AMK58_RS00055 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMK58_RS00055 SM00534 ATPase domain of DNA mismatch repair MUTS family AMK58_RS00070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMK58_RS00075 SM00014 Acid phosphatase homologues AMK58_RS00095 SM00387 Histidine kinase-like ATPases AMK58_RS00095 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS00095 SM00448 cheY-homologous receiver domain AMK58_RS00125 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS00145 SM00822 AMK58_RS00145 AMK58_RS00175 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS00190 SM00855 Phosphoglycerate mutase family AMK58_RS00200 SM00091 PAS domain AMK58_RS00200 SM00267 diguanylate cyclase AMK58_RS00220 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS00240 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00265 SM00849 Metallo-beta-lactamase superfamily AMK58_RS00285 SM00448 cheY-homologous receiver domain AMK58_RS00285 SM00862 Transcriptional regulatory protein, C terminal AMK58_RS00350 SM00470 ParB-like nuclease domain AMK58_RS00365 SM01228 AMK58_RS00365 AMK58_RS00395 SM00829 Enoylreductase AMK58_RS00400 SM00479 AMK58_RS00400 AMK58_RS00435 SM00966 SpoVT / AbrB like domain AMK58_RS00445 SM00831 Cation transporter/ATPase, N-terminus AMK58_RS00450 SM00357 Cold shock protein domain AMK58_RS00450 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00450 SM00959 Rho termination factor, N-terminal domain AMK58_RS00465 SM00978 AMK58_RS00465 AMK58_RS00470 SM00925 MltA specific insert domain AMK58_RS00525 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00525 SM01086 C-terminal, D2-small domain, of ClpB protein AMK58_RS00530 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00535 SM00091 PAS domain AMK58_RS00535 SM00387 Histidine kinase-like ATPases AMK58_RS00535 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS00540 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS00545 SM00463 Small MutS-related domain AMK58_RS00565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS00585 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00600 SM00342 helix_turn_helix, arabinose operon control protein AMK58_RS00610 SM00478 endonuclease III AMK58_RS00610 SM00525 AMK58_RS00610 AMK58_RS00650 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMK58_RS00655 SM00932 Scaffold protein Nfu/NifU N terminal AMK58_RS00695 SM00563 Phosphate acyltransferases AMK58_RS00700 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS00715 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS00715 SM01091 Transporter associated domain AMK58_RS00725 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS00750 SM00316 Ribosomal protein S1-like RNA-binding domain AMK58_RS00750 SM00322 K homology RNA-binding domain AMK58_RS00775 SM01387 AMK58_RS00775 AMK58_RS00780 SM00316 Ribosomal protein S1-like RNA-binding domain AMK58_RS00780 SM00322 K homology RNA-binding domain AMK58_RS00845 SM00881 CoA binding domain AMK58_RS00880 SM00028 Tetratricopeptide repeats AMK58_RS00885 SM00028 Tetratricopeptide repeats AMK58_RS00890 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMK58_RS00890 SM01232 AMK58_RS00890 AMK58_RS00910 SM00382 ATPases associated with a variety of cellular activities AMK58_RS00910 SM00760 Bacterial dnaA protein helix-turn-helix domain AMK58_RS00920 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01015 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS01015 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS01020 SM00919 Malic enzyme, NAD binding domain AMK58_RS01020 SM01274 AMK58_RS01020 AMK58_RS01025 SM00387 Histidine kinase-like ATPases AMK58_RS01025 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01045 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01055 SM00448 cheY-homologous receiver domain AMK58_RS01055 SM00862 Transcriptional regulatory protein, C terminal AMK58_RS01100 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01100 SM00448 cheY-homologous receiver domain AMK58_RS01105 SM00357 Cold shock protein domain AMK58_RS01110 SM00091 PAS domain AMK58_RS01110 SM00387 Histidine kinase-like ATPases AMK58_RS01110 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01110 SM00448 cheY-homologous receiver domain AMK58_RS01125 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01160 SM00460 Transglutaminase/protease-like homologues AMK58_RS01165 SM00387 Histidine kinase-like ATPases AMK58_RS01165 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01170 SM00387 Histidine kinase-like ATPases AMK58_RS01180 SM00490 helicase superfamily c-terminal domain AMK58_RS01185 SM00363 S4 RNA-binding domain AMK58_RS01195 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS01220 SM01058 CarD-like/TRCF domain AMK58_RS01230 SM00318 Staphylococcal nuclease homologues AMK58_RS01240 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMK58_RS01270 SM00873 B3/4 domain AMK58_RS01270 SM00874 tRNA synthetase B5 domain AMK58_RS01270 SM00896 Ferredoxin-fold anticodon binding domain AMK58_RS01275 SM00448 cheY-homologous receiver domain AMK58_RS01280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMK58_RS01300 SM00838 Elongation factor G C-terminus AMK58_RS01330 SM00342 helix_turn_helix, arabinose operon control protein AMK58_RS01330 SM00871 Bacterial transcription activator, effector binding domain AMK58_RS01380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS01380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS01390 SM00450 Rhodanese Homology Domain AMK58_RS01405 SM00028 Tetratricopeptide repeats AMK58_RS01450 SM00226 Low molecular weight phosphatase family AMK58_RS01460 SM00986 Uracil DNA glycosylase superfamily AMK58_RS01460 SM00987 UreE urease accessory protein, C-terminal domain AMK58_RS01490 SM01152 AMK58_RS01490 AMK58_RS01520 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS01520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMK58_RS01525 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01540 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01600 SM00448 cheY-homologous receiver domain AMK58_RS01600 SM00862 Transcriptional regulatory protein, C terminal AMK58_RS01605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS01605 SM00387 Histidine kinase-like ATPases AMK58_RS01605 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01615 SM00091 PAS domain AMK58_RS01615 SM00387 Histidine kinase-like ATPases AMK58_RS01615 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01620 SM00091 PAS domain AMK58_RS01620 SM00387 Histidine kinase-like ATPases AMK58_RS01620 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01620 SM00448 cheY-homologous receiver domain AMK58_RS01625 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS01670 SM00387 Histidine kinase-like ATPases AMK58_RS01670 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01690 SM00448 cheY-homologous receiver domain AMK58_RS01725 SM00645 Papain family cysteine protease AMK58_RS01730 SM00487 DEAD-like helicases superfamily AMK58_RS01730 SM00490 helicase superfamily c-terminal domain AMK58_RS01750 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01815 SM00220 Serine/Threonine protein kinases, catalytic domain AMK58_RS01880 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01880 SM00487 DEAD-like helicases superfamily AMK58_RS01880 SM00490 helicase superfamily c-terminal domain AMK58_RS01900 SM00382 ATPases associated with a variety of cellular activities AMK58_RS01910 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS01920 SM00091 PAS domain AMK58_RS01920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS01920 SM00387 Histidine kinase-like ATPases AMK58_RS01920 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS01920 SM00448 cheY-homologous receiver domain AMK58_RS01930 SM00387 Histidine kinase-like ATPases AMK58_RS01945 SM00387 Histidine kinase-like ATPases AMK58_RS01955 SM00155 Phospholipase D. Active site motifs. AMK58_RS01960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS01995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS02075 SM00318 Staphylococcal nuclease homologues AMK58_RS02110 SM00798 AICARFT/IMPCHase bienzyme AMK58_RS02110 SM00851 MGS-like domain AMK58_RS02135 SM00028 Tetratricopeptide repeats AMK58_RS02145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMK58_RS02155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS02155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS02190 SM00464 Found in ATP-dependent protease La (LON) AMK58_RS02245 SM00387 Histidine kinase-like ATPases AMK58_RS02245 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS02270 SM00382 ATPases associated with a variety of cellular activities AMK58_RS02295 SM00487 DEAD-like helicases superfamily AMK58_RS02295 SM00490 helicase superfamily c-terminal domain AMK58_RS02315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS02315 SM00091 PAS domain AMK58_RS02315 SM00387 Histidine kinase-like ATPases AMK58_RS02315 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS02315 SM00448 cheY-homologous receiver domain AMK58_RS02320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS02320 SM00091 PAS domain AMK58_RS02320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS02320 SM00387 Histidine kinase-like ATPases AMK58_RS02335 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS02335 SM00448 cheY-homologous receiver domain AMK58_RS02350 SM00670 Large family of predicted nucleotide-binding domains AMK58_RS02355 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS02355 SM00448 cheY-homologous receiver domain AMK58_RS02360 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS02360 SM00448 cheY-homologous receiver domain AMK58_RS02375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS02380 SM00448 cheY-homologous receiver domain AMK58_RS02390 SM00138 Methyltransferase, chemotaxis proteins AMK58_RS02395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS02395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS02395 SM01358 AMK58_RS02395 AMK58_RS02400 SM00260 Two component signalling adaptor domain AMK58_RS02405 SM00073 Histidine Phosphotransfer domain AMK58_RS02405 SM00260 Two component signalling adaptor domain AMK58_RS02405 SM00387 Histidine kinase-like ATPases AMK58_RS02405 SM01231 AMK58_RS02405 AMK58_RS02410 SM00448 cheY-homologous receiver domain AMK58_RS02420 SM00387 Histidine kinase-like ATPases AMK58_RS02420 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS02430 SM00091 PAS domain AMK58_RS02430 SM00479 AMK58_RS02430 AMK58_RS02435 SM00448 cheY-homologous receiver domain AMK58_RS02465 SM00382 ATPases associated with a variety of cellular activities AMK58_RS02465 SM00962 SRP54-type protein, GTPase domain AMK58_RS02465 SM00963 SRP54-type protein, helical bundle domain AMK58_RS02470 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS02505 SM01329 AMK58_RS02505 AMK58_RS02545 SM00267 diguanylate cyclase AMK58_RS02550 SM00091 PAS domain AMK58_RS02550 SM00387 Histidine kinase-like ATPases AMK58_RS02550 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS02560 SM00861 Transketolase, pyrimidine binding domain AMK58_RS02565 SM00881 CoA binding domain AMK58_RS02610 SM00491 AMK58_RS02610 AMK58_RS02615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS02615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS02620 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS02635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS02635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS02660 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS02735 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS02755 SM00477 DNA/RNA non-specific endonuclease AMK58_RS02755 SM00892 DNA/RNA non-specific endonuclease AMK58_RS02765 SM00344 helix_turn_helix ASNC type AMK58_RS02770 SM01236 AMK58_RS02770 AMK58_RS02820 SM00857 Resolvase, N terminal domain AMK58_RS02880 SM00479 AMK58_RS02880 AMK58_RS02885 SM00342 helix_turn_helix, arabinose operon control protein AMK58_RS02950 SM00052 Putative diguanylate phosphodiesterase AMK58_RS02950 SM00091 PAS domain AMK58_RS02950 SM00267 diguanylate cyclase AMK58_RS02950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS03020 SM00052 Putative diguanylate phosphodiesterase AMK58_RS03025 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS03085 SM00965 Secretin and TonB N terminus short domain AMK58_RS03120 SM00327 von Willebrand factor (vWF) type A domain AMK58_RS03205 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03210 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03235 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03245 SM00671 Sel1-like repeats. AMK58_RS03265 SM00327 von Willebrand factor (vWF) type A domain AMK58_RS03310 SM00838 Elongation factor G C-terminus AMK58_RS03310 SM00889 Elongation factor G, domain IV AMK58_RS03320 SM01049 AMK58_RS03320 AMK58_RS03355 SM00344 helix_turn_helix ASNC type AMK58_RS03370 SM00851 MGS-like domain AMK58_RS03370 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMK58_RS03395 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03395 SM00843 AMK58_RS03395 AMK58_RS03425 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS03430 SM00822 AMK58_RS03430 AMK58_RS03465 SM00897 FIST N domain AMK58_RS03465 SM01204 AMK58_RS03465 AMK58_RS03470 SM00091 PAS domain AMK58_RS03470 SM00387 Histidine kinase-like ATPases AMK58_RS03470 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS03470 SM00448 cheY-homologous receiver domain AMK58_RS03480 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03500 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS03510 SM00849 Metallo-beta-lactamase superfamily AMK58_RS03515 SM00564 beta-propeller repeat AMK58_RS03520 SM00421 helix_turn_helix, Lux Regulon AMK58_RS03520 SM00448 cheY-homologous receiver domain AMK58_RS03530 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03575 SM00507 HNH nucleases AMK58_RS03585 SM00091 PAS domain AMK58_RS03585 SM00387 Histidine kinase-like ATPases AMK58_RS03585 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS03585 SM00448 cheY-homologous receiver domain AMK58_RS03595 SM00448 cheY-homologous receiver domain AMK58_RS03600 SM00763 PrkA AAA domain AMK58_RS03615 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMK58_RS03625 SM00487 DEAD-like helicases superfamily AMK58_RS03625 SM00490 helicase superfamily c-terminal domain AMK58_RS03625 SM00847 Helicase associated domain (HA2) Add an annotation AMK58_RS03630 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03650 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS03650 SM00448 cheY-homologous receiver domain AMK58_RS03675 SM00244 prohibitin homologues AMK58_RS03710 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS03725 SM00448 cheY-homologous receiver domain AMK58_RS03735 SM00387 Histidine kinase-like ATPases AMK58_RS03735 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS03740 SM00387 Histidine kinase-like ATPases AMK58_RS03740 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS03740 SM00448 cheY-homologous receiver domain AMK58_RS03745 SM00387 Histidine kinase-like ATPases AMK58_RS03745 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS03745 SM01079 AMK58_RS03745 AMK58_RS03765 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS03795 SM00421 helix_turn_helix, Lux Regulon AMK58_RS03795 SM00448 cheY-homologous receiver domain AMK58_RS03800 SM00421 helix_turn_helix, Lux Regulon AMK58_RS03800 SM00448 cheY-homologous receiver domain AMK58_RS03815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS03835 SM00448 cheY-homologous receiver domain AMK58_RS03875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMK58_RS03875 SM00292 breast cancer carboxy-terminal domain AMK58_RS03875 SM00532 Ligase N family AMK58_RS03890 SM00864 Tubulin/FtsZ family, GTPase domain AMK58_RS03890 SM00865 Tubulin/FtsZ family, C-terminal domain AMK58_RS03895 SM00842 Cell division protein FtsA AMK58_RS03980 SM00644 AMK58_RS03980 AMK58_RS03990 SM00382 ATPases associated with a variety of cellular activities AMK58_RS03995 SM00271 DnaJ molecular chaperone homology domain AMK58_RS04030 SM00387 Histidine kinase-like ATPases AMK58_RS04030 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS04030 SM00448 cheY-homologous receiver domain AMK58_RS04095 SM00917 LeuA allosteric (dimerisation) domain AMK58_RS04125 SM00829 Enoylreductase AMK58_RS04135 SM00642 Alpha-amylase domain AMK58_RS04145 SM00091 PAS domain AMK58_RS04145 SM00387 Histidine kinase-like ATPases AMK58_RS04190 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS04195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04195 SM01358 AMK58_RS04195 AMK58_RS04215 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS04230 SM00878 Biotin carboxylase C-terminal domain AMK58_RS04255 SM00382 ATPases associated with a variety of cellular activities AMK58_RS04255 SM01086 C-terminal, D2-small domain, of ClpB protein AMK58_RS04330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS04355 SM00320 WD40 repeats AMK58_RS04360 SM01007 Class II Aldolase and Adducin N-terminal domain AMK58_RS04365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04365 SM00387 Histidine kinase-like ATPases AMK58_RS04365 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS04365 SM01358 AMK58_RS04365 AMK58_RS04410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04410 SM01049 AMK58_RS04410 AMK58_RS04445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04455 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMK58_RS04480 SM00986 Uracil DNA glycosylase superfamily AMK58_RS04480 SM00987 UreE urease accessory protein, C-terminal domain AMK58_RS04505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMK58_RS04520 SM00382 ATPases associated with a variety of cellular activities AMK58_RS04525 SM00357 Cold shock protein domain AMK58_RS04530 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS04530 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS04535 SM00073 Histidine Phosphotransfer domain AMK58_RS04535 SM00387 Histidine kinase-like ATPases AMK58_RS04535 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS04535 SM00448 cheY-homologous receiver domain AMK58_RS04540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS04560 SM00893 Electron transfer flavoprotein domain AMK58_RS04565 SM00893 Electron transfer flavoprotein domain AMK58_RS04640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS04640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS04755 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMK58_RS04755 SM00240 Forkhead associated domain AMK58_RS04765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMK58_RS04765 SM00382 ATPases associated with a variety of cellular activities AMK58_RS04780 SM00382 ATPases associated with a variety of cellular activities AMK58_RS04940 SM00028 Tetratricopeptide repeats AMK58_RS04950 SM00382 ATPases associated with a variety of cellular activities AMK58_RS04970 SM00822 AMK58_RS04970 AMK58_RS04990 SM00387 Histidine kinase-like ATPases AMK58_RS04990 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS04990 SM00448 cheY-homologous receiver domain AMK58_RS05000 SM00448 cheY-homologous receiver domain AMK58_RS05115 SM00052 Putative diguanylate phosphodiesterase AMK58_RS05125 SM01001 AIR carboxylase AMK58_RS05155 SM00028 Tetratricopeptide repeats AMK58_RS05165 SM00947 Carbonic anhydrase AMK58_RS05180 SM00829 Enoylreductase AMK58_RS05235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS05235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS05235 SM01358 AMK58_RS05235 AMK58_RS05280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS05280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS05335 SM00028 Tetratricopeptide repeats AMK58_RS05350 SM00448 cheY-homologous receiver domain AMK58_RS05355 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS05380 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS05380 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS05440 SM00028 Tetratricopeptide repeats AMK58_RS05465 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05480 SM00244 prohibitin homologues AMK58_RS05485 SM00244 prohibitin homologues AMK58_RS05495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS05565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS05585 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05610 SM01133 AMK58_RS05610 AMK58_RS05615 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMK58_RS05645 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05650 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05675 SM00642 Alpha-amylase domain AMK58_RS05685 SM00052 Putative diguanylate phosphodiesterase AMK58_RS05690 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS05700 SM00318 Staphylococcal nuclease homologues AMK58_RS05705 SM00448 cheY-homologous receiver domain AMK58_RS05725 SM00829 Enoylreductase AMK58_RS05775 SM00852 Probable molybdopterin binding domain AMK58_RS05795 SM00387 Histidine kinase-like ATPases AMK58_RS05815 SM00662 RNA polymerases D AMK58_RS05840 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05860 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS05860 SM00895 AMK58_RS05860 AMK58_RS05900 SM00382 ATPases associated with a variety of cellular activities AMK58_RS05940 SM00267 diguanylate cyclase AMK58_RS05940 SM00448 cheY-homologous receiver domain AMK58_RS05945 SM01400 AMK58_RS05945 AMK58_RS05950 SM00849 Metallo-beta-lactamase superfamily AMK58_RS05950 SM01027 Beta-Casp domain AMK58_RS05960 SM00052 Putative diguanylate phosphodiesterase AMK58_RS05960 SM00267 diguanylate cyclase AMK58_RS05960 SM01079 AMK58_RS05960 AMK58_RS05965 SM00822 AMK58_RS05965 AMK58_RS06000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS06050 SM01230 AMK58_RS06050 AMK58_RS06055 SM00938 Nitrogen regulatory protein P-II AMK58_RS06095 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06095 SM00994 ClpX C4-type zinc finger AMK58_RS06095 SM01086 C-terminal, D2-small domain, of ClpB protein AMK58_RS06100 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06100 SM00464 Found in ATP-dependent protease La (LON) AMK58_RS06105 SM00411 bacterial (prokaryotic) histone like domain AMK58_RS06145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK58_RS06150 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK58_RS06200 SM00849 Metallo-beta-lactamase superfamily AMK58_RS06240 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06260 SM00481 DNA polymerase alpha chain like domain AMK58_RS06300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS06310 SM00935 Outer membrane protein (OmpH-like) AMK58_RS06380 SM00852 Probable molybdopterin binding domain AMK58_RS06470 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS06495 SM01192 AMK58_RS06495 AMK58_RS06495 SM01193 AMK58_RS06495 AMK58_RS06510 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06535 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06545 SM00448 cheY-homologous receiver domain AMK58_RS06570 SM00450 Rhodanese Homology Domain AMK58_RS06605 SM00382 ATPases associated with a variety of cellular activities AMK58_RS06615 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS06625 SM00387 Histidine kinase-like ATPases AMK58_RS06625 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS06625 SM00448 cheY-homologous receiver domain AMK58_RS06630 SM00448 cheY-homologous receiver domain AMK58_RS06635 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS06635 SM00091 PAS domain AMK58_RS06635 SM00387 Histidine kinase-like ATPases AMK58_RS06635 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS06635 SM00448 cheY-homologous receiver domain AMK58_RS06640 SM00448 cheY-homologous receiver domain AMK58_RS06645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS06645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS06645 SM01049 AMK58_RS06645 AMK58_RS06675 SM00387 Histidine kinase-like ATPases AMK58_RS06675 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS06675 SM00448 cheY-homologous receiver domain AMK58_RS06710 SM00881 CoA binding domain AMK58_RS06735 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS06760 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS06805 SM00487 DEAD-like helicases superfamily AMK58_RS06890 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS06895 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS06895 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS06910 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS06915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS06915 SM00895 AMK58_RS06915 AMK58_RS06935 SM00881 CoA binding domain AMK58_RS06990 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS06990 SM00895 AMK58_RS06990 AMK58_RS07010 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS07025 SM00834 Putative regulatory protein AMK58_RS07030 SM00091 PAS domain AMK58_RS07030 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07050 SM00421 helix_turn_helix, Lux Regulon AMK58_RS07050 SM00448 cheY-homologous receiver domain AMK58_RS07055 SM00421 helix_turn_helix, Lux Regulon AMK58_RS07055 SM00448 cheY-homologous receiver domain AMK58_RS07060 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07065 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07095 SM00988 UreE urease accessory protein, N-terminal domain AMK58_RS07135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMK58_RS07165 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS07190 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS07215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS07225 SM01259 AMK58_RS07225 AMK58_RS07260 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07265 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07295 SM00421 helix_turn_helix, Lux Regulon AMK58_RS07295 SM00448 cheY-homologous receiver domain AMK58_RS07300 SM00387 Histidine kinase-like ATPases AMK58_RS07300 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS07335 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07355 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07365 SM01005 Alanine racemase, C-terminal domain AMK58_RS07400 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMK58_RS07405 SM00822 AMK58_RS07405 AMK58_RS07415 SM00825 Beta-ketoacyl synthase AMK58_RS07435 SM01130 AMK58_RS07435 AMK58_RS07450 SM00342 helix_turn_helix, arabinose operon control protein AMK58_RS07460 SM01004 Delta-aminolevulinic acid dehydratase AMK58_RS07470 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMK58_RS07480 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS07485 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07490 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07515 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMK58_RS07515 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMK58_RS07535 SM00852 Probable molybdopterin binding domain AMK58_RS07550 SM00327 von Willebrand factor (vWF) type A domain AMK58_RS07560 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMK58_RS07565 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK58_RS07660 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS07675 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07700 SM00450 Rhodanese Homology Domain AMK58_RS07705 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS07720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS07750 SM00450 Rhodanese Homology Domain AMK58_RS07770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS07770 SM01358 AMK58_RS07770 AMK58_RS07785 SM00936 Penicillin-binding protein 5, C-terminal domain AMK58_RS07810 SM00849 Metallo-beta-lactamase superfamily AMK58_RS07825 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS07825 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMK58_RS07850 SM00382 ATPases associated with a variety of cellular activities AMK58_RS07860 SM01230 AMK58_RS07860 AMK58_RS07900 SM00411 bacterial (prokaryotic) histone like domain AMK58_RS07920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS07960 SM00852 Probable molybdopterin binding domain AMK58_RS07975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMK58_RS07975 SM00465 GIY-YIG type nucleases (URI domain) AMK58_RS08030 SM00382 ATPases associated with a variety of cellular activities AMK58_RS08035 SM00564 beta-propeller repeat AMK58_RS08050 SM00421 helix_turn_helix, Lux Regulon AMK58_RS08050 SM00448 cheY-homologous receiver domain AMK58_RS08055 SM00421 helix_turn_helix, Lux Regulon AMK58_RS08060 SM00421 helix_turn_helix, Lux Regulon AMK58_RS08060 SM00448 cheY-homologous receiver domain AMK58_RS08065 SM00382 ATPases associated with a variety of cellular activities AMK58_RS08080 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS08085 SM00091 PAS domain AMK58_RS08085 SM00387 Histidine kinase-like ATPases AMK58_RS08085 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS08085 SM00448 cheY-homologous receiver domain AMK58_RS08090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS08100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS08100 SM00091 PAS domain AMK58_RS08100 SM00267 diguanylate cyclase AMK58_RS08150 SM00422 helix_turn_helix, mercury resistance AMK58_RS08175 SM00382 ATPases associated with a variety of cellular activities AMK58_RS08235 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS08250 SM00422 helix_turn_helix, mercury resistance AMK58_RS08255 SM00411 bacterial (prokaryotic) histone like domain AMK58_RS08455 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS08460 SM00448 cheY-homologous receiver domain AMK58_RS08465 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS08465 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS08500 SM00487 DEAD-like helicases superfamily AMK58_RS08500 SM00490 helicase superfamily c-terminal domain AMK58_RS08565 SM00487 DEAD-like helicases superfamily AMK58_RS08565 SM00490 helicase superfamily c-terminal domain AMK58_RS08565 SM00982 AMK58_RS08565 AMK58_RS08565 SM01058 CarD-like/TRCF domain AMK58_RS08695 SM00344 helix_turn_helix ASNC type AMK58_RS08730 SM00387 Histidine kinase-like ATPases AMK58_RS08730 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS08735 SM00421 helix_turn_helix, Lux Regulon AMK58_RS08735 SM00448 cheY-homologous receiver domain AMK58_RS08740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS08740 SM00091 PAS domain AMK58_RS08740 SM00387 Histidine kinase-like ATPases AMK58_RS08740 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS08765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS08765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS08775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMK58_RS08785 SM00267 diguanylate cyclase AMK58_RS08800 SM01018 B12 binding domain AMK58_RS08815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMK58_RS08835 SM00382 ATPases associated with a variety of cellular activities AMK58_RS08845 SM00479 AMK58_RS08845 AMK58_RS08875 SM00448 cheY-homologous receiver domain AMK58_RS08880 SM00642 Alpha-amylase domain AMK58_RS08885 SM00642 Alpha-amylase domain AMK58_RS08890 SM00642 Alpha-amylase domain AMK58_RS08940 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS08940 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS08950 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMK58_RS08950 SM01080 AMK58_RS08950 AMK58_RS08990 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS09000 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS09035 SM00487 DEAD-like helicases superfamily AMK58_RS09035 SM00490 helicase superfamily c-terminal domain AMK58_RS09045 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMK58_RS09065 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMK58_RS09085 SM00849 Metallo-beta-lactamase superfamily AMK58_RS09100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS09120 SM00271 DnaJ molecular chaperone homology domain AMK58_RS09125 SM00382 ATPases associated with a variety of cellular activities AMK58_RS09135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS09135 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS09140 SM00448 cheY-homologous receiver domain AMK58_RS09140 SM00862 Transcriptional regulatory protein, C terminal AMK58_RS09145 SM00387 Histidine kinase-like ATPases AMK58_RS09160 SM00387 Histidine kinase-like ATPases AMK58_RS09160 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS09190 SM00822 AMK58_RS09190 AMK58_RS09290 SM00382 ATPases associated with a variety of cellular activities AMK58_RS09295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMK58_RS09310 SM00854 Bacterial capsule synthesis protein PGA_cap AMK58_RS09335 SM00861 Transketolase, pyrimidine binding domain AMK58_RS09340 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMK58_RS09360 SM01133 AMK58_RS09360 AMK58_RS09380 SM00829 Enoylreductase AMK58_RS09390 SM00841 Elongation factor P, C-terminal AMK58_RS09390 SM01185 AMK58_RS09390 AMK58_RS09435 SM00704 CDGSH-type zinc finger. Function unknown. AMK58_RS09580 SM00671 Sel1-like repeats. AMK58_RS09610 SM00363 S4 RNA-binding domain AMK58_RS09625 SM00220 Serine/Threonine protein kinases, catalytic domain AMK58_RS09630 SM00788 Adenylosuccinate synthetase AMK58_RS09660 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS09690 SM00448 cheY-homologous receiver domain AMK58_RS09710 SM00138 Methyltransferase, chemotaxis proteins AMK58_RS09715 SM00091 PAS domain AMK58_RS09715 SM00387 Histidine kinase-like ATPases AMK58_RS09715 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS09715 SM00448 cheY-homologous receiver domain AMK58_RS09730 SM00382 ATPases associated with a variety of cellular activities AMK58_RS09745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS09745 SM00387 Histidine kinase-like ATPases AMK58_RS09745 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS09750 SM00448 cheY-homologous receiver domain AMK58_RS09750 SM00862 Transcriptional regulatory protein, C terminal AMK58_RS09755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS09760 SM00028 Tetratricopeptide repeats AMK58_RS09765 SM00838 Elongation factor G C-terminus AMK58_RS09765 SM00889 Elongation factor G, domain IV AMK58_RS09780 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMK58_RS09780 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMK58_RS09780 SM00493 AMK58_RS09780 AMK58_RS09810 SM00478 endonuclease III AMK58_RS09820 SM00487 DEAD-like helicases superfamily AMK58_RS09820 SM00490 helicase superfamily c-terminal domain AMK58_RS09855 SM00400 zinc finger AMK58_RS09855 SM00493 AMK58_RS09855 AMK58_RS09865 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMK58_RS09870 SM00387 Histidine kinase-like ATPases AMK58_RS09870 SM00448 cheY-homologous receiver domain AMK58_RS09925 SM00257 Lysin motif AMK58_RS09940 SM01329 AMK58_RS09940 AMK58_RS09970 SM01329 AMK58_RS09970 AMK58_RS09990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS09990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS10000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMK58_RS10025 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMK58_RS10040 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10050 SM00091 PAS domain AMK58_RS10050 SM00387 Histidine kinase-like ATPases AMK58_RS10050 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS10050 SM00448 cheY-homologous receiver domain AMK58_RS10165 SM00858 AMK58_RS10165 AMK58_RS10175 SM00028 Tetratricopeptide repeats AMK58_RS10245 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10265 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS10265 SM00091 PAS domain AMK58_RS10265 SM00387 Histidine kinase-like ATPases AMK58_RS10265 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS10295 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS10295 SM00895 AMK58_RS10295 AMK58_RS10350 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMK58_RS10355 SM01374 AMK58_RS10355 AMK58_RS10375 SM00322 K homology RNA-binding domain AMK58_RS10390 SM01382 AMK58_RS10390 AMK58_RS10390 SM01383 AMK58_RS10390 AMK58_RS10410 SM01403 AMK58_RS10410 AMK58_RS10420 SM00838 Elongation factor G C-terminus AMK58_RS10420 SM00889 Elongation factor G, domain IV AMK58_RS10440 SM00663 RNA polymerase I subunit A N-terminus AMK58_RS10465 SM00649 Ribosomal protein L11/L12 AMK58_RS10470 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMK58_RS10470 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMK58_RS10500 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMK58_RS10530 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS10545 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10550 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10580 SM00248 ankyrin repeats AMK58_RS10585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS10585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS10595 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10640 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10660 SM00287 Bacterial SH3 domain homologues AMK58_RS10660 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AMK58_RS10665 SM00115 Caspase, interleukin-1 beta converting enzyme (ICE) homologues AMK58_RS10685 SM00829 Enoylreductase AMK58_RS10690 SM00382 ATPases associated with a variety of cellular activities AMK58_RS10700 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS10710 SM00937 AMK58_RS10710 AMK58_RS10730 SM00646 AMK58_RS10730 AMK58_RS10825 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMK58_RS10840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS10955 SM00822 AMK58_RS10955 AMK58_RS10965 SM00904 Riboflavin kinase AMK58_RS11025 SM00853 MutL C terminal dimerisation domain AMK58_RS11025 SM01340 AMK58_RS11025 AMK58_RS11050 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS11050 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS11070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS11070 SM00895 AMK58_RS11070 AMK58_RS11075 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11120 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMK58_RS11120 SM00895 AMK58_RS11120 AMK58_RS11150 SM00825 Beta-ketoacyl synthase AMK58_RS11155 SM00822 AMK58_RS11155 AMK58_RS11165 SM00825 Beta-ketoacyl synthase AMK58_RS11210 SM00563 Phosphate acyltransferases AMK58_RS11270 SM00487 DEAD-like helicases superfamily AMK58_RS11280 SM00062 Bacterial periplasmic substrate-binding proteins AMK58_RS11290 SM00642 Alpha-amylase domain AMK58_RS11305 SM00363 S4 RNA-binding domain AMK58_RS11325 SM01209 AMK58_RS11325 AMK58_RS11325 SM01210 AMK58_RS11325 AMK58_RS11350 SM00028 Tetratricopeptide repeats AMK58_RS11385 SM00852 Probable molybdopterin binding domain AMK58_RS11410 SM00052 Putative diguanylate phosphodiesterase AMK58_RS11410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS11410 SM00091 PAS domain AMK58_RS11410 SM00267 diguanylate cyclase AMK58_RS11410 SM01049 AMK58_RS11410 AMK58_RS11415 SM00998 Adenylosuccinate lyase C-terminus AMK58_RS11440 SM00478 endonuclease III AMK58_RS11460 SM01211 AMK58_RS11460 AMK58_RS11500 SM00363 S4 RNA-binding domain AMK58_RS11500 SM01390 AMK58_RS11500 AMK58_RS11515 SM00850 LytTr DNA-binding domain AMK58_RS11525 SM00917 LeuA allosteric (dimerisation) domain AMK58_RS11530 SM00448 cheY-homologous receiver domain AMK58_RS11535 SM00387 Histidine kinase-like ATPases AMK58_RS11535 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS11535 SM01079 AMK58_RS11535 AMK58_RS11550 SM00840 AMK58_RS11550 AMK58_RS11605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS11605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS11605 SM01358 AMK58_RS11605 AMK58_RS11645 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11650 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11680 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMK58_RS11740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS11740 SM00245 tail specific protease AMK58_RS11765 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11790 SM01049 AMK58_RS11790 AMK58_RS11795 SM00487 DEAD-like helicases superfamily AMK58_RS11795 SM00490 helicase superfamily c-terminal domain AMK58_RS11845 SM00387 Histidine kinase-like ATPases AMK58_RS11870 SM00880 AMK58_RS11870 AMK58_RS11870 SM01118 AMK58_RS11870 AMK58_RS11885 SM00493 AMK58_RS11885 AMK58_RS11895 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11965 SM00382 ATPases associated with a variety of cellular activities AMK58_RS11985 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS12035 SM00481 DNA polymerase alpha chain like domain AMK58_RS12045 SM01144 AMK58_RS12045 AMK58_RS12055 SM00978 AMK58_RS12055 AMK58_RS12065 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS12125 SM00052 Putative diguanylate phosphodiesterase AMK58_RS12125 SM00091 PAS domain AMK58_RS12125 SM00267 diguanylate cyclase AMK58_RS12165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS12180 SM00357 Cold shock protein domain AMK58_RS12260 SM00382 ATPases associated with a variety of cellular activities AMK58_RS12260 SM00962 SRP54-type protein, GTPase domain AMK58_RS12260 SM00963 SRP54-type protein, helical bundle domain AMK58_RS12285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMK58_RS12285 SM00267 diguanylate cyclase AMK58_RS12320 SM00855 Phosphoglycerate mutase family AMK58_RS12340 SM00382 ATPases associated with a variety of cellular activities AMK58_RS12345 SM00387 Histidine kinase-like ATPases AMK58_RS12350 SM00448 cheY-homologous receiver domain AMK58_RS12360 SM00419 helix_turn_helix, cAMP Regulatory protein AMK58_RS12375 SM00984 UDP binding domain AMK58_RS12380 SM00822 AMK58_RS12380 AMK58_RS12410 SM00710 Parallel beta-helix repeats AMK58_RS12535 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS12555 SM00271 DnaJ molecular chaperone homology domain AMK58_RS12570 SM00327 von Willebrand factor (vWF) type A domain AMK58_RS12600 SM00267 diguanylate cyclase AMK58_RS12610 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMK58_RS12635 SM00411 bacterial (prokaryotic) histone like domain AMK58_RS12645 SM00316 Ribosomal protein S1-like RNA-binding domain AMK58_RS12685 SM00852 Probable molybdopterin binding domain AMK58_RS12690 SM00852 Probable molybdopterin binding domain AMK58_RS12695 SM00267 diguanylate cyclase AMK58_RS12695 SM00448 cheY-homologous receiver domain AMK58_RS12700 SM00091 PAS domain AMK58_RS12700 SM00387 Histidine kinase-like ATPases AMK58_RS12700 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS12700 SM00448 cheY-homologous receiver domain AMK58_RS12705 SM00387 Histidine kinase-like ATPases AMK58_RS12705 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS12705 SM00448 cheY-homologous receiver domain AMK58_RS12745 SM00850 LytTr DNA-binding domain AMK58_RS12775 SM00479 AMK58_RS12775 AMK58_RS12785 SM00387 Histidine kinase-like ATPases AMK58_RS12795 SM00100 Cyclic nucleotide-monophosphate binding domain AMK58_RS12795 SM00116 Domain in cystathionine beta-synthase and other proteins. AMK58_RS12860 SM00248 ankyrin repeats AMK58_RS12870 SM00487 DEAD-like helicases superfamily AMK58_RS12870 SM00490 helicase superfamily c-terminal domain AMK58_RS12880 SM00957 SecA DEAD-like domain AMK58_RS12880 SM00958 SecA preprotein cross-linking domain AMK58_RS12905 SM00341 Helicase and RNase D C-terminal AMK58_RS12905 SM00487 DEAD-like helicases superfamily AMK58_RS12905 SM00490 helicase superfamily c-terminal domain AMK58_RS12905 SM00956 AMK58_RS12905 AMK58_RS12990 SM00357 Cold shock protein domain AMK58_RS13020 SM00347 helix_turn_helix multiple antibiotic resistance protein AMK58_RS13025 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13030 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13055 SM00028 Tetratricopeptide repeats AMK58_RS13075 SM00052 Putative diguanylate phosphodiesterase AMK58_RS13075 SM00267 diguanylate cyclase AMK58_RS13105 SM00014 Acid phosphatase homologues AMK58_RS13115 SM00267 diguanylate cyclase AMK58_RS13145 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13180 SM01060 AMK58_RS13180 AMK58_RS13190 SM00883 Chaperonin 10 Kd subunit AMK58_RS13225 SM00155 Phospholipase D. Active site motifs. AMK58_RS13240 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMK58_RS13270 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS13285 SM00387 Histidine kinase-like ATPases AMK58_RS13285 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS13360 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13365 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS13470 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13475 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13585 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13635 SM00421 helix_turn_helix, Lux Regulon AMK58_RS13690 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13690 SM00843 AMK58_RS13690 AMK58_RS13700 SM00938 Nitrogen regulatory protein P-II AMK58_RS13720 SM00897 FIST N domain AMK58_RS13720 SM01204 AMK58_RS13720 AMK58_RS13730 SM00382 ATPases associated with a variety of cellular activities AMK58_RS13740 SM00267 diguanylate cyclase AMK58_RS13745 SM00271 DnaJ molecular chaperone homology domain AMK58_RS13770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS13770 SM00091 PAS domain AMK58_RS13770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS13775 SM00448 cheY-homologous receiver domain AMK58_RS13800 SM00729 Elongator protein 3, MiaB family, Radical SAM AMK58_RS13805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS13805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS13805 SM01049 AMK58_RS13805 AMK58_RS13820 SM00530 Helix-turn-helix XRE-family like proteins AMK58_RS13870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMK58_RS13870 SM00534 ATPase domain of DNA mismatch repair MUTS family AMK58_RS13890 SM00448 cheY-homologous receiver domain AMK58_RS14460 SM00932 Scaffold protein Nfu/NifU N terminal AMK58_RS16165 SM00091 PAS domain AMK58_RS16165 SM00479 AMK58_RS16165 AMK58_RS16715 SM00091 PAS domain AMK58_RS16715 SM00267 diguanylate cyclase AMK58_RS17390 SM00490 helicase superfamily c-terminal domain AMK58_RS18155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS18900 SM00829 Enoylreductase AMK58_RS19485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS19485 SM00091 PAS domain AMK58_RS19925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS20470 SM00487 DEAD-like helicases superfamily AMK58_RS20860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMK58_RS22580 SM00382 ATPases associated with a variety of cellular activities AMK58_RS22790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS23670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMK58_RS23670 SM00091 PAS domain AMK58_RS23670 SM00388 His Kinase A (phosphoacceptor) domain AMK58_RS23970 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMK58_RS25070 SM00855 Phosphoglycerate mutase family AMK58_RS25125 SM00382 ATPases associated with a variety of cellular activities AMK58_RS25950 SM00387 Histidine kinase-like ATPases AMK58_RS26100 SM00873 B3/4 domain AMK58_RS26100 SM00874 tRNA synthetase B5 domain AMK58_RS26875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMK58_RS27200 SM00091 PAS domain AMK58_RS27225 SM00331 Sigma factor PP2C-like phosphatases AMK58_RS27395 SM01329 AMK58_RS27395 AMK58_RS27505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMK58_RS28245 SM00925 MltA specific insert domain AMK58_RS28400 SM00932 Scaffold protein Nfu/NifU N terminal