanol phosphate biosynthesis I
AMK58_RS08130	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMK58_RS08130	PWY-5389	3-methylthiopropanoate biosynthesis
AMK58_RS08190	PWY-5278	sulfite oxidation III
AMK58_RS08190	PWY-5340	sulfate activation for sulfonation
AMK58_RS08190	PWY-6683	sulfate reduction III (assimilatory)
AMK58_RS08190	PWY-6932	selenate reduction
AMK58_RS08205	PWY-5194	siroheme biosynthesis
AMK58_RS08205	PWY-5441	S-methyl-L-methionine cycle
AMK58_RS08205	PWY-702	L-methionine biosynthesis II
AMK58_RS08205	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK58_RS08210	PWY-5194	siroheme biosynthesis
AMK58_RS08210	PWY-5441	S-methyl-L-methionine cycle
AMK58_RS08210	PWY-702	L-methionine biosynthesis II
AMK58_RS08210	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK58_RS08220	PWY-6683	sulfate reduction III (assimilatory)
AMK58_RS08260	PWY-4381	fatty acid biosynthesis initiation I
AMK58_RS08300	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMK58_RS08300	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMK58_RS08300	PWY-6896	thiamin salvage I
AMK58_RS08300	PWY-6897	thiamin salvage II
AMK58_RS08310	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS08310	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS08315	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS08315	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS08315	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK58_RS08320	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS08320	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS08320	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS08325	PWY-5525	D-glucuronate degradation I
AMK58_RS08335	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK58_RS08335	PWY-181	photorespiration
AMK58_RS08335	PWY-2161	folate polyglutamylation
AMK58_RS08335	PWY-2201	folate transformations I
AMK58_RS08335	PWY-3661	glycine betaine degradation I
AMK58_RS08335	PWY-3661-1	glycine betaine degradation II (mammalian)
AMK58_RS08335	PWY-3841	folate transformations II
AMK58_RS08335	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS08400	PWY-6019	pseudouridine degradation
AMK58_RS08510	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK58_RS08510	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK58_RS08510	PWY-6268	adenosylcobalamin salvage from cobalamin
AMK58_RS08510	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK58_RS08515	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK58_RS08515	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK58_RS08515	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK58_RS08585	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMK58_RS08595	PWY-5381	pyridine nucleotide cycling (plants)
AMK58_RS08605	PWY-4081	glutathione redox reactions I
AMK58_RS08620	PWY-6164	3-dehydroquinate biosynthesis I
AMK58_RS08665	PWY-181	photorespiration
AMK58_RS08670	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK58_RS08670	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK58_RS08670	PWY-6453	stigma estolide biosynthesis
AMK58_RS08670	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMK58_RS08670	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMK58_RS08675	PWY-6749	CMP-legionaminate biosynthesis I
AMK58_RS08780	PWY-723	alkylnitronates degradation
AMK58_RS08800	PWY-2201	folate transformations I
AMK58_RS08800	PWY-3841	folate transformations II
AMK58_RS08810	PWY-2201	folate transformations I
AMK58_RS08810	PWY-3841	folate transformations II
AMK58_RS08870	PWY-5941	glycogen degradation II (eukaryotic)
AMK58_RS08870	PWY-6724	starch degradation II
AMK58_RS08870	PWY-6737	starch degradation V
AMK58_RS08870	PWY-7238	sucrose biosynthesis II
AMK58_RS08885	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK58_RS08885	PWY-622	starch biosynthesis
AMK58_RS08890	PWY-2622	trehalose biosynthesis IV
AMK58_RS09110	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK58_RS09110	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK58_RS09205	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS09205	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS09240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK58_RS09240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK58_RS09240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK58_RS09335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK58_RS09335	PWY-5723	Rubisco shunt
AMK58_RS09335	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK58_RS09335	PWY-6892	thiazole biosynthesis I (E. coli)
AMK58_RS09335	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS09335	PWY-7560	methylerythritol phosphate pathway II
AMK58_RS09340	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS09340	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS09340	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS09340	PWY-7003	glycerol degradation to butanol
AMK58_RS09365	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMK58_RS09365	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMK58_RS09365	PWY-6897	thiamin salvage II
AMK58_RS09365	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMK58_RS09365	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMK58_RS09365	PWY-7356	thiamin salvage IV (yeast)
AMK58_RS09365	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMK58_RS09395	PWY-2301	<i>myo</i>-inositol biosynthesis
AMK58_RS09395	PWY-4702	phytate degradation I
AMK58_RS09395	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AMK58_RS09450	PWY-702	L-methionine biosynthesis II
AMK58_RS09535	PWY-3781	aerobic respiration I (cytochrome c)
AMK58_RS09535	PWY-4521	arsenite oxidation I (respiratory)
AMK58_RS09535	PWY-6692	Fe(II) oxidation
AMK58_RS09535	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK58_RS09630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS09670	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK58_RS09670	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK58_RS09670	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK58_RS09670	PWY-6113	superpathway of mycolate biosynthesis
AMK58_RS09670	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK58_RS09670	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK58_RS09670	PWY-7663	gondoate biosynthesis (anaerobic)
AMK58_RS09670	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK58_RS09670	PWYG-321	mycolate biosynthesis
AMK58_RS09680	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK58_RS09865	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS09865	PWY-5686	UMP biosynthesis
AMK58_RS09865	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS09890	PWY-4202	arsenate detoxification I (glutaredoxin)
AMK58_RS09890	PWY-4621	arsenate detoxification II (glutaredoxin)
AMK58_RS09910	PWY-5669	phosphatidylethanolamine biosynthesis I
AMK58_RS09915	PWY-5669	phosphatidylethanolamine biosynthesis I
AMK58_RS09940	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS09940	PWY-6549	L-glutamine biosynthesis III
AMK58_RS09940	PWY-6728	methylaspartate cycle
AMK58_RS09940	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS09940	PWY-7124	ethylene biosynthesis V (engineered)
AMK58_RS09940	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS09940	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK58_RS09970	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS09970	PWY-6549	L-glutamine biosynthesis III
AMK58_RS09970	PWY-6728	methylaspartate cycle
AMK58_RS09970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS09970	PWY-7124	ethylene biosynthesis V (engineered)
AMK58_RS09970	PWY-7254	TCA cycle VII (acetate-producers)
AMK58_RS09970	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK58_RS10275	PWY-5344	L-homocysteine biosynthesis
AMK58_RS10275	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMK58_RS10280	PWY-6840	homoglutathione biosynthesis
AMK58_RS10280	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMK58_RS10300	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS10565	PWY-6906	chitin derivatives degradation
AMK58_RS10565	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMK58_RS10565	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMK58_RS10685	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMK58_RS10685	PWY-7118	chitin degradation to ethanol
AMK58_RS10760	PWY-4041	&gamma;-glutamyl cycle
AMK58_RS10760	PWY-5826	hypoglycin biosynthesis
AMK58_RS10770	PWY-6840	homoglutathione biosynthesis
AMK58_RS10770	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMK58_RS10775	PWY-2201	folate transformations I
AMK58_RS10800	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMK58_RS10800	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMK58_RS10800	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMK58_RS10800	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMK58_RS10800	PWY-6978	plastoquinol-9 biosynthesis II
AMK58_RS10845	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMK58_RS10925	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS10925	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS10925	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK58_RS10925	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK58_RS10925	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS10925	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS10925	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS10925	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK58_RS10965	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMK58_RS10965	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS10965	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS10970	PWY-5686	UMP biosynthesis
AMK58_RS11005	PWY-3801	sucrose degradation II (sucrose synthase)
AMK58_RS11005	PWY-5054	sorbitol biosynthesis I
AMK58_RS11005	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMK58_RS11005	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK58_RS11005	PWY-5659	GDP-mannose biosynthesis
AMK58_RS11005	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS11005	PWY-621	sucrose degradation III (sucrose invertase)
AMK58_RS11005	PWY-622	starch biosynthesis
AMK58_RS11005	PWY-6981	chitin biosynthesis
AMK58_RS11005	PWY-6992	1,5-anhydrofructose degradation
AMK58_RS11005	PWY-7238	sucrose biosynthesis II
AMK58_RS11005	PWY-7347	sucrose biosynthesis III
AMK58_RS11005	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK58_RS11155	PWY-5367	petroselinate biosynthesis
AMK58_RS11155	PWY-5515	L-arabinose degradation II
AMK58_RS11155	PWY-5525	D-glucuronate degradation I
AMK58_RS11155	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK58_RS11155	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK58_RS11155	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK58_RS11155	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK58_RS11155	PWY-6113	superpathway of mycolate biosynthesis
AMK58_RS11155	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK58_RS11155	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK58_RS11155	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS11155	PWY-7663	gondoate biosynthesis (anaerobic)
AMK58_RS11155	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK58_RS11155	PWYG-321	mycolate biosynthesis
AMK58_RS11285	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS11285	PWY-6168	flavin biosynthesis III (fungi)
AMK58_RS11300	PWY-6825	phosphatidylcholine biosynthesis V
AMK58_RS11325	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK58_RS11325	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK58_RS11325	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK58_RS11340	PWY-5686	UMP biosynthesis
AMK58_RS11415	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK58_RS11415	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK58_RS11415	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS11415	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK58_RS11430	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK58_RS11430	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK58_RS11430	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK58_RS11435	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK58_RS11435	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK58_RS11435	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK58_RS11460	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK58_RS11460	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK58_RS11460	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK58_RS11465	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK58_RS11465	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK58_RS11465	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK58_RS11520	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMK58_RS11525	PWY-5101	L-isoleucine biosynthesis II
AMK58_RS11525	PWY-6871	3-methylbutanol biosynthesis
AMK58_RS11555	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK58_RS11560	PWY-5081	L-tryptophan degradation VIII (to tryptophol)
AMK58_RS11570	PWY-5381	pyridine nucleotide cycling (plants)
AMK58_RS11570	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMK58_RS11625	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK58_RS11680	PWY-3341	L-proline biosynthesis III
AMK58_RS11680	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK58_RS11710	PWY-3341	L-proline biosynthesis III
AMK58_RS11710	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK58_RS11715	PWY-5381	pyridine nucleotide cycling (plants)
AMK58_RS11715	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMK58_RS11725	PWY-6825	phosphatidylcholine biosynthesis V
AMK58_RS11730	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS11730	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK58_RS11730	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS11730	PWY-5723	Rubisco shunt
AMK58_RS11730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK58_RS11730	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS11730	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS11730	PWY-7003	glycerol degradation to butanol
AMK58_RS11730	PWY-7124	ethylene biosynthesis V (engineered)
AMK58_RS11730	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK58_RS11765	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS11775	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK58_RS11800	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK58_RS11800	PWY-5723	Rubisco shunt
AMK58_RS11815	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMK58_RS11815	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK58_RS11855	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK58_RS11855	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK58_RS11855	PWY-6936	seleno-amino acid biosynthesis
AMK58_RS11855	PWY-702	L-methionine biosynthesis II
AMK58_RS11880	PWY-1042	glycolysis IV (plant cytosol)
AMK58_RS11880	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK58_RS11880	PWY-6886	1-butanol autotrophic biosynthesis
AMK58_RS11880	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS11880	PWY-7003	glycerol degradation to butanol
AMK58_RS11910	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK58_RS11915	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMK58_RS11920	PWY-5381	pyridine nucleotide cycling (plants)
AMK58_RS12145	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK58_RS12145	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
AMK58_RS12245	PWY-6829	tRNA methylation (yeast)
AMK58_RS12245	PWY-7285	methylwyosine biosynthesis
AMK58_RS12245	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMK58_RS12310	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK58_RS12310	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK58_RS12310	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK58_RS12315	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK58_RS12315	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK58_RS12315	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK58_RS12385	PWY-5481	pyruvate fermentation to lactate
AMK58_RS12385	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AMK58_RS12385	PWY-6901	superpathway of glucose and xylose degradation
AMK58_RS12470	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS12470	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS12495	PWY-4381	fatty acid biosynthesis initiation I
AMK58_RS12495	PWY-5743	3-hydroxypropanoate cycle
AMK58_RS12495	PWY-5744	glyoxylate assimilation
AMK58_RS12495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK58_RS12495	PWY-6679	jadomycin biosynthesis
AMK58_RS12495	PWY-6722	candicidin biosynthesis
AMK58_RS12495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK58_RS12505	PWY-6728	methylaspartate cycle
AMK58_RS12505	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS12505	PWY-7118	chitin degradation to ethanol
AMK58_RS12505	PWY-7294	xylose degradation IV
AMK58_RS12505	PWY-7295	L-arabinose degradation IV
AMK58_RS12525	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK58_RS12530	PWY-6164	3-dehydroquinate biosynthesis I
AMK58_RS12560	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMK58_RS12570	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMK58_RS12595	PWY-7183	pyrimidine nucleobases salvage I
AMK58_RS12610	PWY-5686	UMP biosynthesis
AMK58_RS12650	PWY-7205	CMP phosphorylation
AMK58_RS12655	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK58_RS12660	PWY-4041	&gamma;-glutamyl cycle
AMK58_RS12660	PWY-5826	hypoglycin biosynthesis
AMK58_RS12685	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS12690	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS12780	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMK58_RS12780	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMK58_RS12890	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS12985	PWY-6749	CMP-legionaminate biosynthesis I
AMK58_RS13255	PWY-5686	UMP biosynthesis
AMK58_RS13275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS13295	PWY-5392	reductive TCA cycle II
AMK58_RS13295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS13355	PWY-2201	folate transformations I
AMK58_RS13355	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK58_RS13355	PWY-6167	flavin biosynthesis II (archaea)
AMK58_RS13540	PWY-6823	molybdenum cofactor biosynthesis
AMK58_RS13795	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK58_RS13810	PWY-3841	folate transformations II
AMK58_RS13810	PWY-6614	tetrahydrofolate biosynthesis
AMK58_RS13840	PWY-2201	folate transformations I
AMK58_RS14540	PWY-5392	reductive TCA cycle II
AMK58_RS14540	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS14540	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS14540	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS14540	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS14540	PWY-6728	methylaspartate cycle
AMK58_RS14540	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS14540	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS15320	PWY-2161	folate polyglutamylation
AMK58_RS17645	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMK58_RS17705	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK58_RS17705	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK58_RS17850	PWY-6871	3-methylbutanol biosynthesis
AMK58_RS20585	PWY-5392	reductive TCA cycle II
AMK58_RS20585	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS20585	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS20585	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS20585	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS20585	PWY-6728	methylaspartate cycle
AMK58_RS20585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS20585	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS20990	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK58_RS22345	PWY-5839	menaquinol-7 biosynthesis
AMK58_RS22345	PWY-5844	menaquinol-9 biosynthesis
AMK58_RS22345	PWY-5849	menaquinol-6 biosynthesis
AMK58_RS22345	PWY-5890	menaquinol-10 biosynthesis
AMK58_RS22345	PWY-5891	menaquinol-11 biosynthesis
AMK58_RS22345	PWY-5892	menaquinol-12 biosynthesis
AMK58_RS22345	PWY-5895	menaquinol-13 biosynthesis
AMK58_RS22565	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS22565	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS22565	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS22565	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK58_RS23515	PWY-5022	4-aminobutanoate degradation V
AMK58_RS23515	PWY-6728	methylaspartate cycle
AMK58_RS23515	PWY-7126	ethylene biosynthesis IV
AMK58_RS23525	PWY-5022	4-aminobutanoate degradation V
AMK58_RS23525	PWY-6728	methylaspartate cycle
AMK58_RS23525	PWY-7126	ethylene biosynthesis IV
AMK58_RS23875	PWY-5392	reductive TCA cycle II
AMK58_RS23875	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS23875	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS23875	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS23875	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS23875	PWY-6728	methylaspartate cycle
AMK58_RS23875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS23875	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK58_RS23970	PWY-2941	L-lysine biosynthesis II
AMK58_RS23970	PWY-2942	L-lysine biosynthesis III
AMK58_RS23970	PWY-5097	L-lysine biosynthesis VI
AMK58_RS23970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS23970	PWY-6559	spermidine biosynthesis II
AMK58_RS23970	PWY-6562	norspermidine biosynthesis
AMK58_RS23970	PWY-7153	grixazone biosynthesis
AMK58_RS23970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS24240	PWY-5686	UMP biosynthesis
AMK58_RS25050	PWY-6834	spermidine biosynthesis III
AMK58_RS25925	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK58_RS25925	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK58_RS25925	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK58_RS25925	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK58_RS26175	PWY-622	starch biosynthesis
AMK58_RS26245	PWY-4983	L-citrulline-nitric oxide cycle
AMK58_RS26245	PWY-4984	urea cycle
AMK58_RS26245	PWY-5	canavanine biosynthesis
AMK58_RS26245	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK58_RS26245	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK58_RS27025	PWY-5022	4-aminobutanoate degradation V
AMK58_RS27025	PWY-6728	methylaspartate cycle
AMK58_RS27025	PWY-7126	ethylene biosynthesis IV
AMK58_RS27395	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMK58_RS28585	PWY-5392	reductive TCA cycle II
AMK58_RS28585	PWY-5537	pyruvate fermentation to acetate V
AMK58_RS28585	PWY-5538	pyruvate fermentation to acetate VI
AMK58_RS28585	PWY-5690	TCA cycle II (plants and fungi)
AMK58_RS28585	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK58_RS28585	PWY-6728	methylaspartate cycle
AMK58_RS28585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK58_RS28585	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
