AMK58_RS00005 PF08335 GlnD PII-uridylyltransferase AMK58_RS00015 PF13369 AMK58_RS00015 AMK58_RS00020 PF02021 Uncharacterised protein family UPF0102 AMK58_RS00030 PF13458 Periplasmic binding protein AMK58_RS00040 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS00045 PF13466 STAS domain AMK58_RS00055 PF00488 MutS domain V AMK58_RS00055 PF01624 MutS domain I AMK58_RS00055 PF05188 MutS domain II AMK58_RS00055 PF05190 MutS family domain IV AMK58_RS00055 PF05192 MutS domain III AMK58_RS00070 PF01909 Nucleotidyltransferase domain AMK58_RS00070 PF01966 HD domain AMK58_RS00070 PF08335 GlnD PII-uridylyltransferase AMK58_RS00075 PF01569 PAP2 superfamily AMK58_RS00080 PF04796 AMK58_RS00080 AMK58_RS00090 PF13458 Periplasmic binding protein AMK58_RS00095 PF00072 Response regulator receiver domain AMK58_RS00095 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS00095 PF13426 PAS domain AMK58_RS00100 PF03023 AMK58_RS00100 AMK58_RS00105 PF00579 tRNA synthetases class I (W and Y) AMK58_RS00110 PF01470 Pyroglutamyl peptidase AMK58_RS00115 PF03692 AMK58_RS00115 AMK58_RS00120 PF02810 SEC-C motif AMK58_RS00125 PF13463 Winged helix DNA-binding domain AMK58_RS00135 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS00140 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS00145 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS00150 PF10129 AMK58_RS00150 AMK58_RS00155 PF00561 alpha/beta hydrolase fold AMK58_RS00160 PF01564 Spermine/spermidine synthase AMK58_RS00165 PF02675 S-adenosylmethionine decarboxylase AMK58_RS00170 PF07722 Peptidase C26 AMK58_RS00175 PF01047 MarR family AMK58_RS00180 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK58_RS00185 PF03372 Endonuclease/Exonuclease/phosphatase family AMK58_RS00190 PF00300 Histidine phosphatase superfamily (branch 1) AMK58_RS00195 PF00534 Glycosyl transferases group 1 AMK58_RS00200 PF00990 GGDEF domain AMK58_RS00200 PF13426 PAS domain AMK58_RS00205 PF00534 Glycosyl transferases group 1 AMK58_RS00215 PF00005 ABC transporter AMK58_RS00215 PF00664 ABC transporter transmembrane region AMK58_RS00220 PF00027 Cyclic nucleotide-binding domain AMK58_RS00225 PF04101 Glycosyltransferase family 28 C-terminal domain AMK58_RS00240 PF00005 ABC transporter AMK58_RS00240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS00245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00255 PF12911 AMK58_RS00255 AMK58_RS00260 PF05951 AMK58_RS00260 AMK58_RS00265 PF12706 Beta-lactamase superfamily domain AMK58_RS00275 PF07995 Glucose / Sorbosone dehydrogenase AMK58_RS00285 PF00072 Response regulator receiver domain AMK58_RS00285 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS00290 PF00925 GTP cyclohydrolase II AMK58_RS00300 PF03734 L,D-transpeptidase catalytic domain AMK58_RS00305 PF01168 Alanine racemase, N-terminal domain AMK58_RS00315 PF13609 Gram-negative porin AMK58_RS00320 PF13609 Gram-negative porin AMK58_RS00325 PF12100 AMK58_RS00325 AMK58_RS00330 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS00330 PF08264 Anticodon-binding domain of tRNA AMK58_RS00330 PF13603 Leucyl-tRNA synthetase, Domain 2 AMK58_RS00335 PF04390 Lipopolysaccharide-assembly AMK58_RS00345 PF13449 Esterase-like activity of phytase AMK58_RS00350 PF02195 ParB-like nuclease domain AMK58_RS00355 PF13614 AAA domain AMK58_RS00360 PF02527 rRNA small subunit methyltransferase G AMK58_RS00365 PF01134 Glucose inhibited division protein A AMK58_RS00365 PF13932 GidA associated domain 3 AMK58_RS00370 PF01926 50S ribosome-binding GTPase AMK58_RS00370 PF10396 GTP-binding protein TrmE N-terminus AMK58_RS00370 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AMK58_RS00385 PF03190 Protein of unknown function, DUF255 AMK58_RS00385 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AMK58_RS00390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK58_RS00395 PF00107 Zinc-binding dehydrogenase AMK58_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS00400 PF00929 Exonuclease AMK58_RS00405 PF01121 Dephospho-CoA kinase AMK58_RS00410 PF01488 Shikimate / quinate 5-dehydrogenase AMK58_RS00410 PF08501 Shikimate dehydrogenase substrate binding domain AMK58_RS00415 PF02545 Maf-like protein AMK58_RS00420 PF03618 AMK58_RS00420 AMK58_RS00425 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMK58_RS00430 PF03653 AMK58_RS00430 AMK58_RS00435 PF04014 Antidote-toxin recognition MazE AMK58_RS00440 PF02661 Fic/DOC family AMK58_RS00445 PF00122 E1-E2 ATPase AMK58_RS00445 PF00689 Cation transporting ATPase, C-terminus AMK58_RS00445 PF00690 Cation transporter/ATPase, N-terminus AMK58_RS00445 PF00702 haloacid dehalogenase-like hydrolase AMK58_RS00450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS00450 PF07497 Rho termination factor, RNA-binding domain AMK58_RS00450 PF07498 Rho termination factor, N-terminal domain AMK58_RS00455 PF02556 Preprotein translocase subunit SecB AMK58_RS00460 PF04186 AMK58_RS00460 AMK58_RS00465 PF04280 Tim44-like domain AMK58_RS00470 PF03562 MltA specific insert domain AMK58_RS00470 PF06725 3D domain AMK58_RS00475 PF06724 AMK58_RS00475 AMK58_RS00480 PF01230 HIT domain AMK58_RS00485 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMK58_RS00490 PF00977 Histidine biosynthesis protein AMK58_RS00495 PF00977 Histidine biosynthesis protein AMK58_RS00500 PF00583 Acetyltransferase (GNAT) family AMK58_RS00505 PF00117 Glutamine amidotransferase class-I AMK58_RS00510 PF00475 Imidazoleglycerol-phosphate dehydratase AMK58_RS00520 PF00227 Proteasome subunit AMK58_RS00525 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS00525 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS00525 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS00530 PF00005 ABC transporter AMK58_RS00535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS00535 PF00989 PAS fold AMK58_RS00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS00540 PF12844 Helix-turn-helix domain AMK58_RS00545 PF01713 Smr domain AMK58_RS00550 PF02589 Uncharacterised ACR, YkgG family COG1556 AMK58_RS00555 PF02589 Uncharacterised ACR, YkgG family COG1556 AMK58_RS00555 PF11870 AMK58_RS00555 AMK58_RS00555 PF13183 4Fe-4S dicluster domain AMK58_RS00560 PF02754 AMK58_RS00560 AMK58_RS00565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS00565 PF08447 PAS fold AMK58_RS00570 PF01810 AMK58_RS00570 AMK58_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS00575 PF03466 LysR substrate binding domain AMK58_RS00580 PF00950 AMK58_RS00580 AMK58_RS00585 PF00005 ABC transporter AMK58_RS00590 PF01297 Periplasmic solute binding protein family AMK58_RS00595 PF01113 Dihydrodipicolinate reductase, N-terminus AMK58_RS00595 PF05173 Dihydrodipicolinate reductase, C-terminus AMK58_RS00600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK58_RS00600 PF12833 Helix-turn-helix domain AMK58_RS00605 PF10003 AMK58_RS00605 AMK58_RS00610 PF00633 Helix-hairpin-helix motif AMK58_RS00610 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS00610 PF10576 Iron-sulfur binding domain of endonuclease III AMK58_RS00615 PF04519 AMK58_RS00615 AMK58_RS00620 PF07264 Etoposide-induced protein 2 AMK58_RS00625 PF00294 pfkB family carbohydrate kinase AMK58_RS00630 PF01925 AMK58_RS00630 AMK58_RS00635 PF09608 AMK58_RS00635 AMK58_RS00640 PF00582 Universal stress protein family AMK58_RS00645 PF01564 Spermine/spermidine synthase AMK58_RS00650 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS00655 PF01106 NifU-like domain AMK58_RS00655 PF08712 Scaffold protein Nfu/NifU N terminal AMK58_RS00660 PF01522 Polysaccharide deacetylase AMK58_RS00665 PF01427 D-ala-D-ala dipeptidase AMK58_RS00670 PF00814 Glycoprotease family AMK58_RS00675 PF00583 Acetyltransferase (GNAT) family AMK58_RS00680 PF01206 Sulfurtransferase TusA AMK58_RS00685 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS00690 PF13444 Acetyltransferase (GNAT) domain AMK58_RS00695 PF01553 Acyltransferase AMK58_RS00700 PF00919 Uncharacterized protein family UPF0004 AMK58_RS00700 PF01938 TRAM domain AMK58_RS00700 PF04055 Radical SAM superfamily AMK58_RS00705 PF02562 PhoH-like protein AMK58_RS00710 PF02130 Uncharacterized protein family UPF0054 AMK58_RS00715 PF00571 CBS domain AMK58_RS00715 PF03471 Transporter associated domain AMK58_RS00720 PF00795 Carbon-nitrogen hydrolase AMK58_RS00725 PF01381 Helix-turn-helix AMK58_RS00730 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMK58_RS00730 PF02772 S-adenosylmethionine synthetase, central domain AMK58_RS00730 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMK58_RS00735 PF02390 Putative methyltransferase AMK58_RS00740 PF03992 Antibiotic biosynthesis monooxygenase AMK58_RS00745 PF02576 Uncharacterised BCR, YhbC family COG0779 AMK58_RS00750 PF00575 S1 RNA binding domain AMK58_RS00750 PF08529 NusA N-terminal domain AMK58_RS00750 PF13184 NusA-like KH domain AMK58_RS00750 PF14520 Helix-hairpin-helix domain AMK58_RS00755 PF04296 Protein of unknown function (DUF448) AMK58_RS00760 PF00009 Elongation factor Tu GTP binding domain AMK58_RS00760 PF04760 Translation initiation factor IF-2, N-terminal region AMK58_RS00760 PF08364 AMK58_RS00760 AMK58_RS00760 PF11987 Translation-initiation factor 2 AMK58_RS00765 PF02033 Ribosome-binding factor A AMK58_RS00770 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMK58_RS00770 PF16198 AMK58_RS00770 AMK58_RS00775 PF00312 Ribosomal protein S15 AMK58_RS00780 PF00013 KH domain AMK58_RS00780 PF00575 S1 RNA binding domain AMK58_RS00780 PF01138 3' exoribonuclease family, domain 1 AMK58_RS00780 PF03725 3' exoribonuclease family, domain 2 AMK58_RS00780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMK58_RS00790 PF04228 AMK58_RS00790 AMK58_RS00795 PF03073 TspO/MBR family AMK58_RS00800 PF04055 Radical SAM superfamily AMK58_RS00800 PF13353 4Fe-4S single cluster domain AMK58_RS00805 PF03009 Glycerophosphoryl diester phosphodiesterase family AMK58_RS00815 PF01475 Ferric uptake regulator family AMK58_RS00820 PF02915 Rubrerythrin AMK58_RS00825 PF12007 Protein of unknown function (DUF3501) AMK58_RS00830 PF06347 Bacterial SH3 domain AMK58_RS00835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK58_RS00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS00840 PF05685 Putative restriction endonuclease AMK58_RS00845 PF00583 Acetyltransferase (GNAT) family AMK58_RS00845 PF13380 CoA binding domain AMK58_RS00845 PF13549 ATP-grasp domain AMK58_RS00845 PF13607 Succinyl-CoA ligase like flavodoxin domain AMK58_RS00850 PF00056 lactate/malate dehydrogenase, NAD binding domain AMK58_RS00850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMK58_RS00855 PF00719 Inorganic pyrophosphatase AMK58_RS00860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS00865 PF13189 Cytidylate kinase-like family AMK58_RS00870 PF03109 AMK58_RS00870 AMK58_RS00875 PF01209 ubiE/COQ5 methyltransferase family AMK58_RS00880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMK58_RS00880 PF13432 Tetratricopeptide repeat AMK58_RS00885 PF13432 Tetratricopeptide repeat AMK58_RS00890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMK58_RS00890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMK58_RS00900 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS00905 PF01649 Ribosomal protein S20 AMK58_RS00910 PF00308 Bacterial dnaA protein AMK58_RS00910 PF08299 Bacterial dnaA protein helix-turn-helix AMK58_RS00910 PF11638 DnaA N-terminal domain AMK58_RS00915 PF13416 Bacterial extracellular solute-binding protein AMK58_RS00920 PF00005 ABC transporter AMK58_RS00920 PF08402 TOBE domain AMK58_RS00925 PF04234 CopC domain AMK58_RS00925 PF05425 AMK58_RS00925 AMK58_RS00930 PF07987 Domain of unkown function (DUF1775) AMK58_RS00935 PF11162 AMK58_RS00935 AMK58_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS00955 PF13279 Thioesterase-like superfamily AMK58_RS00960 PF00394 Multicopper oxidase AMK58_RS00960 PF07731 Multicopper oxidase AMK58_RS00960 PF07732 Multicopper oxidase AMK58_RS00965 PF05958 tRNA (Uracil-5-)-methyltransferase AMK58_RS00970 PF10672 S-adenosylmethionine-dependent methyltransferase AMK58_RS00980 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK58_RS00985 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO AMK58_RS00990 PF05545 AMK58_RS00990 AMK58_RS00995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS00995 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMK58_RS01000 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS01000 PF12801 AMK58_RS01000 AMK58_RS01000 PF13746 4Fe-4S dicluster domain AMK58_RS01005 PF05751 AMK58_RS01005 AMK58_RS01010 PF00122 E1-E2 ATPase AMK58_RS01010 PF00403 Heavy-metal-associated domain AMK58_RS01010 PF00702 haloacid dehalogenase-like hydrolase AMK58_RS01010 PF12156 AMK58_RS01010 AMK58_RS01015 PF00027 Cyclic nucleotide-binding domain AMK58_RS01015 PF13545 Crp-like helix-turn-helix domain AMK58_RS01020 PF00390 Malic enzyme, N-terminal domain AMK58_RS01020 PF01515 Phosphate acetyl/butaryl transferase AMK58_RS01020 PF03949 Malic enzyme, NAD binding domain AMK58_RS01025 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01030 PF12849 PBP superfamily domain AMK58_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01035 PF12501 AMK58_RS01035 AMK58_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01040 PF11812 AMK58_RS01040 AMK58_RS01045 PF00005 ABC transporter AMK58_RS01050 PF01895 PhoU domain AMK58_RS01055 PF00072 Response regulator receiver domain AMK58_RS01055 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS01065 PF02635 DsrE/DsrF-like family AMK58_RS01070 PF00899 ThiF family AMK58_RS01080 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS01085 PF02082 Transcriptional regulator AMK58_RS01090 PF00692 dUTPase AMK58_RS01095 PF02441 Flavoprotein AMK58_RS01095 PF04127 DNA / pantothenate metabolism flavoprotein AMK58_RS01100 PF00072 Response regulator receiver domain AMK58_RS01100 PF00158 Sigma-54 interaction domain AMK58_RS01100 PF02954 Bacterial regulatory protein, Fis family AMK58_RS01105 PF00313 'Cold-shock' DNA-binding domain AMK58_RS01110 PF00072 Response regulator receiver domain AMK58_RS01110 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01110 PF01627 Hpt domain AMK58_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01110 PF12860 AMK58_RS01110 AMK58_RS01110 PF13426 PAS domain AMK58_RS01115 PF00950 AMK58_RS01115 AMK58_RS01120 PF00950 AMK58_RS01120 AMK58_RS01125 PF00005 ABC transporter AMK58_RS01130 PF01297 Periplasmic solute binding protein family AMK58_RS01135 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AMK58_RS01145 PF12710 haloacid dehalogenase-like hydrolase AMK58_RS01155 PF01475 Ferric uptake regulator family AMK58_RS01160 PF01841 Transglutaminase-like superfamily AMK58_RS01160 PF08379 AMK58_RS01160 AMK58_RS01165 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01170 PF00183 Hsp90 protein AMK58_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01180 PF00271 Helicase conserved C-terminal domain AMK58_RS01185 PF01479 S4 domain AMK58_RS01190 PF03741 AMK58_RS01190 AMK58_RS01195 PF00571 CBS domain AMK58_RS01200 PF06080 AMK58_RS01200 AMK58_RS01205 PF06779 AMK58_RS01205 AMK58_RS01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01210 PF03466 LysR substrate binding domain AMK58_RS01215 PF00037 4Fe-4S binding domain AMK58_RS01215 PF11953 Domain of unknown function (DUF3470) AMK58_RS01220 PF02559 CarD-like/TRCF domain AMK58_RS01225 PF00561 alpha/beta hydrolase fold AMK58_RS01230 PF00565 Staphylococcal nuclease homologue AMK58_RS01235 PF01435 Peptidase family M48 AMK58_RS01240 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS01240 PF00672 HAMP domain AMK58_RS01245 PF04542 Sigma-70 region 2 AMK58_RS01245 PF04545 Sigma-70, region 4 AMK58_RS01255 PF01632 Ribosomal protein L35 AMK58_RS01260 PF00453 Ribosomal protein L20 AMK58_RS01265 PF01409 tRNA synthetases class II core domain (F) AMK58_RS01265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMK58_RS01270 PF01588 Putative tRNA binding domain AMK58_RS01270 PF03147 Ferredoxin-fold anticodon binding domain AMK58_RS01270 PF03483 B3/4 domain AMK58_RS01270 PF03484 tRNA synthetase B5 domain AMK58_RS01275 PF00072 Response regulator receiver domain AMK58_RS01280 PF00072 Response regulator receiver domain AMK58_RS01280 PF11849 AMK58_RS01280 AMK58_RS01280 PF13487 HD domain AMK58_RS01285 PF08239 Bacterial SH3 domain AMK58_RS01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01290 PF03466 LysR substrate binding domain AMK58_RS01300 PF00009 Elongation factor Tu GTP binding domain AMK58_RS01300 PF00679 Elongation factor G C-terminus AMK58_RS01300 PF03144 Elongation factor Tu domain 2 AMK58_RS01300 PF06421 GTP-binding protein LepA C-terminus AMK58_RS01305 PF05050 Methyltransferase FkbM domain AMK58_RS01310 PF00534 Glycosyl transferases group 1 AMK58_RS01310 PF08323 Starch synthase catalytic domain AMK58_RS01315 PF00483 Nucleotidyl transferase AMK58_RS01320 PF00909 Ammonium Transporter Family AMK58_RS01325 PF08242 Methyltransferase domain AMK58_RS01330 PF06445 GyrI-like small molecule binding domain AMK58_RS01330 PF12833 Helix-turn-helix domain AMK58_RS01335 PF06089 AMK58_RS01335 AMK58_RS01340 PF00588 SpoU rRNA Methylase family AMK58_RS01345 PF12973 ChrR Cupin-like domain AMK58_RS01350 PF04542 Sigma-70 region 2 AMK58_RS01350 PF04545 Sigma-70, region 4 AMK58_RS01360 PF04055 Radical SAM superfamily AMK58_RS01375 PF00764 Arginosuccinate synthase AMK58_RS01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS01380 PF00672 HAMP domain AMK58_RS01380 PF12729 AMK58_RS01380 AMK58_RS01385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS01390 PF00581 Rhodanese-like domain AMK58_RS01395 PF06803 AMK58_RS01395 AMK58_RS01400 PF00892 EamA-like transporter family AMK58_RS01405 PF13432 Tetratricopeptide repeat AMK58_RS01410 PF03918 Cytochrome C biogenesis protein AMK58_RS01415 PF08534 Redoxin AMK58_RS01420 PF01578 AMK58_RS01420 AMK58_RS01420 PF16327 AMK58_RS01420 AMK58_RS01425 PF03100 CcmE AMK58_RS01430 PF04995 AMK58_RS01430 AMK58_RS01435 PF01578 AMK58_RS01435 AMK58_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS01440 PF03466 LysR substrate binding domain AMK58_RS01445 PF06568 AMK58_RS01445 AMK58_RS01450 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMK58_RS01455 PF02146 Sir2 family AMK58_RS01460 PF03167 Uracil DNA glycosylase superfamily AMK58_RS01465 PF06262 Possibl zinc metallo-peptidase AMK58_RS01470 PF01329 Pterin 4 alpha carbinolamine dehydratase AMK58_RS01475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMK58_RS01475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMK58_RS01480 PF01544 CorA-like Mg2+ transporter protein AMK58_RS01485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMK58_RS01485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMK58_RS01490 PF02594 Uncharacterised ACR, YggU family COG1872 AMK58_RS01495 PF02325 AMK58_RS01495 AMK58_RS01505 PF00892 EamA-like transporter family AMK58_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01515 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS01525 PF00005 ABC transporter AMK58_RS01530 PF02080 TrkA-C domain AMK58_RS01530 PF06826 AMK58_RS01530 AMK58_RS01535 PF02080 TrkA-C domain AMK58_RS01535 PF06826 AMK58_RS01535 AMK58_RS01540 PF00005 ABC transporter AMK58_RS01545 PF03379 AMK58_RS01545 AMK58_RS01550 PF00085 Thioredoxin AMK58_RS01555 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS01555 PF12705 PD-(D/E)XK nuclease superfamily AMK58_RS01555 PF13361 UvrD-like helicase C-terminal domain AMK58_RS01565 PF12705 PD-(D/E)XK nuclease superfamily AMK58_RS01570 PF12804 MobA-like NTP transferase domain AMK58_RS01575 PF01636 Phosphotransferase enzyme family AMK58_RS01580 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMK58_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS01595 PF07813 LTXXQ motif family protein AMK58_RS01600 PF00072 Response regulator receiver domain AMK58_RS01600 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS01605 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01605 PF00672 HAMP domain AMK58_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS01615 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01615 PF12860 AMK58_RS01615 AMK58_RS01615 PF13188 PAS domain AMK58_RS01620 PF00072 Response regulator receiver domain AMK58_RS01620 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01620 PF00672 HAMP domain AMK58_RS01620 PF01627 Hpt domain AMK58_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01620 PF08448 PAS fold AMK58_RS01625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS01630 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS01635 PF00290 Tryptophan synthase alpha chain AMK58_RS01640 PF01039 Carboxyl transferase domain AMK58_RS01645 PF08245 Mur ligase middle domain AMK58_RS01660 PF00106 short chain dehydrogenase AMK58_RS01665 PF00174 Oxidoreductase molybdopterin binding domain AMK58_RS01670 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01675 PF01227 GTP cyclohydrolase I AMK58_RS01680 PF00892 EamA-like transporter family AMK58_RS01685 PF04073 Aminoacyl-tRNA editing domain AMK58_RS01690 PF00072 Response regulator receiver domain AMK58_RS01690 PF02954 Bacterial regulatory protein, Fis family AMK58_RS01695 PF01227 GTP cyclohydrolase I AMK58_RS01700 PF04379 Protein of unknown function (DUF525) AMK58_RS01705 PF00583 Acetyltransferase (GNAT) family AMK58_RS01720 PF02557 D-alanyl-D-alanine carboxypeptidase AMK58_RS01725 PF00112 Papain family cysteine protease AMK58_RS01730 PF00270 DEAD/DEAH box helicase AMK58_RS01730 PF00271 Helicase conserved C-terminal domain AMK58_RS01730 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS01730 PF13361 UvrD-like helicase C-terminal domain AMK58_RS01735 PF03167 Uracil DNA glycosylase superfamily AMK58_RS01745 PF12728 Helix-turn-helix domain AMK58_RS01750 PF13481 AAA domain AMK58_RS01755 PF11726 AMK58_RS01755 AMK58_RS01795 PF00012 Hsp70 protein AMK58_RS01800 PF13538 UvrD-like helicase C-terminal domain AMK58_RS01800 PF13604 AAA domain AMK58_RS01805 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS01805 PF13361 UvrD-like helicase C-terminal domain AMK58_RS01810 PF06114 Domain of unknown function (DUF955) AMK58_RS01815 PF00069 Protein kinase domain AMK58_RS01825 PF01935 Domain of unknown function DUF87 AMK58_RS01860 PF02384 N-6 DNA Methylase AMK58_RS01875 PF08878 AMK58_RS01875 AMK58_RS01880 PF00270 DEAD/DEAH box helicase AMK58_RS01880 PF00271 Helicase conserved C-terminal domain AMK58_RS01885 PF00589 Phage integrase family AMK58_RS01890 PF13441 AMK58_RS01890 AMK58_RS01900 PF00005 ABC transporter AMK58_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS01910 PF09084 NMT1/THI5 like AMK58_RS01920 PF00072 Response regulator receiver domain AMK58_RS01920 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS01920 PF00672 HAMP domain AMK58_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01920 PF02743 Cache domain AMK58_RS01920 PF08448 PAS fold AMK58_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01935 PF12224 AMK58_RS01935 AMK58_RS01940 PF07722 Peptidase C26 AMK58_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS01945 PF13426 PAS domain AMK58_RS01955 PF00614 Phospholipase D Active site motif AMK58_RS01955 PF13091 PLD-like domain AMK58_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS01965 PF00691 OmpA family AMK58_RS01965 PF14346 Domain of unknown function (DUF4398) AMK58_RS01970 PF14346 Domain of unknown function (DUF4398) AMK58_RS01980 PF07298 AMK58_RS01980 AMK58_RS01985 PF11154 AMK58_RS01985 AMK58_RS01995 PF13180 PDZ domain AMK58_RS01995 PF13365 Trypsin-like peptidase domain AMK58_RS02000 PF04344 Chemotaxis phosphatase, CheZ AMK58_RS02005 PF00805 Pentapeptide repeats (8 copies) AMK58_RS02010 PF07219 AMK58_RS02010 AMK58_RS02015 PF09731 AMK58_RS02015 AMK58_RS02020 PF02602 Uroporphyrinogen-III synthase HemD AMK58_RS02025 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMK58_RS02025 PF03900 Porphobilinogen deaminase, C-terminal domain AMK58_RS02030 PF13649 Methyltransferase domain AMK58_RS02035 PF00814 Glycoprotease family AMK58_RS02040 PF00583 Acetyltransferase (GNAT) family AMK58_RS02045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMK58_RS02045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMK58_RS02050 PF03795 YCII-related domain AMK58_RS02055 PF01878 EVE domain AMK58_RS02065 PF00501 AMP-binding enzyme AMK58_RS02065 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS02065 PF16177 AMK58_RS02065 AMK58_RS02075 PF00565 Staphylococcal nuclease homologue AMK58_RS02080 PF07896 Protein of unknown function (DUF1674) AMK58_RS02085 PF01435 Peptidase family M48 AMK58_RS02100 PF01029 NusB family AMK58_RS02100 PF01189 NOL1/NOP2/sun family AMK58_RS02105 PF07940 Heparinase II/III-like protein AMK58_RS02105 PF16889 AMK58_RS02105 AMK58_RS02110 PF01808 AICARFT/IMPCHase bienzyme AMK58_RS02110 PF02142 MGS-like domain AMK58_RS02120 PF11700 AMK58_RS02120 AMK58_RS02135 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMK58_RS02135 PF13432 Tetratricopeptide repeat AMK58_RS02140 PF05088 AMK58_RS02140 AMK58_RS02145 PF11849 AMK58_RS02145 AMK58_RS02145 PF13487 HD domain AMK58_RS02150 PF03401 Tripartite tricarboxylate transporter family receptor AMK58_RS02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02155 PF00672 HAMP domain AMK58_RS02160 PF03401 Tripartite tricarboxylate transporter family receptor AMK58_RS02165 PF03547 AMK58_RS02165 AMK58_RS02170 PF03737 Demethylmenaquinone methyltransferase AMK58_RS02180 PF04073 Aminoacyl-tRNA editing domain AMK58_RS02185 PF00085 Thioredoxin AMK58_RS02185 PF14559 Tetratricopeptide repeat AMK58_RS02185 PF14561 Tetratricopeptide repeat AMK58_RS02190 PF02190 ATP-dependent protease La (LON) domain AMK58_RS02195 PF03966 Trm112p-like protein AMK58_RS02200 PF06155 Protein of unknown function (DUF971) AMK58_RS02210 PF05899 Protein of unknown function (DUF861) AMK58_RS02215 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS02220 PF06568 AMK58_RS02220 AMK58_RS02225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMK58_RS02225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMK58_RS02230 PF02308 AMK58_RS02230 AMK58_RS02235 PF07690 Major Facilitator Superfamily AMK58_RS02240 PF01863 Protein of unknown function DUF45 AMK58_RS02245 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02245 PF08448 PAS fold AMK58_RS02255 PF13416 Bacterial extracellular solute-binding protein AMK58_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS02270 PF00005 ABC transporter AMK58_RS02270 PF08402 TOBE domain AMK58_RS02275 PF00043 Glutathione S-transferase, C-terminal domain AMK58_RS02275 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS02280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS02285 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMK58_RS02295 PF00270 DEAD/DEAH box helicase AMK58_RS02295 PF00271 Helicase conserved C-terminal domain AMK58_RS02300 PF01475 Ferric uptake regulator family AMK58_RS02310 PF07044 Protein of unknown function (DUF1329) AMK58_RS02315 PF00072 Response regulator receiver domain AMK58_RS02315 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02315 PF00989 PAS fold AMK58_RS02315 PF01627 Hpt domain AMK58_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02320 PF00672 HAMP domain AMK58_RS02320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02320 PF08447 PAS fold AMK58_RS02320 PF12860 AMK58_RS02320 AMK58_RS02325 PF01740 STAS domain AMK58_RS02330 PF13581 Histidine kinase-like ATPase domain AMK58_RS02335 PF00072 Response regulator receiver domain AMK58_RS02335 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS02340 PF09335 AMK58_RS02340 AMK58_RS02350 PF13470 AMK58_RS02350 AMK58_RS02355 PF00072 Response regulator receiver domain AMK58_RS02355 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS02360 PF00072 Response regulator receiver domain AMK58_RS02360 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS02365 PF13581 Histidine kinase-like ATPase domain AMK58_RS02370 PF13466 STAS domain AMK58_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02380 PF00072 Response regulator receiver domain AMK58_RS02380 PF01339 CheB methylesterase AMK58_RS02385 PF03975 CheD chemotactic sensory transduction AMK58_RS02390 PF01739 CheR methyltransferase, SAM binding domain AMK58_RS02390 PF03705 CheR methyltransferase, all-alpha domain AMK58_RS02395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02395 PF00672 HAMP domain AMK58_RS02395 PF08448 PAS fold AMK58_RS02400 PF01584 CheW-like domain AMK58_RS02405 PF01584 CheW-like domain AMK58_RS02405 PF01627 Hpt domain AMK58_RS02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02405 PF02895 Signal transducing histidine kinase, homodimeric domain AMK58_RS02410 PF00072 Response regulator receiver domain AMK58_RS02415 PF13466 STAS domain AMK58_RS02420 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02430 PF00929 Exonuclease AMK58_RS02435 PF00072 Response regulator receiver domain AMK58_RS02440 PF05036 Sporulation related domain AMK58_RS02445 PF01522 Polysaccharide deacetylase AMK58_RS02450 PF04279 AMK58_RS02450 AMK58_RS02455 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMK58_RS02460 PF01048 Phosphorylase superfamily AMK58_RS02460 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AMK58_RS02465 PF00448 SRP54-type protein, GTPase domain AMK58_RS02465 PF02881 SRP54-type protein, helical bundle domain AMK58_RS02470 PF00919 Uncharacterized protein family UPF0004 AMK58_RS02470 PF04055 Radical SAM superfamily AMK58_RS02475 PF01678 Diaminopimelate epimerase AMK58_RS02485 PF04138 AMK58_RS02485 AMK58_RS02490 PF00535 Glycosyl transferase family 2 AMK58_RS02500 PF00694 Aconitase C-terminal domain AMK58_RS02505 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS02510 PF10685 AMK58_RS02510 AMK58_RS02520 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK58_RS02525 PF08543 Phosphomethylpyrimidine kinase AMK58_RS02530 PF03641 Possible lysine decarboxylase AMK58_RS02540 PF03969 AFG1-like ATPase AMK58_RS02545 PF00990 GGDEF domain AMK58_RS02545 PF11563 Protoglobin AMK58_RS02550 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS02550 PF00989 PAS fold AMK58_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS02550 PF02743 Cache domain AMK58_RS02555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMK58_RS02555 PF00364 Biotin-requiring enzyme AMK58_RS02555 PF02817 e3 binding domain AMK58_RS02560 PF00676 Dehydrogenase E1 component AMK58_RS02560 PF02779 Transketolase, pyrimidine binding domain AMK58_RS02560 PF16078 AMK58_RS02560 AMK58_RS02560 PF16870 AMK58_RS02560 AMK58_RS02565 PF00549 CoA-ligase AMK58_RS02565 PF02629 CoA binding domain AMK58_RS02570 PF00549 CoA-ligase AMK58_RS02570 PF08442 ATP-grasp domain AMK58_RS02575 PF00056 lactate/malate dehydrogenase, NAD binding domain AMK58_RS02575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMK58_RS02585 PF10098 AMK58_RS02585 AMK58_RS02590 PF01921 tRNA synthetases class I (K) AMK58_RS02595 PF00893 Small Multidrug Resistance protein AMK58_RS02605 PF00912 Transglycosylase AMK58_RS02610 PF13307 Helicase C-terminal domain AMK58_RS02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02615 PF00672 HAMP domain AMK58_RS02615 PF12729 AMK58_RS02615 AMK58_RS02620 PF12844 Helix-turn-helix domain AMK58_RS02625 PF04204 Homoserine O-succinyltransferase AMK58_RS02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS02635 PF00672 HAMP domain AMK58_RS02635 PF12729 AMK58_RS02635 AMK58_RS02640 PF03547 AMK58_RS02640 AMK58_RS02645 PF05099 Tellurite resistance protein TerB AMK58_RS02650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS02650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS02655 PF13673 Acetyltransferase (GNAT) domain AMK58_RS02660 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS02660 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS02670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMK58_RS02675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMK58_RS02680 PF00890 FAD binding domain AMK58_RS02680 PF02910 Fumarate reductase flavoprotein C-term AMK58_RS02685 PF13085 2Fe-2S iron-sulfur cluster binding domain AMK58_RS02685 PF13183 4Fe-4S dicluster domain AMK58_RS02695 PF01063 Aminotransferase class IV AMK58_RS02710 PF00717 Peptidase S24-like AMK58_RS02730 PF12236 Bacteriophage head to tail connecting protein AMK58_RS02735 PF13560 Helix-turn-helix domain AMK58_RS02745 PF13808 AMK58_RS02745 AMK58_RS02755 PF01223 DNA/RNA non-specific endonuclease AMK58_RS02765 PF01037 AsnC family AMK58_RS02765 PF13412 Winged helix-turn-helix DNA-binding AMK58_RS02770 PF07883 Cupin domain AMK58_RS02770 PF14518 Iron-containing redox enzyme AMK58_RS02775 PF00355 Rieske [2Fe-2S] domain AMK58_RS02780 PF13520 Amino acid permease AMK58_RS02785 PF13467 Ribbon-helix-helix domain AMK58_RS02795 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AMK58_RS02800 PF00775 Dioxygenase AMK58_RS02810 PF03070 TENA/THI-4/PQQC family AMK58_RS02815 PF13811 AMK58_RS02815 AMK58_RS02820 PF00239 Resolvase, N terminal domain AMK58_RS02820 PF02796 Helix-turn-helix domain of resolvase AMK58_RS02830 PF00899 ThiF family AMK58_RS02835 PF13518 Helix-turn-helix domain AMK58_RS02835 PF13592 AMK58_RS02835 AMK58_RS02840 PF13358 DDE superfamily endonuclease AMK58_RS02845 PF01734 Patatin-like phospholipase AMK58_RS02850 PF13586 AMK58_RS02850 AMK58_RS02855 PF00872 AMK58_RS02855 AMK58_RS02860 PF01610 AMK58_RS02860 AMK58_RS02865 PF13175 AAA ATPase domain AMK58_RS02870 PF13245 Part of AAA domain AMK58_RS02875 PF04248 Domain of unknown function (DUF427) AMK58_RS02880 PF00929 Exonuclease AMK58_RS02885 PF12833 Helix-turn-helix domain AMK58_RS02885 PF12852 Cupin AMK58_RS02890 PF07690 Major Facilitator Superfamily AMK58_RS02920 PF13701 AMK58_RS02920 AMK58_RS02925 PF13358 DDE superfamily endonuclease AMK58_RS02925 PF13565 AMK58_RS02925 AMK58_RS02930 PF05598 AMK58_RS02930 AMK58_RS02935 PF12236 Bacteriophage head to tail connecting protein AMK58_RS02950 PF00563 EAL domain AMK58_RS02950 PF00672 HAMP domain AMK58_RS02950 PF00990 GGDEF domain AMK58_RS02950 PF08448 PAS fold AMK58_RS02955 PF05239 PRC-barrel domain AMK58_RS02985 PF12708 Pectate lyase superfamily protein AMK58_RS03000 PF07486 Cell Wall Hydrolase AMK58_RS03010 PF06108 Protein of unknown function (DUF952) AMK58_RS03015 PF01180 Dihydroorotate dehydrogenase AMK58_RS03020 PF00563 EAL domain AMK58_RS03025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK58_RS03025 PF02824 TGS domain AMK58_RS03025 PF03129 Anticodon binding domain AMK58_RS03025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS03030 PF00707 Translation initiation factor IF-3, C-terminal domain AMK58_RS03030 PF05198 Translation initiation factor IF-3, N-terminal domain AMK58_RS03035 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS03035 PF00912 Transglycosylase AMK58_RS03040 PF06347 Bacterial SH3 domain AMK58_RS03050 PF13467 Ribbon-helix-helix domain AMK58_RS03055 PF13242 HAD-hyrolase-like AMK58_RS03055 PF13344 Haloacid dehalogenase-like hydrolase AMK58_RS03060 PF00534 Glycosyl transferases group 1 AMK58_RS03060 PF13439 Glycosyltransferase Family 4 AMK58_RS03065 PF12146 Putative lysophospholipase AMK58_RS03080 PF03929 AMK58_RS03080 AMK58_RS03085 PF00593 TonB dependent receptor AMK58_RS03085 PF07715 TonB-dependent Receptor Plug Domain AMK58_RS03090 PF04773 FecR protein AMK58_RS03090 PF16220 AMK58_RS03090 AMK58_RS03090 PF16344 AMK58_RS03090 AMK58_RS03095 PF04542 Sigma-70 region 2 AMK58_RS03095 PF08281 Sigma-70, region 4 AMK58_RS03100 PF00884 Sulfatase AMK58_RS03105 PF13584 AMK58_RS03105 AMK58_RS03115 PF13519 von Willebrand factor type A domain AMK58_RS03120 PF00092 von Willebrand factor type A domain AMK58_RS03125 PF14316 AMK58_RS03125 AMK58_RS03130 PF01882 AMK58_RS03130 AMK58_RS03135 PF07726 ATPase family associated with various cellular activities (AAA) AMK58_RS03140 PF12710 haloacid dehalogenase-like hydrolase AMK58_RS03145 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS03155 PF13432 Tetratricopeptide repeat AMK58_RS03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS03160 PF03466 LysR substrate binding domain AMK58_RS03165 PF02515 CoA-transferase family III AMK58_RS03170 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS03175 PF13577 SnoaL-like domain AMK58_RS03180 PF01425 Amidase AMK58_RS03185 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS03190 PF13458 Periplasmic binding protein AMK58_RS03195 PF02653 AMK58_RS03195 AMK58_RS03200 PF02653 AMK58_RS03200 AMK58_RS03205 PF00005 ABC transporter AMK58_RS03205 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS03210 PF00005 ABC transporter AMK58_RS03225 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS03235 PF00005 ABC transporter AMK58_RS03240 PF00092 von Willebrand factor type A domain AMK58_RS03245 PF08238 Sel1 repeat AMK58_RS03250 PF10139 AMK58_RS03250 AMK58_RS03255 PF07520 AMK58_RS03255 AMK58_RS03265 PF13519 von Willebrand factor type A domain AMK58_RS03270 PF13365 Trypsin-like peptidase domain AMK58_RS03275 PF12850 Calcineurin-like phosphoesterase superfamily domain AMK58_RS03280 PF13773 Domain of unknown function (DUF4170) AMK58_RS03285 PF01292 Prokaryotic cytochrome b561 AMK58_RS03290 PF01322 Cytochrome C' AMK58_RS03295 PF00155 Aminotransferase class I and II AMK58_RS03300 PF06965 Na+/H+ antiporter 1 AMK58_RS03305 PF01566 AMK58_RS03305 AMK58_RS03310 PF00009 Elongation factor Tu GTP binding domain AMK58_RS03310 PF00679 Elongation factor G C-terminus AMK58_RS03310 PF03764 Elongation factor G, domain IV AMK58_RS03310 PF14492 Elongation Factor G, domain II AMK58_RS03315 PF02558 Ketopantoate reductase PanE/ApbA AMK58_RS03315 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMK58_RS03320 PF17200 AMK58_RS03320 AMK58_RS03325 PF00210 Ferritin-like domain AMK58_RS03330 PF07681 AMK58_RS03330 AMK58_RS03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS03340 PF13640 2OG-Fe(II) oxygenase superfamily AMK58_RS03350 PF06258 AMK58_RS03350 AMK58_RS03355 PF01037 AsnC family AMK58_RS03355 PF13412 Winged helix-turn-helix DNA-binding AMK58_RS03360 PF01738 Dienelactone hydrolase family AMK58_RS03365 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS03365 PF03449 Transcription elongation factor, N-terminal AMK58_RS03370 PF02142 MGS-like domain AMK58_RS03370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK58_RS03370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMK58_RS03385 PF02308 AMK58_RS03385 AMK58_RS03390 PF05163 DinB family AMK58_RS03395 PF01580 FtsK/SpoIIIE family AMK58_RS03395 PF09397 Ftsk gamma domain AMK58_RS03400 PF08448 PAS fold AMK58_RS03415 PF01625 Peptide methionine sulfoxide reductase AMK58_RS03425 PF00588 SpoU rRNA Methylase family AMK58_RS03425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS03430 PF00106 short chain dehydrogenase AMK58_RS03435 PF09335 AMK58_RS03435 AMK58_RS03445 PF00034 Cytochrome c AMK58_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS03455 PF00171 Aldehyde dehydrogenase family AMK58_RS03460 PF05610 AMK58_RS03460 AMK58_RS03465 PF08495 AMK58_RS03465 AMK58_RS03465 PF10442 AMK58_RS03465 AMK58_RS03470 PF00072 Response regulator receiver domain AMK58_RS03470 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03470 PF08448 PAS fold AMK58_RS03470 PF12860 AMK58_RS03470 AMK58_RS03475 PF01061 AMK58_RS03475 AMK58_RS03480 PF00005 ABC transporter AMK58_RS03485 PF10282 Lactonase, 7-bladed beta-propeller AMK58_RS03490 PF13458 Periplasmic binding protein AMK58_RS03495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS03500 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS03505 PF08770 Sulphur oxidation protein SoxZ AMK58_RS03505 PF13501 Sulfur oxidation protein SoxY AMK58_RS03510 PF00753 Metallo-beta-lactamase superfamily AMK58_RS03515 PF01011 PQQ enzyme repeat AMK58_RS03515 PF13360 PQQ-like domain AMK58_RS03520 PF00072 Response regulator receiver domain AMK58_RS03520 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03530 PF00005 ABC transporter AMK58_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS03540 PF09084 NMT1/THI5 like AMK58_RS03550 PF00034 Cytochrome c AMK58_RS03555 PF07883 Cupin domain AMK58_RS03565 PF02600 Disulfide bond formation protein DsbB AMK58_RS03570 PF03232 AMK58_RS03570 AMK58_RS03575 PF14279 AMK58_RS03575 AMK58_RS03580 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS03585 PF00072 Response regulator receiver domain AMK58_RS03585 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03585 PF08448 PAS fold AMK58_RS03590 PF15916 AMK58_RS03590 AMK58_RS03595 PF00072 Response regulator receiver domain AMK58_RS03600 PF06798 AMK58_RS03600 AMK58_RS03600 PF08298 PrkA AAA domain AMK58_RS03605 PF04285 AMK58_RS03605 AMK58_RS03610 PF04293 AMK58_RS03610 AMK58_RS03615 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS03625 PF00271 Helicase conserved C-terminal domain AMK58_RS03625 PF04408 Helicase associated domain (HA2) AMK58_RS03625 PF08482 AMK58_RS03625 AMK58_RS03630 PF00005 ABC transporter AMK58_RS03630 PF09821 AMK58_RS03630 AMK58_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS03640 PF00210 Ferritin-like domain AMK58_RS03650 PF00072 Response regulator receiver domain AMK58_RS03650 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS03655 PF13466 STAS domain AMK58_RS03665 PF00570 HRDC domain AMK58_RS03670 PF01957 NfeD-like C-terminal, partner-binding AMK58_RS03675 PF01145 SPFH domain / Band 7 family AMK58_RS03680 PF01594 AMK58_RS03680 AMK58_RS03685 PF05981 AMK58_RS03685 AMK58_RS03690 PF05145 AMK58_RS03690 AMK58_RS03695 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMK58_RS03700 PF05013 N-formylglutamate amidohydrolase AMK58_RS03705 PF01513 ATP-NAD kinase AMK58_RS03710 PF04055 Radical SAM superfamily AMK58_RS03710 PF06463 Molybdenum Cofactor Synthesis C AMK58_RS03710 PF13353 4Fe-4S single cluster domain AMK58_RS03715 PF12838 4Fe-4S dicluster domain AMK58_RS03720 PF13420 Acetyltransferase (GNAT) domain AMK58_RS03725 PF00072 Response regulator receiver domain AMK58_RS03725 PF01627 Hpt domain AMK58_RS03730 PF06319 Protein of unknown function (DUF1052) AMK58_RS03735 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03740 PF00072 Response regulator receiver domain AMK58_RS03740 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03745 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS03745 PF03924 CHASE domain AMK58_RS03745 PF08448 PAS fold AMK58_RS03750 PF01515 Phosphate acetyl/butaryl transferase AMK58_RS03750 PF01575 MaoC like domain AMK58_RS03755 PF00871 Acetokinase family AMK58_RS03765 PF00571 CBS domain AMK58_RS03775 PF11294 AMK58_RS03775 AMK58_RS03780 PF03733 AMK58_RS03780 AMK58_RS03795 PF00072 Response regulator receiver domain AMK58_RS03795 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03800 PF00072 Response regulator receiver domain AMK58_RS03800 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS03805 PF00580 UvrD/REP helicase N-terminal domain AMK58_RS03805 PF13361 UvrD-like helicase C-terminal domain AMK58_RS03820 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMK58_RS03825 PF05099 Tellurite resistance protein TerB AMK58_RS03830 PF00557 Metallopeptidase family M24 AMK58_RS03830 PF01321 Creatinase/Prolidase N-terminal domain AMK58_RS03830 PF16188 AMK58_RS03830 AMK58_RS03830 PF16189 AMK58_RS03830 AMK58_RS03835 PF00072 Response regulator receiver domain AMK58_RS03840 PF04344 Chemotaxis phosphatase, CheZ AMK58_RS03845 PF04344 Chemotaxis phosphatase, CheZ AMK58_RS03850 PF13525 Outer membrane lipoprotein AMK58_RS03855 PF02463 RecF/RecN/SMC N terminal domain AMK58_RS03860 PF16841 AMK58_RS03860 AMK58_RS03875 PF00533 BRCA1 C Terminus (BRCT) domain AMK58_RS03875 PF01653 NAD-dependent DNA ligase adenylation domain AMK58_RS03875 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMK58_RS03875 PF03120 NAD-dependent DNA ligase OB-fold domain AMK58_RS03875 PF12826 Helix-hairpin-helix motif AMK58_RS03880 PF01814 Hemerythrin HHE cation binding domain AMK58_RS03885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMK58_RS03890 PF00091 Tubulin/FtsZ family, GTPase domain AMK58_RS03890 PF12327 FtsZ family, C-terminal domain AMK58_RS03895 PF02491 SHS2 domain inserted in FTSA AMK58_RS03895 PF14450 Cell division protein FtsA AMK58_RS03900 PF03799 Cell division protein FtsQ AMK58_RS03900 PF08478 POTRA domain, FtsQ-type AMK58_RS03905 PF01820 D-ala D-ala ligase N-terminus AMK58_RS03905 PF07478 D-ala D-ala ligase C-terminus AMK58_RS03910 PF01565 FAD binding domain AMK58_RS03910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMK58_RS03915 PF01225 Mur ligase family, catalytic domain AMK58_RS03915 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03915 PF08245 Mur ligase middle domain AMK58_RS03925 PF03033 Glycosyltransferase family 28 N-terminal domain AMK58_RS03925 PF04101 Glycosyltransferase family 28 C-terminal domain AMK58_RS03930 PF01098 AMK58_RS03930 AMK58_RS03935 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03935 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMK58_RS03935 PF08245 Mur ligase middle domain AMK58_RS03940 PF00953 Glycosyl transferase family 4 AMK58_RS03940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMK58_RS03945 PF01225 Mur ligase family, catalytic domain AMK58_RS03945 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03945 PF08245 Mur ligase middle domain AMK58_RS03950 PF01225 Mur ligase family, catalytic domain AMK58_RS03950 PF02875 Mur ligase family, glutamate ligase domain AMK58_RS03950 PF08245 Mur ligase middle domain AMK58_RS03955 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS03955 PF03717 Penicillin-binding Protein dimerisation domain AMK58_RS03965 PF01795 MraW methylase family AMK58_RS03970 PF02381 MraZ protein AMK58_RS03980 PF01510 N-acetylmuramoyl-L-alanine amidase AMK58_RS03985 PF00892 EamA-like transporter family AMK58_RS03990 PF00005 ABC transporter AMK58_RS03990 PF16326 AMK58_RS03990 AMK58_RS03995 PF00226 DnaJ domain AMK58_RS03995 PF05099 Tellurite resistance protein TerB AMK58_RS04000 PF00583 Acetyltransferase (GNAT) family AMK58_RS04005 PF01968 Hydantoinase/oxoprolinase AMK58_RS04005 PF02538 AMK58_RS04005 AMK58_RS04005 PF05378 AMK58_RS04005 AMK58_RS04010 PF01565 FAD binding domain AMK58_RS04010 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS04015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS04030 PF00072 Response regulator receiver domain AMK58_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04035 PF02627 Carboxymuconolactone decarboxylase family AMK58_RS04055 PF00348 Polyprenyl synthetase AMK58_RS04060 PF09413 Domain of unknown function (DUF2007) AMK58_RS04065 PF05175 Methyltransferase small domain AMK58_RS04070 PF01343 Peptidase family S49 AMK58_RS04075 PF15919 AMK58_RS04075 AMK58_RS04085 PF02091 Glycyl-tRNA synthetase alpha subunit AMK58_RS04090 PF02092 AMK58_RS04090 AMK58_RS04090 PF05746 DALR anticodon binding domain AMK58_RS04095 PF00682 HMGL-like AMK58_RS04095 PF08502 LeuA allosteric (dimerisation) domain AMK58_RS04100 PF04172 AMK58_RS04100 AMK58_RS04105 PF03788 AMK58_RS04105 AMK58_RS04110 PF01738 Dienelactone hydrolase family AMK58_RS04115 PF12616 AMK58_RS04115 AMK58_RS04120 PF03364 Polyketide cyclase / dehydrase and lipid transport AMK58_RS04125 PF00107 Zinc-binding dehydrogenase AMK58_RS04125 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS04125 PF13823 Alcohol dehydrogenase GroES-associated AMK58_RS04135 PF00128 Alpha amylase, catalytic domain AMK58_RS04135 PF11941 Domain of unknown function (DUF3459) AMK58_RS04140 PF06202 Amylo-alpha-1,6-glucosidase AMK58_RS04140 PF12439 AMK58_RS04140 AMK58_RS04145 PF00989 PAS fold AMK58_RS04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04160 PF01522 Polysaccharide deacetylase AMK58_RS04165 PF11154 AMK58_RS04165 AMK58_RS04170 PF00313 'Cold-shock' DNA-binding domain AMK58_RS04170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMK58_RS04175 PF01471 Putative peptidoglycan binding domain AMK58_RS04175 PF03734 L,D-transpeptidase catalytic domain AMK58_RS04180 PF05951 AMK58_RS04180 AMK58_RS04190 PF01381 Helix-turn-helix AMK58_RS04195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04195 PF00672 HAMP domain AMK58_RS04210 PF00350 Dynamin family AMK58_RS04215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS04220 PF01220 Dehydroquinase class II AMK58_RS04225 PF00364 Biotin-requiring enzyme AMK58_RS04230 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMK58_RS04230 PF02785 Biotin carboxylase C-terminal domain AMK58_RS04230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK58_RS04235 PF00445 Ribonuclease T2 family AMK58_RS04240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMK58_RS04245 PF09923 AMK58_RS04245 AMK58_RS04255 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS04255 PF02861 Clp amino terminal domain AMK58_RS04255 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS04255 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS04260 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMK58_RS04265 PF09361 AMK58_RS04265 AMK58_RS04270 PF09361 AMK58_RS04270 AMK58_RS04275 PF00227 Proteasome subunit AMK58_RS04285 PF00768 D-alanyl-D-alanine carboxypeptidase AMK58_RS04285 PF05036 Sporulation related domain AMK58_RS04290 PF12849 PBP superfamily domain AMK58_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS04300 PF02634 FdhD/NarQ family AMK58_RS04305 PF12804 MobA-like NTP transferase domain AMK58_RS04310 PF11749 AMK58_RS04310 AMK58_RS04315 PF11748 AMK58_RS04315 AMK58_RS04320 PF02613 Nitrate reductase delta subunit AMK58_RS04330 PF00384 Molybdopterin oxidoreductase AMK58_RS04330 PF01568 Molydopterin dinucleotide binding domain AMK58_RS04330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS04335 PF13247 4Fe-4S dicluster domain AMK58_RS04345 PF01292 Prokaryotic cytochrome b561 AMK58_RS04355 PF00400 WD domain, G-beta repeat AMK58_RS04360 PF00596 Class II Aldolase and Adducin N-terminal domain AMK58_RS04365 PF00672 HAMP domain AMK58_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMK58_RS04375 PF00430 ATP synthase B/B' CF(0) AMK58_RS04380 PF00430 ATP synthase B/B' CF(0) AMK58_RS04385 PF00137 ATP synthase subunit C AMK58_RS04390 PF00119 ATP synthase A chain AMK58_RS04395 PF09527 AMK58_RS04395 AMK58_RS04400 PF02630 SCO1/SenC AMK58_RS04410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04410 PF00672 HAMP domain AMK58_RS04410 PF01814 Hemerythrin HHE cation binding domain AMK58_RS04410 PF17200 AMK58_RS04410 AMK58_RS04415 PF02562 PhoH-like protein AMK58_RS04420 PF03775 Septum formation inhibitor MinC, C-terminal domain AMK58_RS04420 PF05209 Septum formation inhibitor MinC, N-terminal domain AMK58_RS04425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS04430 PF03776 Septum formation topological specificity factor MinE AMK58_RS04435 PF07593 AMK58_RS04435 AMK58_RS04435 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella AMK58_RS04440 PF08447 PAS fold AMK58_RS04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMK58_RS04455 PF13378 Enolase C-terminal domain-like AMK58_RS04460 PF07883 Cupin domain AMK58_RS04465 PF00266 Aminotransferase class-V AMK58_RS04470 PF13524 Glycosyl transferases group 1 AMK58_RS04475 PF01329 Pterin 4 alpha carbinolamine dehydratase AMK58_RS04480 PF03167 Uracil DNA glycosylase superfamily AMK58_RS04485 PF02685 Glucokinase AMK58_RS04490 PF00982 Glycosyltransferase family 20 AMK58_RS04495 PF05013 N-formylglutamate amidohydrolase AMK58_RS04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04505 PF00672 HAMP domain AMK58_RS04505 PF02743 Cache domain AMK58_RS04510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04510 PF00672 HAMP domain AMK58_RS04510 PF07238 PilZ domain AMK58_RS04515 PF01274 Malate synthase AMK58_RS04520 PF13538 UvrD-like helicase C-terminal domain AMK58_RS04520 PF13604 AAA domain AMK58_RS04520 PF14490 Helix-hairpin-helix containing domain AMK58_RS04520 PF14520 Helix-hairpin-helix domain AMK58_RS04525 PF00313 'Cold-shock' DNA-binding domain AMK58_RS04530 PF00027 Cyclic nucleotide-binding domain AMK58_RS04530 PF13545 Crp-like helix-turn-helix domain AMK58_RS04535 PF00072 Response regulator receiver domain AMK58_RS04535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04535 PF01627 Hpt domain AMK58_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS04535 PF11849 AMK58_RS04535 AMK58_RS04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04540 PF00672 HAMP domain AMK58_RS04540 PF02203 Tar ligand binding domain homologue AMK58_RS04540 PF07238 PilZ domain AMK58_RS04550 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AMK58_RS04555 PF01494 FAD binding domain AMK58_RS04560 PF00766 Electron transfer flavoprotein FAD-binding domain AMK58_RS04560 PF01012 Electron transfer flavoprotein domain AMK58_RS04565 PF01012 Electron transfer flavoprotein domain AMK58_RS04570 PF03206 AMK58_RS04570 AMK58_RS04575 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS04580 PF00682 HMGL-like AMK58_RS04585 PF00266 Aminotransferase class-V AMK58_RS04590 PF01106 NifU-like domain AMK58_RS04590 PF01592 NifU-like N terminal domain AMK58_RS04590 PF04324 BFD-like [2Fe-2S] binding domain AMK58_RS04595 PF01521 Iron-sulphur cluster biosynthesis AMK58_RS04605 PF04891 AMK58_RS04605 AMK58_RS04610 PF14697 4Fe-4S dicluster domain AMK58_RS04615 PF05082 Rop-like AMK58_RS04620 PF03270 Protein of unknown function, DUF269 AMK58_RS04625 PF02579 Dinitrogenase iron-molybdenum cofactor AMK58_RS04630 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04635 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS04640 PF08447 PAS fold AMK58_RS04640 PF13426 PAS domain AMK58_RS04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS04650 PF02082 Transcriptional regulator AMK58_RS04655 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04655 PF11844 Domain of unknown function (DUF3364) AMK58_RS04660 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS04665 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AMK58_RS04675 PF07357 AMK58_RS04675 AMK58_RS04680 PF03747 ADP-ribosylglycohydrolase AMK58_RS04685 PF03960 ArsC family AMK58_RS04690 PF13230 Glutamine amidotransferases class-II AMK58_RS04695 PF02525 Flavodoxin-like fold AMK58_RS04700 PF13289 AMK58_RS04700 AMK58_RS04705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK58_RS04715 PF06988 NifT/FixU protein AMK58_RS04720 PF00266 Aminotransferase class-V AMK58_RS04725 PF04319 AMK58_RS04725 AMK58_RS04730 PF04319 AMK58_RS04730 AMK58_RS04735 PF01816 Leucine rich repeat variant AMK58_RS04735 PF05484 LRV protein FeS4 cluster AMK58_RS04745 PF00037 4Fe-4S binding domain AMK58_RS04750 PF02579 Dinitrogenase iron-molybdenum cofactor AMK58_RS04750 PF04055 Radical SAM superfamily AMK58_RS04755 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS04755 PF00498 FHA domain AMK58_RS04765 PF00158 Sigma-54 interaction domain AMK58_RS04765 PF02954 Bacterial regulatory protein, Fis family AMK58_RS04765 PF13185 GAF domain AMK58_RS04770 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS04770 PF16859 AMK58_RS04770 AMK58_RS04775 PF13437 HlyD family secretion protein AMK58_RS04775 PF13533 Biotin-lipoyl like AMK58_RS04780 PF00005 ABC transporter AMK58_RS04790 PF12698 ABC-2 family transporter protein AMK58_RS04795 PF03411 Penicillin-insensitive murein endopeptidase AMK58_RS04800 PF13489 Methyltransferase domain AMK58_RS04805 PF00444 Ribosomal protein L36 AMK58_RS04810 PF01565 FAD binding domain AMK58_RS04810 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04815 PF01565 FAD binding domain AMK58_RS04820 PF02754 AMK58_RS04820 AMK58_RS04820 PF12838 4Fe-4S dicluster domain AMK58_RS04840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK58_RS04840 PF02770 Acyl-CoA dehydrogenase, middle domain AMK58_RS04840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK58_RS04840 PF12418 AMK58_RS04840 AMK58_RS04840 PF12806 AMK58_RS04840 AMK58_RS04855 PF01565 FAD binding domain AMK58_RS04855 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS04860 PF01300 Telomere recombination AMK58_RS04860 PF03481 Putative GTP-binding controlling metal-binding AMK58_RS04865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS04870 PF04577 AMK58_RS04870 AMK58_RS04875 PF00578 AhpC/TSA family AMK58_RS04880 PF03710 Glutamate-ammonia ligase adenylyltransferase AMK58_RS04880 PF08335 GlnD PII-uridylyltransferase AMK58_RS04885 PF13116 AMK58_RS04885 AMK58_RS04885 PF13502 AMK58_RS04885 AMK58_RS04890 PF00579 tRNA synthetases class I (W and Y) AMK58_RS04895 PF03702 Uncharacterised protein family (UPF0075) AMK58_RS04900 PF00326 Prolyl oligopeptidase family AMK58_RS04900 PF12146 Putative lysophospholipase AMK58_RS04905 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS04910 PF02082 Transcriptional regulator AMK58_RS04915 PF00266 Aminotransferase class-V AMK58_RS04925 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK58_RS04930 PF03054 tRNA methyl transferase AMK58_RS04940 PF13374 Tetratricopeptide repeat AMK58_RS04940 PF13414 TPR repeat AMK58_RS04940 PF13432 Tetratricopeptide repeat AMK58_RS04945 PF13437 HlyD family secretion protein AMK58_RS04945 PF13533 Biotin-lipoyl like AMK58_RS04950 PF00005 ABC transporter AMK58_RS04950 PF00664 ABC transporter transmembrane region AMK58_RS04955 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMK58_RS04960 PF11512 Agrobacterium tumefaciens protein Atu4866 AMK58_RS04965 PF02627 Carboxymuconolactone decarboxylase family AMK58_RS04970 PF00106 short chain dehydrogenase AMK58_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS04975 PF03466 LysR substrate binding domain AMK58_RS04980 PF13847 Methyltransferase domain AMK58_RS04985 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMK58_RS04985 PF13753 Putative flagellar system-associated repeat AMK58_RS04985 PF14252 AMK58_RS04985 AMK58_RS04990 PF00072 Response regulator receiver domain AMK58_RS04990 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS05000 PF00072 Response regulator receiver domain AMK58_RS05015 PF04891 AMK58_RS05015 AMK58_RS05020 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) AMK58_RS05025 PF01894 Uncharacterised protein family UPF0047 AMK58_RS05030 PF06803 AMK58_RS05030 AMK58_RS05035 PF01471 Putative peptidoglycan binding domain AMK58_RS05035 PF13406 Transglycosylase SLT domain AMK58_RS05045 PF01904 Protein of unknown function DUF72 AMK58_RS05050 PF10101 AMK58_RS05050 AMK58_RS05055 PF00465 Iron-containing alcohol dehydrogenase AMK58_RS05060 PF07484 Phage Tail Collar Domain AMK58_RS05065 PF07484 Phage Tail Collar Domain AMK58_RS05070 PF13524 Glycosyl transferases group 1 AMK58_RS05075 PF13692 Glycosyl transferases group 1 AMK58_RS05080 PF00583 Acetyltransferase (GNAT) family AMK58_RS05085 PF00583 Acetyltransferase (GNAT) family AMK58_RS05100 PF00206 Lyase AMK58_RS05100 PF10415 Fumarase C C-terminus AMK58_RS05105 PF13467 Ribbon-helix-helix domain AMK58_RS05110 PF04654 AMK58_RS05110 AMK58_RS05115 PF00563 EAL domain AMK58_RS05120 PF02222 ATP-grasp domain AMK58_RS05125 PF00731 AIR carboxylase AMK58_RS05130 PF04325 Protein of unknown function (DUF465) AMK58_RS05135 PF00365 Phosphofructokinase AMK58_RS05140 PF09523 AMK58_RS05140 AMK58_RS05145 PF13302 Acetyltransferase (GNAT) domain AMK58_RS05155 PF13432 Tetratricopeptide repeat AMK58_RS05160 PF00460 Flagella basal body rod protein AMK58_RS05160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS05165 PF00484 Carbonic anhydrase AMK58_RS05170 PF02441 Flavoprotein AMK58_RS05175 PF06242 AMK58_RS05175 AMK58_RS05180 PF00107 Zinc-binding dehydrogenase AMK58_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS05185 PF06698 AMK58_RS05185 AMK58_RS05190 PF09955 AMK58_RS05190 AMK58_RS05195 PF13770 AMK58_RS05195 AMK58_RS05200 PF05170 AMK58_RS05200 AMK58_RS05200 PF13502 AMK58_RS05200 AMK58_RS05205 PF04380 AMK58_RS05205 AMK58_RS05210 PF10722 Putative bacterial sensory transduction regulator AMK58_RS05215 PF03807 NADP oxidoreductase coenzyme F420-dependent AMK58_RS05215 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMK58_RS05220 PF04073 Aminoacyl-tRNA editing domain AMK58_RS05225 PF00501 AMP-binding enzyme AMK58_RS05225 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS05230 PF13527 Acetyltransferase (GNAT) domain AMK58_RS05230 PF13530 Sterol carrier protein domain AMK58_RS05235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05235 PF00672 HAMP domain AMK58_RS05235 PF16591 AMK58_RS05235 AMK58_RS05240 PF04932 AMK58_RS05240 AMK58_RS05245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMK58_RS05250 PF03706 AMK58_RS05250 AMK58_RS05255 PF08331 AMK58_RS05255 AMK58_RS05255 PF13484 AMK58_RS05255 AMK58_RS05260 PF14489 QueF-like protein AMK58_RS05265 PF01702 Queuine tRNA-ribosyltransferase AMK58_RS05270 PF02547 Queuosine biosynthesis protein AMK58_RS05275 PF03109 AMK58_RS05275 AMK58_RS05280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05280 PF00672 HAMP domain AMK58_RS05280 PF12729 AMK58_RS05280 AMK58_RS05285 PF01565 FAD binding domain AMK58_RS05285 PF08031 Berberine and berberine like AMK58_RS05290 PF01814 Hemerythrin HHE cation binding domain AMK58_RS05295 PF01432 Peptidase family M3 AMK58_RS05295 PF08439 Oligopeptidase F AMK58_RS05305 PF10503 Esterase PHB depolymerase AMK58_RS05310 PF00501 AMP-binding enzyme AMK58_RS05310 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS05310 PF16177 AMK58_RS05310 AMK58_RS05320 PF04542 Sigma-70 region 2 AMK58_RS05320 PF08281 Sigma-70, region 4 AMK58_RS05335 PF13432 Tetratricopeptide repeat AMK58_RS05345 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMK58_RS05345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS05350 PF00072 Response regulator receiver domain AMK58_RS05355 PF00571 CBS domain AMK58_RS05360 PF01545 Cation efflux family AMK58_RS05370 PF00117 Glutamine amidotransferase class-I AMK58_RS05370 PF00425 chorismate binding enzyme AMK58_RS05370 PF04715 Anthranilate synthase component I, N terminal region AMK58_RS05375 PF10073 AMK58_RS05375 AMK58_RS05380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS05380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS05385 PF12769 Domain of unknown function (DUF3814) AMK58_RS05390 PF02233 NAD(P) transhydrogenase beta subunit AMK58_RS05395 PF07045 Protein of unknown function (DUF1330) AMK58_RS05400 PF02548 Ketopantoate hydroxymethyltransferase AMK58_RS05405 PF01165 Ribosomal protein S21 AMK58_RS05410 PF01327 Polypeptide deformylase AMK58_RS05415 PF08511 COQ9 AMK58_RS05420 PF04993 TfoX N-terminal domain AMK58_RS05425 PF04386 Stringent starvation protein B AMK58_RS05435 PF02511 Thymidylate synthase complementing protein AMK58_RS05440 PF13176 Tetratricopeptide repeat AMK58_RS05440 PF13181 Tetratricopeptide repeat AMK58_RS05440 PF13432 Tetratricopeptide repeat AMK58_RS05440 PF13844 Glycosyl transferase family 41 AMK58_RS05445 PF06170 AMK58_RS05445 AMK58_RS05455 PF04392 ABC transporter substrate binding protein AMK58_RS05460 PF02653 AMK58_RS05460 AMK58_RS05465 PF00005 ABC transporter AMK58_RS05470 PF00999 Sodium/hydrogen exchanger family AMK58_RS05470 PF02254 TrkA-N domain AMK58_RS05475 PF01883 Domain of unknown function DUF59 AMK58_RS05475 PF10609 ParA/MinD ATPase like AMK58_RS05480 PF01145 SPFH domain / Band 7 family AMK58_RS05485 PF01145 SPFH domain / Band 7 family AMK58_RS05490 PF09838 AMK58_RS05490 AMK58_RS05495 PF00595 PDZ domain (Also known as DHR or GLGF) AMK58_RS05495 PF13180 PDZ domain AMK58_RS05495 PF13365 Trypsin-like peptidase domain AMK58_RS05500 PF12710 haloacid dehalogenase-like hydrolase AMK58_RS05505 PF13473 Cupredoxin-like domain AMK58_RS05510 PF01715 IPP transferase AMK58_RS05515 PF00155 Aminotransferase class I and II AMK58_RS05520 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS05520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS05520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS05525 PF10369 Small subunit of acetolactate synthase AMK58_RS05525 PF13710 ACT domain AMK58_RS05530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMK58_RS05530 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMK58_RS05535 PF01895 PhoU domain AMK58_RS05540 PF03350 AMK58_RS05540 AMK58_RS05545 PF06723 MreB/Mbl protein AMK58_RS05550 PF04085 rod shape-determining protein MreC AMK58_RS05555 PF04093 AMK58_RS05555 AMK58_RS05560 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS05560 PF03717 Penicillin-binding Protein dimerisation domain AMK58_RS05565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS05565 PF00672 HAMP domain AMK58_RS05570 PF09335 AMK58_RS05570 AMK58_RS05575 PF01810 AMK58_RS05575 AMK58_RS05580 PF02608 Basic membrane protein AMK58_RS05585 PF00005 ABC transporter AMK58_RS05590 PF02653 AMK58_RS05590 AMK58_RS05595 PF02653 AMK58_RS05595 AMK58_RS05600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS05605 PF01048 Phosphorylase superfamily AMK58_RS05610 PF01791 DeoC/LacD family aldolase AMK58_RS05615 PF00591 Glycosyl transferase family, a/b domain AMK58_RS05615 PF02885 Glycosyl transferase family, helical bundle domain AMK58_RS05615 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMK58_RS05620 PF01593 Flavin containing amine oxidoreductase AMK58_RS05625 PF00892 EamA-like transporter family AMK58_RS05630 PF13466 STAS domain AMK58_RS05635 PF13458 Periplasmic binding protein AMK58_RS05640 PF02653 AMK58_RS05640 AMK58_RS05645 PF00005 ABC transporter AMK58_RS05645 PF02653 AMK58_RS05645 AMK58_RS05645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS05650 PF00005 ABC transporter AMK58_RS05660 PF00654 Voltage gated chloride channel AMK58_RS05665 PF03976 Polyphosphate kinase 2 (PPK2) AMK58_RS05670 PF03976 Polyphosphate kinase 2 (PPK2) AMK58_RS05675 PF00128 Alpha amylase, catalytic domain AMK58_RS05675 PF11896 Domain of unknown function (DUF3416) AMK58_RS05675 PF14701 glucanotransferase domain of human glycogen debranching enzyme AMK58_RS05685 PF00563 EAL domain AMK58_RS05690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS05690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS05695 PF02586 Uncharacterised ACR, COG2135 AMK58_RS05700 PF00565 Staphylococcal nuclease homologue AMK58_RS05705 PF00072 Response regulator receiver domain AMK58_RS05705 PF08281 Sigma-70, region 4 AMK58_RS05710 PF04226 AMK58_RS05710 AMK58_RS05715 PF00834 Ribulose-phosphate 3 epimerase family AMK58_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS05725 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS05725 PF13602 Zinc-binding dehydrogenase AMK58_RS05730 PF01638 HxlR-like helix-turn-helix AMK58_RS05735 PF05940 AMK58_RS05735 AMK58_RS05740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS05740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS05745 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS05750 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS05755 PF08241 Methyltransferase domain AMK58_RS05760 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS05765 PF05940 AMK58_RS05765 AMK58_RS05775 PF00994 Probable molybdopterin binding domain AMK58_RS05780 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS05780 PF12801 AMK58_RS05780 AMK58_RS05780 PF13746 4Fe-4S dicluster domain AMK58_RS05785 PF04304 AMK58_RS05785 AMK58_RS05790 PF09335 AMK58_RS05790 AMK58_RS05795 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS05800 PF00224 Pyruvate kinase, barrel domain AMK58_RS05800 PF02887 Pyruvate kinase, alpha/beta domain AMK58_RS05805 PF00416 Ribosomal protein S13/S18 AMK58_RS05810 PF00411 Ribosomal protein S11 AMK58_RS05815 PF01000 RNA polymerase Rpb3/RpoA insert domain AMK58_RS05815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMK58_RS05815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMK58_RS05820 PF01196 Ribosomal protein L17 AMK58_RS05825 PF09335 AMK58_RS05825 AMK58_RS05840 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS05840 PF12002 MgsA AAA+ ATPase C terminal AMK58_RS05840 PF16193 AMK58_RS05840 AMK58_RS05850 PF02537 AMK58_RS05850 AMK58_RS05855 PF00849 RNA pseudouridylate synthase AMK58_RS05860 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS05860 PF07729 FCD domain AMK58_RS05865 PF03594 AMK58_RS05865 AMK58_RS05870 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS05875 PF07542 ATP12 chaperone protein AMK58_RS05880 PF03640 AMK58_RS05880 AMK58_RS05885 PF05239 PRC-barrel domain AMK58_RS05890 PF01571 Aminomethyltransferase folate-binding domain AMK58_RS05890 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK58_RS05895 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS05895 PF14760 Rnk N-terminus AMK58_RS05900 PF00005 ABC transporter AMK58_RS05905 PF02653 AMK58_RS05905 AMK58_RS05910 PF02653 AMK58_RS05910 AMK58_RS05915 PF02608 Basic membrane protein AMK58_RS05940 PF00072 Response regulator receiver domain AMK58_RS05940 PF00990 GGDEF domain AMK58_RS05945 PF00156 Phosphoribosyl transferase domain AMK58_RS05945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMK58_RS05950 PF00753 Metallo-beta-lactamase superfamily AMK58_RS05950 PF07521 RNA-metabolising metallo-beta-lactamase AMK58_RS05950 PF10996 Beta-Casp domain AMK58_RS05960 PF00563 EAL domain AMK58_RS05960 PF00990 GGDEF domain AMK58_RS05960 PF03924 CHASE domain AMK58_RS05960 PF08448 PAS fold AMK58_RS05965 PF00106 short chain dehydrogenase AMK58_RS05970 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS05970 PF12867 DinB superfamily AMK58_RS05975 PF10017 AMK58_RS05975 AMK58_RS05980 PF01814 Hemerythrin HHE cation binding domain AMK58_RS05985 PF00809 Pterin binding enzyme AMK58_RS05990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK58_RS05990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK58_RS05990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK58_RS05990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK58_RS05995 PF08543 Phosphomethylpyrimidine kinase AMK58_RS06000 PF00155 Aminotransferase class I and II AMK58_RS06000 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06005 PF11127 Protein of unknown function (DUF2892) AMK58_RS06015 PF01027 Inhibitor of apoptosis-promoting Bax1 AMK58_RS06020 PF10011 Predicted membrane protein (DUF2254) AMK58_RS06025 PF06568 AMK58_RS06025 AMK58_RS06030 PF13673 Acetyltransferase (GNAT) domain AMK58_RS06035 PF02567 Phenazine biosynthesis-like protein AMK58_RS06040 PF01575 MaoC like domain AMK58_RS06045 PF00012 Hsp70 protein AMK58_RS06050 PF00120 Glutamine synthetase, catalytic domain AMK58_RS06050 PF03951 Glutamine synthetase, beta-Grasp domain AMK58_RS06055 PF00543 Nitrogen regulatory protein P-II AMK58_RS06070 PF01256 Carbohydrate kinase AMK58_RS06070 PF03853 YjeF-related protein N-terminus AMK58_RS06075 PF05292 Malonyl-CoA decarboxylase (MCD) AMK58_RS06085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMK58_RS06085 PF05697 Bacterial trigger factor protein (TF) AMK58_RS06085 PF05698 Bacterial trigger factor protein (TF) C-terminus AMK58_RS06090 PF00574 Clp protease AMK58_RS06095 PF06689 ClpX C4-type zinc finger AMK58_RS06095 PF07724 AAA domain (Cdc48 subfamily) AMK58_RS06095 PF10431 C-terminal, D2-small domain, of ClpB protein AMK58_RS06100 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS06100 PF02190 ATP-dependent protease La (LON) domain AMK58_RS06100 PF05362 Lon protease (S16) C-terminal proteolytic domain AMK58_RS06105 PF00216 Bacterial DNA-binding protein AMK58_RS06120 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMK58_RS06125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMK58_RS06130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMK58_RS06135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMK58_RS06140 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMK58_RS06145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMK58_RS06145 PF10531 SLBB domain AMK58_RS06145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK58_RS06150 PF00384 Molybdopterin oxidoreductase AMK58_RS06150 PF09326 AMK58_RS06150 AMK58_RS06150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK58_RS06150 PF13510 2Fe-2S iron-sulfur cluster binding domain AMK58_RS06155 PF00146 NADH dehydrogenase AMK58_RS06160 PF12838 4Fe-4S dicluster domain AMK58_RS06165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMK58_RS06170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMK58_RS06175 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMK58_RS06175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMK58_RS06175 PF06455 AMK58_RS06175 AMK58_RS06180 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMK58_RS06180 PF01059 AMK58_RS06180 AMK58_RS06185 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMK58_RS06190 PF02237 Biotin protein ligase C terminal domain AMK58_RS06190 PF16917 AMK58_RS06190 AMK58_RS06195 PF03309 Type III pantothenate kinase AMK58_RS06200 PF07521 RNA-metabolising metallo-beta-lactamase AMK58_RS06200 PF12706 Beta-lactamase superfamily domain AMK58_RS06205 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS06210 PF07330 AMK58_RS06210 AMK58_RS06215 PF03352 Methyladenine glycosylase AMK58_RS06230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK58_RS06230 PF03129 Anticodon binding domain AMK58_RS06235 PF02687 AMK58_RS06235 AMK58_RS06235 PF12704 MacB-like periplasmic core domain AMK58_RS06240 PF00005 ABC transporter AMK58_RS06245 PF01738 Dienelactone hydrolase family AMK58_RS06250 PF00892 EamA-like transporter family AMK58_RS06260 PF02811 PHP domain AMK58_RS06260 PF07733 Bacterial DNA polymerase III alpha subunit AMK58_RS06260 PF14579 Helix-hairpin-helix motif AMK58_RS06265 PF00318 Ribosomal protein S2 AMK58_RS06270 PF00889 Elongation factor TS AMK58_RS06275 PF00696 Amino acid kinase family AMK58_RS06280 PF01765 Ribosome recycling factor AMK58_RS06285 PF01255 Putative undecaprenyl diphosphate synthase AMK58_RS06290 PF01148 Cytidylyltransferase family AMK58_RS06295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMK58_RS06295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMK58_RS06295 PF13288 DXP reductoisomerase C-terminal domain AMK58_RS06300 PF00595 PDZ domain (Also known as DHR or GLGF) AMK58_RS06300 PF02163 Peptidase family M50 AMK58_RS06305 PF01103 Surface antigen AMK58_RS06305 PF07244 Surface antigen variable number repeat AMK58_RS06310 PF03938 Outer membrane protein (OmpH-like) AMK58_RS06315 PF07977 FabA-like domain AMK58_RS06320 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS06320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMK58_RS06325 PF06230 Protein of unknown function (DUF1009) AMK58_RS06330 PF02684 AMK58_RS06330 AMK58_RS06335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS06340 PF00583 Acetyltransferase (GNAT) family AMK58_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS06345 PF03466 LysR substrate binding domain AMK58_RS06350 PF00043 Glutathione S-transferase, C-terminal domain AMK58_RS06350 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS06360 PF00285 Citrate synthase AMK58_RS06365 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS06370 PF03772 AMK58_RS06370 AMK58_RS06370 PF13567 AMK58_RS06370 AMK58_RS06375 PF00717 Peptidase S24-like AMK58_RS06375 PF01726 LexA DNA binding domain AMK58_RS06380 PF00994 Probable molybdopterin binding domain AMK58_RS06380 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS06380 PF03454 MoeA C-terminal region (domain IV) AMK58_RS06385 PF01967 MoaC family AMK58_RS06390 PF00583 Acetyltransferase (GNAT) family AMK58_RS06395 PF00218 Indole-3-glycerol phosphate synthase AMK58_RS06400 PF00591 Glycosyl transferase family, a/b domain AMK58_RS06400 PF02885 Glycosyl transferase family, helical bundle domain AMK58_RS06405 PF00117 Glutamine amidotransferase class-I AMK58_RS06415 PF04748 Divergent polysaccharide deacetylase AMK58_RS06420 PF00403 Heavy-metal-associated domain AMK58_RS06430 PF00425 chorismate binding enzyme AMK58_RS06430 PF04715 Anthranilate synthase component I, N terminal region AMK58_RS06435 PF13145 PPIC-type PPIASE domain AMK58_RS06435 PF13624 SurA N-terminal domain AMK58_RS06440 PF00121 Triosephosphate isomerase AMK58_RS06445 PF03840 Preprotein translocase SecG subunit AMK58_RS06450 PF00117 Glutamine amidotransferase class-I AMK58_RS06450 PF06418 CTP synthase N-terminus AMK58_RS06455 PF01738 Dienelactone hydrolase family AMK58_RS06460 PF00793 DAHP synthetase I family AMK58_RS06465 PF12836 Helix-hairpin-helix motif AMK58_RS06470 PF04055 Radical SAM superfamily AMK58_RS06470 PF13186 Iron-sulfur cluster-binding domain AMK58_RS06470 PF13353 4Fe-4S single cluster domain AMK58_RS06475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMK58_RS06480 PF03070 TENA/THI-4/PQQC family AMK58_RS06485 PF12706 Beta-lactamase superfamily domain AMK58_RS06490 PF08042 AMK58_RS06490 AMK58_RS06495 PF00113 Enolase, C-terminal TIM barrel domain AMK58_RS06495 PF03952 Enolase, N-terminal domain AMK58_RS06500 PF13174 Tetratricopeptide repeat AMK58_RS06500 PF13432 Tetratricopeptide repeat AMK58_RS06505 PF01171 PP-loop family AMK58_RS06510 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS06510 PF01434 Peptidase family M41 AMK58_RS06510 PF06480 FtsH Extracellular AMK58_RS06515 PF01694 Rhomboid family AMK58_RS06520 PF09834 AMK58_RS06520 AMK58_RS06525 PF08534 Redoxin AMK58_RS06530 PF00221 Aromatic amino acid lyase AMK58_RS06535 PF00005 ABC transporter AMK58_RS06535 PF00664 ABC transporter transmembrane region AMK58_RS06540 PF13437 HlyD family secretion protein AMK58_RS06540 PF13533 Biotin-lipoyl like AMK58_RS06545 PF00072 Response regulator receiver domain AMK58_RS06560 PF12697 Alpha/beta hydrolase family AMK58_RS06565 PF03023 AMK58_RS06565 AMK58_RS06570 PF00581 Rhodanese-like domain AMK58_RS06575 PF01052 Surface presentation of antigens (SPOA) AMK58_RS06580 PF10073 AMK58_RS06580 AMK58_RS06585 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS06590 PF00155 Aminotransferase class I and II AMK58_RS06595 PF00574 Clp protease AMK58_RS06605 PF00005 ABC transporter AMK58_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS06615 PF09084 NMT1/THI5 like AMK58_RS06620 PF03960 ArsC family AMK58_RS06625 PF00072 Response regulator receiver domain AMK58_RS06625 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06625 PF12860 AMK58_RS06625 AMK58_RS06625 PF13188 PAS domain AMK58_RS06630 PF00072 Response regulator receiver domain AMK58_RS06635 PF00072 Response regulator receiver domain AMK58_RS06635 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06635 PF12860 AMK58_RS06635 AMK58_RS06635 PF13188 PAS domain AMK58_RS06635 PF13426 PAS domain AMK58_RS06640 PF00072 Response regulator receiver domain AMK58_RS06645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS06645 PF00672 HAMP domain AMK58_RS06645 PF17200 AMK58_RS06645 AMK58_RS06650 PF12697 Alpha/beta hydrolase family AMK58_RS06660 PF07883 Cupin domain AMK58_RS06665 PF13454 FAD-NAD(P)-binding AMK58_RS06675 PF00072 Response regulator receiver domain AMK58_RS06675 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS06680 PF01745 Isopentenyl transferase AMK58_RS06690 PF03091 CutA1 divalent ion tolerance protein AMK58_RS06695 PF07690 Major Facilitator Superfamily AMK58_RS06700 PF05036 Sporulation related domain AMK58_RS06705 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS06710 PF13380 CoA binding domain AMK58_RS06715 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS06720 PF03061 Thioesterase superfamily AMK58_RS06725 PF00572 Ribosomal protein L13 AMK58_RS06730 PF00380 Ribosomal protein S9/S16 AMK58_RS06735 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS06735 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS06740 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS06745 PF00691 OmpA family AMK58_RS06750 PF00561 alpha/beta hydrolase fold AMK58_RS06750 PF07167 AMK58_RS06750 AMK58_RS06760 PF01047 MarR family AMK58_RS06765 PF07690 Major Facilitator Superfamily AMK58_RS06775 PF00155 Aminotransferase class I and II AMK58_RS06780 PF00742 Homoserine dehydrogenase AMK58_RS06780 PF01842 ACT domain AMK58_RS06780 PF03447 Homoserine dehydrogenase, NAD binding domain AMK58_RS06785 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMK58_RS06790 PF00465 Iron-containing alcohol dehydrogenase AMK58_RS06795 PF01368 DHH family AMK58_RS06795 PF02272 DHHA1 domain AMK58_RS06805 PF04851 Type III restriction enzyme, res subunit AMK58_RS06805 PF08463 AMK58_RS06805 AMK58_RS06805 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AMK58_RS06810 PF02384 N-6 DNA Methylase AMK58_RS06810 PF12161 HsdM N-terminal domain AMK58_RS06815 PF01420 Type I restriction modification DNA specificity domain AMK58_RS06845 PF12532 AMK58_RS06845 AMK58_RS06855 PF00589 Phage integrase family AMK58_RS06860 PF00248 Aldo/keto reductase family AMK58_RS06870 PF07690 Major Facilitator Superfamily AMK58_RS06875 PF00850 Histone deacetylase domain AMK58_RS06880 PF00583 Acetyltransferase (GNAT) family AMK58_RS06885 PF02558 Ketopantoate reductase PanE/ApbA AMK58_RS06885 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMK58_RS06890 PF00571 CBS domain AMK58_RS06895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS06895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS06900 PF12769 Domain of unknown function (DUF3814) AMK58_RS06905 PF02233 NAD(P) transhydrogenase beta subunit AMK58_RS06910 PF00571 CBS domain AMK58_RS06910 PF04972 BON domain AMK58_RS06915 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06915 PF07729 FCD domain AMK58_RS06920 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS06920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS06920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS06925 PF02515 CoA-transferase family III AMK58_RS06930 PF00549 CoA-ligase AMK58_RS06930 PF08442 ATP-grasp domain AMK58_RS06935 PF00549 CoA-ligase AMK58_RS06935 PF02629 CoA binding domain AMK58_RS06940 PF07690 Major Facilitator Superfamily AMK58_RS06945 PF07690 Major Facilitator Superfamily AMK58_RS06955 PF01964 ThiC family AMK58_RS06955 PF13667 ThiC-associated domain AMK58_RS06960 PF07690 Major Facilitator Superfamily AMK58_RS06965 PF05161 MOFRL family AMK58_RS06965 PF13660 Domain of unknown function (DUF4147) AMK58_RS06970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK58_RS06970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK58_RS06975 PF01261 Xylose isomerase-like TIM barrel AMK58_RS06980 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS06980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS06980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS06985 PF02581 Thiamine monophosphate synthase/TENI AMK58_RS06990 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS06990 PF07729 FCD domain AMK58_RS06995 PF00224 Pyruvate kinase, barrel domain AMK58_RS06995 PF02887 Pyruvate kinase, alpha/beta domain AMK58_RS07005 PF00391 PEP-utilising enzyme, mobile domain AMK58_RS07005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMK58_RS07010 PF00571 CBS domain AMK58_RS07015 PF01925 AMK58_RS07015 AMK58_RS07020 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS07025 PF09723 AMK58_RS07025 AMK58_RS07030 PF00158 Sigma-54 interaction domain AMK58_RS07030 PF00989 PAS fold AMK58_RS07035 PF01266 FAD dependent oxidoreductase AMK58_RS07040 PF05239 PRC-barrel domain AMK58_RS07045 PF01965 DJ-1/PfpI family AMK58_RS07050 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07055 PF00072 Response regulator receiver domain AMK58_RS07055 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07060 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK58_RS07060 PF00941 FAD binding domain in molybdopterin dehydrogenase AMK58_RS07060 PF01799 [2Fe-2S] binding domain AMK58_RS07060 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS07070 PF01774 UreD urease accessory protein AMK58_RS07075 PF00547 Urease, gamma subunit AMK58_RS07080 PF00699 Urease beta subunit AMK58_RS07085 PF00449 Urease alpha-subunit, N-terminal domain AMK58_RS07085 PF01979 Amidohydrolase family AMK58_RS07090 PF01177 Asp/Glu/Hydantoin racemase AMK58_RS07095 PF02814 UreE urease accessory protein, N-terminal domain AMK58_RS07095 PF05194 UreE urease accessory protein, C-terminal domain AMK58_RS07100 PF01730 UreF AMK58_RS07105 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS07110 PF05239 PRC-barrel domain AMK58_RS07115 PF11127 Protein of unknown function (DUF2892) AMK58_RS07120 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS07125 PF01814 Hemerythrin HHE cation binding domain AMK58_RS07130 PF05013 N-formylglutamate amidohydrolase AMK58_RS07135 PF01022 Bacterial regulatory protein, arsR family AMK58_RS07140 PF11736 Protein of unknown function (DUF3299) AMK58_RS07150 PF13579 Glycosyl transferase 4-like domain AMK58_RS07160 PF00535 Glycosyl transferase family 2 AMK58_RS07165 PF01381 Helix-turn-helix AMK58_RS07170 PF00535 Glycosyl transferase family 2 AMK58_RS07175 PF02563 Polysaccharide biosynthesis/export protein AMK58_RS07175 PF06251 Capsule biosynthesis GfcC AMK58_RS07175 PF10531 SLBB domain AMK58_RS07180 PF12118 AMK58_RS07180 AMK58_RS07185 PF00795 Carbon-nitrogen hydrolase AMK58_RS07190 PF01047 MarR family AMK58_RS07195 PF00805 Pentapeptide repeats (8 copies) AMK58_RS07200 PF01895 PhoU domain AMK58_RS07205 PF06150 ChaB AMK58_RS07215 PF13180 PDZ domain AMK58_RS07215 PF13365 Trypsin-like peptidase domain AMK58_RS07220 PF00535 Glycosyl transferase family 2 AMK58_RS07225 PF07578 Lipid A Biosynthesis N-terminal domain AMK58_RS07230 PF13231 AMK58_RS07230 AMK58_RS07240 PF00480 ROK family AMK58_RS07250 PF02653 AMK58_RS07250 AMK58_RS07255 PF02653 AMK58_RS07255 AMK58_RS07255 PF11862 AMK58_RS07255 AMK58_RS07260 PF00005 ABC transporter AMK58_RS07260 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS07265 PF00005 ABC transporter AMK58_RS07275 PF13458 Periplasmic binding protein AMK58_RS07290 PF00691 OmpA family AMK58_RS07290 PF13505 Outer membrane protein beta-barrel domain AMK58_RS07295 PF00072 Response regulator receiver domain AMK58_RS07295 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS07300 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS07300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMK58_RS07305 PF12838 4Fe-4S dicluster domain AMK58_RS07310 PF14325 AMK58_RS07310 AMK58_RS07315 PF00849 RNA pseudouridylate synthase AMK58_RS07320 PF00106 short chain dehydrogenase AMK58_RS07325 PF00156 Phosphoribosyl transferase domain AMK58_RS07325 PF13522 Glutamine amidotransferase domain AMK58_RS07330 PF02674 AMK58_RS07330 AMK58_RS07335 PF13481 AAA domain AMK58_RS07335 PF13541 Subunit ChlI of Mg-chelatase AMK58_RS07340 PF00557 Metallopeptidase family M24 AMK58_RS07345 PF00293 NUDIX domain AMK58_RS07355 PF00005 ABC transporter AMK58_RS07360 PF02405 AMK58_RS07360 AMK58_RS07365 PF00842 Alanine racemase, C-terminal domain AMK58_RS07365 PF01168 Alanine racemase, N-terminal domain AMK58_RS07370 PF00772 DnaB-like helicase N terminal domain AMK58_RS07370 PF03796 DnaB-like helicase C terminal domain AMK58_RS07375 PF02353 Mycolic acid cyclopropane synthetase AMK58_RS07380 PF01281 Ribosomal protein L9, N-terminal domain AMK58_RS07380 PF03948 Ribosomal protein L9, C-terminal domain AMK58_RS07385 PF09991 AMK58_RS07385 AMK58_RS07390 PF01084 Ribosomal protein S18 AMK58_RS07395 PF01250 Ribosomal protein S6 AMK58_RS07400 PF00698 Acyl transferase domain AMK58_RS07405 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS07410 PF00550 Phosphopantetheine attachment site AMK58_RS07415 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS07415 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS07420 PF02618 YceG-like family AMK58_RS07430 PF01464 Transglycosylase SLT domain AMK58_RS07435 PF00701 Dihydrodipicolinate synthetase family AMK58_RS07440 PF01668 SmpB protein AMK58_RS07445 PF05175 Methyltransferase small domain AMK58_RS07445 PF08468 Methyltransferase small domain N-terminal AMK58_RS07450 PF12833 Helix-turn-helix domain AMK58_RS07455 PF01161 Phosphatidylethanolamine-binding protein AMK58_RS07460 PF00490 Delta-aminolevulinic acid dehydratase AMK58_RS07465 PF00149 Calcineurin-like phosphoesterase AMK58_RS07470 PF00781 Diacylglycerol kinase catalytic domain AMK58_RS07475 PF16113 AMK58_RS07475 AMK58_RS07480 PF13463 Winged helix DNA-binding domain AMK58_RS07485 PF00005 ABC transporter AMK58_RS07485 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS07490 PF00005 ABC transporter AMK58_RS07495 PF13458 Periplasmic binding protein AMK58_RS07500 PF02653 AMK58_RS07500 AMK58_RS07505 PF02653 AMK58_RS07505 AMK58_RS07510 PF14196 AMK58_RS07510 AMK58_RS07515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS07515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS07520 PF09361 AMK58_RS07520 AMK58_RS07525 PF00149 Calcineurin-like phosphoesterase AMK58_RS07525 PF02872 5'-nucleotidase, C-terminal domain AMK58_RS07530 PF00117 Glutamine amidotransferase class-I AMK58_RS07535 PF12804 MobA-like NTP transferase domain AMK58_RS07540 PF13478 XdhC Rossmann domain AMK58_RS07545 PF02625 XdhC and CoxI family AMK58_RS07550 PF05762 VWA domain containing CoxE-like protein AMK58_RS07555 PF07728 AAA domain (dynein-related subfamily) AMK58_RS07560 PF00941 FAD binding domain in molybdopterin dehydrogenase AMK58_RS07560 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07565 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07565 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK58_RS07570 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK58_RS07570 PF01799 [2Fe-2S] binding domain AMK58_RS07575 PF16868 AMK58_RS07575 AMK58_RS07580 PF06808 AMK58_RS07580 AMK58_RS07585 PF08905 AMK58_RS07585 AMK58_RS07590 PF16980 AMK58_RS07590 AMK58_RS07595 PF00582 Universal stress protein family AMK58_RS07600 PF06707 Protein of unknown function (DUF1194) AMK58_RS07605 PF00850 Histone deacetylase domain AMK58_RS07620 PF02643 Uncharacterized ACR, COG1430 AMK58_RS07635 PF04800 ETC complex I subunit conserved region AMK58_RS07650 PF01502 Phosphoribosyl-AMP cyclohydrolase AMK58_RS07655 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS07660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07675 PF00005 ABC transporter AMK58_RS07680 PF00155 Aminotransferase class I and II AMK58_RS07685 PF00892 EamA-like transporter family AMK58_RS07690 PF00583 Acetyltransferase (GNAT) family AMK58_RS07695 PF00583 Acetyltransferase (GNAT) family AMK58_RS07700 PF00581 Rhodanese-like domain AMK58_RS07705 PF01411 tRNA synthetases class II (A) AMK58_RS07705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS07710 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS07715 PF00293 NUDIX domain AMK58_RS07720 PF13180 PDZ domain AMK58_RS07720 PF13365 Trypsin-like peptidase domain AMK58_RS07745 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMK58_RS07750 PF00581 Rhodanese-like domain AMK58_RS07755 PF02321 Outer membrane efflux protein AMK58_RS07760 PF10691 AMK58_RS07760 AMK58_RS07765 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS07765 PF08264 Anticodon-binding domain of tRNA AMK58_RS07765 PF10458 Valyl tRNA synthetase tRNA binding arm AMK58_RS07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS07770 PF00672 HAMP domain AMK58_RS07775 PF02698 DUF218 domain AMK58_RS07780 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMK58_RS07780 PF05036 Sporulation related domain AMK58_RS07785 PF00768 D-alanyl-D-alanine carboxypeptidase AMK58_RS07785 PF07943 Penicillin-binding protein 5, C-terminal domain AMK58_RS07790 PF02223 Thymidylate kinase AMK58_RS07795 PF13177 DNA polymerase III, delta subunit AMK58_RS07800 PF09334 tRNA synthetases class I (M) AMK58_RS07805 PF01026 TatD related DNase AMK58_RS07810 PF12706 Beta-lactamase superfamily domain AMK58_RS07820 PF14326 AMK58_RS07820 AMK58_RS07825 PF13672 Protein phosphatase 2C AMK58_RS07835 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMK58_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS07850 PF00005 ABC transporter AMK58_RS07850 PF08402 TOBE domain AMK58_RS07855 PF13416 Bacterial extracellular solute-binding protein AMK58_RS07860 PF00120 Glutamine synthetase, catalytic domain AMK58_RS07865 PF01266 FAD dependent oxidoreductase AMK58_RS07875 PF01794 AMK58_RS07875 AMK58_RS07875 PF08022 AMK58_RS07875 AMK58_RS07880 PF12831 FAD dependent oxidoreductase AMK58_RS07885 PF04230 AMK58_RS07885 AMK58_RS07895 PF03741 AMK58_RS07895 AMK58_RS07900 PF00216 Bacterial DNA-binding protein AMK58_RS07905 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS07910 PF13420 Acetyltransferase (GNAT) domain AMK58_RS07915 PF04542 Sigma-70 region 2 AMK58_RS07915 PF04545 Sigma-70, region 4 AMK58_RS07920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS07920 PF11563 Protoglobin AMK58_RS07925 PF00583 Acetyltransferase (GNAT) family AMK58_RS07940 PF01810 AMK58_RS07940 AMK58_RS07945 PF02493 MORN repeat AMK58_RS07950 PF02391 MoaE protein AMK58_RS07955 PF02597 ThiS family AMK58_RS07960 PF00994 Probable molybdopterin binding domain AMK58_RS07960 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS07960 PF03454 MoeA C-terminal region (domain IV) AMK58_RS07965 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AMK58_RS07970 PF01066 CDP-alcohol phosphatidyltransferase AMK58_RS07975 PF01541 GIY-YIG catalytic domain AMK58_RS07975 PF02151 UvrB/uvrC motif AMK58_RS07975 PF08459 UvrC Helix-hairpin-helix N-terminal AMK58_RS07975 PF12826 Helix-hairpin-helix motif AMK58_RS07980 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS07990 PF03692 AMK58_RS07990 AMK58_RS08020 PF00501 AMP-binding enzyme AMK58_RS08020 PF00550 Phosphopantetheine attachment site AMK58_RS08020 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08025 PF05681 AMK58_RS08025 AMK58_RS08025 PF05683 Fumarase C-terminus AMK58_RS08030 PF01926 50S ribosome-binding GTPase AMK58_RS08030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMK58_RS08035 PF13360 PQQ-like domain AMK58_RS08040 PF09976 Tetratricopeptide repeat AMK58_RS08045 PF00578 AhpC/TSA family AMK58_RS08050 PF00072 Response regulator receiver domain AMK58_RS08050 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08055 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08060 PF00072 Response regulator receiver domain AMK58_RS08060 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08065 PF13401 AAA domain AMK58_RS08075 PF02705 AMK58_RS08075 AMK58_RS08080 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS08085 PF00072 Response regulator receiver domain AMK58_RS08085 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08085 PF01627 Hpt domain AMK58_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08085 PF02743 Cache domain AMK58_RS08085 PF13426 PAS domain AMK58_RS08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS08095 PF00989 PAS fold AMK58_RS08100 PF00989 PAS fold AMK58_RS08100 PF00990 GGDEF domain AMK58_RS08100 PF08448 PAS fold AMK58_RS08100 PF13188 PAS domain AMK58_RS08105 PF00155 Aminotransferase class I and II AMK58_RS08110 PF03186 AMK58_RS08110 AMK58_RS08115 PF03435 Saccharopine dehydrogenase AMK58_RS08115 PF16653 AMK58_RS08115 AMK58_RS08120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMK58_RS08120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMK58_RS08125 PF01814 Hemerythrin HHE cation binding domain AMK58_RS08130 PF03079 ARD/ARD' family AMK58_RS08135 PF07690 Major Facilitator Superfamily AMK58_RS08140 PF13468 Glyoxalase-like domain AMK58_RS08145 PF13279 Thioesterase-like superfamily AMK58_RS08150 PF13411 MerR HTH family regulatory protein AMK58_RS08155 PF00501 AMP-binding enzyme AMK58_RS08155 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08160 PF02036 SCP-2 sterol transfer family AMK58_RS08170 PF07369 Protein of unknown function (DUF1488) AMK58_RS08175 PF00005 ABC transporter AMK58_RS08180 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS08185 PF13379 NMT1-like family AMK58_RS08190 PF00009 Elongation factor Tu GTP binding domain AMK58_RS08190 PF01583 Adenylylsulphate kinase AMK58_RS08195 PF01507 Phosphoadenosine phosphosulfate reductase family AMK58_RS08200 PF01507 Phosphoadenosine phosphosulfate reductase family AMK58_RS08205 PF13241 Putative NAD(P)-binding AMK58_RS08205 PF14824 Sirohaem biosynthesis protein central AMK58_RS08210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK58_RS08215 PF11011 AMK58_RS08215 AMK58_RS08220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMK58_RS08220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMK58_RS08225 PF06073 AMK58_RS08225 AMK58_RS08235 PF00027 Cyclic nucleotide-binding domain AMK58_RS08235 PF00999 Sodium/hydrogen exchanger family AMK58_RS08250 PF13411 MerR HTH family regulatory protein AMK58_RS08255 PF00216 Bacterial DNA-binding protein AMK58_RS08260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMK58_RS08260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMK58_RS08265 PF02504 Fatty acid synthesis protein AMK58_RS08270 PF01783 Ribosomal L32p protein family AMK58_RS08275 PF02620 AMK58_RS08275 AMK58_RS08280 PF03981 AMK58_RS08280 AMK58_RS08285 PF04355 SmpA / OmlA family AMK58_RS08290 PF03030 Inorganic H+ pyrophosphatase AMK58_RS08300 PF00586 AIR synthase related protein, N-terminal domain AMK58_RS08300 PF02769 AIR synthase related protein, C-terminal domain AMK58_RS08305 PF01029 NusB family AMK58_RS08310 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMK58_RS08315 PF00925 GTP cyclohydrolase II AMK58_RS08315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMK58_RS08320 PF00677 Lumazine binding domain AMK58_RS08325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS08325 PF01872 RibD C-terminal domain AMK58_RS08330 PF03477 ATP cone domain AMK58_RS08335 PF00464 Serine hydroxymethyltransferase AMK58_RS08340 PF02502 Ribose/Galactose Isomerase AMK58_RS08345 PF05443 ROS/MUCR transcriptional regulator protein AMK58_RS08360 PF05974 Domain of unknown function (DUF892) AMK58_RS08375 PF04343 AMK58_RS08375 AMK58_RS08380 PF13673 Acetyltransferase (GNAT) domain AMK58_RS08390 PF01068 ATP dependent DNA ligase domain AMK58_RS08390 PF04675 DNA ligase N terminus AMK58_RS08390 PF04679 ATP dependent DNA ligase C terminal region AMK58_RS08395 PF12706 Beta-lactamase superfamily domain AMK58_RS08400 PF04227 Indigoidine synthase A like protein AMK58_RS08410 PF01048 Phosphorylase superfamily AMK58_RS08415 PF01694 Rhomboid family AMK58_RS08420 PF04357 AMK58_RS08420 AMK58_RS08425 PF01103 Surface antigen AMK58_RS08425 PF07244 Surface antigen variable number repeat AMK58_RS08430 PF00009 Elongation factor Tu GTP binding domain AMK58_RS08430 PF00679 Elongation factor G C-terminus AMK58_RS08430 PF03144 Elongation factor Tu domain 2 AMK58_RS08435 PF02566 OsmC-like protein AMK58_RS08445 PF01230 HIT domain AMK58_RS08450 PF13641 Glycosyltransferase like family 2 AMK58_RS08455 PF13545 Crp-like helix-turn-helix domain AMK58_RS08460 PF00072 Response regulator receiver domain AMK58_RS08465 PF00027 Cyclic nucleotide-binding domain AMK58_RS08465 PF13545 Crp-like helix-turn-helix domain AMK58_RS08475 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AMK58_RS08480 PF00195 Chalcone and stilbene synthases, N-terminal domain AMK58_RS08480 PF02797 Chalcone and stilbene synthases, C-terminal domain AMK58_RS08485 PF04367 AMK58_RS08485 AMK58_RS08495 PF00872 AMK58_RS08495 AMK58_RS08500 PF00270 DEAD/DEAH box helicase AMK58_RS08500 PF00271 Helicase conserved C-terminal domain AMK58_RS08500 PF17191 AMK58_RS08500 AMK58_RS08505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS08505 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMK58_RS08510 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMK58_RS08515 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMK58_RS08520 PF10503 Esterase PHB depolymerase AMK58_RS08540 PF01323 DSBA-like thioredoxin domain AMK58_RS08545 PF00472 RF-1 domain AMK58_RS08550 PF05239 PRC-barrel domain AMK58_RS08555 PF01594 AMK58_RS08555 AMK58_RS08560 PF13840 ACT domain AMK58_RS08565 PF00270 DEAD/DEAH box helicase AMK58_RS08565 PF00271 Helicase conserved C-terminal domain AMK58_RS08565 PF02559 CarD-like/TRCF domain AMK58_RS08565 PF03461 TRCF domain AMK58_RS08570 PF03937 Flavinator of succinate dehydrogenase AMK58_RS08575 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS08585 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS08585 PF12867 DinB superfamily AMK58_RS08595 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMK58_RS08600 PF03748 AMK58_RS08600 AMK58_RS08605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK58_RS08605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS08610 PF05067 Manganese containing catalase AMK58_RS08615 PF07690 Major Facilitator Superfamily AMK58_RS08620 PF01474 Class-II DAHP synthetase family AMK58_RS08625 PF03748 AMK58_RS08625 AMK58_RS08630 PF00171 Aldehyde dehydrogenase family AMK58_RS08635 PF02569 Pantoate-beta-alanine ligase AMK58_RS08655 PF11306 Protein of unknown function (DUF3108) AMK58_RS08665 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS08670 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS08670 PF12804 MobA-like NTP transferase domain AMK58_RS08670 PF14602 Hexapeptide repeat of succinyl-transferase AMK58_RS08675 PF01380 SIS domain AMK58_RS08675 PF13522 Glutamine amidotransferase domain AMK58_RS08680 PF05951 AMK58_RS08680 AMK58_RS08685 PF00805 Pentapeptide repeats (8 copies) AMK58_RS08690 PF00301 Rubredoxin AMK58_RS08695 PF01037 AsnC family AMK58_RS08695 PF13404 AsnC-type helix-turn-helix domain AMK58_RS08700 PF01810 AMK58_RS08700 AMK58_RS08705 PF01734 Patatin-like phospholipase AMK58_RS08710 PF01728 FtsJ-like methyltransferase AMK58_RS08715 PF00326 Prolyl oligopeptidase family AMK58_RS08720 PF04324 BFD-like [2Fe-2S] binding domain AMK58_RS08730 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08735 PF00072 Response regulator receiver domain AMK58_RS08735 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS08740 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS08740 PF00989 PAS fold AMK58_RS08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS08745 PF03480 Bacterial extracellular solute-binding protein, family 7 AMK58_RS08750 PF04290 AMK58_RS08750 AMK58_RS08755 PF06808 AMK58_RS08755 AMK58_RS08760 PF03831 PhnA protein AMK58_RS08760 PF08274 PhnA Zinc-Ribbon AMK58_RS08765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS08765 PF00672 HAMP domain AMK58_RS08770 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS08775 PF00384 Molybdopterin oxidoreductase AMK58_RS08775 PF01568 Molydopterin dinucleotide binding domain AMK58_RS08775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS08780 PF03060 Nitronate monooxygenase AMK58_RS08785 PF00990 GGDEF domain AMK58_RS08790 PF00805 Pentapeptide repeats (8 copies) AMK58_RS08795 PF13279 Thioesterase-like superfamily AMK58_RS08800 PF00809 Pterin binding enzyme AMK58_RS08800 PF02310 B12 binding domain AMK58_RS08800 PF02574 Homocysteine S-methyltransferase AMK58_RS08800 PF02607 B12 binding domain AMK58_RS08800 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMK58_RS08805 PF01724 Domain of unknown function DUF29 AMK58_RS08810 PF02219 Methylenetetrahydrofolate reductase AMK58_RS08815 PF01022 Bacterial regulatory protein, arsR family AMK58_RS08815 PF08241 Methyltransferase domain AMK58_RS08820 PF04333 AMK58_RS08820 AMK58_RS08825 PF05494 Toluene tolerance, Ttg2 AMK58_RS08830 PF00805 Pentapeptide repeats (8 copies) AMK58_RS08835 PF00005 ABC transporter AMK58_RS08835 PF12848 ABC transporter AMK58_RS08840 PF02639 AMK58_RS08840 AMK58_RS08845 PF00929 Exonuclease AMK58_RS08845 PF13188 PAS domain AMK58_RS08865 PF00210 Ferritin-like domain AMK58_RS08870 PF02446 4-alpha-glucanotransferase AMK58_RS08875 PF00072 Response regulator receiver domain AMK58_RS08880 PF00128 Alpha amylase, catalytic domain AMK58_RS08880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS08885 PF00128 Alpha amylase, catalytic domain AMK58_RS08885 PF02806 Alpha amylase, C-terminal all-beta domain AMK58_RS08885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK58_RS08890 PF00128 Alpha amylase, catalytic domain AMK58_RS08890 PF16657 AMK58_RS08890 AMK58_RS08895 PF01814 Hemerythrin HHE cation binding domain AMK58_RS08900 PF00583 Acetyltransferase (GNAT) family AMK58_RS08905 PF00459 Inositol monophosphatase family AMK58_RS08910 PF04305 AMK58_RS08910 AMK58_RS08920 PF01636 Phosphotransferase enzyme family AMK58_RS08925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK58_RS08925 PF02770 Acyl-CoA dehydrogenase, middle domain AMK58_RS08925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK58_RS08930 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS08935 PF00501 AMP-binding enzyme AMK58_RS08935 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS08940 PF00027 Cyclic nucleotide-binding domain AMK58_RS08940 PF13545 Crp-like helix-turn-helix domain AMK58_RS08945 PF00656 Caspase domain AMK58_RS08945 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS08950 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK58_RS08950 PF05226 AMK58_RS08950 AMK58_RS08955 PF14326 AMK58_RS08955 AMK58_RS08960 PF06620 AMK58_RS08960 AMK58_RS08970 PF00691 OmpA family AMK58_RS08975 PF01471 Putative peptidoglycan binding domain AMK58_RS08975 PF14326 AMK58_RS08975 AMK58_RS08980 PF14347 AMK58_RS08980 AMK58_RS08985 PF14347 AMK58_RS08985 AMK58_RS08990 PF00027 Cyclic nucleotide-binding domain AMK58_RS08990 PF00924 Mechanosensitive ion channel AMK58_RS08995 PF10098 AMK58_RS08995 AMK58_RS09000 PF13463 Winged helix DNA-binding domain AMK58_RS09005 PF12697 Alpha/beta hydrolase family AMK58_RS09020 PF13649 Methyltransferase domain AMK58_RS09035 PF00270 DEAD/DEAH box helicase AMK58_RS09035 PF00271 Helicase conserved C-terminal domain AMK58_RS09035 PF08494 AMK58_RS09035 AMK58_RS09040 PF00149 Calcineurin-like phosphoesterase AMK58_RS09045 PF02469 Fasciclin domain AMK58_RS09050 PF00875 DNA photolyase AMK58_RS09050 PF03441 FAD binding domain of DNA photolyase AMK58_RS09055 PF05787 Bacterial protein of unknown function (DUF839) AMK58_RS09060 PF01475 Ferric uptake regulator family AMK58_RS09065 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS09065 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK58_RS09075 PF00535 Glycosyl transferase family 2 AMK58_RS09080 PF03600 Citrate transporter AMK58_RS09085 PF12706 Beta-lactamase superfamily domain AMK58_RS09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS09100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS09105 PF01545 Cation efflux family AMK58_RS09105 PF16916 AMK58_RS09105 AMK58_RS09110 PF01243 Pyridoxamine 5'-phosphate oxidase AMK58_RS09110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMK58_RS09115 PF16998 AMK58_RS09115 AMK58_RS09120 PF00226 DnaJ domain AMK58_RS09120 PF01556 DnaJ C terminal domain AMK58_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS09125 PF01434 Peptidase family M41 AMK58_RS09130 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS09135 PF00672 HAMP domain AMK58_RS09135 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS09140 PF00072 Response regulator receiver domain AMK58_RS09140 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09150 PF09345 AMK58_RS09150 AMK58_RS09160 PF00072 Response regulator receiver domain AMK58_RS09160 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09160 PF11849 AMK58_RS09160 AMK58_RS09185 PF00893 Small Multidrug Resistance protein AMK58_RS09190 PF00106 short chain dehydrogenase AMK58_RS09195 PF02566 OsmC-like protein AMK58_RS09200 PF11164 AMK58_RS09200 AMK58_RS09205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK58_RS09210 PF00583 Acetyltransferase (GNAT) family AMK58_RS09215 PF00892 EamA-like transporter family AMK58_RS09220 PF00733 Asparagine synthase AMK58_RS09220 PF13537 Glutamine amidotransferase domain AMK58_RS09230 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS09235 PF13477 Glycosyl transferase 4-like AMK58_RS09235 PF13692 Glycosyl transferases group 1 AMK58_RS09240 PF00953 Glycosyl transferase family 4 AMK58_RS09245 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS09250 PF02719 Polysaccharide biosynthesis protein AMK58_RS09250 PF13727 CoA-binding domain AMK58_RS09260 PF00691 OmpA family AMK58_RS09265 PF04052 TolB amino-terminal domain AMK58_RS09265 PF07676 WD40-like Beta Propeller Repeat AMK58_RS09275 PF02472 Biopolymer transport protein ExbD/TolR AMK58_RS09280 PF01618 AMK58_RS09280 AMK58_RS09285 PF03061 Thioesterase superfamily AMK58_RS09290 PF05491 Holliday junction DNA helicase ruvB C-terminus AMK58_RS09290 PF05496 Holliday junction DNA helicase ruvB N-terminus AMK58_RS09295 PF01330 RuvA N terminal domain AMK58_RS09295 PF07499 RuvA, C-terminal domain AMK58_RS09295 PF14520 Helix-hairpin-helix domain AMK58_RS09300 PF02075 Crossover junction endodeoxyribonuclease RuvC AMK58_RS09300 PF04480 Protein of unknown function (DUF559) AMK58_RS09305 PF01709 Transcriptional regulator AMK58_RS09310 PF13277 YmdB-like protein AMK58_RS09315 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMK58_RS09325 PF05164 Cell division protein ZapA AMK58_RS09335 PF00456 Transketolase, thiamine diphosphate binding domain AMK58_RS09335 PF02779 Transketolase, pyrimidine binding domain AMK58_RS09335 PF02780 Transketolase, C-terminal domain AMK58_RS09340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMK58_RS09340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMK58_RS09345 PF05534 AMK58_RS09345 AMK58_RS09360 PF01791 DeoC/LacD family aldolase AMK58_RS09365 PF02581 Thiamine monophosphate synthase/TENI AMK58_RS09370 PF01925 AMK58_RS09370 AMK58_RS09375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMK58_RS09380 PF00107 Zinc-binding dehydrogenase AMK58_RS09380 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS09385 PF00152 tRNA synthetases class II (D, K and N) AMK58_RS09390 PF01132 Elongation factor P (EF-P) OB domain AMK58_RS09390 PF08207 Elongation factor P (EF-P) KOW-like domain AMK58_RS09390 PF09285 Elongation factor P, C-terminal AMK58_RS09395 PF00459 Inositol monophosphatase family AMK58_RS09400 PF00691 OmpA family AMK58_RS09410 PF00691 OmpA family AMK58_RS09415 PF02347 Glycine cleavage system P-protein AMK58_RS09420 PF02347 Glycine cleavage system P-protein AMK58_RS09425 PF01597 Glycine cleavage H-protein AMK58_RS09430 PF01571 Aminomethyltransferase folate-binding domain AMK58_RS09430 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK58_RS09435 PF09360 Iron-binding zinc finger CDGSH type AMK58_RS09445 PF02401 LytB protein AMK58_RS09450 PF01636 Phosphotransferase enzyme family AMK58_RS09455 PF00075 RNase H AMK58_RS09460 PF00501 AMP-binding enzyme AMK58_RS09460 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS09465 PF08534 Redoxin AMK58_RS09470 PF11412 Disulphide bond corrector protein DsbC AMK58_RS09470 PF13899 Thioredoxin-like AMK58_RS09475 PF02622 Uncharacterized ACR, COG1678 AMK58_RS09485 PF13302 Acetyltransferase (GNAT) domain AMK58_RS09490 PF00675 Insulinase (Peptidase family M16) AMK58_RS09490 PF05193 Peptidase M16 inactive domain AMK58_RS09495 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS09495 PF14821 Threonine synthase N terminus AMK58_RS09500 PF00150 Cellulase (glycosyl hydrolase family 5) AMK58_RS09505 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AMK58_RS09510 PF02104 AMK58_RS09510 AMK58_RS09515 PF06170 AMK58_RS09515 AMK58_RS09520 PF00510 Cytochrome c oxidase subunit III AMK58_RS09525 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMK58_RS09530 PF01040 UbiA prenyltransferase family AMK58_RS09535 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK58_RS09540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMK58_RS09540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMK58_RS09545 PF11902 AMK58_RS09545 AMK58_RS09550 PF01523 Putative modulator of DNA gyrase AMK58_RS09555 PF13740 ACT domain AMK58_RS09560 PF06082 AMK58_RS09560 AMK58_RS09570 PF07043 AMK58_RS09570 AMK58_RS09575 PF04542 Sigma-70 region 2 AMK58_RS09575 PF08281 Sigma-70, region 4 AMK58_RS09580 PF01464 Transglycosylase SLT domain AMK58_RS09580 PF08238 Sel1 repeat AMK58_RS09600 PF01212 Beta-eliminating lyase AMK58_RS09610 PF00849 RNA pseudouridylate synthase AMK58_RS09610 PF01479 S4 domain AMK58_RS09615 PF00140 Sigma-70 factor, region 1 AMK58_RS09615 PF04542 Sigma-70 region 2 AMK58_RS09615 PF04545 Sigma-70, region 4 AMK58_RS09630 PF00709 Adenylosuccinate synthetase AMK58_RS09635 PF13393 Histidyl-tRNA synthetase AMK58_RS09645 PF02386 Cation transport protein AMK58_RS09655 PF13088 BNR repeat-like domain AMK58_RS09660 PF04055 Radical SAM superfamily AMK58_RS09660 PF13186 Iron-sulfur cluster-binding domain AMK58_RS09665 PF03631 AMK58_RS09665 AMK58_RS09670 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS09680 PF01264 Chorismate synthase AMK58_RS09690 PF00072 Response regulator receiver domain AMK58_RS09695 PF02627 Carboxymuconolactone decarboxylase family AMK58_RS09700 PF01343 Peptidase family S49 AMK58_RS09710 PF01339 CheB methylesterase AMK58_RS09710 PF01739 CheR methyltransferase, SAM binding domain AMK58_RS09710 PF03705 CheR methyltransferase, all-alpha domain AMK58_RS09710 PF13596 PAS domain AMK58_RS09715 PF00072 Response regulator receiver domain AMK58_RS09715 PF00989 PAS fold AMK58_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09715 PF13426 PAS domain AMK58_RS09725 PF03649 AMK58_RS09725 AMK58_RS09730 PF00005 ABC transporter AMK58_RS09735 PF07690 Major Facilitator Superfamily AMK58_RS09740 PF01594 AMK58_RS09740 AMK58_RS09745 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS09745 PF00672 HAMP domain AMK58_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09750 PF00072 Response regulator receiver domain AMK58_RS09750 PF00486 Transcriptional regulatory protein, C terminal AMK58_RS09755 PF13180 PDZ domain AMK58_RS09755 PF13365 Trypsin-like peptidase domain AMK58_RS09760 PF13432 Tetratricopeptide repeat AMK58_RS09765 PF00009 Elongation factor Tu GTP binding domain AMK58_RS09765 PF00679 Elongation factor G C-terminus AMK58_RS09765 PF03144 Elongation factor Tu domain 2 AMK58_RS09765 PF03764 Elongation factor G, domain IV AMK58_RS09765 PF14492 Elongation Factor G, domain II AMK58_RS09770 PF01042 Endoribonuclease L-PSP AMK58_RS09775 PF13365 Trypsin-like peptidase domain AMK58_RS09780 PF01131 DNA topoisomerase AMK58_RS09780 PF01751 Toprim domain AMK58_RS09800 PF13641 Glycosyltransferase like family 2 AMK58_RS09810 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS09820 PF00176 SNF2 family N-terminal domain AMK58_RS09820 PF00271 Helicase conserved C-terminal domain AMK58_RS09825 PF01569 PAP2 superfamily AMK58_RS09840 PF00583 Acetyltransferase (GNAT) family AMK58_RS09850 PF00140 Sigma-70 factor, region 1 AMK58_RS09850 PF03979 Sigma-70 factor, region 1 AMK58_RS09850 PF04539 Sigma-70 region 3 AMK58_RS09850 PF04542 Sigma-70 region 2 AMK58_RS09850 PF04545 Sigma-70, region 4 AMK58_RS09850 PF04546 Sigma-70, non-essential region AMK58_RS09855 PF01807 CHC2 zinc finger AMK58_RS09855 PF08275 DNA primase catalytic core, N-terminal domain AMK58_RS09855 PF13662 Toprim domain AMK58_RS09860 PF09424 Yqey-like protein AMK58_RS09865 PF00117 Glutamine amidotransferase class-I AMK58_RS09865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMK58_RS09870 PF00072 Response regulator receiver domain AMK58_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS09870 PF08448 PAS fold AMK58_RS09885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK58_RS09885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS09890 PF03960 ArsC family AMK58_RS09895 PF05175 Methyltransferase small domain AMK58_RS09900 PF00583 Acetyltransferase (GNAT) family AMK58_RS09910 PF01066 CDP-alcohol phosphatidyltransferase AMK58_RS09910 PF08009 AMK58_RS09910 AMK58_RS09915 PF02666 AMK58_RS09915 AMK58_RS09925 PF01476 LysM domain AMK58_RS09935 PF03641 Possible lysine decarboxylase AMK58_RS09940 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS09945 PF03447 Homoserine dehydrogenase, NAD binding domain AMK58_RS09950 PF06055 AMK58_RS09950 AMK58_RS09955 PF07750 AMK58_RS09955 AMK58_RS09960 PF13490 Putative zinc-finger AMK58_RS09965 PF04542 Sigma-70 region 2 AMK58_RS09965 PF08281 Sigma-70, region 4 AMK58_RS09970 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS09975 PF06146 AMK58_RS09975 AMK58_RS09980 PF03992 Antibiotic biosynthesis monooxygenase AMK58_RS09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS09990 PF00672 HAMP domain AMK58_RS09990 PF12729 AMK58_RS09990 AMK58_RS09995 PF05762 VWA domain containing CoxE-like protein AMK58_RS10000 PF13328 HD domain AMK58_RS10005 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMK58_RS10005 PF12801 AMK58_RS10005 AMK58_RS10005 PF13746 4Fe-4S dicluster domain AMK58_RS10020 PF00291 Pyridoxal-phosphate dependent enzyme AMK58_RS10025 PF07728 AAA domain (dynein-related subfamily) AMK58_RS10030 PF06127 AMK58_RS10030 AMK58_RS10035 PF01411 tRNA synthetases class II (A) AMK58_RS10035 PF02272 DHHA1 domain AMK58_RS10035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS10040 PF00154 recA bacterial DNA recombination protein AMK58_RS10045 PF12692 S-adenosyl-L-methionine methyltransferase AMK58_RS10050 PF00072 Response regulator receiver domain AMK58_RS10050 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS10050 PF00989 PAS fold AMK58_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS10050 PF08448 PAS fold AMK58_RS10055 PF01312 FlhB HrpN YscU SpaS Family AMK58_RS10060 PF01311 AMK58_RS10060 AMK58_RS10065 PF01313 AMK58_RS10065 AMK58_RS10070 PF02049 AMK58_RS10070 AMK58_RS10075 PF00460 Flagella basal body rod protein AMK58_RS10075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10080 PF00460 Flagella basal body rod protein AMK58_RS10085 PF01312 FlhB HrpN YscU SpaS Family AMK58_RS10095 PF04347 AMK58_RS10095 AMK58_RS10100 PF00813 AMK58_RS10100 AMK58_RS10105 PF02705 AMK58_RS10105 AMK58_RS10115 PF13677 AMK58_RS10115 AMK58_RS10125 PF04344 Chemotaxis phosphatase, CheZ AMK58_RS10130 PF10685 AMK58_RS10130 AMK58_RS10145 PF01052 Surface presentation of antigens (SPOA) AMK58_RS10145 PF02154 Flagellar motor switch protein FliM AMK58_RS10150 PF03748 AMK58_RS10150 AMK58_RS10155 PF00460 Flagella basal body rod protein AMK58_RS10155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10160 PF00460 Flagella basal body rod protein AMK58_RS10160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK58_RS10165 PF13144 SAF-like AMK58_RS10170 PF02107 AMK58_RS10170 AMK58_RS10175 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AMK58_RS10175 PF13432 Tetratricopeptide repeat AMK58_RS10180 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMK58_RS10185 PF10768 AMK58_RS10185 AMK58_RS10190 PF02119 AMK58_RS10190 AMK58_RS10195 PF10135 AMK58_RS10195 AMK58_RS10205 PF02120 Flagellar hook-length control protein FliK AMK58_RS10210 PF03963 AMK58_RS10210 AMK58_RS10210 PF13860 FlgD Ig-like domain AMK58_RS10215 PF06627 Protein of unknown function (DUF1153) AMK58_RS10220 PF01575 MaoC like domain AMK58_RS10235 PF10119 AMK58_RS10235 AMK58_RS10235 PF13649 Methyltransferase domain AMK58_RS10240 PF10002 AMK58_RS10240 AMK58_RS10245 PF00005 ABC transporter AMK58_RS10245 PF00664 ABC transporter transmembrane region AMK58_RS10250 PF01197 Ribosomal protein L31 AMK58_RS10255 PF07323 Protein of unknown function (DUF1465) AMK58_RS10260 PF00011 Hsp20/alpha crystallin family AMK58_RS10265 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS10265 PF00989 PAS fold AMK58_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS10265 PF08448 PAS fold AMK58_RS10270 PF00561 alpha/beta hydrolase fold AMK58_RS10275 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS10280 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMK58_RS10285 PF05013 N-formylglutamate amidohydrolase AMK58_RS10290 PF00892 EamA-like transporter family AMK58_RS10295 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS10295 PF07729 FCD domain AMK58_RS10300 PF00406 Adenylate kinase AMK58_RS10300 PF05191 Adenylate kinase, active site lid AMK58_RS10305 PF00344 SecY translocase AMK58_RS10310 PF00828 Ribosomal protein L18e/L15 AMK58_RS10315 PF00327 Ribosomal protein L30p/L7e AMK58_RS10320 PF00333 Ribosomal protein S5, N-terminal domain AMK58_RS10320 PF03719 Ribosomal protein S5, C-terminal domain AMK58_RS10325 PF00861 Ribosomal L18p/L5e family AMK58_RS10330 PF00347 Ribosomal protein L6 AMK58_RS10335 PF00410 Ribosomal protein S8 AMK58_RS10340 PF00253 Ribosomal protein S14p/S29e AMK58_RS10345 PF00281 Ribosomal protein L5 AMK58_RS10345 PF00673 ribosomal L5P family C-terminus AMK58_RS10350 PF00467 KOW motif AMK58_RS10350 PF17136 AMK58_RS10350 AMK58_RS10355 PF00238 Ribosomal protein L14p/L23e AMK58_RS10360 PF00366 Ribosomal protein S17 AMK58_RS10365 PF00831 Ribosomal L29 protein AMK58_RS10370 PF00252 Ribosomal protein L16p/L10e AMK58_RS10375 PF00189 Ribosomal protein S3, C-terminal domain AMK58_RS10375 PF07650 KH domain AMK58_RS10380 PF00237 Ribosomal protein L22p/L17e AMK58_RS10385 PF00203 Ribosomal protein S19 AMK58_RS10390 PF00181 Ribosomal Proteins L2, RNA binding domain AMK58_RS10390 PF03947 Ribosomal Proteins L2, C-terminal domain AMK58_RS10395 PF00276 Ribosomal protein L23 AMK58_RS10400 PF00573 Ribosomal protein L4/L1 family AMK58_RS10405 PF00297 Ribosomal protein L3 AMK58_RS10410 PF00338 Ribosomal protein S10p/S20e AMK58_RS10415 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10415 PF03143 Elongation factor Tu C-terminal domain AMK58_RS10415 PF03144 Elongation factor Tu domain 2 AMK58_RS10420 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10420 PF00679 Elongation factor G C-terminus AMK58_RS10420 PF03144 Elongation factor Tu domain 2 AMK58_RS10420 PF03764 Elongation factor G, domain IV AMK58_RS10420 PF14492 Elongation Factor G, domain II AMK58_RS10425 PF00177 Ribosomal protein S7p/S5e AMK58_RS10430 PF00164 Ribosomal protein S12/S23 AMK58_RS10435 PF01965 DJ-1/PfpI family AMK58_RS10440 PF00623 RNA polymerase Rpb1, domain 2 AMK58_RS10440 PF04983 RNA polymerase Rpb1, domain 3 AMK58_RS10440 PF04997 RNA polymerase Rpb1, domain 1 AMK58_RS10440 PF04998 RNA polymerase Rpb1, domain 5 AMK58_RS10440 PF05000 RNA polymerase Rpb1, domain 4 AMK58_RS10445 PF00562 RNA polymerase Rpb2, domain 6 AMK58_RS10445 PF04560 RNA polymerase Rpb2, domain 7 AMK58_RS10445 PF04561 RNA polymerase Rpb2, domain 2 AMK58_RS10445 PF04563 RNA polymerase beta subunit AMK58_RS10445 PF04565 RNA polymerase Rpb2, domain 3 AMK58_RS10445 PF10385 RNA polymerase beta subunit external 1 domain AMK58_RS10450 PF00542 Ribosomal protein L7/L12 C-terminal domain AMK58_RS10450 PF16320 AMK58_RS10450 AMK58_RS10455 PF00466 Ribosomal protein L10 AMK58_RS10460 PF00687 Ribosomal protein L1p/L10e family AMK58_RS10465 PF00298 Ribosomal protein L11, RNA binding domain AMK58_RS10465 PF03946 Ribosomal protein L11, N-terminal domain AMK58_RS10470 PF00467 KOW motif AMK58_RS10470 PF02357 Transcription termination factor nusG AMK58_RS10475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMK58_RS10485 PF00009 Elongation factor Tu GTP binding domain AMK58_RS10485 PF03143 Elongation factor Tu C-terminal domain AMK58_RS10485 PF03144 Elongation factor Tu domain 2 AMK58_RS10500 PF00588 SpoU rRNA Methylase family AMK58_RS10500 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS10520 PF02563 Polysaccharide biosynthesis/export protein AMK58_RS10520 PF10531 SLBB domain AMK58_RS10525 PF10082 AMK58_RS10525 AMK58_RS10530 PF01047 MarR family AMK58_RS10535 PF13458 Periplasmic binding protein AMK58_RS10540 PF02653 AMK58_RS10540 AMK58_RS10545 PF00005 ABC transporter AMK58_RS10545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS10550 PF00005 ABC transporter AMK58_RS10560 PF02358 Trehalose-phosphatase AMK58_RS10565 PF01979 Amidohydrolase family AMK58_RS10575 PF00480 ROK family AMK58_RS10580 PF12796 Ankyrin repeats (3 copies) AMK58_RS10585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS10585 PF00672 HAMP domain AMK58_RS10585 PF12729 AMK58_RS10585 AMK58_RS10590 PF01546 Peptidase family M20/M25/M40 AMK58_RS10590 PF07687 Peptidase dimerisation domain AMK58_RS10595 PF00005 ABC transporter AMK58_RS10600 PF00005 ABC transporter AMK58_RS10600 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS10605 PF02653 AMK58_RS10605 AMK58_RS10610 PF02653 AMK58_RS10610 AMK58_RS10615 PF13433 Periplasmic binding protein domain AMK58_RS10620 PF01261 Xylose isomerase-like TIM barrel AMK58_RS10625 PF06187 Protein of unknown function (DUF993) AMK58_RS10630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK58_RS10640 PF00005 ABC transporter AMK58_RS10645 PF09084 NMT1/THI5 like AMK58_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS10655 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS10655 PF14514 Transcriptional regulator, TetR, C-terminal AMK58_RS10660 PF00656 Caspase domain AMK58_RS10660 PF02493 MORN repeat AMK58_RS10660 PF08239 Bacterial SH3 domain AMK58_RS10665 PF00656 Caspase domain AMK58_RS10665 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS10665 PF08239 Bacterial SH3 domain AMK58_RS10670 PF11324 AMK58_RS10670 AMK58_RS10680 PF07883 Cupin domain AMK58_RS10685 PF00107 Zinc-binding dehydrogenase AMK58_RS10685 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS10685 PF00501 AMP-binding enzyme AMK58_RS10685 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS10685 PF16177 AMK58_RS10685 AMK58_RS10690 PF00005 ABC transporter AMK58_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS10700 PF09084 NMT1/THI5 like AMK58_RS10705 PF01471 Putative peptidoglycan binding domain AMK58_RS10710 PF00472 RF-1 domain AMK58_RS10710 PF03462 PCRF domain AMK58_RS10715 PF03062 AMK58_RS10715 AMK58_RS10725 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS10725 PF00912 Transglycosylase AMK58_RS10725 PF17092 AMK58_RS10725 AMK58_RS10730 PF01520 N-acetylmuramoyl-L-alanine amidase AMK58_RS10730 PF11741 AMIN domain AMK58_RS10735 PF00575 S1 RNA binding domain AMK58_RS10735 PF10150 Ribonuclease E/G family AMK58_RS10740 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK58_RS10740 PF03449 Transcription elongation factor, N-terminal AMK58_RS10745 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS10750 PF13462 Thioredoxin AMK58_RS10755 PF01435 Peptidase family M48 AMK58_RS10760 PF01019 Gamma-glutamyltranspeptidase AMK58_RS10765 PF00155 Aminotransferase class I and II AMK58_RS10770 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMK58_RS10775 PF04452 RNA methyltransferase AMK58_RS10780 PF01040 UbiA prenyltransferase family AMK58_RS10785 PF05257 CHAP domain AMK58_RS10790 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMK58_RS10795 PF13646 HEAT repeats AMK58_RS10800 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMK58_RS10805 PF12275 AMK58_RS10805 AMK58_RS10810 PF07681 AMK58_RS10810 AMK58_RS10815 PF01523 Putative modulator of DNA gyrase AMK58_RS10825 PF00781 Diacylglycerol kinase catalytic domain AMK58_RS10830 PF12850 Calcineurin-like phosphoesterase superfamily domain AMK58_RS10835 PF13439 Glycosyltransferase Family 4 AMK58_RS10835 PF13692 Glycosyl transferases group 1 AMK58_RS10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS10840 PF11563 Protoglobin AMK58_RS10845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMK58_RS10850 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMK58_RS10855 PF03279 AMK58_RS10855 AMK58_RS10860 PF01810 AMK58_RS10860 AMK58_RS10865 PF05071 AMK58_RS10865 AMK58_RS10870 PF02470 AMK58_RS10870 AMK58_RS10880 PF07411 Domain of unknown function (DUF1508) AMK58_RS10885 PF02515 CoA-transferase family III AMK58_RS10890 PF00805 Pentapeptide repeats (8 copies) AMK58_RS10895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK58_RS10900 PF04339 AMK58_RS10900 AMK58_RS10905 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AMK58_RS10910 PF00669 Bacterial flagellin N-terminal helical region AMK58_RS10915 PF00450 Serine carboxypeptidase AMK58_RS10920 PF01814 Hemerythrin HHE cation binding domain AMK58_RS10925 PF01709 Transcriptional regulator AMK58_RS10925 PF02867 Ribonucleotide reductase, barrel domain AMK58_RS10925 PF08471 AMK58_RS10925 AMK58_RS10930 PF05239 PRC-barrel domain AMK58_RS10935 PF01814 Hemerythrin HHE cation binding domain AMK58_RS10945 PF12146 Putative lysophospholipase AMK58_RS10950 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMK58_RS10955 PF00106 short chain dehydrogenase AMK58_RS10960 PF01575 MaoC like domain AMK58_RS10965 PF01687 Riboflavin kinase AMK58_RS10965 PF06574 FAD synthetase AMK58_RS10970 PF00156 Phosphoribosyl transferase domain AMK58_RS10975 PF00133 tRNA synthetases class I (I, L, M and V) AMK58_RS10975 PF06827 Zinc finger found in FPG and IleRS AMK58_RS10975 PF08264 Anticodon-binding domain of tRNA AMK58_RS10980 PF01252 AMK58_RS10980 AMK58_RS10985 PF11233 AMK58_RS10985 AMK58_RS10990 PF00675 Insulinase (Peptidase family M16) AMK58_RS10990 PF05193 Peptidase M16 inactive domain AMK58_RS10995 PF05193 Peptidase M16 inactive domain AMK58_RS11005 PF00342 Phosphoglucose isomerase AMK58_RS11025 PF01119 DNA mismatch repair protein, C-terminal domain AMK58_RS11025 PF08676 MutL C terminal dimerisation domain AMK58_RS11025 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS11040 PF13937 AMK58_RS11040 AMK58_RS11045 PF00474 Sodium:solute symporter family AMK58_RS11050 PF00027 Cyclic nucleotide-binding domain AMK58_RS11050 PF00571 CBS domain AMK58_RS11050 PF03445 AMK58_RS11050 AMK58_RS11050 PF10335 AMK58_RS11050 AMK58_RS11060 PF07969 Amidohydrolase family AMK58_RS11070 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS11070 PF07729 FCD domain AMK58_RS11075 PF00005 ABC transporter AMK58_RS11080 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS11085 PF09084 NMT1/THI5 like AMK58_RS11090 PF03781 Sulfatase-modifying factor enzyme 1 AMK58_RS11095 PF00884 Sulfatase AMK58_RS11100 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK58_RS11105 PF01979 Amidohydrolase family AMK58_RS11110 PF12697 Alpha/beta hydrolase family AMK58_RS11115 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK58_RS11120 PF00392 Bacterial regulatory proteins, gntR family AMK58_RS11120 PF07729 FCD domain AMK58_RS11125 PF00248 Aldo/keto reductase family AMK58_RS11130 PF03923 AMK58_RS11130 AMK58_RS11140 PF00535 Glycosyl transferase family 2 AMK58_RS11140 PF03279 AMK58_RS11140 AMK58_RS11145 PF01593 Flavin containing amine oxidoreductase AMK58_RS11150 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS11150 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS11155 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS11165 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK58_RS11165 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK58_RS11170 PF11659 AMK58_RS11170 AMK58_RS11185 PF13279 Thioesterase-like superfamily AMK58_RS11190 PF00501 AMP-binding enzyme AMK58_RS11200 PF00550 Phosphopantetheine attachment site AMK58_RS11205 PF00550 Phosphopantetheine attachment site AMK58_RS11210 PF01553 Acyltransferase AMK58_RS11215 PF13723 AMK58_RS11215 AMK58_RS11225 PF12146 Putative lysophospholipase AMK58_RS11235 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS11240 PF09827 CRISPR associated protein Cas2 AMK58_RS11245 PF01867 CRISPR associated protein Cas1 AMK58_RS11250 PF01930 Domain of unknown function DUF83 AMK58_RS11255 PF05107 AMK58_RS11255 AMK58_RS11260 PF09709 AMK58_RS11260 AMK58_RS11265 PF09704 CRISPR-associated protein (Cas_Cas5) AMK58_RS11270 PF00270 DEAD/DEAH box helicase AMK58_RS11275 PF00144 Beta-lactamase AMK58_RS11280 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK58_RS11285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMK58_RS11290 PF00128 Alpha amylase, catalytic domain AMK58_RS11290 PF16657 AMK58_RS11290 AMK58_RS11295 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMK58_RS11300 PF03602 Conserved hypothetical protein 95 AMK58_RS11305 PF00849 RNA pseudouridylate synthase AMK58_RS11305 PF01479 S4 domain AMK58_RS11310 PF07311 Dodecin AMK58_RS11315 PF14437 AMK58_RS11315 AMK58_RS11320 PF01909 Nucleotidyltransferase domain AMK58_RS11325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMK58_RS11325 PF02843 Phosphoribosylglycinamide synthetase, C domain AMK58_RS11325 PF02844 Phosphoribosylglycinamide synthetase, N domain AMK58_RS11330 PF02601 AMK58_RS11330 AMK58_RS11330 PF13742 AMK58_RS11330 AMK58_RS11335 PF00520 Ion transport protein AMK58_RS11340 PF01979 Amidohydrolase family AMK58_RS11345 PF03129 Anticodon binding domain AMK58_RS11345 PF13393 Histidyl-tRNA synthetase AMK58_RS11350 PF13432 Tetratricopeptide repeat AMK58_RS11355 PF00912 Transglycosylase AMK58_RS11365 PF00210 Ferritin-like domain AMK58_RS11385 PF00994 Probable molybdopterin binding domain AMK58_RS11390 PF03749 Sugar fermentation stimulation protein AMK58_RS11395 PF00557 Metallopeptidase family M24 AMK58_RS11400 PF04002 RadC-like JAB domain AMK58_RS11405 PF05099 Tellurite resistance protein TerB AMK58_RS11410 PF00563 EAL domain AMK58_RS11410 PF00990 GGDEF domain AMK58_RS11410 PF08269 Cache domain AMK58_RS11410 PF13188 PAS domain AMK58_RS11410 PF13426 PAS domain AMK58_RS11415 PF00206 Lyase AMK58_RS11415 PF10397 Adenylosuccinate lyase C-terminus AMK58_RS11420 PF07345 Domain of unknown function (DUF1476) AMK58_RS11425 PF05742 AMK58_RS11425 AMK58_RS11430 PF01259 SAICAR synthetase AMK58_RS11435 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMK58_RS11440 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK58_RS11445 PF03473 MOSC domain AMK58_RS11445 PF03475 3-alpha domain AMK58_RS11450 PF07690 Major Facilitator Superfamily AMK58_RS11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS11455 PF03466 LysR substrate binding domain AMK58_RS11460 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMK58_RS11465 PF00586 AIR synthase related protein, N-terminal domain AMK58_RS11465 PF02769 AIR synthase related protein, C-terminal domain AMK58_RS11470 PF01722 BolA-like protein AMK58_RS11475 PF00462 Glutaredoxin AMK58_RS11485 PF00892 EamA-like transporter family AMK58_RS11490 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS11495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMK58_RS11500 PF00163 Ribosomal protein S4/S9 N-terminal domain AMK58_RS11500 PF01479 S4 domain AMK58_RS11515 PF04397 LytTr DNA-binding domain AMK58_RS11515 PF08448 PAS fold AMK58_RS11520 PF00588 SpoU rRNA Methylase family AMK58_RS11525 PF00682 HMGL-like AMK58_RS11525 PF08502 LeuA allosteric (dimerisation) domain AMK58_RS11530 PF00072 Response regulator receiver domain AMK58_RS11535 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS11535 PF03924 CHASE domain AMK58_RS11545 PF01757 AMK58_RS11545 AMK58_RS11550 PF01406 tRNA synthetases class I (C) catalytic domain AMK58_RS11550 PF09190 DALR domain AMK58_RS11555 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK58_RS11560 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS11570 PF00795 Carbon-nitrogen hydrolase AMK58_RS11570 PF02540 NAD synthase AMK58_RS11575 PF00355 Rieske [2Fe-2S] domain AMK58_RS11575 PF01266 FAD dependent oxidoreductase AMK58_RS11585 PF13474 SnoaL-like domain AMK58_RS11590 PF00144 Beta-lactamase AMK58_RS11595 PF13231 AMK58_RS11595 AMK58_RS11600 PF00535 Glycosyl transferase family 2 AMK58_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS11605 PF00672 HAMP domain AMK58_RS11605 PF12729 AMK58_RS11605 AMK58_RS11610 PF04315 AMK58_RS11610 AMK58_RS11615 PF13458 Periplasmic binding protein AMK58_RS11620 PF02653 AMK58_RS11620 AMK58_RS11625 PF06508 Queuosine biosynthesis protein QueC AMK58_RS11640 PF02653 AMK58_RS11640 AMK58_RS11645 PF00005 ABC transporter AMK58_RS11645 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK58_RS11650 PF00005 ABC transporter AMK58_RS11655 PF07859 alpha/beta hydrolase fold AMK58_RS11665 PF00829 Ribosomal prokaryotic L21 protein AMK58_RS11670 PF01016 Ribosomal L27 protein AMK58_RS11675 PF01018 GTP1/OBG AMK58_RS11675 PF01926 50S ribosome-binding GTPase AMK58_RS11680 PF00696 Amino acid kinase family AMK58_RS11680 PF01472 PUA domain AMK58_RS11685 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS11700 PF01925 AMK58_RS11700 AMK58_RS11705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMK58_RS11710 PF00171 Aldehyde dehydrogenase family AMK58_RS11715 PF01467 Cytidylyltransferase AMK58_RS11720 PF02410 Oligomerisation domain AMK58_RS11725 PF02590 Predicted SPOUT methyltransferase AMK58_RS11730 PF01676 Metalloenzyme superfamily AMK58_RS11730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMK58_RS11735 PF01551 Peptidase family M23 AMK58_RS11740 PF03572 Peptidase family S41 AMK58_RS11740 PF13180 PDZ domain AMK58_RS11745 PF04748 Divergent polysaccharide deacetylase AMK58_RS11750 PF00293 NUDIX domain AMK58_RS11760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMK58_RS11765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS11765 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK58_RS11770 PF00231 ATP synthase AMK58_RS11775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK58_RS11775 PF00306 ATP synthase alpha/beta chain, C terminal domain AMK58_RS11775 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK58_RS11780 PF00213 ATP synthase delta (OSCP) subunit AMK58_RS11790 PF17200 AMK58_RS11790 AMK58_RS11795 PF00270 DEAD/DEAH box helicase AMK58_RS11795 PF00271 Helicase conserved C-terminal domain AMK58_RS11800 PF00923 Transaldolase AMK58_RS11805 PF04340 Protein of unknown function, DUF484 AMK58_RS11810 PF00589 Phage integrase family AMK58_RS11810 PF02899 Phage integrase, N-terminal SAM-like domain AMK58_RS11815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK58_RS11815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK58_RS11825 PF00561 alpha/beta hydrolase fold AMK58_RS11830 PF08085 AMK58_RS11830 AMK58_RS11835 PF00294 pfkB family carbohydrate kinase AMK58_RS11835 PF01467 Cytidylyltransferase AMK58_RS11845 PF00672 HAMP domain AMK58_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS11855 PF13649 Methyltransferase domain AMK58_RS11865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS11870 PF01928 CYTH domain AMK58_RS11870 PF05235 CHAD domain AMK58_RS11875 PF13649 Methyltransferase domain AMK58_RS11880 PF00162 Phosphoglycerate kinase AMK58_RS11885 PF02132 RecR protein AMK58_RS11885 PF13662 Toprim domain AMK58_RS11890 PF02575 YbaB/EbfC DNA-binding family AMK58_RS11895 PF12169 DNA polymerase III subunits gamma and tau domain III AMK58_RS11895 PF12362 AMK58_RS11895 AMK58_RS11895 PF13177 DNA polymerase III, delta subunit AMK58_RS11905 PF00034 Cytochrome c AMK58_RS11910 PF02348 Cytidylyltransferase AMK58_RS11915 PF00800 Prephenate dehydratase AMK58_RS11920 PF00293 NUDIX domain AMK58_RS11920 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMK58_RS11920 PF09297 NADH pyrophosphatase zinc ribbon domain AMK58_RS11925 PF00459 Inositol monophosphatase family AMK58_RS11935 PF00230 Major intrinsic protein AMK58_RS11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS11950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS11955 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS11965 PF00005 ABC transporter AMK58_RS11965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS11970 PF06170 AMK58_RS11970 AMK58_RS11975 PF00849 RNA pseudouridylate synthase AMK58_RS11980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK58_RS11985 PF01047 MarR family AMK58_RS11990 PF10387 Protein of unknown function (DUF2442) AMK58_RS11995 PF13711 AMK58_RS11995 AMK58_RS12000 PF01706 FliG C-terminal domain AMK58_RS12000 PF14841 FliG middle domain AMK58_RS12000 PF14842 FliG N-terminal domain AMK58_RS12005 PF00883 Cytosol aminopeptidase family, catalytic domain AMK58_RS12010 PF13417 Glutathione S-transferase, N-terminal domain AMK58_RS12015 PF16868 AMK58_RS12015 AMK58_RS12020 PF04955 AMK58_RS12020 AMK58_RS12030 PF00817 impB/mucB/samB family AMK58_RS12035 PF02811 PHP domain AMK58_RS12035 PF07733 Bacterial DNA polymerase III alpha subunit AMK58_RS12035 PF14579 Helix-hairpin-helix motif AMK58_RS12045 PF03942 AMK58_RS12045 AMK58_RS12055 PF04280 Tim44-like domain AMK58_RS12060 PF13430 AMK58_RS12060 AMK58_RS12065 PF04055 Radical SAM superfamily AMK58_RS12070 PF00043 Glutathione S-transferase, C-terminal domain AMK58_RS12070 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS12075 PF14343 AMK58_RS12075 AMK58_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12080 PF12911 AMK58_RS12080 AMK58_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS12095 PF00378 Enoyl-CoA hydratase/isomerase family AMK58_RS12100 PF07690 Major Facilitator Superfamily AMK58_RS12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK58_RS12110 PF03466 LysR substrate binding domain AMK58_RS12120 PF00582 Universal stress protein family AMK58_RS12125 PF00563 EAL domain AMK58_RS12125 PF00990 GGDEF domain AMK58_RS12125 PF08448 PAS fold AMK58_RS12130 PF02798 Glutathione S-transferase, N-terminal domain AMK58_RS12130 PF14497 Glutathione S-transferase, C-terminal domain AMK58_RS12135 PF00202 Aminotransferase class-III AMK58_RS12145 PF00155 Aminotransferase class I and II AMK58_RS12150 PF14557 Putative AphA-like transcriptional regulator AMK58_RS12155 PF01627 Hpt domain AMK58_RS12160 PF13561 Enoyl-(Acyl carrier protein) reductase AMK58_RS12165 PF04187 Protein of unknown function, DUF399 AMK58_RS12165 PF13180 PDZ domain AMK58_RS12170 PF00293 NUDIX domain AMK58_RS12170 PF14803 Nudix N-terminal AMK58_RS12175 PF02646 AMK58_RS12175 AMK58_RS12180 PF00313 'Cold-shock' DNA-binding domain AMK58_RS12190 PF01327 Polypeptide deformylase AMK58_RS12195 PF00551 Formyl transferase AMK58_RS12195 PF02911 Formyl transferase, C-terminal domain AMK58_RS12200 PF01416 tRNA pseudouridine synthase AMK58_RS12205 PF02653 AMK58_RS12205 AMK58_RS12210 PF01878 EVE domain AMK58_RS12215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK58_RS12220 PF08279 HTH domain AMK58_RS12220 PF13280 AMK58_RS12220 AMK58_RS12225 PF00330 Aconitase family (aconitate hydratase) AMK58_RS12235 PF00892 EamA-like transporter family AMK58_RS12240 PF01245 Ribosomal protein L19 AMK58_RS12245 PF01746 tRNA (Guanine-1)-methyltransferase AMK58_RS12250 PF01782 RimM N-terminal domain AMK58_RS12250 PF05239 PRC-barrel domain AMK58_RS12255 PF00886 Ribosomal protein S16 AMK58_RS12260 PF00448 SRP54-type protein, GTPase domain AMK58_RS12260 PF02881 SRP54-type protein, helical bundle domain AMK58_RS12260 PF02978 Signal peptide binding domain AMK58_RS12265 PF00805 Pentapeptide repeats (8 copies) AMK58_RS12280 PF10098 AMK58_RS12280 AMK58_RS12285 PF00990 GGDEF domain AMK58_RS12290 PF13419 Haloacid dehalogenase-like hydrolase AMK58_RS12295 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS12295 PF14602 Hexapeptide repeat of succinyl-transferase AMK58_RS12295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMK58_RS12300 PF01546 Peptidase family M20/M25/M40 AMK58_RS12300 PF07687 Peptidase dimerisation domain AMK58_RS12310 PF02277 Phosphoribosyltransferase AMK58_RS12315 PF02654 AMK58_RS12315 AMK58_RS12320 PF00300 Histidine phosphatase superfamily (branch 1) AMK58_RS12325 PF16242 AMK58_RS12325 AMK58_RS12330 PF00132 Bacterial transferase hexapeptide (six repeats) AMK58_RS12330 PF14602 Hexapeptide repeat of succinyl-transferase AMK58_RS12335 PF01061 AMK58_RS12335 AMK58_RS12340 PF00005 ABC transporter AMK58_RS12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12350 PF00072 Response regulator receiver domain AMK58_RS12350 PF02954 Bacterial regulatory protein, Fis family AMK58_RS12355 PF11127 Protein of unknown function (DUF2892) AMK58_RS12360 PF00027 Cyclic nucleotide-binding domain AMK58_RS12360 PF13545 Crp-like helix-turn-helix domain AMK58_RS12365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS12365 PF02706 Chain length determinant protein AMK58_RS12365 PF13807 AMK58_RS12365 AMK58_RS12370 PF01943 AMK58_RS12370 AMK58_RS12370 PF14667 Polysaccharide biosynthesis C-terminal domain AMK58_RS12375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMK58_RS12375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMK58_RS12375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMK58_RS12380 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS12385 PF01370 NAD dependent epimerase/dehydratase family AMK58_RS12390 PF13579 Glycosyl transferase 4-like domain AMK58_RS12390 PF13692 Glycosyl transferases group 1 AMK58_RS12395 PF00534 Glycosyl transferases group 1 AMK58_RS12400 PF13692 Glycosyl transferases group 1 AMK58_RS12405 PF03232 AMK58_RS12405 AMK58_RS12410 PF13229 Right handed beta helix region AMK58_RS12420 PF16822 AMK58_RS12420 AMK58_RS12425 PF00535 Glycosyl transferase family 2 AMK58_RS12430 PF00535 Glycosyl transferase family 2 AMK58_RS12440 PF00468 Ribosomal protein L34 AMK58_RS12445 PF00825 Ribonuclease P AMK58_RS12450 PF02096 60Kd inner membrane protein AMK58_RS12450 PF14849 YidC periplasmic domain AMK58_RS12455 PF01926 50S ribosome-binding GTPase AMK58_RS12460 PF00999 Sodium/hydrogen exchanger family AMK58_RS12470 PF00696 Amino acid kinase family AMK58_RS12480 PF01544 CorA-like Mg2+ transporter protein AMK58_RS12490 PF01124 MAPEG family AMK58_RS12495 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMK58_RS12500 PF00892 EamA-like transporter family AMK58_RS12505 PF01274 Malate synthase AMK58_RS12510 PF00589 Phage integrase family AMK58_RS12510 PF02899 Phage integrase, N-terminal SAM-like domain AMK58_RS12525 PF01202 Shikimate kinase AMK58_RS12530 PF01761 3-dehydroquinate synthase AMK58_RS12535 PF00571 CBS domain AMK58_RS12540 PF11136 AMK58_RS12540 AMK58_RS12545 PF13467 Ribbon-helix-helix domain AMK58_RS12550 PF01722 BolA-like protein AMK58_RS12555 PF00226 DnaJ domain AMK58_RS12560 PF07728 AAA domain (dynein-related subfamily) AMK58_RS12560 PF12556 AMK58_RS12560 AMK58_RS12565 PF13366 AMK58_RS12565 AMK58_RS12570 PF06213 AMK58_RS12570 AMK58_RS12570 PF11775 AMK58_RS12570 AMK58_RS12575 PF06776 Invasion associated locus B (IalB) protein AMK58_RS12580 PF13343 Bacterial extracellular solute-binding protein AMK58_RS12585 PF02678 Pirin AMK58_RS12585 PF05726 Pirin C-terminal cupin domain AMK58_RS12590 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS12595 PF14681 Uracil phosphoribosyltransferase AMK58_RS12600 PF00990 GGDEF domain AMK58_RS12605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMK58_RS12610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMK58_RS12620 PF01266 FAD dependent oxidoreductase AMK58_RS12625 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMK58_RS12630 PF06305 AMK58_RS12630 AMK58_RS12635 PF00216 Bacterial DNA-binding protein AMK58_RS12640 PF09955 AMK58_RS12640 AMK58_RS12645 PF00575 S1 RNA binding domain AMK58_RS12650 PF02224 Cytidylate kinase AMK58_RS12655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK58_RS12660 PF01019 Gamma-glutamyltranspeptidase AMK58_RS12665 PF09538 AMK58_RS12665 AMK58_RS12680 PF02678 Pirin AMK58_RS12680 PF05726 Pirin C-terminal cupin domain AMK58_RS12685 PF00994 Probable molybdopterin binding domain AMK58_RS12685 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS12685 PF03454 MoeA C-terminal region (domain IV) AMK58_RS12685 PF12727 PBP superfamily domain AMK58_RS12690 PF00994 Probable molybdopterin binding domain AMK58_RS12690 PF03453 MoeA N-terminal region (domain I and II) AMK58_RS12695 PF00072 Response regulator receiver domain AMK58_RS12695 PF00990 GGDEF domain AMK58_RS12700 PF00072 Response regulator receiver domain AMK58_RS12700 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS12700 PF00989 PAS fold AMK58_RS12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12705 PF00072 Response regulator receiver domain AMK58_RS12705 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12705 PF07694 5TMR of 5TMR-LYT AMK58_RS12705 PF08447 PAS fold AMK58_RS12715 PF00535 Glycosyl transferase family 2 AMK58_RS12720 PF04138 AMK58_RS12720 AMK58_RS12725 PF00011 Hsp20/alpha crystallin family AMK58_RS12730 PF06620 AMK58_RS12730 AMK58_RS12740 PF09912 AMK58_RS12740 AMK58_RS12745 PF04397 LytTr DNA-binding domain AMK58_RS12750 PF01757 AMK58_RS12750 AMK58_RS12755 PF00330 Aconitase family (aconitate hydratase) AMK58_RS12755 PF00694 Aconitase C-terminal domain AMK58_RS12760 PF13458 Periplasmic binding protein AMK58_RS12765 PF13489 Methyltransferase domain AMK58_RS12770 PF00293 NUDIX domain AMK58_RS12775 PF00929 Exonuclease AMK58_RS12780 PF01008 Initiation factor 2 subunit family AMK58_RS12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS12785 PF02743 Cache domain AMK58_RS12785 PF07568 AMK58_RS12785 AMK58_RS12795 PF00027 Cyclic nucleotide-binding domain AMK58_RS12795 PF00571 CBS domain AMK58_RS12795 PF03445 AMK58_RS12795 AMK58_RS12795 PF10335 AMK58_RS12795 AMK58_RS12800 PF00474 Sodium:solute symporter family AMK58_RS12805 PF04341 AMK58_RS12805 AMK58_RS12810 PF06676 AMK58_RS12810 AMK58_RS12815 PF13489 Methyltransferase domain AMK58_RS12820 PF02659 AMK58_RS12820 AMK58_RS12825 PF00795 Carbon-nitrogen hydrolase AMK58_RS12830 PF00462 Glutaredoxin AMK58_RS12835 PF00156 Phosphoribosyl transferase domain AMK58_RS12840 PF01313 AMK58_RS12840 AMK58_RS12845 PF13489 Methyltransferase domain AMK58_RS12850 PF13386 AMK58_RS12850 AMK58_RS12860 PF12796 Ankyrin repeats (3 copies) AMK58_RS12860 PF13606 Ankyrin repeat AMK58_RS12865 PF03186 AMK58_RS12865 AMK58_RS12870 PF00270 DEAD/DEAH box helicase AMK58_RS12870 PF00271 Helicase conserved C-terminal domain AMK58_RS12875 PF01741 Large-conductance mechanosensitive channel, MscL AMK58_RS12880 PF01043 SecA preprotein cross-linking domain AMK58_RS12880 PF02810 SEC-C motif AMK58_RS12880 PF07516 SecA Wing and Scaffold domain AMK58_RS12880 PF07517 SecA DEAD-like domain AMK58_RS12885 PF13616 PPIC-type PPIASE domain AMK58_RS12890 PF01960 ArgJ family AMK58_RS12895 PF13302 Acetyltransferase (GNAT) domain AMK58_RS12900 PF00293 NUDIX domain AMK58_RS12905 PF00270 DEAD/DEAH box helicase AMK58_RS12905 PF00271 Helicase conserved C-terminal domain AMK58_RS12905 PF00570 HRDC domain AMK58_RS12905 PF09382 RQC domain AMK58_RS12905 PF16124 AMK58_RS12905 AMK58_RS12915 PF13692 Glycosyl transferases group 1 AMK58_RS12925 PF00892 EamA-like transporter family AMK58_RS12930 PF06808 AMK58_RS12930 AMK58_RS12935 PF04290 AMK58_RS12935 AMK58_RS12940 PF03480 Bacterial extracellular solute-binding protein, family 7 AMK58_RS12945 PF00691 OmpA family AMK58_RS12950 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AMK58_RS12955 PF06761 AMK58_RS12955 AMK58_RS12955 PF14331 AMK58_RS12955 AMK58_RS12960 PF00691 OmpA family AMK58_RS12960 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AMK58_RS12965 PF01740 STAS domain AMK58_RS12970 PF00296 Luciferase-like monooxygenase AMK58_RS12975 PF01641 SelR domain AMK58_RS12980 PF01738 Dienelactone hydrolase family AMK58_RS12985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK58_RS12985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK58_RS12985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK58_RS12985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK58_RS12990 PF00313 'Cold-shock' DNA-binding domain AMK58_RS13005 PF14907 Uncharacterised nucleotidyltransferase AMK58_RS13010 PF00149 Calcineurin-like phosphoesterase AMK58_RS13015 PF00892 EamA-like transporter family AMK58_RS13020 PF12802 MarR family AMK58_RS13025 PF00005 ABC transporter AMK58_RS13030 PF00005 ABC transporter AMK58_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13035 PF12911 AMK58_RS13035 AMK58_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS13055 PF13181 Tetratricopeptide repeat AMK58_RS13055 PF13432 Tetratricopeptide repeat AMK58_RS13065 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMK58_RS13070 PF01935 Domain of unknown function DUF87 AMK58_RS13075 PF00563 EAL domain AMK58_RS13075 PF00990 GGDEF domain AMK58_RS13105 PF01569 PAP2 superfamily AMK58_RS13110 PF04214 AMK58_RS13110 AMK58_RS13115 PF00072 Response regulator receiver domain AMK58_RS13115 PF00990 GGDEF domain AMK58_RS13115 PF11849 AMK58_RS13115 AMK58_RS13130 PF04024 AMK58_RS13130 AMK58_RS13135 PF06667 AMK58_RS13135 AMK58_RS13140 PF04012 AMK58_RS13140 AMK58_RS13145 PF00158 Sigma-54 interaction domain AMK58_RS13145 PF02954 Bacterial regulatory protein, Fis family AMK58_RS13150 PF09650 AMK58_RS13150 AMK58_RS13155 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS13155 PF00912 Transglycosylase AMK58_RS13160 PF03486 HI0933-like protein AMK58_RS13170 PF03264 NapC/NirT cytochrome c family, N-terminal region AMK58_RS13175 PF00034 Cytochrome c AMK58_RS13175 PF03150 Di-haem cytochrome c peroxidase AMK58_RS13180 PF00199 Catalase AMK58_RS13180 PF06628 Catalase-related immune-responsive AMK58_RS13185 PF00118 TCP-1/cpn60 chaperonin family AMK58_RS13190 PF00166 Chaperonin 10 Kd subunit AMK58_RS13195 PF06233 AMK58_RS13195 AMK58_RS13200 PF00959 Phage lysozyme AMK58_RS13210 PF02628 AMK58_RS13210 AMK58_RS13215 PF06850 AMK58_RS13215 AMK58_RS13220 PF03372 Endonuclease/Exonuclease/phosphatase family AMK58_RS13225 PF00614 Phospholipase D Active site motif AMK58_RS13225 PF09335 AMK58_RS13225 AMK58_RS13225 PF13091 PLD-like domain AMK58_RS13230 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13235 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13240 PF00005 ABC transporter AMK58_RS13240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS13245 PF00924 Mechanosensitive ion channel AMK58_RS13250 PF00072 Response regulator receiver domain AMK58_RS13250 PF01966 HD domain AMK58_RS13250 PF11849 AMK58_RS13250 AMK58_RS13255 PF00156 Phosphoribosyl transferase domain AMK58_RS13260 PF00332 Glycosyl hydrolases family 17 AMK58_RS13265 PF00175 Oxidoreductase NAD-binding domain AMK58_RS13265 PF00970 Oxidoreductase FAD-binding domain AMK58_RS13270 PF06114 Domain of unknown function (DUF955) AMK58_RS13270 PF09856 AMK58_RS13270 AMK58_RS13270 PF12844 Helix-turn-helix domain AMK58_RS13275 PF00463 Isocitrate lyase family AMK58_RS13280 PF01965 DJ-1/PfpI family AMK58_RS13285 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS13285 PF08448 PAS fold AMK58_RS13285 PF12860 AMK58_RS13285 AMK58_RS13290 PF00174 Oxidoreductase molybdopterin binding domain AMK58_RS13295 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMK58_RS13295 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMK58_RS13300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK58_RS13305 PF02915 Rubrerythrin AMK58_RS13310 PF06945 AMK58_RS13310 AMK58_RS13315 PF09537 Domain of unknown function (DUF2383) AMK58_RS13320 PF05974 Domain of unknown function (DUF892) AMK58_RS13325 PF10688 AMK58_RS13325 AMK58_RS13335 PF00156 Phosphoribosyl transferase domain AMK58_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS13350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS13355 PF02633 Creatinine amidohydrolase AMK58_RS13360 PF01078 Magnesium chelatase, subunit ChlI AMK58_RS13360 PF13541 Subunit ChlI of Mg-chelatase AMK58_RS13365 PF13560 Helix-turn-helix domain AMK58_RS13380 PF01527 Transposase AMK58_RS13385 PF05717 AMK58_RS13385 AMK58_RS13400 PF00589 Phage integrase family AMK58_RS13415 PF03050 AMK58_RS13415 AMK58_RS13415 PF13005 AMK58_RS13415 AMK58_RS13415 PF13007 AMK58_RS13415 AMK58_RS13415 PF13817 AMK58_RS13415 AMK58_RS13420 PF05717 AMK58_RS13420 AMK58_RS13425 PF00872 AMK58_RS13425 AMK58_RS13430 PF01710 Transposase AMK58_RS13440 PF13518 Helix-turn-helix domain AMK58_RS13445 PF01527 Transposase AMK58_RS13450 PF00665 Integrase core domain AMK58_RS13450 PF13551 Winged helix-turn helix AMK58_RS13455 PF01695 IstB-like ATP binding protein AMK58_RS13465 PF00665 Integrase core domain AMK58_RS13465 PF13384 Homeodomain-like domain AMK58_RS13470 PF01695 IstB-like ATP binding protein AMK58_RS13475 PF01695 IstB-like ATP binding protein AMK58_RS13500 PF01471 Putative peptidoglycan binding domain AMK58_RS13500 PF13539 D-alanyl-D-alanine carboxypeptidase AMK58_RS13515 PF00656 Caspase domain AMK58_RS13520 PF03050 AMK58_RS13520 AMK58_RS13525 PF03050 AMK58_RS13525 AMK58_RS13540 PF04055 Radical SAM superfamily AMK58_RS13540 PF13394 4Fe-4S single cluster domain AMK58_RS13560 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMK58_RS13560 PF06594 AMK58_RS13560 AMK58_RS13565 PF13340 AMK58_RS13565 AMK58_RS13580 PF00082 Subtilase family AMK58_RS13585 PF00004 ATPase family associated with various cellular activities (AAA) AMK58_RS13590 PF00775 Dioxygenase AMK58_RS13595 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AMK58_RS13605 PF03923 AMK58_RS13605 AMK58_RS13610 PF13036 Protein of unknown function (DUF3897) AMK58_RS13630 PF00892 EamA-like transporter family AMK58_RS13635 PF00196 Bacterial regulatory proteins, luxR family AMK58_RS13645 PF06527 AMK58_RS13645 AMK58_RS13650 PF05621 AMK58_RS13650 AMK58_RS13655 PF00665 Integrase core domain AMK58_RS13655 PF09299 Mu transposase, C-terminal AMK58_RS13660 PF08722 TnsA endonuclease N terminal AMK58_RS13675 PF13335 AMK58_RS13675 AMK58_RS13680 PF03729 AMK58_RS13680 AMK58_RS13685 PF03548 Outer membrane lipoprotein carrier protein LolA AMK58_RS13690 PF01580 FtsK/SpoIIIE family AMK58_RS13690 PF09397 Ftsk gamma domain AMK58_RS13690 PF13491 AMK58_RS13690 AMK58_RS13695 PF00155 Aminotransferase class I and II AMK58_RS13700 PF00543 Nitrogen regulatory protein P-II AMK58_RS13705 PF01494 FAD binding domain AMK58_RS13710 PF02834 LigT like Phosphoesterase AMK58_RS13715 PF00248 Aldo/keto reductase family AMK58_RS13720 PF08495 AMK58_RS13720 AMK58_RS13720 PF10442 AMK58_RS13720 AMK58_RS13725 PF13472 GDSL-like Lipase/Acylhydrolase family AMK58_RS13730 PF00005 ABC transporter AMK58_RS13735 PF02687 AMK58_RS13735 AMK58_RS13740 PF00990 GGDEF domain AMK58_RS13745 PF00226 DnaJ domain AMK58_RS13745 PF00684 DnaJ central domain AMK58_RS13745 PF01556 DnaJ C terminal domain AMK58_RS13750 PF00012 Hsp70 protein AMK58_RS13765 PF08902 AMK58_RS13765 AMK58_RS13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS13770 PF08447 PAS fold AMK58_RS13770 PF13188 PAS domain AMK58_RS13775 PF00072 Response regulator receiver domain AMK58_RS13780 PF01025 GrpE AMK58_RS13785 PF01628 HrcA protein C terminal domain AMK58_RS13790 PF01138 3' exoribonuclease family, domain 1 AMK58_RS13790 PF03725 3' exoribonuclease family, domain 2 AMK58_RS13795 PF01725 Ham1 family AMK58_RS13800 PF04055 Radical SAM superfamily AMK58_RS13800 PF06969 HemN C-terminal domain AMK58_RS13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS13805 PF00672 HAMP domain AMK58_RS13805 PF17200 AMK58_RS13805 AMK58_RS13810 PF00186 Dihydrofolate reductase AMK58_RS13820 PF01381 Helix-turn-helix AMK58_RS13825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMK58_RS13825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMK58_RS13830 PF13369 AMK58_RS13830 AMK58_RS13830 PF13371 Tetratricopeptide repeat AMK58_RS13835 PF02021 Uncharacterised protein family UPF0102 AMK58_RS13840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK58_RS13845 PF13458 Periplasmic binding protein AMK58_RS13850 PF09361 AMK58_RS13850 AMK58_RS13855 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK58_RS13860 PF13466 STAS domain AMK58_RS13870 PF00488 MutS domain V AMK58_RS13870 PF01624 MutS domain I AMK58_RS13870 PF05188 MutS domain II AMK58_RS13870 PF05190 MutS family domain IV AMK58_RS13870 PF05192 MutS domain III AMK58_RS13885 PF01909 Nucleotidyltransferase domain AMK58_RS13890 PF00072 Response regulator receiver domain AMK58_RS14395 PF01297 Periplasmic solute binding protein family AMK58_RS14420 PF00294 pfkB family carbohydrate kinase AMK58_RS14460 PF08712 Scaffold protein Nfu/NifU N terminal AMK58_RS14540 PF13607 Succinyl-CoA ligase like flavodoxin domain AMK58_RS14760 PF00005 ABC transporter AMK58_RS15300 PF00290 Tryptophan synthase alpha chain AMK58_RS15700 PF13426 PAS domain AMK58_RS15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS15915 PF03401 Tripartite tricarboxylate transporter family receptor AMK58_RS16040 PF00270 DEAD/DEAH box helicase AMK58_RS16075 PF08447 PAS fold AMK58_RS16090 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS16165 PF00929 Exonuclease AMK58_RS16165 PF13188 PAS domain AMK58_RS16175 PF05036 Sporulation related domain AMK58_RS16190 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMK58_RS16365 PF00893 Small Multidrug Resistance protein AMK58_RS16700 PF12236 Bacteriophage head to tail connecting protein AMK58_RS16715 PF00990 GGDEF domain AMK58_RS16715 PF08448 PAS fold AMK58_RS16775 PF00563 EAL domain AMK58_RS16805 PF00905 Penicillin binding protein transpeptidase domain AMK58_RS16805 PF00912 Transglycosylase AMK58_RS16885 PF13584 AMK58_RS16885 AMK58_RS16915 PF07726 ATPase family associated with various cellular activities (AAA) AMK58_RS17030 PF10139 AMK58_RS17030 AMK58_RS17060 PF13365 Trypsin-like peptidase domain AMK58_RS17180 PF02308 AMK58_RS17180 AMK58_RS17390 PF00271 Helicase conserved C-terminal domain AMK58_RS17410 PF00072 Response regulator receiver domain AMK58_RS17410 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS17645 PF16841 AMK58_RS17645 AMK58_RS17705 PF01820 D-ala D-ala ligase N-terminus AMK58_RS17815 PF05175 Methyltransferase small domain AMK58_RS17850 PF00682 HMGL-like AMK58_RS17885 PF00128 Alpha amylase, catalytic domain AMK58_RS17895 PF12439 AMK58_RS17895 AMK58_RS18130 PF00430 ATP synthase B/B' CF(0) AMK58_RS18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS18205 PF07883 Cupin domain AMK58_RS18210 PF00266 Aminotransferase class-V AMK58_RS18370 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS18405 PF00148 Nitrogenase component 1 type Oxidoreductase AMK58_RS18465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK58_RS18530 PF01565 FAD binding domain AMK58_RS18530 PF02913 FAD linked oxidases, C-terminal domain AMK58_RS18560 PF03710 Glutamate-ammonia ligase adenylyltransferase AMK58_RS18800 PF07484 Phage Tail Collar Domain AMK58_RS18900 PF00107 Zinc-binding dehydrogenase AMK58_RS18900 PF08240 Alcohol dehydrogenase GroES-like domain AMK58_RS19065 PF00072 Response regulator receiver domain AMK58_RS19170 PF00999 Sodium/hydrogen exchanger family AMK58_RS19305 PF00005 ABC transporter AMK58_RS19485 PF08447 PAS fold AMK58_RS19485 PF12860 AMK58_RS19485 AMK58_RS19485 PF13426 PAS domain AMK58_RS19530 PF00849 RNA pseudouridylate synthase AMK58_RS19645 PF12867 DinB superfamily AMK58_RS19895 PF00318 Ribosomal protein S2 AMK58_RS19925 PF00595 PDZ domain (Also known as DHR or GLGF) AMK58_RS19925 PF02163 Peptidase family M50 AMK58_RS20065 PF00425 chorismate binding enzyme AMK58_RS20135 PF01434 Peptidase family M41 AMK58_RS20160 PF00221 Aromatic amino acid lyase AMK58_RS20315 PF13454 FAD-NAD(P)-binding AMK58_RS20470 PF04851 Type III restriction enzyme, res subunit AMK58_RS20480 PF02384 N-6 DNA Methylase AMK58_RS20570 PF00205 Thiamine pyrophosphate enzyme, central domain AMK58_RS20570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK58_RS20585 PF08442 ATP-grasp domain AMK58_RS20810 PF00535 Glycosyl transferase family 2 AMK58_RS20815 PF06251 Capsule biosynthesis GfcC AMK58_RS20860 PF13180 PDZ domain AMK58_RS20860 PF13365 Trypsin-like peptidase domain AMK58_RS20965 PF02674 AMK58_RS20965 AMK58_RS20990 PF01168 Alanine racemase, N-terminal domain AMK58_RS21045 PF01464 Transglycosylase SLT domain AMK58_RS21195 PF16980 AMK58_RS21195 AMK58_RS21270 PF00892 EamA-like transporter family AMK58_RS21335 PF08264 Anticodon-binding domain of tRNA AMK58_RS21335 PF10458 Valyl tRNA synthetase tRNA binding arm AMK58_RS21405 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS22100 PF13426 PAS domain AMK58_RS22165 PF00294 pfkB family carbohydrate kinase AMK58_RS22345 PF01209 ubiE/COQ5 methyltransferase family AMK58_RS22400 PF00005 ABC transporter AMK58_RS22415 PF05425 AMK58_RS22415 AMK58_RS22565 PF00692 dUTPase AMK58_RS22580 PF00158 Sigma-54 interaction domain AMK58_RS22740 PF00909 Ammonium Transporter Family AMK58_RS22790 PF00672 HAMP domain AMK58_RS22790 PF12729 AMK58_RS22790 AMK58_RS22865 PF01544 CorA-like Mg2+ transporter protein AMK58_RS23305 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS23305 PF08448 PAS fold AMK58_RS23430 PF00501 AMP-binding enzyme AMK58_RS23515 PF05088 AMK58_RS23515 AMK58_RS23525 PF05088 AMK58_RS23525 AMK58_RS23670 PF00072 Response regulator receiver domain AMK58_RS23670 PF00512 His Kinase A (phospho-acceptor) domain AMK58_RS23670 PF00989 PAS fold AMK58_RS23735 PF00072 Response regulator receiver domain AMK58_RS23875 PF08442 ATP-grasp domain AMK58_RS23970 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS23970 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK58_RS24020 PF12236 Bacteriophage head to tail connecting protein AMK58_RS24240 PF01180 Dihydroorotate dehydrogenase AMK58_RS24635 PF01580 FtsK/SpoIIIE family AMK58_RS24895 PF13420 Acetyltransferase (GNAT) domain AMK58_RS25050 PF02675 S-adenosylmethionine decarboxylase AMK58_RS25070 PF00300 Histidine phosphatase superfamily (branch 1) AMK58_RS25125 PF00005 ABC transporter AMK58_RS25125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS25145 PF00528 Binding-protein-dependent transport system inner membrane component AMK58_RS25230 PF12100 AMK58_RS25230 AMK58_RS25305 PF03190 Protein of unknown function, DUF255 AMK58_RS25340 PF00117 Glutamine amidotransferase class-I AMK58_RS25350 PF00475 Imidazoleglycerol-phosphate dehydratase AMK58_RS25705 PF03109 AMK58_RS25705 AMK58_RS25790 PF00394 Multicopper oxidase AMK58_RS25790 PF07732 Multicopper oxidase AMK58_RS25925 PF00692 dUTPase AMK58_RS25930 PF02441 Flavoprotein AMK58_RS25930 PF04127 DNA / pantothenate metabolism flavoprotein AMK58_RS25950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK58_RS26030 PF00271 Helicase conserved C-terminal domain AMK58_RS26100 PF01588 Putative tRNA binding domain AMK58_RS26100 PF03483 B3/4 domain AMK58_RS26100 PF03484 tRNA synthetase B5 domain AMK58_RS26120 PF11849 AMK58_RS26120 AMK58_RS26175 PF00483 Nucleotidyl transferase AMK58_RS26245 PF00764 Arginosuccinate synthase AMK58_RS26305 PF03466 LysR substrate binding domain AMK58_RS26430 PF01636 Phosphotransferase enzyme family AMK58_RS26525 PF04379 Protein of unknown function (DUF525) AMK58_RS26875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK58_RS26915 PF07219 AMK58_RS26915 AMK58_RS26915 PF14559 Tetratricopeptide repeat AMK58_RS26965 PF00501 AMP-binding enzyme AMK58_RS26970 PF00501 AMP-binding enzyme AMK58_RS26970 PF13193 AMP-binding enzyme C-terminal domain AMK58_RS27025 PF05088 AMK58_RS27025 AMK58_RS27045 PF03401 Tripartite tricarboxylate transporter family receptor AMK58_RS27200 PF00072 Response regulator receiver domain AMK58_RS27200 PF00989 PAS fold AMK58_RS27225 PF07228 Stage II sporulation protein E (SpoIIE) AMK58_RS27395 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK58_RS27505 PF00672 HAMP domain AMK58_RS27505 PF12729 AMK58_RS27505 AMK58_RS27520 PF04204 Homoserine O-succinyltransferase AMK58_RS27675 PF14461 Prokaryotic E2 family B AMK58_RS27720 PF13175 AAA ATPase domain AMK58_RS27800 PF13701 AMK58_RS27800 AMK58_RS27870 PF05192 MutS domain III AMK58_RS27960 PF00440 Bacterial regulatory proteins, tetR family AMK58_RS28065 PF00005 ABC transporter AMK58_RS28065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK58_RS28135 PF13609 Gram-negative porin AMK58_RS28245 PF03562 MltA specific insert domain AMK58_RS28245 PF06725 3D domain AMK58_RS28290 PF00005 ABC transporter AMK58_RS28370 PF01925 AMK58_RS28370 AMK58_RS28400 PF08712 Scaffold protein Nfu/NifU N terminal AMK58_RS28490 PF04760 Translation initiation factor IF-2, N-terminal region AMK58_RS28510 PF01138 3' exoribonuclease family, domain 1 AMK58_RS28510 PF03725 3' exoribonuclease family, domain 2 AMK58_RS28510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMK58_RS28575 PF05685 Putative restriction endonuclease AMK58_RS28585 PF13549 ATP-grasp domain AMK58_RS28680 PF00394 Multicopper oxidase AMK58_RS28680 PF07732 Multicopper oxidase AMK58_RS28725 PF12801 AMK58_RS28725 AMK58_RS28725 PF13746 4Fe-4S dicluster domain AMK58_RS28755 PF13458 Periplasmic binding protein AMK58_RS28805 PF08335 GlnD PII-uridylyltransferase AMK58_RS28935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK58_RS29265 PF02390 Putative methyltransferase