AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 SMART SM00116 13 62 0.0032 T 22-04-2016 IPR000644 CBS domain AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 SMART SM00116 80 127 6.5E-8 T 22-04-2016 IPR000644 CBS domain AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 PANTHER PTHR11911 5 137 1.8E-22 T 22-04-2016 AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 Pfam PF00571 CBS domain 5 60 3.2E-8 T 22-04-2016 IPR000644 CBS domain AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 Pfam PF00571 CBS domain 74 123 3.3E-14 T 22-04-2016 IPR000644 CBS domain AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 SUPERFAMILY SSF54631 3 131 1.24E-29 T 22-04-2016 AMK58_RS03765 4d47ec46b84348161b08db58de07a62e 145 Gene3D G3DSA:3.10.580.10 3 123 1.6E-31 T 22-04-2016 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 Pfam PF00162 Phosphoglycerate kinase 7 387 1.4E-145 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 8.02E-78 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 SUPERFAMILY SSF53748 4 397 4.36E-147 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 Gene3D G3DSA:3.40.50.1270 180 385 3.0E-75 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PANTHER PTHR11406 6 398 9.4E-190 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 PIRSF PIRSF000724 1 398 5.7E-146 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 Gene3D G3DSA:3.40.50.1260 5 179 5.2E-71 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS11880 5ea1ee25cc8dd41f66654784301c58fa 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 397 39.056 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK58_RS10025 46cc58c34f5feb687e18ca78cda3ac0a 281 Pfam PF07728 AAA domain (dynein-related subfamily) 29 171 2.6E-13 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMK58_RS10025 46cc58c34f5feb687e18ca78cda3ac0a 281 SMART SM00382 25 183 4.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10025 46cc58c34f5feb687e18ca78cda3ac0a 281 Gene3D G3DSA:3.40.50.300 9 203 1.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10025 46cc58c34f5feb687e18ca78cda3ac0a 281 PANTHER PTHR22908 1 235 2.2E-73 T 22-04-2016 AMK58_RS10025 46cc58c34f5feb687e18ca78cda3ac0a 281 SUPERFAMILY SSF52540 7 237 2.61E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Gene3D G3DSA:3.40.1170.10 16 135 1.2E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SMART SM00534 638 825 2.9E-110 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Gene3D G3DSA:3.30.420.110 142 273 2.1E-29 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SUPERFAMILY SSF55271 15 130 4.32E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SUPERFAMILY SSF48334 285 591 1.31E-74 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Pfam PF05190 MutS family domain IV 451 545 1.5E-15 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SMART SM00533 301 618 9.7E-72 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 18 895 8.7E-260 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 PANTHER PTHR11361 18 894 0.0 T 22-04-2016 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SUPERFAMILY SSF53150 132 298 8.24E-36 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 SUPERFAMILY SSF52540 594 828 8.96E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Pfam PF05192 MutS domain III 287 586 9.2E-39 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Gene3D G3DSA:1.10.1420.10 282 474 1.6E-43 T 22-04-2016 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Pfam PF05188 MutS domain II 143 268 1.5E-20 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 PANTHER PTHR11361:SF86 18 894 0.0 T 22-04-2016 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 17 890 23.465 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 719 735 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Pfam PF00488 MutS domain V 641 828 1.1E-82 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Pfam PF01624 MutS domain I 18 134 3.0E-44 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS00055 e56988d1f665c519ff65bfcaca1de994 899 Gene3D G3DSA:3.40.50.300 595 828 1.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 PANTHER PTHR12302:SF0 5 134 2.2E-13 T 22-04-2016 AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 Pfam PF00565 Staphylococcal nuclease homologue 58 135 8.6E-6 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 SUPERFAMILY SSF50199 25 141 6.41E-20 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 Gene3D G3DSA:2.40.50.90 28 132 3.7E-16 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 SMART SM00318 27 144 0.0014 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS02075 f852ffcf9eb955c1a285531d806ad5c0 149 PANTHER PTHR12302 5 134 2.2E-13 T 22-04-2016 AMK58_RS05880 17a7509036a82e359393f9dea7742094 137 Pfam PF03640 Secreted repeat of unknown function 39 81 6.4E-15 T 22-04-2016 IPR005297 Lipoprotein repeat AMK58_RS05880 17a7509036a82e359393f9dea7742094 137 Pfam PF03640 Secreted repeat of unknown function 93 135 1.6E-20 T 22-04-2016 IPR005297 Lipoprotein repeat AMK58_RS05880 17a7509036a82e359393f9dea7742094 137 PANTHER PTHR39335 8 137 7.0E-46 T 22-04-2016 AMK58_RS05880 17a7509036a82e359393f9dea7742094 137 PIRSF PIRSF029720 3 137 4.3E-53 T 22-04-2016 IPR014558 Uncharacterised conserved lipoprotein AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 PANTHER PTHR23105:SF51 19 233 9.9E-86 T 22-04-2016 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.3E-101 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 1.8E-53 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 Gene3D G3DSA:3.30.190.20 161 227 1.1E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 Gene3D G3DSA:3.30.190.20 16 68 1.1E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 PIRSF PIRSF002155 1 227 5.3E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 Gene3D G3DSA:3.40.50.790 69 159 5.0E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.006 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 SUPERFAMILY SSF56808 7 226 7.06E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like AMK58_RS10460 6aa4430a2161043f2c2e30e23c7b771e 233 PANTHER PTHR23105 19 233 9.9E-86 T 22-04-2016 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Pfam PF08447 PAS fold 234 315 6.3E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Gene3D G3DSA:1.20.120.160 744 848 4.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Pfam PF00512 His Kinase A (phospho-acceptor) domain 344 409 4.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 331 2.4E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Pfam PF07694 5TMR of 5TMR-LYT 40 189 7.1E-22 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SMART SM00387 456 568 4.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SUPERFAMILY SSF55874 398 565 1.06E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SMART SM00448 590 704 7.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 525 1.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 1.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 1.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 511 1.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 566 2.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Gene3D G3DSA:3.30.450.20 199 322 3.7E-23 T 22-04-2016 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SUPERFAMILY SSF47384 329 410 5.69E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Gene3D G3DSA:3.30.565.10 410 571 1.4E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SUPERFAMILY SSF52172 589 709 2.99E-35 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Gene3D G3DSA:3.40.50.2300 588 709 4.2E-37 T 22-04-2016 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SUPERFAMILY SSF47226 745 848 9.57E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SUPERFAMILY SSF55785 193 322 1.19E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 SMART SM00388 344 409 5.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 PANTHER PTHR24423 152 758 8.2E-163 T 22-04-2016 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Gene3D G3DSA:1.10.287.130 338 405 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12705 c49b0d1807598b68284a0d96f61ace47 870 Pfam PF00072 Response regulator receiver domain 592 704 1.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 Gene3D G3DSA:3.40.50.1950 7 188 3.3E-67 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 377 2.6E-66 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 SUPERFAMILY SSF52507 6 184 4.58E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 SUPERFAMILY SSF102645 191 406 5.75E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 Pfam PF02441 Flavoprotein 10 138 3.4E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 PANTHER PTHR14359 6 403 6.7E-164 T 22-04-2016 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 8 401 1.2E-121 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 PANTHER PTHR14359:SF20 6 403 6.7E-164 T 22-04-2016 AMK58_RS01095 0642b4767ccd53bd414c66916e841436 418 Gene3D G3DSA:3.40.50.10300 190 405 3.1E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS11335 84a7a250dc327d144833c0e0ef02798a 290 PANTHER PTHR10037 30 263 7.5E-33 T 22-04-2016 AMK58_RS11335 84a7a250dc327d144833c0e0ef02798a 290 SUPERFAMILY SSF81324 27 231 5.34E-27 T 22-04-2016 AMK58_RS11335 84a7a250dc327d144833c0e0ef02798a 290 Gene3D G3DSA:1.20.120.350 52 119 4.1E-9 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain AMK58_RS11335 84a7a250dc327d144833c0e0ef02798a 290 Pfam PF00520 Ion transport protein 27 236 1.4E-36 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AMK58_RS11335 84a7a250dc327d144833c0e0ef02798a 290 PANTHER PTHR10037:SF62 30 263 7.5E-33 T 22-04-2016 AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 SUPERFAMILY SSF51182 7 282 2.05E-85 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 Pfam PF05726 Pirin C-terminal cupin domain 180 282 1.8E-29 T 22-04-2016 IPR008778 Pirin, C-terminal domain AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 Gene3D G3DSA:2.60.120.10 6 256 5.8E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 PANTHER PTHR13903:SF8 4 282 1.6E-121 T 22-04-2016 AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 PIRSF PIRSF006232 5 282 6.8E-96 T 22-04-2016 IPR012093 Pirin AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 PANTHER PTHR13903 4 282 1.6E-121 T 22-04-2016 IPR012093 Pirin AMK58_RS12585 e066cf9d4b0be2e78da6fd8e06ed45c9 282 Pfam PF02678 Pirin 24 124 2.8E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 PANTHER PTHR14503 2 44 2.6E-21 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.4E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 2 39 3.0E-11 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.026 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12440 0ecce848988edde9c9a38205d1a5f6d2 44 Pfam PF00468 Ribosomal protein L34 2 44 1.9E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 SUPERFAMILY SSF55174 21 70 3.3E-6 T 22-04-2016 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 Pfam PF00849 RNA pseudouridylate synthase 110 261 8.2E-37 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 324 1.9E-63 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 150 164 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 PANTHER PTHR11079:SF74 92 335 1.3E-75 T 22-04-2016 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 SUPERFAMILY SSF55120 98 328 1.5E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS05855 600d4095413dd41c5103fd17741abd22 339 PANTHER PTHR11079 92 335 1.3E-75 T 22-04-2016 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 Gene3D G3DSA:3.40.1280.10 11 172 2.8E-63 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 PANTHER PTHR32125:SF1 15 245 1.7E-92 T 22-04-2016 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 Gene3D G3DSA:1.10.1270.20 173 250 9.3E-27 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 266 100.923 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 SUPERFAMILY SSF75217 11 250 9.16E-89 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 14 246 1.0E-78 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 PANTHER PTHR32125 15 245 1.7E-92 T 22-04-2016 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 33 238 2.2E-50 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK58_RS12245 04eefbafcee19499e43389057462c64e 266 PIRSF PIRSF000386 11 261 2.2E-87 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.2E-26 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 PANTHER PTHR21026:SF2 1 55 1.2E-22 T 22-04-2016 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 PANTHER PTHR21026 1 55 1.2E-22 T 22-04-2016 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 Pfam PF01783 Ribosomal L32p protein family 2 56 7.5E-27 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 SUPERFAMILY SSF57829 1 55 3.66E-23 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMK58_RS08270 a8f1d1ab5d8c22b206d6d08e44259181 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.277 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 546 6.7E-41 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1070 13.035 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1078 13.361 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SMART SM00851 964 1050 3.6E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.40.50.20 536 671 1.1E-55 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF52335 944 1079 3.66E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1061 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF52440 561 684 7.77E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.30.1490.20 697 753 1.8E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 848 855 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Pfam PF02142 MGS-like domain 966 1050 2.0E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.8E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF56059 682 942 7.6E-101 T 22-04-2016 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.30.470.20 200 398 2.7E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.30.470.20 754 943 4.9E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.40.50.1380 947 1078 2.3E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-67 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 682 884 2.9E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PANTHER PTHR11405:SF47 3 1079 0.0 T 22-04-2016 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:1.10.1030.10 399 535 2.8E-48 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 PANTHER PTHR11405 3 1079 0.0 T 22-04-2016 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.30.1490.20 142 199 1.2E-19 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 718 732 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF48108 395 549 1.57E-47 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 Gene3D G3DSA:3.40.50.20 3 107 6.8E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF56059 128 400 1.24E-104 T 22-04-2016 AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SUPERFAMILY SSF52440 1 127 3.6E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03370 53bfef73c0c9a2f4b6b920725ed4d72e 1083 SMART SM01096 424 546 3.3E-69 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.102 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 6.1E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 SUPERFAMILY SSF51278 1 101 1.7E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 Gene3D G3DSA:2.10.150.10 1 101 9.6E-51 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 Pfam PF00699 Urease beta subunit 3 99 1.3E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 PANTHER PTHR33569:SF1 1 101 2.7E-60 T 22-04-2016 AMK58_RS07080 cb98cc0ea72a08dd4950b731e460cf82 101 PANTHER PTHR33569 1 101 2.7E-60 T 22-04-2016 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Gene3D G3DSA:3.30.450.20 17 126 3.3E-13 T 22-04-2016 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Gene3D G3DSA:1.10.287.130 149 218 6.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SMART SM00387 266 377 2.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SUPERFAMILY SSF55874 212 377 1.44E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SUPERFAMILY SSF52172 398 516 4.55E-23 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Pfam PF08448 PAS fold 23 127 6.7E-11 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Gene3D G3DSA:3.30.565.10 227 381 4.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PANTHER PTHR24423:SF439 19 501 3.2E-113 T 22-04-2016 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SMART SM00448 396 510 6.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SUPERFAMILY SSF47384 143 222 1.04E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 222 3.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Gene3D G3DSA:3.40.50.2300 399 516 6.7E-21 T 22-04-2016 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SMART SM00388 157 222 2.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SMART SM00091 17 83 5.3E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 136 2.2E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Pfam PF00072 Response regulator receiver domain 399 510 3.4E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 SUPERFAMILY SSF55785 19 123 4.54E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 2.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 2.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 2.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 330 2.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 375 2.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03585 3ac08a50d9402f402691d205f56cd2ba 520 PANTHER PTHR24423 19 501 3.2E-113 T 22-04-2016 AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 PANTHER PTHR35089 7 185 3.7E-22 T 22-04-2016 AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 SUPERFAMILY SSF111384 39 179 3.27E-26 T 22-04-2016 IPR024930 Skp domain AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 Pfam PF03938 Outer membrane protein (OmpH-like) 14 177 5.2E-28 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 Gene3D G3DSA:3.30.910.20 38 92 3.3E-7 T 22-04-2016 AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 Gene3D G3DSA:3.30.910.20 97 179 1.0E-8 T 22-04-2016 AMK58_RS06310 02d9f60b241a3702b4fb4794063f55dc 192 SMART SM00935 11 179 1.7E-37 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 PANTHER PTHR10160:SF24 1 462 2.3E-242 T 22-04-2016 AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 PANTHER PTHR10160 1 462 2.3E-242 T 22-04-2016 AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 SUPERFAMILY SSF52467 290 462 8.18E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 4.9E-195 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 Gene3D G3DSA:3.40.50.1220 290 463 1.8E-86 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06905 f40e2c59b78ab36a7de13313db465c26 464 PIRSF PIRSF000204 1 464 5.9E-217 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 7.8E-105 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 PANTHER PTHR20919 2 312 1.8E-112 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 PIRSF PIRSF000450 1 307 1.0E-130 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 SUPERFAMILY SSF52317 18 296 4.06E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 5.0E-104 T 22-04-2016 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 Pfam PF04204 Homoserine O-succinyltransferase 2 298 1.3E-123 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 300 48.667 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 Gene3D G3DSA:3.40.50.880 34 300 2.6E-107 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS02625 f0722147b52f7d75349e6c8b4591eaa6 315 PANTHER PTHR20919:SF0 2 312 1.8E-112 T 22-04-2016 AMK58_RS12560 244775b6d10d33297a12bb9eef9087c8 334 Gene3D G3DSA:3.40.50.300 63 235 1.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12560 244775b6d10d33297a12bb9eef9087c8 334 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 12 329 2.4E-186 T 22-04-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS12560 244775b6d10d33297a12bb9eef9087c8 334 Pfam PF07728 AAA domain (dynein-related subfamily) 73 195 2.7E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMK58_RS12560 244775b6d10d33297a12bb9eef9087c8 334 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 16 46 1.7E-18 T 22-04-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS12560 244775b6d10d33297a12bb9eef9087c8 334 SUPERFAMILY SSF52540 60 290 1.83E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04035 55ef31083854873dbc641f45ad4d2263 129 Gene3D G3DSA:1.20.1290.10 3 127 1.4E-36 T 22-04-2016 IPR029032 AhpD-like AMK58_RS04035 55ef31083854873dbc641f45ad4d2263 129 PANTHER PTHR35446 4 117 5.3E-26 T 22-04-2016 AMK58_RS04035 55ef31083854873dbc641f45ad4d2263 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 118 2.0E-17 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS04035 55ef31083854873dbc641f45ad4d2263 129 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 106 7.7E-18 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS04035 55ef31083854873dbc641f45ad4d2263 129 SUPERFAMILY SSF69118 3 126 1.44E-35 T 22-04-2016 IPR029032 AhpD-like AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Gene3D G3DSA:1.10.8.60 375 444 1.1E-23 T 22-04-2016 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Gene3D G3DSA:3.30.450.20 80 169 7.7E-10 T 22-04-2016 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Gene3D G3DSA:3.40.50.300 198 374 3.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 SUPERFAMILY SSF52540 201 444 9.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 415 424 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 SMART SM00382 221 366 5.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 PANTHER PTHR32071:SF3 1 509 2.0E-171 T 22-04-2016 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 510 2.0E-22 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 SMART SM00091 79 146 9.7E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 225 238 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Pfam PF00989 PAS fold 80 127 1.5E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 SUPERFAMILY SSF55785 80 175 7.85E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Gene3D G3DSA:1.10.10.60 457 509 3.2E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Pfam PF00158 Sigma-54 interaction domain 201 368 2.0E-64 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 SUPERFAMILY SSF46689 459 509 4.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 PANTHER PTHR32071 1 509 2.0E-171 T 22-04-2016 AMK58_RS07030 cc15597144a471ec4e14dfee1cb2f606 513 Gene3D G3DSA:3.30.70.260 2 36 6.3E-4 T 22-04-2016 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SUPERFAMILY SSF55785 356 471 6.46E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Gene3D G3DSA:3.20.20.450 659 907 4.2E-99 T 22-04-2016 IPR001633 EAL domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Pfam PF08448 PAS fold 370 476 4.7E-8 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SUPERFAMILY SSF55073 490 647 1.8E-51 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 484 644 3.9E-42 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Pfam PF00563 EAL domain 662 897 3.7E-76 T 22-04-2016 IPR001633 EAL domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SUPERFAMILY SSF141868 662 907 2.62E-89 T 22-04-2016 IPR001633 EAL domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Gene3D G3DSA:3.30.450.20 356 471 4.3E-13 T 22-04-2016 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SMART SM00267 474 646 9.7E-67 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SMART SM01079 90 278 4.7E-38 T 22-04-2016 IPR006189 CHASE domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Pfam PF00990 Diguanylate cyclase, GGDEF domain 485 641 8.3E-51 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Gene3D G3DSA:3.30.70.270 487 652 2.0E-60 T 22-04-2016 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 Pfam PF03924 CHASE domain 93 268 1.7E-32 T 22-04-2016 IPR006189 CHASE domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 PANTHER PTHR10799 463 756 9.4E-90 T 22-04-2016 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 PANTHER PTHR10799:SF774 463 756 9.4E-90 T 22-04-2016 AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 360 480 6.7E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS05960 a7e06198ff0531baa7283391f565a494 928 SMART SM00052 656 902 9.2E-114 T 22-04-2016 IPR001633 EAL domain AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PRINTS PR00103 cAMP-dependent protein kinase signature 80 89 2.0E-5 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PRINTS PR00103 cAMP-dependent protein kinase signature 36 50 2.0E-5 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PRINTS PR00103 cAMP-dependent protein kinase signature 92 103 2.0E-5 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PRINTS PR00103 cAMP-dependent protein kinase signature 51 65 2.0E-5 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 Gene3D G3DSA:2.60.120.10 8 146 1.5E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 SUPERFAMILY SSF51206 8 142 7.46E-34 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PANTHER PTHR24567:SF36 1 146 1.9E-18 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 SMART SM00100 15 132 1.7E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 4.1E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 PANTHER PTHR24567 1 146 1.9E-18 T 22-04-2016 AMK58_RS00220 51d11b54ddc5bfaa82430b6360f61fff 151 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 82 99 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 507 1.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 3.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 3.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 3.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 3.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SUPERFAMILY SSF55785 17 130 5.5E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 349 1.9E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SMART SM00387 395 508 6.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SMART SM00388 280 349 2.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SMART SM00091 144 210 9.3E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SMART SM00091 17 83 2.4E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 139 1.2E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 267 6.7E-25 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Gene3D G3DSA:3.30.450.20 132 256 3.3E-28 T 22-04-2016 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SUPERFAMILY SSF55785 129 257 2.36E-26 T 22-04-2016 IPR000014 PAS domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Pfam PF00989 PAS fold 145 242 2.2E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Pfam PF00989 PAS fold 18 129 7.7E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Gene3D G3DSA:3.30.450.20 16 130 1.9E-23 T 22-04-2016 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SUPERFAMILY SSF47384 265 350 1.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Gene3D G3DSA:1.10.287.130 273 334 2.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 Gene3D G3DSA:3.30.565.10 335 506 2.9E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 PANTHER PTHR24423 15 508 1.0E-125 T 22-04-2016 AMK58_RS00535 b0c5c2e8836ac10229abca06d70eee4d 513 SUPERFAMILY SSF55874 338 506 5.37E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Pfam PF14520 Helix-hairpin-helix domain 366 405 1.9E-4 T 22-04-2016 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF54814 197 274 2.49E-31 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SMART SM00316 131 197 1.2E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Pfam PF00575 S1 RNA binding domain 129 191 5.4E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:3.30.300.20 276 343 1.1E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF47794 351 411 1.1E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:2.40.50.140 126 195 5.5E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF50249 129 196 2.42E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:3.30.1480.10 2 123 8.6E-48 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SMART SM00322 227 299 2.1 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SMART SM00322 300 411 0.037 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 PANTHER PTHR22648 1 445 3.9E-175 T 22-04-2016 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:3.30.300.20 196 274 1.5E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF54814 276 339 1.05E-17 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 362 410 7.1E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 407 30.544 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF47794 427 491 2.04E-9 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 2 339 5.5E-137 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 PANTHER PTHR22648:SF0 1 445 3.9E-175 T 22-04-2016 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:1.10.150.20 426 493 1.2E-20 T 22-04-2016 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Gene3D G3DSA:1.10.150.20 352 413 4.8E-19 T 22-04-2016 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 SUPERFAMILY SSF69705 2 123 5.62E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Pfam PF08529 NusA N-terminal domain 2 122 8.1E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK58_RS00750 31c789a6eda0c10e8ad76ccec731b3f1 511 Pfam PF13184 NusA-like KH domain 227 293 5.8E-28 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 AMK58_RS12425 c8afd28778442545f66f3ddbedd4f996 334 Gene3D G3DSA:3.90.550.10 22 226 8.2E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS12425 c8afd28778442545f66f3ddbedd4f996 334 PANTHER PTHR22916 19 232 1.4E-33 T 22-04-2016 AMK58_RS12425 c8afd28778442545f66f3ddbedd4f996 334 Pfam PF00535 Glycosyl transferase family 2 21 152 1.6E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS12425 c8afd28778442545f66f3ddbedd4f996 334 PANTHER PTHR22916:SF29 19 232 1.4E-33 T 22-04-2016 AMK58_RS12425 c8afd28778442545f66f3ddbedd4f996 334 SUPERFAMILY SSF53448 19 227 4.69E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 Gene3D G3DSA:3.60.15.10 5 271 1.5E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 SUPERFAMILY SSF56281 5 271 6.16E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 PANTHER PTHR12553:SF7 4 271 6.0E-56 T 22-04-2016 AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 Pfam PF12706 Beta-lactamase superfamily domain 62 243 3.1E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 SMART SM00849 47 242 0.0044 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS07810 65013b36d596e24b8923b3b4733d779a 271 PANTHER PTHR12553 4 271 6.0E-56 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Pfam PF06827 Zinc finger found in FPG and IleRS 916 942 1.4E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 SUPERFAMILY SSF47323 668 946 2.4E-62 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Gene3D G3DSA:3.90.740.10 210 405 1.1E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PANTHER PTHR11946 7 255 0.0 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PANTHER PTHR11946 289 891 0.0 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Pfam PF08264 Anticodon-binding domain of tRNA 700 855 2.6E-21 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 SUPERFAMILY SSF50677 207 419 2.35E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 861 4.7E-260 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Gene3D G3DSA:1.10.730.10 659 844 2.9E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 SUPERFAMILY SSF52374 5 206 2.62E-133 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 SUPERFAMILY SSF52374 419 662 2.62E-133 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Gene3D G3DSA:3.40.50.620 18 209 2.7E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Gene3D G3DSA:3.40.50.620 419 653 2.7E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PANTHER PTHR11946:SF11 7 255 0.0 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PANTHER PTHR11946:SF11 289 891 0.0 T 22-04-2016 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 656 4.1E-199 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 946 20.273 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 4.9E-30 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 4.9E-30 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 543 556 4.9E-30 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 417 432 4.9E-30 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS10975 69bfc83a834e68c4af08499e374e5517 951 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 4.9E-30 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK58_RS03110 5e127db93ccd0326b8febcdc2f9a1654 214 Gene3D G3DSA:1.25.40.10 37 133 3.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03110 5e127db93ccd0326b8febcdc2f9a1654 214 SUPERFAMILY SSF48452 37 133 1.59E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 PANTHER PTHR30347 31 351 6.0E-90 T 22-04-2016 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 Gene3D G3DSA:3.30.420.10 201 330 2.7E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 Pfam PF13565 Homeodomain-like domain 60 131 9.1E-12 T 22-04-2016 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 Pfam PF13358 DDE superfamily endonuclease 172 318 3.9E-19 T 22-04-2016 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 SUPERFAMILY SSF46689 24 133 8.42E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 PANTHER PTHR30347:SF1 31 351 6.0E-90 T 22-04-2016 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 SUPERFAMILY SSF53098 204 332 9.29E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02925 12ba0edb9f92b70cf0526af9607b98fa 356 Gene3D G3DSA:1.10.10.60 41 63 1.3E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 Pfam PF13458 Periplasmic binding protein 36 381 1.8E-75 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 Gene3D G3DSA:3.40.50.2300 301 366 1.9E-48 T 22-04-2016 AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 Gene3D G3DSA:3.40.50.2300 33 161 1.9E-48 T 22-04-2016 AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 PANTHER PTHR30483:SF15 1 407 4.8E-161 T 22-04-2016 AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 SUPERFAMILY SSF53822 36 393 5.72E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS10535 36b826779b7868ac341565db5258f4da 409 PANTHER PTHR30483 1 407 4.8E-161 T 22-04-2016 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Gene3D G3DSA:3.30.1360.120 148 235 1.4E-53 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Gene3D G3DSA:3.30.1360.120 8 60 1.4E-53 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Gene3D G3DSA:3.30.70.1400 61 145 1.4E-32 T 22-04-2016 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 PIRSF PIRSF006487 1 370 3.9E-87 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 8 364 6.0E-109 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 360 5.4E-25 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 SUPERFAMILY SSF103025 7 282 1.08E-90 T 22-04-2016 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 SUPERFAMILY SSF101790 276 369 1.16E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 258 3.4E-88 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 PANTHER PTHR13847 1 369 4.8E-165 T 22-04-2016 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 PANTHER PTHR13847:SF209 1 369 4.8E-165 T 22-04-2016 AMK58_RS09430 84519789715bbe7e9078f20dc9884cd7 370 Gene3D G3DSA:2.40.30.110 282 358 9.9E-29 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PRINTS PR01805 VacJ lipoprotein signature 109 126 8.4E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PRINTS PR01805 VacJ lipoprotein signature 58 74 8.4E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PRINTS PR01805 VacJ lipoprotein signature 41 54 8.4E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PRINTS PR01805 VacJ lipoprotein signature 145 162 8.4E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PANTHER PTHR30035:SF3 23 234 2.0E-48 T 22-04-2016 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 Pfam PF04333 MlaA lipoprotein 40 236 4.7E-67 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS08820 d4e52c4bd23ca8c6f88cb50c9353963b 258 PANTHER PTHR30035 23 234 2.0E-48 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:3.40.50.300 5 213 2.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF50447 205 303 1.51E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.8E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF50465 300 395 5.47E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 1.4E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PANTHER PTHR23115:SF112 1 396 1.7E-253 T 22-04-2016 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.3E-57 T 22-04-2016 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:2.40.30.10 302 395 1.0E-45 T 22-04-2016 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:2.40.30.10 214 300 5.6E-37 T 22-04-2016 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PANTHER PTHR23115 1 396 1.7E-253 T 22-04-2016 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF52540 9 228 6.54E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 2.4E-228 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10415 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:3.40.50.300 5 213 2.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF50447 205 303 1.51E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.8E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF50465 300 395 5.47E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 1.4E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PANTHER PTHR23115:SF112 1 396 1.7E-253 T 22-04-2016 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.3E-57 T 22-04-2016 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:2.40.30.10 302 395 1.0E-45 T 22-04-2016 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 Gene3D G3DSA:2.40.30.10 214 300 5.6E-37 T 22-04-2016 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PANTHER PTHR23115 1 396 1.7E-253 T 22-04-2016 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 SUPERFAMILY SSF52540 9 228 6.54E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 2.4E-228 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10485 460e628b61441cf9fe32165edabc3ed9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SMART SM00304 168 221 0.002 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SMART SM00304 453 513 110.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SUPERFAMILY SSF58104 264 507 1.83E-59 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SUPERFAMILY SSF58104 197 223 1.83E-59 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 Gene3D G3DSA:1.10.287.950 273 483 6.0E-43 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PANTHER PTHR32089 134 203 1.5E-108 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 5.1E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 5.1E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SUPERFAMILY SSF141371 518 601 1.41E-6 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PANTHER PTHR32089 236 515 1.5E-108 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PANTHER PTHR32089:SF56 236 515 1.5E-108 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 PANTHER PTHR32089:SF56 134 203 1.5E-108 T 22-04-2016 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 Pfam PF07238 PilZ domain 520 604 2.8E-7 T 22-04-2016 IPR009875 PilZ domain GO:0035438 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 SMART SM00283 258 512 9.4E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 Pfam PF00672 HAMP domain 148 214 5.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04510 e8f0731dc9c3158876d756855721d804 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 506 1.2E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 Gene3D G3DSA:3.40.50.1000 10 24 1.8E-34 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 Gene3D G3DSA:3.40.50.1000 95 223 1.8E-34 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PANTHER PTHR18901:SF14 4 224 5.4E-48 T 22-04-2016 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 221 1.7E-53 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 187 2.5E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 Gene3D G3DSA:1.10.150.240 26 89 9.2E-13 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PANTHER PTHR18901 4 224 5.4E-48 T 22-04-2016 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.9E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 192 2.8E-27 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS08665 3c25f02fde8e79ba64c16cd79d3d51fb 226 SUPERFAMILY SSF56784 10 222 9.61E-51 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PANTHER PTHR30065:SF1 1 249 2.9E-50 T 22-04-2016 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PANTHER PTHR30065 1 249 2.9E-50 T 22-04-2016 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.1E-18 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 9.1E-18 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 9.1E-18 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.1E-18 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 Pfam PF01311 Bacterial export proteins, family 1 13 246 5.3E-56 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK58_RS10060 59c69fba2d69c3e551e5f4754fa2a4e9 256 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 249 2.1E-53 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PANTHER PTHR24322 15 142 9.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PANTHER PTHR24322 158 191 9.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 Pfam PF00106 short chain dehydrogenase 11 195 1.5E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 SUPERFAMILY SSF51735 7 268 2.21E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.24E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.24E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.24E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 8.88E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.88E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.88E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.88E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 Gene3D G3DSA:3.40.50.720 11 250 1.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 196 0.0036 T 22-04-2016 AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PANTHER PTHR24322:SF57 15 142 9.4E-46 T 22-04-2016 AMK58_RS05965 3883a5baeffff62e456fa695d2739c9a 389 PANTHER PTHR24322:SF57 158 191 9.4E-46 T 22-04-2016 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PANTHER PTHR10836:SF50 1 333 5.5E-203 T 22-04-2016 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 SUPERFAMILY SSF55347 153 315 2.11E-69 T 22-04-2016 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.2E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.2E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.2E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.2E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 4.2E-38 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 1.6E-61 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PIRSF PIRSF000149 1 335 4.1E-140 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 SMART SM00846 3 153 1.8E-99 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 Gene3D G3DSA:3.30.360.10 162 316 2.0E-75 T 22-04-2016 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 PANTHER PTHR10836 1 333 5.5E-203 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 3.3E-133 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 SUPERFAMILY SSF51735 1 172 1.25E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 Gene3D G3DSA:3.40.50.720 1 161 3.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09340 c57e639fbd6287efeccfb49884730980 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 2.3E-65 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 PANTHER PTHR11941:SF54 3 255 2.6E-124 T 22-04-2016 AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 PANTHER PTHR11941 3 255 2.6E-124 T 22-04-2016 AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 Gene3D G3DSA:3.90.226.10 2 256 3.2E-101 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 1.1E-87 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS00900 030a2ff2ec3d5ee684abd5061454fe15 258 SUPERFAMILY SSF52096 1 258 7.24E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 PANTHER PTHR24220 8 236 7.9E-99 T 22-04-2016 AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 SUPERFAMILY SSF52540 4 234 7.58E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 PANTHER PTHR24220:SF568 8 236 7.9E-99 T 22-04-2016 AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 Gene3D G3DSA:3.40.50.300 3 235 7.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 SMART SM00382 31 230 5.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10550 c6df860f32c11215a22e77701167087d 238 Pfam PF00005 ABC transporter 22 166 1.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Gene3D G3DSA:1.10.340.30 23 122 6.5E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.3E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 SMART SM00478 38 185 6.0E-50 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.252 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 SMART SM00525 186 206 2.9E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 PANTHER PTHR10359:SF18 4 203 3.4E-85 T 22-04-2016 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 PANTHER PTHR10359 4 203 3.4E-85 T 22-04-2016 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Gene3D G3DSA:1.10.1670.10 123 208 6.4E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 SUPERFAMILY SSF48150 6 207 8.01E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 PIRSF PIRSF001435 2 209 3.8E-47 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 TIGRFAM TIGR01083 nth: endonuclease III 6 194 2.4E-81 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK58_RS00610 95c9d345ec4c12832a22d5578bde2c45 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.3E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Gene3D G3DSA:3.40.50.300 323 536 6.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Gene3D G3DSA:3.40.50.300 128 280 3.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Gene3D G3DSA:3.40.50.300 10 95 3.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 555 9.6E-298 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Pfam PF12848 ABC transporter 232 299 9.4E-13 T 22-04-2016 IPR032781 ABC-transporter extension domain AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 SUPERFAMILY SSF52540 10 246 3.65E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Pfam PF00005 ABC transporter 342 475 9.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 Pfam PF00005 ABC transporter 24 193 3.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 PANTHER PTHR19211 5 557 0.0 T 22-04-2016 AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 PANTHER PTHR19211:SF7 5 557 0.0 T 22-04-2016 AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 SUPERFAMILY SSF52540 331 522 7.31E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 SMART SM00382 33 234 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 SMART SM00382 350 526 8.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08835 fb7c3887e6960a31f1f01dd2d2f2f43c 558 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Pfam PF02779 Transketolase, pyrimidine binding domain 625 820 1.5E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 SUPERFAMILY SSF52518 609 826 1.28E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 PIRSF PIRSF000157 1 973 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 SMART SM00861 626 819 3.4E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Gene3D G3DSA:3.40.50.970 189 572 4.7E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 112 971 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Pfam PF00676 Dehydrogenase E1 component 239 556 1.3E-57 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 PANTHER PTHR23152 9 90 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 PANTHER PTHR23152 113 971 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 8 47 1.7E-17 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Gene3D G3DSA:3.40.50.970 679 824 1.0E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 SUPERFAMILY SSF52518 148 572 8.1E-92 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS02560 e8402d60831929b8f58573481e2ea370 974 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 823 971 2.4E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 284 408 8.4E-22 T 22-04-2016 IPR000014 PAS domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 666 3.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.30.450.20 44 134 3.6E-6 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SMART SM00388 421 486 3.4E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423:SF491 833 1009 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.40.50.2300 843 972 3.9E-43 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SMART SM00091 285 351 8.2E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF47384 406 487 3.92E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SMART SM00448 855 969 9.7E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SMART SM00448 687 803 1.2E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:1.20.120.160 991 1084 1.2E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423 44 62 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 486 6.7E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.30.565.10 472 666 1.5E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423:SF491 269 565 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.30.450.20 135 243 8.7E-5 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SMART SM00387 533 668 1.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF55785 296 410 1.82E-24 T 22-04-2016 IPR000014 PAS domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423 269 565 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF00072 Response regulator receiver domain 857 969 7.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF00072 Response regulator receiver domain 689 803 7.3E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF02743 Cache domain 6 234 1.1E-17 T 22-04-2016 IPR033479 Double Cache domain 1 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423 585 671 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF52172 854 979 1.1E-39 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.40.50.2300 685 812 2.0E-23 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:3.30.450.20 274 397 1.6E-21 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423:SF491 585 671 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF47226 993 1083 8.64E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF55874 475 668 1.18E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423:SF491 44 62 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Gene3D G3DSA:1.10.287.130 413 471 2.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 SUPERFAMILY SSF52172 686 813 1.01E-21 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 PANTHER PTHR24423 833 1009 1.2E-184 T 22-04-2016 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF01627 Hpt domain 1017 1095 6.9E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS08085 85e4b4d8553f9ae6c2d2a38e1f71e2b8 1097 Pfam PF13426 PAS domain 296 400 6.7E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 11 404 49.347 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 PANTHER PTHR11993 15 399 2.8E-253 T 22-04-2016 AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 SUPERFAMILY SSF56762 30 404 4.32E-143 T 22-04-2016 IPR029014 NiFe hydrogenase-like AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 Gene3D G3DSA:1.10.645.10 20 390 1.2E-64 T 22-04-2016 IPR029014 NiFe hydrogenase-like AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 21 404 3.9E-184 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 57 68 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 134 404 2.5E-129 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 AMK58_RS06135 8bec5335b91cdcd67fa073e3ed26ef97 404 PANTHER PTHR11993:SF10 15 399 2.8E-253 T 22-04-2016 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 150 166 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 Gene3D G3DSA:3.40.47.10 244 399 1.2E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 73 231 3.1E-23 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 PANTHER PTHR11712 96 113 9.9E-57 T 22-04-2016 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 PANTHER PTHR11712 129 397 9.9E-57 T 22-04-2016 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 238 336 3.0E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 SUPERFAMILY SSF53901 8 233 2.62E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 Gene3D G3DSA:3.40.47.10 68 233 3.4E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 SMART SM00825 Beta-ketoacyl synthase 21 402 9.8E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK58_RS11165 001b36b4d14babb2165653c16e4c70ea 403 SUPERFAMILY SSF53901 205 399 3.46E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 Pfam PF00072 Response regulator receiver domain 7 115 1.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 Gene3D G3DSA:1.10.10.10 141 196 8.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 SUPERFAMILY SSF52172 5 147 1.57E-27 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 Gene3D G3DSA:3.40.50.2300 5 140 1.7E-27 T 22-04-2016 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 PANTHER PTHR26402 4 195 1.6E-59 T 22-04-2016 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 PANTHER PTHR26402:SF613 4 195 1.6E-59 T 22-04-2016 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 SMART SM00448 4 115 2.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 SUPERFAMILY SSF46894 132 196 6.12E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 2.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08735 b26c91e14cc23a69fd6e3e4d8f649d41 200 SMART SM00421 139 196 9.5E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 PANTHER PTHR10815:SF5 92 288 1.9E-54 T 22-04-2016 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 PANTHER PTHR10815 92 288 1.9E-54 T 22-04-2016 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 259 265 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Gene3D G3DSA:1.10.10.60 71 112 2.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 211 289 3.9E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 SMART SM00342 33 115 3.0E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Gene3D G3DSA:1.10.10.60 14 70 5.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 209 288 1.4E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Gene3D G3DSA:3.30.160.70 113 187 1.5E-23 T 22-04-2016 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 SUPERFAMILY SSF46767 208 289 6.54E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 SUPERFAMILY SSF53155 121 188 1.04E-16 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Gene3D G3DSA:1.10.10.10 207 290 1.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 SUPERFAMILY SSF46689 16 67 1.26E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00600 895f11694698e2c37611d9439ba1346f 300 Pfam PF12833 Helix-turn-helix domain 39 115 5.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 Pfam PF12804 MobA-like NTP transferase domain 8 165 5.2E-32 T 22-04-2016 IPR025877 MobA-like NTP transferase AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 SUPERFAMILY SSF53448 6 195 3.75E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 PANTHER PTHR19136 6 202 7.0E-38 T 22-04-2016 AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 196 1.9E-60 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 198 26.138 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 PANTHER PTHR19136:SF81 6 202 7.0E-38 T 22-04-2016 AMK58_RS04305 ab3aa8510aad34937293ad84fa7eb36c 208 Gene3D G3DSA:3.90.550.10 4 203 3.0E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 Pfam PF13365 Trypsin-like peptidase domain 5 139 4.7E-34 T 22-04-2016 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 Pfam PF13180 PDZ domain 178 269 3.2E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 Gene3D G3DSA:2.30.42.10 180 275 2.4E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 2 326 3.1E-126 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 SUPERFAMILY SSF50494 3 175 1.09E-59 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 76 100 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 110 127 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 132 149 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 218 230 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 14 26 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PRINTS PR00834 HtrA/DegQ protease family signature 35 55 1.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 Gene3D G3DSA:2.40.10.10 3 76 4.6E-30 T 22-04-2016 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 SMART SM00228 178 260 2.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 PANTHER PTHR22939 5 273 6.5E-109 T 22-04-2016 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 Gene3D G3DSA:2.40.10.10 77 179 3.4E-47 T 22-04-2016 AMK58_RS20860 063d93cd16e3c8ada0dcbe2b8c10d627 327 SUPERFAMILY SSF50156 136 261 1.03E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 Gene3D G3DSA:3.10.105.10 303 504 1.4E-48 T 22-04-2016 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 SUPERFAMILY SSF53850 32 533 1.07E-121 T 22-04-2016 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 Gene3D G3DSA:3.90.76.10 68 158 3.3E-23 T 22-04-2016 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 PANTHER PTHR30290 1 530 3.8E-123 T 22-04-2016 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 3.5E-89 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 PIRSF PIRSF002741 7 534 1.9E-86 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS13045 c6a91276864b0bc2e960dce4cdc782c6 535 Gene3D G3DSA:3.40.190.10 159 302 6.6E-40 T 22-04-2016 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 400 5.0E-192 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 PANTHER PTHR10314:SF3 15 401 5.2E-237 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 Gene3D G3DSA:3.40.50.1100 107 185 1.7E-22 T 22-04-2016 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 388 1.2E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 401 53.222 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 PIRSF PIRSF001413 6 405 2.2E-162 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 PANTHER PTHR10314 15 401 5.2E-237 T 22-04-2016 AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 SUPERFAMILY SSF53686 11 399 5.37E-149 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS01630 1db05f2bcb6fbe5959d766c39dd55408 405 Gene3D G3DSA:3.40.50.1100 186 404 5.4E-95 T 22-04-2016 AMK58_RS04965 db9b368af936cabcf860c50a1bc4b6e1 141 Gene3D G3DSA:1.20.1290.10 13 133 2.2E-28 T 22-04-2016 IPR029032 AhpD-like AMK58_RS04965 db9b368af936cabcf860c50a1bc4b6e1 141 SUPERFAMILY SSF69118 13 133 1.7E-29 T 22-04-2016 IPR029032 AhpD-like AMK58_RS04965 db9b368af936cabcf860c50a1bc4b6e1 141 PANTHER PTHR33570:SF2 52 137 5.7E-19 T 22-04-2016 AMK58_RS04965 db9b368af936cabcf860c50a1bc4b6e1 141 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 124 4.6E-17 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS04965 db9b368af936cabcf860c50a1bc4b6e1 141 PANTHER PTHR33570 52 137 5.7E-19 T 22-04-2016 AMK58_RS01675 1a9fda40a5cd07288ee0aef914ca374e 229 Gene3D G3DSA:3.30.1130.10 92 220 4.0E-35 T 22-04-2016 AMK58_RS01675 1a9fda40a5cd07288ee0aef914ca374e 229 Gene3D G3DSA:1.10.286.10 11 83 1.3E-11 T 22-04-2016 AMK58_RS01675 1a9fda40a5cd07288ee0aef914ca374e 229 SUPERFAMILY SSF55620 32 220 1.93E-52 T 22-04-2016 AMK58_RS01675 1a9fda40a5cd07288ee0aef914ca374e 229 Pfam PF01227 GTP cyclohydrolase I 41 220 8.4E-46 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01675 1a9fda40a5cd07288ee0aef914ca374e 229 PANTHER PTHR11109 62 219 4.4E-31 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 SUPERFAMILY SSF48029 122 329 1.57E-61 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Pfam PF14841 FliG middle domain 122 194 6.9E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 SUPERFAMILY SSF48029 8 121 2.22E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Gene3D G3DSA:1.10.220.30 110 194 1.9E-24 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Gene3D G3DSA:1.10.220.30 14 76 1.4E-13 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PANTHER PTHR30534 1 338 1.1E-89 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 336 9.5E-79 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Pfam PF14842 FliG N-terminal domain 12 113 6.0E-27 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PIRSF PIRSF003161 6 339 2.6E-111 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PANTHER PTHR30534:SF0 1 338 1.1E-89 T 22-04-2016 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Gene3D G3DSA:1.10.220.30 201 336 2.2E-41 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 Pfam PF01706 FliG C-terminal domain 223 329 2.9E-39 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS12000 8329cdfc0af48052b2c0004606f00854 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 120 143 3.2E-61 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:1.10.287.130 563 633 5.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:3.30.450.20 56 138 7.4E-5 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF47384 553 638 5.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:3.30.565.10 641 789 4.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF55785 183 293 2.3E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00388 570 638 1.3E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 PANTHER PTHR24423 174 310 3.6E-63 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 PANTHER PTHR24423 434 791 3.6E-63 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Pfam PF00512 His Kinase A (phospho-acceptor) domain 571 638 4.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF55785 420 537 9.6E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF55874 627 787 6.02E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF55785 291 361 4.01E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Pfam PF12860 PAS fold 442 554 1.2E-9 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Pfam PF12860 PAS fold 313 426 1.6E-11 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SUPERFAMILY SSF55785 53 167 8.57E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:3.30.450.20 439 549 3.6E-8 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:3.30.450.20 183 293 5.2E-6 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Gene3D G3DSA:3.30.450.20 302 422 1.1E-6 T 22-04-2016 AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Pfam PF13188 PAS domain 190 220 0.16 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00091 64 125 7.4 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00091 307 377 38.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00091 188 256 6.5 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00091 436 507 5.3 T 22-04-2016 IPR000014 PAS domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 684 786 2.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01615 937c6e7068c0595a41ca4bcc0cc99dfa 794 SMART SM00387 684 787 2.7E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03835 a9bf0e03b18d216d56cd51c44f47e6f7 121 SUPERFAMILY SSF52172 1 120 1.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03835 a9bf0e03b18d216d56cd51c44f47e6f7 121 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-37 T 22-04-2016 AMK58_RS03835 a9bf0e03b18d216d56cd51c44f47e6f7 121 PANTHER PTHR26402 1 121 2.1E-42 T 22-04-2016 AMK58_RS03835 a9bf0e03b18d216d56cd51c44f47e6f7 121 Pfam PF00072 Response regulator receiver domain 3 116 6.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03835 a9bf0e03b18d216d56cd51c44f47e6f7 121 SMART SM00448 1 115 1.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06715 a7b4da54b3cc5b4ce27c126eb1a5c33c 268 PANTHER PTHR11941 2 265 5.2E-120 T 22-04-2016 AMK58_RS06715 a7b4da54b3cc5b4ce27c126eb1a5c33c 268 PANTHER PTHR11941:SF28 2 265 5.2E-120 T 22-04-2016 AMK58_RS06715 a7b4da54b3cc5b4ce27c126eb1a5c33c 268 Gene3D G3DSA:3.90.226.10 14 265 1.1E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS06715 a7b4da54b3cc5b4ce27c126eb1a5c33c 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 267 4.4E-60 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS06715 a7b4da54b3cc5b4ce27c126eb1a5c33c 268 SUPERFAMILY SSF52096 15 267 2.75E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS02835 0694c703b4146b6a11f0215a2a08a999 170 SUPERFAMILY SSF46689 22 139 5.73E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02835 0694c703b4146b6a11f0215a2a08a999 170 Pfam PF13592 Winged helix-turn helix 111 164 6.1E-16 T 22-04-2016 IPR025959 Winged helix-turn helix domain AMK58_RS02835 0694c703b4146b6a11f0215a2a08a999 170 Pfam PF13518 Helix-turn-helix domain 31 82 1.0E-11 T 22-04-2016 AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 Pfam PF00571 CBS domain 76 130 8.6E-15 T 22-04-2016 IPR000644 CBS domain AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 Pfam PF00571 CBS domain 13 64 1.7E-7 T 22-04-2016 IPR000644 CBS domain AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 PANTHER PTHR11911 1 128 5.9E-23 T 22-04-2016 AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 Gene3D G3DSA:3.10.580.10 1 130 1.3E-28 T 22-04-2016 AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 SMART SM00116 13 65 7.3E-4 T 22-04-2016 IPR000644 CBS domain AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 SMART SM00116 83 130 5.2E-12 T 22-04-2016 IPR000644 CBS domain AMK58_RS06890 b734c71317beae5a97a187ce0eadf64d 151 SUPERFAMILY SSF54631 1 131 1.21E-28 T 22-04-2016 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 Pfam PF00072 Response regulator receiver domain 7 109 8.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 PANTHER PTHR24421 5 346 1.1E-123 T 22-04-2016 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 PANTHER PTHR24421:SF21 5 346 1.1E-123 T 22-04-2016 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 SUPERFAMILY SSF52172 4 110 1.41E-28 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 SUPERFAMILY SSF52738 157 343 2.22E-65 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 38.225 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 Gene3D G3DSA:3.40.50.180 156 343 1.5E-73 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 Gene3D G3DSA:3.40.50.2300 3 110 6.0E-30 T 22-04-2016 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 PIRSF PIRSF000876 2 348 1.9E-128 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 SMART SM00448 5 120 3.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02380 31a1eea38231590cb5e221d379305cc7 354 Pfam PF01339 CheB methylesterase 161 338 1.2E-55 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 Pfam PF00183 Hsp90 protein 217 628 9.1E-117 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 25 47 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 124 146 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 4 24 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 92 109 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 192 210 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 74 91 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PRINTS PR00775 90kDa heat shock protein signature 174 191 6.1E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PIRSF PIRSF002583 1 629 1.6E-213 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 625 31.251 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PANTHER PTHR11528:SF44 4 628 5.0E-296 T 22-04-2016 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 SUPERFAMILY SSF54211 224 478 1.82E-91 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 SUPERFAMILY SSF110942 506 625 5.75E-29 T 22-04-2016 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 SMART SM00387 26 186 2.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 PANTHER PTHR11528 4 628 5.0E-296 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 Gene3D G3DSA:3.30.565.10 4 231 1.2E-82 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 184 1.7E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01170 6e63ea8c240c894a9ce4e0076b3fc33b 629 SUPERFAMILY SSF55874 4 214 1.96E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 Gene3D G3DSA:1.10.357.10 61 174 8.7E-32 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 PANTHER PTHR30055:SF34 1 173 5.4E-53 T 22-04-2016 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 SUPERFAMILY SSF48498 72 173 5.4E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 ProSitePatterns PS01081 TetR-type HTH domain signature. 18 48 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 Gene3D G3DSA:1.10.10.60 1 58 2.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 5.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 5.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 SUPERFAMILY SSF46689 2 64 4.62E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 4.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS27960 2d086f4db928ffbbbe1e3ac8a797d4de 174 PANTHER PTHR30055 1 173 5.4E-53 T 22-04-2016 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 150 1.3E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PANTHER PTHR22573 7 540 7.0E-255 T 22-04-2016 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 SUPERFAMILY SSF53738 278 414 6.28E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PANTHER PTHR22573:SF2 7 540 7.0E-255 T 22-04-2016 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Gene3D G3DSA:3.40.120.10 6 195 1.8E-59 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 2.7E-15 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 442 503 1.8E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Gene3D G3DSA:3.40.120.10 196 282 1.5E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 SUPERFAMILY SSF53738 183 291 1.65E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 SUPERFAMILY SSF55957 409 543 6.28E-42 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 SUPERFAMILY SSF53738 5 212 1.61E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Gene3D G3DSA:3.40.120.10 283 400 2.8E-43 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 3.2E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 3.2E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 3.2E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 3.2E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 407 2.5E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS12985 4cd4d4f51857978beb90b02bdd7e392b 543 Gene3D G3DSA:3.30.310.50 401 543 1.8E-54 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 Gene3D G3DSA:1.10.3720.10 63 254 1.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 Gene3D G3DSA:1.10.3720.10 386 574 2.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 PANTHER PTHR30151:SF10 379 586 3.1E-160 T 22-04-2016 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 PANTHER PTHR30151:SF10 67 225 3.1E-160 T 22-04-2016 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 PANTHER PTHR30151 379 586 3.1E-160 T 22-04-2016 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 PANTHER PTHR30151 67 225 3.1E-160 T 22-04-2016 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 SUPERFAMILY SSF161098 63 258 1.31E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 402 570 2.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 255 1.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03635 416ddb71b7d60921d0d01d2464dc4ad6 588 SUPERFAMILY SSF161098 384 573 1.14E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SUPERFAMILY SSF55785 2 100 8.55E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423 392 424 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SMART SM00091 243 311 3.6E-4 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SMART SM00091 104 170 40.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423:SF445 220 375 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423:SF445 392 424 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423:SF445 442 541 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Gene3D G3DSA:3.30.450.20 2 90 1.5E-8 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SUPERFAMILY SSF47384 391 460 1.84E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SMART SM00086 318 360 0.0013 T 22-04-2016 IPR001610 PAC motif AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SMART SM00086 52 92 5.5 T 22-04-2016 IPR001610 PAC motif AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Gene3D G3DSA:3.30.450.20 93 226 2.9E-13 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Gene3D G3DSA:1.10.287.130 391 470 2.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Gene3D G3DSA:3.30.565.10 480 553 1.4E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423 220 375 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 PANTHER PTHR24423 442 541 5.0E-44 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Pfam PF08447 PAS fold 268 353 2.8E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Gene3D G3DSA:3.30.450.20 227 378 8.9E-26 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 99 1.1E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 241 366 1.3E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SUPERFAMILY SSF55785 228 358 3.14E-21 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SUPERFAMILY SSF55785 88 148 3.49E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Pfam PF13426 PAS domain 4 90 3.1E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 Pfam PF12860 PAS fold 111 235 1.5E-20 T 22-04-2016 AMK58_RS19485 5f7c4fa761a6a79742bc4e7a0b6a0b1b 554 SUPERFAMILY SSF55874 471 546 4.42E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 Pfam PF00005 ABC transporter 27 168 1.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 SUPERFAMILY SSF52540 11 237 2.88E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 SMART SM00382 36 217 7.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 PANTHER PTHR24220 13 232 4.9E-93 T 22-04-2016 AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 PANTHER PTHR24220:SF469 13 232 4.9E-93 T 22-04-2016 AMK58_RS07490 5b3f1241c7f934ecb2840262de4ad2a5 240 Gene3D G3DSA:3.40.50.300 9 237 1.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 267 306 4.6E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 29 63 4.6E-6 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 172 199 0.0031 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 133 170 5.6E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 76 114 4.8E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 Pfam PF00805 Pentapeptide repeats (8 copies) 337 372 2.8E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 PANTHER PTHR14136:SF0 278 364 7.3E-36 T 22-04-2016 AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 PANTHER PTHR14136:SF0 29 217 7.3E-36 T 22-04-2016 AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 SUPERFAMILY SSF141571 241 372 1.22E-26 T 22-04-2016 AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 PANTHER PTHR14136 278 364 7.3E-36 T 22-04-2016 AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 PANTHER PTHR14136 29 217 7.3E-36 T 22-04-2016 AMK58_RS08830 184a2849aee21bba0396ee5c0f8063f5 493 SUPERFAMILY SSF141571 23 200 3.24E-39 T 22-04-2016 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 PANTHER PTHR11766 7 415 2.2E-180 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 Gene3D G3DSA:3.40.50.620 5 238 1.0E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 Pfam PF00579 tRNA synthetases class I (W and Y) 33 327 2.6E-73 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 415 6.4E-110 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 SUPERFAMILY SSF52374 5 326 9.64E-99 T 22-04-2016 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 416 42.949 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 Gene3D G3DSA:3.10.290.10 321 416 7.5E-26 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 SUPERFAMILY SSF55174 310 415 1.45E-13 T 22-04-2016 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 1.8E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 1.8E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 1.8E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 1.8E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK58_RS04890 b0892a8ab8382e7ff236efb77b11dcef 417 Gene3D G3DSA:1.10.240.10 239 320 4.7E-36 T 22-04-2016 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 2.0E-14 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 2.0E-14 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.0E-14 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 2.0E-14 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 Pfam PF00459 Inositol monophosphatase family 8 257 4.0E-52 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 Gene3D G3DSA:3.30.540.10 9 155 7.5E-44 T 22-04-2016 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PANTHER PTHR20854:SF38 1 258 7.0E-109 T 22-04-2016 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 Gene3D G3DSA:3.40.190.80 156 259 1.6E-19 T 22-04-2016 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 SUPERFAMILY SSF56655 8 258 2.62E-71 T 22-04-2016 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 11 258 3.4E-91 T 22-04-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK58_RS11925 32f7bad1c1c23afe8ce7dae5efd40f03 260 PANTHER PTHR20854 1 258 7.0E-109 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 Gene3D G3DSA:3.40.50.300 21 253 2.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 PANTHER PTHR24220:SF581 26 257 6.0E-119 T 22-04-2016 AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 PANTHER PTHR24220 26 257 6.0E-119 T 22-04-2016 AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 Pfam PF00005 ABC transporter 42 186 3.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 SUPERFAMILY SSF52540 18 245 3.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01125 992ab6322d3f250d4612ba43b4d59265 272 SMART SM00382 49 242 1.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 Gene3D G3DSA:3.40.50.300 1 111 1.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 SUPERFAMILY SSF52540 1 111 1.05E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 PANTHER PTHR24220:SF336 1 114 6.0E-70 T 22-04-2016 AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 Pfam PF00005 ABC transporter 2 31 1.2E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 83 115 2.0E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS28065 26973c52098be76751d6c357d3bdfbae 139 PANTHER PTHR24220 1 114 6.0E-70 T 22-04-2016 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SMART SM00382 491 658 3.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SMART SM00382 210 356 7.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Gene3D G3DSA:1.10.1780.10 1 141 7.6E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SUPERFAMILY SSF81923 1 141 1.44E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SMART SM01086 657 746 8.6E-38 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Gene3D G3DSA:1.10.8.60 355 439 4.5E-28 T 22-04-2016 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Gene3D G3DSA:3.40.50.300 172 354 1.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Gene3D G3DSA:1.10.8.60 669 755 4.4E-32 T 22-04-2016 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SUPERFAMILY SSF52540 171 427 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 4.2E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 SUPERFAMILY SSF52540 441 742 1.89E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Gene3D G3DSA:3.40.50.300 447 668 6.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 5.5E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 5.5E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 5.5E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 5.5E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 3.5E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PANTHER PTHR11638 1 767 0.0 T 22-04-2016 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 346 1.1E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS04255 8d59e8cdd83bafe3c3477d7476976817 771 PANTHER PTHR11638:SF111 1 767 0.0 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Pfam PF14450 Cell division protein FtsA 19 201 2.8E-9 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Pfam PF14450 Cell division protein FtsA 213 383 6.5E-23 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 SMART SM00842 18 202 3.8E-84 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.90.640.10 241 306 8.3E-21 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 SUPERFAMILY SSF53067 205 386 1.0E-43 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 PIRSF PIRSF003101 8 414 5.6E-133 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 PANTHER PTHR32432 6 391 1.7E-116 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 18 386 1.2E-113 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 PANTHER PTHR32432:SF4 6 391 1.7E-116 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 SUPERFAMILY SSF53067 17 203 7.38E-53 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Pfam PF02491 SHS2 domain inserted in FTSA 97 168 7.3E-23 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.30.420.40 8 91 5.8E-19 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.30.420.40 174 215 5.8E-19 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.30.1490.110 103 171 2.6E-13 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 14 420 26.594 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.30.420.40 216 240 1.6E-23 T 22-04-2016 AMK58_RS03895 6fcfe45deae8e0466129cc26e80bc259 420 Gene3D G3DSA:3.30.420.40 307 361 1.6E-23 T 22-04-2016 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 PANTHER PTHR11360:SF3 11 407 2.6E-89 T 22-04-2016 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 Gene3D G3DSA:1.20.1250.20 15 195 2.1E-24 T 22-04-2016 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 Pfam PF07690 Major Facilitator Superfamily 24 272 1.0E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 Gene3D G3DSA:1.20.1250.20 221 416 3.1E-17 T 22-04-2016 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 PANTHER PTHR11360 11 407 2.6E-89 T 22-04-2016 AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 SUPERFAMILY SSF103473 11 414 1.09E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06960 abd6fa7a36e79c0ce463516398e3c03c 432 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 15 417 9.4E-197 T 22-04-2016 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 Gene3D G3DSA:3.40.190.10 92 195 6.0E-38 T 22-04-2016 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 290 5.9E-113 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 SUPERFAMILY SSF46785 1 111 2.33E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 PANTHER PTHR30579:SF2 1 293 4.8E-104 T 22-04-2016 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 2.4E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 Pfam PF03466 LysR substrate binding domain 93 278 1.1E-19 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 SUPERFAMILY SSF53850 85 277 1.36E-23 T 22-04-2016 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 PANTHER PTHR30579 1 293 4.8E-104 T 22-04-2016 AMK58_RS00575 485241374f66a55ca5ebc5b8175b4a9d 294 Gene3D G3DSA:1.10.10.10 2 79 9.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 7.6E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 7.6E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 7.6E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 Gene3D G3DSA:1.20.20.10 6 73 2.3E-21 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 SUPERFAMILY SSF81333 5 74 5.89E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 Pfam PF00137 ATP synthase subunit C 9 71 2.9E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 14.917 T 22-04-2016 AMK58_RS04385 c369c1ed9637efd98ea2989baa096878 74 PANTHER PTHR10031 4 74 4.7E-24 T 22-04-2016 AMK58_RS23735 0199387fadb16d6d842523a2f822ad46 67 SUPERFAMILY SSF52172 1 48 1.99E-9 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS23735 0199387fadb16d6d842523a2f822ad46 67 PANTHER PTHR24421:SF21 1 67 2.4E-25 T 22-04-2016 AMK58_RS23735 0199387fadb16d6d842523a2f822ad46 67 Pfam PF00072 Response regulator receiver domain 1 47 1.0E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS23735 0199387fadb16d6d842523a2f822ad46 67 PANTHER PTHR24421 1 67 2.4E-25 T 22-04-2016 AMK58_RS23735 0199387fadb16d6d842523a2f822ad46 67 Gene3D G3DSA:3.40.50.2300 1 48 9.0E-10 T 22-04-2016 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 60 788 1.2E-247 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 PANTHER PTHR12815:SF11 42 788 1.3E-196 T 22-04-2016 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF07244 Surface antigen variable number repeat 382 451 5.3E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF07244 Surface antigen variable number repeat 60 125 9.6E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF07244 Surface antigen variable number repeat 298 377 1.6E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF07244 Surface antigen variable number repeat 209 295 1.0E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF07244 Surface antigen variable number repeat 128 204 1.8E-15 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Pfam PF01103 Surface antigen 480 788 1.5E-80 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 PIRSF PIRSF006076 4 788 2.5E-259 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Gene3D G3DSA:2.40.160.50 416 788 8.8E-23 T 22-04-2016 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 PANTHER PTHR12815 42 788 1.3E-196 T 22-04-2016 AMK58_RS06305 ca08c618b175baf34fc01efc61afb7b6 788 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 54 788 24.705 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK58_RS03665 66aec19cf997e0276bf4d7c7858a26b7 138 SUPERFAMILY SSF47819 63 133 2.62E-12 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMK58_RS03665 66aec19cf997e0276bf4d7c7858a26b7 138 Pfam PF00570 HRDC domain 67 129 1.3E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK58_RS03665 66aec19cf997e0276bf4d7c7858a26b7 138 Gene3D G3DSA:1.10.150.80 69 130 7.7E-5 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 311 3.9E-132 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PIRSF PIRSF000102 1 321 1.7E-109 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 5.0E-44 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 SUPERFAMILY SSF56327 144 312 5.19E-58 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 42.363 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 SUPERFAMILY SSF51735 5 144 6.64E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 314 2.1E-31 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 Gene3D G3DSA:3.90.110.10 145 314 3.6E-64 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 Gene3D G3DSA:3.40.50.720 2 144 2.8E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PANTHER PTHR11540:SF16 1 319 1.5E-154 T 22-04-2016 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.5E-31 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.5E-31 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.5E-31 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 1.5E-31 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.5E-31 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS02575 c9ff18a3fe6f4b4d57cc857892f4cbd9 322 PANTHER PTHR11540 1 319 1.5E-154 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 Gene3D G3DSA:3.30.160.20 23 86 1.5E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 SUPERFAMILY SSF54211 94 173 8.34E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 Pfam PF00333 Ribosomal protein S5, N-terminal domain 25 89 2.4E-27 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 SUPERFAMILY SSF54768 22 90 2.3E-22 T 22-04-2016 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 178 35.966 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 23 177 1.6E-63 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 ProSitePatterns PS00585 Ribosomal protein S5 signature. 42 74 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 Gene3D G3DSA:3.30.230.10 90 174 9.7E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 PANTHER PTHR13718 13 174 2.3E-66 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10320 e392964dd33011e76cb14ec34213ebb1 193 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 172 1.4E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Gene3D G3DSA:1.10.730.10 645 790 1.0E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Gene3D G3DSA:3.40.50.620 2 221 2.1E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Gene3D G3DSA:3.40.50.620 427 577 2.1E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Gene3D G3DSA:3.40.50.620 615 644 2.1E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 SUPERFAMILY SSF47323 659 856 1.2E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946 615 856 0.0 T 22-04-2016 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946 239 578 0.0 T 22-04-2016 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946 1 205 0.0 T 22-04-2016 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 SUPERFAMILY SSF52374 418 665 1.52E-149 T 22-04-2016 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 SUPERFAMILY SSF52374 3 225 1.52E-149 T 22-04-2016 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 405 7.9E-68 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 1.4E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Pfam PF08264 Anticodon-binding domain of tRNA 701 818 3.9E-19 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Gene3D G3DSA:3.90.740.10 222 426 6.7E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 856 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946:SF7 615 856 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946:SF7 239 578 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 PANTHER PTHR11946:SF7 1 205 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 856 23.025 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 SUPERFAMILY SSF50677 225 417 3.87E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 615 655 1.3E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 576 8.8E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00330 8cd6262dde5f4084947bbcd8e4905799 856 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 170 3.9E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SMART SM00387 618 724 5.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SUPERFAMILY SSF47384 494 575 3.92E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SUPERFAMILY SSF55874 563 723 4.32E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 723 5.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SMART SM01079 75 276 6.3E-19 T 22-04-2016 IPR006189 CHASE domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 724 3.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 707 3.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 682 3.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 668 3.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Pfam PF00512 His Kinase A (phospho-acceptor) domain 509 574 8.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PANTHER PTHR24423 376 723 2.4E-79 T 22-04-2016 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PANTHER PTHR24423 30 46 2.4E-79 T 22-04-2016 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 496 4.8E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PANTHER PTHR24423:SF439 376 723 2.4E-79 T 22-04-2016 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 PANTHER PTHR24423:SF439 30 46 2.4E-79 T 22-04-2016 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Gene3D G3DSA:1.10.287.130 502 569 5.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Gene3D G3DSA:3.30.565.10 576 724 5.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SMART SM00388 509 574 4.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 SUPERFAMILY SSF55785 366 487 2.09E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Pfam PF03924 CHASE domain 80 264 5.6E-28 T 22-04-2016 IPR006189 CHASE domain AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Pfam PF08448 PAS fold 384 488 4.0E-13 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS03745 cb892a1f89f5cd714797416595052c5c 724 Gene3D G3DSA:3.30.450.20 370 488 7.5E-18 T 22-04-2016 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 SUPERFAMILY SSF52518 369 564 3.13E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 SUPERFAMILY SSF52518 3 186 2.02E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 SUPERFAMILY SSF52467 161 349 2.5E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Gene3D G3DSA:3.40.50.1220 186 358 1.4E-49 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 PANTHER PTHR18968 1 583 0.0 T 22-04-2016 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 6.8E-34 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 587 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 PANTHER PTHR18968:SF14 1 583 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 172 4.0E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Gene3D G3DSA:3.40.50.970 362 575 5.8E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Gene3D G3DSA:3.40.50.970 3 182 4.9E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06980 4c090789cd82caa5bfa85fae261ad602 589 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 4.4E-35 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK58_RS03450 b033bde46fc1471873d8025e7558fb9d 135 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 82 3.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS03450 b033bde46fc1471873d8025e7558fb9d 135 SUPERFAMILY SSF46785 11 101 2.36E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03450 b033bde46fc1471873d8025e7558fb9d 135 Gene3D G3DSA:1.10.10.10 4 116 3.3E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03450 b033bde46fc1471873d8025e7558fb9d 135 PANTHER PTHR30432 16 110 3.8E-19 T 22-04-2016 AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 PANTHER PTHR30465:SF2 1 289 2.0E-104 T 22-04-2016 AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 1 30 7.5E-6 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 Gene3D G3DSA:1.10.3720.10 68 285 7.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 SUPERFAMILY SSF161098 69 269 1.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 287 1.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12080 cc9d4d5045910dd582dec309c7b851d5 291 PANTHER PTHR30465 1 289 2.0E-104 T 22-04-2016 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 428 522 6.4E-26 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 Gene3D G3DSA:3.30.420.10 422 523 4.9E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 SMART SM00479 428 523 1.4E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 Pfam PF13188 PAS domain 43 82 3.7E-4 T 22-04-2016 IPR000014 PAS domain AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 PANTHER PTHR30231 391 522 6.4E-40 T 22-04-2016 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 SUPERFAMILY SSF55785 35 139 4.0E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 Gene3D G3DSA:3.30.450.20 35 166 2.0E-7 T 22-04-2016 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 SUPERFAMILY SSF53098 422 522 3.58E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 Pfam PF00929 Exonuclease 430 522 5.3E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS16165 ce5f4050ace2c4aa1374e50fe93d6a17 523 SMART SM00091 42 108 0.0011 T 22-04-2016 IPR000014 PAS domain AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 Pfam PF01037 Lrp/AsnC ligand binding domain 72 138 1.2E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 SUPERFAMILY SSF54909 61 148 2.28E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 PANTHER PTHR30154 1 150 4.9E-49 T 22-04-2016 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.2E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.5E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.5E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.5E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 SUPERFAMILY SSF46785 1 60 8.83E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 SMART SM00344 1 108 2.2E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 Gene3D G3DSA:1.10.10.10 2 52 9.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08695 cacafb3cc54fdc8d7d8dffc7cf270e3e 151 Gene3D G3DSA:3.30.70.920 54 135 4.9E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 SUPERFAMILY SSF51556 483 569 2.82E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 SUPERFAMILY SSF51556 131 434 2.82E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 3.5E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 3.5E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 3.5E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 3.5E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Gene3D G3DSA:2.30.40.10 70 145 4.2E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 4.5E-55 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PANTHER PTHR22642:SF7 25 298 1.3E-267 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PANTHER PTHR22642:SF7 322 503 1.3E-267 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 ProSitePatterns PS00145 Urease active site. 319 335 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 SUPERFAMILY SSF51338 427 479 8.92E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PANTHER PTHR22642 25 298 1.3E-267 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 PANTHER PTHR22642 322 503 1.3E-267 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Pfam PF01979 Amidohydrolase family 127 455 1.1E-83 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 1.8E-300 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 SUPERFAMILY SSF51338 4 179 7.0E-62 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Gene3D G3DSA:3.20.20.140 146 431 9.9E-214 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Gene3D G3DSA:3.20.20.140 490 567 9.9E-214 T 22-04-2016 AMK58_RS07085 70c7e7d1e1b61db18a6c103c1f4e831f 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 57.737 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS10290 7552202dfe3cc229b2355cb42ed6f03e 284 Pfam PF00892 EamA-like transporter family 146 279 5.7E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS10290 7552202dfe3cc229b2355cb42ed6f03e 284 Pfam PF00892 EamA-like transporter family 2 133 3.3E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS10290 7552202dfe3cc229b2355cb42ed6f03e 284 SUPERFAMILY SSF103481 183 283 1.57E-12 T 22-04-2016 AMK58_RS10290 7552202dfe3cc229b2355cb42ed6f03e 284 SUPERFAMILY SSF103481 31 137 5.62E-15 T 22-04-2016 AMK58_RS10290 7552202dfe3cc229b2355cb42ed6f03e 284 PANTHER PTHR22911 1 284 4.6E-41 T 22-04-2016 AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 Pfam PF00106 short chain dehydrogenase 8 200 2.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 Gene3D G3DSA:3.40.50.720 1 233 4.8E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 SUPERFAMILY SSF51735 1 224 3.78E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PANTHER PTHR24322:SF513 157 188 2.6E-46 T 22-04-2016 AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PANTHER PTHR24322:SF513 11 141 2.6E-46 T 22-04-2016 AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PANTHER PTHR24322 157 188 2.6E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07320 ca9174d296bd7dc93236d376903e952a 236 PANTHER PTHR24322 11 141 2.6E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 402 1.2E-203 T 22-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 PANTHER PTHR13693 2 402 1.6E-232 T 22-04-2016 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 SUPERFAMILY SSF53383 3 399 3.09E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 Gene3D G3DSA:3.90.1150.10 282 394 8.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 Gene3D G3DSA:3.40.640.10 65 281 4.0E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 PANTHER PTHR13693:SF57 2 402 1.6E-232 T 22-04-2016 AMK58_RS12145 a1db936f9770a3a18a4348b6d013fcc4 404 Pfam PF00155 Aminotransferase class I and II 47 391 1.9E-80 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 PANTHER PTHR11808:SF36 8 402 5.2E-181 T 22-04-2016 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 Gene3D G3DSA:3.90.1150.10 267 401 1.5E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 399 2.1E-126 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 Gene3D G3DSA:3.40.640.10 17 265 2.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 SUPERFAMILY SSF53383 37 400 1.61E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 PIRSF PIRSF001434 3 402 2.0E-120 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 PANTHER PTHR11808 8 402 5.2E-181 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS13855 13c47278fe4ae412715d5a1f229b3053 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 399 3.7E-162 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 PANTHER PTHR11808:SF36 8 402 5.2E-181 T 22-04-2016 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 Gene3D G3DSA:3.90.1150.10 267 401 1.5E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 399 2.1E-126 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 Gene3D G3DSA:3.40.640.10 17 265 2.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 SUPERFAMILY SSF53383 37 400 1.61E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 PIRSF PIRSF001434 3 402 2.0E-120 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 PANTHER PTHR11808 8 402 5.2E-181 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS00040 13c47278fe4ae412715d5a1f229b3053 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 399 3.7E-162 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 SUPERFAMILY SSF53335 199 271 1.49E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 SUPERFAMILY SSF53335 46 161 1.49E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 PANTHER PTHR10108 51 199 1.1E-13 T 22-04-2016 AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 PANTHER PTHR10108 225 309 1.1E-13 T 22-04-2016 AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 Gene3D G3DSA:3.40.50.150 230 258 3.6E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 Gene3D G3DSA:3.40.50.150 45 188 3.6E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01325 3b9dffec1744bce93d6e37b2b599b1a5 412 Pfam PF08242 Methyltransferase domain 58 158 2.1E-13 T 22-04-2016 IPR013217 Methyltransferase type 12 AMK58_RS13775 c4946f5b57258f43c69acad5b6285436 121 SMART SM00448 3 116 8.8E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13775 c4946f5b57258f43c69acad5b6285436 121 SUPERFAMILY SSF52172 3 120 6.12E-37 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS13775 c4946f5b57258f43c69acad5b6285436 121 Gene3D G3DSA:3.40.50.2300 3 120 1.8E-37 T 22-04-2016 AMK58_RS13775 c4946f5b57258f43c69acad5b6285436 121 Pfam PF00072 Response regulator receiver domain 5 116 9.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13775 c4946f5b57258f43c69acad5b6285436 121 PANTHER PTHR26402 3 119 2.2E-39 T 22-04-2016 AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 SUPERFAMILY SSF52833 3 113 2.15E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 Pfam PF03960 ArsC family 61 112 2.8E-12 T 22-04-2016 IPR006660 Arsenate reductase-like AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 Gene3D G3DSA:3.40.30.10 1 113 4.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 PANTHER PTHR30041:SF4 1 113 1.9E-42 T 22-04-2016 AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 113 7.0E-40 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AMK58_RS09890 1c354e5b37bdc811b0343471f8936f5e 113 PANTHER PTHR30041 1 113 1.9E-42 T 22-04-2016 AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 PANTHER PTHR18964 13 307 3.3E-88 T 22-04-2016 AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 ProSitePatterns PS01125 ROK family signature. 141 168 - T 22-04-2016 IPR000600 ROK family AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 SUPERFAMILY SSF53067 13 308 2.59E-61 T 22-04-2016 AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 Gene3D G3DSA:3.30.420.40 145 288 5.1E-52 T 22-04-2016 AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 Gene3D G3DSA:3.30.420.40 12 144 2.7E-34 T 22-04-2016 AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 Pfam PF00480 ROK family 13 308 5.9E-74 T 22-04-2016 IPR000600 ROK family AMK58_RS07240 16cb7dc1eab3286eebd28cae22cf6632 322 PANTHER PTHR18964:SF134 13 307 3.3E-88 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Pfam PF00679 Elongation factor G C-terminus 618 704 1.1E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SMART SM00889 498 616 1.3E-61 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Hamap MF_00054_B Elongation factor G [fusA]. 6 709 97.025 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115:SF66 3 182 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115:SF66 274 302 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115:SF66 322 709 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Gene3D G3DSA:3.40.50.300 6 306 1.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SUPERFAMILY SSF52540 7 300 4.07E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SUPERFAMILY SSF54980 621 707 1.63E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Pfam PF14492 Elongation Factor G, domain II 422 495 3.7E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SUPERFAMILY SSF54980 420 498 1.29E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Gene3D G3DSA:2.40.30.10 324 422 4.2E-33 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SUPERFAMILY SSF54211 497 617 4.3E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Gene3D G3DSA:3.30.70.240 616 706 8.3E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Gene3D G3DSA:3.30.70.870 423 498 6.4E-32 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115 3 182 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115 274 302 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PANTHER PTHR23115 322 709 4.0E-301 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.4E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.4E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SUPERFAMILY SSF50447 284 422 2.52E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Pfam PF03764 Elongation factor G, domain IV 497 615 2.5E-42 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Pfam PF00009 Elongation factor Tu GTP binding domain 9 300 1.3E-63 T 22-04-2016 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Pfam PF03144 Elongation factor Tu domain 2 342 409 1.9E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 SMART SM00838 618 705 6.2E-51 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 709 2.4E-288 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 185 1.4E-30 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 Gene3D G3DSA:3.30.230.10 502 615 9.6E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS09765 285078bcb0cf19a1cb53aff89601440b 714 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS10310 94949cceba09430d7609cf465c532307 161 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 150 6.3E-44 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10310 94949cceba09430d7609cf465c532307 161 SUPERFAMILY SSF52080 5 151 2.49E-41 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P AMK58_RS10310 94949cceba09430d7609cf465c532307 161 Gene3D G3DSA:3.100.10.10 33 156 3.1E-25 T 22-04-2016 AMK58_RS10310 94949cceba09430d7609cf465c532307 161 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 153 20.224 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMK58_RS10310 94949cceba09430d7609cf465c532307 161 PANTHER PTHR12934 3 152 1.9E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10310 94949cceba09430d7609cf465c532307 161 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 151 3.9E-34 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 SUPERFAMILY SSF51735 1 122 3.68E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 SMART SM00881 4 100 8.8E-38 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PIRSF PIRSF001553 1 291 6.9E-132 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 Gene3D G3DSA:3.40.50.261 120 288 1.0E-73 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 Pfam PF00549 CoA-ligase 151 265 4.0E-18 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 Gene3D G3DSA:3.40.50.720 3 119 1.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 SUPERFAMILY SSF52210 123 288 6.02E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 Pfam PF02629 CoA binding domain 6 99 2.9E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PANTHER PTHR11117 1 290 3.9E-198 T 22-04-2016 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 5.7E-139 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS06935 3fa6fb5fe99e95a7a78918ae0b751e42 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 12 341 5.8E-110 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 320 4.5E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 27 38 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 PANTHER PTHR22960 12 292 1.1E-109 T 22-04-2016 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 Pfam PF04055 Radical SAM superfamily 25 186 1.4E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 SUPERFAMILY SSF102114 11 286 6.93E-80 T 22-04-2016 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 Gene3D G3DSA:3.20.20.70 11 317 8.4E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 SMART SM00729 21 229 3.6E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 12 341 39.545 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS03710 fc0c5be5d04afe412bac4278aa385f38 341 Pfam PF13353 4Fe-4S single cluster domain 28 130 1.1E-8 T 22-04-2016 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 Gene3D G3DSA:1.10.1050.10 1 95 1.7E-34 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 6.2E-75 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 PANTHER PTHR11831 1 204 2.3E-70 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 PANTHER PTHR11831:SF4 1 204 2.3E-70 T 22-04-2016 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 32.966 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 Gene3D G3DSA:3.10.290.10 96 193 9.3E-30 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 SMART SM00363 93 157 2.7E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 SMART SM01390 3 92 2.4E-40 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 92 7.8E-23 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 SUPERFAMILY SSF55174 7 204 2.62E-62 T 22-04-2016 AMK58_RS11500 f4271baa4f249a20e3931cf7391d6ba8 204 Pfam PF01479 S4 domain 93 140 3.3E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 711 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 736 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 697 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 755 5.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF00512 His Kinase A (phospho-acceptor) domain 528 593 7.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:1.10.287.130 533 589 2.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:3.40.50.2300 768 823 4.5E-4 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF00072 Response regulator receiver domain 949 1068 4.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:3.40.50.2300 949 1074 7.5E-38 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:1.20.120.160 1091 1201 4.0E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PANTHER PTHR24423 396 783 4.1E-174 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PANTHER PTHR24423 946 1108 4.1E-174 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PANTHER PTHR24423:SF382 396 783 4.1E-174 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 PANTHER PTHR24423:SF382 946 1108 4.1E-174 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF01627 Hpt domain 1114 1194 4.7E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SMART SM00388 528 593 6.5E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SMART SM00091 398 463 0.0077 T 22-04-2016 IPR000014 PAS domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 640 756 2.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:3.30.565.10 594 756 7.4E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF08448 PAS fold 404 510 4.5E-6 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 395 515 9.4E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF55874 582 755 6.94E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF47226 1094 1191 3.4E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF47226 1051 1064 3.4E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Gene3D G3DSA:3.30.450.20 396 532 1.8E-14 T 22-04-2016 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF55785 387 506 6.47E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF47384 513 594 1.92E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SUPERFAMILY SSF52172 946 1073 2.99E-34 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SMART SM00448 947 1068 3.6E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 SMART SM00387 640 758 2.8E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01620 8877ca9464a72a2365d6c40f2ec871aa 1207 Pfam PF00672 HAMP domain 321 387 5.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 SUPERFAMILY SSF52440 1 113 2.23E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Gene3D G3DSA:3.30.1490.20 130 202 9.9E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Gene3D G3DSA:3.40.50.20 1 129 1.1E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 4.9E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 SMART SM00878 335 440 4.0E-59 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 PANTHER PTHR18866 1 443 5.9E-284 T 22-04-2016 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.7E-46 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.2E-216 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 SUPERFAMILY SSF51246 330 443 3.19E-40 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.6E-80 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 Gene3D G3DSA:3.30.470.20 205 443 2.1E-93 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS04230 267142c8d4db1d6dd313073c3d073bc8 447 SUPERFAMILY SSF56059 83 345 4.24E-71 T 22-04-2016 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 PANTHER PTHR11751:SF306 14 401 2.7E-174 T 22-04-2016 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 Gene3D G3DSA:3.40.640.10 45 275 2.5E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 Gene3D G3DSA:3.90.1150.10 276 400 1.1E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 Pfam PF00155 Aminotransferase class I and II 32 392 2.7E-78 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 SUPERFAMILY SSF53383 1 398 1.15E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 PANTHER PTHR11751 14 401 2.7E-174 T 22-04-2016 AMK58_RS03295 170ee102df5ce8143824ee23c1b1b143 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK58_RS07600 d12d834a6652e02dc29e7806aea68a8d 252 SUPERFAMILY SSF53300 29 233 1.27E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS07600 d12d834a6652e02dc29e7806aea68a8d 252 Pfam PF06707 Protein of unknown function (DUF1194) 30 236 1.8E-76 T 22-04-2016 IPR010607 Protein of unknown function DUF1194 AMK58_RS07600 d12d834a6652e02dc29e7806aea68a8d 252 Gene3D G3DSA:3.40.50.410 32 181 1.1E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 261 1.2E-58 T 22-04-2016 AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 PANTHER PTHR22748:SF7 1 264 6.4E-86 T 22-04-2016 AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 PANTHER PTHR22748 1 264 6.4E-86 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 Gene3D G3DSA:3.60.10.10 1 262 1.0E-67 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 262 3.5E-56 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 255 7.4E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 SUPERFAMILY SSF56219 1 263 1.02E-69 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS00185 caca3e8c56378439c5dd045ef1c5967c 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 548 741 1.8E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 Pfam PF00672 HAMP domain 305 370 1.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 Gene3D G3DSA:1.10.287.950 514 714 4.1E-57 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SMART SM00283 495 742 2.2E-99 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089 296 357 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089 477 745 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089 165 241 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SMART SM00304 322 375 1.5E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SMART SM00304 442 494 0.07 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 593 620 2.4E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 670 699 2.4E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 516 545 2.4E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 622 651 2.4E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089:SF63 296 357 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089:SF63 477 745 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 PANTHER PTHR32089:SF63 165 241 1.5E-126 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SMART SM01358 42 293 2.9E-31 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SUPERFAMILY SSF158472 322 370 1.7E-10 T 22-04-2016 AMK58_RS04195 30c34a49bc31ed035a5f8f223c000971 811 SUPERFAMILY SSF58104 462 743 2.62E-72 T 22-04-2016 AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 PANTHER PTHR23150 221 360 2.3E-23 T 22-04-2016 AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 PANTHER PTHR23150 143 204 2.3E-23 T 22-04-2016 AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 PANTHER PTHR23150:SF19 143 204 2.3E-23 T 22-04-2016 AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 PANTHER PTHR23150:SF19 221 360 2.3E-23 T 22-04-2016 AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 Pfam PF03781 Sulfatase-modifying factor enzyme 1 113 323 2.8E-30 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 SUPERFAMILY SSF56436 111 324 8.95E-34 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS03225 f53f0de0e21ef2213b153bcf3b9af617 529 Gene3D G3DSA:3.90.1580.10 63 330 2.3E-32 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 11 512 2.7E-170 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Gene3D G3DSA:3.40.50.300 175 343 5.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 232 8.3E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 472 491 8.3E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 310 337 8.3E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 258 8.3E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 276 290 8.3E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PANTHER PTHR30050 177 514 3.6E-195 T 22-04-2016 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PANTHER PTHR30050 6 107 3.6E-195 T 22-04-2016 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 SMART SM00382 211 339 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 SUPERFAMILY SSF52540 178 391 2.27E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 ProSitePatterns PS01008 DnaA protein signature. 472 491 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Pfam PF11638 DnaA N-terminal domain 9 70 2.8E-20 T 22-04-2016 IPR024633 DnaA N-terminal domain AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 SUPERFAMILY SSF48295 409 513 3.14E-39 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Gene3D G3DSA:1.10.1750.10 413 513 4.7E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 8 513 32.516 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PANTHER PTHR30050:SF2 177 514 3.6E-195 T 22-04-2016 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 PANTHER PTHR30050:SF2 6 107 3.6E-195 T 22-04-2016 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Gene3D G3DSA:1.10.8.60 346 412 1.9E-25 T 22-04-2016 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 423 491 4.5E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 Pfam PF00308 Bacterial dnaA protein 179 395 4.2E-91 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA AMK58_RS00910 6e3e90b862a7ef22583ada201056cf39 514 SMART SM00760 422 491 8.7E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 Gene3D G3DSA:1.20.120.220 77 247 1.0E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 SUPERFAMILY SSF81336 77 240 7.19E-46 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PRINTS PR00123 ATP synthase A subunit signature 85 101 1.5E-29 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PRINTS PR00123 ATP synthase A subunit signature 166 188 1.5E-29 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PRINTS PR00123 ATP synthase A subunit signature 146 161 1.5E-29 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PRINTS PR00123 ATP synthase A subunit signature 227 242 1.5E-29 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 247 16.244 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 Pfam PF00119 ATP synthase A chain 30 240 1.3E-53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PANTHER PTHR11410:SF6 1 247 4.1E-102 T 22-04-2016 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 4 243 1.4E-67 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 ProSitePatterns PS00449 ATP synthase a subunit signature. 169 178 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site AMK58_RS04390 539bb842b6ee67bf16b3842f70c50920 247 PANTHER PTHR11410 1 247 4.1E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 Gene3D G3DSA:3.40.50.300 18 186 1.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 PANTHER PTHR11603 1 321 7.5E-134 T 22-04-2016 AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 2.2E-61 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 SUPERFAMILY SSF52540 6 297 3.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 Gene3D G3DSA:1.10.8.300 205 319 1.2E-39 T 22-04-2016 AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 PANTHER PTHR11603:SF148 1 321 7.5E-134 T 22-04-2016 AMK58_RS03135 97028d05fb1857af3ee9e4ff9b960a0d 323 PIRSF PIRSF002849 2 323 3.8E-127 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 20 265 5.3E-98 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 Gene3D G3DSA:3.40.50.1580 3 266 4.5E-96 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 PANTHER PTHR11904 5 273 6.3E-114 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 PANTHER PTHR11904:SF9 5 273 6.3E-114 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 263 1.3E-88 T 22-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 PIRSF PIRSF000477 1 269 2.7E-102 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 SUPERFAMILY SSF53167 4 267 1.95E-85 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS05605 e56bdf0e41941d5655504fe8440b1d28 277 Pfam PF01048 Phosphorylase superfamily 20 266 6.4E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.30.565.10 566 723 1.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 487 1.5E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.40.50.2300 925 1045 7.8E-41 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF47384 485 566 9.02E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PANTHER PTHR24423:SF486 359 731 5.8E-191 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PANTHER PTHR24423:SF486 807 1043 5.8E-191 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.40.50.2300 760 895 2.0E-25 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 565 4.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:1.20.120.160 1069 1176 4.4E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SMART SM00091 361 427 5.5E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF52172 924 1050 1.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SMART SM00388 500 565 3.9E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.30.450.20 360 477 5.8E-28 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.30.450.20 181 295 1.0E-4 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF55785 372 489 4.04E-25 T 22-04-2016 IPR000014 PAS domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Pfam PF00072 Response regulator receiver domain 763 884 2.9E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Pfam PF00072 Response regulator receiver domain 927 1039 1.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF55874 554 723 6.02E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 612 725 1.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF47226 1022 1035 4.84E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF47226 1072 1172 4.84E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:1.10.287.130 495 561 4.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Pfam PF00989 PAS fold 362 477 3.1E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 725 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 681 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 667 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 706 1.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 Gene3D G3DSA:3.30.450.20 103 180 1.7E-10 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SMART SM00387 612 728 1.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SMART SM00448 761 884 6.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SMART SM00448 924 1039 9.3E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 SUPERFAMILY SSF52172 759 890 7.26E-25 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PANTHER PTHR24423 359 731 5.8E-191 T 22-04-2016 AMK58_RS12700 7fb8502ad199926c3507a4ff2d35c932 1278 PANTHER PTHR24423 807 1043 5.8E-191 T 22-04-2016 AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 PANTHER PTHR22604 50 381 1.0E-159 T 22-04-2016 AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 Gene3D G3DSA:3.30.360.10 159 374 7.2E-41 T 22-04-2016 AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 PANTHER PTHR22604:SF139 50 381 1.0E-159 T 22-04-2016 AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 Gene3D G3DSA:3.40.50.720 49 158 1.5E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 SUPERFAMILY SSF51735 50 173 1.73E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 SUPERFAMILY SSF55347 146 346 2.62E-34 T 22-04-2016 AMK58_RS10630 cdcf10704a734158e3689f8a90996dd6 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 50 135 2.7E-11 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 SUPERFAMILY SSF54862 168 358 2.3E-27 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 SUPERFAMILY SSF54862 100 122 2.3E-27 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Pfam PF12801 4Fe-4S binding domain 91 130 2.8E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 PANTHER PTHR24960:SF45 15 396 2.2E-104 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Pfam PF13746 4Fe-4S dicluster domain 214 321 7.0E-41 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Gene3D G3DSA:3.30.70.20 277 311 4.1E-7 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Gene3D G3DSA:1.10.1060.10 217 276 7.0E-9 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Gene3D G3DSA:2.60.40.10 357 484 3.8E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 484 2.4E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 PANTHER PTHR24960 15 396 2.2E-104 T 22-04-2016 AMK58_RS05780 76d78bbaff772810cd1111d38a082a15 487 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 30 481 1.5E-150 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 Pfam PF00575 S1 RNA binding domain 39 78 1.3E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 SUPERFAMILY SSF50249 192 236 3.65E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 SUPERFAMILY SSF50249 40 81 3.65E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001 1 112 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001 753 991 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001 181 720 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 Hamap MF_00970 Ribonuclease E [rne]. 2 1050 32.779 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001:SF1 1 112 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001:SF1 753 991 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 PANTHER PTHR30001:SF1 181 720 5.7E-246 T 22-04-2016 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 537 1.2E-161 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 Pfam PF10150 Ribonuclease E/G family 232 503 3.1E-96 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 Gene3D G3DSA:2.40.50.140 194 236 1.8E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10735 8eebb753f6ff9fb0e080b219682cf697 1057 Gene3D G3DSA:2.40.50.140 33 83 1.8E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 SUPERFAMILY SSF48179 203 295 6.29E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 293 2.4E-21 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 Gene3D G3DSA:3.40.50.720 256 441 9.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 10 419 5.0E-102 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 SUPERFAMILY SSF51735 9 196 9.42E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 PANTHER PTHR11374 9 446 3.4E-93 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 Gene3D G3DSA:3.40.50.720 8 224 3.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 SUPERFAMILY SSF52413 315 425 3.14E-11 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 321 423 2.0E-13 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 10 178 5.0E-40 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 PIRSF PIRSF000124 9 441 1.8E-63 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 PIRSF PIRSF500136 3 437 5.5E-94 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 SMART SM00984 320 425 3.2E-13 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK58_RS12375 a4021f30d160b0378bca4bad5edf743a 451 PANTHER PTHR11374:SF4 9 446 3.4E-93 T 22-04-2016 AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 SUPERFAMILY SSF56300 187 250 1.28E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 SUPERFAMILY SSF56300 10 131 1.28E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 PANTHER PTHR34990:SF2 1 276 5.1E-129 T 22-04-2016 AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 PANTHER PTHR34990 1 276 5.1E-129 T 22-04-2016 AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 Gene3D G3DSA:3.60.21.10 194 245 1.9E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 Gene3D G3DSA:3.60.21.10 11 144 1.9E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS10830 b936432dcdaff6446c100c0efae8a6e0 281 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 13 225 1.3E-13 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 PANTHER PTHR11695:SF558 18 334 6.7E-117 T 22-04-2016 AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 PANTHER PTHR11695 18 334 6.7E-117 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 3.2E-21 T 22-04-2016 AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 SMART SM00829 13 334 3.6E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 SUPERFAMILY SSF50129 10 147 3.65E-33 T 22-04-2016 IPR011032 GroES-like AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 1.1E-165 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 Gene3D G3DSA:3.40.50.720 160 247 5.3E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 SUPERFAMILY SSF51735 117 286 3.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 Gene3D G3DSA:3.90.180.10 17 159 1.3E-34 T 22-04-2016 IPR011032 GroES-like AMK58_RS05725 a265d27cb18a9a3fbd620a39f39019c7 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 93 4.1E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS08420 bc84ca2bd14d502e1feec4f264f0e0dd 1436 PANTHER PTHR36985 761 1435 6.0E-35 T 22-04-2016 AMK58_RS08420 bc84ca2bd14d502e1feec4f264f0e0dd 1436 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 873 1055 1.9E-4 T 22-04-2016 IPR007452 Translocation and assembly module TamB AMK58_RS08420 bc84ca2bd14d502e1feec4f264f0e0dd 1436 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1081 1436 4.8E-61 T 22-04-2016 IPR007452 Translocation and assembly module TamB AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 PANTHER PTHR23416:SF55 16 243 8.4E-100 T 22-04-2016 AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 168 2.0E-7 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 124 9.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 Gene3D G3DSA:2.160.10.10 75 231 3.6E-38 T 22-04-2016 AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 22 182 1.6E-73 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 SUPERFAMILY SSF51161 4 186 1.66E-57 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 Gene3D G3DSA:1.10.3130.10 10 74 1.2E-24 T 22-04-2016 AMK58_RS04575 eb8c9631c959870a6d587980de538cd1 294 PANTHER PTHR23416 16 243 8.4E-100 T 22-04-2016 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 PIRSF PIRSF002144 1 92 6.5E-34 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.1E-42 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.6E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.6E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.6E-20 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.695 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 Pfam PF00203 Ribosomal protein S19 3 83 2.8E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 SUPERFAMILY SSF54570 3 84 2.49E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 PANTHER PTHR11880 1 92 5.8E-49 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10385 94af2bc12bf6d3fe3dbc998c42d651ed 92 Gene3D G3DSA:3.30.860.10 1 91 1.3E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 Pfam PF01019 Gamma-glutamyltranspeptidase 42 210 1.2E-25 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 119 8.0E-10 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 119 138 8.0E-10 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 49 74 8.0E-10 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 SUPERFAMILY SSF56235 25 329 8.68E-44 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 PANTHER PTHR11686:SF9 29 203 5.8E-35 T 22-04-2016 AMK58_RS10760 32ae0805bbd0cbb6a57d47603e9407f1 429 PANTHER PTHR11686 29 203 5.8E-35 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS03970 2c38758a91a30879cbda7fe229413e65 165 PANTHER PTHR34701 4 154 2.2E-17 T 22-04-2016 AMK58_RS03970 2c38758a91a30879cbda7fe229413e65 165 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 165 28.483 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK58_RS03970 2c38758a91a30879cbda7fe229413e65 165 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 128 1.0E-8 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK58_RS03970 2c38758a91a30879cbda7fe229413e65 165 Pfam PF02381 MraZ protein, putative antitoxin-like 87 134 1.2E-6 T 22-04-2016 IPR020603 MraZ domain AMK58_RS03970 2c38758a91a30879cbda7fe229413e65 165 SUPERFAMILY SSF89447 1 137 5.98E-31 T 22-04-2016 AMK58_RS02050 c690ad1486dd204850d1e6fc6b371781 94 Pfam PF03795 YCII-related domain 1 88 1.6E-22 T 22-04-2016 IPR005545 YCII-related AMK58_RS02050 c690ad1486dd204850d1e6fc6b371781 94 PANTHER PTHR33606 1 90 1.8E-18 T 22-04-2016 AMK58_RS02050 c690ad1486dd204850d1e6fc6b371781 94 Gene3D G3DSA:3.30.70.1060 1 90 2.6E-29 T 22-04-2016 AMK58_RS02050 c690ad1486dd204850d1e6fc6b371781 94 SUPERFAMILY SSF54909 1 90 4.56E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.86 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 Gene3D G3DSA:3.90.80.10 4 173 4.3E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 PANTHER PTHR10286:SF15 1 172 1.2E-71 T 22-04-2016 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 PANTHER PTHR10286 1 172 1.2E-71 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 SUPERFAMILY SSF50324 4 173 3.53E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 Pfam PF00719 Inorganic pyrophosphatase 18 172 5.1E-55 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS00855 e2608712d2a8c73a094466bff05e023a 185 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PANTHER PTHR32089 278 557 1.5E-126 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PANTHER PTHR32089 177 246 1.5E-126 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 166 1.4E-9 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 369 553 1.1E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 SMART SM00283 307 554 6.2E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 1.6E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 1.6E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 1.6E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 1.6E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 1.6E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 SUPERFAMILY SSF58104 241 266 2.88E-56 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 SUPERFAMILY SSF58104 306 553 2.88E-56 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 SMART SM00304 211 264 2.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 Pfam PF00672 HAMP domain 191 259 9.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PANTHER PTHR32089:SF40 278 557 1.5E-126 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 PANTHER PTHR32089:SF40 177 246 1.5E-126 T 22-04-2016 AMK58_RS05280 91b0ae37220604ac57abade051b8e650 560 Gene3D G3DSA:1.10.287.950 311 524 3.8E-42 T 22-04-2016 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 601 621 5.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 584 601 5.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Gene3D G3DSA:1.10.10.60 583 621 4.8E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 SUPERFAMILY SSF52540 204 445 5.05E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Pfam PF02954 Bacterial regulatory protein, Fis family 586 618 8.4E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 SMART SM00382 225 376 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 SMART SM00065 29 181 8.7E-31 T 22-04-2016 IPR003018 GAF domain GO:0005515 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 PANTHER PTHR32071 158 445 9.7E-142 T 22-04-2016 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Pfam PF13185 GAF domain 28 171 1.9E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Pfam PF00158 Sigma-54 interaction domain 206 372 1.1E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 12 462 7.2E-181 T 22-04-2016 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Gene3D G3DSA:1.10.8.60 378 446 3.6E-22 T 22-04-2016 AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Gene3D G3DSA:3.30.450.40 11 182 5.0E-32 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 SUPERFAMILY SSF55781 10 170 2.62E-24 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 Gene3D G3DSA:3.40.50.300 201 376 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04765 b11a44889df2f76424456bc3d8a78ab4 625 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 PANTHER PTHR23407:SF1 1 202 4.2E-41 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 SUPERFAMILY SSF100950 8 200 8.93E-41 T 22-04-2016 AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 194 5.4E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 194 1.2E-24 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 PIRSF PIRSF006806 4 197 1.2E-25 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 Gene3D G3DSA:3.40.50.10420 7 201 2.3E-42 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK58_RS09315 9f0b9c8424bd42b9d49cec14bd3f1a8f 202 PANTHER PTHR23407 1 202 4.2E-41 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 PANTHER PTHR23389 10 560 2.4E-181 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 137 166 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SUPERFAMILY SSF47781 620 708 6.74E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SUPERFAMILY SSF52113 719 793 1.4E-18 T 22-04-2016 IPR001357 BRCT domain AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:1.10.150.20 533 608 4.4E-19 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:1.10.150.20 621 708 1.0E-16 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:3.40.50.10190 718 794 3.3E-25 T 22-04-2016 IPR001357 BRCT domain AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SUPERFAMILY SSF50249 337 421 5.48E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 341 418 2.7E-34 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SMART SM00292 719 795 2.5E-10 T 22-04-2016 IPR001357 BRCT domain AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 427 454 3.6E-11 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SUPERFAMILY SSF47781 423 613 9.64E-48 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 23 338 1.2E-117 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:1.10.150.20 455 528 3.0E-24 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 PANTHER PTHR23389:SF9 10 560 2.4E-181 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SMART SM00532 23 468 1.6E-252 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:3.30.470.30 141 271 4.2E-49 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SUPERFAMILY SSF56091 19 336 1.22E-115 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 721 793 3.6E-12 T 22-04-2016 IPR001357 BRCT domain AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:2.40.50.140 339 411 2.6E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SMART SM00278 539 558 100.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SMART SM00278 582 601 14.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 SMART SM00278 669 688 95.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF12826 Helix-hairpin-helix motif 627 698 2.8E-6 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Pfam PF12826 Helix-hairpin-helix motif 537 607 4.8E-11 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Hamap MF_01588 DNA ligase [ligA]. 22 793 51.541 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 Gene3D G3DSA:1.10.287.610 15 86 3.8E-24 T 22-04-2016 AMK58_RS03875 649936d70a738c6693181c893c7be992 795 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 31 613 3.4E-205 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SMART SM00465 31 112 5.0E-15 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Pfam PF12826 Helix-hairpin-helix motif 576 626 1.1E-6 T 22-04-2016 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SMART SM00278 603 622 0.73 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SMART SM00278 571 590 64.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Gene3D G3DSA:1.10.150.20 571 624 6.0E-21 T 22-04-2016 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SUPERFAMILY SSF46600 205 257 1.96E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Pfam PF01541 GIY-YIG catalytic domain 33 107 1.0E-6 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Hamap MF_00203 UvrABC system protein C [uvrC]. 18 622 27.064 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SUPERFAMILY SSF82771 31 114 2.62E-18 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 PANTHER PTHR30562:SF1 14 623 2.1E-241 T 22-04-2016 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 PANTHER PTHR30562 14 623 2.1E-241 T 22-04-2016 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 397 557 9.4E-52 T 22-04-2016 IPR001162 UvrC family homology region AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Gene3D G3DSA:3.40.1440.10 32 109 9.7E-7 T 22-04-2016 IPR027299 GIY-YIG domain AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 23 601 1.8E-165 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Pfam PF02151 UvrB/uvrC motif 226 250 2.7E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 SUPERFAMILY SSF47781 540 625 9.21E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK58_RS07975 ed568305cf3617dc0ef4731ffdd1a674 627 Gene3D G3DSA:4.10.860.10 197 257 1.9E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 PANTHER PTHR21712:SF4 16 340 1.3E-89 T 22-04-2016 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 Gene3D G3DSA:3.40.50.10210 82 320 1.1E-87 T 22-04-2016 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 25 337 3.7E-119 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 PANTHER PTHR21712 16 340 1.3E-89 T 22-04-2016 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 Pfam PF02277 Phosphoribosyltransferase 22 337 9.6E-116 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 Gene3D G3DSA:1.10.1610.10 12 81 1.6E-29 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 SUPERFAMILY SSF52733 15 338 9.16E-112 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK58_RS12310 e78a1fd532508a074780de7935cce0c9 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 22 339 34.36 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 SUPERFAMILY SSF52540 298 475 5.02E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 SUPERFAMILY SSF52540 39 131 5.02E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 Pfam PF13175 AAA ATPase domain 39 106 4.9E-13 T 22-04-2016 AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 Pfam PF13175 AAA ATPase domain 257 474 3.7E-18 T 22-04-2016 AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 Gene3D G3DSA:3.40.1140.10 39 119 8.5E-12 T 22-04-2016 AMK58_RS02865 8faf854ceed7673c90d508530e85a26f 779 Gene3D G3DSA:3.40.1140.10 390 474 8.5E-12 T 22-04-2016 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PANTHER PTHR33751 1 54 6.8E-75 T 22-04-2016 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PANTHER PTHR33751 74 295 6.8E-75 T 22-04-2016 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PIRSF PIRSF000006 1 295 2.4E-112 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PANTHER PTHR33751:SF1 1 54 6.8E-75 T 22-04-2016 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PANTHER PTHR33751:SF1 74 295 6.8E-75 T 22-04-2016 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 207 288 1.8E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 109 196 7.3E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PRINTS PR00605 Class IC cytochrome C signature 266 288 5.1E-9 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 PRINTS PR00605 Class IC cytochrome C signature 119 130 5.1E-9 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 SUPERFAMILY SSF46626 30 53 3.3E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 SUPERFAMILY SSF46626 89 202 3.3E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 7 294 8.4E-100 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 SUPERFAMILY SSF46626 204 293 8.61E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 11 57 4.9E-25 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Gene3D G3DSA:1.10.760.10 104 203 1.5E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Gene3D G3DSA:1.10.760.10 204 294 1.0E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00995 e381a9b011459b0bf733c4830d9a5ce5 295 Gene3D G3DSA:1.10.760.10 35 57 1.5E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SMART SM00028 4 37 33.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SMART SM00028 38 71 68.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SMART SM00028 173 206 73.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SMART SM00028 106 139 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SMART SM00028 207 240 65.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 Gene3D G3DSA:3.40.50.2000 448 526 2.0E-9 T 22-04-2016 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SUPERFAMILY SSF48452 11 269 7.39E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 Pfam PF13432 Tetratricopeptide repeat 83 139 0.0029 T 22-04-2016 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 Pfam PF13432 Tetratricopeptide repeat 9 72 5.7E-7 T 22-04-2016 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 Gene3D G3DSA:1.25.40.10 3 270 2.5E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 SUPERFAMILY SSF53756 294 529 6.28E-18 T 22-04-2016 AMK58_RS05335 101249ffc807aa3b76a7c904528c8f5a 556 PANTHER PTHR23083 2 266 2.7E-26 T 22-04-2016 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 Gene3D G3DSA:3.40.47.10 160 323 1.4E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 Gene3D G3DSA:3.40.47.10 2 159 6.4E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 3.0E-38 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 190 3.3E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 SUPERFAMILY SSF53901 3 323 1.14E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 323 71.075 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 PANTHER PTHR18919:SF109 28 323 8.1E-130 T 22-04-2016 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 2.8E-128 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK58_RS08260 1472d3048fa099e6c32a7065a31ca6c5 323 PANTHER PTHR18919 28 323 8.1E-130 T 22-04-2016 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Gene3D G3DSA:2.160.10.10 3 190 3.3E-48 T 22-04-2016 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 254 1.4E-22 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 1.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 49 2.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 254 2.8E-104 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Gene3D G3DSA:1.20.1180.10 194 254 6.0E-17 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 PIRSF PIRSF000456 1 261 5.4E-107 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 PANTHER PTHR23416 5 251 1.0E-120 T 22-04-2016 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 PANTHER PTHR23416:SF8 5 251 1.0E-120 T 22-04-2016 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 2 258 43.995 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 SUPERFAMILY SSF51161 3 251 1.6E-73 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 150 178 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS06320 b16cd1011a04ad41b1e221b039c2411f 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 17 45 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Gene3D G3DSA:3.30.450.20 356 464 1.5E-12 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 229 357 2.2E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 761 7.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Pfam PF12860 PAS fold 368 481 5.1E-27 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PANTHER PTHR24423 558 763 3.1E-84 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PANTHER PTHR24423 206 475 3.1E-84 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PANTHER PTHR24423 497 541 3.1E-84 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00091 362 429 1.3 T 22-04-2016 IPR000014 PAS domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00091 233 301 0.0055 T 22-04-2016 IPR000014 PAS domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Pfam PF08447 PAS fold 257 344 6.2E-20 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00086 442 477 440.0 T 22-04-2016 IPR001610 PAC motif AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00086 308 350 2.6E-7 T 22-04-2016 IPR001610 PAC motif AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00304 174 226 4.1E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Gene3D G3DSA:3.30.450.20 219 355 2.1E-34 T 22-04-2016 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SUPERFAMILY SSF55785 346 463 1.19E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SUPERFAMILY SSF55874 587 762 3.01E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Gene3D G3DSA:3.30.565.10 596 762 1.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 708 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 729 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SUPERFAMILY SSF55785 243 353 5.58E-20 T 22-04-2016 IPR000014 PAS domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 SMART SM00387 639 762 2.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02320 77475630868f0cd86d6a535fcf5e73b3 778 Pfam PF00672 HAMP domain 154 222 8.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 SUPERFAMILY SSF46785 2 85 3.38E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 Gene3D G3DSA:3.40.190.10 178 262 5.8E-20 T 22-04-2016 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 SUPERFAMILY SSF53850 92 296 1.99E-39 T 22-04-2016 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 Gene3D G3DSA:1.10.10.10 3 85 1.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 Pfam PF03466 LysR substrate binding domain 90 294 6.0E-41 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 PANTHER PTHR30537:SF26 1 298 4.9E-104 T 22-04-2016 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 Gene3D G3DSA:3.40.190.10 94 177 2.9E-34 T 22-04-2016 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01440 53ea1ce751fd7299c38c2def7d5c795a 298 PANTHER PTHR30537 1 298 4.9E-104 T 22-04-2016 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 PANTHER PTHR11645:SF0 15 275 3.1E-78 T 22-04-2016 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 168 273 8.0E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 SUPERFAMILY SSF51735 11 165 2.86E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 PANTHER PTHR11645 15 275 3.1E-78 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 Gene3D G3DSA:1.10.3730.10 167 273 1.7E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 9 273 25.03 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 PIRSF PIRSF000193 9 275 1.0E-56 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 13 273 1.6E-72 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 SUPERFAMILY SSF48179 167 274 1.39E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 13 104 5.5E-7 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMK58_RS05215 f8f6786ce124f433fcf692ce199124c6 275 Gene3D G3DSA:3.40.50.720 10 165 2.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Gene3D G3DSA:3.40.50.920 543 669 7.5E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 SUPERFAMILY SSF52922 540 669 3.93E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Gene3D G3DSA:3.40.50.970 14 320 1.3E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 322 4.5E-137 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 ProSitePatterns PS00802 Transketolase signature 2. 472 488 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 SUPERFAMILY SSF52518 14 320 7.07E-114 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Gene3D G3DSA:3.40.50.970 334 535 1.0E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 668 2.9E-250 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 SUPERFAMILY SSF52518 345 531 1.07E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 SMART SM00861 358 530 4.0E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 PANTHER PTHR11624 344 670 0.0 T 22-04-2016 IPR033247 Transketolase family AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 PANTHER PTHR11624 13 316 0.0 T 22-04-2016 IPR033247 Transketolase family AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Pfam PF02779 Transketolase, pyrimidine binding domain 359 529 6.3E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 Pfam PF02780 Transketolase, C-terminal domain 546 662 7.8E-13 T 22-04-2016 IPR033248 Transketolase, C-terminal domain AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 ProSitePatterns PS00801 Transketolase signature 1. 21 41 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 PANTHER PTHR11624:SF1 344 670 0.0 T 22-04-2016 AMK58_RS09335 63bee1df31733a403fcf93ce9e3546d8 670 PANTHER PTHR11624:SF1 13 316 0.0 T 22-04-2016 AMK58_RS06185 62f95718f1788974d2ba28e8c2eadf86 482 PANTHER PTHR22773 1 476 3.1E-173 T 22-04-2016 AMK58_RS06185 62f95718f1788974d2ba28e8c2eadf86 482 Pfam PF00361 Proton-conducting membrane transporter 124 418 1.3E-85 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK58_RS06185 62f95718f1788974d2ba28e8c2eadf86 482 PANTHER PTHR22773:SF41 1 476 3.1E-173 T 22-04-2016 AMK58_RS06185 62f95718f1788974d2ba28e8c2eadf86 482 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 469 18.714 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK58_RS06185 62f95718f1788974d2ba28e8c2eadf86 482 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 468 9.2E-153 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 PANTHER PTHR10986:SF12 2 123 3.9E-62 T 22-04-2016 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 3.0E-19 T 22-04-2016 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 3.2E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 Gene3D G3DSA:1.10.1900.20 55 117 1.6E-30 T 22-04-2016 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 Pfam PF00453 Ribosomal protein L20 3 109 2.7E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.761 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 SUPERFAMILY SSF74731 3 117 1.7E-49 T 22-04-2016 AMK58_RS01260 09c4982b862db399eeb644b317c0e971 123 PANTHER PTHR10986 2 123 3.9E-62 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK58_RS02955 65516abbebe5b14706bfdef42461b81f 145 Gene3D G3DSA:2.30.30.240 55 115 2.1E-5 T 22-04-2016 AMK58_RS02955 65516abbebe5b14706bfdef42461b81f 145 Pfam PF05239 PRC-barrel domain 55 123 4.0E-7 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS02955 65516abbebe5b14706bfdef42461b81f 145 SUPERFAMILY SSF50346 54 137 3.77E-9 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS09730 be2e1673e4f29dd78d0645107c91f29c 196 Gene3D G3DSA:3.40.50.300 7 195 1.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09730 be2e1673e4f29dd78d0645107c91f29c 196 SUPERFAMILY SSF52540 5 194 3.52E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09730 be2e1673e4f29dd78d0645107c91f29c 196 Pfam PF00005 ABC transporter 12 143 2.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS09730 be2e1673e4f29dd78d0645107c91f29c 196 SMART SM00382 21 192 4.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS09730 be2e1673e4f29dd78d0645107c91f29c 196 PANTHER PTHR24220 3 195 6.3E-43 T 22-04-2016 AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 PANTHER PTHR39323 4 205 2.1E-37 T 22-04-2016 AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 Gene3D G3DSA:3.60.21.10 27 130 1.2E-9 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 PANTHER PTHR39323:SF1 4 205 2.1E-37 T 22-04-2016 AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 Pfam PF00149 Calcineurin-like phosphoesterase 26 122 4.4E-5 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 6 214 6.0E-68 T 22-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 SUPERFAMILY SSF56300 26 129 1.77E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS09040 874e88ce14d6b3b8463a88acf1ea40a3 227 PIRSF PIRSF000887 5 222 6.2E-49 T 22-04-2016 IPR024173 Phosphoesterase, MJ0037 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 PANTHER PTHR39321 13 168 3.9E-27 T 22-04-2016 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 16 204 20.279 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 SUPERFAMILY SSF52374 16 204 2.94E-38 T 22-04-2016 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 20 203 2.9E-34 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 Pfam PF01467 Cytidylyltransferase-like 20 200 2.1E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK58_RS11715 934b769bfdbf2da39ffd7124ae653bd6 205 Gene3D G3DSA:3.40.50.620 17 204 5.8E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 443 614 35.853 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Gene3D G3DSA:2.40.30.10 221 331 1.4E-22 T 22-04-2016 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PANTHER PTHR11055 422 612 1.5E-103 T 22-04-2016 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Gene3D G3DSA:3.40.50.300 423 610 2.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Gene3D G3DSA:3.40.50.300 10 216 6.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Pfam PF00009 Elongation factor Tu GTP binding domain 12 206 4.9E-44 T 22-04-2016 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 431 608 5.2E-69 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 63 78 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Gene3D G3DSA:2.40.30.10 332 416 1.0E-5 T 22-04-2016 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 SUPERFAMILY SSF52540 9 234 4.27E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 SUPERFAMILY SSF50447 219 307 6.03E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 SUPERFAMILY SSF50465 313 412 4.27E-18 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.89E-18 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PRINTS PR00315 GTP-binding elongation factor signature 90 100 1.89E-18 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PRINTS PR00315 GTP-binding elongation factor signature 143 152 1.89E-18 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PRINTS PR00315 GTP-binding elongation factor signature 106 117 1.89E-18 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 PRINTS PR00315 GTP-binding elongation factor signature 70 78 1.89E-18 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 403 2.7E-107 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 SUPERFAMILY SSF52540 442 611 1.89E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08190 1193e2e8f4cba0c3b7ef8f60282977e7 624 Pfam PF01583 Adenylylsulphate kinase 445 595 1.4E-63 T 22-04-2016 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Pfam PF08264 Anticodon-binding domain of tRNA 613 759 2.2E-38 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 SUPERFAMILY SSF52374 345 581 1.53E-139 T 22-04-2016 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 SUPERFAMILY SSF52374 5 194 1.53E-139 T 22-04-2016 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Gene3D G3DSA:1.10.287.380 812 879 1.0E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Gene3D G3DSA:3.40.50.620 345 569 1.8E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Gene3D G3DSA:3.40.50.620 6 195 1.8E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 884 16.113 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PRINTS PR00986 Valyl-tRNA synthetase signature 452 473 3.1E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PRINTS PR00986 Valyl-tRNA synthetase signature 483 501 3.1E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 3.1E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 3.1E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 3.1E-38 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PANTHER PTHR11946:SF5 815 882 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Gene3D G3DSA:1.10.730.10 572 752 8.7E-61 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Gene3D G3DSA:3.90.740.10 196 341 1.5E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 819 883 9.3E-20 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PANTHER PTHR11946 4 796 0.0 T 22-04-2016 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 TIGRFAM TIGR00422 valS: valine--tRNA ligase 5 863 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 SUPERFAMILY SSF46589 819 883 2.98E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 SUPERFAMILY SSF50677 193 346 2.49E-63 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 SUPERFAMILY SSF47323 584 834 2.06E-58 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PANTHER PTHR11946:SF5 4 796 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 570 8.7E-213 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07765 07039d8e1edb2a52f6fb7e4c2da11797 885 PANTHER PTHR11946 815 882 0.0 T 22-04-2016 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Gene3D G3DSA:3.40.50.300 4 233 2.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 SUPERFAMILY SSF52540 4 243 1.5E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Gene3D G3DSA:2.40.50.100 341 350 1.4E-7 T 22-04-2016 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Gene3D G3DSA:2.40.50.100 239 281 1.4E-7 T 22-04-2016 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Gene3D G3DSA:2.40.50.140 282 339 3.4E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 PANTHER PTHR24220 5 245 2.7E-161 T 22-04-2016 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Pfam PF08402 TOBE domain 277 347 2.0E-10 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 Pfam PF00005 ABC transporter 20 161 2.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 SMART SM00382 28 211 6.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 PANTHER PTHR24220:SF151 5 245 2.7E-161 T 22-04-2016 AMK58_RS02270 a1500ce44f5bea21563325c455462898 357 SUPERFAMILY SSF50331 236 355 7.05E-29 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 PANTHER PTHR21581:SF3 74 310 1.3E-62 T 22-04-2016 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 Pfam PF05036 Sporulation related domain 375 452 1.2E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 168 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 178 191 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 98 109 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 PANTHER PTHR21581 74 310 1.3E-62 T 22-04-2016 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 Gene3D G3DSA:3.40.710.10 55 309 6.5E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 71 291 9.6E-57 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK58_RS04285 911ad4c4a492a24cbfa273cebfc4de12 459 SUPERFAMILY SSF56601 51 309 2.64E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 103 222 2.5E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 6.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 6.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 SUPERFAMILY SSF46689 21 101 1.44E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 SUPERFAMILY SSF48498 99 224 2.25E-35 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 Gene3D G3DSA:1.10.10.60 20 79 1.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 PANTHER PTHR30328 5 224 1.7E-55 T 22-04-2016 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 PANTHER PTHR30328:SF16 5 224 1.7E-55 T 22-04-2016 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 79 4.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS10655 b8ebcb1e91afe25bbd21475b6058c8c5 225 Gene3D G3DSA:1.10.357.10 80 220 9.9E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 Pfam PF05787 Bacterial protein of unknown function (DUF839) 87 626 3.7E-189 T 22-04-2016 IPR008557 Protein of unknown function DUF839 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 SUPERFAMILY SSF63829 546 629 5.49E-9 T 22-04-2016 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 SUPERFAMILY SSF63829 329 405 5.49E-9 T 22-04-2016 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 SUPERFAMILY SSF63829 459 508 5.49E-9 T 22-04-2016 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 PANTHER PTHR35399:SF2 25 677 1.2E-185 T 22-04-2016 AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 Gene3D G3DSA:2.120.10.30 524 622 4.7E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 Gene3D G3DSA:2.120.10.30 337 483 4.7E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK58_RS09055 61d3fcff0d40c5d859168f29b398c446 677 PANTHER PTHR35399 25 677 1.2E-185 T 22-04-2016 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 32.444 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 PANTHER PTHR10746 1 205 3.2E-89 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 2.2E-70 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 Gene3D G3DSA:3.40.1370.10 57 206 6.6E-56 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 3.0E-62 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMK58_RS10400 88c7abb18392758ea57cd2a5e30a6f83 206 SUPERFAMILY SSF52166 1 205 2.09E-69 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK58_RS05730 386da444fac7cccafa657721450e3f59 120 SUPERFAMILY SSF46785 13 111 1.57E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05730 386da444fac7cccafa657721450e3f59 120 PANTHER PTHR33204:SF5 14 107 1.2E-50 T 22-04-2016 AMK58_RS05730 386da444fac7cccafa657721450e3f59 120 PANTHER PTHR33204 14 107 1.2E-50 T 22-04-2016 AMK58_RS05730 386da444fac7cccafa657721450e3f59 120 Pfam PF01638 HxlR-like helix-turn-helix 23 111 2.5E-37 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK58_RS05730 386da444fac7cccafa657721450e3f59 120 Gene3D G3DSA:1.10.10.10 11 110 5.4E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS27800 b61b7d577206c1442ae4bc67c9353b71 91 Pfam PF13701 Transposase DDE domain group 1 48 90 4.7E-11 T 22-04-2016 IPR025668 Transposase DDE domain AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 Pfam PF07690 Major Facilitator Superfamily 30 249 1.2E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 Gene3D G3DSA:1.20.1250.20 27 209 3.3E-30 T 22-04-2016 AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 Gene3D G3DSA:1.20.1250.20 227 398 1.4E-13 T 22-04-2016 AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 PANTHER PTHR23501 13 404 3.7E-136 T 22-04-2016 AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 SUPERFAMILY SSF103473 23 401 5.36E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS08135 e5d01b9b8aba7ec9b39975fd04323c0f 404 PANTHER PTHR23501:SF11 13 404 3.7E-136 T 22-04-2016 AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 Gene3D G3DSA:1.10.10.10 158 229 1.6E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 SMART SM00419 174 221 4.7E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 Gene3D G3DSA:2.60.120.10 16 152 7.0E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 Pfam PF00027 Cyclic nucleotide-binding domain 40 126 7.6E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 SMART SM00100 21 139 1.1E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 SUPERFAMILY SSF51206 16 152 8.25E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 PANTHER PTHR24567 13 230 3.8E-37 T 22-04-2016 AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 Pfam PF13545 Crp-like helix-turn-helix domain 159 228 1.5E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS04530 1d545d2c7c6937737c1515dc2c4a6de8 240 SUPERFAMILY SSF46785 158 230 6.17E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS02850 d6226ca9d3e23ca736034ad930e28e65 105 Pfam PF13586 Transposase DDE domain 20 102 1.9E-19 T 22-04-2016 IPR025668 Transposase DDE domain AMK58_RS02850 d6226ca9d3e23ca736034ad930e28e65 105 PANTHER PTHR30007 1 99 1.4E-21 T 22-04-2016 AMK58_RS02850 d6226ca9d3e23ca736034ad930e28e65 105 PANTHER PTHR30007:SF0 1 99 1.4E-21 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00091 253 321 9.0E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00091 134 201 4.4E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00091 20 86 1.2 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SUPERFAMILY SSF55785 31 130 3.07E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SUPERFAMILY SSF55785 119 246 1.26E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00086 324 364 15.0 T 22-04-2016 IPR001610 PAC motif AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00086 81 122 8.1 T 22-04-2016 IPR001610 PAC motif AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SUPERFAMILY SSF55785 251 345 1.54E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SMART SM00267 364 536 1.5E-62 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Pfam PF13188 PAS domain 24 71 9.2E-4 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 SUPERFAMILY SSF55073 380 538 1.02E-49 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 PANTHER PTHR10799:SF710 258 532 1.8E-25 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Gene3D G3DSA:3.30.450.20 120 246 1.4E-15 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 PANTHER PTHR10799 258 532 1.8E-25 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Gene3D G3DSA:3.30.450.20 15 119 1.8E-9 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 532 6.4E-46 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 372 535 1.3E-51 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Gene3D G3DSA:3.30.450.20 251 344 8.6E-19 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 247 2.5E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 371 4.9E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Pfam PF00989 PAS fold 253 343 1.3E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Gene3D G3DSA:3.30.70.270 377 540 4.7E-55 T 22-04-2016 AMK58_RS08100 0478819d719bbf864e58444f2f78c066 540 Pfam PF08448 PAS fold 140 247 4.9E-10 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 145 1.7E-28 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 SMART SM00859 9 146 3.1E-54 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 321 1.3E-18 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 PANTHER PTHR32338 1 350 3.3E-193 T 22-04-2016 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 SUPERFAMILY SSF55347 154 318 8.92E-54 T 22-04-2016 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 Gene3D G3DSA:3.40.50.720 7 162 8.4E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 SUPERFAMILY SSF51735 6 172 2.36E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 Gene3D G3DSA:3.30.360.10 163 318 1.1E-60 T 22-04-2016 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 8 344 40.807 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 PANTHER PTHR32338:SF8 1 350 3.3E-193 T 22-04-2016 AMK58_RS06735 2c9899bd5c05f5263be1efe7b7b1ae02 350 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 8 350 5.0E-130 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 SMART SM01185 68 122 1.7E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.4E-23 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 43.607 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Gene3D G3DSA:2.40.50.140 66 127 5.1E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 1.2E-70 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 PIRSF PIRSF005901 1 187 1.5E-67 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Gene3D G3DSA:2.40.50.140 129 186 3.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 3.8E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 PANTHER PTHR30053 1 187 4.4E-84 T 22-04-2016 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Gene3D G3DSA:2.30.30.30 4 64 7.3E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 SUPERFAMILY SSF50104 3 64 9.63E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 PANTHER PTHR30053:SF1 1 187 4.4E-84 T 22-04-2016 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 SUPERFAMILY SSF50249 66 127 1.67E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 SUPERFAMILY SSF50249 130 186 7.02E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 SMART SM00841 130 185 2.6E-30 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK58_RS09390 52be01dedc9e8c21dfc2db5195d43b50 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 2.7E-19 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 SUPERFAMILY SSF51419 1 195 3.92E-50 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 Gene3D G3DSA:2.40.37.10 186 242 1.7E-15 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 Pfam PF01168 Alanine racemase, N-terminal domain 1 192 4.8E-50 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PANTHER PTHR30511 1 242 1.7E-51 T 22-04-2016 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 SUPERFAMILY SSF50621 188 242 2.79E-7 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 Gene3D G3DSA:3.20.20.10 1 185 2.7E-55 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 1 11 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PANTHER PTHR30511:SF0 1 242 1.7E-51 T 22-04-2016 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PRINTS PR00992 Alanine racemase signature 94 106 2.2E-18 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PRINTS PR00992 Alanine racemase signature 32 50 2.2E-18 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PRINTS PR00992 Alanine racemase signature 236 242 2.2E-18 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PRINTS PR00992 Alanine racemase signature 128 139 2.2E-18 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS20990 38297be563e79a68711ae09a3ebf039a 242 PRINTS PR00992 Alanine racemase signature 165 192 2.2E-18 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS13335 a1002e4e2497f4d0e4e6ee54d631f5d2 166 Gene3D G3DSA:3.40.50.2020 11 157 5.2E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS13335 a1002e4e2497f4d0e4e6ee54d631f5d2 166 SUPERFAMILY SSF53271 9 152 9.57E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS13335 a1002e4e2497f4d0e4e6ee54d631f5d2 166 PANTHER PTHR39563 8 162 5.7E-66 T 22-04-2016 AMK58_RS13335 a1002e4e2497f4d0e4e6ee54d631f5d2 166 Pfam PF00156 Phosphoribosyl transferase domain 15 155 2.9E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS13335 a1002e4e2497f4d0e4e6ee54d631f5d2 166 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 7 163 42.214 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 AMK58_RS00690 d470cf281669f2f76eb438fad007200d 274 Gene3D G3DSA:3.40.630.30 21 165 3.0E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00690 d470cf281669f2f76eb438fad007200d 274 SUPERFAMILY SSF55729 19 240 5.74E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00690 d470cf281669f2f76eb438fad007200d 274 Pfam PF13444 Acetyltransferase (GNAT) domain 36 143 4.5E-32 T 22-04-2016 AMK58_RS00690 d470cf281669f2f76eb438fad007200d 274 PANTHER PTHR37323 19 264 4.2E-41 T 22-04-2016 AMK58_RS00690 d470cf281669f2f76eb438fad007200d 274 PANTHER PTHR37323:SF1 19 264 4.2E-41 T 22-04-2016 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 Pfam PF00072 Response regulator receiver domain 5 116 4.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 PANTHER PTHR26402 3 120 5.1E-47 T 22-04-2016 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 PANTHER PTHR26402:SF50 3 120 5.1E-47 T 22-04-2016 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 Gene3D G3DSA:3.40.50.2300 2 126 6.8E-43 T 22-04-2016 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 SMART SM00448 3 116 1.6E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02435 f9f9c41b8e87146136e437e86455f682 138 SUPERFAMILY SSF52172 2 121 3.56E-41 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 PANTHER PTHR33603 1 151 5.7E-49 T 22-04-2016 AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 PANTHER PTHR33603:SF1 1 151 5.7E-49 T 22-04-2016 AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 28.102 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 PIRSF PIRSF004505 1 151 2.7E-44 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 3.9E-47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 Gene3D G3DSA:3.40.1280.10 1 151 1.7E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS11725 6448bf3c8282694ac640ac62fc31dd81 152 SUPERFAMILY SSF75217 1 149 4.19E-47 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 102 514 6.0E-4 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 Pfam PF00672 HAMP domain 164 233 1.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 PANTHER PTHR32089 250 529 2.8E-96 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 PANTHER PTHR32089 132 218 2.8E-96 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 SMART SM00283 272 526 3.0E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 SMART SM00304 264 338 57.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 SMART SM00304 183 236 7.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 PANTHER PTHR32089:SF40 250 529 2.8E-96 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 PANTHER PTHR32089:SF40 132 218 2.8E-96 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 SUPERFAMILY SSF58104 211 238 4.19E-55 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 SUPERFAMILY SSF58104 278 525 4.19E-55 T 22-04-2016 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 529 1.4E-30 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS08765 68878298217dfa0b2c602843145b2fcb 532 Gene3D G3DSA:1.10.287.950 300 497 3.5E-43 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 PANTHER PTHR33712:SF7 230 459 2.5E-189 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 Gene3D G3DSA:3.40.50.1980 301 425 5.3E-53 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 44 51 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 SUPERFAMILY SSF53807 2 468 2.62E-161 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 26 449 4.0E-115 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 PANTHER PTHR33712 2 212 2.5E-189 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 PANTHER PTHR33712 230 459 2.5E-189 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 Gene3D G3DSA:3.40.50.1980 26 169 2.8E-53 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 107 121 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 Gene3D G3DSA:3.40.50.1980 174 275 4.6E-36 T 22-04-2016 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 469 3.7E-239 T 22-04-2016 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS18405 d36273c0de7c984cc03958ba06bb31d0 469 PANTHER PTHR33712:SF7 2 212 2.5E-189 T 22-04-2016 AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 SUPERFAMILY SSF52540 322 579 1.86E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 SUPERFAMILY SSF52540 240 288 1.86E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 Gene3D G3DSA:3.40.50.300 221 422 6.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 SMART SM00487 214 447 6.0E-7 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 Gene3D G3DSA:3.40.50.300 456 579 1.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 Gene3D G3DSA:1.10.3210.10 21 104 1.1E-4 T 22-04-2016 IPR006674 HD domain AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 SUPERFAMILY SSF109604 164 176 7.85E-7 T 22-04-2016 AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 SUPERFAMILY SSF109604 21 107 7.85E-7 T 22-04-2016 AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 21 177 9.4E-26 T 22-04-2016 IPR006483 CRISPR-associated Cas3-HD domain AMK58_RS11270 56291a1fb1b827fb21eddb0468e607d9 771 Pfam PF00270 DEAD/DEAH box helicase 242 414 1.8E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 130 187 1.3E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 296 372 1.3E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.90.1170.50 5 129 5.7E-44 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 PANTHER PTHR11908:SF85 6 588 0.0 T 22-04-2016 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 PANTHER PTHR11908:SF85 605 793 0.0 T 22-04-2016 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 157 723 4.7E-181 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 188 294 8.4E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 467 638 1.8E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 639 788 5.4E-70 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Gene3D G3DSA:3.30.365.10 375 466 5.4E-70 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 SMART SM01008 21 141 2.0E-58 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 SUPERFAMILY SSF54665 5 163 8.24E-49 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 SUPERFAMILY SSF56003 133 788 3.53E-211 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 PANTHER PTHR11908 6 588 0.0 T 22-04-2016 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 PANTHER PTHR11908 605 793 0.0 T 22-04-2016 AMK58_RS07565 137508d9a54ad91a8762ecbd0183f544 796 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 141 2.0E-30 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 Gene3D G3DSA:1.10.10.10 3 150 1.5E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 PANTHER PTHR33221 3 163 1.6E-46 T 22-04-2016 AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 PANTHER PTHR33221:SF6 3 163 1.6E-46 T 22-04-2016 AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 Pfam PF02082 Transcriptional regulator 4 83 1.3E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 140 1.8E-30 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 SUPERFAMILY SSF46785 8 140 7.29E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04650 662ae512659caeaaa8ffc47abdc87db2 176 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PANTHER PTHR30612 4 507 0.0 T 22-04-2016 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PANTHER PTHR30612 543 916 0.0 T 22-04-2016 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 170 190 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 400 413 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 363 380 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 101 115 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 326 348 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 63 87 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 PRINTS PR00906 SecA protein signature 117 127 9.1E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF52540 7 228 1.77E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF52540 355 402 1.77E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Pfam PF07516 SecA Wing and Scaffold domain 611 821 1.6E-67 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Gene3D G3DSA:3.40.50.300 356 403 1.1E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Gene3D G3DSA:3.40.50.300 5 228 1.1E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 824 20.27 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF81767 227 355 5.36E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Pfam PF02810 SEC-C motif 896 914 1.8E-9 T 22-04-2016 IPR004027 SEC-C motif AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Gene3D G3DSA:1.10.3060.10 641 823 1.2E-58 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Pfam PF07517 SecA DEAD-like domain 7 388 4.8E-133 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Gene3D G3DSA:3.90.1440.10 231 355 9.1E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Gene3D G3DSA:3.40.50.300 404 611 1.5E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SMART SM00958 228 345 5.3E-73 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 ProSitePatterns PS01312 SecA family signature. 487 502 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 809 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 Pfam PF01043 SecA preprotein cross-linking domain 232 345 7.4E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SMART SM00957 6 389 1.4E-301 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF52540 403 611 8.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF81886 892 904 4.05E-80 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK58_RS12880 ad2c0474dfdbb55aba6c08a22761ec1f 916 SUPERFAMILY SSF81886 613 832 4.05E-80 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 SUPERFAMILY SSF88697 11 200 1.47E-50 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Hamap MF_01973 Lon protease [lon]. 10 772 72.206 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 7.0E-55 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 7.0E-55 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 7.0E-55 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 7.0E-55 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 7.0E-55 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 200 8.0E-43 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PIRSF PIRSF001174 2 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 2.2E-20 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Gene3D G3DSA:1.10.8.60 500 584 7.7E-31 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Gene3D G3DSA:3.30.230.10 592 771 4.5E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 TIGRFAM TIGR00763 lon: endopeptidase La 11 771 4.0E-303 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Gene3D G3DSA:3.40.50.300 310 499 1.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 SUPERFAMILY SSF52540 313 586 1.14E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.7E-98 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PANTHER PTHR10046 11 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 SUPERFAMILY SSF54211 595 771 1.29E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 PANTHER PTHR10046:SF43 11 776 0.0 T 22-04-2016 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 SMART SM00464 9 201 7.7E-87 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 SMART SM00382 347 504 7.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06100 1dd6beca8ffb5635a5b955f20c647cc2 804 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 SUPERFAMILY SSF56176 24 208 3.02E-41 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Gene3D G3DSA:3.30.43.10 17 87 1.9E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 200 299 3.5E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Gene3D G3DSA:3.90.78.10 229 301 2.1E-31 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Gene3D G3DSA:3.30.465.10 92 228 1.3E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Pfam PF01565 FAD binding domain 38 164 5.2E-17 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 PANTHER PTHR21071:SF4 2 307 4.7E-104 T 22-04-2016 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 299 2.9E-53 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 PANTHER PTHR21071 2 307 4.7E-104 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 SUPERFAMILY SSF56194 196 301 7.59E-37 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03910 d13a4e04f7b0c8354dd84756f54a584d 308 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 308 94.323 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 PANTHER PTHR10655:SF33 66 194 1.4E-14 T 22-04-2016 AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 PANTHER PTHR10655 66 194 1.4E-14 T 22-04-2016 AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 68 253 1.1E-42 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 SUPERFAMILY SSF53474 61 258 3.85E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 SUPERFAMILY SSF53474 286 326 3.85E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 Gene3D G3DSA:3.40.50.1820 36 331 1.5E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08520 9cc0b9ff72fe55d82fffeda60d82ae8b 337 Pfam PF10503 Esterase PHB depolymerase 64 262 9.8E-71 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 Gene3D G3DSA:3.20.20.80 165 586 9.4E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 Gene3D G3DSA:2.60.40.10 13 164 6.7E-55 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 Pfam PF00128 Alpha amylase, catalytic domain 201 285 6.2E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 18 106 3.8E-20 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 PANTHER PTHR10357:SF74 609 681 0.0 T 22-04-2016 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 PANTHER PTHR10357:SF74 3 589 0.0 T 22-04-2016 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 14 709 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 PANTHER PTHR10357 609 681 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 PANTHER PTHR10357 3 589 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 SUPERFAMILY SSF51445 148 480 9.39E-142 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 SUPERFAMILY SSF51445 509 586 9.39E-142 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 Gene3D G3DSA:2.60.40.1180 599 709 1.9E-24 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 SUPERFAMILY SSF81296 13 160 1.35E-48 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 SMART SM00642 171 578 1.8E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08880 6a3dd12578d6512a412f48febbd3a907 716 SUPERFAMILY SSF51011 599 709 1.01E-21 T 22-04-2016 AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 PANTHER PTHR33490:SF2 5 291 5.2E-114 T 22-04-2016 AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 Pfam PF01841 Transglutaminase-like superfamily 144 246 7.3E-22 T 22-04-2016 IPR002931 Transglutaminase-like AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 PANTHER PTHR33490 5 291 5.2E-114 T 22-04-2016 AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 SUPERFAMILY SSF54001 7 274 2.55E-39 T 22-04-2016 AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 SMART SM00460 177 248 3.1E-20 T 22-04-2016 IPR002931 Transglutaminase-like AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 4 83 2.1E-23 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMK58_RS01160 2d8abc38a9c057678d4def1dde6e8ddb 313 Gene3D G3DSA:3.90.260.10 181 249 7.6E-13 T 22-04-2016 IPR002931 Transglutaminase-like AMK58_RS08755 8fc73d58d8c6105bd15888dccff67f37 432 PIRSF PIRSF006066 1 432 7.2E-152 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMK58_RS08755 8fc73d58d8c6105bd15888dccff67f37 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 419 7.0E-132 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMK58_RS08755 8fc73d58d8c6105bd15888dccff67f37 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 426 6.5E-158 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMK58_RS08755 8fc73d58d8c6105bd15888dccff67f37 432 PANTHER PTHR33362:SF6 1 432 2.7E-226 T 22-04-2016 AMK58_RS08755 8fc73d58d8c6105bd15888dccff67f37 432 PANTHER PTHR33362 1 432 2.7E-226 T 22-04-2016 AMK58_RS13105 61aed110549a455c2e1a1970271d335b 234 SMART SM00014 63 179 7.9E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS13105 61aed110549a455c2e1a1970271d335b 234 Pfam PF01569 PAP2 superfamily 68 181 8.4E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS13105 61aed110549a455c2e1a1970271d335b 234 SUPERFAMILY SSF48317 3 190 3.92E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS13105 61aed110549a455c2e1a1970271d335b 234 Gene3D G3DSA:1.20.144.10 5 185 2.5E-16 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS04660 94adae509f288a454127262472187f08 479 Gene3D G3DSA:3.40.50.1980 212 319 8.1E-53 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 Gene3D G3DSA:3.40.50.1980 14 211 9.1E-71 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 PANTHER PTHR33712:SF4 21 479 2.6E-303 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS04660 94adae509f288a454127262472187f08 479 SUPERFAMILY SSF53807 26 478 1.41E-167 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS04660 94adae509f288a454127262472187f08 479 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 30 472 1.7E-190 T 22-04-2016 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04660 94adae509f288a454127262472187f08 479 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 14 479 1.4E-268 T 22-04-2016 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04660 94adae509f288a454127262472187f08 479 Gene3D G3DSA:3.40.50.1980 345 479 6.2E-63 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 PANTHER PTHR33712 21 479 2.6E-303 T 22-04-2016 AMK58_RS04660 94adae509f288a454127262472187f08 479 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 466 5.3E-113 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.7E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.7E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.7E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.026 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.6E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 4.4E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 PANTHER PTHR11700 4 102 3.0E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 SMART SM01403 7 101 3.3E-61 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 Gene3D G3DSA:3.30.70.600 4 102 1.5E-46 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 SUPERFAMILY SSF54999 6 102 1.44E-40 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK58_RS10410 b5bb49601bb69cd8bca8204b904573ff 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00080 238ce45533d09aff333b48735b68285e 310 Pfam PF04796 Plasmid encoded RepA protein 93 246 4.5E-49 T 22-04-2016 IPR006881 Plasmid encoded RepA protein AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 13 151 1.9E-58 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 13 154 34.442 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 SUPERFAMILY SSF54637 13 152 1.5E-49 T 22-04-2016 IPR029069 HotDog domain AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 Pfam PF07977 FabA-like domain 22 146 2.0E-38 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 PANTHER PTHR30272 13 156 6.0E-68 T 22-04-2016 AMK58_RS06315 53de8601022b15336d350c1a576fae7c 156 Gene3D G3DSA:3.10.129.10 9 153 4.9E-57 T 22-04-2016 IPR029069 HotDog domain AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 Gene3D G3DSA:3.40.710.10 217 545 1.5E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 SUPERFAMILY SSF56601 217 551 6.36E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 SUPERFAMILY SSF56519 81 219 1.83E-36 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 540 2.2E-56 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 PANTHER PTHR30627 18 560 3.4E-128 T 22-04-2016 AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 Gene3D G3DSA:3.90.1310.10 149 211 1.4E-14 T 22-04-2016 AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 PANTHER PTHR30627:SF1 18 560 3.4E-128 T 22-04-2016 AMK58_RS03955 9353bcf7ffbe15ac436c115d23d5dc44 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 81 192 6.3E-12 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK58_RS02830 5751dfd373d53cd145fa194aec32a143 304 Pfam PF00899 ThiF family 60 261 2.6E-19 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK58_RS02830 5751dfd373d53cd145fa194aec32a143 304 SUPERFAMILY SSF69572 59 303 6.93E-26 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK58_RS02830 5751dfd373d53cd145fa194aec32a143 304 Gene3D G3DSA:3.40.50.720 59 302 2.1E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08330 b1611003a64efc39ff5848585f146f62 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 86.107 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK58_RS08330 b1611003a64efc39ff5848585f146f62 154 PANTHER PTHR30455 2 153 4.3E-62 T 22-04-2016 AMK58_RS08330 b1611003a64efc39ff5848585f146f62 154 PANTHER PTHR30455:SF2 2 153 4.3E-62 T 22-04-2016 AMK58_RS08330 b1611003a64efc39ff5848585f146f62 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 9.1E-54 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK58_RS08330 b1611003a64efc39ff5848585f146f62 154 Pfam PF03477 ATP cone domain 50 136 8.7E-16 T 22-04-2016 IPR005144 ATP-cone domain AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 285 1.1E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PIRSF PIRSF000770 16 292 1.5E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 Gene3D G3DSA:1.10.601.10 17 118 4.1E-37 T 22-04-2016 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PANTHER PTHR30376 1 288 6.0E-74 T 22-04-2016 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PRINTS PR00046 Major sigma-70 factor signature 237 249 9.9E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PRINTS PR00046 Major sigma-70 factor signature 74 87 9.9E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PRINTS PR00046 Major sigma-70 factor signature 98 106 9.9E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PRINTS PR00046 Major sigma-70 factor signature 271 282 9.9E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 PRINTS PR00046 Major sigma-70 factor signature 256 271 9.9E-24 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 SUPERFAMILY SSF88659 193 288 4.67E-22 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 Gene3D G3DSA:1.10.10.10 228 287 4.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 SUPERFAMILY SSF88946 16 118 2.09E-37 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 Pfam PF04545 Sigma-70, region 4 233 284 2.2E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01245 4f255947a3bfe97e5223cfb11f5093ed 300 Pfam PF04542 Sigma-70 region 2 50 119 7.5E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 SMART SM01329 6 337 4.5E-152 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 PANTHER PTHR11835 6 349 2.6E-205 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 5 478 1.8E-202 T 22-04-2016 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 PANTHER PTHR11835:SF43 6 349 2.6E-205 T 22-04-2016 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 SUPERFAMILY SSF53659 3 341 6.91E-114 T 22-04-2016 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 337 2.2E-92 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 228 247 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS09970 22b274076242904e27d934b7ebf6cda5 481 Gene3D G3DSA:3.40.718.10 3 344 5.5E-124 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 1.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 1.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 PANTHER PTHR10992 3 257 1.9E-37 T 22-04-2016 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 Pfam PF00561 alpha/beta hydrolase fold 24 155 3.8E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 Gene3D G3DSA:3.40.50.1820 3 257 6.3E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10270 007a018b757dfe47a1d0dbb10fdcaaa7 265 SUPERFAMILY SSF53474 4 257 2.89E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 SUPERFAMILY SSF51395 7 356 6.72E-112 T 22-04-2016 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 PANTHER PTHR11938 10 357 4.6E-116 T 22-04-2016 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 357 3.9E-126 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 Gene3D G3DSA:3.20.20.70 7 357 3.9E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 336 43.631 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS03015 eb156b85611c2b290cb4505840d26fc0 357 Pfam PF01180 Dihydroorotate dehydrogenase 44 340 3.2E-94 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK58_RS00260 dc04721365649c206bfd8e911fa7fe3c 268 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.3E-37 T 22-04-2016 IPR010275 Protein of unknown function DUF882 AMK58_RS00260 dc04721365649c206bfd8e911fa7fe3c 268 PANTHER PTHR37425 35 182 4.6E-33 T 22-04-2016 AMK58_RS00260 dc04721365649c206bfd8e911fa7fe3c 268 Gene3D G3DSA:3.30.1380.10 68 183 2.2E-28 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS00260 dc04721365649c206bfd8e911fa7fe3c 268 SUPERFAMILY SSF55166 67 183 7.59E-28 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS02855 7e7a7b9d339b0e39eb7679c41247cfa0 406 Pfam PF00872 Transposase, Mutator family 13 382 5.2E-131 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS02855 7e7a7b9d339b0e39eb7679c41247cfa0 406 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS02855 7e7a7b9d339b0e39eb7679c41247cfa0 406 PANTHER PTHR33217 7 405 2.5E-165 T 22-04-2016 AMK58_RS13425 7e7a7b9d339b0e39eb7679c41247cfa0 406 Pfam PF00872 Transposase, Mutator family 13 382 5.2E-131 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS13425 7e7a7b9d339b0e39eb7679c41247cfa0 406 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS13425 7e7a7b9d339b0e39eb7679c41247cfa0 406 PANTHER PTHR33217 7 405 2.5E-165 T 22-04-2016 AMK58_RS08495 7e7a7b9d339b0e39eb7679c41247cfa0 406 Pfam PF00872 Transposase, Mutator family 13 382 5.2E-131 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS08495 7e7a7b9d339b0e39eb7679c41247cfa0 406 ProSitePatterns PS01007 Transposases, Mutator family, signature. 236 260 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK58_RS08495 7e7a7b9d339b0e39eb7679c41247cfa0 406 PANTHER PTHR33217 7 405 2.5E-165 T 22-04-2016 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 271 1.9E-84 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 Gene3D G3DSA:3.10.310.10 4 120 3.7E-42 T 22-04-2016 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 273 35.782 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 Pfam PF01678 Diaminopimelate epimerase 5 123 1.9E-23 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 Pfam PF01678 Diaminopimelate epimerase 152 264 2.0E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 SUPERFAMILY SSF54506 145 270 4.26E-51 T 22-04-2016 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 Gene3D G3DSA:3.10.310.10 121 261 2.0E-55 T 22-04-2016 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 SUPERFAMILY SSF54506 4 130 8.79E-41 T 22-04-2016 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 PANTHER PTHR31689 4 277 1.9E-114 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS02475 af56e418281f60472fc4f21ca24a4e7b 278 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 SUPERFAMILY SSF56042 159 317 1.26E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 PANTHER PTHR30270:SF0 1 339 4.8E-94 T 22-04-2016 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 PANTHER PTHR30270 1 339 4.8E-94 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 SUPERFAMILY SSF55326 14 152 9.77E-32 T 22-04-2016 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 164 321 9.6E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 152 1.4E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 339 2.7E-87 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 336 29.634 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 Gene3D G3DSA:3.90.650.10 160 339 2.8E-41 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 PIRSF PIRSF005303 10 339 1.4E-77 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 AMK58_RS08300 d09f78884a11e98f64caf3c9b2aa60e6 339 Gene3D G3DSA:3.30.1330.10 13 154 5.3E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 Pfam PF02685 Glucokinase 14 322 1.6E-108 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 PANTHER PTHR30514:SF0 7 324 9.3E-80 T 22-04-2016 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 Hamap MF_00524 Glucokinase [glk]. 10 324 36.356 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 SUPERFAMILY SSF53067 12 321 6.72E-58 T 22-04-2016 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 Gene3D G3DSA:3.40.367.20 108 307 4.9E-75 T 22-04-2016 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 TIGRFAM TIGR00749 glk: glucokinase 14 316 3.8E-92 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK58_RS04485 84f51c23bfd4487523d193d01a29ff74 324 PANTHER PTHR30514 7 324 9.3E-80 T 22-04-2016 AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 Gene3D G3DSA:3.40.50.2020 15 223 6.5E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 PANTHER PTHR19278:SF9 39 222 3.1E-15 T 22-04-2016 AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 SUPERFAMILY SSF53271 15 219 8.75E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 PANTHER PTHR19278 39 222 3.1E-15 T 22-04-2016 AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 236 18.143 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS13255 4a381c77384f20afba3c36f899c6d89b 236 Pfam PF00156 Phosphoribosyl transferase domain 72 157 1.8E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PANTHER PTHR23502:SF19 7 380 3.7E-101 T 22-04-2016 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 Pfam PF07690 Major Facilitator Superfamily 18 356 7.3E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 SUPERFAMILY SSF103473 8 389 2.75E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 Gene3D G3DSA:1.20.1250.20 208 392 7.5E-9 T 22-04-2016 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PRINTS PR01035 Tetracycline resistance protein signature 134 156 5.4E-8 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PRINTS PR01035 Tetracycline resistance protein signature 19 35 5.4E-8 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PRINTS PR01035 Tetracycline resistance protein signature 307 327 5.4E-8 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PRINTS PR01035 Tetracycline resistance protein signature 49 68 5.4E-8 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 PANTHER PTHR23502 7 380 3.7E-101 T 22-04-2016 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 Gene3D G3DSA:1.20.1250.20 12 190 2.5E-29 T 22-04-2016 AMK58_RS02235 9d78484707e228a6d5df6e8ffac7229f 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 383 6.6E-94 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 SUPERFAMILY SSF51735 6 245 2.09E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 1.2E-61 T 22-04-2016 AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 211 0.0013 T 22-04-2016 AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PANTHER PTHR24322 155 186 3.3E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PANTHER PTHR24322 11 138 3.3E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00145 078f94c0680703113d00efb5efc18a7a 246 Gene3D G3DSA:3.40.50.720 3 245 2.4E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PANTHER PTHR32089 80 401 1.3E-82 T 22-04-2016 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 Gene3D G3DSA:1.10.287.950 174 368 1.3E-44 T 22-04-2016 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 216 397 4.8E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 SMART SM00283 144 398 2.1E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 2.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 165 194 2.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 2.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 242 269 2.0E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 PANTHER PTHR32089:SF56 80 401 1.3E-82 T 22-04-2016 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 SUPERFAMILY SSF58104 60 81 2.49E-55 T 22-04-2016 AMK58_RS08090 ed40c11b010a65c0e0c8755da91263df 406 SUPERFAMILY SSF58104 150 397 2.49E-55 T 22-04-2016 AMK58_RS13515 bf229f1dd2e7d6a804606b054429093b 412 SUPERFAMILY SSF52129 109 256 2.09E-6 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS13515 bf229f1dd2e7d6a804606b054429093b 412 Pfam PF00656 Caspase domain 86 198 6.0E-5 T 22-04-2016 AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 PANTHER PTHR10108 20 148 1.2E-62 T 22-04-2016 AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 PANTHER PTHR10108:SF893 20 148 1.2E-62 T 22-04-2016 AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 Gene3D G3DSA:3.40.50.150 8 245 2.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 Pfam PF13847 Methyltransferase domain 35 157 1.1E-10 T 22-04-2016 IPR025714 Methyltransferase domain AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 PIRSF PIRSF034653 1 248 3.3E-116 T 22-04-2016 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 PANTHER PTHR10108 174 248 1.2E-62 T 22-04-2016 AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 PANTHER PTHR10108:SF893 174 248 1.2E-62 T 22-04-2016 AMK58_RS04980 3ba4a855a1d0ffc8f6e304a9d18af2c2 248 SUPERFAMILY SSF53335 6 243 2.13E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02210 5aca03e35755ec25c1ee7b6f40561914 118 Gene3D G3DSA:2.60.120.10 20 115 9.5E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS02210 5aca03e35755ec25c1ee7b6f40561914 118 SUPERFAMILY SSF51182 12 115 8.15E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS02210 5aca03e35755ec25c1ee7b6f40561914 118 Pfam PF05899 Protein of unknown function (DUF861) 42 113 2.1E-19 T 22-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMK58_RS02210 5aca03e35755ec25c1ee7b6f40561914 118 PANTHER PTHR40943 1 118 7.9E-29 T 22-04-2016 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 Gene3D G3DSA:3.20.20.120 134 322 7.3E-57 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 116 1.5E-9 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 Gene3D G3DSA:3.30.390.10 6 97 1.1E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 Gene3D G3DSA:3.30.390.10 98 133 3.5E-10 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 SMART SM00922 135 227 1.7E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 PANTHER PTHR13794:SF60 1 323 4.1E-91 T 22-04-2016 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 177 208 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 Pfam PF13378 Enolase C-terminal domain-like 138 297 1.4E-28 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 SUPERFAMILY SSF54826 6 116 5.89E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 SUPERFAMILY SSF51604 123 332 1.97E-54 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS04455 73f16877019c075ebf1541bd28cc9d25 332 PANTHER PTHR13794 1 323 4.1E-91 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 SUPERFAMILY SSF51064 132 188 8.11E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 Pfam PF01025 GrpE 21 187 1.2E-51 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 Hamap MF_01151 Protein GrpE [grpE]. 2 187 19.522 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 Gene3D G3DSA:2.30.22.10 131 188 2.3E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 Gene3D G3DSA:3.90.20.20 35 129 1.4E-28 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 PRINTS PR00773 GrpE protein signature 166 185 1.46E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 PRINTS PR00773 GrpE protein signature 139 154 1.46E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 PRINTS PR00773 GrpE protein signature 80 95 1.46E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 PRINTS PR00773 GrpE protein signature 52 68 1.46E-23 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 SUPERFAMILY SSF58014 35 131 5.1E-25 T 22-04-2016 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 ProSitePatterns PS01071 grpE protein signature. 142 185 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS13780 5b287f6e92abf7cdaac631b8c797ca85 202 PANTHER PTHR21237 10 190 9.3E-65 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 SUPERFAMILY SSF50621 240 378 7.74E-30 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PANTHER PTHR11482 1 378 3.5E-119 T 22-04-2016 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 SUPERFAMILY SSF51419 15 261 2.13E-65 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 267 374 1.8E-14 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 259 6.6E-58 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PANTHER PTHR11482:SF6 1 378 3.5E-119 T 22-04-2016 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 2.24E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 2.24E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 166 179 2.24E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 249 268 2.24E-17 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 Gene3D G3DSA:3.20.20.10 25 246 6.0E-67 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 Gene3D G3DSA:2.40.37.10 247 377 9.9E-27 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01182 Ornithine decarboxylase signature 116 138 4.64E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01182 Ornithine decarboxylase signature 42 69 4.64E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01182 Ornithine decarboxylase signature 86 110 4.64E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01182 Ornithine decarboxylase signature 320 330 4.64E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 PRINTS PR01182 Ornithine decarboxylase signature 16 40 4.64E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS02225 b2538ae3aafb154e54a3165c4cfbee28 378 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 204 217 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 PANTHER PTHR32322:SF9 4 288 2.6E-54 T 22-04-2016 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 SUPERFAMILY SSF103481 183 280 3.66E-11 T 22-04-2016 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 Pfam PF00892 EamA-like transporter family 141 277 1.1E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 Pfam PF00892 EamA-like transporter family 7 129 2.5E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 SUPERFAMILY SSF103481 35 133 3.4E-13 T 22-04-2016 AMK58_RS03985 f4975d12b03a625313c4f7f687bc99ad 292 PANTHER PTHR32322 4 288 2.6E-54 T 22-04-2016 AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 PANTHER PTHR11911:SF90 1 224 4.8E-39 T 22-04-2016 AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 SUPERFAMILY SSF54631 1 149 3.92E-39 T 22-04-2016 AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 Pfam PF04972 BON domain 156 223 1.5E-12 T 22-04-2016 IPR007055 BON domain AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 Gene3D G3DSA:3.10.580.10 1 144 2.5E-36 T 22-04-2016 AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 PIRSF PIRSF036990 1 232 1.4E-81 T 22-04-2016 IPR017080 Uncharacterised conserved protein UCP036990, CBS, BON AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 SMART SM00116 10 58 1.2E-12 T 22-04-2016 IPR000644 CBS domain AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 SMART SM00116 97 144 4.6E-9 T 22-04-2016 IPR000644 CBS domain AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 PANTHER PTHR11911 1 224 4.8E-39 T 22-04-2016 AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 Pfam PF00571 CBS domain 4 55 7.6E-17 T 22-04-2016 IPR000644 CBS domain AMK58_RS06910 71c00bac4c8627592ccf16638beec7ea 233 Pfam PF00571 CBS domain 90 144 1.1E-12 T 22-04-2016 IPR000644 CBS domain AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 ProSitePatterns PS01068 OmpA-like domain. 146 191 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 Gene3D G3DSA:3.30.1330.60 104 212 3.1E-30 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 PANTHER PTHR30128 88 212 5.6E-31 T 22-04-2016 AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 SUPERFAMILY SSF103088 95 212 3.4E-28 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 Pfam PF00691 OmpA family 111 206 2.2E-20 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 PRINTS PR01021 OMPA domain signature 159 175 9.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 PRINTS PR01021 OMPA domain signature 144 159 9.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS12945 6367b4229c67d86678fa74dfc6a5790a 216 PRINTS PR01021 OMPA domain signature 112 134 9.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 92 99 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 SUPERFAMILY SSF53807 7 518 9.16E-171 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 PANTHER PTHR33712 33 260 1.4E-196 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 PANTHER PTHR33712 278 507 1.4E-196 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 Pfam PF11844 Domain of unknown function (DUF3364) 6 60 1.1E-24 T 22-04-2016 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 Gene3D G3DSA:3.40.50.1980 74 217 3.4E-53 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 Gene3D G3DSA:3.40.50.1980 349 473 6.4E-53 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 74 497 5.8E-115 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 Gene3D G3DSA:3.40.50.1980 222 323 5.5E-36 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 6 519 1.2E-255 T 22-04-2016 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 PANTHER PTHR33712:SF7 33 260 1.4E-196 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 PANTHER PTHR33712:SF7 278 507 1.4E-196 T 22-04-2016 AMK58_RS04655 1429b534c9c4d5f97514f1d2410b3ff7 519 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 155 169 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 Gene3D G3DSA:1.10.10.10 4 57 7.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 PANTHER PTHR30154 1 170 7.6E-62 T 22-04-2016 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 SMART SM00344 6 115 3.6E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 PANTHER PTHR30154:SF22 1 170 7.6E-62 T 22-04-2016 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 SUPERFAMILY SSF46785 5 66 3.63E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 SUPERFAMILY SSF54909 66 155 1.18E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 Pfam PF01037 Lrp/AsnC ligand binding domain 74 145 2.9E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.6E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.6E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.6E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.8E-18 T 22-04-2016 AMK58_RS03355 5a088b2a160fdb8732383cd61901c3fc 184 Gene3D G3DSA:3.30.70.920 59 142 8.6E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 Hamap MF_00415 Flagellar L-ring protein [flgH]. 12 254 24.629 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PRINTS PR01008 Flagellar L-ring protein signature 233 247 2.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PRINTS PR01008 Flagellar L-ring protein signature 196 212 2.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PRINTS PR01008 Flagellar L-ring protein signature 170 185 2.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PRINTS PR01008 Flagellar L-ring protein signature 217 231 2.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PRINTS PR01008 Flagellar L-ring protein signature 90 102 2.5E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 Pfam PF02107 Flagellar L-ring protein 69 255 3.8E-57 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PANTHER PTHR34933:SF1 42 256 1.0E-56 T 22-04-2016 AMK58_RS10170 6338520407521cf9b1af9b771291b9aa 256 PANTHER PTHR34933 42 256 1.0E-56 T 22-04-2016 AMK58_RS01700 bb8111cd985680839b8e097125166365 130 PANTHER PTHR14289 5 123 3.9E-54 T 22-04-2016 AMK58_RS01700 bb8111cd985680839b8e097125166365 130 Hamap MF_00791 Protein ApaG [apaG]. 2 130 32.169 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG AMK58_RS01700 bb8111cd985680839b8e097125166365 130 Gene3D G3DSA:2.60.40.1470 3 124 9.5E-49 T 22-04-2016 IPR007474 ApaG domain AMK58_RS01700 bb8111cd985680839b8e097125166365 130 Pfam PF04379 Protein of unknown function (DUF525) 20 104 1.2E-35 T 22-04-2016 IPR007474 ApaG domain AMK58_RS01700 bb8111cd985680839b8e097125166365 130 SUPERFAMILY SSF110069 5 126 6.02E-49 T 22-04-2016 IPR007474 ApaG domain AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 PANTHER PTHR30445 4 549 2.9E-202 T 22-04-2016 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Pfam PF02080 TrkA-C domain 293 355 3.2E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Pfam PF02080 TrkA-C domain 210 274 6.3E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 PANTHER PTHR30445:SF1 4 549 2.9E-202 T 22-04-2016 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 SUPERFAMILY SSF116726 285 360 1.57E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Pfam PF06826 Predicted Permease Membrane Region 11 178 2.2E-35 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Pfam PF06826 Predicted Permease Membrane Region 374 545 5.8E-45 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 378 532 9.3E-42 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 8.9E-33 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Gene3D G3DSA:3.30.70.1450 287 356 8.3E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 Gene3D G3DSA:3.30.70.1450 215 275 6.5E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01530 4a450d51df38fdd6d5cabc1470272c4b 549 SUPERFAMILY SSF116726 207 274 4.84E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PANTHER PTHR24423 67 76 2.0E-55 T 22-04-2016 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 Gene3D G3DSA:3.30.565.10 498 659 2.3E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 634 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 653 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 546 654 1.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 Gene3D G3DSA:1.10.287.130 420 492 9.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SUPERFAMILY SSF158472 350 400 7.85E-6 T 22-04-2016 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PANTHER PTHR24423:SF503 67 76 2.0E-55 T 22-04-2016 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PANTHER PTHR24423:SF503 407 657 2.0E-55 T 22-04-2016 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SMART SM00388 428 496 1.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SMART SM00304 350 403 1.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SMART SM00387 543 656 9.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 PANTHER PTHR24423 407 657 2.0E-55 T 22-04-2016 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SUPERFAMILY SSF47384 415 498 2.55E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SMART SM01358 72 321 3.5E-19 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 Pfam PF00672 HAMP domain 331 397 1.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04365 56907da7361c1cb55907fe815dae5aa9 691 SUPERFAMILY SSF55874 486 661 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 Gene3D G3DSA:1.10.287.950 294 512 3.1E-44 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 541 1.1E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PANTHER PTHR32089:SF40 266 545 1.1E-146 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PANTHER PTHR32089:SF40 119 234 1.1E-146 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 SMART SM00304 199 252 3.9E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PANTHER PTHR32089 266 545 1.1E-146 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PANTHER PTHR32089 119 234 1.1E-146 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 1.5E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 1.5E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 492 1.5E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 172 5.4E-15 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 SMART SM00283 288 542 3.0E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 Pfam PF00672 HAMP domain 178 248 4.9E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 SUPERFAMILY SSF58104 227 254 4.32E-63 T 22-04-2016 AMK58_RS01380 089271b19610cbc73bb36cc42a1820a5 548 SUPERFAMILY SSF58104 294 541 4.32E-63 T 22-04-2016 AMK58_RS08110 7bc26ef7f82c174a41eff97ee9433d77 320 PANTHER PTHR34308 1 318 2.4E-91 T 22-04-2016 AMK58_RS08110 7bc26ef7f82c174a41eff97ee9433d77 320 Pfam PF03186 CobD/Cbib protein 8 302 2.6E-91 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK58_RS08110 7bc26ef7f82c174a41eff97ee9433d77 320 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 320 100.473 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK58_RS08110 7bc26ef7f82c174a41eff97ee9433d77 320 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 301 1.7E-61 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK58_RS08110 7bc26ef7f82c174a41eff97ee9433d77 320 PANTHER PTHR34308:SF1 1 318 2.4E-91 T 22-04-2016 AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 PANTHER PTHR21496 3 265 8.4E-124 T 22-04-2016 AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 PANTHER PTHR21496:SF6 3 265 8.4E-124 T 22-04-2016 AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 Gene3D G3DSA:1.20.1260.10 107 211 1.5E-5 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 Pfam PF04305 Protein of unknown function (DUF455) 15 261 1.5E-105 T 22-04-2016 IPR007402 Protein of unknown function DUF455 AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 PIRSF PIRSF012318 1 265 2.1E-96 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 AMK58_RS08910 3d26812f37e940de04f2dbd36ebf6703 265 SUPERFAMILY SSF47240 73 218 4.78E-21 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 SUPERFAMILY SSF52540 769 864 2.26E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 SUPERFAMILY SSF52540 348 469 2.26E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 SUPERFAMILY SSF90123 10 328 2.49E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 PANTHER PTHR24221 760 879 2.2E-62 T 22-04-2016 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 PANTHER PTHR24221 61 462 2.2E-62 T 22-04-2016 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 Gene3D G3DSA:1.20.1560.10 15 323 2.4E-41 T 22-04-2016 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 Pfam PF00005 ABC transporter 728 809 6.4E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 Gene3D G3DSA:3.40.50.300 347 461 1.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 Gene3D G3DSA:3.40.50.300 715 866 4.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 PANTHER PTHR24221:SF161 760 879 2.2E-62 T 22-04-2016 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 PANTHER PTHR24221:SF161 61 462 2.2E-62 T 22-04-2016 AMK58_RS00215 ef56a7586bb32c89f35da112a0affba1 879 Pfam PF00664 ABC transporter transmembrane region 67 290 4.1E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Gene3D G3DSA:3.30.450.20 144 266 1.7E-5 T 22-04-2016 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Gene3D G3DSA:3.30.450.20 268 393 2.8E-10 T 22-04-2016 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 SUPERFAMILY SSF55874 471 640 4.71E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Pfam PF08448 PAS fold 171 267 4.5E-6 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Gene3D G3DSA:1.10.287.130 406 468 1.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 PANTHER PTHR24423 31 142 8.9E-86 T 22-04-2016 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 PANTHER PTHR24423 262 639 8.9E-86 T 22-04-2016 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 SUPERFAMILY SSF47384 401 483 2.75E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 SMART SM00388 414 482 9.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 482 4.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Pfam PF12860 PAS fold 285 398 7.3E-22 T 22-04-2016 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 620 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 639 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 581 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Gene3D G3DSA:3.30.565.10 469 639 3.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 SMART SM00387 528 642 6.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 SUPERFAMILY SSF55785 263 392 5.02E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS13285 44fb509371c42e063db917f8a3f25601 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 640 5.3E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09360 b27cd23447536d78d7984dea3b398fcf 309 PIRSF PIRSF038992 21 308 9.3E-65 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK58_RS09360 b27cd23447536d78d7984dea3b398fcf 309 SUPERFAMILY SSF51569 20 305 1.17E-65 T 22-04-2016 AMK58_RS09360 b27cd23447536d78d7984dea3b398fcf 309 Gene3D G3DSA:3.20.20.70 19 307 1.8E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS09360 b27cd23447536d78d7984dea3b398fcf 309 SMART SM01133 40 289 1.7E-46 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK58_RS09360 b27cd23447536d78d7984dea3b398fcf 309 Pfam PF01791 DeoC/LacD family aldolase 41 289 3.9E-35 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 PANTHER PTHR30008 425 516 8.4E-141 T 22-04-2016 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 PANTHER PTHR30008 17 379 8.4E-141 T 22-04-2016 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 22 504 27.136 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 Pfam PF13742 OB-fold nucleic acid binding domain 25 118 1.3E-27 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 PANTHER PTHR30008:SF0 425 516 8.4E-141 T 22-04-2016 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 PANTHER PTHR30008:SF0 17 379 8.4E-141 T 22-04-2016 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 Pfam PF02601 Exonuclease VII, large subunit 141 501 1.4E-91 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMK58_RS11330 bedbbfd593fec27656a1af9677a10665 543 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 26 368 7.2E-119 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 PANTHER PTHR11067 6 196 5.2E-68 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 13 196 1.5E-46 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 Pfam PF01725 Ham1 family 13 196 1.6E-49 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 SUPERFAMILY SSF52972 8 198 2.15E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 Gene3D G3DSA:3.90.950.10 9 197 1.5E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 11 200 43.786 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK58_RS13795 237a094f807e5798855e8d659d8bc53e 200 PANTHER PTHR11067:SF9 6 196 5.2E-68 T 22-04-2016 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 52 248 1.2E-91 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 Pfam PF00813 FliP family 52 244 4.3E-82 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PANTHER PTHR30587:SF0 36 250 1.4E-111 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 247 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 197 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 108 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 198 219 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 69 89 1.6E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 177 192 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 238 248 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 120 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 120 134 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 48 57 5.9E-26 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 PANTHER PTHR30587 36 250 1.4E-111 T 22-04-2016 AMK58_RS10100 bb043c5719110f52db77a77cac84040d 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 225 237 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK58_RS07890 c255461a07370106c29f5bedbbddcc46 155 Gene3D G3DSA:3.40.50.1000 40 139 5.8E-4 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS07890 c255461a07370106c29f5bedbbddcc46 155 SUPERFAMILY SSF56784 6 140 3.67E-10 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS03145 f89167086670cba3c7541e841427ad3f 306 PANTHER PTHR23150 1 245 6.7E-100 T 22-04-2016 AMK58_RS03145 f89167086670cba3c7541e841427ad3f 306 PANTHER PTHR23150 261 304 6.7E-100 T 22-04-2016 AMK58_RS03145 f89167086670cba3c7541e841427ad3f 306 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1 301 5.5E-86 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS03145 f89167086670cba3c7541e841427ad3f 306 SUPERFAMILY SSF56436 1 303 2.04E-91 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS03145 f89167086670cba3c7541e841427ad3f 306 Gene3D G3DSA:3.90.1580.10 1 304 3.9E-94 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 9.8E-69 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 SUPERFAMILY SSF47446 328 428 3.27E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 SMART SM00382 98 408 1.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Pfam PF02978 Signal peptide binding domain 328 427 1.3E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Gene3D G3DSA:1.10.260.30 328 432 1.1E-39 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.0E-181 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 PANTHER PTHR11564:SF7 1 434 2.6E-238 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 SUPERFAMILY SSF52540 42 354 3.98E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 SMART SM00963 1 86 3.6E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 PANTHER PTHR11564 1 434 2.6E-238 T 22-04-2016 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Gene3D G3DSA:3.40.50.300 93 296 2.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Gene3D G3DSA:1.20.120.140 2 89 1.1E-34 T 22-04-2016 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 SMART SM00962 99 295 2.9E-106 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS12260 e8c9fa9f68e4fe31fd86db98ab223d38 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 447 33.323 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK58_RS12095 edb017dd1d2c711a1dcc0fb6c5bd3bb8 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 258 6.5E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS12095 edb017dd1d2c711a1dcc0fb6c5bd3bb8 259 SUPERFAMILY SSF52096 3 259 1.13E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS12095 edb017dd1d2c711a1dcc0fb6c5bd3bb8 259 Gene3D G3DSA:1.10.12.10 203 259 4.2E-15 T 22-04-2016 IPR014748 Crontonase, C-terminal AMK58_RS12095 edb017dd1d2c711a1dcc0fb6c5bd3bb8 259 Gene3D G3DSA:3.90.226.10 4 201 9.5E-52 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS12095 edb017dd1d2c711a1dcc0fb6c5bd3bb8 259 PANTHER PTHR11941 5 256 9.4E-62 T 22-04-2016 AMK58_RS03900 4d636a11a87dbdecab1ae46ecfa1dd65 320 PANTHER PTHR35851:SF1 17 315 4.8E-27 T 22-04-2016 AMK58_RS03900 4d636a11a87dbdecab1ae46ecfa1dd65 320 PANTHER PTHR35851 17 315 4.8E-27 T 22-04-2016 AMK58_RS03900 4d636a11a87dbdecab1ae46ecfa1dd65 320 Pfam PF03799 Cell division protein FtsQ 171 290 6.5E-19 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB AMK58_RS03900 4d636a11a87dbdecab1ae46ecfa1dd65 320 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 73 308 19.27 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 AMK58_RS03900 4d636a11a87dbdecab1ae46ecfa1dd65 320 Pfam PF08478 POTRA domain, FtsQ-type 99 167 1.9E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type AMK58_RS03285 bbba4c43512566f93693faed215484bd 235 SUPERFAMILY SSF81342 14 200 6.2E-32 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMK58_RS03285 bbba4c43512566f93693faed215484bd 235 Pfam PF01292 Prokaryotic cytochrome b561 18 196 3.3E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMK58_RS03285 bbba4c43512566f93693faed215484bd 235 Gene3D G3DSA:1.20.950.20 46 197 4.6E-7 T 22-04-2016 AMK58_RS03285 bbba4c43512566f93693faed215484bd 235 PANTHER PTHR30485 1 211 7.4E-12 T 22-04-2016 AMK58_RS03285 bbba4c43512566f93693faed215484bd 235 PANTHER PTHR30485:SF0 1 211 7.4E-12 T 22-04-2016 AMK58_RS05910 dd339eba43eba8cfdc08ba40c6800c07 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 284 1.9E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS05910 dd339eba43eba8cfdc08ba40c6800c07 310 PANTHER PTHR32196 12 309 3.9E-118 T 22-04-2016 AMK58_RS05910 dd339eba43eba8cfdc08ba40c6800c07 310 PANTHER PTHR32196:SF33 12 309 3.9E-118 T 22-04-2016 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 SUPERFAMILY SSF88659 96 157 5.79E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 PANTHER PTHR30173 8 160 3.5E-38 T 22-04-2016 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 157 8.4E-28 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 Pfam PF08281 Sigma-70, region 4 101 152 2.1E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 Gene3D G3DSA:1.10.10.10 96 160 4.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 Pfam PF04542 Sigma-70 region 2 11 74 9.1E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 SUPERFAMILY SSF88946 4 85 1.65E-19 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05320 44b781942cda930c1c61feaba82eff5e 169 Gene3D G3DSA:1.10.1740.10 4 75 4.2E-22 T 22-04-2016 AMK58_RS01735 9db94f06b2508e7d3921c7670e9bf33c 332 Pfam PF03167 Uracil DNA glycosylase superfamily 89 178 6.7E-7 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01735 9db94f06b2508e7d3921c7670e9bf33c 332 SUPERFAMILY SSF52141 14 177 4.25E-13 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01735 9db94f06b2508e7d3921c7670e9bf33c 332 Gene3D G3DSA:3.40.470.10 21 229 7.1E-12 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 SMART SM00283 293 547 2.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 Pfam PF00672 HAMP domain 183 251 1.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 546 5.7E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PANTHER PTHR32089:SF40 169 238 5.3E-103 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PANTHER PTHR32089 169 238 5.3E-103 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 4.5E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 4.5E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 4.5E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 4.5E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PANTHER PTHR32089:SF40 271 550 5.3E-103 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 Gene3D G3DSA:1.10.287.950 307 517 2.5E-43 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 PANTHER PTHR32089 271 550 5.3E-103 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 SUPERFAMILY SSF58104 230 258 3.4E-55 T 22-04-2016 AMK58_RS05565 5ebd4b94a3a0a2ae520697cc3716212b 553 SUPERFAMILY SSF58104 299 546 3.4E-55 T 22-04-2016 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 SUPERFAMILY SSF55073 352 509 4.79E-48 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS13115 06b6198698c50826bd769262657146f7 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 504 5.5E-42 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13115 06b6198698c50826bd769262657146f7 517 SUPERFAMILY SSF52172 21 159 1.85E-10 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS13115 06b6198698c50826bd769262657146f7 517 Pfam PF11849 Domain of unknown function (DUF3369) 145 318 5.6E-48 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 SMART SM00267 336 508 5.8E-61 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13115 06b6198698c50826bd769262657146f7 517 Gene3D G3DSA:3.30.70.270 349 510 3.8E-54 T 22-04-2016 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 Gene3D G3DSA:3.40.50.2300 25 166 3.2E-11 T 22-04-2016 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 Pfam PF00072 Response regulator receiver domain 25 134 1.9E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 PANTHER PTHR10799 371 504 1.4E-26 T 22-04-2016 AMK58_RS13115 06b6198698c50826bd769262657146f7 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 508 1.5E-48 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 SMART SM00345 21 82 7.6E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 6.12E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 6.12E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 Gene3D G3DSA:1.20.120.530 87 224 1.1E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 PANTHER PTHR11751:SF384 42 108 4.3E-26 T 22-04-2016 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 5.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 SMART SM00895 92 216 4.5E-16 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 Gene3D G3DSA:1.10.10.10 6 82 2.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 PANTHER PTHR11751 42 108 4.3E-26 T 22-04-2016 AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 SUPERFAMILY SSF48008 89 223 1.39E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 SUPERFAMILY SSF46785 12 108 3.08E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06915 7c24b48151b79af92cf27f3164f5f110 229 Pfam PF07729 FCD domain 92 213 1.8E-24 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS08555 eb6252f3f567e6ef432c3353767ff058 623 Pfam PF01594 Domain of unknown function DUF20 184 378 1.6E-36 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS08555 eb6252f3f567e6ef432c3353767ff058 623 Pfam PF01594 Domain of unknown function DUF20 30 135 1.6E-13 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS08555 eb6252f3f567e6ef432c3353767ff058 623 PANTHER PTHR21716 144 438 2.4E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS08555 eb6252f3f567e6ef432c3353767ff058 623 PANTHER PTHR21716 29 118 2.4E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 Pfam PF08502 LeuA allosteric (dimerisation) domain 380 521 5.5E-27 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 527 2.6E-199 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 PANTHER PTHR10277 4 533 1.1E-248 T 22-04-2016 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 Pfam PF00682 HMGL-like 6 269 1.8E-43 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 SUPERFAMILY SSF51569 3 296 3.66E-79 T 22-04-2016 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 SMART SM00917 378 525 1.9E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 PANTHER PTHR10277:SF5 4 533 1.1E-248 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 SUPERFAMILY SSF110921 422 520 4.84E-19 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS11525 18e86198ff967ff3b53a04694cb59466 534 Gene3D G3DSA:3.20.20.70 4 351 5.3E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 16 112 5.0E-34 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 8 113 24.514 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 SUPERFAMILY SSF81301 12 114 3.27E-35 T 22-04-2016 AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 Pfam PF02410 Ribosomal silencing factor during starvation 20 112 1.9E-27 T 22-04-2016 AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 PANTHER PTHR21043 10 117 8.9E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK58_RS11720 e31e5edf9c64ff69816809991954fff6 126 Gene3D G3DSA:3.30.460.10 12 113 4.1E-36 T 22-04-2016 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 417 1.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SMART SM00387 459 571 5.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Gene3D G3DSA:3.40.50.2300 591 709 2.1E-31 T 22-04-2016 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Gene3D G3DSA:3.30.565.10 396 570 4.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PANTHER PTHR24423:SF438 338 709 1.3E-122 T 22-04-2016 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 569 1.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SUPERFAMILY SSF55874 408 569 4.45E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PANTHER PTHR24423 338 709 1.3E-122 T 22-04-2016 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SMART SM00388 354 418 1.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SUPERFAMILY SSF52172 590 706 3.56E-27 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SMART SM00448 591 701 1.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 568 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 SUPERFAMILY SSF47384 344 416 6.67E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Pfam PF00072 Response regulator receiver domain 594 701 7.6E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04030 ab85932b9eebff1d4039ec57f1f1125b 711 Gene3D G3DSA:3.30.450.20 96 174 8.3E-6 T 22-04-2016 AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 188 8.8E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 1.9E-12 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 Gene3D G3DSA:3.40.50.1000 10 216 2.8E-31 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 SUPERFAMILY SSF56784 10 217 7.09E-36 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 10 187 1.9E-57 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase AMK58_RS12290 9f189745f61682b05c9aab1232cfe520 224 PANTHER PTHR12725 1 215 1.7E-32 T 22-04-2016 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 PANTHER PTHR11953 1 236 9.2E-77 T 22-04-2016 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.9E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 3.4E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 SUPERFAMILY SSF55666 153 236 1.7E-23 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.6E-114 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 PANTHER PTHR11953:SF0 1 236 9.2E-77 T 22-04-2016 AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 Gene3D G3DSA:3.30.230.70 8 237 1.3E-29 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 SUPERFAMILY SSF54211 1 181 2.63E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS13790 fc213762196875ee6b8faec16ac1ff0e 239 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.395 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 SUPERFAMILY SSF53383 15 434 9.35E-183 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 Gene3D G3DSA:3.90.1150.10 297 434 4.2E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 234 250 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 PIRSF PIRSF000412 5 436 1.3E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 Gene3D G3DSA:3.40.640.10 49 296 1.9E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 PANTHER PTHR11680 9 433 2.7E-249 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 Pfam PF00464 Serine hydroxymethyltransferase 20 397 8.0E-179 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK58_RS08335 87bf42b41067059376ec6249734783e8 436 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 19 434 53.636 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK58_RS01390 e2fcd178d0beebbcee2a4f7df159e742 132 SUPERFAMILY SSF52821 6 126 9.69E-29 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS01390 e2fcd178d0beebbcee2a4f7df159e742 132 SMART SM00450 19 123 3.5E-18 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS01390 e2fcd178d0beebbcee2a4f7df159e742 132 Pfam PF00581 Rhodanese-like domain 20 120 1.8E-15 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS01390 e2fcd178d0beebbcee2a4f7df159e742 132 Gene3D G3DSA:3.40.250.10 2 127 3.2E-32 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS27140 57caef6b16a71bb13159af28f41553b8 100 PANTHER PTHR32243:SF31 6 100 6.1E-16 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK58_RS27140 57caef6b16a71bb13159af28f41553b8 100 SUPERFAMILY SSF161098 13 98 7.19E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS27140 57caef6b16a71bb13159af28f41553b8 100 Gene3D G3DSA:1.10.3720.10 13 98 5.7E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS27140 57caef6b16a71bb13159af28f41553b8 100 PANTHER PTHR32243 6 100 6.1E-16 T 22-04-2016 AMK58_RS00415 494a638a0fdfdee27c60f42a822d5d1f 202 PIRSF PIRSF006305 5 200 1.4E-40 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 AMK58_RS00415 494a638a0fdfdee27c60f42a822d5d1f 202 Pfam PF02545 Maf-like protein 8 195 2.0E-37 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 AMK58_RS00415 494a638a0fdfdee27c60f42a822d5d1f 202 SUPERFAMILY SSF52972 6 195 1.7E-46 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK58_RS00415 494a638a0fdfdee27c60f42a822d5d1f 202 Gene3D G3DSA:3.90.950.10 7 198 4.8E-48 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK58_RS00415 494a638a0fdfdee27c60f42a822d5d1f 202 Hamap MF_00528 Septum formation protein Maf [maf]. 7 201 24.068 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 AMK58_RS03275 18af1d3b858ebed3b3643c1e312f1c04 171 Gene3D G3DSA:3.60.21.10 1 164 8.8E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS03275 18af1d3b858ebed3b3643c1e312f1c04 171 SUPERFAMILY SSF56300 1 141 7.94E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS03275 18af1d3b858ebed3b3643c1e312f1c04 171 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 114 3.1E-6 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 PANTHER PTHR34296:SF1 21 349 8.5E-145 T 22-04-2016 AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 Gene3D G3DSA:3.40.50.2300 25 164 3.9E-45 T 22-04-2016 AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 Pfam PF02608 Basic membrane protein 28 289 9.3E-49 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 SUPERFAMILY SSF53822 167 237 4.62E-6 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 Gene3D G3DSA:3.40.50.2300 169 227 4.3E-4 T 22-04-2016 AMK58_RS05915 068610a98ad20701304c85bddbff3f8c 358 PANTHER PTHR34296 21 349 8.5E-145 T 22-04-2016 AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 21.749 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.5E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 SUPERFAMILY SSF50104 4 102 1.54E-35 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 Pfam PF00467 KOW motif 9 37 3.0E-7 T 22-04-2016 IPR005824 KOW AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 Gene3D G3DSA:2.30.30.30 3 92 7.7E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 PANTHER PTHR12903 4 104 3.4E-49 T 22-04-2016 AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 SMART SM00739 4 31 1.3E-4 T 22-04-2016 IPR005824 KOW AMK58_RS10350 c0fd1130f80c76f64c7753418fa7c761 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 103 2.8E-29 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 313 2.1E-97 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 270 279 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 1.1E-44 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PANTHER PTHR11735 1 339 2.7E-157 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 SUPERFAMILY SSF53067 3 123 4.99E-29 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 Gene3D G3DSA:3.30.420.40 238 291 4.2E-4 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 320 6.3E-126 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 SUPERFAMILY SSF53067 102 316 1.51E-41 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 PANTHER PTHR11735:SF6 1 339 2.7E-157 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 Gene3D G3DSA:3.30.420.40 1 158 9.8E-47 T 22-04-2016 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 Pfam PF00814 Glycoprotease family 23 314 6.2E-97 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS02035 564b053226c3447e85cecb3344f03df0 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 338 64.759 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS06695 b3edcd6c1198d5e6aa1a2a861d3ba315 409 PANTHER PTHR23501 58 402 3.4E-20 T 22-04-2016 AMK58_RS06695 b3edcd6c1198d5e6aa1a2a861d3ba315 409 SUPERFAMILY SSF103473 11 393 3.01E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06695 b3edcd6c1198d5e6aa1a2a861d3ba315 409 Pfam PF07690 Major Facilitator Superfamily 20 236 3.6E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06695 b3edcd6c1198d5e6aa1a2a861d3ba315 409 Gene3D G3DSA:1.20.1250.20 17 186 5.0E-24 T 22-04-2016 AMK58_RS06695 b3edcd6c1198d5e6aa1a2a861d3ba315 409 Gene3D G3DSA:1.20.1250.20 211 399 1.8E-15 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Gene3D G3DSA:3.30.70.100 81 151 2.8E-18 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PANTHER PTHR24093 82 783 2.6E-154 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Pfam PF00122 E1-E2 ATPase 269 491 3.7E-54 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Gene3D G3DSA:2.70.150.10 258 400 6.5E-19 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF81665 263 302 2.22E-15 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF81665 400 494 2.22E-15 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF81665 732 766 2.22E-15 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF81653 307 399 6.15E-18 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF55008 79 153 7.85E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 51 2.6E-9 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 781 5.8E-147 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Pfam PF00403 Heavy-metal-associated domain 86 145 6.8E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Gene3D G3DSA:3.40.50.1000 605 747 6.0E-42 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Gene3D G3DSA:3.40.50.1000 474 516 6.0E-42 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 692 5.4E-34 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PANTHER PTHR24093:SF50 82 783 2.6E-154 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 781 4.2E-149 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF56784 498 518 5.38E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 SUPERFAMILY SSF56784 548 779 5.38E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 262 782 4.2E-103 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 698 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 615 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 349 363 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 636 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 702 714 6.7E-17 T 22-04-2016 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 766 8.3E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS01010 4389b4df814ff9907743099ba8fd6efb 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 270 511 5.9E-30 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 11 104 1.1E-16 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 PANTHER PTHR33937:SF1 1 131 4.1E-56 T 22-04-2016 AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 1 119 1.6E-48 T 22-04-2016 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 SUPERFAMILY SSF53146 1 118 1.16E-32 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 PANTHER PTHR33937 1 131 4.1E-56 T 22-04-2016 AMK58_RS04625 32e65ee70583b9295737014467c8d0bb 133 Gene3D G3DSA:3.30.420.130 1 118 1.8E-42 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 395 1.0E-20 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 Pfam PF14821 Threonine synthase N terminus 2 80 1.6E-27 T 22-04-2016 IPR029144 Threonine synthase, N-terminal AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 Gene3D G3DSA:3.40.50.1100 129 201 2.8E-6 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 Gene3D G3DSA:3.90.1380.10 2 85 2.0E-28 T 22-04-2016 IPR029144 Threonine synthase, N-terminal AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314 53 329 6.2E-151 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 Gene3D G3DSA:3.40.50.1100 202 437 2.1E-92 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314 361 468 6.2E-151 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314 25 36 6.2E-151 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 SUPERFAMILY SSF53686 2 461 3.78E-161 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 TIGRFAM TIGR00260 thrC: threonine synthase 69 427 1.6E-79 T 22-04-2016 IPR004450 Threonine synthase-like AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314:SF1 53 329 6.2E-151 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314:SF1 361 468 6.2E-151 T 22-04-2016 AMK58_RS09495 5a85f5db344d84ddba9910725d46b1e6 470 PANTHER PTHR10314:SF1 25 36 6.2E-151 T 22-04-2016 AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 Pfam PF00271 Helicase conserved C-terminal domain 512 579 1.1E-4 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SMART SM00490 487 580 1.2E-4 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SMART SM00487 181 380 1.7E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SUPERFAMILY SSF52540 208 258 2.48E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SUPERFAMILY SSF52540 486 605 2.48E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 TIGRFAM TIGR00595 priA: primosomal protein N' 209 714 5.3E-196 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 Pfam PF00270 DEAD/DEAH box helicase 207 348 8.4E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 Hamap MF_00983 Probable primosomal protein N' [priA]. 1 716 23.79 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SUPERFAMILY SSF52540 182 359 1.08E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 SUPERFAMILY SSF52540 65 76 1.08E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 Gene3D G3DSA:3.40.50.300 444 624 3.2E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 PANTHER PTHR30580 1 717 3.5E-218 T 22-04-2016 AMK58_RS11795 6abf7801f9a8759f2741c8fcf94aa475 717 Gene3D G3DSA:3.40.50.300 184 365 4.9E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 18 104 9.0E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 Pfam PF02033 Ribosome-binding factor A 15 120 3.9E-26 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 14 122 5.4E-19 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 11 127 19.569 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 SUPERFAMILY SSF89919 12 122 6.15E-30 T 22-04-2016 IPR023799 Ribosome-binding factor A domain AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 Gene3D G3DSA:3.30.300.20 13 126 9.3E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 ProSitePatterns PS01319 Ribosome-binding factor A signature. 86 107 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMK58_RS00765 6bc604f4de2caa72f8abace6fc3a0d8a 188 PANTHER PTHR33515 12 163 8.4E-34 T 22-04-2016 AMK58_RS06655 f50306f2fc3ca6f6ad7275edf0edc8ae 214 Gene3D G3DSA:3.40.50.1820 9 208 3.6E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06655 f50306f2fc3ca6f6ad7275edf0edc8ae 214 SUPERFAMILY SSF53474 18 208 4.26E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PANTHER PTHR11451 3 311 1.8E-90 T 22-04-2016 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 463 1.5E-152 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.1E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 SUPERFAMILY SSF52374 3 299 1.15E-108 T 22-04-2016 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Gene3D G3DSA:1.10.1160.10 234 315 5.5E-32 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Gene3D G3DSA:3.40.50.620 2 67 1.2E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Gene3D G3DSA:3.40.50.620 182 231 1.2E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 SUPERFAMILY SSF48163 300 464 3.27E-37 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 PANTHER PTHR11451:SF41 3 311 1.8E-90 T 22-04-2016 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Gene3D G3DSA:3.90.800.10 68 181 4.7E-35 T 22-04-2016 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 465 32.966 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Gene3D G3DSA:1.10.10.350 369 464 1.8E-30 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS06365 61953644fc5130818b2f34995696a49b 470 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 6.0E-92 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS07470 8670180510e9f05d942137cb3ad66f81 322 Pfam PF00781 Diacylglycerol kinase catalytic domain 20 142 1.2E-22 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK58_RS07470 8670180510e9f05d942137cb3ad66f81 322 SUPERFAMILY SSF111331 17 314 2.29E-57 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK58_RS07470 8670180510e9f05d942137cb3ad66f81 322 Gene3D G3DSA:3.40.50.10330 63 133 1.8E-5 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK58_RS07470 8670180510e9f05d942137cb3ad66f81 322 PANTHER PTHR12358 17 322 5.0E-17 T 22-04-2016 AMK58_RS07470 8670180510e9f05d942137cb3ad66f81 322 SMART SM00046 18 146 0.0034 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 Pfam PF02556 Preprotein translocase subunit SecB 15 151 1.1E-52 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 150 1.5E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 29.4 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 21 38 6.1E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 82 102 6.1E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 132 150 6.1E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 106 128 6.1E-26 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 Gene3D G3DSA:3.10.420.10 11 160 2.8E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PANTHER PTHR36918:SF1 1 165 1.3E-46 T 22-04-2016 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 PANTHER PTHR36918 1 165 1.3E-46 T 22-04-2016 AMK58_RS00455 c6a3fb76814edca33ef2b6eb215aceb7 165 SUPERFAMILY SSF54611 10 150 2.83E-47 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 96 7.18E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 76 7.18E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 44 60 7.18E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 Pfam PF01047 MarR family 26 85 2.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 Gene3D G3DSA:1.10.10.10 13 111 4.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 SUPERFAMILY SSF46785 23 111 1.67E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11985 03f881f1a4d87615ef95c071c45a413c 146 SMART SM00347 19 123 4.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 SUPERFAMILY SSF46915 221 318 1.28E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 PANTHER PTHR11252:SF0 1 364 1.4E-178 T 22-04-2016 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Gene3D G3DSA:3.30.230.70 308 355 1.4E-13 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Gene3D G3DSA:3.30.230.70 1 219 2.4E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 236 312 6.1E-13 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Pfam PF01138 3' exoribonuclease family, domain 1 8 138 1.0E-25 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Pfam PF01138 3' exoribonuclease family, domain 1 316 353 2.5E-5 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Gene3D G3DSA:1.10.10.400 220 307 9.3E-17 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 SUPERFAMILY SSF55666 139 228 3.93E-29 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 SUPERFAMILY SSF54211 302 362 5.08E-15 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 Pfam PF03725 3' exoribonuclease family, domain 2 141 205 1.4E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 PANTHER PTHR11252 1 364 1.4E-178 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS28510 1c062420c3365407417398f95f4d8a5e 364 SUPERFAMILY SSF54211 2 138 3.39E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 199 322 1.8E-18 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.30.450.20 313 447 5.2E-12 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF55785 212 323 2.44E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.30.450.20 197 312 2.0E-20 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PANTHER PTHR24423 43 272 4.9E-116 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PANTHER PTHR24423 426 844 4.9E-116 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.40.50.2300 721 844 4.2E-27 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 586 694 5.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Pfam PF00989 PAS fold 203 312 2.3E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF55785 312 461 1.54E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Pfam PF00072 Response regulator receiver domain 723 834 1.6E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00448 721 834 1.4E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF47384 463 541 2.55E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF55785 52 164 1.21E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.30.565.10 546 695 1.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00091 327 394 10.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00091 201 267 1.5E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00091 65 131 3.1E-4 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:1.10.287.130 482 537 1.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00388 476 541 8.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.30.450.20 55 182 4.8E-14 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF55874 532 694 7.99E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SUPERFAMILY SSF52172 721 843 1.71E-27 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 SMART SM00387 585 696 3.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Gene3D G3DSA:3.30.450.20 448 481 4.1E-4 T 22-04-2016 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 Pfam PF13426 PAS domain 77 181 1.3 T 22-04-2016 IPR000014 PAS domain AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 693 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 674 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09715 b3a3cf982b0ab04a28f09684255cbe28 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 2.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS13345 b687cba860b3afc36eacd0af47de5704 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 2.5E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13345 b687cba860b3afc36eacd0af47de5704 315 Gene3D G3DSA:1.10.3720.10 91 303 2.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13345 b687cba860b3afc36eacd0af47de5704 315 PANTHER PTHR30465 1 313 4.9E-112 T 22-04-2016 AMK58_RS13345 b687cba860b3afc36eacd0af47de5704 315 SUPERFAMILY SSF161098 91 297 9.16E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13345 b687cba860b3afc36eacd0af47de5704 315 PANTHER PTHR30465:SF59 1 313 4.9E-112 T 22-04-2016 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 PANTHER PTHR30425 156 460 4.5E-104 T 22-04-2016 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 162 455 2.6E-87 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 SUPERFAMILY SSF161098 177 451 1.64E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 450 9.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 Gene3D G3DSA:1.10.3720.10 166 459 2.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 PANTHER PTHR30425:SF3 156 460 4.5E-104 T 22-04-2016 AMK58_RS01035 eee0301d57d425c6d76f99a14b4d4672 460 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 178 2.4E-33 T 22-04-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 PANTHER PTHR11819:SF13 351 559 4.8E-271 T 22-04-2016 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 PANTHER PTHR11819:SF13 38 330 4.8E-271 T 22-04-2016 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 Pfam PF00474 Sodium:solute symporter family 69 489 4.2E-115 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 69 489 7.6E-62 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 PANTHER PTHR11819 351 559 4.8E-271 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 PANTHER PTHR11819 38 330 4.8E-271 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS12800 76b21a740b42f7da90e518dcd92d7fac 570 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 184 209 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 Gene3D G3DSA:3.40.50.620 348 465 4.7E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 340 480 1.2E-63 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 Pfam PF00294 pfkB family carbohydrate kinase 14 307 7.1E-37 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 SUPERFAMILY SSF53613 16 321 4.05E-56 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 9 318 3.2E-112 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 PANTHER PTHR10584 1 345 1.2E-113 T 22-04-2016 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 54 77 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 Hamap MF_01603 Bifunctional protein HldE [hldE]. 7 481 41.858 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 SUPERFAMILY SSF52374 348 479 4.79E-23 T 22-04-2016 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 Gene3D G3DSA:3.40.1190.20 15 321 6.1E-61 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 Pfam PF01467 Cytidylyltransferase-like 353 445 1.3E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 350 415 1.5E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK58_RS11835 03a22917a8a0326baf6f76fbb296be5b 481 PANTHER PTHR10584:SF159 1 345 1.2E-113 T 22-04-2016 AMK58_RS13440 b4f52b19279090ffc4ab95848d62cf1c 91 Pfam PF13518 Helix-turn-helix domain 31 82 5.0E-12 T 22-04-2016 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SUPERFAMILY SSF47819 566 640 9.59E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Pfam PF00270 DEAD/DEAH box helicase 40 197 3.6E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 PANTHER PTHR13710:SF81 558 640 3.5E-279 T 22-04-2016 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 25 640 1.4E-240 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Pfam PF00271 Helicase conserved C-terminal domain 236 342 7.5E-16 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SMART SM00341 568 641 3.9E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Gene3D G3DSA:1.10.150.80 570 639 1.8E-18 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SMART SM00956 423 526 2.9E-52 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Gene3D G3DSA:3.40.50.300 216 355 1.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 PANTHER PTHR13710:SF81 1 540 3.5E-279 T 22-04-2016 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Pfam PF00570 HRDC domain 572 638 7.7E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SMART SM00490 261 342 1.1E-26 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 25 475 1.7E-153 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SUPERFAMILY SSF52540 218 465 1.46E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SMART SM00487 32 228 4.6E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 PANTHER PTHR13710 1 540 3.5E-279 T 22-04-2016 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 PANTHER PTHR13710 558 640 3.5E-279 T 22-04-2016 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Gene3D G3DSA:1.10.10.10 356 530 2.9E-60 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Gene3D G3DSA:3.40.50.300 23 211 9.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 SUPERFAMILY SSF52540 22 207 1.09E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Pfam PF09382 RQC domain 418 527 1.0E-39 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AMK58_RS12905 46b19cb947db2c36ddff2d6804194601 642 Pfam PF16124 RecQ zinc-binding 354 416 8.1E-19 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 PANTHER PTHR24220 11 256 1.4E-75 T 22-04-2016 AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 Pfam PF00005 ABC transporter 31 172 4.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 SUPERFAMILY SSF52540 7 237 5.43E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 Gene3D G3DSA:3.40.50.300 6 236 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 PANTHER PTHR24220:SF432 11 256 1.4E-75 T 22-04-2016 AMK58_RS12340 39f42b1d1b920ba44a4ad3e6f864b225 266 SMART SM00382 39 221 2.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 PIRSF PIRSF039137 1 235 2.7E-103 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 SUPERFAMILY SSF52540 2 232 1.05E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 PANTHER PTHR24220:SF568 3 233 8.2E-130 T 22-04-2016 AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 SMART SM00382 26 213 3.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 Pfam PF00005 ABC transporter 17 161 5.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 PANTHER PTHR24220 3 233 8.2E-130 T 22-04-2016 AMK58_RS07265 86581767dfaf7ce5fbf8a36e2435bd3b 236 Gene3D G3DSA:3.40.50.300 1 230 6.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08690 21e8d31761135da308eb73ba713db153 97 Gene3D G3DSA:2.20.28.10 43 95 7.0E-18 T 22-04-2016 IPR004039 Rubredoxin-type fold AMK58_RS08690 21e8d31761135da308eb73ba713db153 97 SUPERFAMILY SSF57802 51 96 7.07E-14 T 22-04-2016 AMK58_RS08690 21e8d31761135da308eb73ba713db153 97 Pfam PF00301 Rubredoxin 51 92 3.8E-14 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 AMK58_RS08690 21e8d31761135da308eb73ba713db153 97 ProSitePatterns PS00202 Rubredoxin signature. 76 86 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 PANTHER PTHR30600:SF7 27 318 3.1E-120 T 22-04-2016 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 SUPERFAMILY SSF46626 177 328 3.35E-43 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 Pfam PF03150 Di-haem cytochrome c peroxidase 44 190 5.4E-54 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 Gene3D G3DSA:1.10.760.10 35 181 8.3E-52 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 SUPERFAMILY SSF46626 24 178 7.64E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 Gene3D G3DSA:1.10.760.10 182 323 1.1E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 PANTHER PTHR30600 27 318 3.1E-120 T 22-04-2016 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 PIRSF PIRSF000294 2 332 5.8E-131 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AMK58_RS13175 4f734510c6c136023ea3dca817a6288f 334 Pfam PF00034 Cytochrome c 199 308 7.5E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 105 2.8E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 Pfam PF00085 Thioredoxin 5 105 1.4E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 Gene3D G3DSA:3.40.30.10 2 106 1.5E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 PIRSF PIRSF000077 1 107 2.5E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 PANTHER PTHR10438 5 107 1.1E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 PRINTS PR00421 Thioredoxin family signature 31 40 2.3E-10 T 22-04-2016 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 PRINTS PR00421 Thioredoxin family signature 23 31 2.3E-10 T 22-04-2016 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 PRINTS PR00421 Thioredoxin family signature 71 82 2.3E-10 T 22-04-2016 AMK58_RS01550 a56c08861d35402c4916fe83e838ca0a 107 SUPERFAMILY SSF52833 2 107 5.2E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS24505 8d5a29207021f098b4c587580e02cca4 116 Gene3D G3DSA:3.40.50.410 4 106 1.1E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS24505 8d5a29207021f098b4c587580e02cca4 116 SUPERFAMILY SSF53300 5 112 2.97E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 PANTHER PTHR30108 1 188 7.2E-99 T 22-04-2016 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 Pfam PF02441 Flavoprotein 6 129 2.5E-25 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 186 6.9E-73 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 SUPERFAMILY SSF52507 6 188 7.72E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 PANTHER PTHR30108:SF10 1 188 7.2E-99 T 22-04-2016 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 188 37.315 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 AMK58_RS05170 3193131cba45474917457fcbc24ed233 197 Gene3D G3DSA:3.40.50.1950 6 190 1.1E-79 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 SMART SM01118 8 212 4.3E-30 T 22-04-2016 IPR023577 CYTH domain AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 PANTHER PTHR39569 8 520 1.3E-46 T 22-04-2016 AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 PANTHER PTHR39569:SF1 8 520 1.3E-46 T 22-04-2016 AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 Pfam PF05235 CHAD domain 238 478 2.2E-57 T 22-04-2016 IPR007899 CHAD domain AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 Gene3D G3DSA:2.40.320.10 9 215 7.0E-33 T 22-04-2016 IPR023577 CYTH domain AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 SMART SM00880 237 513 3.5E-75 T 22-04-2016 IPR007899 CHAD domain AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 SUPERFAMILY SSF55154 8 217 1.13E-37 T 22-04-2016 IPR033469 CYTH-like domain AMK58_RS11870 d7506d1e1e9770c748a667670891201c 535 Pfam PF01928 CYTH domain 8 206 9.1E-23 T 22-04-2016 IPR023577 CYTH domain AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 48 503 7.1E-147 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Gene3D G3DSA:2.40.10.10 46 177 9.0E-32 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SUPERFAMILY SSF50156 252 377 2.5E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PANTHER PTHR22939 103 431 1.2E-112 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PANTHER PTHR22939 9 69 1.2E-112 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Gene3D G3DSA:2.30.42.10 296 391 5.4E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Gene3D G3DSA:2.30.42.10 414 510 9.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Pfam PF13365 Trypsin-like peptidase domain 121 255 1.2E-33 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Gene3D G3DSA:2.40.10.10 184 295 8.0E-47 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PANTHER PTHR22939:SF79 103 431 1.2E-112 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PANTHER PTHR22939:SF79 9 69 1.2E-112 T 22-04-2016 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SUPERFAMILY SSF50494 108 291 1.17E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SUPERFAMILY SSF50494 46 70 1.17E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 7.6E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SUPERFAMILY SSF50156 413 507 6.31E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Pfam PF13180 PDZ domain 294 385 6.8E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 Pfam PF13180 PDZ domain 414 504 1.9E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SMART SM00228 294 376 2.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07215 f5c5f241c5317e7630cadb00c3798d46 512 SMART SM00228 413 498 3.2E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 Gene3D G3DSA:1.10.287.130 338 405 1.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 5.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 5.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 518 5.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 5.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 SUPERFAMILY SSF55874 399 563 3.54E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 SMART SM00388 345 410 5.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PANTHER PTHR24423 324 577 1.4E-65 T 22-04-2016 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 564 1.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 Pfam PF03924 CHASE domain 64 252 9.6E-63 T 22-04-2016 IPR006189 CHASE domain AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 PANTHER PTHR24423:SF479 324 577 1.4E-65 T 22-04-2016 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 Gene3D G3DSA:3.30.565.10 414 567 3.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 SMART SM00387 454 565 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 SUPERFAMILY SSF47384 330 410 9.81E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 345 410 1.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS11535 086c3704fcc6b5b5832bf9d7dd7cb480 579 SMART SM01079 61 254 9.8E-79 T 22-04-2016 IPR006189 CHASE domain AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 PANTHER PTHR31223 1 183 1.5E-75 T 22-04-2016 AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 6 179 1.7E-60 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 SUPERFAMILY SSF102405 4 179 6.87E-63 T 22-04-2016 AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 Pfam PF03641 Possible lysine decarboxylase 49 178 3.2E-44 T 22-04-2016 IPR031100 LOG family AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 PANTHER PTHR31223:SF0 1 183 1.5E-75 T 22-04-2016 AMK58_RS09935 e2c562c2d72189c3f48c2c2ec8de3d44 194 Gene3D G3DSA:3.40.50.450 3 183 1.1E-67 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:1.20.1220.12 587 721 7.1E-78 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 PANTHER PTHR21631 499 722 1.6E-150 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 PANTHER PTHR21631 35 41 1.6E-150 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 PANTHER PTHR21631:SF7 35 41 1.6E-150 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:3.20.20.360 89 135 6.4E-151 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:3.20.20.360 266 296 6.4E-151 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:3.20.20.360 336 586 6.4E-151 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:2.170.170.11 298 335 3.4E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:2.170.170.11 136 264 3.4E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 415.485 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 PANTHER PTHR21631:SF7 499 722 1.6E-150 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 720 0.0 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Gene3D G3DSA:1.10.1860.10 2 88 8.5E-37 T 22-04-2016 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 SUPERFAMILY SSF51645 2 720 0.0 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS04515 0183e52fabc369885c741ae5083528df 723 Pfam PF01274 Malate synthase 18 695 1.0E-181 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 493 9.0E-172 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PANTHER PTHR11236:SF9 1 492 1.7E-217 T 22-04-2016 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PANTHER PTHR11236 1 492 1.7E-217 T 22-04-2016 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 Pfam PF00425 chorismate binding enzyme 232 485 2.8E-98 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PRINTS PR00095 Anthranilate synthase component I signature 427 441 1.4E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PRINTS PR00095 Anthranilate synthase component I signature 442 456 1.4E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PRINTS PR00095 Anthranilate synthase component I signature 333 346 1.4E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 PRINTS PR00095 Anthranilate synthase component I signature 347 360 1.4E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 SUPERFAMILY SSF56322 19 493 2.62E-153 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 176 9.1E-30 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06430 ed69ec9dd85a3303b044dfa386801653 503 Gene3D G3DSA:3.60.120.10 17 494 7.6E-169 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 127 6.6E-22 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 SUPERFAMILY SSF54593 4 130 1.3E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 73 85 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 131 6.6E-60 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 Gene3D G3DSA:3.10.180.10 1 130 1.9E-45 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 PANTHER PTHR10374 1 129 1.3E-55 T 22-04-2016 AMK58_RS06335 bb98a4ceb5885739eabd3c90c9487d28 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK58_RS05350 91a65baf0e6b01f76b562fae584d1d0f 335 SMART SM00448 9 125 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05350 91a65baf0e6b01f76b562fae584d1d0f 335 Pfam PF00072 Response regulator receiver domain 11 125 2.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05350 91a65baf0e6b01f76b562fae584d1d0f 335 Gene3D G3DSA:3.40.50.2300 8 141 3.2E-31 T 22-04-2016 AMK58_RS05350 91a65baf0e6b01f76b562fae584d1d0f 335 SUPERFAMILY SSF52172 8 137 1.85E-32 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS05350 91a65baf0e6b01f76b562fae584d1d0f 335 PANTHER PTHR26402 9 129 1.2E-30 T 22-04-2016 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Gene3D G3DSA:3.40.50.300 814 976 1.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Gene3D G3DSA:3.40.50.300 603 799 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SMART SM01058 493 589 4.6E-42 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF52540 795 1003 1.38E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1120 28.528 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF52540 537 797 5.63E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1097 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Pfam PF02559 CarD-like/TRCF domain 495 587 9.8E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF52540 362 482 5.84E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SMART SM00982 1024 1124 5.6E-43 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SMART SM00490 839 923 5.5E-20 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Pfam PF00271 Helicase conserved C-terminal domain 818 922 4.2E-19 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF143517 1013 1163 3.79E-42 T 22-04-2016 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Pfam PF03461 TRCF domain 1027 1118 5.5E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF52540 10 354 1.31E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Gene3D G3DSA:3.30.2060.10 138 207 3.7E-12 T 22-04-2016 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 Pfam PF00270 DEAD/DEAH box helicase 618 779 2.2E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SUPERFAMILY SSF141259 485 561 1.96E-21 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 PANTHER PTHR14025:SF21 400 1158 0.0 T 22-04-2016 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 PANTHER PTHR14025 400 1158 0.0 T 22-04-2016 AMK58_RS08565 4d9c7ce6435a62f6a12a486944c9c541 1208 SMART SM00487 613 803 4.6E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 1.3E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 SUPERFAMILY SSF55785 17 131 1.52E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 SMART SM00387 275 387 1.7E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 SMART SM00091 17 85 2.1E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 Gene3D G3DSA:1.10.287.130 145 227 1.7E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 PANTHER PTHR24423 15 383 5.2E-54 T 22-04-2016 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 383 2.9E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 2.43E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 384 2.43E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 2.43E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 SUPERFAMILY SSF47384 144 231 2.16E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 SUPERFAMILY SSF55874 221 383 3.67E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 Gene3D G3DSA:3.30.450.20 19 131 5.8E-13 T 22-04-2016 AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 Gene3D G3DSA:3.30.565.10 232 383 8.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04145 6c1876f4aca0fee942b6d7bdf08d068c 391 Pfam PF00989 PAS fold 20 98 5.0E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 Gene3D G3DSA:3.90.1150.10 269 385 3.4E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 Gene3D G3DSA:3.40.640.10 52 268 2.7E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 Pfam PF00155 Aminotransferase class I and II 36 380 1.9E-36 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 PANTHER PTHR11751:SF294 1 380 9.1E-119 T 22-04-2016 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 PANTHER PTHR11751 1 380 9.1E-119 T 22-04-2016 AMK58_RS05515 6b44410394ae0d543bd5159497bf60a5 389 SUPERFAMILY SSF53383 3 385 2.24E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PIRSF PIRSF000094 8 261 8.7E-94 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 Gene3D G3DSA:3.40.50.720 10 259 6.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 258 6.5E-86 T 22-04-2016 AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PANTHER PTHR24322 165 197 6.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PANTHER PTHR24322 20 149 6.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PANTHER PTHR24322:SF317 165 197 6.8E-50 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 PANTHER PTHR24322:SF317 20 149 6.8E-50 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS07120 87b651cc8f4ecef054747599fbfa4fef 261 SUPERFAMILY SSF51735 12 260 1.79E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.46E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.46E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 Pfam PF16859 Bacterial transcriptional repressor C-terminal 95 180 7.9E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 PANTHER PTHR30055 9 180 4.3E-37 T 22-04-2016 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 Gene3D G3DSA:1.10.357.10 9 207 1.1E-48 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 SUPERFAMILY SSF48498 89 208 9.92E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 PANTHER PTHR30055:SF27 9 180 4.3E-37 T 22-04-2016 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.2E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS04770 3e77449524415f69f21b3098738a3c86 216 SUPERFAMILY SSF46689 9 88 6.98E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS07650 0856e99e27f55d1562dd2151ca6e9544 144 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 67 120 1.0E-17 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK58_RS07650 0856e99e27f55d1562dd2151ca6e9544 144 SUPERFAMILY SSF141734 20 129 5.62E-48 T 22-04-2016 AMK58_RS07650 0856e99e27f55d1562dd2151ca6e9544 144 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 18 121 31.72 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK58_RS07650 0856e99e27f55d1562dd2151ca6e9544 144 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 44 117 1.5E-35 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK58_RS07650 0856e99e27f55d1562dd2151ca6e9544 144 PANTHER PTHR21256 11 131 4.4E-59 T 22-04-2016 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 Hamap MF_00268 Protein RecA [recA]. 16 341 51.993 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 177 206 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 222 250 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 139 168 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 255 284 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 309 326 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PRINTS PR00142 RecA protein signature 105 134 1.6E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 ProSitePatterns PS00321 recA signature. 225 233 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 Gene3D G3DSA:3.40.50.300 44 279 6.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 4.0E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PANTHER PTHR22942 9 347 1.1E-201 T 22-04-2016 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 SUPERFAMILY SSF52540 16 279 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 Pfam PF00154 recA bacterial DNA recombination protein 18 280 2.5E-147 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 SMART SM00382 69 240 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 Gene3D G3DSA:3.30.250.10 280 336 1.5E-26 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 PANTHER PTHR22942:SF1 9 347 1.1E-201 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK58_RS10040 f74565a9ec41bb8646ca16cf81ad22a9 359 SUPERFAMILY SSF54752 280 337 6.15E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 303 2.8E-120 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 292 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 SUPERFAMILY SSF52210 249 303 2.22E-20 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 PANTHER PTHR11815 2 303 2.8E-171 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 Gene3D G3DSA:3.30.470.20 106 249 2.7E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 PIRSF PIRSF001554 2 303 1.6E-115 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 Gene3D G3DSA:3.40.50.261 251 303 1.3E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 Gene3D G3DSA:3.30.1490.20 23 105 5.8E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 SUPERFAMILY SSF56059 2 248 2.79E-83 T 22-04-2016 AMK58_RS20585 789d5823b6a1e2064517e2f56da9f17d 303 Pfam PF08442 ATP-grasp domain 3 212 3.3E-78 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 SUPERFAMILY SSF48557 7 466 1.02E-164 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Gene3D G3DSA:1.10.275.10 6 141 2.3E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 8.3E-37 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 8.3E-37 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 8.3E-37 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 8.3E-37 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 7 465 92.804 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 8.9E-8 T 22-04-2016 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 8.9E-8 T 22-04-2016 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 8.9E-8 T 22-04-2016 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PANTHER PTHR11444 1 466 2.7E-267 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 PANTHER PTHR11444:SF1 1 466 2.7E-267 T 22-04-2016 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Pfam PF00206 Lyase 15 345 4.4E-119 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 7 464 3.9E-237 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Gene3D G3DSA:1.10.40.30 408 466 7.0E-34 T 22-04-2016 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Pfam PF10415 Fumarase C C-terminus 411 463 1.5E-27 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS05100 eddce2ee20f756884a1bce76357f2ca3 466 Gene3D G3DSA:1.20.200.10 142 406 1.7E-112 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 Gene3D G3DSA:2.40.30.10 211 295 7.8E-4 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PANTHER PTHR10617:SF103 7 314 5.0E-52 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PANTHER PTHR10617:SF103 346 409 5.0E-52 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 18 407 9.3E-89 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 SUPERFAMILY SSF160996 210 354 1.57E-13 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 40 413 1.8E-147 T 22-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 SUPERFAMILY SSF51905 353 413 9.82E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 SUPERFAMILY SSF51905 17 207 9.82E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 Gene3D G3DSA:3.50.50.60 355 411 6.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 Gene3D G3DSA:3.50.50.60 16 203 6.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PANTHER PTHR10617 7 314 5.0E-52 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PANTHER PTHR10617 346 409 5.0E-52 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PRINTS PR00419 Adrenodoxin reductase family signature 17 39 1.6E-6 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 PRINTS PR00419 Adrenodoxin reductase family signature 40 53 1.6E-6 T 22-04-2016 AMK58_RS13160 dbae94a0779426c8d373a0a3eeddc0d6 415 Pfam PF03486 HI0933-like protein 17 407 4.3E-104 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 138 7.5E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 PANTHER PTHR10799 175 284 1.2E-27 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 SUPERFAMILY SSF55785 20 138 2.51E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 PANTHER PTHR10799 2 138 1.2E-27 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 SUPERFAMILY SSF55073 147 283 5.73E-38 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 Gene3D G3DSA:3.30.450.20 3 131 7.1E-15 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 283 4.8E-39 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 283 2.7E-34 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 Gene3D G3DSA:3.30.70.270 144 283 2.4E-43 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 PANTHER PTHR10799:SF774 2 138 1.2E-27 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 PANTHER PTHR10799:SF774 175 284 1.2E-27 T 22-04-2016 AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 SMART SM00091 9 75 7.1E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 SMART SM00267 131 284 4.9E-40 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS16715 caa19f290c181bc0946aaaf84cbdd46e 284 Pfam PF08448 PAS fold 16 131 3.2E-10 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 133 5.4E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 9.87E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 9.87E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 9.87E-9 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 136 24.716 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 132 4.8E-42 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 PANTHER PTHR30266:SF2 1 147 1.4E-49 T 22-04-2016 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 PANTHER PTHR30266 1 147 1.4E-49 T 22-04-2016 AMK58_RS12875 3b232561f3040c872ba56e7b7addc001 148 SUPERFAMILY SSF81330 11 129 2.48E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 Gene3D G3DSA:3.40.50.620 1 181 1.3E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 PANTHER PTHR22749 1 313 1.2E-115 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 Pfam PF01687 Riboflavin kinase 185 310 1.7E-36 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 Pfam PF06574 FAD synthetase 12 166 1.9E-52 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 SMART SM00904 184 311 1.7E-60 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 PIRSF PIRSF004491 1 317 2.5E-97 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 PANTHER PTHR22749:SF0 1 313 1.2E-115 T 22-04-2016 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 310 1.1E-80 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 Gene3D G3DSA:2.40.30.30 182 313 5.6E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 SUPERFAMILY SSF52374 17 178 7.88E-33 T 22-04-2016 AMK58_RS10965 7488c9f70dfaeaee500d264f2cb444a3 318 SUPERFAMILY SSF82114 175 313 6.98E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK58_RS10185 056bd058e26b07114c02d3a0a45136f0 138 Pfam PF10768 Class II flagellar assembly regulator 1 136 2.8E-40 T 22-04-2016 IPR019704 Flagellar assembly regulator FliX, class II AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PIRSF PIRSF000532 3 361 1.7E-120 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 5 360 40.33 T 22-04-2016 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 SUPERFAMILY SSF53784 4 352 2.49E-102 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 108 124 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 154 172 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 192 209 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 136 153 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 275 297 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 228 240 1.9E-68 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 Gene3D G3DSA:3.40.50.450 4 225 1.8E-61 T 22-04-2016 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 Pfam PF00365 Phosphofructokinase 6 311 1.5E-95 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05135 99f88c22b088d1b5c3c4c5676ac04c83 361 PANTHER PTHR13697 5 338 2.0E-97 T 22-04-2016 AMK58_RS10105 ad39b75784807bd495858a1b59566c2f 632 PANTHER PTHR30540 15 562 1.5E-239 T 22-04-2016 AMK58_RS10105 ad39b75784807bd495858a1b59566c2f 632 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 12 632 34.793 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup AMK58_RS10105 ad39b75784807bd495858a1b59566c2f 632 Pfam PF02705 K+ potassium transporter 21 553 1.1E-215 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMK58_RS10105 ad39b75784807bd495858a1b59566c2f 632 PANTHER PTHR30540:SF7 15 562 1.5E-239 T 22-04-2016 AMK58_RS01725 bb0d3350cfdaca401caf5877d7d2301d 249 SUPERFAMILY SSF54001 23 235 5.97E-30 T 22-04-2016 AMK58_RS01725 bb0d3350cfdaca401caf5877d7d2301d 249 SMART SM00645 26 241 7.7E-5 T 22-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AMK58_RS01725 bb0d3350cfdaca401caf5877d7d2301d 249 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 199 209 - T 22-04-2016 IPR025660 Cysteine peptidase, histidine active site AMK58_RS01725 bb0d3350cfdaca401caf5877d7d2301d 249 Pfam PF00112 Papain family cysteine protease 27 233 9.7E-14 T 22-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AMK58_RS01725 bb0d3350cfdaca401caf5877d7d2301d 249 Gene3D G3DSA:3.90.70.10 27 235 1.8E-27 T 22-04-2016 AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 SUPERFAMILY SSF52540 245 538 4.98E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 SUPERFAMILY SSF52540 139 209 4.98E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 Gene3D G3DSA:3.40.50.300 374 537 4.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 Gene3D G3DSA:3.40.50.300 143 223 4.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 Pfam PF01935 Domain of unknown function DUF87 139 414 8.1E-48 T 22-04-2016 IPR002789 Helicase HerA, central domain AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 PANTHER PTHR30121:SF2 30 558 1.3E-75 T 22-04-2016 IPR008571 Helicase HerA AMK58_RS01825 0cbebf0c8f4594a3a53e7ae6a8f141d9 561 PANTHER PTHR30121 30 558 1.3E-75 T 22-04-2016 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 92 245 1.5E-36 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 SUPERFAMILY SSF55174 24 81 2.35E-14 T 22-04-2016 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 SMART SM00363 27 85 4.0E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 Gene3D G3DSA:3.10.290.10 26 89 3.4E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 SUPERFAMILY SSF55120 85 242 7.55E-35 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 Pfam PF00849 RNA pseudouridylate synthase 91 220 1.7E-11 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 Pfam PF01479 S4 domain 27 73 5.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 125 139 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 PANTHER PTHR21600 25 255 7.2E-66 T 22-04-2016 AMK58_RS11305 66716d209d8c5b304f915693c92e3199 408 PANTHER PTHR21600:SF2 25 255 7.2E-66 T 22-04-2016 AMK58_RS10435 237fd1596eea1df74dbdc03547de9e93 237 Gene3D G3DSA:3.40.50.880 8 215 2.3E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS10435 237fd1596eea1df74dbdc03547de9e93 237 SUPERFAMILY SSF52317 8 187 4.92E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS10435 237fd1596eea1df74dbdc03547de9e93 237 PANTHER PTHR11019 1 160 3.6E-37 T 22-04-2016 AMK58_RS10435 237fd1596eea1df74dbdc03547de9e93 237 PANTHER PTHR11019:SF25 1 160 3.6E-37 T 22-04-2016 AMK58_RS10435 237fd1596eea1df74dbdc03547de9e93 237 Pfam PF01965 DJ-1/PfpI family 10 166 8.4E-25 T 22-04-2016 IPR002818 DJ-1/PfpI AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PANTHER PTHR11717 1 155 4.3E-58 T 22-04-2016 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 SMART SM00226 2 151 2.0E-58 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 149 2.1E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 SUPERFAMILY SSF52788 1 152 2.09E-51 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PANTHER PTHR11717:SF7 1 155 4.3E-58 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 Gene3D G3DSA:3.40.50.270 1 155 6.5E-57 T 22-04-2016 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 1.5E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.5E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 104 117 1.5E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 1.5E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS01450 c6e8dd24a2e72154c7b68968e36bf1ba 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 1.5E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 SUPERFAMILY SSF46689 238 286 7.17E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 SUPERFAMILY SSF51215 49 171 3.4E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 Gene3D G3DSA:1.10.10.60 238 285 3.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 Pfam PF12833 Helix-turn-helix domain 209 284 4.1E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 SMART SM00342 202 284 9.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS07450 86768da66e3180e51bf6b18ffd0040e9 288 PANTHER PTHR11019 12 288 6.4E-22 T 22-04-2016 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 208.321 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Gene3D G3DSA:3.40.440.10 1 93 3.5E-68 T 22-04-2016 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Gene3D G3DSA:3.40.440.10 196 265 3.5E-68 T 22-04-2016 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 PANTHER PTHR11846 2 427 2.1E-225 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 SMART SM00788 3 423 7.9E-283 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Gene3D G3DSA:3.90.170.10 266 424 1.7E-68 T 22-04-2016 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Gene3D G3DSA:1.10.300.10 103 195 1.7E-30 T 22-04-2016 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 1.8E-159 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 SUPERFAMILY SSF52540 1 424 2.02E-169 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09630 53f34a1f16bb7be694730f20fd653ec3 430 Pfam PF00709 Adenylosuccinate synthetase 4 422 8.6E-170 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 Gene3D G3DSA:2.70.210.12 2 155 7.7E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 SUPERFAMILY SSF82051 2 158 3.14E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 Pfam PF01018 GTP1/OBG 3 158 1.4E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 326 1.3E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PANTHER PTHR11702 1 386 8.7E-146 T 22-04-2016 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PIRSF PIRSF002401 1 363 4.8E-127 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 Gene3D G3DSA:3.40.50.300 160 333 7.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.821 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 SUPERFAMILY SSF52540 150 334 1.48E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 Pfam PF01926 50S ribosome-binding GTPase 163 278 2.0E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS11675 ea65feaad1e66a482c48b23933e41519 407 PANTHER PTHR11702:SF3 1 386 8.7E-146 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.851 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 Pfam PF00953 Glycosyl transferase family 4 100 285 6.5E-33 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 PANTHER PTHR22926 2 361 5.0E-166 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 PANTHER PTHR22926:SF5 2 361 5.0E-166 T 22-04-2016 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 ProSitePatterns PS01347 MraY family signature 1. 69 81 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 39 361 6.2E-131 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03940 e01df1a425102b41a5c2dd03bc3f4589 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 69 81 5.6E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS05575 c6231f03e3d939e3086281090417fcfe 223 PANTHER PTHR30086 10 218 1.2E-46 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS05575 c6231f03e3d939e3086281090417fcfe 223 PANTHER PTHR30086:SF6 10 218 1.2E-46 T 22-04-2016 AMK58_RS05575 c6231f03e3d939e3086281090417fcfe 223 Pfam PF01810 LysE type translocator 22 207 1.6E-19 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PANTHER PTHR11451:SF31 9 640 0.0 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.10.20.30 9 70 2.0E-20 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 79 640 2.5E-209 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 73 643 33.646 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 SMART SM00863 176 226 1.8E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 SUPERFAMILY SSF55186 71 248 4.84E-64 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 SUPERFAMILY SSF52954 536 640 1.39E-28 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 371 394 1.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 516 529 1.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 543 555 1.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 338 366 1.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 473 501 1.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 176 226 9.9E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Pfam PF02824 TGS domain 9 68 5.1E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.30.980.10 73 136 7.0E-41 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.30.980.10 194 230 7.0E-41 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.40.50.800 540 641 4.2E-29 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 538 1.8E-43 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.30.54.20 138 192 1.3E-23 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Gene3D G3DSA:3.30.930.10 249 539 6.7E-116 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 SUPERFAMILY SSF55681 250 535 4.98E-98 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 PANTHER PTHR11451 9 640 0.0 T 22-04-2016 AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 Pfam PF03129 Anticodon binding domain 550 639 3.8E-17 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS03025 e0cc5025795cfe2be3e40cb257500c32 654 SUPERFAMILY SSF81271 9 68 4.58E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK58_RS07760 b0e6d0afeab19cccbd263d50d6edf165 224 PRINTS PR00806 Vinculin signature 46 59 7.8E-6 T 22-04-2016 AMK58_RS07760 b0e6d0afeab19cccbd263d50d6edf165 224 PRINTS PR00806 Vinculin signature 31 41 7.8E-6 T 22-04-2016 AMK58_RS07760 b0e6d0afeab19cccbd263d50d6edf165 224 Pfam PF10691 Protein of unknown function (DUF2497) 145 219 3.6E-24 T 22-04-2016 IPR019632 Protein of unknown function DUF2497 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PANTHER PTHR30295 1 154 8.2E-52 T 22-04-2016 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PIRSF PIRSF002560 1 157 3.4E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 Pfam PF00210 Ferritin-like domain 9 144 1.1E-38 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 SUPERFAMILY SSF47240 1 154 6.37E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PANTHER PTHR30295:SF9 1 154 8.2E-52 T 22-04-2016 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 128 149 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 107 127 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 65 85 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 44 64 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 23 43 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 3 22 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 PRINTS PR00601 Bacterioferritin signature 86 106 4.97E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 Gene3D G3DSA:1.20.1260.10 1 155 1.6E-60 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS08865 2286c89a50adc0930b16450e6d3ae25f 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.2E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS07500 7bf399b0d9d002259cdede2903b807d2 295 PANTHER PTHR11795:SF379 10 294 2.5E-131 T 22-04-2016 AMK58_RS07500 7bf399b0d9d002259cdede2903b807d2 295 PANTHER PTHR11795 10 294 2.5E-131 T 22-04-2016 AMK58_RS07500 7bf399b0d9d002259cdede2903b807d2 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 1.8E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 203 33.668 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 SUPERFAMILY SSF52218 1 204 5.8E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 PANTHER PTHR10204 1 203 8.0E-75 T 22-04-2016 AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 Pfam PF02525 Flavodoxin-like fold 1 201 1.3E-49 T 22-04-2016 IPR003680 Flavodoxin-like fold AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 Gene3D G3DSA:3.40.50.360 1 203 1.5E-67 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK58_RS04695 e5621c11ee736bf4d4c6163f69ae8d92 208 PANTHER PTHR10204:SF37 1 203 8.0E-75 T 22-04-2016 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 SMART SM00448 5 118 7.7E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 Gene3D G3DSA:1.10.10.10 137 236 1.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 Gene3D G3DSA:3.40.50.2300 3 125 6.2E-45 T 22-04-2016 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 SUPERFAMILY SSF52172 3 126 5.12E-45 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 Pfam PF00072 Response regulator receiver domain 8 119 2.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 SUPERFAMILY SSF46894 139 235 1.87E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 PANTHER PTHR26402:SF528 5 238 9.7E-110 T 22-04-2016 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 SMART SM00862 158 234 2.2E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 234 7.4E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS01600 9392696eae276f4a6d843028200bb0ab 241 PANTHER PTHR26402 5 238 9.7E-110 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PRINTS PR00046 Major sigma-70 factor signature 467 475 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PRINTS PR00046 Major sigma-70 factor signature 591 603 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PRINTS PR00046 Major sigma-70 factor signature 627 638 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PRINTS PR00046 Major sigma-70 factor signature 612 627 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PRINTS PR00046 Major sigma-70 factor signature 443 456 3.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF04542 Sigma-70 region 2 419 488 1.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 SUPERFAMILY SSF88659 549 651 1.18E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 SUPERFAMILY SSF88946 130 486 9.58E-98 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Gene3D G3DSA:1.10.601.10 127 488 1.1E-128 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Gene3D G3DSA:1.10.10.10 581 652 7.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 415 640 3.7E-39 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 12 652 43.864 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Gene3D G3DSA:1.10.10.10 492 543 3.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 612 638 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF04539 Sigma-70 region 3 498 573 2.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 SUPERFAMILY SSF88659 492 565 1.87E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PANTHER PTHR30603 5 167 1.4E-232 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PANTHER PTHR30603 366 652 1.4E-232 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PANTHER PTHR30603:SF0 5 167 1.4E-232 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 PANTHER PTHR30603:SF0 366 652 1.4E-232 T 22-04-2016 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF03979 Sigma-70 factor, region 1.1 30 89 9.7E-23 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF04545 Sigma-70, region 4 587 640 2.8E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF04546 Sigma-70, non-essential region 155 385 1.3E-52 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 415 651 3.9E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 443 456 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09850 c4cbdc40935bcf8339d5caece1cd6eaa 653 Pfam PF00140 Sigma-70 factor, region 1.2 113 145 9.7E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 Pfam PF00281 Ribosomal protein L5 25 81 4.0E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 PANTHER PTHR11994 1 178 1.8E-94 T 22-04-2016 AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 Gene3D G3DSA:3.30.1440.10 3 178 5.8E-80 T 22-04-2016 IPR022803 Ribosomal protein L5 domain AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.717 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 6.1E-43 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 PIRSF PIRSF002161 1 180 1.3E-69 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10345 f3f0025ff5024f41b3c779bb812a9983 180 SUPERFAMILY SSF55282 4 179 4.0E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 Gene3D G3DSA:3.20.20.450 317 550 8.0E-62 T 22-04-2016 IPR001633 EAL domain AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 SUPERFAMILY SSF55785 25 119 2.09E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 PANTHER PTHR33121 317 546 1.3E-50 T 22-04-2016 AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 SUPERFAMILY SSF141868 316 547 1.57E-62 T 22-04-2016 IPR001633 EAL domain AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 PANTHER PTHR33121:SF10 317 546 1.3E-50 T 22-04-2016 AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 SMART SM00052 310 551 1.6E-58 T 22-04-2016 IPR001633 EAL domain AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 Gene3D G3DSA:3.30.450.20 37 120 2.0E-6 T 22-04-2016 AMK58_RS05115 e24882211899ff5c89fbc4a999b2d2fe 571 Pfam PF00563 EAL domain 317 546 4.8E-57 T 22-04-2016 IPR001633 EAL domain AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 Gene3D G3DSA:3.40.50.960 3 148 1.9E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 SUPERFAMILY SSF52121 3 149 5.76E-47 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 149 23.346 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 8 144 7.4E-30 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 6 146 3.0E-42 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08310 b6b79a34eb15c623ab906011b4b8c395 154 PANTHER PTHR21058 7 154 6.3E-39 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 42 113 5.1E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 SMART SM00829 25 215 3.0E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 16 216 2.4E-97 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 Gene3D G3DSA:3.90.180.10 16 212 1.5E-67 T 22-04-2016 IPR011032 GroES-like AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 SUPERFAMILY SSF51735 127 216 2.56E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 Pfam PF00107 Zinc-binding dehydrogenase 166 217 9.6E-15 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 PANTHER PTHR11695 30 217 5.2E-88 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 PANTHER PTHR11695:SF610 30 217 5.2E-88 T 22-04-2016 AMK58_RS18900 d113b69b2ba17e393406b8b6e09ea44a 217 SUPERFAMILY SSF50129 16 155 2.59E-37 T 22-04-2016 IPR011032 GroES-like AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 3.3E-37 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 SUPERFAMILY SSF50129 1 95 2.64E-36 T 22-04-2016 IPR011032 GroES-like AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 Gene3D G3DSA:2.30.33.40 1 95 5.2E-40 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 PANTHER PTHR10772 1 95 2.1E-48 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.5E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.5E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.5E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.5E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.403 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS13190 b90b29350f701ff702611bdd574876e6 96 SMART SM00883 2 94 3.3E-61 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 SUPERFAMILY SSF53850 33 256 8.54E-38 T 22-04-2016 AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 SMART SM00062 41 267 1.2E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 PANTHER PTHR30085 9 317 8.0E-90 T 22-04-2016 AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 PANTHER PTHR30085:SF5 9 317 8.0E-90 T 22-04-2016 AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 250 1.2E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS01625 19ad3ddd1698e4958d7faad416e21afd 349 Gene3D G3DSA:3.40.190.10 17 168 7.3E-21 T 22-04-2016 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PRINTS PR01607 Apyrase family signature 221 244 2.6E-26 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PRINTS PR01607 Apyrase family signature 247 267 2.6E-26 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PRINTS PR01607 Apyrase family signature 446 465 2.6E-26 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PRINTS PR01607 Apyrase family signature 202 219 2.6E-26 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PRINTS PR01607 Apyrase family signature 373 396 2.6E-26 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 Gene3D G3DSA:3.90.780.10 316 509 3.1E-60 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 SUPERFAMILY SSF55816 316 509 8.24E-57 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 SUPERFAMILY SSF56300 36 310 7.4E-64 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 Pfam PF02872 5'-nucleotidase, C-terminal domain 316 472 2.1E-46 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 Pfam PF00149 Calcineurin-like phosphoesterase 38 239 2.6E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 Gene3D G3DSA:3.60.21.10 31 313 3.0E-67 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PANTHER PTHR11575 37 509 1.1E-142 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK58_RS07525 d444d362047b39ab41eff1951d8e9540 511 PANTHER PTHR11575:SF24 37 509 1.1E-142 T 22-04-2016 AMK58_RS01940 ae0264a8600ffb52eebbb534ce0be249 237 PANTHER PTHR11922 50 219 1.8E-36 T 22-04-2016 AMK58_RS01940 ae0264a8600ffb52eebbb534ce0be249 237 Gene3D G3DSA:3.40.50.880 9 220 7.6E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS01940 ae0264a8600ffb52eebbb534ce0be249 237 Pfam PF07722 Peptidase C26 50 206 8.6E-44 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AMK58_RS01940 ae0264a8600ffb52eebbb534ce0be249 237 PANTHER PTHR11922:SF18 50 219 1.8E-36 T 22-04-2016 AMK58_RS01940 ae0264a8600ffb52eebbb534ce0be249 237 SUPERFAMILY SSF52317 9 225 5.81E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Pfam PF13188 PAS domain 17 60 0.07 T 22-04-2016 IPR000014 PAS domain AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SMART SM00086 206 248 9.2E-4 T 22-04-2016 IPR001610 PAC motif AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Gene3D G3DSA:3.30.450.20 17 123 2.6E-4 T 22-04-2016 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Gene3D G3DSA:3.30.450.20 143 246 9.7E-24 T 22-04-2016 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SUPERFAMILY SSF55785 142 245 2.23E-25 T 22-04-2016 IPR000014 PAS domain AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SUPERFAMILY SSF58104 257 486 6.93E-47 T 22-04-2016 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 4.2E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 349 376 4.2E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 407 4.2E-19 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SMART SM00283 251 491 4.9E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 485 3.4E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 248 8.3E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 PANTHER PTHR24422 125 488 5.1E-77 T 22-04-2016 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Gene3D G3DSA:1.10.287.950 266 482 3.5E-41 T 22-04-2016 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SMART SM00091 12 81 19.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 SMART SM00091 135 201 0.018 T 22-04-2016 IPR000014 PAS domain AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 Pfam PF08447 PAS fold 156 241 4.9E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS13770 bbfaa4bb614cf01211d3294cce7aeb6d 492 PANTHER PTHR24422:SF12 125 488 5.1E-77 T 22-04-2016 AMK58_RS11470 d60dc2baadc1f2a82a0fd8c587db4eb2 79 SUPERFAMILY SSF82657 1 77 1.31E-25 T 22-04-2016 IPR002634 BolA protein AMK58_RS11470 d60dc2baadc1f2a82a0fd8c587db4eb2 79 PIRSF PIRSF003113 1 79 5.6E-20 T 22-04-2016 IPR002634 BolA protein AMK58_RS11470 d60dc2baadc1f2a82a0fd8c587db4eb2 79 PANTHER PTHR12735 1 77 1.2E-14 T 22-04-2016 AMK58_RS11470 d60dc2baadc1f2a82a0fd8c587db4eb2 79 Pfam PF01722 BolA-like protein 27 77 2.5E-15 T 22-04-2016 IPR002634 BolA protein AMK58_RS11470 d60dc2baadc1f2a82a0fd8c587db4eb2 79 Gene3D G3DSA:3.30.300.90 1 77 2.5E-22 T 22-04-2016 IPR002634 BolA protein AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 SUPERFAMILY SSF47384 239 312 3.14E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 SMART SM00387 352 459 2.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 SMART SM00388 255 313 1.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PANTHER PTHR24423:SF533 196 458 4.3E-71 T 22-04-2016 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PANTHER PTHR24423:SF533 60 77 4.3E-71 T 22-04-2016 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 458 8.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 Gene3D G3DSA:3.30.565.10 300 459 3.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PANTHER PTHR24423 196 458 4.3E-71 T 22-04-2016 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 PANTHER PTHR24423 60 77 4.3E-71 T 22-04-2016 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 Gene3D G3DSA:1.10.287.130 245 299 5.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 SUPERFAMILY SSF55874 312 459 6.55E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 SMART SM00304 202 254 4.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 311 2.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01605 ae06fbde9351e3302d527b88176d0077 459 Pfam PF00672 HAMP domain 184 250 3.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 PANTHER PTHR12526 14 367 4.4E-38 T 22-04-2016 AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 Gene3D G3DSA:3.40.50.2000 185 343 4.4E-19 T 22-04-2016 AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 Pfam PF13477 Glycosyl transferase 4-like 4 141 1.1E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 Pfam PF13692 Glycosyl transferases group 1 190 331 6.4E-25 T 22-04-2016 AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 PANTHER PTHR12526:SF374 14 367 4.4E-38 T 22-04-2016 AMK58_RS09235 f136401db6897c74f361bb2741cbb241 381 SUPERFAMILY SSF53756 10 366 4.93E-58 T 22-04-2016 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 189 205 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 SMART SM00937 29 139 8.1E-52 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 PANTHER PTHR11075 1 317 2.6E-152 T 22-04-2016 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 PANTHER PTHR11075:SF6 1 317 2.6E-152 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 309 1.4E-143 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 Pfam PF00472 RF-1 domain 173 282 4.5E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 SUPERFAMILY SSF75620 1 310 1.19E-121 T 22-04-2016 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 Gene3D G3DSA:1.20.58.410 1 59 2.3E-9 T 22-04-2016 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 Pfam PF03462 PCRF domain 1 164 1.5E-51 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK58_RS10710 74abe603a5ac045c5c8d340b37ee6260 319 Gene3D G3DSA:3.30.160.20 172 248 3.7E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Gene3D G3DSA:2.40.50.100 1144 1198 2.2E-10 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376 1164 1250 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376 952 1145 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376 4 933 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376 1291 1367 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1364 10.47 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1351 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 1.5E-88 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 SUPERFAMILY SSF64484 1121 1351 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 SUPERFAMILY SSF64484 15 934 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 SMART SM00663 236 515 4.1E-185 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Gene3D G3DSA:2.40.40.20 350 377 2.4E-37 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Gene3D G3DSA:2.40.40.20 418 490 2.4E-37 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 637 32.478 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 393 6.2E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF00623 RNA polymerase Rpb1, domain 2 394 486 8.0E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 643 1.0E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376:SF32 1164 1250 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376:SF32 952 1145 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376:SF32 4 933 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 PANTHER PTHR19376:SF32 1291 1367 0.0 T 22-04-2016 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1303 3.0E-76 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10440 347f17d37faa75a80615c76292fa2a88 1389 Pfam PF05000 RNA polymerase Rpb1, domain 4 672 752 1.3E-16 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PANTHER PTHR30034 8 82 3.8E-18 T 22-04-2016 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 SUPERFAMILY SSF101801 7 82 3.53E-21 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PANTHER PTHR30034:SF1 8 82 3.8E-18 T 22-04-2016 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 Gene3D G3DSA:2.30.330.10 5 83 1.0E-26 T 22-04-2016 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PRINTS PR00956 Flagellar motor switch protein FliN signature 40 53 2.9E-18 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PRINTS PR00956 Flagellar motor switch protein FliN signature 7 23 2.9E-18 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PRINTS PR00956 Flagellar motor switch protein FliN signature 24 40 2.9E-18 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 PRINTS PR00956 Flagellar motor switch protein FliN signature 53 68 2.9E-18 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 8 77 4.2E-22 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) AMK58_RS06575 3054f341ac73e9f0ba9c63e1af08a60f 85 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 7 79 1.6E-27 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMK58_RS20815 ccb444ca901dd3e16583bb7ba30ca922 113 Gene3D G3DSA:3.10.560.10 24 78 6.0E-9 T 22-04-2016 AMK58_RS20815 ccb444ca901dd3e16583bb7ba30ca922 113 Pfam PF06251 Capsule biosynthesis GfcC 3 107 8.3E-13 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 SUPERFAMILY SSF102645 160 269 1.44E-38 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 1 268 2.9E-88 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 Gene3D G3DSA:3.40.50.1950 1 168 1.8E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 PANTHER PTHR14359:SF20 1 269 4.7E-116 T 22-04-2016 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 SUPERFAMILY SSF52507 1 164 9.42E-55 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 Pfam PF02441 Flavoprotein 1 118 5.1E-31 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 PANTHER PTHR14359 1 269 4.7E-116 T 22-04-2016 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 Gene3D G3DSA:3.40.50.10300 170 269 3.8E-42 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS25930 ea7a211b1610924347855628485c8c4a 270 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 173 269 2.9E-38 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 196 1.0E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 196 3.7E-32 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 SUPERFAMILY SSF56784 10 225 2.13E-55 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 PANTHER PTHR18901 1 217 7.8E-44 T 22-04-2016 AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 189 1.8E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 Gene3D G3DSA:1.10.150.240 29 85 4.9E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK58_RS05870 5a893843b0be2e9152d15adb05c6d001 231 Gene3D G3DSA:3.40.50.1000 86 217 5.4E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Pfam PF00072 Response regulator receiver domain 899 1007 1.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Gene3D G3DSA:3.30.450.20 161 288 6.9E-5 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PANTHER PTHR24423:SF438 479 1014 2.0E-152 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PANTHER PTHR24423:SF438 43 67 2.0E-152 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SUPERFAMILY SSF55785 358 481 2.97E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 859 872 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 818 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 832 7.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Gene3D G3DSA:3.40.50.2300 895 1012 3.7E-34 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PANTHER PTHR24423 479 1014 2.0E-152 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 PANTHER PTHR24423 43 67 2.0E-152 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Gene3D G3DSA:3.30.565.10 688 879 1.8E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SUPERFAMILY SSF55874 703 876 8.77E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Pfam PF08448 PAS fold 510 622 5.7E-11 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SUPERFAMILY SSF47384 636 710 5.69E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SUPERFAMILY SSF55785 479 615 8.72E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SMART SM00387 754 875 1.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 874 7.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Gene3D G3DSA:3.30.450.20 359 481 1.7E-18 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SMART SM00448 897 1006 2.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 Gene3D G3DSA:3.30.450.20 505 635 5.8E-12 T 22-04-2016 AMK58_RS09870 caf5a514ff3a21db0a7c9cbe66f2c75c 1016 SUPERFAMILY SSF52172 895 1011 2.99E-32 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 Pfam PF12697 Alpha/beta hydrolase family 16 245 9.5E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PANTHER PTHR10992 3 252 4.6E-55 T 22-04-2016 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00412 Epoxide hydrolase signature 227 249 2.48E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00412 Epoxide hydrolase signature 39 54 2.48E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00412 Epoxide hydrolase signature 82 95 2.48E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 SUPERFAMILY SSF53474 4 250 6.91E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 3.97E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 3.97E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 196 210 3.97E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 3.97E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11110 974ec21c2cc3a76d2db36852d0d4e758 254 Gene3D G3DSA:3.40.50.1820 4 250 6.8E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 PANTHER PTHR11558 6 285 2.0E-107 T 22-04-2016 AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 286 37.69 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 TIGRFAM TIGR00417 speE: spermidine synthase 8 280 9.2E-97 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 Gene3D G3DSA:3.40.50.150 59 285 6.4E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 Gene3D G3DSA:2.30.140.10 7 58 1.1E-16 T 22-04-2016 AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 SUPERFAMILY SSF53335 7 285 6.95E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00160 29f95c970e06775448b7362f954a8093 286 Pfam PF01564 Spermine/spermidine synthase 8 241 3.7E-70 T 22-04-2016 AMK58_RS13600 2910ce386c9877835110d509268bdd63 457 SUPERFAMILY SSF48452 64 205 2.15E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13600 2910ce386c9877835110d509268bdd63 457 Gene3D G3DSA:1.25.40.10 65 205 6.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.3E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.3E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.3E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.3E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 PANTHER PTHR12220 1 134 5.6E-73 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.5E-58 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.79 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 SUPERFAMILY SSF54686 1 134 1.03E-56 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 Gene3D G3DSA:3.90.1170.10 23 136 4.9E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10370 7f8a967fdd8924179d682b0036f886c8 142 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.0E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 PANTHER PTHR22854:SF2 1 262 6.9E-109 T 22-04-2016 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 PANTHER PTHR22854 1 262 6.9E-109 T 22-04-2016 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 37.608 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 Gene3D G3DSA:3.20.20.70 1 261 1.4E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 1.9E-100 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK58_RS06395 cb3f2123e46ac7cec68c14f94da721b8 262 SUPERFAMILY SSF51366 12 261 5.06E-89 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 PANTHER PTHR30537 1 298 3.0E-77 T 22-04-2016 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 Gene3D G3DSA:3.40.190.10 92 174 3.9E-19 T 22-04-2016 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 SUPERFAMILY SSF46785 4 111 3.64E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 PANTHER PTHR30537:SF26 1 298 3.0E-77 T 22-04-2016 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 Pfam PF03466 LysR substrate binding domain 90 285 1.1E-25 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 Gene3D G3DSA:3.40.190.10 175 253 2.7E-21 T 22-04-2016 AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 Gene3D G3DSA:1.10.10.10 3 83 8.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06345 80a8afa498142c119711bdb123439c3b 306 SUPERFAMILY SSF53850 92 288 1.99E-27 T 22-04-2016 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PANTHER PTHR22912 3 322 6.3E-14 T 22-04-2016 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PANTHER PTHR22912:SF180 3 322 6.3E-14 T 22-04-2016 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 Gene3D G3DSA:3.50.50.60 2 110 9.0E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 Gene3D G3DSA:3.40.50.720 111 164 3.5E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 SUPERFAMILY SSF51905 209 329 3.24E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 SUPERFAMILY SSF51905 2 168 3.24E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 6.0E-7 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 6.0E-7 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 6.0E-7 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 Gene3D G3DSA:3.50.50.60 165 324 3.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.4E-12 T 22-04-2016 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.4E-12 T 22-04-2016 AMK58_RS04645 99940ed72bfa3e73573ea59053fa6114 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 4.4E-12 T 22-04-2016 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 Gene3D G3DSA:1.10.760.10 30 129 1.9E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 41 48 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 119 127 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 102 112 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 69 79 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 83 99 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PRINTS PR00604 Class IA and IB cytochrome C signature 53 68 5.7E-12 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PANTHER PTHR11961:SF6 28 127 1.3E-21 T 22-04-2016 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 Pfam PF00034 Cytochrome c 33 129 5.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 PANTHER PTHR11961 28 127 1.3E-21 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03550 845fdec85332f4fb2c1994ec929e02f3 130 SUPERFAMILY SSF46626 30 129 1.92E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS12315 47636e833617c8f2b8827bff389befc5 259 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 259 47.579 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS12315 47636e833617c8f2b8827bff389befc5 259 Pfam PF02654 Cobalamin-5-phosphate synthase 20 252 7.1E-50 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS12315 47636e833617c8f2b8827bff389befc5 259 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 20 254 1.6E-35 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS12315 47636e833617c8f2b8827bff389befc5 259 PANTHER PTHR34148:SF1 7 257 2.5E-55 T 22-04-2016 AMK58_RS12315 47636e833617c8f2b8827bff389befc5 259 PANTHER PTHR34148 7 257 2.5E-55 T 22-04-2016 AMK58_RS01070 434f67cfa0c972ff9971cf01b1f0b1c4 262 Gene3D G3DSA:3.40.50.720 5 251 1.1E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01070 434f67cfa0c972ff9971cf01b1f0b1c4 262 SUPERFAMILY SSF69572 2 255 1.14E-90 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK58_RS01070 434f67cfa0c972ff9971cf01b1f0b1c4 262 PANTHER PTHR10953:SF153 10 256 5.7E-113 T 22-04-2016 AMK58_RS01070 434f67cfa0c972ff9971cf01b1f0b1c4 262 PANTHER PTHR10953 10 256 5.7E-113 T 22-04-2016 AMK58_RS01070 434f67cfa0c972ff9971cf01b1f0b1c4 262 Pfam PF00899 ThiF family 11 249 1.1E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 Gene3D G3DSA:3.40.50.1980 175 301 1.7E-39 T 22-04-2016 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 Gene3D G3DSA:3.40.50.1980 20 174 1.9E-43 T 22-04-2016 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PANTHER PTHR30477:SF16 3 315 1.0E-112 T 22-04-2016 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 124 143 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 24 45 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 182 199 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 231 248 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 68 87 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00691 Adhesin B signature 49 67 4.8E-21 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 24 42 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 55 68 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 182 203 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 235 253 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 266 285 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PRINTS PR00690 Adhesin family signature 68 85 4.0E-34 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 SUPERFAMILY SSF53807 23 301 4.07E-73 T 22-04-2016 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 PANTHER PTHR30477 3 315 1.0E-112 T 22-04-2016 AMK58_RS01130 57afa35894f40b4b6c917aec1e1241b9 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 299 2.2E-68 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 PANTHER PTHR11835 1 342 1.6E-168 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 PANTHER PTHR11835:SF35 1 342 1.6E-168 T 22-04-2016 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 338 2.2E-121 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 Gene3D G3DSA:3.40.718.10 2 342 1.8E-108 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 224 243 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 SUPERFAMILY SSF53659 1 342 3.46E-102 T 22-04-2016 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 SMART SM01329 1 338 2.8E-160 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 337 3.3E-135 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK58_RS27395 eacab98e4ec13602ecc111b994ff42a6 342 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 342 44.032 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 Gene3D G3DSA:1.10.3810.10 137 350 1.6E-4 T 22-04-2016 AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 SUPERFAMILY SSF53955 137 354 2.17E-7 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 SUPERFAMILY SSF56601 718 993 7.66E-26 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 Pfam PF00912 Transglycosylase 130 333 9.9E-25 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 Gene3D G3DSA:3.40.710.10 551 628 3.2E-13 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 Gene3D G3DSA:3.40.710.10 793 988 3.6E-24 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11355 6db6fb39bc3cbc17cb41034e434e7688 1008 Gene3D G3DSA:3.40.710.10 383 504 3.2E-13 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 PANTHER PTHR24198 635 811 3.4E-44 T 22-04-2016 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 Gene3D G3DSA:3.40.50.300 27 80 5.8E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 SMART SM00248 659 688 0.2 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 SMART SM00248 692 721 0.024 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 SMART SM00248 758 787 6.5E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 SMART SM00248 725 754 1.1E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 Gene3D G3DSA:1.25.40.10 525 587 0.001 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 Gene3D G3DSA:1.25.40.20 638 813 3.6E-48 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 Pfam PF12796 Ankyrin repeats (3 copies) 716 786 6.5E-13 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS10580 09e74ef42b1a35c32e499868560d3626 814 SUPERFAMILY SSF48403 637 813 4.5E-43 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS07885 027cc011c172b8d0485b754d6bce6fe6 376 Pfam PF04230 Polysaccharide pyruvyl transferase 14 297 3.1E-39 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase AMK58_RS07885 027cc011c172b8d0485b754d6bce6fe6 376 PANTHER PTHR36836:SF1 1 372 1.9E-81 T 22-04-2016 AMK58_RS07885 027cc011c172b8d0485b754d6bce6fe6 376 PANTHER PTHR36836 1 372 1.9E-81 T 22-04-2016 AMK58_RS01340 44e8e03479f099edf45efe709e871d95 194 Gene3D G3DSA:3.40.1280.10 8 141 4.2E-24 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS01340 44e8e03479f099edf45efe709e871d95 194 SUPERFAMILY SSF75217 6 145 5.62E-28 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS01340 44e8e03479f099edf45efe709e871d95 194 PANTHER PTHR12029 9 139 4.1E-18 T 22-04-2016 AMK58_RS01340 44e8e03479f099edf45efe709e871d95 194 Pfam PF00588 SpoU rRNA Methylase family 6 139 6.3E-21 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.7E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.7E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.7E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.7E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 Gene3D G3DSA:3.40.50.150 108 289 2.7E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 PANTHER PTHR10108 115 286 2.1E-29 T 22-04-2016 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 Pfam PF08241 Methyltransferase domain 153 249 5.7E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 Gene3D G3DSA:1.10.10.10 2 74 2.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 Pfam PF01022 Bacterial regulatory protein, arsR family 15 58 3.5E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 SUPERFAMILY SSF53335 114 297 1.45E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 SMART SM00418 6 88 6.7E-19 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS08815 52abbc49155a24ce649e80022e21fd30 327 SUPERFAMILY SSF46785 1 107 1.55E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00210 43b370642aa510d081a84aa50a1938f6 410 SUPERFAMILY SSF53756 9 361 1.45E-15 T 22-04-2016 AMK58_RS00210 43b370642aa510d081a84aa50a1938f6 410 Gene3D G3DSA:3.40.50.2000 193 361 5.4E-17 T 22-04-2016 AMK58_RS00210 43b370642aa510d081a84aa50a1938f6 410 PANTHER PTHR21015:SF23 9 409 1.1E-55 T 22-04-2016 IPR016683 Glycosyl transferase, family 28, RedA, predicted AMK58_RS00210 43b370642aa510d081a84aa50a1938f6 410 PANTHER PTHR21015 9 409 1.1E-55 T 22-04-2016 AMK58_RS16775 49fb6869ae3c23465396cb9cdc8d108d 198 Gene3D G3DSA:3.20.20.450 96 197 6.2E-17 T 22-04-2016 IPR001633 EAL domain AMK58_RS16775 49fb6869ae3c23465396cb9cdc8d108d 198 Pfam PF00563 EAL domain 96 197 1.9E-21 T 22-04-2016 IPR001633 EAL domain AMK58_RS16775 49fb6869ae3c23465396cb9cdc8d108d 198 SUPERFAMILY SSF141868 96 197 6.54E-17 T 22-04-2016 IPR001633 EAL domain AMK58_RS10030 59d049968b5cb471970a4e6a7403e82f 108 PANTHER PTHR34205 12 108 5.3E-33 T 22-04-2016 AMK58_RS10030 59d049968b5cb471970a4e6a7403e82f 108 Pfam PF06127 Protein of unknown function (DUF962) 11 99 6.2E-26 T 22-04-2016 IPR009305 Protein of unknown function DUF962 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PRINTS PR00340 P-II protein signature 52 75 2.2E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PRINTS PR00340 P-II protein signature 2 17 2.2E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PRINTS PR00340 P-II protein signature 23 41 2.2E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PRINTS PR00340 P-II protein signature 83 103 2.2E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PIRSF PIRSF039144 1 112 4.4E-54 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PANTHER PTHR30115 1 112 1.9E-69 T 22-04-2016 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 PANTHER PTHR30115:SF15 1 112 1.9E-69 T 22-04-2016 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 SMART SM00938 4 105 8.8E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 SUPERFAMILY SSF54913 1 112 6.99E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK58_RS13700 70877576a14879c65d1542901c5f8150 112 Gene3D G3DSA:3.30.70.120 1 112 2.1E-50 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 PANTHER PTHR14136:SF0 14 231 1.1E-44 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 PANTHER PTHR14136:SF0 276 358 1.1E-44 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 SUPERFAMILY SSF141571 125 244 1.96E-32 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 SUPERFAMILY SSF141571 267 428 1.08E-36 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 274 309 2.2E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 191 230 1.8E-14 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 391 428 1.9E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 127 160 3.9E-7 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 315 350 3.5E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 Pfam PF00805 Pentapeptide repeats (8 copies) 48 83 4.9E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 SUPERFAMILY SSF141571 25 112 7.06E-23 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 PANTHER PTHR14136 14 231 1.1E-44 T 22-04-2016 AMK58_RS07195 db33c1b409c46c197ec57e1da542cb55 436 PANTHER PTHR14136 276 358 1.1E-44 T 22-04-2016 AMK58_RS06025 a95db25cfa38458f3ef9ba1aa300116e 82 Pfam PF06568 Domain of unknown function (DUF1127) 44 71 2.8E-12 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 Pfam PF00675 Insulinase (Peptidase family M16) 60 205 3.0E-28 T 22-04-2016 IPR011765 Peptidase M16, N-terminal AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 SUPERFAMILY SSF63411 277 462 1.83E-30 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 80 103 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 PANTHER PTHR11851 50 457 8.2E-95 T 22-04-2016 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 SUPERFAMILY SSF63411 50 253 2.89E-59 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 Pfam PF05193 Peptidase M16 inactive domain 214 395 5.8E-32 T 22-04-2016 IPR007863 Peptidase M16, C-terminal AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 Gene3D G3DSA:3.30.830.10 277 455 1.5E-22 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 Gene3D G3DSA:3.30.830.10 50 271 2.3E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS10990 65b80dcfee03711862953021fe1b95f7 468 PANTHER PTHR11851:SF136 50 457 8.2E-95 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.50.50.60 108 122 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.50.50.60 190 269 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.50.50.60 1 55 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.50.50.60 360 422 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 PANTHER PTHR13847:SF148 1 63 4.7E-206 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 PANTHER PTHR13847:SF148 107 416 4.7E-206 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.59 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 SUPERFAMILY SSF54373 270 360 5.1E-17 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.30.9.10 270 357 1.9E-15 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Gene3D G3DSA:3.30.9.10 135 189 1.9E-15 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 SUPERFAMILY SSF51905 1 54 2.98E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 SUPERFAMILY SSF51905 360 419 2.98E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 SUPERFAMILY SSF51905 107 270 2.98E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 PANTHER PTHR13847 1 63 4.7E-206 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 PANTHER PTHR13847 107 416 4.7E-206 T 22-04-2016 AMK58_RS07035 d0040d251f1dab474135041fb7fd7142 437 Pfam PF01266 FAD dependent oxidoreductase 3 397 8.3E-71 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 SUPERFAMILY SSF46911 17 90 8.24E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 PRINTS PR00974 Ribosomal protein S18 family signature 45 55 6.68414E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 PRINTS PR00974 Ribosomal protein S18 family signature 55 62 6.68414E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 PRINTS PR00974 Ribosomal protein S18 family signature 77 87 6.68414E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 PRINTS PR00974 Ribosomal protein S18 family signature 63 77 6.68414E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 21 89 4.7E-31 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 19 90 22.336 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 PANTHER PTHR13479 17 90 3.0E-29 T 22-04-2016 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 Gene3D G3DSA:4.10.640.10 25 90 4.2E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 Pfam PF01084 Ribosomal protein S18 37 85 3.8E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 ProSitePatterns PS00057 Ribosomal protein S18 signature. 38 61 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07390 3fc116a2c7b7c4a627cc13ad297c7e1b 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 38 90 7.0E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 58 194 2.8E-56 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 Gene3D G3DSA:3.40.50.261 40 192 3.9E-32 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 PANTHER PTHR11117 1 387 8.8E-157 T 22-04-2016 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 PANTHER PTHR11117:SF8 1 387 8.8E-157 T 22-04-2016 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 SUPERFAMILY SSF52210 203 360 1.7E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 SUPERFAMILY SSF52210 38 195 3.53E-46 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 Gene3D G3DSA:3.40.50.261 198 352 8.7E-22 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS14540 ec0fed5d9847f5b2a0397e2770157957 387 Gene3D G3DSA:3.40.50.720 2 39 1.8E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Gene3D G3DSA:3.40.50.980 13 182 1.8E-32 T 22-04-2016 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 510 2.4E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 PANTHER PTHR24096 13 521 1.8E-126 T 22-04-2016 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Pfam PF00501 AMP-binding enzyme 18 424 2.4E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Gene3D G3DSA:3.40.50.980 183 329 3.2E-29 T 22-04-2016 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Gene3D G3DSA:2.30.38.10 347 418 5.6E-17 T 22-04-2016 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 SUPERFAMILY SSF56801 9 520 5.36E-122 T 22-04-2016 AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS09460 342b3bd9cd80da32f04a8361a8c8cbb6 532 Gene3D G3DSA:3.30.300.30 419 519 6.2E-22 T 22-04-2016 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 PANTHER PTHR13847:SF196 41 468 2.1E-73 T 22-04-2016 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 PANTHER PTHR13847 41 468 2.1E-73 T 22-04-2016 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Gene3D G3DSA:2.102.10.10 389 516 2.3E-27 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Pfam PF01266 FAD dependent oxidoreductase 41 389 3.7E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 SUPERFAMILY SSF50022 437 515 5.89E-22 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Pfam PF00355 Rieske [2Fe-2S] domain 440 513 4.3E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 SUPERFAMILY SSF51905 40 262 8.29E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 SUPERFAMILY SSF51905 349 398 8.29E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 PRINTS PR00162 Rieske 2Fe-2S subunit signature 488 500 9.0E-6 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 PRINTS PR00162 Rieske 2Fe-2S subunit signature 500 512 9.0E-6 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 PRINTS PR00162 Rieske 2Fe-2S subunit signature 467 478 9.0E-6 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Gene3D G3DSA:3.50.50.60 349 388 1.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Gene3D G3DSA:3.50.50.60 39 130 1.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11575 9a0d3b8e75c15834eae3d82c8e9fed33 522 Gene3D G3DSA:3.50.50.60 178 260 1.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 31 553 5.9E-244 T 22-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 Gene3D G3DSA:2.140.10.10 8 582 1.3E-158 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 Pfam PF13360 PQQ-like domain 74 309 4.5E-20 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 Pfam PF01011 PQQ enzyme repeat 499 535 2.7E-10 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 442 484 0.036 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 284 311 23.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 91 122 8.1E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 493 525 2.0E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 140 171 7.8E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SMART SM00564 185 222 0.11 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 PANTHER PTHR32303 398 582 1.9E-123 T 22-04-2016 AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 PANTHER PTHR32303 44 360 1.9E-123 T 22-04-2016 AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 SUPERFAMILY SSF50998 35 576 1.31E-168 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 PANTHER PTHR32303:SF2 398 582 1.9E-123 T 22-04-2016 AMK58_RS03515 6ff6c866d65f79ba9de31990607b0c25 583 PANTHER PTHR32303:SF2 44 360 1.9E-123 T 22-04-2016 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Gene3D G3DSA:3.40.50.300 20 157 5.1E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 59 167 2.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Gene3D G3DSA:1.20.272.10 248 346 4.4E-45 T 22-04-2016 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 SMART SM00382 55 171 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 SUPERFAMILY SSF52540 19 224 6.69E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Gene3D G3DSA:1.10.8.60 158 222 1.2E-6 T 22-04-2016 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 267 432 2.4E-70 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 SUPERFAMILY SSF48019 252 436 6.23E-75 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 PANTHER PTHR13779:SF7 20 439 2.2E-185 T 22-04-2016 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 PANTHER PTHR13779 20 439 2.2E-185 T 22-04-2016 AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Pfam PF16193 AAA C-terminal domain 190 266 1.0E-18 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain AMK58_RS05840 7e3d00ac6708c196600619954cc8c1e5 445 Gene3D G3DSA:1.10.3710.10 348 440 3.1E-32 T 22-04-2016 AMK58_RS06485 3b1c98d48d67b1e336a2133c2c0b2842 309 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 4 309 1.3E-117 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 AMK58_RS06485 3b1c98d48d67b1e336a2133c2c0b2842 309 Pfam PF12706 Beta-lactamase superfamily domain 51 276 1.7E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06485 3b1c98d48d67b1e336a2133c2c0b2842 309 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 309 149.813 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 AMK58_RS06485 3b1c98d48d67b1e336a2133c2c0b2842 309 SUPERFAMILY SSF56281 3 309 2.66E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06485 3b1c98d48d67b1e336a2133c2c0b2842 309 Gene3D G3DSA:3.60.15.10 2 309 8.3E-103 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SUPERFAMILY SSF55785 283 412 2.42E-28 T 22-04-2016 IPR000014 PAS domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SMART SM00086 372 414 8.2E-7 T 22-04-2016 IPR001610 PAC motif AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PANTHER PTHR24423 17 37 1.2E-87 T 22-04-2016 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PANTHER PTHR24423 282 662 1.2E-87 T 22-04-2016 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Pfam PF00512 His Kinase A (phospho-acceptor) domain 437 503 5.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 419 6.4E-27 T 22-04-2016 IPR000014 PAS domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SMART SM00387 548 658 1.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SMART SM00091 298 365 2.2E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PANTHER PTHR24423:SF505 17 37 1.2E-87 T 22-04-2016 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 PANTHER PTHR24423:SF505 282 662 1.2E-87 T 22-04-2016 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Gene3D G3DSA:1.10.287.130 436 502 3.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 549 656 5.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Gene3D G3DSA:3.30.565.10 507 656 7.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SMART SM00388 436 506 4.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Gene3D G3DSA:3.30.450.20 285 412 6.7E-26 T 22-04-2016 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SUPERFAMILY SSF55874 497 658 6.55E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 SUPERFAMILY SSF47384 424 504 5.49E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08740 67f08c1fbd4f1c95307679b2f024711a 676 Pfam PF00989 PAS fold 299 411 8.8E-18 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 PANTHER PTHR30231 504 720 1.2E-56 T 22-04-2016 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 SUPERFAMILY SSF53098 535 710 1.01E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 SMART SM00091 155 221 0.0011 T 22-04-2016 IPR000014 PAS domain AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 541 705 1.3E-34 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 Pfam PF00929 Exonuclease 543 700 2.7E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 SMART SM00479 541 709 1.4E-53 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 Gene3D G3DSA:3.30.420.10 535 715 2.9E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 Gene3D G3DSA:3.30.450.20 148 279 3.6E-7 T 22-04-2016 AMK58_RS02430 b84b9dd035d0f77c6e124dda16f39c06 735 SUPERFAMILY SSF55785 148 251 6.66E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PANTHER PTHR19139 2 231 6.8E-79 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 Pfam PF00230 Major intrinsic protein 3 225 2.9E-54 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 SUPERFAMILY SSF81338 4 228 1.7E-70 T 22-04-2016 IPR023271 Aquaporin-like AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PANTHER PTHR19139:SF103 2 231 6.8E-79 T 22-04-2016 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 TIGRFAM TIGR00861 MIP: MIP family channel proteins 9 225 4.6E-64 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 Gene3D G3DSA:1.20.1080.10 2 230 3.6E-71 T 22-04-2016 IPR023271 Aquaporin-like AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 ProSitePatterns PS00221 MIP family signature. 63 71 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 45 69 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 139 157 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 5 24 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 208 228 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 82 101 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 PRINTS PR00783 Major intrinsic protein family signature 169 191 1.1E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK58_RS11935 5d86f4eb6cc0fa35328925d41fa9c952 246 Hamap MF_01146 Aquaporin Z [aqpZ]. 4 232 35.464 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 Gene3D G3DSA:3.40.1180.10 9 241 2.8E-100 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 5.2E-82 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 PANTHER PTHR10291 13 239 2.1E-121 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 239 3.3E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 41.486 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS06285 1f679667cc18e5fcbbd6c67b8d0a0730 245 SUPERFAMILY SSF64005 12 234 4.58E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 SUPERFAMILY SSF111369 257 326 2.48E-5 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 Pfam PF13437 HlyD family secretion protein 297 394 7.7E-13 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PANTHER PTHR30386 28 121 4.4E-96 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PANTHER PTHR30386 156 445 4.4E-96 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 Pfam PF13533 Biotin-lipoyl like 76 109 6.9E-6 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 444 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 36 59 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 330 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 366 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 409 424 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 389 1.6E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PANTHER PTHR30386:SF3 28 121 4.4E-96 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 PANTHER PTHR30386:SF3 156 445 4.4E-96 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 Gene3D G3DSA:2.40.50.100 294 329 3.6E-15 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 Gene3D G3DSA:2.40.50.100 69 100 3.6E-15 T 22-04-2016 AMK58_RS04945 b6ab85b806d791a840e3be5f278a6499 445 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 444 3.1E-112 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 PANTHER PTHR30460:SF0 371 777 2.1E-111 T 22-04-2016 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 SUPERFAMILY SSF82689 658 761 1.22E-13 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 Pfam PF00924 Mechanosensitive ion channel 550 751 6.9E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 SUPERFAMILY SSF50182 593 656 1.41E-10 T 22-04-2016 IPR010920 LSM domain AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 SUPERFAMILY SSF82861 512 591 7.45E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 PANTHER PTHR30460 371 777 2.1E-111 T 22-04-2016 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 Gene3D G3DSA:2.30.30.60 609 655 1.4E-9 T 22-04-2016 AMK58_RS13245 dbf483835e2c5194475ce5d8e1565dba 778 Gene3D G3DSA:3.30.70.100 665 749 1.8E-7 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PANTHER PTHR22617:SF20 169 731 1.7E-215 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SUPERFAMILY SSF50341 582 715 1.44E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:3.30.565.10 401 582 3.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PANTHER PTHR22617 3 151 1.7E-215 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SUPERFAMILY SSF47384 335 398 1.02E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 582 4.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PANTHER PTHR22617:SF20 3 151 1.7E-215 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SUPERFAMILY SSF47226 4 128 9.55E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SMART SM01231 334 397 1.4E-21 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SMART SM00073 3 101 2.2E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:1.20.120.160 3 143 5.4E-36 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:1.10.287.560 335 398 1.6E-20 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:2.30.30.40 672 715 9.8E-24 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:2.30.30.40 583 604 9.8E-24 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SUPERFAMILY SSF55874 395 585 2.75E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SMART SM00387 442 583 5.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Pfam PF01584 CheW-like domain 588 715 3.1E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 537 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 501 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Pfam PF01627 Hpt domain 8 100 1.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 PANTHER PTHR22617 169 731 1.7E-215 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Gene3D G3DSA:2.40.50.180 606 671 3.7E-8 T 22-04-2016 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 335 397 1.4E-16 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK58_RS02405 10cdbb71f9d4bde5ab372b3d03bd21f9 745 SMART SM00260 575 716 1.1E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 165 1.0E-24 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 PANTHER PTHR13696:SF54 3 213 8.6E-36 T 22-04-2016 AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 SUPERFAMILY SSF52540 4 213 2.34E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 PIRSF PIRSF009320 3 215 1.1E-47 T 22-04-2016 AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 PANTHER PTHR13696 3 213 8.6E-36 T 22-04-2016 AMK58_RS04865 3f974a1afe28dc7615aef0bc30bf2cb1 215 Gene3D G3DSA:3.40.50.300 4 213 2.9E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 SUPERFAMILY SSF53686 6 327 4.06E-96 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 PANTHER PTHR10314 1 331 2.1E-151 T 22-04-2016 AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 Gene3D G3DSA:3.40.50.1100 3 42 2.3E-66 T 22-04-2016 AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 Gene3D G3DSA:3.40.50.1100 157 324 2.3E-66 T 22-04-2016 AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 Gene3D G3DSA:3.40.50.1100 43 151 1.8E-37 T 22-04-2016 AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 306 1.2E-71 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS07710 da712d7fe93f59e9fe419c22750a06fa 334 PANTHER PTHR10314:SF83 1 331 2.1E-151 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089:SF56 276 555 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089:SF56 135 159 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089:SF56 185 243 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SUPERFAMILY SSF58104 304 546 4.71E-57 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SUPERFAMILY SSF58104 236 263 4.71E-57 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 Pfam PF07238 PilZ domain 560 642 2.5E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 Pfam PF00672 HAMP domain 189 252 1.0E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 5.7E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 502 5.7E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 326 355 5.7E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 Gene3D G3DSA:1.10.287.950 313 521 1.8E-42 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SMART SM00283 298 545 3.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SUPERFAMILY SSF141371 556 635 1.06E-5 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089 276 555 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089 135 159 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 PANTHER PTHR32089 185 243 2.8E-109 T 22-04-2016 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 Pfam PF02203 Tar ligand binding domain homologue 2 168 4.3E-13 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SMART SM00304 507 563 91.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 SMART SM00304 208 261 3.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04540 7a3c1638a4ea09cc73f06104264a5c0f 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 544 1.0E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05060 f5c6a0c22895cbf31f66bf5b4e9fac05 255 SUPERFAMILY SSF88874 28 168 3.01E-26 T 22-04-2016 AMK58_RS05060 f5c6a0c22895cbf31f66bf5b4e9fac05 255 Pfam PF07484 Phage Tail Collar Domain 33 88 5.7E-19 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS05060 f5c6a0c22895cbf31f66bf5b4e9fac05 255 PANTHER PTHR34720 29 129 3.1E-18 T 22-04-2016 AMK58_RS05060 f5c6a0c22895cbf31f66bf5b4e9fac05 255 Gene3D G3DSA:3.90.1340.10 27 94 7.0E-23 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 SUPERFAMILY SSF53649 60 484 6.67E-118 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 PANTHER PTHR10342 29 530 2.5E-150 T 22-04-2016 AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 Pfam PF00884 Sulfatase 63 389 1.3E-59 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 Gene3D G3DSA:3.30.1120.10 418 466 9.2E-7 T 22-04-2016 AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 Gene3D G3DSA:3.40.720.10 61 417 1.0E-96 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK58_RS03100 cd79e01ab5bba8bc9db0b92ed0a76a34 557 PANTHER PTHR10342:SF241 29 530 2.5E-150 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 1.94E-8 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.94E-8 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.4E-13 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.4E-13 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 1.4E-13 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 100 108 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 75 86 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 165 178 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 120 132 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.85E-34 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 Pfam PF00117 Glutamine amidotransferase class-I 3 186 1.5E-55 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 Gene3D G3DSA:3.40.50.880 2 189 1.2E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 SUPERFAMILY SSF52317 1 190 3.91E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 3.5E-69 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PANTHER PTHR11922 1 189 1.6E-80 T 22-04-2016 AMK58_RS06405 58b78e6d0aaada09cef3bddbc1ff4a76 196 PANTHER PTHR11922:SF7 1 189 1.6E-80 T 22-04-2016 AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 149 383 1.9E-71 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 SMART SM01002 154 321 9.8E-87 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 SUPERFAMILY SSF51735 145 327 9.67E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 Gene3D G3DSA:3.40.50.1770 196 382 1.8E-35 T 22-04-2016 AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 PANTHER PTHR10160 1 390 3.0E-173 T 22-04-2016 AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 SMART SM01003 4 145 4.2E-66 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 145 2.0E-42 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 SUPERFAMILY SSF52283 1 176 2.64E-51 T 22-04-2016 AMK58_RS06895 552a3f8c4bea426dba70db7c28e5e420 396 Gene3D G3DSA:3.40.50.1770 2 195 2.9E-62 T 22-04-2016 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PANTHER PTHR11390 517 598 1.1E-112 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PANTHER PTHR11390 1 499 1.1E-112 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 SUPERFAMILY SSF56712 3 603 7.32E-136 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Gene3D G3DSA:3.40.50.140 3 140 4.0E-28 T 22-04-2016 IPR006171 Toprim domain AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Pfam PF01131 DNA topoisomerase 143 592 7.8E-93 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 88 101 3.2E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 301 310 3.2E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 3.2E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 179 197 3.2E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 3.2E-22 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 SMART SM00493 2 114 1.8E-15 T 22-04-2016 IPR006171 Toprim domain AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 SMART SM00437 256 554 9.5E-54 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Gene3D G3DSA:1.10.460.10 144 203 1.5E-40 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Gene3D G3DSA:1.10.460.10 478 600 1.5E-40 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 SMART SM00436 114 209 1.9E-16 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Pfam PF01751 Toprim domain 3 120 7.2E-17 T 22-04-2016 IPR006171 Toprim domain AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Gene3D G3DSA:2.70.20.10 349 477 6.6E-25 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK58_RS09780 b43e019ab00bf2c84393692fbc1a6689 743 Gene3D G3DSA:2.70.20.10 204 237 6.6E-25 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 PANTHER PTHR26402 2 212 1.0E-69 T 22-04-2016 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 SMART SM00448 2 120 3.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 SMART SM00421 152 209 3.7E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 Gene3D G3DSA:3.40.50.2300 2 131 1.0E-28 T 22-04-2016 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 SUPERFAMILY SSF52172 1 133 1.31E-26 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 SUPERFAMILY SSF46894 143 214 3.74E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 PANTHER PTHR26402:SF474 2 212 1.0E-69 T 22-04-2016 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 Gene3D G3DSA:1.10.10.10 142 214 2.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 Pfam PF00072 Response regulator receiver domain 4 119 5.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03520 f88df774c89e974c1b5efbeaf91272d5 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.6E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PANTHER PTHR22912 11 335 5.4E-163 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 26 322 1.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 Gene3D G3DSA:3.50.50.60 256 328 1.0E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PANTHER PTHR22912:SF48 11 335 5.4E-163 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 6.8E-41 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 125 143 6.8E-41 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 6.8E-41 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 27 46 6.8E-41 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 6.8E-41 T 22-04-2016 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 Gene3D G3DSA:3.50.50.60 22 138 3.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 Gene3D G3DSA:3.50.50.60 139 255 2.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 155 175 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 231 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 26 48 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 282 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 163 187 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 134 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 74 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 80 90 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 296 314 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 160 4.0E-80 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 26 333 1.5E-126 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AMK58_RS03335 d0eeb47b06218165f44e67dfa1cbab56 346 SUPERFAMILY SSF51905 19 333 8.64E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:3.30.450.20 79 200 3.7E-9 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:3.30.450.20 202 325 6.7E-12 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF55874 521 698 8.91E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:1.10.287.130 459 528 5.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:3.30.565.10 533 699 3.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF01627 Hpt domain 1023 1107 1.7E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF47384 453 533 3.73E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF55785 325 445 1.61E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00387 579 700 3.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF52172 861 986 1.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 336 454 6.0E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:1.20.120.160 997 1112 2.2E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF55785 73 199 9.16E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF55785 198 326 5.93E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF12860 PAS fold 220 332 2.5E-29 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF12860 PAS fold 92 206 5.0E-18 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF00512 His Kinase A (phospho-acceptor) domain 467 532 5.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 579 698 4.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SUPERFAMILY SSF47226 1000 1112 4.71E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 5.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00448 862 981 6.7E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00091 340 405 6.4E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00091 85 151 92.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00091 213 281 16.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 PANTHER PTHR24423 189 703 2.4E-183 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 PANTHER PTHR24423 839 1027 2.4E-183 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:3.40.50.2300 861 986 6.7E-39 T 22-04-2016 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF13426 PAS domain 351 446 5.2E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 SMART SM00388 467 532 5.3E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Pfam PF00072 Response regulator receiver domain 864 981 5.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01110 31f4e8295b631c119b16837a03d31c6a 1120 Gene3D G3DSA:3.30.450.20 326 445 9.6E-24 T 22-04-2016 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 Gene3D G3DSA:3.40.50.300 200 501 6.0E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 PANTHER PTHR30153 461 509 1.4E-173 T 22-04-2016 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 PANTHER PTHR30153 17 436 1.4E-173 T 22-04-2016 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 501 1.1E-157 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 SUPERFAMILY SSF52540 209 432 7.54E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 SUPERFAMILY SSF52540 466 492 7.54E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 7.6E-29 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 SUPERFAMILY SSF48024 31 143 1.96E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 Gene3D G3DSA:1.10.860.10 33 134 7.1E-30 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMK58_RS07370 b8f6c5b491f03fdb03c4f7e1b51508f2 510 Pfam PF03796 DnaB-like helicase C terminal domain 211 498 1.2E-104 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 AMK58_RS11495 21ab0cece84347ffb53971e46519a8c5 367 PANTHER PTHR22893:SF14 1 366 6.9E-180 T 22-04-2016 AMK58_RS11495 21ab0cece84347ffb53971e46519a8c5 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 3.3E-89 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMK58_RS11495 21ab0cece84347ffb53971e46519a8c5 367 SUPERFAMILY SSF51395 2 363 2.04E-127 T 22-04-2016 AMK58_RS11495 21ab0cece84347ffb53971e46519a8c5 367 PANTHER PTHR22893 1 366 6.9E-180 T 22-04-2016 AMK58_RS11495 21ab0cece84347ffb53971e46519a8c5 367 Gene3D G3DSA:3.20.20.70 1 364 2.5E-138 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 PANTHER PTHR22931:SF9 31 578 5.3E-214 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 SUPERFAMILY SSF56059 46 422 1.06E-122 T 22-04-2016 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 PANTHER PTHR22931 31 578 5.3E-214 T 22-04-2016 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:1.20.80.30 159 245 9.4E-29 T 22-04-2016 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:3.50.30.10 451 555 4.4E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 350 406 2.6E-10 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 66 97 1.2E-6 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 109 335 7.9E-30 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 SUPERFAMILY SSF52009 437 561 2.49E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:1.10.189.10 393 450 7.2E-16 T 22-04-2016 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:3.30.470.20 291 392 1.9E-30 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:3.30.1490.20 47 158 7.1E-48 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Gene3D G3DSA:3.30.1490.20 247 290 7.1E-48 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS07005 6a2d1dc41ffe46542df20b7fdb992769 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 473 552 9.7E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 2.0E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 2.0E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 2.0E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PANTHER PTHR30295:SF6 1 155 5.8E-68 T 22-04-2016 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 Gene3D G3DSA:1.20.1260.10 1 155 2.9E-68 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 SUPERFAMILY SSF47240 5 155 7.88E-51 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 Pfam PF00210 Ferritin-like domain 17 155 1.1E-31 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PANTHER PTHR30295 1 155 5.8E-68 T 22-04-2016 AMK58_RS03325 d558ab8b23a7a1e4c1b3ed767f034d5c 155 PIRSF PIRSF005900 1 155 2.8E-48 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK58_RS06290 b66f91b3c4a164cc63b359ab34050a47 260 PANTHER PTHR13773:SF0 1 249 1.0E-53 T 22-04-2016 AMK58_RS06290 b66f91b3c4a164cc63b359ab34050a47 260 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 211 237 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 AMK58_RS06290 b66f91b3c4a164cc63b359ab34050a47 260 PANTHER PTHR13773 1 249 1.0E-53 T 22-04-2016 AMK58_RS06290 b66f91b3c4a164cc63b359ab34050a47 260 Pfam PF01148 Cytidylyltransferase family 2 251 2.5E-58 T 22-04-2016 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 PANTHER PTHR10277:SF28 17 566 1.1E-273 T 22-04-2016 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 251 264 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 17 566 4.2E-240 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 SUPERFAMILY SSF51569 30 338 2.56E-98 T 22-04-2016 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 Pfam PF00682 HMGL-like 42 319 1.5E-75 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 13 566 53.863 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 PANTHER PTHR10277 17 566 1.1E-273 T 22-04-2016 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 48 64 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 SUPERFAMILY SSF110921 457 564 3.66E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 Pfam PF08502 LeuA allosteric (dimerisation) domain 432 564 3.1E-30 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 SUPERFAMILY SSF89000 398 448 1.06E-15 T 22-04-2016 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 Gene3D G3DSA:3.20.20.70 19 404 1.1E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS04095 93b5387bb0b7d80d2cb6ad4a2501fda5 566 SMART SM00917 432 565 1.8E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS11230 7d66a8df297e021acad0bf2e45870a53 137 Gene3D G3DSA:3.30.110.70 70 133 2.2E-5 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 Pfam PF13426 PAS domain 376 473 2.6E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 SUPERFAMILY SSF55874 588 751 1.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PANTHER PTHR24423 507 539 4.7E-63 T 22-04-2016 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PANTHER PTHR24423 560 760 4.7E-63 T 22-04-2016 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PANTHER PTHR24423 362 490 4.7E-63 T 22-04-2016 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 Gene3D G3DSA:3.30.450.20 355 473 2.7E-14 T 22-04-2016 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 SUPERFAMILY SSF55785 352 473 1.48E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 SMART SM00387 637 750 3.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 640 749 8.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 Gene3D G3DSA:3.30.565.10 598 747 9.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 481 8.1E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 747 6.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 6.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 692 6.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01945 5f2292e77902258e3a50982c4c29943b 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 706 6.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10455 28b24231602264f4e72ad2fad2c51072 172 SUPERFAMILY SSF160369 3 168 2.09E-56 T 22-04-2016 AMK58_RS10455 28b24231602264f4e72ad2fad2c51072 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.792 T 22-04-2016 IPR022973 Ribosomal protein L10 AMK58_RS10455 28b24231602264f4e72ad2fad2c51072 172 Pfam PF00466 Ribosomal protein L10 3 98 1.4E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMK58_RS10455 28b24231602264f4e72ad2fad2c51072 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10455 28b24231602264f4e72ad2fad2c51072 172 PANTHER PTHR11560 3 170 3.3E-59 T 22-04-2016 AMK58_RS11390 16816dafff24d57e74ed024f3ff4b925 242 PANTHER PTHR30545:SF2 1 239 2.3E-75 T 22-04-2016 AMK58_RS11390 16816dafff24d57e74ed024f3ff4b925 242 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 228 5.7E-61 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK58_RS11390 16816dafff24d57e74ed024f3ff4b925 242 Pfam PF03749 Sugar fermentation stimulation protein 13 232 1.1E-73 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK58_RS11390 16816dafff24d57e74ed024f3ff4b925 242 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 241 55.51 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK58_RS11390 16816dafff24d57e74ed024f3ff4b925 242 PANTHER PTHR30545 1 239 2.3E-75 T 22-04-2016 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 Gene3D G3DSA:1.10.10.10 18 88 1.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 SMART SM00895 110 234 8.1E-21 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 Gene3D G3DSA:1.20.120.530 98 244 6.8E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 PANTHER PTHR11751 27 126 1.4E-27 T 22-04-2016 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 SMART SM00345 27 86 6.9E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 3.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 Pfam PF07729 FCD domain 110 232 6.4E-24 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 SUPERFAMILY SSF46785 19 90 1.43E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10295 e6be7aacb071ba4e1241add5a1de4e18 258 SUPERFAMILY SSF48008 107 240 4.97E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SMART SM00382 346 526 9.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SUPERFAMILY SSF47781 100 169 6.67E-12 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Pfam PF14490 Helix-hairpin-helix containing domain 153 241 9.2E-30 T 22-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 13 729 28.161 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SUPERFAMILY SSF52540 192 491 6.98E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 PANTHER PTHR10887:SF284 653 706 9.1E-111 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 PANTHER PTHR10887:SF284 325 588 9.1E-111 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SUPERFAMILY SSF52540 553 716 1.33E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SUPERFAMILY SSF52540 443 509 1.33E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Pfam PF14520 Helix-hairpin-helix domain 102 151 1.8E-11 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 PANTHER PTHR10887 653 706 9.1E-111 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 PANTHER PTHR10887 325 588 9.1E-111 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 210 726 28.678 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SMART SM00278 194 213 71.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 SMART SM00278 130 149 0.079 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Gene3D G3DSA:3.40.50.300 293 514 4.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 16 724 1.4E-212 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Gene3D G3DSA:3.40.50.300 653 703 6.7E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Gene3D G3DSA:1.10.150.20 102 170 3.2E-6 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Pfam PF13604 AAA domain 332 513 5.7E-47 T 22-04-2016 AMK58_RS04520 8cee132cf338629ccd061047d617cfdc 729 Pfam PF13538 UvrD-like helicase C-terminal domain 653 699 3.0E-17 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 SUPERFAMILY SSF51206 233 364 1.57E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 307 324 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 SUPERFAMILY SSF50182 50 117 2.71E-16 T 22-04-2016 IPR010920 LSM domain AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 Pfam PF00027 Cyclic nucleotide-binding domain 259 344 3.6E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 PANTHER PTHR30221 3 248 4.8E-35 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 SMART SM00100 240 357 2.3E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 Gene3D G3DSA:2.30.30.60 66 116 1.9E-17 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 Pfam PF00924 Mechanosensitive ion channel 9 207 1.6E-34 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 SUPERFAMILY SSF82689 123 218 1.26E-11 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 PRINTS PR00103 cAMP-dependent protein kinase signature 305 314 7.0E-6 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 PRINTS PR00103 cAMP-dependent protein kinase signature 317 328 7.0E-6 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 PRINTS PR00103 cAMP-dependent protein kinase signature 261 275 7.0E-6 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 Gene3D G3DSA:3.30.70.100 124 205 5.7E-5 T 22-04-2016 AMK58_RS08990 8d76265592ecdfcc95ea5d98dc727be6 394 Gene3D G3DSA:2.60.120.10 232 362 5.7E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS01875 5105dd372f6437d3f1baf07a4d04a252 325 Pfam PF08878 Domain of unknown function (DUF1837) 56 305 1.3E-53 T 22-04-2016 IPR014976 Protein of unknown function DUF1837 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 250 38.208 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 Pfam PF00121 Triosephosphate isomerase 6 246 2.0E-80 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 241 3.9E-56 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 PANTHER PTHR21139 1 246 9.3E-107 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 SUPERFAMILY SSF51351 3 247 6.41E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 Gene3D G3DSA:3.20.20.70 4 248 6.7E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS06440 455c27c5998617a45d6f48e0b7aadea7 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 SUPERFAMILY SSF56317 243 494 7.72E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 79 476 1.5E-92 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 25 515 20.865 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 PANTHER PTHR38686 18 529 4.9E-57 T 22-04-2016 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 Gene3D G3DSA:3.60.110.10 317 492 2.8E-21 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS00720 042937de63f09d3874cc9fce86f9d301 529 Pfam PF00795 Carbon-nitrogen hydrolase 247 494 9.3E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS04140 62a01f30e0f874367d6d09c65cb3f113 686 TIGRFAM TIGR01561 gde_arch: putative glycogen debranching enzyme, archaeal type 24 620 6.9E-115 T 22-04-2016 IPR006451 Glycogen debranching enzyme, archaeal type AMK58_RS04140 62a01f30e0f874367d6d09c65cb3f113 686 Pfam PF12439 Glycogen debranching enzyme N terminal 23 251 2.5E-57 T 22-04-2016 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal AMK58_RS04140 62a01f30e0f874367d6d09c65cb3f113 686 SUPERFAMILY SSF48208 211 679 3.21E-75 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK58_RS04140 62a01f30e0f874367d6d09c65cb3f113 686 PANTHER PTHR10569 313 679 7.5E-115 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK58_RS04140 62a01f30e0f874367d6d09c65cb3f113 686 Pfam PF06202 Amylo-alpha-1,6-glucosidase 321 677 2.0E-120 T 22-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK58_RS22400 6030c6e32af17e1710a20c1602fd20dc 60 SUPERFAMILY SSF52540 1 60 1.23E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS22400 6030c6e32af17e1710a20c1602fd20dc 60 Gene3D G3DSA:3.40.50.300 1 60 2.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS22400 6030c6e32af17e1710a20c1602fd20dc 60 PANTHER PTHR24220:SF150 1 60 8.2E-24 T 22-04-2016 AMK58_RS22400 6030c6e32af17e1710a20c1602fd20dc 60 PANTHER PTHR24220 1 60 8.2E-24 T 22-04-2016 AMK58_RS22400 6030c6e32af17e1710a20c1602fd20dc 60 Pfam PF00005 ABC transporter 1 59 4.1E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS11805 9c48da944ba29f41153972a832d91c62 237 Pfam PF04340 Protein of unknown function, DUF484 12 232 3.1E-35 T 22-04-2016 IPR007435 Protein of unknown function DUF484 AMK58_RS11805 9c48da944ba29f41153972a832d91c62 237 PANTHER PTHR38765 4 234 2.1E-13 T 22-04-2016 AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 SMART SM00100 17 134 8.9E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 SMART SM00116 225 272 7.7 T 22-04-2016 IPR000644 CBS domain AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 SMART SM00116 161 208 3.2E-7 T 22-04-2016 IPR000644 CBS domain AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Pfam PF00027 Cyclic nucleotide-binding domain 36 118 3.5E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 614 1.9E-43 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Gene3D G3DSA:3.10.580.10 150 268 8.8E-31 T 22-04-2016 AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 PANTHER PTHR11911 151 268 1.7E-24 T 22-04-2016 AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 SUPERFAMILY SSF51206 7 128 2.62E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 SUPERFAMILY SSF54631 150 269 1.26E-29 T 22-04-2016 AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 434 1.3E-47 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Gene3D G3DSA:2.60.120.10 7 119 6.5E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Pfam PF00571 CBS domain 218 268 9.1E-7 T 22-04-2016 IPR000644 CBS domain AMK58_RS11050 2794568d39ac1cce31673acafa595f9c 619 Pfam PF00571 CBS domain 154 207 3.8E-10 T 22-04-2016 IPR000644 CBS domain AMK58_RS02795 93b3df517835d760bc839b9cefc5e9f5 274 Gene3D G3DSA:3.30.420.10 6 197 8.5E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02795 93b3df517835d760bc839b9cefc5e9f5 274 SUPERFAMILY SSF53098 5 207 2.73E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02795 93b3df517835d760bc839b9cefc5e9f5 274 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 28 243 1.1E-59 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 Gene3D G3DSA:3.40.50.300 3 210 8.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 201 1.3E-49 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 Pfam PF02224 Cytidylate kinase 5 203 2.0E-53 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 SUPERFAMILY SSF52540 1 212 1.28E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 PANTHER PTHR21299 4 201 4.9E-46 T 22-04-2016 AMK58_RS12650 b368cdce3bd137f48e26ce05fc145d76 220 Hamap MF_00238 Cytidylate kinase [cmk]. 3 214 30.311 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 PANTHER PTHR34183:SF2 43 180 1.4E-43 T 22-04-2016 AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 Gene3D G3DSA:2.40.40.10 93 145 5.0E-6 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 SUPERFAMILY SSF50685 61 144 4.19E-12 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 PANTHER PTHR34183 43 180 1.4E-43 T 22-04-2016 AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 Pfam PF03330 Lytic transglycolase 57 145 4.7E-24 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS10950 4efd542bd3069a928aa111af6d40372b 204 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 58 175 5.4E-39 T 22-04-2016 IPR012997 Rare lipoprotein A AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 PANTHER PTHR34203 221 396 3.1E-13 T 22-04-2016 AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 SUPERFAMILY SSF53335 229 420 5.41E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 Gene3D G3DSA:3.40.50.150 250 421 9.2E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 Gene3D G3DSA:3.90.550.10 51 206 5.8E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 269 402 2.0E-23 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 SUPERFAMILY SSF53448 14 191 2.25E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 Pfam PF05050 Methyltransferase FkbM domain 271 406 3.0E-13 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMK58_RS01305 eea089fe92442cccca4b569fbe86a7e4 438 PANTHER PTHR34203:SF2 221 396 3.1E-13 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 9 908 17.382 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 SUPERFAMILY SSF50447 581 664 4.12E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 SUPERFAMILY SSF50447 812 908 2.95E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 410 564 5.2E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Gene3D G3DSA:2.40.30.10 579 673 1.4E-23 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Gene3D G3DSA:2.40.30.10 812 908 2.1E-37 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Pfam PF00009 Elongation factor Tu GTP binding domain 412 568 2.3E-33 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 ProSitePatterns PS01176 Initiation factor 2 signature. 861 883 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 PANTHER PTHR23115:SF184 763 910 6.7E-204 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 PANTHER PTHR23115:SF184 386 736 6.7E-204 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Gene3D G3DSA:3.40.50.10050 709 789 9.1E-27 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 PANTHER PTHR23115 763 910 6.7E-204 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 PANTHER PTHR23115 386 736 6.7E-204 T 22-04-2016 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Pfam PF11987 Translation-initiation factor 2 694 800 6.9E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 332 381 1.1E-15 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 324 908 1.7E-251 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 SUPERFAMILY SSF52540 405 580 1.13E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 SUPERFAMILY SSF52156 691 817 3.14E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Gene3D G3DSA:3.40.50.300 408 567 6.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00760 e338fde8000930e6f0f01bf978cb9847 910 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 20 56 3.7E-8 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 Pfam PF01476 LysM domain 308 351 4.4E-7 T 22-04-2016 IPR018392 LysM domain AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 Gene3D G3DSA:3.10.350.10 308 356 2.4E-6 T 22-04-2016 IPR018392 LysM domain AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 PANTHER PTHR34700:SF1 311 355 2.0E-12 T 22-04-2016 AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 SUPERFAMILY SSF54106 306 356 3.53E-5 T 22-04-2016 IPR018392 LysM domain AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 SMART SM00257 306 355 0.0079 T 22-04-2016 IPR018392 LysM domain AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 Gene3D G3DSA:2.60.40.10 219 277 4.1E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS09925 072f3640f8e80ee4b6760c1e2958b401 358 PANTHER PTHR34700 311 355 2.0E-12 T 22-04-2016 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 SUPERFAMILY SSF69287 20 78 5.1E-13 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 Hamap MF_00822 Urease accessory protein UreE [ureE]. 6 147 22.089 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 Pfam PF05194 UreE urease accessory protein, C-terminal domain 79 168 4.0E-20 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 Pfam PF02814 UreE urease accessory protein, N-terminal domain 14 70 1.2E-16 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 Gene3D G3DSA:2.60.260.20 19 76 1.6E-10 T 22-04-2016 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 SUPERFAMILY SSF69737 79 146 2.09E-18 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 Gene3D G3DSA:3.30.70.790 79 150 6.9E-27 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK58_RS07095 9a9d57a3bed824ca7e4dd2aa33df2165 191 SMART SM00988 7 72 1.1E-14 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 133 5.4E-41 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Gene3D G3DSA:3.40.120.10 253 369 2.1E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Gene3D G3DSA:3.40.120.10 178 252 3.4E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Gene3D G3DSA:3.40.120.10 3 139 9.5E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 SUPERFAMILY SSF53738 260 360 2.75E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 PANTHER PTHR22573:SF15 3 455 4.1E-158 T 22-04-2016 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 3.6E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 8.6E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 8.6E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 8.6E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 3.0E-186 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Gene3D G3DSA:3.30.310.50 373 446 1.1E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 445 9.6E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 6.0E-34 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 SUPERFAMILY SSF53738 158 259 1.41E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 PANTHER PTHR22573 3 455 4.1E-158 T 22-04-2016 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 SUPERFAMILY SSF53738 2 183 1.53E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 SUPERFAMILY SSF55957 363 448 7.46E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS05990 908aaf3f1e4c4080f75476a2b8d8580b 455 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 448 45.907 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 131 1.2E-28 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Gene3D G3DSA:1.25.40.10 348 392 3.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Gene3D G3DSA:1.25.40.10 155 207 5.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Gene3D G3DSA:1.25.40.10 393 472 6.3E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Gene3D G3DSA:1.25.40.10 208 291 2.5E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 PANTHER PTHR23083 155 270 1.2E-20 T 22-04-2016 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 PANTHER PTHR23083 350 475 1.2E-20 T 22-04-2016 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Pfam PF13432 Tetratricopeptide repeat 413 466 4.2E-5 T 22-04-2016 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Pfam PF13432 Tetratricopeptide repeat 224 268 4.8E-4 T 22-04-2016 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 Pfam PF13432 Tetratricopeptide repeat 164 198 0.012 T 22-04-2016 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SMART SM00028 171 204 0.0083 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SMART SM00028 242 275 250.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SMART SM00028 355 388 7.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SUPERFAMILY SSF48452 230 279 1.39E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SUPERFAMILY SSF48452 344 456 1.39E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01405 08591ca64f415432ac341d653231b809 482 SUPERFAMILY SSF48452 155 265 1.17E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02675 6bab3fbb3391e64848096925400efb0e 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 116 2.7E-17 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMK58_RS02675 6bab3fbb3391e64848096925400efb0e 131 SUPERFAMILY SSF81343 16 127 6.38E-29 T 22-04-2016 AMK58_RS02675 6bab3fbb3391e64848096925400efb0e 131 Gene3D G3DSA:1.20.1300.10 16 126 5.9E-26 T 22-04-2016 AMK58_RS02675 6bab3fbb3391e64848096925400efb0e 131 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 21 124 2.6E-25 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 AMK58_RS20065 a144fde3a9df53bd7b35d64e7b3fe5a8 149 Gene3D G3DSA:3.60.120.10 15 149 8.3E-43 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS20065 a144fde3a9df53bd7b35d64e7b3fe5a8 149 PANTHER PTHR11236 16 149 5.4E-53 T 22-04-2016 AMK58_RS20065 a144fde3a9df53bd7b35d64e7b3fe5a8 149 SUPERFAMILY SSF56322 16 149 1.15E-39 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS20065 a144fde3a9df53bd7b35d64e7b3fe5a8 149 Pfam PF00425 chorismate binding enzyme 59 149 2.0E-26 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK58_RS20065 a144fde3a9df53bd7b35d64e7b3fe5a8 149 PANTHER PTHR11236:SF9 16 149 5.4E-53 T 22-04-2016 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 Gene3D G3DSA:3.40.1130.10 74 191 1.6E-10 T 22-04-2016 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 PANTHER PTHR10434 223 266 3.8E-30 T 22-04-2016 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 PANTHER PTHR10434 20 199 3.8E-30 T 22-04-2016 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 Pfam PF01553 Acyltransferase 70 191 3.4E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 SMART SM00563 78 194 1.6E-24 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK58_RS00695 2c0e6388dfe295cfbff437f394200509 277 SUPERFAMILY SSF69593 26 264 1.23E-29 T 22-04-2016 AMK58_RS05435 84ddb983678730f87814addf254aa096 312 Pfam PF02511 Thymidylate synthase complementing protein 46 256 2.5E-57 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS05435 84ddb983678730f87814addf254aa096 312 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 40 270 29.496 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS05435 84ddb983678730f87814addf254aa096 312 SUPERFAMILY SSF69796 37 271 1.24E-71 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS05435 84ddb983678730f87814addf254aa096 312 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 44 262 3.0E-65 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 SUPERFAMILY SSF52540 88 240 2.58E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 Gene3D G3DSA:3.40.50.300 87 232 8.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 SMART SM00382 99 231 7.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 PANTHER PTHR30050 4 245 3.7E-69 T 22-04-2016 AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 Pfam PF01695 IstB-like ATP binding protein 54 231 7.9E-63 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 AMK58_RS13470 d08bbd231227a96b6f189aecb8ef4874 261 PIRSF PIRSF003073 1 252 3.6E-85 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 SUPERFAMILY SSF50193 1 122 3.53E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.8E-58 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 SMART SM01374 1 122 3.3E-87 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.195 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 PANTHER PTHR11761 1 122 2.1E-76 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10355 2c26ded3b233f1adc85854608a8b6d83 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.8E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 Pfam PF00664 ABC transporter transmembrane region 39 302 3.9E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 Pfam PF00005 ABC transporter 368 517 1.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 SMART SM00382 377 563 1.8E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 SUPERFAMILY SSF52540 341 588 1.71E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 Gene3D G3DSA:1.20.1560.10 19 331 5.8E-77 T 22-04-2016 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 Gene3D G3DSA:3.40.50.300 349 581 2.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 PANTHER PTHR24221 11 596 1.5E-243 T 22-04-2016 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 SUPERFAMILY SSF90123 19 336 1.26E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS10245 271e0c1826dcf21a4dca68e4b67e37ae 600 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 588 2.3E-266 T 22-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein AMK58_RS08380 9174cf8348128b220d2084e46d2b4a4f 149 PANTHER PTHR23091 6 146 3.5E-24 T 22-04-2016 AMK58_RS08380 9174cf8348128b220d2084e46d2b4a4f 149 SUPERFAMILY SSF55729 1 148 1.35E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS08380 9174cf8348128b220d2084e46d2b4a4f 149 PANTHER PTHR23091:SF275 6 146 3.5E-24 T 22-04-2016 AMK58_RS08380 9174cf8348128b220d2084e46d2b4a4f 149 Pfam PF13673 Acetyltransferase (GNAT) domain 47 148 5.3E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS08380 9174cf8348128b220d2084e46d2b4a4f 149 Gene3D G3DSA:3.40.630.30 3 147 8.7E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Gene3D G3DSA:1.50.10.10 414 569 5.3E-11 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Gene3D G3DSA:1.50.10.10 210 323 2.7E-9 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Gene3D G3DSA:1.50.10.10 361 379 2.7E-9 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 SUPERFAMILY SSF48208 190 527 3.06E-73 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 PANTHER PTHR12145 3 672 1.6E-250 T 22-04-2016 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 PANTHER PTHR12145:SF11 3 672 1.6E-250 T 22-04-2016 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Pfam PF03190 Protein of unknown function, DUF255 4 164 9.7E-72 T 22-04-2016 IPR004879 Domain of unknown function DUF255 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 SUPERFAMILY SSF52833 3 130 2.31E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 PIRSF PIRSF006402 1 672 1.7E-214 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Gene3D G3DSA:3.40.30.10 21 148 1.4E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00385 c31251bf4a258d13031d216b2d2d7554 672 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 417 566 4.3E-4 T 22-04-2016 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 Gene3D G3DSA:1.10.10.10 10 110 1.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 PANTHER PTHR33154 14 116 3.8E-23 T 22-04-2016 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 Pfam PF01022 Bacterial regulatory protein, arsR family 33 78 1.7E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 SUPERFAMILY SSF46785 14 106 5.79E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.4E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 1.4E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 1.4E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS07135 68f90b3c20cee4087b64d9dac561af84 116 SMART SM00418 26 104 1.5E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 Gene3D G3DSA:3.30.70.1230 222 406 4.2E-33 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 SMART SM00044 186 389 1.0E-6 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 PANTHER PTHR11920:SF348 35 52 1.4E-57 T 22-04-2016 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 PANTHER PTHR11920:SF348 213 402 1.4E-57 T 22-04-2016 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 402 2.6E-20 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 PANTHER PTHR11920 35 52 1.4E-57 T 22-04-2016 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 PANTHER PTHR11920 213 402 1.4E-57 T 22-04-2016 AMK58_RS00650 c47ba3c9cd5279359033041050e026b4 414 SUPERFAMILY SSF55073 216 403 1.18E-46 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 98 114 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 199 211 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 76 89 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 168 180 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 SUPERFAMILY SSF55920 12 260 3.93E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 174 192 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PANTHER PTHR10804:SF82 10 268 1.2E-130 T 22-04-2016 AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 Gene3D G3DSA:3.90.230.10 12 258 4.8E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 Hamap MF_01974 Methionine aminopeptidase [map]. 11 257 41.634 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 11 256 1.1E-92 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 PANTHER PTHR10804 10 268 1.2E-130 T 22-04-2016 AMK58_RS11395 919cb4251903a92b766babe95e0f7e9c 277 Pfam PF00557 Metallopeptidase family M24 20 248 4.0E-52 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.30.450.20 513 629 2.6E-28 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 645 806 1.0E-40 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 PANTHER PTHR10799:SF774 339 919 2.3E-79 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.30.70.270 650 817 2.8E-56 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Pfam PF00563 EAL domain 825 1059 5.7E-70 T 22-04-2016 IPR001633 EAL domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Pfam PF13426 PAS domain 534 636 1.3E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.30.450.20 80 233 7.1E-36 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.30.450.20 235 345 6.2E-31 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SUPERFAMILY SSF141868 824 1072 2.88E-88 T 22-04-2016 IPR001633 EAL domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SUPERFAMILY SSF55785 425 523 2.97E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.20.20.450 823 1071 4.0E-94 T 22-04-2016 IPR001633 EAL domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 420 522 3.2E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 527 643 2.3E-21 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Pfam PF13188 PAS domain 409 469 0.036 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SUPERFAMILY SSF55785 528 635 4.71E-28 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 PANTHER PTHR10799 339 919 2.3E-79 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00267 637 809 6.5E-63 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SUPERFAMILY SSF55073 653 811 1.1E-48 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Gene3D G3DSA:3.30.450.20 419 512 1.7E-10 T 22-04-2016 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Pfam PF08269 Cache domain 51 345 6.0E-73 T 22-04-2016 IPR004010 Double Cache domain 2 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 Pfam PF00990 Diguanylate cyclase, GGDEF domain 648 804 6.7E-47 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00086 475 515 0.065 T 22-04-2016 IPR001610 PAC motif AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00086 595 637 7.7E-4 T 22-04-2016 IPR001610 PAC motif AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00091 414 484 8.9 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00091 523 589 7.6E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM01049 226 293 3.1 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM01049 86 180 3.3E-19 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS11410 ed3108d105994042a64f2a3a38e2ed47 1080 SMART SM00052 819 1064 1.1E-110 T 22-04-2016 IPR001633 EAL domain AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PANTHER PTHR22773:SF50 74 644 3.9E-261 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 322 344 9.1E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 134 154 9.1E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 476 498 9.1E-12 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 Pfam PF00361 Proton-conducting membrane transporter 183 473 8.3E-92 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 282 303 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 304 330 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 372 384 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 132 157 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 207 228 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 180 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 477 496 6.6E-64 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 PANTHER PTHR22773 74 644 3.9E-261 T 22-04-2016 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 568 688 5.8E-8 T 22-04-2016 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 114 171 4.9E-24 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMK58_RS06175 8980f63cad3d47cc24ef93ac65a95b42 695 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 76 691 4.9E-259 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:3.90.1200.10 859 1056 1.5E-5 T 22-04-2016 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 576 1102 3.2E-158 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SUPERFAMILY SSF51445 365 472 3.82E-128 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SUPERFAMILY SSF51445 15 338 3.82E-128 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 PANTHER PTHR10357:SF164 451 586 1.7E-285 T 22-04-2016 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 PANTHER PTHR10357:SF164 1 412 1.7E-285 T 22-04-2016 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SUPERFAMILY SSF56112 738 820 9.39E-16 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SUPERFAMILY SSF56112 861 1079 9.39E-16 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SUPERFAMILY SSF51011 479 559 5.04E-16 T 22-04-2016 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 556 4.1E-27 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 16 559 8.5E-282 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 SMART SM00642 24 427 4.9E-104 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:3.90.400.10 116 184 3.1E-23 T 22-04-2016 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:3.20.20.80 454 468 5.9E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:3.20.20.80 18 115 5.9E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:3.20.20.80 192 421 5.9E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 PANTHER PTHR10357 451 586 1.7E-285 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 PANTHER PTHR10357 1 412 1.7E-285 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Pfam PF00128 Alpha amylase, catalytic domain 39 396 4.7E-77 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08890 5e60f597985ee11e99e7e6781c9d5bbe 1107 Gene3D G3DSA:2.60.40.1180 475 559 3.0E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 247 337 3.1E-10 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 Pfam PF04055 Radical SAM superfamily 20 173 1.5E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 PANTHER PTHR11228 11 347 5.3E-99 T 22-04-2016 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 10 364 1.4E-162 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 Gene3D G3DSA:3.20.20.70 12 328 3.1E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 PANTHER PTHR11228:SF32 11 347 5.3E-99 T 22-04-2016 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 Pfam PF13186 Iron-sulfur cluster-binding domain 244 310 3.8E-9 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 PIRSF PIRSF037420 4 355 7.7E-108 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 SUPERFAMILY SSF102114 12 319 1.31E-67 T 22-04-2016 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 368 169.064 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 Pfam PF13353 4Fe-4S single cluster domain 21 89 3.8E-6 T 22-04-2016 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 SMART SM00729 14 221 6.3E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS06470 60ef385d24288a5ed6295f9c61a834ed 368 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 Gene3D G3DSA:3.30.43.10 9 109 6.3E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 Pfam PF01565 FAD binding domain 55 191 1.4E-39 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 SUPERFAMILY SSF55103 236 483 1.36E-59 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 PANTHER PTHR11748 8 483 2.9E-208 T 22-04-2016 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 SUPERFAMILY SSF56176 17 231 4.35E-77 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 480 4.3E-58 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 Gene3D G3DSA:1.10.45.10 442 481 1.3E-11 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 Gene3D G3DSA:3.30.465.10 110 231 9.4E-38 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS04855 c96955f24096759144c93e4c18e4f5c6 483 PANTHER PTHR11748:SF76 8 483 2.9E-208 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089 216 258 1.4E-89 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089 371 650 1.4E-89 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089 277 338 1.4E-89 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 SMART SM00283 393 647 2.9E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 SUPERFAMILY SSF58104 330 358 7.06E-57 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 SUPERFAMILY SSF58104 399 646 7.06E-57 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 SMART SM00304 303 356 3.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 Gene3D G3DSA:1.10.287.950 410 616 7.8E-45 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 2.1E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 518 2.1E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 2.1E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 Pfam PF00672 HAMP domain 286 353 2.8E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 SMART SM01358 40 274 4.7E-8 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 646 2.0E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089:SF40 216 258 1.4E-89 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089:SF40 371 650 1.4E-89 T 22-04-2016 AMK58_RS07770 dd42349f10e3c4b773cd8748f250d7df 652 PANTHER PTHR32089:SF40 277 338 1.4E-89 T 22-04-2016 AMK58_RS04495 287dd82a51831c6b0674fcd672e60116 292 SUPERFAMILY SSF53187 13 283 5.65E-87 T 22-04-2016 AMK58_RS04495 287dd82a51831c6b0674fcd672e60116 292 Pfam PF05013 N-formylglutamate amidohydrolase 25 256 3.4E-74 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase AMK58_RS04495 287dd82a51831c6b0674fcd672e60116 292 Gene3D G3DSA:3.40.630.40 10 283 1.2E-100 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS01745 7eafa7ce5c4dc17f04566214ad7e37d3 102 Pfam PF12728 Helix-turn-helix domain 48 94 4.7E-9 T 22-04-2016 AMK58_RS01745 7eafa7ce5c4dc17f04566214ad7e37d3 102 SUPERFAMILY SSF46955 47 94 6.04E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SUPERFAMILY SSF82185 640 766 7.85E-26 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF02493 MORN repeat 599 612 4.8 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF02493 MORN repeat 692 714 0.77 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF02493 MORN repeat 669 690 2.8E-4 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF02493 MORN repeat 632 644 1.3 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF02493 MORN repeat 646 668 4.7E-7 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Gene3D G3DSA:2.20.110.10 671 766 3.1E-20 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Gene3D G3DSA:2.20.110.10 599 670 1.2E-18 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 PANTHER PTHR23084 600 766 2.2E-40 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SUPERFAMILY SSF52129 24 268 2.54E-24 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00287 419 482 0.042 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00287 329 393 0.018 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF00656 Caspase domain 38 257 8.5E-15 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00698 667 688 0.6 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00698 611 642 0.63 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00698 644 665 6.3E-4 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 SMART SM00698 690 711 4.1 T 22-04-2016 IPR003409 MORN motif AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Gene3D G3DSA:2.30.30.40 444 474 1.8E-5 T 22-04-2016 AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF08239 Bacterial SH3 domain 428 479 2.8E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Pfam PF08239 Bacterial SH3 domain 338 389 2.8E-12 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS10660 61dfd6deb40ae4a2461773740b073c2b 773 Gene3D G3DSA:3.40.50.1460 36 126 5.8E-5 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 Gene3D G3DSA:3.40.50.620 3 140 7.5E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 PRINTS PR01438 Universal stress protein signature 257 279 2.7E-8 T 22-04-2016 IPR006015 Universal stress protein A AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 PRINTS PR01438 Universal stress protein signature 239 251 2.7E-8 T 22-04-2016 IPR006015 Universal stress protein A AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 PRINTS PR01438 Universal stress protein signature 154 172 2.7E-8 T 22-04-2016 IPR006015 Universal stress protein A AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 Gene3D G3DSA:3.40.50.620 141 279 7.1E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 Pfam PF00582 Universal stress protein family 155 277 1.9E-12 T 22-04-2016 IPR006016 UspA GO:0006950 AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 Pfam PF00582 Universal stress protein family 5 144 4.4E-5 T 22-04-2016 IPR006016 UspA GO:0006950 AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 SUPERFAMILY SSF52402 155 278 8.37E-22 T 22-04-2016 AMK58_RS12120 6e6376e6625ec5459d8507e8a56f3059 279 SUPERFAMILY SSF52402 2 145 7.12E-13 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Pfam PF00384 Molybdopterin oxidoreductase 271 598 1.7E-74 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 PANTHER PTHR11615 351 674 0.0 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 PANTHER PTHR11615 3 297 0.0 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 PANTHER PTHR11615:SF115 351 674 0.0 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 PANTHER PTHR11615:SF115 3 297 0.0 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 SUPERFAMILY SSF54292 1 74 5.91E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 5.0E-18 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 SMART SM00929 83 123 6.4E-22 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 120 9.7E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 596 8.0E-230 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 637 671 1.2E-13 T 22-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 SUPERFAMILY SSF53706 213 627 1.93E-106 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 SUPERFAMILY SSF54862 75 211 7.53E-39 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Gene3D G3DSA:3.10.20.30 5 54 2.2E-5 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Gene3D G3DSA:3.40.50.740 271 406 1.2E-52 T 22-04-2016 AMK58_RS06150 775a7cc531a6e899355592669c631578 694 Gene3D G3DSA:3.40.50.740 494 626 1.2E-52 T 22-04-2016 AMK58_RS12750 24211c9d19f7a4d38ed60c0f10e369a6 636 SUPERFAMILY SSF52266 429 628 1.58E-5 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS12750 24211c9d19f7a4d38ed60c0f10e369a6 636 PANTHER PTHR23028:SF53 1 545 2.9E-95 T 22-04-2016 AMK58_RS12750 24211c9d19f7a4d38ed60c0f10e369a6 636 Pfam PF01757 Acyltransferase family 5 327 2.3E-26 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK58_RS12750 24211c9d19f7a4d38ed60c0f10e369a6 636 Gene3D G3DSA:3.40.50.1110 513 630 8.3E-4 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS12750 24211c9d19f7a4d38ed60c0f10e369a6 636 PANTHER PTHR23028 1 545 2.9E-95 T 22-04-2016 AMK58_RS13365 d5b86194a9d9bd0a116b861257d4759e 117 SUPERFAMILY SSF47413 3 71 5.09E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS13365 d5b86194a9d9bd0a116b861257d4759e 117 Gene3D G3DSA:1.10.260.40 9 108 1.6E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS13365 d5b86194a9d9bd0a116b861257d4759e 117 SMART SM00530 12 67 5.0E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13365 d5b86194a9d9bd0a116b861257d4759e 117 Pfam PF13560 Helix-turn-helix domain 9 63 2.1E-12 T 22-04-2016 AMK58_RS07520 acd2b028cc354967dcd55327f8078162 188 Pfam PF09361 Phasin protein 79 176 8.9E-19 T 22-04-2016 IPR018968 Phasin AMK58_RS05075 a37b74f3f2dc0efded7d5e82b0634033 360 Gene3D G3DSA:3.40.50.2000 177 329 5.5E-22 T 22-04-2016 AMK58_RS05075 a37b74f3f2dc0efded7d5e82b0634033 360 Pfam PF13692 Glycosyl transferases group 1 183 314 6.5E-20 T 22-04-2016 AMK58_RS05075 a37b74f3f2dc0efded7d5e82b0634033 360 SUPERFAMILY SSF53756 25 350 6.28E-43 T 22-04-2016 AMK58_RS05075 a37b74f3f2dc0efded7d5e82b0634033 360 PANTHER PTHR12526 172 349 2.2E-27 T 22-04-2016 AMK58_RS00190 52e130d2661284dbe0f73b1ed9a7e924 195 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 188 4.9E-33 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS00190 52e130d2661284dbe0f73b1ed9a7e924 195 Gene3D G3DSA:3.40.50.1240 1 188 7.2E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS00190 52e130d2661284dbe0f73b1ed9a7e924 195 SMART SM00855 3 149 2.1E-17 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS00190 52e130d2661284dbe0f73b1ed9a7e924 195 PANTHER PTHR23029 4 188 1.5E-23 T 22-04-2016 AMK58_RS00190 52e130d2661284dbe0f73b1ed9a7e924 195 SUPERFAMILY SSF53254 1 183 6.21E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Gene3D G3DSA:1.10.1060.10 247 307 6.3E-7 T 22-04-2016 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 390 513 8.3E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Gene3D G3DSA:2.60.40.10 390 513 1.9E-29 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 60 502 1.3E-155 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 PANTHER PTHR24960 21 427 2.4E-115 T 22-04-2016 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Pfam PF12801 4Fe-4S binding domain 121 159 9.6E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 SUPERFAMILY SSF54862 198 361 5.65E-28 T 22-04-2016 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 SUPERFAMILY SSF54862 130 151 5.65E-28 T 22-04-2016 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Pfam PF13746 4Fe-4S dicluster domain 243 351 8.6E-44 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 Gene3D G3DSA:3.30.70.20 308 355 7.0E-7 T 22-04-2016 AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 299 310 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS01000 1c3853eb118b5a12b956a06ee84c01ce 515 PANTHER PTHR24960:SF45 21 427 2.4E-115 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 380 499 4.4E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SUPERFAMILY SSF55785 354 490 5.76E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF13188 PAS domain 384 433 8.5E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SUPERFAMILY SSF52172 759 877 1.71E-30 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 508 570 7.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF12860 PAS fold 247 362 4.9E-17 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:3.30.450.20 355 490 5.2E-13 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00086 452 492 6.6 T 22-04-2016 IPR001610 PAC motif AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00086 187 229 0.52 T 22-04-2016 IPR001610 PAC motif AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PANTHER PTHR24423 84 224 6.5E-123 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PANTHER PTHR24423 353 878 6.5E-123 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF00072 Response regulator receiver domain 761 873 1.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00091 114 181 0.96 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00091 241 308 98.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00091 383 449 19.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SUPERFAMILY SSF55785 103 223 1.12E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SUPERFAMILY SSF47384 500 570 4.71E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 737 1.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00388 507 573 4.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Pfam PF13426 PAS domain 126 227 1.4E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SUPERFAMILY SSF55874 563 739 1.26E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 695 7.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 736 7.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 716 7.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 681 7.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:1.10.287.130 502 559 2.3E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:3.30.565.10 560 739 2.3E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:3.30.450.20 244 354 2.5E-5 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PANTHER PTHR24423:SF438 84 224 6.5E-123 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 PANTHER PTHR24423:SF438 353 878 6.5E-123 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:3.30.450.20 105 224 3.3E-18 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 Gene3D G3DSA:3.40.50.2300 758 877 4.9E-31 T 22-04-2016 AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00387 615 739 1.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06635 14e845c9e3e864fb61631127792159e1 878 SMART SM00448 759 872 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04610 ac932b5aeb5a3676535e2e68a0c12b6f 97 Gene3D G3DSA:3.30.70.20 14 94 9.6E-13 T 22-04-2016 AMK58_RS04610 ac932b5aeb5a3676535e2e68a0c12b6f 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 28 39 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS04610 ac932b5aeb5a3676535e2e68a0c12b6f 97 SUPERFAMILY SSF54862 13 94 7.53E-14 T 22-04-2016 AMK58_RS04610 ac932b5aeb5a3676535e2e68a0c12b6f 97 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 6 94 1.6E-40 T 22-04-2016 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific AMK58_RS04610 ac932b5aeb5a3676535e2e68a0c12b6f 97 Pfam PF14697 4Fe-4S dicluster domain 22 91 4.0E-9 T 22-04-2016 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 PANTHER PTHR11432 8 336 5.0E-191 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 PANTHER PTHR11432:SF3 8 336 5.0E-191 T 22-04-2016 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 331 25.958 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK58_RS06155 4c834da98c455541ef6606e6cc6dca1b 336 Pfam PF00146 NADH dehydrogenase 18 325 5.8E-133 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 PANTHER PTHR20858:SF17 4 263 7.4E-118 T 22-04-2016 AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 Gene3D G3DSA:3.40.1190.20 4 259 5.0E-100 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 PANTHER PTHR20858 4 263 7.4E-118 T 22-04-2016 AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 Pfam PF08543 Phosphomethylpyrimidine kinase 12 257 8.3E-92 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 258 1.7E-99 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMK58_RS05995 ee172697f0b3116c33d6a5b3eb773853 266 SUPERFAMILY SSF53613 3 261 3.12E-80 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 SUPERFAMILY SSF53807 11 434 1.6E-123 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 PANTHER PTHR33712 223 437 9.7E-95 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 PANTHER PTHR33712 12 204 9.7E-95 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 40 47 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 Gene3D G3DSA:3.40.50.1980 166 264 3.0E-26 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 22 428 3.3E-112 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 Gene3D G3DSA:3.40.50.1980 22 165 2.8E-41 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 Gene3D G3DSA:1.20.89.10 269 352 1.9E-27 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 PANTHER PTHR33712:SF2 223 437 9.7E-95 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 PANTHER PTHR33712:SF2 12 204 9.7E-95 T 22-04-2016 AMK58_RS04630 c3d4de6542eaa1779d62e4391ff4a395 466 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 9 429 2.7E-170 T 22-04-2016 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0006461|GO:0009399 UniPathway: UPA00782 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 Gene3D G3DSA:3.20.20.140 6 269 1.4E-21 T 22-04-2016 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 Pfam PF14579 Helix-hairpin-helix motif 814 906 2.0E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 SUPERFAMILY SSF160975 842 892 5.1E-6 T 22-04-2016 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1040 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 SMART SM00481 7 74 4.2E-19 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 305 739 5.9E-168 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 Pfam PF02811 PHP domain 8 184 1.6E-36 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 Gene3D G3DSA:1.10.150.280 839 892 5.8E-8 T 22-04-2016 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 PANTHER PTHR32294 2 1159 0.0 T 22-04-2016 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 PANTHER PTHR32294:SF0 2 1159 0.0 T 22-04-2016 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 SUPERFAMILY SSF89550 111 276 1.96E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK58_RS06260 ae2b7383a13557c03a67b4bd6e50d8d5 1160 SUPERFAMILY SSF89550 6 78 1.96E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 Gene3D G3DSA:1.10.3820.10 14 182 8.1E-27 T 22-04-2016 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 Gene3D G3DSA:1.10.3820.10 330 336 8.1E-27 T 22-04-2016 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 PANTHER PTHR30333:SF1 19 379 4.2E-100 T 22-04-2016 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 PIRSF PIRSF000014 6 382 1.2E-130 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 SUPERFAMILY SSF46626 305 378 1.87E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 180 9.6E-72 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 PANTHER PTHR30333 19 379 4.2E-100 T 22-04-2016 AMK58_RS13170 afedebc7fc8ade2a290c830d3c2f4ade 382 SUPERFAMILY SSF48695 16 181 5.24E-53 T 22-04-2016 IPR011031 Multihaem cytochrome AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PANTHER PTHR11732 153 347 3.3E-155 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PANTHER PTHR11732 1 135 3.3E-155 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PRINTS PR00069 Aldo-keto reductase signature 165 182 5.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PRINTS PR00069 Aldo-keto reductase signature 117 135 5.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 Gene3D G3DSA:3.20.20.100 1 345 1.4E-110 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 Pfam PF00248 Aldo/keto reductase family 16 339 3.8E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 SUPERFAMILY SSF51430 1 347 1.96E-109 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PANTHER PTHR11732:SF112 153 347 3.3E-155 T 22-04-2016 AMK58_RS13715 7f1b3b0e553811c3bf063332ed723312 347 PANTHER PTHR11732:SF112 1 135 3.3E-155 T 22-04-2016 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 SUPERFAMILY SSF48452 175 291 2.53E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 Pfam PF13174 Tetratricopeptide repeat 252 282 6.9E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 Pfam PF13432 Tetratricopeptide repeat 181 246 2.2E-11 T 22-04-2016 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 PANTHER PTHR26312 187 285 1.3E-15 T 22-04-2016 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 PANTHER PTHR26312 13 22 1.3E-15 T 22-04-2016 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 176 291 5.3E-38 T 22-04-2016 IPR014162 Tol-Pal system, YbgF AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 Gene3D G3DSA:1.25.40.10 174 293 1.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 PANTHER PTHR26312:SF74 187 285 1.3E-15 T 22-04-2016 AMK58_RS06500 3e8eeaa0c1d5b095f9af31bb06e16003 301 PANTHER PTHR26312:SF74 13 22 1.3E-15 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 SMART SM00382 56 203 1.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Gene3D G3DSA:1.10.8.60 191 266 8.2E-30 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 SUPERFAMILY SSF52540 22 265 8.91E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 22 382 4.8E-127 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 256 397 3.5E-51 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 PANTHER PTHR11669:SF0 7 397 6.1E-167 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Pfam PF13177 DNA polymerase III, delta subunit 39 201 1.6E-37 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 467 580 1.4E-38 T 22-04-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Gene3D G3DSA:3.40.50.300 34 190 3.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 Gene3D G3DSA:1.20.272.10 267 383 1.0E-25 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 PANTHER PTHR11669 7 397 6.1E-167 T 22-04-2016 AMK58_RS11895 00d5af6f3f3e91425ae21528e5ce25cd 621 SUPERFAMILY SSF48019 267 393 4.85E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK58_RS07935 3794bf46094ce7c6dd96981d2129c18f 384 Gene3D G3DSA:3.40.50.1820 38 186 1.2E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS07935 3794bf46094ce7c6dd96981d2129c18f 384 SUPERFAMILY SSF53474 43 182 2.94E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 PIRSF PIRSF006092 27 183 9.2E-46 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 51.94 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 PANTHER PTHR30437 1 187 1.1E-60 T 22-04-2016 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 25.947 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 183 1.8E-67 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 1.2E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 146 162 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Gene3D G3DSA:1.10.287.180 29 101 2.1E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 3.1E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 PANTHER PTHR30437:SF6 1 187 1.1E-60 T 22-04-2016 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 Gene3D G3DSA:3.10.50.30 107 183 2.2E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 SUPERFAMILY SSF54534 107 182 3.92E-19 T 22-04-2016 AMK58_RS10740 887942c2a816a858d97c7614282dcdf0 187 SUPERFAMILY SSF46557 29 103 3.79E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS04320 e530e8312c8457042a54fdea335f1191 203 SUPERFAMILY SSF89155 16 201 2.35E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone AMK58_RS04320 e530e8312c8457042a54fdea335f1191 203 Pfam PF02613 Nitrate reductase delta subunit 48 169 2.9E-30 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone AMK58_RS04320 e530e8312c8457042a54fdea335f1191 203 Gene3D G3DSA:1.10.3480.10 18 201 1.9E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone AMK58_RS04320 e530e8312c8457042a54fdea335f1191 203 PANTHER PTHR34227 15 202 7.1E-63 T 22-04-2016 AMK58_RS04320 e530e8312c8457042a54fdea335f1191 203 PANTHER PTHR34227:SF4 15 202 7.1E-63 T 22-04-2016 AMK58_RS13070 1a1600df4e685b4351efb8751e7d6a3e 520 Pfam PF01935 Domain of unknown function DUF87 14 81 1.2E-7 T 22-04-2016 IPR002789 Helicase HerA, central domain AMK58_RS13070 1a1600df4e685b4351efb8751e7d6a3e 520 Gene3D G3DSA:3.40.50.300 15 251 1.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13070 1a1600df4e685b4351efb8751e7d6a3e 520 SUPERFAMILY SSF52540 9 254 1.55E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13070 1a1600df4e685b4351efb8751e7d6a3e 520 PIRSF PIRSF034081 1 514 7.4E-239 T 22-04-2016 IPR014588 ATPase, Atu1862 type, predicted AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 20 250 5.7E-36 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 Gene3D G3DSA:3.40.50.1000 17 89 4.2E-32 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 Gene3D G3DSA:3.40.50.1000 202 288 4.2E-32 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 PANTHER PTHR19288 7 291 2.7E-70 T 22-04-2016 AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 Pfam PF13242 HAD-hyrolase-like 203 289 4.8E-14 T 22-04-2016 AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 10 249 2.8E-56 T 22-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 Pfam PF13344 Haloacid dehalogenase-like hydrolase 20 124 1.8E-17 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 PANTHER PTHR19288:SF3 7 291 2.7E-70 T 22-04-2016 AMK58_RS03055 64e276de9df81d8cf263c85a6cb4e956 291 SUPERFAMILY SSF56784 16 262 7.32E-49 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05105 38af7d52b87c72e94ecbc4b68d3e70e9 67 Pfam PF13467 Ribbon-helix-helix domain 1 62 5.9E-26 T 22-04-2016 IPR027373 Ribbon-helix-helix domain AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 PANTHER PTHR11964 6 383 1.0E-196 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 PIRSF PIRSF000497 1 388 6.4E-159 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 2.9E-39 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 48.701 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 104 2.6E-35 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 SUPERFAMILY SSF55973 5 111 2.55E-36 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 SUPERFAMILY SSF55973 235 386 5.49E-65 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 PANTHER PTHR11964:SF1 6 383 1.0E-196 T 22-04-2016 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 387 9.6E-152 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Gene3D G3DSA:3.30.300.10 13 135 3.8E-36 T 22-04-2016 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Gene3D G3DSA:3.30.300.10 246 388 4.4E-66 T 22-04-2016 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 SUPERFAMILY SSF55973 115 234 7.46E-46 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Gene3D G3DSA:3.30.300.10 136 235 1.1E-35 T 22-04-2016 AMK58_RS00730 1d853f9436706f638667674ac8320d5d 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 377 4.2E-65 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 PRINTS PR00313 NodO calcium binding signature 90 98 4.9E-12 T 22-04-2016 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 PRINTS PR00313 NodO calcium binding signature 117 126 4.9E-12 T 22-04-2016 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 PRINTS PR00313 NodO calcium binding signature 42 53 4.9E-12 T 22-04-2016 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 PRINTS PR00313 NodO calcium binding signature 72 80 4.9E-12 T 22-04-2016 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 86 104 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 77 95 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 59 77 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 SUPERFAMILY SSF51120 6 85 2.22E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 80 97 0.0017 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 107 124 0.032 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 43 0.0026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 47 61 0.0026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 63 79 0.0026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 Gene3D G3DSA:2.150.10.10 14 187 5.1E-37 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 SUPERFAMILY SSF51120 66 197 4.45E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04955 6b2227e7d9b1a43b926e55030bce8313 209 PANTHER PTHR38340 9 206 3.6E-15 T 22-04-2016 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 PANTHER PTHR23135:SF3 15 493 7.6E-134 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 PANTHER PTHR23135 15 493 7.6E-134 T 22-04-2016 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 SUPERFAMILY SSF63418 21 101 2.35E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 SUPERFAMILY SSF53623 108 320 8.5E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Pfam PF02875 Mur ligase family, glutamate ligase domain 336 406 2.6E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 465 32.366 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Gene3D G3DSA:3.90.190.20 328 465 5.9E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 464 1.1E-117 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 SUPERFAMILY SSF53244 329 464 3.43E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Gene3D G3DSA:3.40.1390.10 9 74 1.3E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Pfam PF01225 Mur ligase family, catalytic domain 29 74 5.7E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Pfam PF08245 Mur ligase middle domain 113 302 2.3E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03945 671a152526a3a5cf5e2a6b425238831a 498 Gene3D G3DSA:3.40.1190.10 90 320 2.7E-66 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 Pfam PF01571 Aminomethyltransferase folate-binding domain 15 111 5.9E-10 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 210 280 1.1E-8 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 PANTHER PTHR22602:SF0 7 276 3.4E-72 T 22-04-2016 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 Gene3D G3DSA:3.30.70.1400 14 98 4.3E-25 T 22-04-2016 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 SUPERFAMILY SSF103025 3 224 3.77E-56 T 22-04-2016 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 PANTHER PTHR22602 7 276 3.4E-72 T 22-04-2016 AMK58_RS05890 cf5478b12f21ef9674d7e3eaf9a80868 301 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 169 235 1.5E-22 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 PANTHER PTHR24423 134 164 8.2E-14 T 22-04-2016 AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 PANTHER PTHR24423 254 319 8.2E-14 T 22-04-2016 AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 PANTHER PTHR24423:SF438 254 319 8.2E-14 T 22-04-2016 AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 Gene3D G3DSA:3.30.450.20 94 214 6.4E-8 T 22-04-2016 AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 SUPERFAMILY SSF47384 245 318 1.26E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS15680 1c3d4be50260969357b8f5babb8ace9f 327 PANTHER PTHR24423:SF438 134 164 8.2E-14 T 22-04-2016 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 Gene3D G3DSA:1.10.560.10 3 188 3.1E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 3.4E-262 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 SUPERFAMILY SSF52029 184 376 1.01E-85 T 22-04-2016 IPR027409 GroEL-like apical domain AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 42.652 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 Gene3D G3DSA:1.10.560.10 367 519 1.8E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 SUPERFAMILY SSF48592 406 522 1.53E-78 T 22-04-2016 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 SUPERFAMILY SSF48592 7 134 1.53E-78 T 22-04-2016 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PRINTS PR00298 60kDa chaperonin signature 268 291 5.2E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PRINTS PR00298 60kDa chaperonin signature 83 110 5.2E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PRINTS PR00298 60kDa chaperonin signature 398 419 5.2E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PRINTS PR00298 60kDa chaperonin signature 27 53 5.2E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PRINTS PR00298 60kDa chaperonin signature 350 375 5.2E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 Gene3D G3DSA:3.50.7.10 189 366 1.8E-102 T 22-04-2016 IPR027409 GroEL-like apical domain AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 SUPERFAMILY SSF54849 138 203 6.64E-24 T 22-04-2016 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 PANTHER PTHR11353 2 546 4.7E-265 T 22-04-2016 AMK58_RS13185 c6d734df82ed2c66996d3bdc70b2e18e 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 3.6E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMK58_RS04835 d104b37dcfb34fb16476c542f04264e5 225 Gene3D G3DSA:2.40.160.20 29 170 2.7E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK58_RS04835 d104b37dcfb34fb16476c542f04264e5 225 SUPERFAMILY SSF56925 35 176 1.96E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 Gene3D G3DSA:3.30.70.20 3 91 6.6E-21 T 22-04-2016 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 PANTHER PTHR11938:SF101 1 82 4.3E-34 T 22-04-2016 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 Pfam PF00037 4Fe-4S binding domain 34 55 7.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 SUPERFAMILY SSF54862 2 103 6.44E-24 T 22-04-2016 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 Pfam PF11953 Domain of unknown function (DUF3470) 64 105 7.0E-20 T 22-04-2016 IPR022569 Ferredoxin, C-terminal AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 PANTHER PTHR11938 1 82 4.3E-34 T 22-04-2016 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.2E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.2E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS01215 f77ff3b1bbb82c9f277aa943b6359dbe 110 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.2E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS10810 afb417fb00580c4a49301d27823fa23e 149 PANTHER PTHR33452 1 134 1.1E-22 T 22-04-2016 AMK58_RS10810 afb417fb00580c4a49301d27823fa23e 149 Pfam PF07681 DoxX 17 95 1.5E-16 T 22-04-2016 IPR032808 DoxX family AMK58_RS10810 afb417fb00580c4a49301d27823fa23e 149 PANTHER PTHR33452:SF1 1 134 1.1E-22 T 22-04-2016 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 SUPERFAMILY SSF50486 207 313 6.28E-27 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 SUPERFAMILY SSF53328 1 206 5.36E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 Pfam PF02911 Formyl transferase, C-terminal domain 206 305 6.1E-22 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 Gene3D G3DSA:3.10.25.10 210 314 1.8E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 309 1.9E-87 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 308 36.094 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 PANTHER PTHR11138 3 320 9.0E-111 T 22-04-2016 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 Pfam PF00551 Formyl transferase 5 183 3.0E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 Gene3D G3DSA:3.40.50.170 3 207 2.4E-77 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS12195 1b09be82471035111eaed2d4fb8d9010 322 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PANTHER PTHR24423:SF439 25 363 1.1E-76 T 22-04-2016 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 207 4.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 SUPERFAMILY SSF55874 198 364 3.14E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 SMART SM00387 251 362 1.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 SMART SM00388 142 207 6.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 SUPERFAMILY SSF55785 7 107 3.24E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 SUPERFAMILY SSF47384 129 207 3.14E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Gene3D G3DSA:1.10.287.130 141 203 5.2E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PANTHER PTHR24423 25 363 1.1E-76 T 22-04-2016 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 361 2.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Pfam PF08448 PAS fold 20 108 7.3E-7 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Gene3D G3DSA:3.30.565.10 210 366 6.9E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 Gene3D G3DSA:3.30.450.20 8 84 4.4E-8 T 22-04-2016 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 315 9.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 9.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 9.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02245 397939a251dcba5da153e8d8b5d9703a 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 9.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PANTHER PTHR33516 1 74 3.8E-66 T 22-04-2016 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PANTHER PTHR33516 102 232 3.8E-66 T 22-04-2016 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 SUPERFAMILY SSF51306 108 230 9.24E-30 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 SUPERFAMILY SSF46785 2 68 1.8E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 Pfam PF00717 Peptidase S24-like 148 211 3.5E-10 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 Gene3D G3DSA:1.10.10.10 2 68 2.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 Hamap MF_00015 LexA repressor [lexA]. 1 232 32.435 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 Pfam PF01726 LexA DNA binding domain 2 63 1.0E-13 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 TIGRFAM TIGR00498 lexA: repressor LexA 2 231 1.4E-49 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 185 197 9.44E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 167 9.44E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 155 9.44E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PANTHER PTHR33516:SF2 1 74 3.8E-66 T 22-04-2016 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 PANTHER PTHR33516:SF2 102 232 3.8E-66 T 22-04-2016 AMK58_RS06375 69d84b1ece4aab486cae7d2d71a81c9a 232 Gene3D G3DSA:2.10.109.10 109 232 8.1E-37 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PANTHER PTHR11961 71 179 6.3E-34 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 SUPERFAMILY SSF46626 70 173 1.72E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 Pfam PF00034 Cytochrome c 73 170 3.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 161 169 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 144 154 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 111 121 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 95 110 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 82 89 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PRINTS PR00604 Class IA and IB cytochrome C signature 125 141 2.96E-18 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 Gene3D G3DSA:1.10.760.10 70 172 5.2E-38 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11905 66f0525eb89f767ce07cd903e819310e 179 PANTHER PTHR11961:SF6 71 179 6.3E-34 T 22-04-2016 AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 Pfam PF00462 Glutaredoxin 4 62 7.8E-24 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 PRINTS PR00160 Glutaredoxin signature 61 74 1.7E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 PRINTS PR00160 Glutaredoxin signature 4 22 1.7E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 PRINTS PR00160 Glutaredoxin signature 47 60 1.7E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 Gene3D G3DSA:3.40.30.10 1 80 1.3E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 PANTHER PTHR10168 4 83 5.4E-29 T 22-04-2016 AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 SUPERFAMILY SSF52833 1 84 6.36E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12830 bf7265b18c0988d463f36f7ae487e2b5 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.2E-33 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 567 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 509 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 SUPERFAMILY SSF47384 329 412 8.83E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 568 5.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 Gene3D G3DSA:1.10.287.130 336 397 9.9E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 Pfam PF00512 His Kinase A (phospho-acceptor) domain 343 411 9.6E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 PANTHER PTHR24423 322 574 1.1E-84 T 22-04-2016 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 SMART SM00387 457 570 1.1E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 SUPERFAMILY SSF55874 400 568 2.23E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 SMART SM00388 343 411 7.5E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08730 e06cceac4bfc6d3648dcbc9511f76d2e 587 Gene3D G3DSA:3.30.565.10 398 568 2.2E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS28935 04e1c991e1d14a30b5607468fb067b4b 309 PANTHER PTHR30290 68 278 1.0E-25 T 22-04-2016 AMK58_RS28935 04e1c991e1d14a30b5607468fb067b4b 309 PANTHER PTHR30290:SF18 68 278 1.0E-25 T 22-04-2016 AMK58_RS28935 04e1c991e1d14a30b5607468fb067b4b 309 Gene3D G3DSA:3.90.76.10 142 276 1.1E-21 T 22-04-2016 AMK58_RS28935 04e1c991e1d14a30b5607468fb067b4b 309 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 167 263 3.5E-19 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS28935 04e1c991e1d14a30b5607468fb067b4b 309 SUPERFAMILY SSF53850 144 276 1.03E-25 T 22-04-2016 AMK58_RS05850 d313907447c19315899bdbff7f95d3aa 133 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 2.2E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK58_RS05850 d313907447c19315899bdbff7f95d3aa 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 18.602 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK58_RS05850 d313907447c19315899bdbff7f95d3aa 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 121 1.0E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK58_RS05850 d313907447c19315899bdbff7f95d3aa 133 PANTHER PTHR28259 7 131 2.4E-31 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Gene3D G3DSA:3.40.50.980 229 389 2.1E-49 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 556 1.3E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 PANTHER PTHR24096:SF208 24 186 6.3E-167 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 PANTHER PTHR24096:SF208 205 567 6.3E-167 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Gene3D G3DSA:3.30.300.30 467 564 2.0E-28 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Gene3D G3DSA:3.40.50.980 39 228 2.3E-35 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 PANTHER PTHR24096 24 186 6.3E-167 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 PANTHER PTHR24096 205 567 6.3E-167 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 SUPERFAMILY SSF56801 22 565 1.18E-151 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Gene3D G3DSA:2.30.38.10 390 462 1.1E-22 T 22-04-2016 AMK58_RS08155 68aac981257a129bf04d93527bcd7940 572 Pfam PF00501 AMP-binding enzyme 43 472 9.9E-105 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS04920 99f9ce612f419d0d33e4acf3e6e84136 221 PANTHER PTHR14021 31 199 7.8E-19 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 AMK58_RS04920 99f9ce612f419d0d33e4acf3e6e84136 221 PANTHER PTHR14021:SF15 31 199 7.8E-19 T 22-04-2016 AMK58_RS04920 99f9ce612f419d0d33e4acf3e6e84136 221 Gene3D G3DSA:1.10.287.110 30 128 3.2E-19 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS04920 99f9ce612f419d0d33e4acf3e6e84136 221 SUPERFAMILY SSF46565 58 129 2.84E-10 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Pfam PF00571 CBS domain 225 272 2.5E-5 T 22-04-2016 IPR000644 CBS domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 SUPERFAMILY SSF54631 150 273 1.26E-20 T 22-04-2016 AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 SMART SM00100 15 130 0.0014 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Pfam PF00027 Cyclic nucleotide-binding domain 36 114 5.1E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Pfam PF03445 Putative nucleotidyltransferase DUF294 299 427 1.6E-39 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Gene3D G3DSA:3.10.580.10 147 268 2.9E-19 T 22-04-2016 AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 PANTHER PTHR11911 149 291 3.6E-17 T 22-04-2016 AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 SUPERFAMILY SSF51206 13 134 1.7E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Gene3D G3DSA:2.60.120.10 13 136 2.8E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 SMART SM00116 225 272 0.002 T 22-04-2016 IPR000644 CBS domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 SMART SM00116 157 208 0.97 T 22-04-2016 IPR000644 CBS domain AMK58_RS12795 feca9aef8881f25f0e65e14e74179237 609 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 464 605 3.3E-42 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 SUPERFAMILY SSF48452 163 360 3.54E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 Gene3D G3DSA:1.25.40.10 119 384 4.5E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 SUPERFAMILY SSF48452 87 203 5.69E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 PIRSF PIRSF031802 1 464 2.1E-136 T 22-04-2016 IPR016982 Uncharacterised conserved protein UCP031802 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 PANTHER PTHR23083 90 292 1.2E-12 T 22-04-2016 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 PANTHER PTHR23083 325 397 1.2E-12 T 22-04-2016 AMK58_RS02010 8e66ea995c61cf567c9bb00a526dc4ef 469 Pfam PF07219 HemY protein N-terminus 26 132 3.8E-28 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 SUPERFAMILY SSF111352 39 419 9.81E-135 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 Gene3D G3DSA:1.10.3430.10 37 419 1.0E-147 T 22-04-2016 IPR029020 Ammonium/urea transporter AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 Pfam PF00909 Ammonium Transporter Family 45 436 1.9E-124 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 PANTHER PTHR11730:SF17 15 436 8.7E-194 T 22-04-2016 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 TIGRFAM TIGR00836 amt: ammonium transporter 43 436 3.2E-141 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 PANTHER PTHR11730 15 436 8.7E-194 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMK58_RS01320 b34d1aaa73a3497bdfc54b079f6d6fff 438 ProSitePatterns PS01219 Ammonium transporters signature. 195 220 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 Gene3D G3DSA:3.40.50.300 83 183 3.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 Pfam PF00005 ABC transporter 108 168 4.6E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 Gene3D G3DSA:3.40.50.300 1 60 5.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 SUPERFAMILY SSF52540 1 55 7.96E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 SUPERFAMILY SSF52540 73 185 1.77E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 PANTHER PTHR24220 1 220 5.3E-81 T 22-04-2016 AMK58_RS19305 3ff2b798a6ad2e3103cbbf8d45e6d4e2 233 PANTHER PTHR24220:SF239 1 220 5.3E-81 T 22-04-2016 AMK58_RS10900 624671550532508a7fe5e3cd54bf9ba5 397 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 27 393 7.1E-155 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition AMK58_RS10900 624671550532508a7fe5e3cd54bf9ba5 397 PANTHER PTHR31384:SF34 55 331 2.7E-70 T 22-04-2016 AMK58_RS10900 624671550532508a7fe5e3cd54bf9ba5 397 PANTHER PTHR31384 55 331 2.7E-70 T 22-04-2016 AMK58_RS10900 624671550532508a7fe5e3cd54bf9ba5 397 SUPERFAMILY SSF55729 196 370 4.5E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS10900 624671550532508a7fe5e3cd54bf9ba5 397 Gene3D G3DSA:3.40.630.30 196 342 1.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 Gene3D G3DSA:3.40.630.10 402 464 6.8E-58 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 Gene3D G3DSA:3.40.630.10 19 217 6.8E-58 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 Gene3D G3DSA:3.30.70.360 218 370 2.7E-60 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 Pfam PF01546 Peptidase family M20/M25/M40 90 461 5.7E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 Pfam PF07687 Peptidase dimerisation domain 206 364 4.1E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 PANTHER PTHR11014 1 276 8.7E-154 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 PANTHER PTHR11014 294 466 8.7E-154 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 SUPERFAMILY SSF53187 9 207 1.61E-61 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 SUPERFAMILY SSF53187 378 464 1.61E-61 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 PANTHER PTHR11014:SF72 1 276 8.7E-154 T 22-04-2016 AMK58_RS10590 5e78c73db70d38aa8ebf5f9c477cb33c 466 PANTHER PTHR11014:SF72 294 466 8.7E-154 T 22-04-2016 AMK58_RS13865 df5b0cd842d17add50cc16e651a35bb9 60 SUPERFAMILY SSF47598 2 48 1.33E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK58_RS00050 df5b0cd842d17add50cc16e651a35bb9 60 SUPERFAMILY SSF47598 2 48 1.33E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK58_RS02735 d1a184dfa3d7e3093870db977d73edaf 101 Pfam PF13560 Helix-turn-helix domain 3 48 6.0E-8 T 22-04-2016 AMK58_RS02735 d1a184dfa3d7e3093870db977d73edaf 101 SMART SM00530 1 50 0.0021 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS02735 d1a184dfa3d7e3093870db977d73edaf 101 Gene3D G3DSA:1.10.260.40 3 91 1.4E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02735 d1a184dfa3d7e3093870db977d73edaf 101 SUPERFAMILY SSF47413 2 56 6.76E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS17705 03b6b417682a791ca89c4fd92d311411 180 SUPERFAMILY SSF52440 107 180 3.55E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS17705 03b6b417682a791ca89c4fd92d311411 180 Pfam PF01820 D-ala D-ala ligase N-terminus 110 180 1.1E-16 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS17705 03b6b417682a791ca89c4fd92d311411 180 Gene3D G3DSA:3.40.50.20 107 180 1.1E-22 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 24 226 40.039 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 27 219 1.8E-71 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 SUPERFAMILY SSF55821 20 222 4.81E-79 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 31 219 1.8E-77 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 Gene3D G3DSA:3.90.870.10 27 222 2.8E-85 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 PANTHER PTHR21327:SF15 5 219 1.1E-124 T 22-04-2016 AMK58_RS11285 c1dfa218157132003cdbbf76d5e24192 228 PANTHER PTHR21327 5 219 1.1E-124 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 Gene3D G3DSA:2.60.40.420 117 262 2.7E-62 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 SUPERFAMILY SSF81464 27 121 3.43E-30 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PANTHER PTHR22888 29 286 6.7E-122 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 115 3.3E-24 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 40 256 4.4E-61 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 Gene3D G3DSA:1.10.287.90 29 116 1.7E-31 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 SUPERFAMILY SSF49503 123 260 3.02E-59 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 127 246 6.2E-59 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 123 142 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 121 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 5.0E-57 T 22-04-2016 AMK58_RS09540 248429f6219b6829545bb77ce744c9ee 286 PRINTS PR01166 Cytochrome c oxidase subunit II signature 89 101 5.0E-57 T 22-04-2016 AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 PANTHER PTHR10264 23 143 4.4E-112 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 PANTHER PTHR10264 160 373 4.4E-112 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 SUPERFAMILY SSF117892 153 273 8.63E-20 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 PANTHER PTHR10264:SF51 23 143 4.4E-112 T 22-04-2016 IPR010201 HflK GO:0016021 AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 PANTHER PTHR10264:SF51 160 373 4.4E-112 T 22-04-2016 IPR010201 HflK GO:0016021 AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 SMART SM00244 88 266 2.0E-21 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 Pfam PF01145 SPFH domain / Band 7 family 92 281 7.1E-26 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05480 613e4b878efb0186d7177713650b5cf6 387 TIGRFAM TIGR01933 hflK: HflK protein 90 361 1.2E-85 T 22-04-2016 IPR010201 HflK GO:0016021 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 10 260 3.9E-129 T 22-04-2016 IPR022403 Alcohol ABC transporter, permease protein AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 Pfam PF01061 ABC-2 type transporter 13 229 1.5E-30 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PANTHER PTHR30294 14 269 1.3E-82 T 22-04-2016 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 3.8E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 29 50 3.8E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 3.8E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PANTHER PTHR30294:SF13 14 269 1.3E-82 T 22-04-2016 AMK58_RS03475 4450cad33e7ec4de53827f0de15aa8cd 269 PIRSF PIRSF006648 2 259 4.8E-35 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 PANTHER PTHR10799:SF750 49 317 2.0E-30 T 22-04-2016 AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 Gene3D G3DSA:3.30.450.20 30 146 1.8E-12 T 22-04-2016 AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 319 3.6E-55 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 SUPERFAMILY SSF55073 164 320 8.63E-53 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 Gene3D G3DSA:3.30.70.270 161 321 1.7E-58 T 22-04-2016 AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 Pfam PF13426 PAS domain 47 147 7.8E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 SMART SM00267 148 320 1.9E-69 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 SUPERFAMILY SSF55785 51 157 2.26E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 SMART SM00091 36 101 2.4E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 PANTHER PTHR10799 49 317 2.0E-30 T 22-04-2016 AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 41 155 7.3E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS00200 e59a8023ea17a50efb377b8f68d54c3e 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 316 3.7E-49 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS00630 57d43d7c3cde6d9a8ab915826aa17d67 305 PANTHER PTHR30269 10 295 2.7E-75 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS00630 57d43d7c3cde6d9a8ab915826aa17d67 305 Pfam PF01925 Sulfite exporter TauE/SafE 18 286 3.6E-47 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS00630 57d43d7c3cde6d9a8ab915826aa17d67 305 PANTHER PTHR30269:SF15 10 295 2.7E-75 T 22-04-2016 AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 Gene3D G3DSA:2.60.120.10 12 148 3.1E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 Gene3D G3DSA:1.10.10.10 152 229 1.5E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 SUPERFAMILY SSF46785 152 229 5.71E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 PANTHER PTHR24567 9 232 2.5E-35 T 22-04-2016 AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 PANTHER PTHR24567:SF30 9 232 2.5E-35 T 22-04-2016 AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 Pfam PF13545 Crp-like helix-turn-helix domain 155 227 6.9E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 SUPERFAMILY SSF51206 10 148 3.27E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 SMART SM00100 15 137 7.2E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 SMART SM00419 175 220 8.1E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08465 7841f5c78a509b6950a1b9be337c90c9 235 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 1.2E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 Gene3D G3DSA:3.30.1780.10 1 135 1.1E-44 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 PIRSF PIRSF001439 3 317 1.2E-78 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 SUPERFAMILY SSF51735 1 312 4.07E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 PANTHER PTHR13812 1 315 1.4E-100 T 22-04-2016 AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 PANTHER PTHR13812:SF19 1 315 1.4E-100 T 22-04-2016 AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 16 311 5.3E-73 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK58_RS12625 d2b018580ff5207af338fb7916619457 318 Gene3D G3DSA:3.40.50.720 136 295 4.7E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 PANTHER PTHR30341 16 401 7.4E-159 T 22-04-2016 AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 16 393 23.285 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 19 386 9.0E-137 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 Gene3D G3DSA:1.20.1530.10 16 392 3.0E-144 T 22-04-2016 IPR023171 Na/H antiporter domain AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 Pfam PF06965 Na+/H+ antiporter 1 18 387 8.4E-140 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK58_RS03300 bf21e90748b9706a6e40545461cfecd1 408 PANTHER PTHR30341:SF0 16 401 7.4E-159 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 SUPERFAMILY SSF53155 13 80 1.61E-14 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 6.2E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 Gene3D G3DSA:1.10.10.10 74 155 1.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 SUPERFAMILY SSF46767 74 155 8.37E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 PANTHER PTHR10815 14 154 3.1E-47 T 22-04-2016 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 10 157 37.407 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 123 129 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 9.2E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK58_RS00390 32a1e59d08ae6b14a192188951c135bd 173 PANTHER PTHR10815:SF5 14 154 3.1E-47 T 22-04-2016 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 Gene3D G3DSA:3.50.50.60 174 253 2.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 Gene3D G3DSA:3.50.50.60 20 120 2.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 Gene3D G3DSA:3.50.50.60 346 393 2.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 PANTHER PTHR13847 1 424 5.2E-162 T 22-04-2016 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 SUPERFAMILY SSF51971 326 391 1.14E-43 T 22-04-2016 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 SUPERFAMILY SSF51971 29 265 1.14E-43 T 22-04-2016 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 Pfam PF01266 FAD dependent oxidoreductase 31 382 1.8E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK58_RS07865 6a894f9e484bdbdaf9769d90870d6f60 426 PANTHER PTHR13847:SF210 1 424 5.2E-162 T 22-04-2016 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 Pfam PF03309 Type III pantothenate kinase 2 207 3.9E-70 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 SUPERFAMILY SSF53067 1 122 8.27E-32 T 22-04-2016 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 Gene3D G3DSA:3.30.420.40 96 255 2.9E-51 T 22-04-2016 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 248 1.6E-69 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 PANTHER PTHR34265 1 254 3.3E-75 T 22-04-2016 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 SUPERFAMILY SSF53067 125 254 2.05E-40 T 22-04-2016 AMK58_RS06195 78dfcff1dbf79cfc49342d5b753ae30c 257 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 35.423 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 12 520 30.075 T 22-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 SUPERFAMILY SSF48163 329 519 5.75E-40 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Pfam PF01921 tRNA synthetases class I (K) 12 365 3.8E-134 T 22-04-2016 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Gene3D G3DSA:3.40.50.620 277 319 5.9E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Gene3D G3DSA:1.10.10.350 426 519 1.4E-32 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 SUPERFAMILY SSF52374 13 330 2.53E-58 T 22-04-2016 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 PANTHER PTHR37940 3 522 8.0E-146 T 22-04-2016 AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Gene3D G3DSA:3.40.50.620 13 194 6.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS02590 06baf79fa68c726892bad320c4c3b86b 522 Gene3D G3DSA:3.40.50.620 231 276 6.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 SUPERFAMILY SSF50249 403 522 3.6E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Gene3D G3DSA:2.40.50.140 403 523 8.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 PANTHER PTHR10459:SF10 205 522 2.4E-60 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Pfam PF04675 DNA ligase N terminus 18 158 6.5E-6 T 22-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Gene3D G3DSA:3.30.1490.70 355 399 7.4E-17 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Gene3D G3DSA:3.30.1490.70 201 230 7.4E-17 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 226 234 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 PANTHER PTHR10459 205 522 2.4E-60 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 SUPERFAMILY SSF56091 203 398 1.38E-51 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 523 2.6E-245 T 22-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Gene3D G3DSA:3.30.470.30 231 343 4.8E-25 T 22-04-2016 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Pfam PF04679 ATP dependent DNA ligase C terminal region 419 508 2.2E-13 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK58_RS08390 5478e3751c7ced6d441dd0f6e108c58d 525 Pfam PF01068 ATP dependent DNA ligase domain 205 398 1.9E-28 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 PANTHER PTHR24095:SF178 12 645 0.0 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 640 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Gene3D G3DSA:3.30.300.30 515 634 2.9E-28 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 1.1E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 PANTHER PTHR24095 12 645 0.0 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 7.2E-22 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 54.348 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Gene3D G3DSA:2.30.38.10 436 512 1.0E-9 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 SUPERFAMILY SSF56801 13 638 1.44E-188 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Pfam PF00501 AMP-binding enzyme 82 519 8.2E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Gene3D G3DSA:3.40.50.980 79 263 2.8E-44 T 22-04-2016 AMK58_RS02065 56ff9aa89a8e1b4e1d67b7058170044b 646 Gene3D G3DSA:3.40.50.980 264 422 1.9E-27 T 22-04-2016 AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 Pfam PF13466 STAS domain 14 93 2.5E-15 T 22-04-2016 IPR002645 STAS domain AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 PANTHER PTHR33495 1 101 1.1E-13 T 22-04-2016 AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 PANTHER PTHR33495:SF3 1 101 1.1E-13 T 22-04-2016 AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 Gene3D G3DSA:3.30.750.24 2 101 8.7E-22 T 22-04-2016 IPR002645 STAS domain AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 101 6.6E-18 T 22-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMK58_RS02370 a405faaaae914b7654359420026e69b8 101 SUPERFAMILY SSF52091 1 99 1.67E-21 T 22-04-2016 IPR002645 STAS domain AMK58_RS04620 f8c1b5e4fc8be7829bc88e07750114ef 154 PIRSF PIRSF005788 1 154 4.9E-68 T 22-04-2016 IPR004952 Uncharacterised protein family UPF0460 AMK58_RS04620 f8c1b5e4fc8be7829bc88e07750114ef 154 Pfam PF03270 Protein of unknown function, DUF269 33 152 8.1E-54 T 22-04-2016 IPR004952 Uncharacterised protein family UPF0460 AMK58_RS04620 f8c1b5e4fc8be7829bc88e07750114ef 154 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 14 152 1.8E-65 T 22-04-2016 IPR004952 Uncharacterised protein family UPF0460 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 SUPERFAMILY SSF53732 3 466 4.05E-168 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PANTHER PTHR11670:SF38 1 309 0.0 T 22-04-2016 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PANTHER PTHR11670:SF38 329 467 0.0 T 22-04-2016 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 60.629 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Gene3D G3DSA:3.30.499.10 3 160 1.8E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Gene3D G3DSA:3.40.1060.10 169 282 2.2E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Gene3D G3DSA:3.30.499.10 337 466 4.3E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Gene3D G3DSA:3.30.499.10 295 305 4.3E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 466 5.1E-247 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.9E-157 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 84 97 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 288 302 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 121 134 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 197 210 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 110 118 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 135 150 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 211 224 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 345 356 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PRINTS PR00415 Aconitase family signature 401 414 8.3E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PANTHER PTHR11670 1 309 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12225 fde9ff9e7576da5cc0ecf589437399da 467 PANTHER PTHR11670 329 467 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 PIRSF PIRSF004555 1 107 2.5E-38 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 SUPERFAMILY SSF82607 8 101 2.49E-32 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 Gene3D G3DSA:3.30.1310.10 1 107 6.8E-42 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 PANTHER PTHR33449:SF1 1 107 2.4E-39 T 22-04-2016 AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 22.105 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 PANTHER PTHR33449 1 107 2.4E-39 T 22-04-2016 AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 9.3E-33 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS11890 1e68dd7c02180d725e409989dd4332cb 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 3.1E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 SUPERFAMILY SSF47188 1 130 1.83E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 Pfam PF01814 Hemerythrin HHE cation binding domain 17 129 1.9E-11 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 130 8.0E-32 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 PANTHER PTHR37164 2 136 3.4E-19 T 22-04-2016 AMK58_RS07125 5c025c2926982cc8ce407e7e77db5149 136 Gene3D G3DSA:1.20.120.50 2 131 7.9E-34 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 Gene3D G3DSA:3.40.50.720 1 162 2.3E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 PANTHER PTHR20836:SF0 1 265 6.8E-81 T 22-04-2016 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 PIRSF PIRSF000161 1 265 9.1E-80 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 5.0E-33 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 PANTHER PTHR20836 1 265 6.8E-81 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 32.104 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 3.4E-41 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 7.6E-80 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 SUPERFAMILY SSF51735 1 125 1.19E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 SUPERFAMILY SSF51735 235 265 1.19E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS00595 44d4a5e6b67c09a554db22debf778ad3 265 SUPERFAMILY SSF55347 126 235 3.92E-33 T 22-04-2016 AMK58_RS21405 193c28dd17b7240a840f81d12293541f 118 SUPERFAMILY SSF161098 3 108 4.19E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS21405 193c28dd17b7240a840f81d12293541f 118 PANTHER PTHR30222:SF6 1 118 1.3E-33 T 22-04-2016 AMK58_RS21405 193c28dd17b7240a840f81d12293541f 118 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 5 112 1.9E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS21405 193c28dd17b7240a840f81d12293541f 118 PANTHER PTHR30222 1 118 1.3E-33 T 22-04-2016 AMK58_RS21405 193c28dd17b7240a840f81d12293541f 118 Gene3D G3DSA:1.10.3720.10 3 112 8.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 PANTHER PTHR21235:SF1 4 212 1.1E-81 T 22-04-2016 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 Gene3D G3DSA:3.40.50.880 2 212 3.8E-74 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 SUPERFAMILY SSF52317 3 203 2.52E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 PIRSF PIRSF000495 2 214 7.8E-69 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 Pfam PF00117 Glutamine amidotransferase class-I 15 209 2.5E-21 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 212 35.999 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 PANTHER PTHR21235 4 212 1.1E-81 T 22-04-2016 AMK58_RS00505 06868d5cda410ca77888bda16cf87ca8 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 211 5.2E-67 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 Pfam PF00875 DNA photolyase 9 168 3.3E-52 T 22-04-2016 IPR006050 DNA photolyase, N-terminal AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PANTHER PTHR11455 4 482 1.4E-217 T 22-04-2016 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 Pfam PF03441 FAD binding domain of DNA photolyase 279 478 4.3E-86 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PRINTS PR00147 DNA photolyase signature 144 160 4.4E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PRINTS PR00147 DNA photolyase signature 328 344 4.4E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PRINTS PR00147 DNA photolyase signature 387 401 4.4E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PRINTS PR00147 DNA photolyase signature 348 366 4.4E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 PANTHER PTHR11455:SF18 4 482 1.4E-217 T 22-04-2016 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 SUPERFAMILY SSF48173 196 482 1.7E-115 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 Gene3D G3DSA:1.10.579.10 287 481 6.1E-82 T 22-04-2016 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 328 340 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 Gene3D G3DSA:1.25.40.80 207 286 3.9E-40 T 22-04-2016 AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 Gene3D G3DSA:3.40.50.620 3 166 4.8E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS09050 b60915f37789ba56d9feb669c8803ffd 485 SUPERFAMILY SSF52425 7 211 4.84E-60 T 22-04-2016 IPR006050 DNA photolyase, N-terminal AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PANTHER PTHR11469 1 547 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Gene3D G3DSA:1.10.1390.10 505 547 5.6E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Gene3D G3DSA:3.40.50.10490 96 288 4.4E-89 T 22-04-2016 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 SUPERFAMILY SSF53697 4 546 4.73E-232 T 22-04-2016 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 3.6E-58 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Gene3D G3DSA:3.40.50.10490 7 95 2.5E-149 T 22-04-2016 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Gene3D G3DSA:3.40.50.10490 291 504 2.5E-149 T 22-04-2016 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 42.628 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 PANTHER PTHR11469:SF4 1 547 0.0 T 22-04-2016 AMK58_RS11005 dc2d809d4194bf1017ef07c8ddc37916 547 Pfam PF00342 Phosphoglucose isomerase 49 540 7.6E-240 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF81665 2 113 2.09E-123 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF81665 676 889 2.09E-123 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF81665 223 317 2.09E-123 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Gene3D G3DSA:3.40.1110.10 313 534 8.9E-57 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF56784 321 341 2.07E-58 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF56784 482 730 2.07E-58 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SMART SM00831 2 75 2.2E-34 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 325 331 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 559 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 662 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 538 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 3.4E-38 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Pfam PF00122 E1-E2 ATPase 80 314 8.1E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 69 1.6E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 640 9.2E-20 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Gene3D G3DSA:2.70.150.10 18 54 6.2E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Gene3D G3DSA:2.70.150.10 108 221 6.2E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PANTHER PTHR24093 2 890 0.0 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF81653 112 220 1.7E-29 T 22-04-2016 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 592 716 4.2E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 81 343 3.2E-39 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 SUPERFAMILY SSF81660 330 531 5.89E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 598 614 6.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 6.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 658 683 6.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 485 503 6.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Gene3D G3DSA:1.20.1110.10 55 107 8.8E-109 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Gene3D G3DSA:1.20.1110.10 595 886 8.8E-109 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain AMK58_RS00445 f4cf3eb38dc2165d6af30487018f41f9 892 Pfam PF00689 Cation transporting ATPase, C-terminus 711 882 1.2E-41 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00086 70 111 0.62 T 22-04-2016 IPR001610 PAC motif AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00086 195 237 0.0015 T 22-04-2016 IPR001610 PAC motif AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00086 324 364 24.0 T 22-04-2016 IPR001610 PAC motif AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 PANTHER PTHR24423 100 609 1.2E-129 T 22-04-2016 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SUPERFAMILY SSF55785 6 119 6.42E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SUPERFAMILY SSF55785 260 371 7.15E-18 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00388 384 453 4.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Gene3D G3DSA:1.10.287.130 376 448 2.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 453 6.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Gene3D G3DSA:3.30.565.10 456 610 1.9E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 118 1.7E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 119 243 1.4E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 248 370 1.2E-16 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SUPERFAMILY SSF47384 371 454 3.92E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Gene3D G3DSA:3.30.450.20 123 235 7.4E-32 T 22-04-2016 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Gene3D G3DSA:3.30.450.20 244 362 9.7E-19 T 22-04-2016 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SUPERFAMILY SSF55874 442 609 5.5E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Pfam PF08448 PAS fold 5 112 9.3E-9 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Pfam PF08448 PAS fold 131 237 1.6E-16 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Gene3D G3DSA:3.30.450.20 5 122 4.2E-24 T 22-04-2016 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00091 123 189 1.7E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00091 249 314 0.3 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00091 1 61 0.028 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SUPERFAMILY SSF55785 108 235 4.03E-30 T 22-04-2016 IPR000014 PAS domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Pfam PF00989 PAS fold 251 361 1.2E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 610 6.3E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 9.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 9.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 590 9.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10265 db4c389b2793fc9a8883b6da2788fb87 617 SMART SM00387 499 612 4.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 PANTHER PTHR33175 6 102 1.5E-45 T 22-04-2016 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 PANTHER PTHR33175:SF2 6 102 1.5E-45 T 22-04-2016 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 2.0E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 2.0E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 2.0E-12 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 97 9.3E-42 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 Pfam PF00216 Bacterial DNA-binding protein 6 95 7.1E-26 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 Gene3D G3DSA:4.10.520.10 5 96 8.2E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 SUPERFAMILY SSF47729 6 96 2.21E-26 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 100 28.258 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMK58_RS08255 d916c75ffb93ba0140bce4b1deac83f4 112 SMART SM00411 6 95 9.8E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 SMART SM00382 25 196 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 SUPERFAMILY SSF52540 9 202 6.95E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 Pfam PF00005 ABC transporter 17 146 1.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 PANTHER PTHR24220 2 220 1.9E-67 T 22-04-2016 AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 ProSitePatterns PS00211 ABC transporters family signature. 119 133 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 PANTHER PTHR24220:SF589 2 220 1.9E-67 T 22-04-2016 AMK58_RS03530 0879888436d367a93af9c04261e03bc1 236 Gene3D G3DSA:3.40.50.300 7 195 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10715 2fbf43478dbb8c850795bcbcfdbf9ad5 479 PANTHER PTHR13285 1 447 2.4E-104 T 22-04-2016 AMK58_RS10715 2fbf43478dbb8c850795bcbcfdbf9ad5 479 PANTHER PTHR13285:SF24 1 447 2.4E-104 T 22-04-2016 AMK58_RS10715 2fbf43478dbb8c850795bcbcfdbf9ad5 479 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 151 354 1.5E-24 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT AMK58_RS10715 2fbf43478dbb8c850795bcbcfdbf9ad5 479 PIRSF PIRSF500217 1 479 4.2E-134 T 22-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 AMK58_RS10715 2fbf43478dbb8c850795bcbcfdbf9ad5 479 PIRSF PIRSF016636 1 479 4.5E-132 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 16 293 8.6E-65 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 SUPERFAMILY SSF52540 17 158 2.36E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 PANTHER PTHR11088 1 296 1.5E-73 T 22-04-2016 AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 Gene3D G3DSA:1.10.287.890 211 292 1.7E-27 T 22-04-2016 AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 16 303 25.391 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 PANTHER PTHR11088:SF25 1 296 1.5E-73 T 22-04-2016 AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 Gene3D G3DSA:3.40.50.300 14 181 2.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05510 636104ba268018cf3a57cbb26961a836 330 Pfam PF01715 IPP transferase 49 292 2.1E-59 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 PANTHER PTHR31350 67 275 8.1E-19 T 22-04-2016 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 SUPERFAMILY SSF48452 202 274 9.11E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 Pfam PF13371 Tetratricopeptide repeat 198 269 7.8E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 Pfam PF13369 Transglutaminase-like superfamily 43 195 1.1E-39 T 22-04-2016 IPR032698 Protein SirB1, N-terminal AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 PANTHER PTHR31350:SF1 67 275 8.1E-19 T 22-04-2016 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 Gene3D G3DSA:1.25.40.10 21 58 1.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13830 749506beff9c5b1484d825a3e661177a 277 Gene3D G3DSA:1.25.40.10 194 256 1.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 1.2E-121 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.6E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.6E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.6E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.6E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 Pfam PF09190 DALR domain 341 397 4.5E-16 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 457 38.53 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 Gene3D G3DSA:3.40.50.620 19 306 5.9E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 456 3.5E-157 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 SMART SM00840 338 397 2.7E-19 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 Gene3D G3DSA:1.20.120.640 308 389 6.4E-13 T 22-04-2016 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 PANTHER PTHR10890 3 457 5.7E-220 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 SUPERFAMILY SSF52374 4 312 2.55E-93 T 22-04-2016 AMK58_RS11550 48f03a2f77362db8471540833eca001d 457 SUPERFAMILY SSF47323 317 456 1.31E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 PANTHER PTHR11895 8 481 2.5E-132 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 PANTHER PTHR11895:SF76 8 481 2.5E-132 T 22-04-2016 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 SUPERFAMILY SSF75304 8 481 1.01E-127 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 Pfam PF01425 Amidase 33 463 2.0E-104 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 ProSitePatterns PS00571 Amidases signature. 159 190 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK58_RS03180 1d4d5fac64640bf754cc4f702109bb24 503 Gene3D G3DSA:3.90.1300.10 8 483 2.5E-131 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 PANTHER PTHR22572:SF117 106 320 4.6E-57 T 22-04-2016 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Gene3D G3DSA:2.160.10.10 117 233 6.1E-24 T 22-04-2016 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 PANTHER PTHR22572 106 320 4.6E-57 T 22-04-2016 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 292 320 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 114 142 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 120 148 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 15 350 30.696 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 188 1.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 151 1.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 248 282 4.9E-8 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 317 2.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Gene3D G3DSA:2.160.10.10 234 333 3.8E-26 T 22-04-2016 AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 211 241 0.012 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12330 f1c86db4b167e7c3391a81478053f32e 375 SUPERFAMILY SSF51161 63 339 7.21E-71 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS09465 c45f672a4dc507229281363e55e88dbb 160 Pfam PF08534 Redoxin 4 157 4.5E-38 T 22-04-2016 IPR013740 Redoxin GO:0016491 AMK58_RS09465 c45f672a4dc507229281363e55e88dbb 160 SUPERFAMILY SSF52833 1 160 2.72E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS09465 c45f672a4dc507229281363e55e88dbb 160 PANTHER PTHR10430 1 160 1.4E-78 T 22-04-2016 AMK58_RS09465 c45f672a4dc507229281363e55e88dbb 160 Gene3D G3DSA:3.40.30.10 1 160 1.1E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS05370 08e63ce260744a077585656861c7b097 733 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 18 732 0.0 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 SUPERFAMILY SSF56322 24 512 7.33E-118 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 Gene3D G3DSA:3.40.50.880 534 711 5.4E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 696 709 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 579 588 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 606 617 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 535 549 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 651 663 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00097 Anthranilate synthase component II signature 631 639 6.8E-24 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PIRSF PIRSF036934 6 733 0.0 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 Pfam PF00117 Glutamine amidotransferase class-I 537 711 3.2E-37 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PANTHER PTHR11236:SF22 34 591 2.5E-242 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 Pfam PF00425 chorismate binding enzyme 252 504 4.9E-63 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK58_RS05370 08e63ce260744a077585656861c7b097 733 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 535 719 3.2E-38 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 Gene3D G3DSA:3.60.120.10 34 514 5.0E-115 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 SUPERFAMILY SSF52317 531 720 4.79E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00096 Glutamine amidotransferase superfamily signature 696 709 3.1E-10 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00096 Glutamine amidotransferase superfamily signature 606 617 3.1E-10 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PRINTS PR00096 Glutamine amidotransferase superfamily signature 579 588 3.1E-10 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 PANTHER PTHR11236 34 591 2.5E-242 T 22-04-2016 AMK58_RS05370 08e63ce260744a077585656861c7b097 733 Pfam PF04715 Anthranilate synthase component I, N terminal region 74 204 2.8E-6 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 PANTHER PTHR10108 47 295 7.1E-122 T 22-04-2016 AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 PANTHER PTHR10108 312 393 7.1E-122 T 22-04-2016 AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 Pfam PF02353 Mycolic acid cyclopropane synthetase 111 374 3.0E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 SUPERFAMILY SSF53335 119 379 4.91E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 PIRSF PIRSF003085 1 396 5.0E-137 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 Gene3D G3DSA:3.40.50.150 108 377 1.5E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 PANTHER PTHR10108:SF743 47 295 7.1E-122 T 22-04-2016 AMK58_RS07375 cd06fa941cbb65ed214ea412d2410a39 417 PANTHER PTHR10108:SF743 312 393 7.1E-122 T 22-04-2016 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 306 5.2E-94 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Pfam PF00889 Elongation factor TS 71 289 3.3E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Gene3D G3DSA:3.30.479.20 248 292 1.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Gene3D G3DSA:3.30.479.20 57 93 1.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Gene3D G3DSA:3.30.479.20 187 202 1.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 SUPERFAMILY SSF54713 150 307 1.24E-46 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 SUPERFAMILY SSF54713 56 145 4.36E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Gene3D G3DSA:1.10.8.10 2 55 1.9E-28 T 22-04-2016 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 PANTHER PTHR11741 1 309 1.5E-147 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Gene3D G3DSA:1.10.286.20 205 247 2.1E-20 T 22-04-2016 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 SUPERFAMILY SSF46934 4 55 1.4E-19 T 22-04-2016 IPR009060 UBA-like GO:0005515 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK58_RS06270 8cc7afe1d23d478efbe1732009211277 309 Hamap MF_00050 Elongation factor Ts [tsf]. 1 306 77.498 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK58_RS11665 5f6488a5fed5ee8514539d8b2cd10ca7 105 SUPERFAMILY SSF141091 1 102 6.41E-40 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK58_RS11665 5f6488a5fed5ee8514539d8b2cd10ca7 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.054 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11665 5f6488a5fed5ee8514539d8b2cd10ca7 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.2E-43 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK58_RS11665 5f6488a5fed5ee8514539d8b2cd10ca7 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-35 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11665 5f6488a5fed5ee8514539d8b2cd10ca7 105 PANTHER PTHR21349 1 103 1.9E-48 T 22-04-2016 AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 SUPERFAMILY SSF56601 1 319 8.82E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 Gene3D G3DSA:3.40.710.10 143 319 4.4E-26 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 Gene3D G3DSA:3.40.710.10 1 142 3.8E-43 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 Pfam PF00144 Beta-lactamase 2 142 2.2E-37 T 22-04-2016 IPR001466 Beta-lactamase-related AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 Pfam PF00144 Beta-lactamase 143 304 2.3E-16 T 22-04-2016 IPR001466 Beta-lactamase-related AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 PANTHER PTHR22935 1 306 8.2E-57 T 22-04-2016 AMK58_RS11275 969023e822ca4b7dd071db804be6d005 320 PANTHER PTHR22935:SF77 1 306 8.2E-57 T 22-04-2016 AMK58_RS07750 f07cba64dbebd22bc52c9a833df53685 102 SMART SM00450 2 97 7.4E-22 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07750 f07cba64dbebd22bc52c9a833df53685 102 SUPERFAMILY SSF52821 2 99 3.4E-30 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07750 f07cba64dbebd22bc52c9a833df53685 102 Pfam PF00581 Rhodanese-like domain 4 93 2.6E-12 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07750 f07cba64dbebd22bc52c9a833df53685 102 Gene3D G3DSA:3.40.250.10 2 100 1.7E-28 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS04795 9fc7b1d1338444c2d0006ee717d2e29f 319 SUPERFAMILY SSF55166 50 301 3.3E-86 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS04795 9fc7b1d1338444c2d0006ee717d2e29f 319 PIRSF PIRSF018455 9 308 2.7E-98 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMK58_RS04795 9fc7b1d1338444c2d0006ee717d2e29f 319 Pfam PF03411 Penicillin-insensitive murein endopeptidase 64 299 1.6E-92 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMK58_RS04795 9fc7b1d1338444c2d0006ee717d2e29f 319 Gene3D G3DSA:3.30.1380.10 50 301 9.2E-88 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 SUPERFAMILY SSF51419 19 236 1.61E-56 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 SMART SM01005 244 370 2.7E-53 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 135 147 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 298 315 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 352 365 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 206 233 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 277 292 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 169 180 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 37 53 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PRINTS PR00992 Alanine racemase signature 73 91 1.1E-44 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 Gene3D G3DSA:3.20.20.10 22 226 1.7E-59 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PANTHER PTHR30511:SF0 8 375 1.1E-96 T 22-04-2016 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 SUPERFAMILY SSF50621 239 371 3.0E-41 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 Pfam PF00842 Alanine racemase, C-terminal domain 245 369 9.3E-34 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 Pfam PF01168 Alanine racemase, N-terminal domain 19 233 7.3E-56 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 42 52 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 PANTHER PTHR30511 8 375 1.1E-96 T 22-04-2016 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 TIGRFAM TIGR00492 alr: alanine racemase 15 369 1.7E-74 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 Hamap MF_01201 Alanine racemase. 12 370 28.962 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS07365 96be6ca0f7e574946d44c9c3fdce245f 378 Gene3D G3DSA:2.40.37.10 227 371 7.4E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 PANTHER PTHR36510:SF1 1 372 2.0E-129 T 22-04-2016 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 376 89.54 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 SUPERFAMILY SSF55931 3 370 1.49E-106 T 22-04-2016 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 7 287 4.7E-53 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 PANTHER PTHR36510 1 372 2.0E-129 T 22-04-2016 AMK58_RS10280 14b4c2a07854c522006d1061dcbdd260 376 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 6 291 1.1E-92 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 Pfam PF01029 NusB family 31 170 5.5E-26 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 26 173 18.224 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 SUPERFAMILY SSF48013 28 175 2.22E-27 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 Gene3D G3DSA:1.10.940.10 27 177 7.9E-30 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 PANTHER PTHR11078 28 186 5.3E-23 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK58_RS08305 614086482d4ed32e504c308c541eb1d9 190 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 29 171 1.0E-31 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK58_RS10125 23548372a4997a80c15fee87844f8dfd 238 SUPERFAMILY SSF75708 201 237 2.22E-37 T 22-04-2016 AMK58_RS10125 23548372a4997a80c15fee87844f8dfd 238 SUPERFAMILY SSF75708 56 174 2.22E-37 T 22-04-2016 AMK58_RS10125 23548372a4997a80c15fee87844f8dfd 238 Gene3D G3DSA:1.10.287.500 79 123 6.2E-6 T 22-04-2016 AMK58_RS10125 23548372a4997a80c15fee87844f8dfd 238 Gene3D G3DSA:1.10.287.500 125 170 3.3E-13 T 22-04-2016 AMK58_RS10125 23548372a4997a80c15fee87844f8dfd 238 Pfam PF04344 Chemotaxis phosphatase, CheZ 126 237 2.1E-11 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 PANTHER PTHR11364 7 278 7.2E-54 T 22-04-2016 AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 Gene3D G3DSA:3.40.250.10 7 145 2.4E-28 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 SUPERFAMILY SSF52821 155 277 4.71E-21 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 Pfam PF00581 Rhodanese-like domain 163 268 4.1E-7 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 Pfam PF00581 Rhodanese-like domain 13 125 7.8E-13 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 SMART SM00450 152 272 1.4E-7 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 SMART SM00450 10 129 1.4E-14 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 Gene3D G3DSA:3.40.250.10 158 277 1.1E-21 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS06570 0c899ddacadaccff108148c4c7bda8f5 280 SUPERFAMILY SSF52821 7 146 1.96E-28 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SMART SM00387 730 839 7.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF00512 His Kinase A (phospho-acceptor) domain 622 686 1.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SMART SM00304 301 354 4.0E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF47384 607 687 3.73E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF52172 868 983 3.98E-21 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:3.30.450.20 75 174 2.2E-13 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF103190 47 177 1.67E-8 T 22-04-2016 IPR029151 Periplasmic sensor domain-like AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 485 6.0E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 517 608 4.1E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF02743 Cache domain 54 206 6.9E-13 T 22-04-2016 IPR033479 Double Cache domain 1 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF08448 PAS fold 367 479 9.2E-18 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF08448 PAS fold 507 603 3.5E-9 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 823 836 4.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 767 781 4.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 799 817 4.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 785 795 4.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:1.10.287.130 613 682 9.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SMART SM00388 621 686 1.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SMART SM00091 361 427 3.8E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF00072 Response regulator receiver domain 868 980 1.3E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423 559 980 4.7E-126 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423 32 46 4.7E-126 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423 359 431 4.7E-126 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SMART SM00448 866 980 9.5E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:3.30.565.10 689 840 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:3.30.450.20 352 475 5.1E-19 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 731 836 1.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF55785 350 476 1.05E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Pfam PF00672 HAMP domain 282 350 9.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:3.40.50.2300 867 983 6.1E-21 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF158472 302 350 1.83E-7 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF55874 676 841 1.96E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 Gene3D G3DSA:3.30.450.20 476 599 1.1E-14 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 SUPERFAMILY SSF55785 474 593 4.19E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423:SF439 559 980 4.7E-126 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423:SF439 32 46 4.7E-126 T 22-04-2016 AMK58_RS01920 fdec0b8cf9e12fd7ba232478b36be671 986 PANTHER PTHR24423:SF439 359 431 4.7E-126 T 22-04-2016 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 3.3E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 Gene3D G3DSA:1.10.10.250 73 142 5.8E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 PANTHER PTHR11661 1 144 2.7E-65 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 Gene3D G3DSA:3.30.1550.10 2 72 1.4E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-13 T 22-04-2016 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 30.281 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 SUPERFAMILY SSF54747 3 73 5.1E-31 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 SMART SM00649 9 142 6.4E-78 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 4.5E-63 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.9E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK58_RS10465 1c83abb3a186d522bbdea2dd67bca07d 144 SUPERFAMILY SSF46906 68 141 3.01E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 Pfam PF00677 Lumazine binding domain 3 85 7.3E-23 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 Pfam PF00677 Lumazine binding domain 98 182 1.3E-23 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 PIRSF PIRSF000498 1 195 1.8E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 191 1.7E-62 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 SUPERFAMILY SSF63380 92 191 1.45E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 SUPERFAMILY SSF63380 1 91 5.36E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 Gene3D G3DSA:2.40.30.20 103 193 2.1E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 Gene3D G3DSA:2.40.30.20 5 102 7.8E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS08320 0b5ae7a246b6bc71244d4e2d89253d93 195 PANTHER PTHR21098 1 191 8.5E-102 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08900 e9b2808820649146f3c84821b29d8518 177 Gene3D G3DSA:3.40.630.30 2 150 5.7E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS08900 e9b2808820649146f3c84821b29d8518 177 Pfam PF00583 Acetyltransferase (GNAT) family 58 148 1.3E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS08900 e9b2808820649146f3c84821b29d8518 177 SUPERFAMILY SSF55729 6 151 9.95E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 Pfam PF01895 PhoU domain 125 208 1.6E-16 T 22-04-2016 IPR026022 PhoU domain AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 Pfam PF01895 PhoU domain 23 108 1.3E-21 T 22-04-2016 IPR026022 PhoU domain AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 SUPERFAMILY SSF109755 9 224 4.92E-66 T 22-04-2016 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 PANTHER PTHR10010:SF14 1 234 1.9E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 PANTHER PTHR10010 1 234 1.9E-67 T 22-04-2016 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 Gene3D G3DSA:1.20.58.220 6 112 2.5E-30 T 22-04-2016 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 Gene3D G3DSA:1.20.58.220 123 221 4.1E-27 T 22-04-2016 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 216 4.8E-64 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS07200 21756d4631d115411ff35bea96f19713 236 PIRSF PIRSF003107 4 223 9.6E-62 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS09515 a6749da29d3cd0dfa5f3c9ac25cc9912 124 Pfam PF06170 Protein of unknown function (DUF983) 28 112 1.6E-31 T 22-04-2016 IPR009325 Protein of unknown function DUF983 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 340 1.3E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Pfam PF12631 MnmE helical domain 123 440 3.4E-54 T 22-04-2016 IPR025867 MnmE, helical domain AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:3.30.1360.120 3 121 3.7E-41 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 PANTHER PTHR11649:SF56 6 443 8.3E-174 T 22-04-2016 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 120 1.3E-37 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Pfam PF01926 50S ribosome-binding GTPase 218 330 1.3E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:1.20.120.430 377 443 6.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:1.20.120.430 122 182 6.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:1.20.120.430 248 271 6.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:3.40.50.300 287 367 2.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00370 451e788e7940ab414961ce299261badd 443 SUPERFAMILY SSF52540 188 363 1.83E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00370 451e788e7940ab414961ce299261badd 443 SUPERFAMILY SSF52540 72 152 1.83E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00370 451e788e7940ab414961ce299261badd 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 2.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 283 2.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Gene3D G3DSA:3.40.50.300 216 247 5.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00370 451e788e7940ab414961ce299261badd 443 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 443 31.93 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 SUPERFAMILY SSF116878 372 443 2.88E-46 T 22-04-2016 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 SUPERFAMILY SSF116878 121 220 2.88E-46 T 22-04-2016 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 PANTHER PTHR11649 6 443 8.3E-174 T 22-04-2016 AMK58_RS00370 451e788e7940ab414961ce299261badd 443 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 443 1.1E-86 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 40 181 8.3E-76 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 147 163 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 PANTHER PTHR11995:SF19 6 181 5.1E-121 T 22-04-2016 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 29 180 41.069 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 PANTHER PTHR11995 6 181 5.1E-121 T 22-04-2016 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 Gene3D G3DSA:3.40.50.700 51 177 2.9E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 67 175 8.5E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK58_RS06125 e03015fed80a5fe87f8f19199609721d 187 SUPERFAMILY SSF56770 38 183 3.66E-66 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:2.160.10.10 675 831 5.1E-25 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:3.40.50.980 7 176 9.9E-45 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:2.160.10.10 969 1097 8.2E-15 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 35 428 2.2E-124 T 22-04-2016 IPR010071 Amino acid adenylation domain AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:3.30.300.30 398 494 1.2E-31 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:1.10.1200.10 504 585 3.4E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 PANTHER PTHR24095 5 486 4.8E-166 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Pfam PF00550 Phosphopantetheine attachment site 526 581 1.0E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:3.40.50.980 177 313 1.8E-40 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 486 2.7E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 SUPERFAMILY SSF51161 1154 1312 2.36E-17 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 615 1309 1.0E-182 T 22-04-2016 IPR012728 Non-ribosomal peptide synthetase, C-terminal AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 SUPERFAMILY SSF56801 9 521 1.57E-148 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 SUPERFAMILY SSF51161 712 834 1.05E-13 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:2.30.38.10 314 393 1.4E-23 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Gene3D G3DSA:2.160.10.10 1211 1314 1.1E-24 T 22-04-2016 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 Pfam PF00501 AMP-binding enzyme 15 404 2.3E-95 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 SUPERFAMILY SSF51161 959 1078 3.6E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS08020 85ac312dec870fb6da06896b25f59ff7 1327 SUPERFAMILY SSF47336 508 581 5.37E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 SUPERFAMILY SSF51445 85 515 5.28E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357:SF110 493 589 9.8E-92 T 22-04-2016 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357:SF110 379 468 9.8E-92 T 22-04-2016 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 14 534 2.9E-180 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357 379 468 9.8E-92 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357 2 358 9.8E-92 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 Gene3D G3DSA:2.60.40.10 8 87 3.7E-21 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 Pfam PF11941 Domain of unknown function (DUF3459) 500 611 6.1E-19 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PIRSF PIRSF006337 4 545 2.7E-184 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 SMART SM00642 84 453 1.5E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 SUPERFAMILY SSF81296 8 89 1.68E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357:SF110 2 358 9.8E-92 T 22-04-2016 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 Pfam PF00128 Alpha amylase, catalytic domain 128 203 1.9E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 PANTHER PTHR10357 493 589 9.8E-92 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 Gene3D G3DSA:3.20.20.80 104 458 1.0E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS04135 6d631ead3df3020c4b8207c3b1ab935f 636 Gene3D G3DSA:3.20.20.80 492 515 1.0E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS00660 06dece1e1f8193e064c1c45c4270e053 351 Pfam PF01522 Polysaccharide deacetylase 93 219 6.7E-23 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS00660 06dece1e1f8193e064c1c45c4270e053 351 PANTHER PTHR34216:SF1 39 335 3.5E-36 T 22-04-2016 AMK58_RS00660 06dece1e1f8193e064c1c45c4270e053 351 PANTHER PTHR34216 39 335 3.5E-36 T 22-04-2016 AMK58_RS00660 06dece1e1f8193e064c1c45c4270e053 351 SUPERFAMILY SSF88713 56 224 7.7E-31 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS00660 06dece1e1f8193e064c1c45c4270e053 351 Gene3D G3DSA:3.20.20.370 75 221 5.6E-21 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS03780 2e74192fe363e52546cd5ac44ce686ba 149 Pfam PF03733 Inner membrane component domain 7 57 4.7E-17 T 22-04-2016 IPR005185 Inner membrane component domain AMK58_RS03780 2e74192fe363e52546cd5ac44ce686ba 149 Pfam PF03733 Inner membrane component domain 79 128 1.8E-17 T 22-04-2016 IPR005185 Inner membrane component domain AMK58_RS03780 2e74192fe363e52546cd5ac44ce686ba 149 PANTHER PTHR31503 4 144 8.6E-41 T 22-04-2016 AMK58_RS03780 2e74192fe363e52546cd5ac44ce686ba 149 PIRSF PIRSF028777 4 141 5.3E-46 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 AMK58_RS03780 2e74192fe363e52546cd5ac44ce686ba 149 PANTHER PTHR31503:SF17 4 144 8.6E-41 T 22-04-2016 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 SUPERFAMILY SSF53623 94 317 1.96E-65 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Gene3D G3DSA:3.90.190.20 321 464 1.5E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Gene3D G3DSA:3.40.1190.10 96 320 1.3E-77 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Pfam PF08245 Mur ligase middle domain 113 298 6.8E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 40.945 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 459 3.2E-157 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 SUPERFAMILY SSF51984 10 95 8.63E-28 T 22-04-2016 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Pfam PF01225 Mur ligase family, catalytic domain 10 108 5.7E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 404 6.4E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 PANTHER PTHR23135:SF5 3 455 4.0E-196 T 22-04-2016 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 SUPERFAMILY SSF53244 318 461 2.56E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 PANTHER PTHR23135 3 455 4.0E-196 T 22-04-2016 AMK58_RS03915 6333819131736ab6a3da4159ed704eb8 471 Gene3D G3DSA:3.40.50.720 10 95 4.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS13725 b03a4ad7089aabe3c3f27536ef173440 231 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 207 1.1E-27 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS13725 b03a4ad7089aabe3c3f27536ef173440 231 PANTHER PTHR30383 44 224 4.3E-42 T 22-04-2016 AMK58_RS13725 b03a4ad7089aabe3c3f27536ef173440 231 Gene3D G3DSA:3.40.50.1110 46 223 2.1E-53 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS13725 b03a4ad7089aabe3c3f27536ef173440 231 SUPERFAMILY SSF52266 42 223 1.05E-50 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 SMART SM00938 4 105 1.3E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 SUPERFAMILY SSF54913 1 112 1.11E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PANTHER PTHR30115 1 112 3.8E-65 T 22-04-2016 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 Gene3D G3DSA:3.30.70.120 1 112 5.4E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS06055 2805a07921d0bd531e8f5a9ec7153c54 112 PIRSF PIRSF039144 1 112 7.6E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK58_RS12850 eefef5cafdd9b81c83c6f038a3796b26 255 PANTHER PTHR42208:SF1 21 246 7.4E-27 T 22-04-2016 AMK58_RS12850 eefef5cafdd9b81c83c6f038a3796b26 255 PANTHER PTHR42208 21 246 7.4E-27 T 22-04-2016 AMK58_RS12850 eefef5cafdd9b81c83c6f038a3796b26 255 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 31 243 1.6E-42 T 22-04-2016 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 Gene3D G3DSA:3.40.50.2300 2 153 1.1E-13 T 22-04-2016 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 PANTHER PTHR26402:SF151 4 214 2.1E-38 T 22-04-2016 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 SMART SM00448 4 116 0.0024 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 PANTHER PTHR26402 4 214 2.1E-38 T 22-04-2016 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 7.0E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 SUPERFAMILY SSF46894 143 215 6.8E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 SUPERFAMILY SSF52172 1 121 2.42E-11 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 SMART SM00421 152 209 2.7E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 7.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 7.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 7.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07050 7b8ff54c145a83d1008dd8f23485a897 220 Gene3D G3DSA:1.10.10.10 154 214 5.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10520 3160f39bd8eb6b9f1a18fad00dcde2ab 190 Pfam PF02563 Polysaccharide biosynthesis/export protein 37 111 1.7E-20 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK58_RS10520 3160f39bd8eb6b9f1a18fad00dcde2ab 190 Pfam PF10531 SLBB domain 118 160 3.1E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK58_RS10520 3160f39bd8eb6b9f1a18fad00dcde2ab 190 Gene3D G3DSA:3.30.1950.10 45 107 5.3E-18 T 22-04-2016 AMK58_RS10520 3160f39bd8eb6b9f1a18fad00dcde2ab 190 Gene3D G3DSA:3.10.560.10 108 166 1.0E-10 T 22-04-2016 AMK58_RS10520 3160f39bd8eb6b9f1a18fad00dcde2ab 190 PANTHER PTHR33619 40 187 8.0E-36 T 22-04-2016 AMK58_RS26305 c70d6c89483901f18a1888517f9fe6a2 104 Gene3D G3DSA:3.40.190.10 1 72 2.0E-20 T 22-04-2016 AMK58_RS26305 c70d6c89483901f18a1888517f9fe6a2 104 Pfam PF03466 LysR substrate binding domain 1 91 5.6E-16 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS26305 c70d6c89483901f18a1888517f9fe6a2 104 SUPERFAMILY SSF53850 1 90 7.78E-14 T 22-04-2016 AMK58_RS26305 c70d6c89483901f18a1888517f9fe6a2 104 PANTHER PTHR30537:SF26 1 89 3.7E-20 T 22-04-2016 AMK58_RS26305 c70d6c89483901f18a1888517f9fe6a2 104 PANTHER PTHR30537 1 89 3.7E-20 T 22-04-2016 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PANTHER PTHR11910 14 186 2.3E-53 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.335 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 181 2.3E-47 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 12 179 8.6E-39 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 Gene3D G3DSA:1.10.520.20 8 112 1.7E-20 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 SUPERFAMILY SSF47928 10 112 6.28E-21 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PRINTS PR00125 ATP synthase delta subunit signature 157 175 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PRINTS PR00125 ATP synthase delta subunit signature 81 92 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PRINTS PR00125 ATP synthase delta subunit signature 142 157 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PRINTS PR00125 ATP synthase delta subunit signature 92 106 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS11780 27826dc1fa21ed1aca95feb6909f2a0e 189 PRINTS PR00125 ATP synthase delta subunit signature 11 30 3.0E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 Pfam PF00825 Ribonuclease P 7 120 2.8E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 123 16.132 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 PANTHER PTHR33992 1 142 1.2E-21 T 22-04-2016 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 62 76 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 Gene3D G3DSA:3.30.230.10 6 123 3.7E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 105 1.3E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 12 98 6.0E-4 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK58_RS12445 06adbfd9b57268576ff263cd0975dfec 160 SUPERFAMILY SSF54211 6 124 2.33E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 ProSitePatterns PS00380 Rhodanese signature 1. 49 60 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 PANTHER PTHR11364 13 296 4.6E-118 T 22-04-2016 AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 PANTHER PTHR11364:SF13 13 296 4.6E-118 T 22-04-2016 AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 SUPERFAMILY SSF52821 12 162 9.3E-42 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 SUPERFAMILY SSF52821 166 295 2.62E-34 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 Pfam PF00581 Rhodanese-like domain 18 137 9.7E-15 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 Pfam PF00581 Rhodanese-like domain 166 281 8.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 SMART SM00450 164 286 7.1E-18 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 SMART SM00450 15 141 1.7E-19 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 Gene3D G3DSA:3.40.250.10 162 292 2.3E-39 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 ProSitePatterns PS00683 Rhodanese C-terminal signature. 270 280 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMK58_RS07700 eaa3877282dcdb7f0e34a8d6d0be058c 300 Gene3D G3DSA:3.40.250.10 12 159 1.1E-46 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 PANTHER PTHR30477 1 117 8.7E-73 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 PANTHER PTHR30477 139 291 8.7E-73 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 PANTHER PTHR30477:SF1 1 117 8.7E-73 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 PANTHER PTHR30477:SF1 139 291 8.7E-73 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 Gene3D G3DSA:3.40.50.1980 18 208 8.6E-50 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 317 2.9E-67 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 SUPERFAMILY SSF53807 26 318 8.83E-81 T 22-04-2016 AMK58_RS00590 089e4c4ca53508d9ac46a406217a45d5 320 Gene3D G3DSA:3.40.50.1980 209 319 4.1E-27 T 22-04-2016 AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 182 39.27 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 PIRSF PIRSF039093 5 182 8.0E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 PANTHER PTHR32194 1 182 1.4E-120 T 22-04-2016 AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 SUPERFAMILY SSF56235 8 181 1.45E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 Gene3D G3DSA:3.60.20.10 12 182 1.3E-83 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 182 8.8E-82 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK58_RS00520 9afa7b12ed9c27ba23a355c510d20304 182 Pfam PF00227 Proteasome subunit 10 180 1.1E-19 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AMK58_RS00815 03b32240c68c0232ea7054217b4017ff 143 Pfam PF01475 Ferric uptake regulator family 17 112 4.4E-20 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK58_RS00815 03b32240c68c0232ea7054217b4017ff 143 PANTHER PTHR33202:SF3 5 134 8.3E-48 T 22-04-2016 AMK58_RS00815 03b32240c68c0232ea7054217b4017ff 143 PANTHER PTHR33202 5 134 8.3E-48 T 22-04-2016 AMK58_RS00815 03b32240c68c0232ea7054217b4017ff 143 Gene3D G3DSA:1.10.10.10 8 89 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00815 03b32240c68c0232ea7054217b4017ff 143 SUPERFAMILY SSF46785 9 132 8.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 Gene3D G3DSA:3.90.76.10 71 169 6.9E-21 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 Gene3D G3DSA:3.10.105.10 353 575 2.0E-30 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 SUPERFAMILY SSF53850 64 204 7.06E-70 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 SUPERFAMILY SSF53850 232 604 7.06E-70 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290 15 211 1.0E-91 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290:SF18 15 211 1.0E-91 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 494 1.1E-55 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290:SF18 539 622 1.0E-91 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290 539 622 1.0E-91 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290:SF18 238 521 1.0E-91 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 Gene3D G3DSA:3.40.190.10 170 352 6.8E-9 T 22-04-2016 AMK58_RS00245 82f7ce2a2e57856ed9ff388562472172 622 PANTHER PTHR30290 238 521 1.0E-91 T 22-04-2016 AMK58_RS01335 2eb351fd41947b4158b64b23d0f146a1 366 PANTHER PTHR42110 38 362 4.2E-66 T 22-04-2016 AMK58_RS01335 2eb351fd41947b4158b64b23d0f146a1 366 Pfam PF06089 L-asparaginase II 41 363 1.1E-112 T 22-04-2016 IPR010349 L-asparaginase II AMK58_RS01335 2eb351fd41947b4158b64b23d0f146a1 366 PANTHER PTHR42110:SF1 38 362 4.2E-66 T 22-04-2016 AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 PANTHER PTHR24220 136 273 1.6E-115 T 22-04-2016 AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 PANTHER PTHR24220 13 117 1.6E-115 T 22-04-2016 AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 SUPERFAMILY SSF52540 10 269 6.59E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 SMART SM00382 36 246 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 246 268 4.8E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 Gene3D G3DSA:3.40.50.300 7 267 3.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 Pfam PF00005 ABC transporter 28 196 2.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 PANTHER PTHR24220:SF358 136 273 1.6E-115 T 22-04-2016 AMK58_RS07260 5754f41b3f85a8fcc48e9e7255d3880a 294 PANTHER PTHR24220:SF358 13 117 1.6E-115 T 22-04-2016 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 PANTHER PTHR11544 1 51 1.3E-23 T 22-04-2016 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 67 1.4E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 SUPERFAMILY SSF50249 1 68 2.14E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 SMART SM00357 3 69 3.8E-26 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 PIRSF PIRSF002599 1 69 3.5E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 Gene3D G3DSA:2.40.50.140 2 67 7.2E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 PRINTS PR00050 Cold shock protein signature 25 34 3.4E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 PRINTS PR00050 Cold shock protein signature 40 58 3.4E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12180 ab9eeecdb0b0177ee03a15c8f177656e 69 PRINTS PR00050 Cold shock protein signature 4 19 3.4E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Gene3D G3DSA:1.10.287.950 271 479 5.0E-39 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SMART SM00283 268 494 8.7E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 PANTHER PTHR24422:SF12 1 490 2.0E-152 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 311 1.99E-8 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 1.99E-8 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 130 2.4E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 253 5.5E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SMART SM00086 209 251 7.6E-4 T 22-04-2016 IPR001610 PAC motif AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SMART SM00086 87 129 4.2E-4 T 22-04-2016 IPR001610 PAC motif AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SUPERFAMILY SSF58104 260 493 2.09E-45 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Gene3D G3DSA:3.30.450.20 146 250 1.1E-22 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Gene3D G3DSA:3.30.450.20 25 128 7.0E-22 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 488 1.2E-30 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SUPERFAMILY SSF55785 25 129 3.14E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 SUPERFAMILY SSF55785 146 253 1.1E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Pfam PF13426 PAS domain 25 128 5.1E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 PANTHER PTHR24422 1 490 2.0E-152 T 22-04-2016 AMK58_RS04640 e7e6c8e26e53f7dc7c72b052fc820908 495 Pfam PF08447 PAS fold 159 244 1.7E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS11695 aed4a1be34b2ae0648f7504a47ffb6a2 411 Gene3D G3DSA:1.20.141.10 229 375 1.1E-6 T 22-04-2016 AMK58_RS11695 aed4a1be34b2ae0648f7504a47ffb6a2 411 SUPERFAMILY SSF53955 230 384 3.09E-6 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Gene3D G3DSA:3.30.1330.10 403 549 5.0E-53 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Gene3D G3DSA:3.30.1330.10 39 183 1.1E-49 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 PANTHER PTHR10099:SF2 3 726 0.0 T 22-04-2016 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 PANTHER PTHR10099 3 726 0.0 T 22-04-2016 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Pfam PF02769 AIR synthase related protein, C-terminal domain 191 343 9.9E-35 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Pfam PF02769 AIR synthase related protein, C-terminal domain 561 694 4.1E-19 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 SUPERFAMILY SSF56042 188 414 1.32E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 SUPERFAMILY SSF55326 4 185 7.78E-51 T 22-04-2016 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 7 717 1.1E-281 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 726 319.366 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 SUPERFAMILY SSF56042 558 696 1.17E-35 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 PIRSF PIRSF001587 1 723 3.9E-285 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Pfam PF00586 AIR synthase related protein, N-terminal domain 76 177 1.9E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Pfam PF00586 AIR synthase related protein, N-terminal domain 430 546 2.4E-23 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK58_RS11465 371193a789664aa89730a8238a79733c 726 SUPERFAMILY SSF55326 389 550 5.5E-52 T 22-04-2016 AMK58_RS11465 371193a789664aa89730a8238a79733c 726 Gene3D G3DSA:3.90.650.10 202 344 8.8E-6 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK58_RS04290 230acbcc6e483d1daa4b9851242c4b8c 277 SUPERFAMILY SSF53850 30 261 3.23E-35 T 22-04-2016 AMK58_RS04290 230acbcc6e483d1daa4b9851242c4b8c 277 Gene3D G3DSA:3.40.190.10 16 156 1.7E-39 T 22-04-2016 AMK58_RS04290 230acbcc6e483d1daa4b9851242c4b8c 277 Pfam PF12849 PBP superfamily domain 31 252 1.8E-30 T 22-04-2016 IPR024370 PBP domain AMK58_RS04290 230acbcc6e483d1daa4b9851242c4b8c 277 Gene3D G3DSA:3.40.190.10 192 274 1.2E-27 T 22-04-2016 AMK58_RS04290 230acbcc6e483d1daa4b9851242c4b8c 277 PANTHER PTHR37945 11 277 1.3E-106 T 22-04-2016 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 360 35.991 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 PANTHER PTHR10233:SF6 16 348 3.1E-125 T 22-04-2016 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 PANTHER PTHR10233 16 348 3.1E-125 T 22-04-2016 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 Gene3D G3DSA:1.20.120.420 9 163 1.9E-45 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 SUPERFAMILY SSF100950 2 353 2.58E-108 T 22-04-2016 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 Pfam PF01008 Initiation factor 2 subunit family 52 350 1.3E-55 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 19 349 7.3E-123 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 38 349 6.8E-87 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 AMK58_RS12780 1fb4e65610fa5ef2e6de6ef7f7cf2778 366 Gene3D G3DSA:3.40.50.10470 164 353 1.9E-57 T 22-04-2016 AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 PANTHER PTHR30231 264 392 5.8E-13 T 22-04-2016 AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 Gene3D G3DSA:3.30.420.10 260 413 4.2E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 SMART SM00479 246 419 6.6E-5 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 Pfam PF00929 Exonuclease 267 391 2.5E-5 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 SUPERFAMILY SSF55785 116 196 1.93E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 SUPERFAMILY SSF53098 261 392 7.36E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 Gene3D G3DSA:3.30.450.20 116 196 7.7E-7 T 22-04-2016 AMK58_RS08845 481b3621cda4bf42abb1f65ddf13feaf 437 Pfam PF13188 PAS domain 116 166 2.5E-4 T 22-04-2016 IPR000014 PAS domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Gene3D G3DSA:3.30.70.870 303 402 3.0E-33 T 22-04-2016 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Gene3D G3DSA:3.30.70.240 403 483 5.9E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Pfam PF00679 Elongation factor G C-terminus 399 482 4.7E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 SUPERFAMILY SSF54980 400 514 2.83E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PRINTS PR00315 GTP-binding elongation factor signature 5 18 4.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PRINTS PR00315 GTP-binding elongation factor signature 85 96 4.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PRINTS PR00315 GTP-binding elongation factor signature 69 79 4.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PRINTS PR00315 GTP-binding elongation factor signature 121 130 4.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Gene3D G3DSA:3.40.50.300 2 204 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 148 1.2E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Pfam PF03144 Elongation factor Tu domain 2 218 289 1.1E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PANTHER PTHR23115:SF14 2 594 1.0E-272 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Pfam PF00009 Elongation factor Tu GTP binding domain 2 194 1.8E-54 T 22-04-2016 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 SUPERFAMILY SSF52540 3 205 5.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Gene3D G3DSA:2.40.30.10 205 302 8.5E-25 T 22-04-2016 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 SUPERFAMILY SSF54980 302 387 3.36E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 SUPERFAMILY SSF50447 150 297 1.1E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 600 2.5E-283 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 Gene3D G3DSA:2.40.50.250 484 578 1.0E-39 T 22-04-2016 AMK58_RS08430 29e8e781d0ffe6dfd7aa7503a0ece00b 608 PANTHER PTHR23115 2 594 1.0E-272 T 22-04-2016 AMK58_RS10285 f07eb80e1f5ac3350ce12b4c06d7e308 290 Gene3D G3DSA:3.40.630.40 39 277 3.3E-80 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS10285 f07eb80e1f5ac3350ce12b4c06d7e308 290 PIRSF PIRSF029730 27 285 5.6E-94 T 22-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 AMK58_RS10285 f07eb80e1f5ac3350ce12b4c06d7e308 290 SUPERFAMILY SSF53187 31 277 1.51E-76 T 22-04-2016 AMK58_RS10285 f07eb80e1f5ac3350ce12b4c06d7e308 290 Pfam PF05013 N-formylglutamate amidohydrolase 48 255 3.1E-47 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 PANTHER PTHR10996:SF114 15 304 2.1E-103 T 22-04-2016 AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 Gene3D G3DSA:3.40.50.720 110 276 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 212 228 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 273 8.6E-46 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 SUPERFAMILY SSF52283 35 109 1.7E-5 T 22-04-2016 AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 SUPERFAMILY SSF51735 94 274 3.72E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 PANTHER PTHR10996 15 304 2.1E-103 T 22-04-2016 AMK58_RS11980 4042ab675ac9a804f5b5cde0f9da47b1 308 Gene3D G3DSA:3.40.50.720 10 109 1.2E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS28490 e56cf27463d83e5ee5361752300ad0a1 108 SUPERFAMILY SSF52540 64 107 3.37E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28490 e56cf27463d83e5ee5361752300ad0a1 108 Gene3D G3DSA:3.40.50.300 68 107 1.4E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28490 e56cf27463d83e5ee5361752300ad0a1 108 PANTHER PTHR23115 46 108 1.6E-25 T 22-04-2016 AMK58_RS28490 e56cf27463d83e5ee5361752300ad0a1 108 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 41 1.1E-11 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal AMK58_RS28490 e56cf27463d83e5ee5361752300ad0a1 108 PANTHER PTHR23115:SF184 46 108 1.6E-25 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 SUPERFAMILY SSF81593 833 980 3.06E-29 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Pfam PF08335 GlnD PII-uridylyltransferase 326 467 2.6E-37 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Pfam PF08335 GlnD PII-uridylyltransferase 850 934 1.2E-10 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Gene3D G3DSA:3.30.460.10 140 313 2.0E-50 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Gene3D G3DSA:3.30.460.10 669 828 5.0E-48 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 PANTHER PTHR30621 42 990 5.7E-240 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 56 988 17.085 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 SUPERFAMILY SSF81301 550 830 2.78E-71 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 SUPERFAMILY SSF81593 315 467 4.39E-38 T 22-04-2016 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 62 305 5.6E-63 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 579 822 3.5E-60 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMK58_RS04880 ac36991d52bdb0541fd8feffdebc7015 1005 SUPERFAMILY SSF81301 49 314 5.32E-66 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 SMART SM00283 409 663 3.9E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 PANTHER PTHR32089:SF40 220 355 2.1E-151 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 PANTHER PTHR32089:SF40 387 666 2.1E-151 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 SMART SM00304 320 373 2.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 SMART SM01358 39 291 2.2E-43 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 SUPERFAMILY SSF58104 415 662 7.32E-65 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 SUPERFAMILY SSF58104 349 375 7.32E-65 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 PANTHER PTHR32089 220 355 2.1E-151 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 PANTHER PTHR32089 387 666 2.1E-151 T 22-04-2016 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 Pfam PF00672 HAMP domain 302 368 5.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 662 2.8E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 140 7.1E-7 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS11605 553a2fee317aa07f67cd33347ca24e1e 669 Gene3D G3DSA:1.10.287.950 424 632 4.5E-45 T 22-04-2016 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 Gene3D G3DSA:1.20.1300.10 21 123 3.2E-37 T 22-04-2016 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 Gene3D G3DSA:1.20.5.540 4 17 8.5E-6 T 22-04-2016 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 124 1.2E-39 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 PANTHER PTHR10978 5 129 2.9E-36 T 22-04-2016 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 PIRSF PIRSF000178 1 126 3.2E-38 T 22-04-2016 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 120 3.6E-32 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMK58_RS02670 c2a6c9e350c9ecea2d7c9809d051cf88 129 SUPERFAMILY SSF81343 6 123 7.36E-35 T 22-04-2016 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 215 346 9.8E-33 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 SUPERFAMILY SSF52518 386 564 3.5E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 412 556 4.9E-24 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Gene3D G3DSA:3.40.50.1220 207 361 1.4E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 SUPERFAMILY SSF52467 207 370 7.77E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 21 575 1.9E-301 T 22-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Gene3D G3DSA:3.40.50.970 24 192 1.6E-46 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 SUPERFAMILY SSF52518 23 192 1.23E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 24 191 4.7E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 Gene3D G3DSA:3.40.50.970 382 565 1.0E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 PANTHER PTHR18968:SF138 2 568 4.2E-197 T 22-04-2016 AMK58_RS06920 e44b020441c23f3b4f798cae0d8fcfd0 585 PANTHER PTHR18968 2 568 4.2E-197 T 22-04-2016 AMK58_RS06845 a199c2d9c5049de5e0f32ed61ba6901e 623 Gene3D G3DSA:1.10.287.510 259 376 1.3E-4 T 22-04-2016 AMK58_RS06845 a199c2d9c5049de5e0f32ed61ba6901e 623 Gene3D G3DSA:3.40.50.300 2 121 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06845 a199c2d9c5049de5e0f32ed61ba6901e 623 Gene3D G3DSA:3.40.50.300 179 207 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06845 a199c2d9c5049de5e0f32ed61ba6901e 623 Gene3D G3DSA:3.40.50.300 489 596 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06845 a199c2d9c5049de5e0f32ed61ba6901e 623 Pfam PF12532 Protein of unknown function (DUF3732) 443 616 1.2E-52 T 22-04-2016 IPR022205 Protein of unknown function DUF3732 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Gene3D G3DSA:2.30.42.10 105 181 2.5E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Pfam PF13180 PDZ domain 99 179 3.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 SUPERFAMILY SSF50156 87 182 8.39E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Gene3D G3DSA:3.90.226.10 182 365 8.8E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Gene3D G3DSA:3.90.226.10 441 461 8.8E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Gene3D G3DSA:3.30.750.44 45 104 3.2E-10 T 22-04-2016 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 51 368 6.8E-105 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 SMART SM00245 172 363 1.8E-79 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 PANTHER PTHR32060 52 387 4.4E-121 T 22-04-2016 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 SMART SM00228 99 170 2.3E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 SUPERFAMILY SSF52096 190 367 6.3E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 SUPERFAMILY SSF52096 27 117 6.3E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS11740 147044e51d21103edb6b1b562f2f6a76 470 Pfam PF03572 Peptidase family S41 196 362 2.0E-58 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 PIRSF PIRSF031715 1 618 1.1E-257 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 SMART SM00327 404 614 0.0015 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 Pfam PF06213 Cobalamin biosynthesis protein CobT 5 276 7.7E-92 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 SUPERFAMILY SSF53300 407 601 1.25E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 Gene3D G3DSA:3.40.50.410 408 582 1.4E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 393 610 6.2E-112 T 22-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS12570 ab1d9f7049e754470ffe16d1191fdba8 621 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 9 611 6.8E-261 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 SUPERFAMILY SSF56349 169 366 1.44E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 PANTHER PTHR30349 79 346 6.8E-17 T 22-04-2016 AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 Gene3D G3DSA:1.10.150.130 73 169 1.2E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 SUPERFAMILY SSF47823 73 168 1.49E-20 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 Pfam PF00589 Phage integrase family 177 354 3.6E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 Gene3D G3DSA:1.10.443.10 170 355 4.9E-50 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS13400 d82e6a12de4bcf4ab557c2913fb41c7f 367 PANTHER PTHR30349:SF5 79 346 6.8E-17 T 22-04-2016 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 Hamap MF_01220_B Uridylate kinase [pyrH]. 14 247 44.398 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 PANTHER PTHR21499 15 251 1.0E-109 T 22-04-2016 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 PANTHER PTHR21499:SF23 15 251 1.0E-109 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 SUPERFAMILY SSF53633 15 246 4.84E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 Gene3D G3DSA:3.40.1160.10 15 247 4.3E-86 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 17 247 7.0E-100 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 PIRSF PIRSF005650 12 251 1.3E-94 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK58_RS06275 786c06a1bdc76bf67de294679283585a 251 Pfam PF00696 Amino acid kinase family 17 226 5.7E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 Gene3D G3DSA:1.10.10.10 5 132 1.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 Pfam PF01047 MarR family 25 82 2.2E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 SUPERFAMILY SSF46785 3 133 3.34E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 74 1.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 94 1.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 128 1.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 ProSitePatterns PS01117 MarR-type HTH domain signature. 57 91 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 SMART SM00347 18 118 9.2E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06760 47d1c8ab5e583922dad906a80427def7 142 PANTHER PTHR33164 1 142 4.0E-24 T 22-04-2016 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 PIRSF PIRSF002131 1 132 3.5E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site AMK58_RS05810 253fd8e7773020739f252298834b7531 132 SUPERFAMILY SSF53137 17 132 3.71E-50 T 22-04-2016 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 1.7E-58 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 Pfam PF00411 Ribosomal protein S11 22 131 1.1E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 PANTHER PTHR11759 13 132 1.2E-70 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 132 33.558 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05810 253fd8e7773020739f252298834b7531 132 Gene3D G3DSA:3.30.420.80 9 132 1.2E-56 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 219 232 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 Pfam PF00682 HMGL-like 10 249 6.1E-64 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 Gene3D G3DSA:3.20.20.70 1 249 2.9E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 PANTHER PTHR10277 1 249 8.9E-128 T 22-04-2016 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 PANTHER PTHR10277:SF28 1 249 8.9E-128 T 22-04-2016 AMK58_RS17850 b808860b525f87427630f4b1b5f4a6b9 249 SUPERFAMILY SSF51569 2 249 3.3E-76 T 22-04-2016 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 Pfam PF05683 Fumarase C-terminus 335 540 9.6E-93 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 376 540 1.8E-55 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 Gene3D G3DSA:3.20.130.10 358 540 3.1E-73 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 ProSitePatterns PS00163 Fumarate lyases signature. 459 468 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 PANTHER PTHR30389:SF0 5 542 0.0 T 22-04-2016 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 PANTHER PTHR30389 5 542 0.0 T 22-04-2016 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 SUPERFAMILY SSF117457 364 539 6.02E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 PIRSF PIRSF001394 33 544 1.5E-221 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS08025 a4d4a9676771e81cfa80c95ee292ddb0 544 Pfam PF05681 Fumarate hydratase (Fumerase) 54 328 4.5E-83 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 PANTHER PTHR24220:SF589 11 239 3.0E-81 T 22-04-2016 AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 Pfam PF00005 ABC transporter 29 165 7.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 SMART SM00382 36 215 4.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 SUPERFAMILY SSF52540 10 224 6.41E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 Gene3D G3DSA:3.40.50.300 4 213 4.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08175 b9d6271c42ace9e26b3ef87afaa2c9dc 250 PANTHER PTHR24220 11 239 3.0E-81 T 22-04-2016 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 PANTHER PTHR11986:SF81 16 465 5.4E-235 T 22-04-2016 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 SUPERFAMILY SSF53383 22 458 1.14E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 Pfam PF00202 Aminotransferase class-III 37 457 8.8E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 PIRSF PIRSF000521 32 460 3.2E-30 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 PANTHER PTHR11986 16 465 5.4E-235 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 Gene3D G3DSA:3.90.1150.10 357 459 4.2E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 Gene3D G3DSA:3.90.1150.10 18 76 4.2E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS12135 08fa834b76379c1aa7687a1e0145c441 466 Gene3D G3DSA:3.40.640.10 77 354 1.8E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS13590 c4a8127a5f1ad03569e8dfbbb255ba11 198 Pfam PF00775 Dioxygenase 24 197 1.1E-26 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMK58_RS13590 c4a8127a5f1ad03569e8dfbbb255ba11 198 Gene3D G3DSA:2.60.130.10 13 197 8.2E-52 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK58_RS13590 c4a8127a5f1ad03569e8dfbbb255ba11 198 SUPERFAMILY SSF49482 11 196 8.63E-53 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK58_RS13590 c4a8127a5f1ad03569e8dfbbb255ba11 198 PANTHER PTHR33711 8 196 7.9E-39 T 22-04-2016 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 SUPERFAMILY SSF51161 6 168 4.71E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 Gene3D G3DSA:1.10.3130.10 2 59 1.5E-22 T 22-04-2016 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 Gene3D G3DSA:2.160.10.10 60 177 8.2E-33 T 22-04-2016 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 PANTHER PTHR23416:SF55 1 225 6.1E-95 T 22-04-2016 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.8E-72 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 PIRSF PIRSF000441 1 229 5.7E-82 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 PANTHER PTHR23416 1 225 6.1E-95 T 22-04-2016 AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 150 3.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS04905 1fdd509d3d6d44ab5e597e291d236b4d 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 1.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 PANTHER PTHR21299:SF1 11 291 4.4E-123 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 Gene3D G3DSA:3.30.1300.10 190 293 1.0E-32 T 22-04-2016 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 Hamap MF_00158 Pantothenate synthetase [panC]. 17 293 38.636 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 39 90 5.0E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 Pfam PF02569 Pantoate-beta-alanine ligase 18 291 3.9E-97 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 Gene3D G3DSA:3.40.50.620 13 188 1.2E-69 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 18 291 1.2E-86 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 PANTHER PTHR21299 11 291 4.4E-123 T 22-04-2016 AMK58_RS08635 fa9e051f33ee817f0e09feb1ee04f54b 296 SUPERFAMILY SSF52374 15 293 8.58E-103 T 22-04-2016 AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 Gene3D G3DSA:3.60.15.10 22 291 2.0E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 PANTHER PTHR12553 22 291 7.8E-73 T 22-04-2016 AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 PANTHER PTHR12553:SF29 22 291 7.8E-73 T 22-04-2016 AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 SUPERFAMILY SSF56281 22 291 3.01E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 Pfam PF12706 Beta-lactamase superfamily domain 58 257 8.3E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS00265 5c9539b0f9431eecaa21e29ad57bb85f 291 SMART SM00849 44 234 3.3E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS02280 a30f2d5fa7f732431730ab08f43b7599 144 PANTHER PTHR39434 6 144 3.8E-46 T 22-04-2016 AMK58_RS02280 a30f2d5fa7f732431730ab08f43b7599 144 SUPERFAMILY SSF54593 12 136 2.28E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS02280 a30f2d5fa7f732431730ab08f43b7599 144 Gene3D G3DSA:3.10.180.10 12 138 1.5E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS02280 a30f2d5fa7f732431730ab08f43b7599 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 132 4.7E-9 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK58_RS02280 a30f2d5fa7f732431730ab08f43b7599 144 PANTHER PTHR39434:SF1 6 144 3.8E-46 T 22-04-2016 AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 5.6E-48 T 22-04-2016 AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 Gene3D G3DSA:3.40.50.720 4 244 1.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.9E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.9E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.9E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PANTHER PTHR24322:SF264 9 139 2.8E-50 T 22-04-2016 AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PANTHER PTHR24322:SF264 156 188 2.8E-50 T 22-04-2016 AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 SUPERFAMILY SSF51735 5 244 2.72E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PANTHER PTHR24322 9 139 2.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS12160 90b11245a79328c951eefc0209648e73 245 PANTHER PTHR24322 156 188 2.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 Gene3D G3DSA:3.40.50.1390 3 122 6.9E-38 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 Gene3D G3DSA:1.10.10.60 140 182 6.6E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 SMART SM00857 2 138 1.6E-52 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 Pfam PF02796 Helix-turn-helix domain of resolvase 140 182 7.2E-7 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 PANTHER PTHR30461 1 183 9.6E-44 T 22-04-2016 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 SUPERFAMILY SSF53041 2 137 3.4E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK58_RS02820 3e42ad28dbe8bcb75f952dbec3bf7a63 193 Pfam PF00239 Resolvase, N terminal domain 3 137 1.8E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 PANTHER PTHR30173 3 166 3.4E-36 T 22-04-2016 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 Pfam PF04542 Sigma-70 region 2 9 72 4.4E-10 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 Pfam PF08281 Sigma-70, region 4 101 151 1.7E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 SUPERFAMILY SSF88946 5 80 3.61E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 PANTHER PTHR30173:SF6 3 166 3.4E-36 T 22-04-2016 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 Gene3D G3DSA:1.10.10.10 94 156 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 154 4.9E-19 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 Gene3D G3DSA:1.10.1740.10 5 73 1.1E-17 T 22-04-2016 AMK58_RS09965 bceb63d3eb16c7421c32d96f7cfb108b 167 SUPERFAMILY SSF88659 95 156 3.49E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 SUPERFAMILY SSF49482 15 215 1.57E-55 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 PANTHER PTHR33711 1 214 3.2E-42 T 22-04-2016 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 Gene3D G3DSA:2.60.130.10 9 215 1.5E-56 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 Pfam PF00775 Dioxygenase 42 215 1.1E-28 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 75 103 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMK58_RS02800 1c62151a37e1b9724471b57ccfb55aa0 216 PANTHER PTHR33711:SF2 1 214 3.2E-42 T 22-04-2016 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 Pfam PF00463 Isocitrate lyase family 11 241 4.7E-52 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 SUPERFAMILY SSF51621 7 424 3.27E-144 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 13 241 8.7E-98 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 ProSitePatterns PS00161 Isocitrate lyase signature. 181 186 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 PANTHER PTHR21631 15 425 3.8E-152 T 22-04-2016 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 PIRSF PIRSF001362 2 425 2.8E-227 T 22-04-2016 AMK58_RS13275 44be622d64e124449323a47ca86c120d 425 Gene3D G3DSA:3.20.20.60 6 407 9.5E-153 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS08980 f2adb4d350d4437fbeede27cc39f2b26 137 Pfam PF14347 Domain of unknown function (DUF4399) 36 126 3.0E-39 T 22-04-2016 IPR025512 Domain of unknown function DUF4399 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 SUPERFAMILY SSF55931 104 468 2.06E-138 T 22-04-2016 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 PANTHER PTHR20852:SF15 161 469 4.8E-253 T 22-04-2016 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 PANTHER PTHR20852:SF15 3 139 4.8E-253 T 22-04-2016 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 SMART SM01230 103 379 1.3E-150 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 PANTHER PTHR20852 161 469 4.8E-253 T 22-04-2016 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 PANTHER PTHR20852 3 139 4.8E-253 T 22-04-2016 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 1.5E-141 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 1.0E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 Gene3D G3DSA:3.10.20.70 5 106 4.8E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 7.2E-205 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 Gene3D G3DSA:3.30.590.10 107 456 5.5E-138 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS06050 4b45c50e4e5b29b23ddb18000460717b 469 SUPERFAMILY SSF54368 5 102 2.88E-35 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 PANTHER PTHR24095 10 544 2.8E-242 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 531 5.3E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Gene3D G3DSA:3.40.50.980 21 133 1.0E-29 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Gene3D G3DSA:3.40.50.980 173 204 1.0E-29 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 SUPERFAMILY SSF56801 13 543 5.36E-141 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Pfam PF00501 AMP-binding enzyme 27 446 5.7E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Gene3D G3DSA:3.30.300.30 443 542 2.3E-31 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 PANTHER PTHR24095:SF169 10 544 2.8E-242 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Gene3D G3DSA:3.40.50.980 205 341 8.7E-32 T 22-04-2016 AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS08935 9ea7ca2690b5610f67a9cd9e3990dc3b 544 Gene3D G3DSA:2.30.38.10 371 440 3.1E-20 T 22-04-2016 AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 SMART SM00644 13 150 2.4E-39 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 PANTHER PTHR30417 7 232 5.6E-61 T 22-04-2016 AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 SUPERFAMILY SSF47090 186 231 1.65E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 Gene3D G3DSA:3.40.80.10 10 169 2.5E-57 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 SUPERFAMILY SSF55846 11 166 2.09E-55 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK58_RS03980 2da67963c3f603a67da0dace8d9bccd3 236 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 150 1.1E-24 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 SMART SM00387 441 562 1.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 SUPERFAMILY SSF55874 397 561 7.73E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 560 1.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 Gene3D G3DSA:3.30.565.10 401 560 1.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PANTHER PTHR24423 332 564 2.7E-79 T 22-04-2016 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PANTHER PTHR24423:SF438 332 564 2.7E-79 T 22-04-2016 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 519 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 559 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 SUPERFAMILY SSF47384 323 396 3.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01930 0ea89d104e868918c070363165a44cfc 567 Gene3D G3DSA:3.30.450.20 172 292 1.9E-7 T 22-04-2016 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 PANTHER PTHR11748:SF76 1 339 1.7E-149 T 22-04-2016 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 SUPERFAMILY SSF55103 122 332 6.38E-35 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 Pfam PF01565 FAD binding domain 1 109 7.8E-27 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 SUPERFAMILY SSF56176 1 149 2.62E-54 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 Pfam PF02913 FAD linked oxidases, C-terminal domain 149 333 2.3E-33 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 PANTHER PTHR11748 1 339 1.7E-149 T 22-04-2016 AMK58_RS18530 28104bcbba32d574b1e02e5a761ee23f 339 Gene3D G3DSA:3.30.465.10 28 149 4.7E-38 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SMART SM00316 618 688 5.7E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF00575 S1 RNA binding domain 617 688 7.4E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF00013 KH domain 554 611 1.5E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 691 30.636 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 PIRSF PIRSF005499 1 705 8.3E-292 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 PANTHER PTHR11252:SF0 1 697 0.0 T 22-04-2016 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Gene3D G3DSA:3.30.1370.10 550 615 3.2E-24 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF50249 618 701 6.71E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Gene3D G3DSA:3.30.230.70 314 539 7.3E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Gene3D G3DSA:3.30.230.70 3 225 1.1E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 318 1.7E-12 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF54791 552 638 5.31E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF54211 2 144 1.11E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 PANTHER PTHR11252 1 697 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Gene3D G3DSA:1.10.10.400 226 313 2.8E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF55666 448 544 3.75E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SMART SM00322 550 615 7.8E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF54211 291 486 6.58E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 SUPERFAMILY SSF55666 145 234 1.12E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 3.5E-25 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF01138 3' exoribonuclease family, domain 1 322 454 1.1E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Gene3D G3DSA:2.40.50.140 616 692 3.0E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 3.7E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS00780 1701da170c8fa60358d44775d4aa1b8d 706 Pfam PF03725 3' exoribonuclease family, domain 2 458 527 2.0E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK58_RS11210 a1f82293735ed1f3d01507d9c3549da5 260 PANTHER PTHR10434 17 230 2.0E-27 T 22-04-2016 AMK58_RS11210 a1f82293735ed1f3d01507d9c3549da5 260 SUPERFAMILY SSF69593 54 237 9.81E-30 T 22-04-2016 AMK58_RS11210 a1f82293735ed1f3d01507d9c3549da5 260 SMART SM00563 88 197 4.2E-24 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK58_RS11210 a1f82293735ed1f3d01507d9c3549da5 260 Pfam PF01553 Acyltransferase 74 194 1.4E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK58_RS11210 a1f82293735ed1f3d01507d9c3549da5 260 Gene3D G3DSA:3.40.1130.10 75 201 5.5E-7 T 22-04-2016 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 PANTHER PTHR22911:SF64 6 303 6.1E-44 T 22-04-2016 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 SUPERFAMILY SSF103481 46 138 3.4E-12 T 22-04-2016 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 PANTHER PTHR22911 6 303 6.1E-44 T 22-04-2016 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 SUPERFAMILY SSF103481 203 301 1.57E-10 T 22-04-2016 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 Pfam PF00892 EamA-like transporter family 4 136 3.9E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS13015 86ed1d8f81cdee2caf4ed69c9209bfe0 303 Pfam PF00892 EamA-like transporter family 163 301 1.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 PANTHER PTHR10849:SF20 4 162 6.3E-113 T 22-04-2016 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 29.192 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 1.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 PANTHER PTHR10849 4 162 6.3E-113 T 22-04-2016 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 3.0E-52 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 Gene3D G3DSA:1.10.1060.10 18 139 2.4E-23 T 22-04-2016 AMK58_RS06160 0ae9d64d308b24958a78c09462801b28 162 SUPERFAMILY SSF54862 36 146 1.55E-28 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Gene3D G3DSA:3.30.360.10 156 306 5.2E-57 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 SUPERFAMILY SSF51735 9 147 1.95E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 PANTHER PTHR21499:SF2 10 377 4.2E-127 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 PIRSF PIRSF000098 7 435 4.5E-159 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 PANTHER PTHR21499 10 377 4.2E-127 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Gene3D G3DSA:3.30.70.260 354 419 4.7E-5 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 SUPERFAMILY SSF55021 354 423 5.99E-10 T 22-04-2016 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Pfam PF01842 ACT domain 355 418 3.3E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 16 135 1.2E-17 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 190 212 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Pfam PF00742 Homoserine dehydrogenase 144 322 4.3E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 Gene3D G3DSA:3.40.50.720 9 155 5.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06780 0a0fa3624d8dcd6f10d32f7cc0bc6bbf 435 SUPERFAMILY SSF55347 144 309 9.15E-53 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496:SF62 6 221 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496:SF62 323 435 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496:SF62 238 307 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 SUPERFAMILY SSF56796 24 432 1.03E-95 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 190 218 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496 6 221 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496 323 435 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 PANTHER PTHR11496 238 307 2.0E-160 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 Pfam PF00465 Iron-containing alcohol dehydrogenase 24 423 7.9E-100 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 Gene3D G3DSA:1.20.1090.10 202 432 1.1E-55 T 22-04-2016 AMK58_RS05055 933aeb4d1f487d95360545b3ab1f632f 435 Gene3D G3DSA:3.40.50.1970 24 201 1.9E-48 T 22-04-2016 AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 PANTHER PTHR24423:SF439 3 132 2.2E-25 T 22-04-2016 AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 SMART SM00448 11 125 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 Gene3D G3DSA:3.40.50.2300 10 132 2.6E-21 T 22-04-2016 AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 SUPERFAMILY SSF52172 11 131 2.42E-21 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 PANTHER PTHR24423 3 132 2.2E-25 T 22-04-2016 AMK58_RS11530 5624a1a46aa75848bbb65772563946c7 137 Pfam PF00072 Response regulator receiver domain 13 124 1.8E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07130 19cce8a7954e75d631cf90bb90f0c9e0 274 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 261 1.2E-94 T 22-04-2016 IPR010247 N-formylglutamate deformylase AMK58_RS07130 19cce8a7954e75d631cf90bb90f0c9e0 274 SUPERFAMILY SSF53187 3 263 1.22E-78 T 22-04-2016 AMK58_RS07130 19cce8a7954e75d631cf90bb90f0c9e0 274 Gene3D G3DSA:3.40.630.40 2 261 1.1E-86 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS07130 19cce8a7954e75d631cf90bb90f0c9e0 274 Pfam PF05013 N-formylglutamate amidohydrolase 12 230 1.4E-65 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase AMK58_RS05290 bb5882109ab573efe5f9a56df0cb8718 133 PANTHER PTHR37164 5 133 2.7E-14 T 22-04-2016 AMK58_RS05290 bb5882109ab573efe5f9a56df0cb8718 133 Pfam PF01814 Hemerythrin HHE cation binding domain 18 102 2.4E-7 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS05290 bb5882109ab573efe5f9a56df0cb8718 133 Gene3D G3DSA:1.20.120.50 5 127 2.1E-23 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS05290 bb5882109ab573efe5f9a56df0cb8718 133 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 128 3.5E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS05290 bb5882109ab573efe5f9a56df0cb8718 133 SUPERFAMILY SSF47188 4 128 6.8E-25 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 13 318 2.2E-96 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 15 319 38.525 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 PIRSF PIRSF004486 9 320 4.1E-103 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 PANTHER PTHR11265 15 321 5.0E-146 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 Gene3D G3DSA:3.40.50.150 15 118 4.7E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 Gene3D G3DSA:3.40.50.150 224 320 4.7E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 Pfam PF01795 MraW methylase family 13 318 2.7E-102 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 SUPERFAMILY SSF53335 221 318 5.35E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 SUPERFAMILY SSF53335 14 121 5.35E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 PANTHER PTHR11265:SF0 15 321 5.0E-146 T 22-04-2016 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 Gene3D G3DSA:1.10.150.170 120 223 2.2E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03965 94aea2ca76c20d721f8fe7fdf0c92911 332 SUPERFAMILY SSF81799 122 221 2.88E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 7 61 2.1E-4 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 PANTHER PTHR23135 1 462 1.6E-141 T 22-04-2016 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 SUPERFAMILY SSF53244 316 457 2.2E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Gene3D G3DSA:3.90.190.20 318 454 2.9E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 SUPERFAMILY SSF53623 105 314 3.4E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 457 31.529 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 PANTHER PTHR23135:SF2 1 462 1.6E-141 T 22-04-2016 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 SUPERFAMILY SSF51984 7 95 2.22E-11 T 22-04-2016 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Gene3D G3DSA:3.40.50.720 9 95 9.3E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 113 136 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 373 7.1E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Pfam PF08245 Mur ligase middle domain 115 297 1.6E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 455 4.1E-112 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03935 60ad1143e0277b1422568d3c790e6ad4 467 Gene3D G3DSA:3.40.1190.10 100 316 2.7E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS10790 026d349d9031cda6ba94f2d465b86f1d 219 PANTHER PTHR18895 52 191 1.4E-24 T 22-04-2016 AMK58_RS10790 026d349d9031cda6ba94f2d465b86f1d 219 SUPERFAMILY SSF53335 44 183 1.81E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10790 026d349d9031cda6ba94f2d465b86f1d 219 PANTHER PTHR18895:SF3 52 191 1.4E-24 T 22-04-2016 AMK58_RS10790 026d349d9031cda6ba94f2d465b86f1d 219 Gene3D G3DSA:3.40.50.150 44 209 2.3E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10790 026d349d9031cda6ba94f2d465b86f1d 219 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 76 146 6.0E-9 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 324 2.0E-27 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Gene3D G3DSA:2.170.190.11 59 152 1.3E-26 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 264 297 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Pfam PF00994 Probable molybdopterin binding domain 191 326 2.9E-26 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 PANTHER PTHR10192:SF17 13 416 2.9E-143 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Gene3D G3DSA:2.40.340.10 343 414 1.6E-16 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Pfam PF03454 MoeA C-terminal region (domain IV) 342 413 1.1E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 SUPERFAMILY SSF63882 15 185 3.66E-53 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 PANTHER PTHR10192 13 416 2.9E-143 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 SUPERFAMILY SSF53218 188 332 3.66E-42 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Gene3D G3DSA:3.40.980.10 174 342 1.0E-60 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 18 178 2.9E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 SMART SM00852 191 328 2.3E-42 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Gene3D G3DSA:3.90.105.10 153 173 2.5E-20 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 Gene3D G3DSA:3.90.105.10 37 58 2.5E-20 T 22-04-2016 AMK58_RS07960 8d290243a3ecc146c5f456a04631e20d 417 SUPERFAMILY SSF63867 337 415 1.96E-19 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 SMART SM00382 209 377 1.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 PANTHER PTHR32039:SF7 1 384 1.4E-176 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 383 1.1E-130 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 Gene3D G3DSA:3.40.50.300 188 384 8.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 SUPERFAMILY SSF54211 8 169 9.48E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 Gene3D G3DSA:3.30.230.10 4 167 1.7E-21 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 PANTHER PTHR32039 1 384 1.4E-176 T 22-04-2016 AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 SUPERFAMILY SSF52540 187 384 1.32E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 139 2.5E-38 T 22-04-2016 AMK58_RS13360 eca9694e2cf774da174a545f6f699a92 384 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 384 1.2E-90 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 PANTHER PTHR10108:SF24 10 248 1.0E-113 T 22-04-2016 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 Gene3D G3DSA:3.40.50.150 24 247 1.4E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 246 4.7E-78 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 SUPERFAMILY SSF53335 16 245 2.3E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 155 169 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 PANTHER PTHR10108 10 248 1.0E-113 T 22-04-2016 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 247 5.2E-80 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS00875 1f2a783dafe760bf211dd2388bc997c8 248 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 247 36.459 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 SUPERFAMILY SSF69318 3 352 8.24E-33 T 22-04-2016 AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 Gene3D G3DSA:2.130.10.130 142 351 1.2E-8 T 22-04-2016 AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 Gene3D G3DSA:2.130.10.130 16 126 3.2E-8 T 22-04-2016 AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 Pfam PF07593 ASPIC and UnbV 394 461 2.8E-19 T 22-04-2016 IPR011519 ASPIC/UnbV AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 PANTHER PTHR16026 1 465 5.1E-118 T 22-04-2016 IPR027039 Cartilage acidic protein 1 AMK58_RS04435 09acdf5d824533bdc4cdb8c853082422 467 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 24 85 2.9E-8 T 22-04-2016 AMK58_RS13500 99791b60a039cac5bdd0bf61de3b6030 253 SUPERFAMILY SSF47090 185 250 2.25E-18 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS13500 99791b60a039cac5bdd0bf61de3b6030 253 SUPERFAMILY SSF55166 67 166 2.62E-12 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS13500 99791b60a039cac5bdd0bf61de3b6030 253 Pfam PF01471 Putative peptidoglycan binding domain 195 250 1.9E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS13500 99791b60a039cac5bdd0bf61de3b6030 253 Gene3D G3DSA:1.10.101.10 188 251 2.7E-21 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS13500 99791b60a039cac5bdd0bf61de3b6030 253 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 102 164 7.6E-13 T 22-04-2016 AMK58_RS12405 7777545b930ada3ba0391c7b9fa5cc51 196 SUPERFAMILY SSF47240 31 84 8.12E-8 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS12405 7777545b930ada3ba0391c7b9fa5cc51 196 Gene3D G3DSA:1.20.1260.10 35 84 2.0E-4 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS12405 7777545b930ada3ba0391c7b9fa5cc51 196 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 33 194 8.0E-29 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 241 1.7E-38 T 22-04-2016 AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 Gene3D G3DSA:3.40.50.720 3 242 3.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 SUPERFAMILY SSF51735 5 243 6.72E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PANTHER PTHR24322 11 140 9.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PANTHER PTHR24322 156 187 9.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PANTHER PTHR24322:SF211 11 140 9.4E-49 T 22-04-2016 AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PANTHER PTHR24322:SF211 156 187 9.4E-49 T 22-04-2016 AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07980 0e2e42706e3246178b81c8a09d90c99f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS16040 8742681f610469340ae786dbc969dd8e 75 Gene3D G3DSA:3.40.50.300 1 73 2.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS16040 8742681f610469340ae786dbc969dd8e 75 PANTHER PTHR24031:SF261 1 73 7.6E-28 T 22-04-2016 AMK58_RS16040 8742681f610469340ae786dbc969dd8e 75 SUPERFAMILY SSF52540 1 74 1.52E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS16040 8742681f610469340ae786dbc969dd8e 75 PANTHER PTHR24031 1 73 7.6E-28 T 22-04-2016 AMK58_RS16040 8742681f610469340ae786dbc969dd8e 75 Pfam PF00270 DEAD/DEAH box helicase 1 73 3.2E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 Pfam PF10442 FIST C domain 274 400 7.4E-16 T 22-04-2016 IPR019494 FIST, C-domain AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 Pfam PF08495 FIST N domain 68 268 3.4E-32 T 22-04-2016 IPR013702 FIST domain, N-terminal AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 PANTHER PTHR40252 27 417 9.2E-88 T 22-04-2016 AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 SMART SM01204 271 402 6.2E-33 T 22-04-2016 IPR019494 FIST, C-domain AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 SMART SM00897 65 270 1.4E-53 T 22-04-2016 IPR013702 FIST domain, N-terminal AMK58_RS03465 0c9871ea4302effecc19f33a8b7de65d 417 PANTHER PTHR40252:SF2 27 417 9.2E-88 T 22-04-2016 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 Pfam PF02502 Ribose/Galactose Isomerase 4 142 5.6E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 Gene3D G3DSA:3.40.1400.10 2 142 2.2E-65 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 PIRSF PIRSF005384 2 143 2.2E-58 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 142 4.7E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 SUPERFAMILY SSF89623 2 142 9.29E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 PANTHER PTHR30345 3 142 3.0E-66 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK58_RS08340 92e8b8b1aabf3922f667fe51e4a8942a 143 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 142 7.9E-49 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 Pfam PF08238 Sel1 repeat 273 315 5.1E-4 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 Pfam PF08238 Sel1 repeat 316 352 6.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 Gene3D G3DSA:1.25.40.10 244 356 1.1E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 SUPERFAMILY SSF81901 254 356 6.41E-16 T 22-04-2016 AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 PANTHER PTHR11102 263 359 8.3E-14 T 22-04-2016 AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 SMART SM00671 273 315 0.051 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS03245 8d3d0372e61c87f6c4abfae80edc36d9 361 SMART SM00671 316 352 9.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS00020 095e1d4232f1236fc0da005e9b2e8d09 123 PANTHER PTHR34039:SF1 17 109 1.4E-21 T 22-04-2016 AMK58_RS00020 095e1d4232f1236fc0da005e9b2e8d09 123 PANTHER PTHR34039 17 109 1.4E-21 T 22-04-2016 AMK58_RS00020 095e1d4232f1236fc0da005e9b2e8d09 123 Pfam PF02021 Uncharacterised protein family UPF0102 37 108 1.4E-15 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK58_RS00020 095e1d4232f1236fc0da005e9b2e8d09 123 Gene3D G3DSA:3.40.1350.10 37 109 3.9E-21 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMK58_RS00020 095e1d4232f1236fc0da005e9b2e8d09 123 SUPERFAMILY SSF52980 37 109 6.54E-14 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 Gene3D G3DSA:3.40.50.300 125 273 1.3E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 Gene3D G3DSA:3.40.50.300 2 88 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 Pfam PF00271 Helicase conserved C-terminal domain 136 256 1.6E-11 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 SUPERFAMILY SSF52540 3 86 1.23E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 PANTHER PTHR18934 1 293 4.0E-112 T 22-04-2016 AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 SMART SM00490 154 257 7.9E-13 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS17390 2844223986432f86e99d14af5ff6de74 295 SUPERFAMILY SSF52540 105 293 5.92E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 Pfam PF02540 NAD synthase 270 527 2.7E-71 T 22-04-2016 IPR022310 NAD/GMP synthase AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 Gene3D G3DSA:3.40.50.620 264 534 1.2E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 TIGRFAM TIGR00552 nadE: NAD+ synthetase 276 533 4.0E-59 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 PANTHER PTHR23090 2 550 1.8E-154 T 22-04-2016 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 Gene3D G3DSA:3.60.110.10 4 243 7.8E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 SUPERFAMILY SSF52402 259 535 1.7E-76 T 22-04-2016 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 Pfam PF00795 Carbon-nitrogen hydrolase 7 243 1.4E-29 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 SUPERFAMILY SSF56317 4 243 4.71E-62 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS11570 c7ac9d5f6a2adde00073775e940fae41 554 PIRSF PIRSF006630 2 553 8.2E-184 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 SUPERFAMILY SSF158682 11 192 5.62E-24 T 22-04-2016 IPR029024 TerB-like AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 Gene3D G3DSA:1.10.287.110 182 244 6.1E-12 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 SMART SM00271 178 243 3.7E-10 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 Pfam PF05099 Tellurite resistance protein TerB 45 165 6.6E-32 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 SUPERFAMILY SSF46565 174 244 5.08E-15 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 PRINTS PR00625 DnaJ domain signature 199 214 2.2E-5 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 PRINTS PR00625 DnaJ domain signature 223 243 2.2E-5 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 PRINTS PR00625 DnaJ domain signature 181 199 2.2E-5 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 Pfam PF00226 DnaJ domain 179 243 7.1E-9 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS03995 74e779d59ecbc177868c5a2dc90c6980 245 Gene3D G3DSA:1.10.3680.10 26 181 1.7E-25 T 22-04-2016 IPR029024 TerB-like AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 Gene3D G3DSA:3.40.50.620 1 250 2.4E-86 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 Pfam PF01012 Electron transfer flavoprotein domain 23 190 2.6E-48 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 PANTHER PTHR21294 1 264 6.6E-101 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 SMART SM00893 22 218 3.5E-58 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 PANTHER PTHR21294:SF0 1 264 6.6E-101 T 22-04-2016 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 162 182 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 SUPERFAMILY SSF52402 1 245 2.45E-73 T 22-04-2016 AMK58_RS04565 1a4ff4975b67dbf0136bcf491ee314da 283 PIRSF PIRSF000090 1 270 3.4E-93 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF54980 603 687 1.06E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SMART SM00889 480 598 1.2E-66 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 1.1E-69 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Pfam PF00679 Elongation factor G C-terminus 601 686 1.8E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Gene3D G3DSA:3.40.50.300 7 286 7.6E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF52540 6 281 2.78E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Pfam PF14492 Elongation Factor G, domain II 404 477 5.7E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Gene3D G3DSA:3.30.70.870 406 480 1.5E-37 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF54980 402 480 7.19E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115 6 177 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115 303 691 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115 255 283 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 691 108.109 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF50447 250 275 2.52E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF50447 305 402 2.52E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SMART SM00838 600 687 1.1E-51 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Gene3D G3DSA:3.30.70.240 600 685 3.0E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Gene3D G3DSA:3.30.230.10 484 599 1.1E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 4.6E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115:SF66 6 177 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115:SF66 303 691 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 PANTHER PTHR23115:SF66 255 283 0.0 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Pfam PF03764 Elongation factor G, domain IV 479 597 5.3E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Gene3D G3DSA:2.40.30.10 305 405 3.0E-38 T 22-04-2016 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 Pfam PF03144 Elongation factor Tu domain 2 324 391 4.9E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS10420 5415ac87c8f4c340d7201db0721f6cc0 692 SUPERFAMILY SSF54211 479 599 2.02E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:3.30.450.20 332 451 4.8E-17 T 22-04-2016 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF55785 199 326 1.68E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PANTHER PTHR24423 186 837 6.0E-172 T 22-04-2016 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00388 469 535 1.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:3.30.565.10 522 700 1.8E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 533 2.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:3.30.450.20 85 200 6.3E-10 T 22-04-2016 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF00072 Response regulator receiver domain 723 833 2.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF55785 328 452 6.46E-17 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF47384 462 533 1.61E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00091 340 406 1.1E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00091 214 282 0.0071 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00091 90 158 0.0022 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:1.10.287.130 464 521 5.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF00989 PAS fold 95 177 5.4E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:3.30.450.20 201 326 3.3E-15 T 22-04-2016 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF55785 96 204 1.41E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 1.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 1.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 1.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 656 1.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 697 1.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 211 335 5.4E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 338 460 7.9E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 94 207 1.1E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Gene3D G3DSA:3.40.50.2300 720 838 6.5E-32 T 22-04-2016 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00448 721 833 8.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF55874 525 699 4.58E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SUPERFAMILY SSF52172 721 838 3.7E-28 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF08448 PAS fold 346 455 8.4E-11 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 Pfam PF08448 PAS fold 221 329 5.1E-5 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 SMART SM00387 576 699 1.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10050 8077a64de89b8f4d42f8c554138d852f 841 PANTHER PTHR24423:SF379 186 837 6.0E-172 T 22-04-2016 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Pfam PF16189 Creatinase/Prolidase N-terminal domain 224 384 7.9E-38 T 22-04-2016 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Pfam PF01321 Creatinase/Prolidase N-terminal domain 83 215 5.5E-18 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Pfam PF16188 C-terminal region of peptidase_M24 611 674 6.6E-23 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 PANTHER PTHR10804 360 672 2.5E-223 T 22-04-2016 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Gene3D G3DSA:3.40.350.10 248 362 3.7E-5 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Gene3D G3DSA:3.40.350.10 80 208 1.0E-18 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 PANTHER PTHR10804:SF105 81 256 2.5E-223 T 22-04-2016 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 PANTHER PTHR10804:SF105 360 672 2.5E-223 T 22-04-2016 AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 SUPERFAMILY SSF53092 77 204 2.09E-12 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Gene3D G3DSA:3.90.230.10 378 637 4.6E-62 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 SUPERFAMILY SSF53092 240 360 4.71E-5 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 SUPERFAMILY SSF55920 381 636 1.24E-59 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 Pfam PF00557 Metallopeptidase family M24 388 600 2.6E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS03830 561f77f9a63a50301e3568fab56464d0 676 PANTHER PTHR10804 81 256 2.5E-223 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 Gene3D G3DSA:3.40.50.300 896 958 5.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 Gene3D G3DSA:3.40.50.300 706 810 5.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 PANTHER PTHR10887:SF284 524 676 5.5E-26 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 PANTHER PTHR10887:SF284 777 959 5.5E-26 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 SUPERFAMILY SSF52540 523 685 4.24E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 PANTHER PTHR10887 524 676 5.5E-26 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 PANTHER PTHR10887 777 959 5.5E-26 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 Pfam PF13604 AAA domain 537 711 9.4E-29 T 22-04-2016 AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 Gene3D G3DSA:3.40.50.300 521 695 9.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 SUPERFAMILY SSF52540 780 959 2.74E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 SUPERFAMILY SSF52540 651 711 2.74E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01800 c597eca234863e1f2964b1089740c99a 1124 Pfam PF13538 UvrD-like helicase C-terminal domain 908 953 7.6E-12 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 Pfam PF01636 Phosphotransferase enzyme family 23 260 2.1E-20 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 PANTHER PTHR33540:SF1 10 327 1.2E-23 T 22-04-2016 AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 Gene3D G3DSA:3.90.1200.10 93 327 1.6E-48 T 22-04-2016 AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 Gene3D G3DSA:3.30.200.20 3 91 8.3E-27 T 22-04-2016 AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 SUPERFAMILY SSF56112 6 318 3.4E-36 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS01575 2890fdfdd77d7ee23594941b5ed91f44 337 PANTHER PTHR33540 10 327 1.2E-23 T 22-04-2016 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 PANTHER PTHR19328:SF26 43 96 9.0E-168 T 22-04-2016 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 PANTHER PTHR19328:SF26 125 433 9.0E-168 T 22-04-2016 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 Gene3D G3DSA:2.120.10.30 60 433 2.2E-64 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 SUPERFAMILY SSF50952 121 429 4.18E-40 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 SUPERFAMILY SSF50952 60 93 4.18E-40 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 PANTHER PTHR19328 43 96 9.0E-168 T 22-04-2016 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 PANTHER PTHR19328 125 433 9.0E-168 T 22-04-2016 AMK58_RS00275 5380ad03a608d5fc91dadbe80e71a650 454 Pfam PF07995 Glucose / Sorbosone dehydrogenase 197 356 6.8E-10 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 SUPERFAMILY SSF53383 12 382 1.04E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 Gene3D G3DSA:3.40.640.10 48 253 2.1E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 Gene3D G3DSA:3.90.1150.10 254 381 2.4E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PANTHER PTHR11751 15 382 1.9E-173 T 22-04-2016 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 Pfam PF00155 Aminotransferase class I and II 35 379 7.8E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 1.2E-12 T 22-04-2016 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 95 115 1.2E-12 T 22-04-2016 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 1.2E-12 T 22-04-2016 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 117 138 1.2E-12 T 22-04-2016 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK58_RS10765 98a697dd551d631f5e44f99a1eda9e20 384 PANTHER PTHR11751:SF401 15 382 1.9E-173 T 22-04-2016 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 Gene3D G3DSA:3.40.50.7700 1 149 1.1E-67 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 PANTHER PTHR11609:SF5 1 148 4.3E-75 T 22-04-2016 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 29.151 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 Pfam PF00731 AIR carboxylase 1 143 2.9E-59 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 PIRSF PIRSF001338 1 153 2.3E-61 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 PANTHER PTHR11609 1 148 4.3E-75 T 22-04-2016 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 SUPERFAMILY SSF52255 1 151 2.62E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 149 2.4E-60 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS05125 4eb9743417a93f506e39c4fe0865d911 155 SMART SM01001 1 146 1.5E-91 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 Gene3D G3DSA:3.30.420.40 358 394 1.6E-14 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 Gene3D G3DSA:3.30.420.40 190 226 1.6E-14 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 Pfam PF00012 Hsp70 protein 4 231 2.8E-10 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 SUPERFAMILY SSF53067 2 175 2.1E-27 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 PANTHER PTHR19375:SF182 1 241 5.4E-72 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 PANTHER PTHR19375:SF182 292 416 5.4E-72 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 SUPERFAMILY SSF53067 180 248 4.62E-28 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 SUPERFAMILY SSF53067 298 420 4.62E-28 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 PANTHER PTHR19375 1 241 5.4E-72 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 PANTHER PTHR19375 292 416 5.4E-72 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 Gene3D G3DSA:3.30.420.40 106 189 9.6E-27 T 22-04-2016 AMK58_RS06045 81a7d67d9cb121e3a8aea430d4ff3a9f 426 Gene3D G3DSA:3.30.420.40 3 73 9.6E-27 T 22-04-2016 AMK58_RS11790 f961b8db213c2f280b6acff377dfbb69 182 Gene3D G3DSA:3.30.450.20 55 167 1.4E-19 T 22-04-2016 AMK58_RS11790 f961b8db213c2f280b6acff377dfbb69 182 Pfam PF17200 Single Cache domain 2 79 166 9.7E-16 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS11790 f961b8db213c2f280b6acff377dfbb69 182 SMART SM01049 50 131 1.6E-7 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 Gene3D G3DSA:2.30.42.10 308 384 2.6E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 57 263 8.0E-65 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 Pfam PF13180 PDZ domain 309 383 6.5E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 SMART SM00228 309 379 7.7E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 SUPERFAMILY SSF159501 39 295 6.8E-68 T 22-04-2016 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 PANTHER PTHR31620 56 259 3.6E-27 T 22-04-2016 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 PANTHER PTHR31620:SF8 56 259 3.6E-27 T 22-04-2016 AMK58_RS12165 7367a4e683073ac7d161bce46d9f011c 395 SUPERFAMILY SSF50156 308 385 4.47E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07020 9ae10c4266aba347eb9085c2113ade3a 192 Gene3D G3DSA:2.160.10.10 14 181 2.2E-44 T 22-04-2016 AMK58_RS07020 9ae10c4266aba347eb9085c2113ade3a 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 135 3.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS07020 9ae10c4266aba347eb9085c2113ade3a 192 SUPERFAMILY SSF51161 16 181 1.29E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS07020 9ae10c4266aba347eb9085c2113ade3a 192 PANTHER PTHR13061 13 185 9.7E-62 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SMART SM00838 578 668 1.4E-13 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Pfam PF14492 Elongation Factor G, domain II 383 454 1.0E-22 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Pfam PF00009 Elongation factor Tu GTP binding domain 12 273 1.9E-24 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 PANTHER PTHR23115 1 177 3.4E-209 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 PANTHER PTHR23115 251 672 3.4E-209 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SUPERFAMILY SSF54980 384 461 8.63E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Gene3D G3DSA:3.40.50.300 5 277 8.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Pfam PF00679 Elongation factor G C-terminus 578 667 8.0E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Gene3D G3DSA:3.30.230.10 463 575 4.0E-42 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Gene3D G3DSA:2.40.30.10 292 375 2.7E-18 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Gene3D G3DSA:3.30.70.870 384 459 1.1E-24 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SUPERFAMILY SSF50447 247 373 7.88E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SUPERFAMILY SSF54980 581 669 3.93E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SUPERFAMILY SSF52540 6 277 2.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Gene3D G3DSA:3.30.70.240 576 670 3.9E-17 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SMART SM00889 459 576 2.5E-55 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 PANTHER PTHR23115:SF98 1 177 3.4E-209 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 PANTHER PTHR23115:SF98 251 672 3.4E-209 T 22-04-2016 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 Pfam PF03764 Elongation factor G, domain IV 458 575 8.2E-38 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK58_RS03310 b3ad4b553da574c0863ff9bde777b606 679 SUPERFAMILY SSF54211 458 577 4.55E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 7 103 5.6E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 SUPERFAMILY SSF52833 5 106 3.22E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 Gene3D G3DSA:3.40.30.10 10 103 2.8E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 PANTHER PTHR10293 1 108 5.1E-65 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 PIRSF PIRSF005894 1 110 1.7E-50 T 22-04-2016 IPR014434 Monothiol glutaredoxin AMK58_RS11475 ee5c093aaf40c81ae1530f39a5b6edba 113 Pfam PF00462 Glutaredoxin 19 83 1.2E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Gene3D G3DSA:3.40.50.20 2 93 3.7E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Gene3D G3DSA:3.30.470.20 189 330 5.2E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 SMART SM01209 101 298 1.2E-130 T 22-04-2016 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 4.2E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 298 2.4E-79 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 SUPERFAMILY SSF51246 331 426 1.1E-30 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Gene3D G3DSA:3.90.600.10 333 425 1.3E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 424 7.0E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 426 42.116 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 PANTHER PTHR10520 1 426 6.6E-259 T 22-04-2016 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 Gene3D G3DSA:3.30.1490.20 119 188 1.3E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 426 7.8E-166 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 SMART SM01210 332 426 2.0E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 SUPERFAMILY SSF56059 102 325 3.54E-63 T 22-04-2016 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 292 299 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11325 a1c1c63e9ebb885ef36b43efd0c5f9d1 428 SUPERFAMILY SSF52440 1 101 8.2E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS11405 15fdfd51bb5d22fed63acdb924da1023 141 Pfam PF05099 Tellurite resistance protein TerB 17 122 3.6E-10 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK58_RS11405 15fdfd51bb5d22fed63acdb924da1023 141 Gene3D G3DSA:1.10.3680.10 9 135 5.9E-14 T 22-04-2016 IPR029024 TerB-like AMK58_RS11405 15fdfd51bb5d22fed63acdb924da1023 141 SUPERFAMILY SSF158682 2 124 2.62E-20 T 22-04-2016 IPR029024 TerB-like AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 PANTHER PTHR11472 219 897 4.0E-67 T 22-04-2016 AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 SMART SM00491 768 891 2.1E-6 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 Pfam PF13307 Helicase C-terminal domain 749 887 3.8E-14 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 SUPERFAMILY SSF52540 717 885 9.31E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 SUPERFAMILY SSF52540 387 459 9.31E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 SUPERFAMILY SSF52540 673 687 9.31E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 SUPERFAMILY SSF52540 243 294 9.31E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 Gene3D G3DSA:3.40.50.300 242 319 6.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 Gene3D G3DSA:3.40.50.300 397 444 6.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02610 7301e3ea51500d57a483f49488942493 922 PANTHER PTHR11472:SF37 219 897 4.0E-67 T 22-04-2016 AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 PANTHER PTHR10108:SF808 3 236 5.5E-55 T 22-04-2016 AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 Pfam PF13649 Methyltransferase domain 34 123 1.5E-17 T 22-04-2016 AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 Gene3D G3DSA:1.10.150.290 180 235 4.3E-25 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 SUPERFAMILY SSF53335 3 191 7.21E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 Gene3D G3DSA:3.40.50.150 4 153 2.1E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 PANTHER PTHR10108 3 236 5.5E-55 T 22-04-2016 AMK58_RS11855 d3a06f4d1d999fc6fef1b7e5485f2fa5 254 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 254 41.122 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK58_RS13765 146792f10b7d6267646b30dc842cdef8 294 Pfam PF08902 Domain of unknown function (DUF1848) 2 265 2.9E-86 T 22-04-2016 IPR014998 Protein of unknown function DUF1848 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Pfam PF12804 MobA-like NTP transferase domain 9 132 3.5E-24 T 22-04-2016 IPR025877 MobA-like NTP transferase AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 382 414 1.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 PANTHER PTHR22572 8 435 3.3E-164 T 22-04-2016 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Gene3D G3DSA:2.160.10.10 267 317 4.1E-6 T 22-04-2016 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Gene3D G3DSA:3.90.550.10 2 253 7.0E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 301 2.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 307 338 3.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Gene3D G3DSA:2.160.10.10 318 438 8.7E-33 T 22-04-2016 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 6 438 37.779 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 SUPERFAMILY SSF53448 7 254 4.06E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 439 4.8E-150 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 389 417 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 SUPERFAMILY SSF51161 263 424 4.2E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS08670 e09a10bf111cb84cbbe70b3bec279f2a 451 PANTHER PTHR22572:SF115 8 435 3.3E-164 T 22-04-2016 AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 Pfam PF02195 ParB-like nuclease domain 43 134 1.0E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 PANTHER PTHR33375 7 301 4.7E-92 T 22-04-2016 AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 SMART SM00470 42 134 8.6E-36 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 SUPERFAMILY SSF110849 43 136 8.63E-29 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 40 207 1.2E-61 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 Gene3D G3DSA:3.90.1530.10 39 140 4.0E-40 T 22-04-2016 AMK58_RS00350 052c86e8a09d998fadc20a38aa37f568 304 SUPERFAMILY SSF109709 126 231 1.36E-33 T 22-04-2016 AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 29 130 4.4E-16 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 SUPERFAMILY SSF140931 42 136 1.7E-8 T 22-04-2016 IPR003812 Fido domain AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 Pfam PF02661 Fic/DOC family 16 94 1.1E-11 T 22-04-2016 IPR003812 Fido domain AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 PANTHER PTHR39426:SF1 5 130 5.0E-22 T 22-04-2016 AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 PIRSF PIRSF018297 12 137 7.2E-35 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 Gene3D G3DSA:1.10.3290.10 58 122 1.6E-4 T 22-04-2016 IPR003812 Fido domain AMK58_RS00440 a39778c31099f2a8c0238ffb9223a60f 147 PANTHER PTHR39426 5 130 5.0E-22 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Gene3D G3DSA:3.30.70.240 404 491 2.5E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 SMART SM00838 401 492 0.0066 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 SUPERFAMILY SSF54980 402 496 3.41E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 SUPERFAMILY SSF52540 1 222 7.05E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 9.7E-51 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 3.3E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 3.0E-293 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 2.4E-52 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.0E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.0E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.0E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.0E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.0E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PANTHER PTHR23115 400 598 0.0 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PANTHER PTHR23115 1 376 0.0 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 SUPERFAMILY SSF54980 296 373 1.94E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.7E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Gene3D G3DSA:2.40.30.10 197 292 5.4E-21 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PANTHER PTHR23115:SF175 400 598 0.0 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 PANTHER PTHR23115:SF175 1 376 0.0 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Gene3D G3DSA:3.40.50.300 2 196 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 304.752 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Gene3D G3DSA:3.30.70.870 296 372 6.3E-26 T 22-04-2016 AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK58_RS01300 024ff320da8867a118f2e11fbd256918 600 Pfam PF00679 Elongation factor G C-terminus 402 487 1.1E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 Gene3D G3DSA:1.25.40.10 28 144 1.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 SUPERFAMILY SSF48452 101 251 6.77E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 Pfam PF07219 HemY protein N-terminus 1 70 6.9E-18 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 Gene3D G3DSA:1.25.40.10 145 265 2.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 Pfam PF14559 Tetratricopeptide repeat 101 152 1.0E-5 T 22-04-2016 AMK58_RS26915 8106aaea5549de459fdbf2bfe05c68c8 267 SUPERFAMILY SSF48452 25 141 1.06E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PANTHER PTHR22855 2 314 1.2E-109 T 22-04-2016 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 SUPERFAMILY SSF52096 4 314 2.34E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 Gene3D G3DSA:3.90.226.10 56 276 2.8E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PANTHER PTHR22855:SF42 2 314 1.2E-109 T 22-04-2016 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 6.2E-60 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 2.8E-39 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 1.7E-124 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS12495 c7c79a7e997c14144c89dc5e2b0fac40 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.4 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PRINTS PR00301 70kDa heat shock protein signature 322 338 1.6E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.6E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PRINTS PR00301 70kDa heat shock protein signature 120 140 1.6E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PRINTS PR00301 70kDa heat shock protein signature 188 198 1.6E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Gene3D G3DSA:3.90.640.10 216 302 1.1E-8 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Gene3D G3DSA:3.30.420.40 98 186 2.6E-29 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Gene3D G3DSA:3.30.420.40 4 65 2.6E-29 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 SUPERFAMILY SSF53067 177 368 2.74E-33 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Pfam PF00012 Hsp70 protein 4 68 1.1E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Pfam PF00012 Hsp70 protein 90 368 2.3E-36 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PANTHER PTHR19375:SF186 2 368 9.1E-51 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Gene3D G3DSA:3.30.420.40 187 215 6.6E-13 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 Gene3D G3DSA:3.30.420.40 307 346 6.6E-13 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 SUPERFAMILY SSF53067 4 163 1.39E-27 T 22-04-2016 AMK58_RS01795 432c7931c53c4b9f43a30a4aeda65d98 623 PANTHER PTHR19375 2 368 9.1E-51 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 73 191 1.5E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 Gene3D G3DSA:3.30.450.20 65 183 5.1E-15 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 Pfam PF13426 PAS domain 86 183 5.5E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 PANTHER PTHR24423 217 249 3.2E-13 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 PANTHER PTHR24423 270 296 3.2E-13 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 PANTHER PTHR24423 72 200 3.2E-13 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 PANTHER PTHR24423 7 36 3.2E-13 T 22-04-2016 AMK58_RS15700 bb2f5d597f006026aee3863e9856692d 305 SUPERFAMILY SSF55785 62 183 2.79E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 SUPERFAMILY SSF51735 1 256 2.09E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 3.7E-39 T 22-04-2016 AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PANTHER PTHR24322 153 184 1.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PANTHER PTHR24322 12 137 1.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 Gene3D G3DSA:3.40.50.720 3 255 1.6E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PANTHER PTHR24322:SF602 153 184 1.7E-42 T 22-04-2016 AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PANTHER PTHR24322:SF602 12 137 1.7E-42 T 22-04-2016 AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03185 6b8d5712106cc0b56b2bf0ee06125108 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.5E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 2.3E-15 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.3E-15 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 2.3E-15 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 SUPERFAMILY SSF69189 279 371 1.0E-20 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 255 2.8E-71 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 Gene3D G3DSA:2.60.410.10 279 369 4.0E-22 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 Gene3D G3DSA:3.40.710.10 31 277 3.1E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 PANTHER PTHR21581:SF3 1 384 9.4E-94 T 22-04-2016 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 369 3.1E-17 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 SUPERFAMILY SSF56601 12 279 5.91E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 PANTHER PTHR21581 1 384 9.4E-94 T 22-04-2016 AMK58_RS07785 ec613197404ba038602f5a827c0faeb3 388 SMART SM00936 279 369 3.8E-27 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SMART SM00471 502 649 7.6E-7 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 PIRSF PIRSF006288 42 933 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Pfam PF08335 GlnD PII-uridylyltransferase 225 363 3.3E-35 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 PANTHER PTHR13734:SF45 151 739 1.1E-97 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 67 928 9.4E-293 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SUPERFAMILY SSF55021 855 925 3.12E-12 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Gene3D G3DSA:3.30.70.260 855 925 3.3E-14 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Gene3D G3DSA:3.30.70.260 745 799 3.9E-8 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SUPERFAMILY SSF81301 27 219 2.44E-34 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SUPERFAMILY SSF81593 245 352 3.92E-7 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Gene3D G3DSA:3.30.460.10 117 211 3.4E-9 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 PANTHER PTHR13734 151 739 1.1E-97 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 52 933 292.929 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SUPERFAMILY SSF81891 408 649 2.55E-23 T 22-04-2016 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Pfam PF01966 HD domain 507 637 3.9E-10 T 22-04-2016 IPR006674 HD domain AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Pfam PF01909 Nucleotidyltransferase domain 117 153 1.5E-4 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 Gene3D G3DSA:1.10.3210.10 477 664 2.1E-26 T 22-04-2016 IPR006674 HD domain AMK58_RS00070 44373e003eb602404a656e8b8a32cc45 933 SUPERFAMILY SSF55021 744 799 4.16E-10 T 22-04-2016 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 SMART SM01382 124 252 1.5E-90 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.3E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 PIRSF PIRSF002158 4 275 5.6E-102 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 SUPERFAMILY SSF50249 2 125 1.51E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 SUPERFAMILY SSF50104 126 272 1.75E-61 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Gene3D G3DSA:2.40.50.140 1 114 2.5E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 SMART SM01383 42 118 1.3E-44 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 PANTHER PTHR13691:SF5 1 272 1.6E-137 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 6.2E-127 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.7E-31 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.454 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Gene3D G3DSA:2.30.30.30 118 195 7.5E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 PANTHER PTHR13691 1 272 1.6E-137 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10390 132eb14b4d997654c2cad40fa0c3121e 275 Gene3D G3DSA:4.10.950.10 196 272 2.0E-33 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 SUPERFAMILY SSF52540 143 316 2.23E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 PANTHER PTHR36153:SF1 19 659 1.3E-130 T 22-04-2016 AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 PANTHER PTHR36153 19 659 1.3E-130 T 22-04-2016 AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 Gene3D G3DSA:3.40.50.300 152 294 1.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 Pfam PF06761 Intracellular multiplication and human macrophage-killing 511 659 3.8E-30 T 22-04-2016 IPR009612 ImcF-related AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 Pfam PF14331 ImcF-related N-terminal domain 218 450 4.5E-75 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain AMK58_RS12955 4fbfcb6230855e133e47e9fb3e7ec426 674 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 50 659 2.0E-168 T 22-04-2016 IPR017731 Type VI secretion system, IcmF AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 Gene3D G3DSA:3.40.50.150 3 201 1.7E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 128 3.8E-7 T 22-04-2016 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 75 87 3.8E-7 T 22-04-2016 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 78 84 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 PANTHER PTHR30195:SF2 1 182 5.4E-27 T 22-04-2016 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 PANTHER PTHR30195 1 182 5.4E-27 T 22-04-2016 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 Pfam PF02384 N-6 DNA Methylase 1 217 1.7E-44 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMK58_RS20480 174a191611d2c7c6a8fbe1a85982d532 221 SUPERFAMILY SSF53335 1 221 4.91E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 17 262 4.8E-43 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 Gene3D G3DSA:3.40.830.10 10 262 1.3E-90 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 PANTHER PTHR30096 1 266 3.2E-101 T 22-04-2016 AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 SUPERFAMILY SSF53213 14 262 1.44E-84 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 PANTHER PTHR30096:SF0 1 266 3.2E-101 T 22-04-2016 AMK58_RS04370 54d3e3dc8876a73d6bd6c07194a28db7 266 PIRSF PIRSF006157 11 264 8.1E-87 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 AMK58_RS01015 186914a4014659723f8a63351765a081 245 SUPERFAMILY SSF46785 163 242 9.74E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01015 186914a4014659723f8a63351765a081 245 Pfam PF00027 Cyclic nucleotide-binding domain 51 133 1.9E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS01015 186914a4014659723f8a63351765a081 245 Gene3D G3DSA:1.10.10.10 168 243 8.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01015 186914a4014659723f8a63351765a081 245 ProSitePatterns PS00042 Crp-type HTH domain signature. 193 216 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMK58_RS01015 186914a4014659723f8a63351765a081 245 SMART SM00419 185 234 2.4E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS01015 186914a4014659723f8a63351765a081 245 Gene3D G3DSA:2.60.120.10 23 167 3.2E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS01015 186914a4014659723f8a63351765a081 245 SUPERFAMILY SSF51206 24 161 1.44E-34 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS01015 186914a4014659723f8a63351765a081 245 SMART SM00100 31 149 2.2E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS01015 186914a4014659723f8a63351765a081 245 PANTHER PTHR24567 6 243 1.2E-71 T 22-04-2016 AMK58_RS01015 186914a4014659723f8a63351765a081 245 PANTHER PTHR24567:SF28 6 243 1.2E-71 T 22-04-2016 AMK58_RS01015 186914a4014659723f8a63351765a081 245 Pfam PF13545 Crp-like helix-turn-helix domain 166 237 1.0E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS01015 186914a4014659723f8a63351765a081 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 191 207 2.5E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS01015 186914a4014659723f8a63351765a081 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 222 2.5E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS11620 8028f255410dbca50f6a939770800c15 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 293 3.0E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS11620 8028f255410dbca50f6a939770800c15 304 PANTHER PTHR11795:SF404 280 303 3.4E-111 T 22-04-2016 AMK58_RS11620 8028f255410dbca50f6a939770800c15 304 PANTHER PTHR11795:SF404 1 263 3.4E-111 T 22-04-2016 AMK58_RS11620 8028f255410dbca50f6a939770800c15 304 PANTHER PTHR11795 280 303 3.4E-111 T 22-04-2016 AMK58_RS11620 8028f255410dbca50f6a939770800c15 304 PANTHER PTHR11795 1 263 3.4E-111 T 22-04-2016 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PANTHER PTHR11817 5 470 4.1E-199 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Gene3D G3DSA:3.20.20.60 169 323 5.2E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Gene3D G3DSA:3.20.20.60 5 75 5.2E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 187 201 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 310 326 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 291 309 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 266 290 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 214 240 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 62 78 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 PRINTS PR01050 Pyruvate kinase family signature 241 265 7.5E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 468 5.5E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 1.6E-144 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Gene3D G3DSA:3.40.1380.20 324 467 3.7E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Gene3D G3DSA:2.40.33.10 76 168 9.6E-26 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 SUPERFAMILY SSF51621 157 340 5.23E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 SUPERFAMILY SSF51621 2 77 5.23E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 3.1E-109 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 SUPERFAMILY SSF50800 73 167 2.97E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMK58_RS06995 983d26f070977b368bd645878fccc8f5 487 SUPERFAMILY SSF52935 320 470 4.84E-36 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 164 1.5E-39 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 Pfam PF01782 RimM N-terminal domain 6 86 7.6E-19 T 22-04-2016 IPR002676 RimM protein GO:0006364 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 Gene3D G3DSA:2.30.30.240 96 164 5.4E-16 T 22-04-2016 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 Pfam PF05239 PRC-barrel domain 93 163 1.1E-7 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 SUPERFAMILY SSF50346 96 163 3.14E-15 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 PANTHER PTHR33692 1 193 1.3E-37 T 22-04-2016 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 Gene3D G3DSA:2.40.30.60 2 89 2.6E-21 T 22-04-2016 IPR002676 RimM protein GO:0006364 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 PANTHER PTHR33692:SF1 1 193 1.3E-37 T 22-04-2016 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 166 22.71 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK58_RS12250 90dab57d4b7c5f2c69021e56fa73f1f7 201 SUPERFAMILY SSF50447 5 89 2.83E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Pfam PF14559 Tetratricopeptide repeat 153 220 4.1E-10 T 22-04-2016 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Pfam PF14561 Tetratricopeptide repeat 227 316 8.4E-33 T 22-04-2016 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 SUPERFAMILY SSF48452 244 290 1.98E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 SUPERFAMILY SSF48452 143 208 1.98E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Gene3D G3DSA:1.25.40.10 229 316 1.7E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Gene3D G3DSA:3.40.30.10 19 130 7.2E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 PANTHER PTHR10438:SF282 27 131 1.4E-33 T 22-04-2016 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 PANTHER PTHR10438:SF282 258 279 1.4E-33 T 22-04-2016 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Gene3D G3DSA:1.25.40.10 144 228 4.3E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 SUPERFAMILY SSF52833 23 133 3.0E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 PANTHER PTHR10438 27 131 1.4E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 PANTHER PTHR10438 258 279 1.4E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK58_RS02185 5035eba16d0901d3fdb2ced5fa4e0a8c 317 Pfam PF00085 Thioredoxin 28 127 5.4E-23 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK58_RS10720 80f5ed69376f43f94d0b600940845de1 318 SUPERFAMILY SSF52266 198 292 2.9E-8 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS10720 80f5ed69376f43f94d0b600940845de1 318 SUPERFAMILY SSF52266 47 110 2.9E-8 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS10720 80f5ed69376f43f94d0b600940845de1 318 Gene3D G3DSA:3.40.50.1110 204 292 1.0E-5 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 PANTHER PTHR22911:SF66 1 298 8.3E-70 T 22-04-2016 AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 SUPERFAMILY SSF103481 194 292 4.71E-14 T 22-04-2016 AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 Pfam PF00892 EamA-like transporter family 160 289 1.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 Pfam PF00892 EamA-like transporter family 22 150 1.6E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 SUPERFAMILY SSF103481 53 153 1.14E-15 T 22-04-2016 AMK58_RS05625 bb7f7ce2971fb1c1aa71fe2187fe46f1 298 PANTHER PTHR22911 1 298 8.3E-70 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 SUPERFAMILY SSF53756 54 403 2.2E-12 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417 1 112 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417 191 418 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417 131 141 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417:SF2 1 112 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417:SF2 191 418 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 PANTHER PTHR23417:SF2 131 141 1.6E-88 T 22-04-2016 AMK58_RS10845 c49c348a7d529c640d3ef82581f53c80 427 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 209 5.3E-60 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 PANTHER PTHR32089 329 349 1.1E-20 T 22-04-2016 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 PANTHER PTHR32089 56 312 1.1E-20 T 22-04-2016 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 Gene3D G3DSA:1.10.287.950 81 290 2.6E-31 T 22-04-2016 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 SUPERFAMILY SSF58104 67 318 1.19E-32 T 22-04-2016 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 SMART SM00283 65 315 4.9E-5 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02375 5e94bfcd1054f06b478217c1a45b044b 388 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 143 309 9.9E-25 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 227 2.5E-100 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 Gene3D G3DSA:1.10.287.610 102 153 5.9E-21 T 22-04-2016 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 Pfam PF00318 Ribosomal protein S2 11 225 4.3E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 Gene3D G3DSA:3.40.50.10490 159 248 5.4E-65 T 22-04-2016 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 Gene3D G3DSA:3.40.50.10490 25 101 5.4E-65 T 22-04-2016 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 SUPERFAMILY SSF52313 8 237 1.83E-92 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 41.609 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PANTHER PTHR12534 6 260 1.8E-117 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.7E-40 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS06265 71935de3c95fe2db0fec968fd1b84f1b 264 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 Gene3D G3DSA:3.30.1330.30 39 118 3.3E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 SUPERFAMILY SSF55315 40 119 6.36E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 Pfam PF00588 SpoU rRNA Methylase family 138 278 4.2E-38 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 43 119 3.2E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 PANTHER PTHR12029 29 282 3.9E-62 T 22-04-2016 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 43 282 1.9E-59 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 SMART SM00967 43 122 6.7E-14 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 Gene3D G3DSA:3.40.1280.10 134 282 9.9E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS10500 bf4024b90e27fb756f9bde87e0726535 284 SUPERFAMILY SSF75217 111 282 4.32E-45 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS06710 cc4d9955ca6a113e9112b98ee2591417 172 SMART SM00881 20 114 1.8E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS06710 cc4d9955ca6a113e9112b98ee2591417 172 PANTHER PTHR33303 11 151 3.3E-56 T 22-04-2016 AMK58_RS06710 cc4d9955ca6a113e9112b98ee2591417 172 Pfam PF13380 CoA binding domain 24 140 1.4E-41 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS06710 cc4d9955ca6a113e9112b98ee2591417 172 SUPERFAMILY SSF51735 12 143 3.45E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06710 cc4d9955ca6a113e9112b98ee2591417 172 Gene3D G3DSA:3.40.50.720 12 145 7.6E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Pfam PF13414 TPR repeat 183 224 9.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Pfam PF13432 Tetratricopeptide repeat 120 174 1.6E-10 T 22-04-2016 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Pfam PF13432 Tetratricopeptide repeat 16 74 7.4E-9 T 22-04-2016 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SMART SM00028 40 73 0.0012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SMART SM00028 176 209 4.7E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SMART SM00028 142 175 0.016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SMART SM00028 74 107 0.095 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SMART SM00028 108 141 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SUPERFAMILY SSF53756 262 508 1.91E-23 T 22-04-2016 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Gene3D G3DSA:1.25.40.10 3 231 2.6E-57 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Pfam PF13374 Tetratricopeptide repeat 77 102 7.6E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 Gene3D G3DSA:3.40.50.2000 444 507 2.0E-10 T 22-04-2016 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 PANTHER PTHR23083 7 234 5.2E-50 T 22-04-2016 AMK58_RS04940 9808b3f7105f84b45c40fd8cdb3577ce 551 SUPERFAMILY SSF48452 7 228 3.03E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PANTHER PTHR30381:SF0 13 377 5.2E-157 T 22-04-2016 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PANTHER PTHR30381 13 377 5.2E-157 T 22-04-2016 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 199 217 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 34 49 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 173 191 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 116 133 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 94 113 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 133 151 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 69 84 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 49 64 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 PRINTS PR01010 Flagellar P-ring protein signature 263 275 3.0E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 Hamap MF_00416 Flagellar P-ring protein [flgI]. 13 377 37.077 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS10190 15a4bc767a9e520495447ff786314ad5 377 Pfam PF02119 Flagellar P-ring protein 34 376 1.1E-140 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK58_RS02780 92a2994dde513987b704226f8107e92d 435 PANTHER PTHR11785 9 376 3.3E-40 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK58_RS02780 92a2994dde513987b704226f8107e92d 435 Pfam PF13520 Amino acid permease 13 383 6.8E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK58_RS02780 92a2994dde513987b704226f8107e92d 435 PIRSF PIRSF006060 2 425 3.7E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 SUPERFAMILY SSF48300 3 60 8.24E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 PANTHER PTHR24089:SF272 6 121 1.7E-13 T 22-04-2016 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 24.688 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 3.3E-19 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 PANTHER PTHR24089 6 121 1.7E-13 T 22-04-2016 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.9E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 SUPERFAMILY SSF54736 53 124 1.24E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 4.5E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 Gene3D G3DSA:3.30.1390.10 52 124 2.7E-35 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 6.0E-23 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK58_RS10450 e0ce4d115c49bc27a4f3bf22e9402cda 124 Gene3D G3DSA:1.20.5.710 5 50 1.1E-16 T 22-04-2016 AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 PANTHER PTHR36303 2 270 1.7E-122 T 22-04-2016 AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 PANTHER PTHR36303:SF1 2 270 1.7E-122 T 22-04-2016 AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 SMART SM00854 2 200 0.0045 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 Gene3D G3DSA:3.60.21.30 1 268 2.2E-107 T 22-04-2016 AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 SUPERFAMILY SSF56300 1 260 1.0E-82 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 Pfam PF13277 YmdB-like protein 4 259 4.2E-98 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK58_RS09310 50c8f89cfa50cac6eb66558b63317cf7 273 PIRSF PIRSF004789 1 267 9.6E-84 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 PIRSF PIRSF039072 1 479 2.0E-285 T 22-04-2016 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 137 356 6.5E-62 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Gene3D G3DSA:1.10.1140.10 359 478 1.4E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 SMART SM00382 149 333 6.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 SUPERFAMILY SSF47917 359 474 2.54E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Gene3D G3DSA:3.40.50.300 84 358 2.3E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 PANTHER PTHR15184 1 478 0.0 T 22-04-2016 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 SUPERFAMILY SSF52540 84 361 8.07E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 SUPERFAMILY SSF50615 8 82 4.19E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 11 474 8.7E-255 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 14 80 1.3E-22 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 PANTHER PTHR15184:SF8 1 478 0.0 T 22-04-2016 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Hamap MF_01347 ATP synthase subunit beta [atpB]. 9 474 58.164 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11765 d32d969ea7f111484ac45488bf90e73e 479 Gene3D G3DSA:2.40.10.170 4 82 1.6E-34 T 22-04-2016 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 PIRSF PIRSF015601 6 243 1.1E-50 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 PANTHER PTHR30027 8 246 1.8E-53 T 22-04-2016 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 SUPERFAMILY SSF75217 80 243 3.31E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 PANTHER PTHR30027:SF3 8 246 1.8E-53 T 22-04-2016 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 241 2.3E-29 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 Gene3D G3DSA:3.40.1280.10 8 244 3.9E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 Pfam PF04452 RNA methyltransferase 23 238 6.1E-50 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS10775 b4ee3d7f0a64147403b4cfd8c034b8d5 264 SUPERFAMILY SSF88697 8 74 5.22E-14 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 Pfam PF00572 Ribosomal protein L13 14 138 4.9E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 Gene3D G3DSA:3.90.1180.10 5 142 2.8E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 5.1E-60 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 PIRSF PIRSF002181 1 154 2.6E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 28.257 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 SUPERFAMILY SSF52161 1 140 7.46E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK58_RS06725 b646f72578f5d4f89ed879e119c5515e 154 PANTHER PTHR11545 1 142 3.3E-68 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 PANTHER PTHR11002 10 230 1.1E-64 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 Gene3D G3DSA:3.40.1050.10 7 229 1.2E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 SMART SM00947 38 220 1.3E-67 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 SUPERFAMILY SSF53056 10 229 1.7E-56 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 95 115 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 Pfam PF00484 Carbonic anhydrase 45 215 5.5E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS05165 194b752b881a5c6f70a379b434ede03b 230 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Gene3D G3DSA:1.10.287.130 367 429 6.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Gene3D G3DSA:3.40.50.2300 30 145 7.7E-12 T 22-04-2016 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 589 9.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 SUPERFAMILY SSF52172 34 182 1.85E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 SMART SM00387 481 591 1.0E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 SUPERFAMILY SSF47384 357 437 1.16E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PANTHER PTHR24423 342 589 1.2E-61 T 22-04-2016 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PANTHER PTHR24423 187 222 1.2E-61 T 22-04-2016 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 PANTHER PTHR24423 53 64 1.2E-61 T 22-04-2016 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Gene3D G3DSA:3.30.565.10 438 590 6.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Pfam PF00072 Response regulator receiver domain 37 146 6.4E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Pfam PF11849 Domain of unknown function (DUF3369) 157 325 4.2E-42 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 Pfam PF00512 His Kinase A (phospho-acceptor) domain 371 437 1.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 SUPERFAMILY SSF55874 429 589 3.67E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09160 53d0b62bdf3c9c4f5e75dee00523a26c 591 SMART SM00388 370 437 1.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 Gene3D G3DSA:3.40.50.620 13 223 4.1E-81 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 PANTHER PTHR11933 10 373 4.6E-159 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 PANTHER PTHR11933:SF10 10 373 4.6E-159 T 22-04-2016 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 18 372 2.6E-100 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 Gene3D G3DSA:2.30.30.280 232 291 1.1E-20 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 17 373 39.801 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 Gene3D G3DSA:2.40.30.10 294 375 4.3E-22 T 22-04-2016 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 Pfam PF03054 tRNA methyl transferase 18 372 1.0E-117 T 22-04-2016 AMK58_RS04930 8c4e51b56142721ba0e663bd4d80f570 377 SUPERFAMILY SSF52402 16 259 9.7E-52 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 SUPERFAMILY SSF56024 281 303 1.84E-30 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 SUPERFAMILY SSF56024 21 247 1.84E-30 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 SMART SM00155 163 190 0.16 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 SMART SM00155 409 436 8.3E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Gene3D G3DSA:3.30.870.10 48 249 2.7E-28 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Gene3D G3DSA:3.30.870.10 316 450 3.2E-19 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Gene3D G3DSA:3.30.870.10 283 305 2.7E-28 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Pfam PF13091 PLD-like domain 320 450 3.9E-10 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 PANTHER PTHR12677 547 771 2.6E-21 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Pfam PF00614 Phospholipase D Active site motif 167 189 6.8E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 SUPERFAMILY SSF56024 313 450 1.88E-22 T 22-04-2016 AMK58_RS13225 0b539762f6c1d2972177f0a3355f933f 785 Pfam PF09335 SNARE associated Golgi protein 614 730 1.8E-20 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS11770 32791190a83c340840912303f28da517 296 Gene3D G3DSA:1.10.287.80 246 291 4.5E-30 T 22-04-2016 AMK58_RS11770 32791190a83c340840912303f28da517 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 296 33.568 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 PANTHER PTHR11693 1 296 4.6E-130 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 282 295 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site AMK58_RS11770 32791190a83c340840912303f28da517 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 296 1.1E-107 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 SUPERFAMILY SSF52943 2 296 3.92E-90 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain AMK58_RS11770 32791190a83c340840912303f28da517 296 Pfam PF00231 ATP synthase 3 295 2.1E-95 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 Gene3D G3DSA:1.10.287.80 19 60 2.0E-34 T 22-04-2016 AMK58_RS11770 32791190a83c340840912303f28da517 296 Gene3D G3DSA:1.10.287.80 211 245 2.0E-34 T 22-04-2016 AMK58_RS11770 32791190a83c340840912303f28da517 296 Gene3D G3DSA:3.40.1380.10 70 196 5.5E-37 T 22-04-2016 AMK58_RS11770 32791190a83c340840912303f28da517 296 PIRSF PIRSF039089 1 296 1.1E-107 T 22-04-2016 AMK58_RS11770 32791190a83c340840912303f28da517 296 PRINTS PR00126 ATP synthase gamma subunit signature 243 262 4.9E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 PRINTS PR00126 ATP synthase gamma subunit signature 274 295 4.9E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 4.9E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11770 32791190a83c340840912303f28da517 296 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 4.9E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 PANTHER PTHR11709 51 276 6.4E-62 T 22-04-2016 AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 Pfam PF07732 Multicopper oxidase 46 151 9.5E-36 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 SUPERFAMILY SSF49503 49 170 2.15E-36 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 Gene3D G3DSA:2.60.40.420 149 273 5.5E-25 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 Pfam PF00394 Multicopper oxidase 160 271 1.3E-11 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 PANTHER PTHR11709:SF33 51 276 6.4E-62 T 22-04-2016 AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 SUPERFAMILY SSF49503 152 310 2.27E-20 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS25790 84136119418f0bbd22b1d3766f6978f3 355 Gene3D G3DSA:2.60.40.420 19 148 7.5E-33 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 Pfam PF01625 Peptide methionine sulfoxide reductase 49 199 4.5E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 Gene3D G3DSA:3.30.1060.10 11 199 8.9E-82 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 PANTHER PTHR10173:SF36 3 203 2.0E-121 T 22-04-2016 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 PANTHER PTHR10173 3 203 2.0E-121 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 1.8E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 205 39.327 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK58_RS03415 ae8671c7b6d152f470be3da83e2c630d 210 SUPERFAMILY SSF55068 5 208 6.93E-84 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 SUPERFAMILY SSF50129 3 144 1.43E-39 T 22-04-2016 IPR011032 GroES-like AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 SMART SM00829 11 322 9.6E-31 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 SUPERFAMILY SSF51735 114 265 1.49E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 Gene3D G3DSA:3.40.50.720 147 256 3.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 Pfam PF00107 Zinc-binding dehydrogenase 151 256 1.1E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 92 8.8E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 PANTHER PTHR11695:SF578 16 324 5.0E-132 T 22-04-2016 AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 Gene3D G3DSA:3.90.180.10 3 146 9.8E-44 T 22-04-2016 IPR011032 GroES-like AMK58_RS00395 1eb2737a518a9cf82e6cce93ac45b2ed 324 PANTHER PTHR11695 16 324 5.0E-132 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 PANTHER PTHR11808 269 435 5.9E-220 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 PANTHER PTHR11808 3 239 5.9E-220 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 SUPERFAMILY SSF53383 8 431 6.95E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 PIRSF PIRSF001434 1 434 4.3E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 Gene3D G3DSA:3.90.1150.10 292 434 1.3E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 430 8.2E-179 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 PANTHER PTHR11808:SF12 269 435 5.9E-220 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 PANTHER PTHR11808:SF12 3 239 5.9E-220 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 Gene3D G3DSA:3.40.640.10 8 290 5.6E-115 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS10275 fb0d2e65b18e04b86024d652ec236b5f 436 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 430 3.7E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 PANTHER PTHR11772:SF10 2 393 2.0E-203 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 PANTHER PTHR11772:SF10 486 650 2.0E-203 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 SUPERFAMILY SSF56235 2 227 4.12E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 574 2.6E-151 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 Pfam PF00733 Asparagine synthase 251 638 1.6E-116 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 Pfam PF13537 Glutamine amidotransferase domain 50 171 6.1E-46 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 SUPERFAMILY SSF52402 494 634 2.79E-92 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 SUPERFAMILY SSF52402 241 391 2.79E-92 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 PIRSF PIRSF001589 1 655 3.2E-174 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 PANTHER PTHR11772 2 393 2.0E-203 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 PANTHER PTHR11772 486 650 2.0E-203 T 22-04-2016 AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 Gene3D G3DSA:3.40.50.620 242 395 3.5E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 Gene3D G3DSA:3.40.50.620 498 633 3.5E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS09220 885f06241e4cb1442e4ff874f821191d 655 Gene3D G3DSA:3.60.20.10 2 227 5.2E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 SUPERFAMILY SSF51445 201 640 1.49E-117 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 SUPERFAMILY SSF81296 158 214 2.66E-10 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 SMART SM00642 272 641 1.0E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 129 749 1.1E-294 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 SUPERFAMILY SSF81296 33 134 2.18E-15 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Gene3D G3DSA:2.60.40.1180 647 751 6.6E-42 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Pfam PF00128 Alpha amylase, catalytic domain 300 370 4.2E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 SUPERFAMILY SSF51011 647 752 1.95E-37 T 22-04-2016 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 145 228 1.1E-22 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 121 752 45.997 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 PANTHER PTHR10357 69 751 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 PIRSF PIRSF000463 26 754 1.8E-295 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 PANTHER PTHR10357:SF160 69 751 0.0 T 22-04-2016 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Gene3D G3DSA:2.60.40.10 133 241 9.8E-39 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Gene3D G3DSA:2.60.40.10 32 126 8.2E-13 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Gene3D G3DSA:3.20.20.80 267 635 7.8E-91 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08885 79027194729c4812c361586bc2bf5cc3 754 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 652 751 2.1E-26 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 AMK58_RS07690 95df6036556b1fb78bf8ee234f8e68de 213 Pfam PF00583 Acetyltransferase (GNAT) family 107 182 2.5E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS07690 95df6036556b1fb78bf8ee234f8e68de 213 Gene3D G3DSA:3.40.630.30 81 197 2.0E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07690 95df6036556b1fb78bf8ee234f8e68de 213 SUPERFAMILY SSF55729 65 192 2.16E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 Gene3D G3DSA:1.10.530.10 329 426 3.1E-36 T 22-04-2016 AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 SUPERFAMILY SSF53955 328 427 8.8E-34 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 PANTHER PTHR21666 298 423 5.6E-31 T 22-04-2016 AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 SUPERFAMILY SSF48435 3 308 2.22E-41 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 Gene3D G3DSA:1.25.20.10 3 221 2.8E-14 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMK58_RS21045 3d14832bdbbca4b2e0f4f3f236e36809 435 Pfam PF01464 Transglycosylase SLT domain 329 427 4.7E-26 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 Pfam PF00459 Inositol monophosphatase family 7 249 2.8E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PANTHER PTHR20854:SF4 1 278 2.5E-85 T 22-04-2016 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 Gene3D G3DSA:3.40.190.80 154 263 7.4E-33 T 22-04-2016 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 SUPERFAMILY SSF56655 6 261 4.19E-80 T 22-04-2016 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PANTHER PTHR20854 1 278 2.5E-85 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 Gene3D G3DSA:3.30.540.10 6 153 3.7E-53 T 22-04-2016 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 2.2E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 2.2E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 2.2E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 2.2E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS09395 7cb2addcbcbd20bcf76cb303a755d0ba 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.4E-56 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 SUPERFAMILY SSF51735 163 353 3.16E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 SMART SM00829 8 389 7.7E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 4.9E-10 T 22-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 153 4.5E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695 126 263 8.7E-147 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695 12 106 8.7E-147 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695 290 391 8.7E-147 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 Gene3D G3DSA:3.90.180.10 1 187 8.9E-50 T 22-04-2016 IPR011032 GroES-like AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 SUPERFAMILY SSF50129 1 186 6.09E-54 T 22-04-2016 IPR011032 GroES-like AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695:SF281 126 263 8.7E-147 T 22-04-2016 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695:SF281 12 106 8.7E-147 T 22-04-2016 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 PANTHER PTHR11695:SF281 290 391 8.7E-147 T 22-04-2016 AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 Gene3D G3DSA:3.40.50.720 188 333 9.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04125 42de71d56b4c7cd7d2cc3f78aea8883e 391 Pfam PF00107 Zinc-binding dehydrogenase 196 268 5.7E-12 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 PANTHER PTHR34108 13 249 2.6E-52 T 22-04-2016 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 Gene3D G3DSA:2.160.20.70 137 249 9.5E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 PANTHER PTHR34108:SF1 13 249 2.6E-52 T 22-04-2016 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 148 247 1.6E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 SUPERFAMILY SSF63848 146 249 3.27E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 14 248 6.3E-60 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 13 250 24.358 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 AMK58_RS04420 1f7bd9b8983d2f4ee3a351c4d9716195 250 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 14 105 4.2E-14 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Gene3D G3DSA:3.40.50.280 718 857 3.8E-47 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 PANTHER PTHR21091 4 304 3.1E-92 T 22-04-2016 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Pfam PF02574 Homocysteine S-methyltransferase 13 301 5.0E-64 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SUPERFAMILY SSF51717 342 611 2.09E-73 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 PIRSF PIRSF000381 1 1163 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Gene3D G3DSA:3.20.20.330 2 349 2.3E-101 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SMART SM01018 634 716 2.1E-42 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SUPERFAMILY SSF56507 888 1163 2.35E-90 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Gene3D G3DSA:3.20.20.20 350 610 6.6E-84 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Pfam PF00809 Pterin binding enzyme 346 579 9.7E-40 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 PANTHER PTHR21091:SF97 4 304 3.1E-92 T 22-04-2016 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Pfam PF02310 B12 binding domain 723 815 6.7E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SUPERFAMILY SSF82282 2 385 6.67E-102 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SUPERFAMILY SSF52242 717 847 2.09E-37 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Pfam PF02607 B12 binding domain 636 709 1.7E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Gene3D G3DSA:3.10.196.10 944 1163 3.4E-65 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 917 1163 1.8E-42 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 TIGRFAM TIGR02082 metH: methionine synthase 9 1163 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 SUPERFAMILY SSF47644 631 714 1.44E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK58_RS08800 6de23a634c4470ebc86429636bc700b5 1163 Gene3D G3DSA:1.10.1240.10 628 713 3.8E-32 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 SMART SM00487 162 379 1.1E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 PANTHER PTHR30195 56 566 6.6E-60 T 22-04-2016 AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 PANTHER PTHR30195:SF3 56 566 6.6E-60 T 22-04-2016 AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 32 113 1.1E-7 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Gene3D G3DSA:3.40.50.300 426 549 3.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Pfam PF04851 Type III restriction enzyme, res subunit 165 344 2.1E-41 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Pfam PF08463 EcoEI R protein C-terminal 657 811 5.3E-27 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 SUPERFAMILY SSF52540 150 383 3.08E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Gene3D G3DSA:3.40.50.300 291 351 4.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 Gene3D G3DSA:3.40.50.300 162 247 4.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 SUPERFAMILY SSF52540 418 550 1.74E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06805 500c8a41aab523668a67c6f6cdebfd8a 815 SUPERFAMILY SSF52540 300 341 1.74E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 SMART SM00490 230 333 7.9E-13 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 SUPERFAMILY SSF52540 181 439 6.41E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 Pfam PF08482 ATP-dependent helicase C-terminal 701 832 2.0E-54 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 Gene3D G3DSA:3.40.50.300 6 164 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 PIRSF PIRSF005496 1 846 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 SMART SM00487 4 189 9.6E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 PANTHER PTHR18934 729 738 6.8E-158 T 22-04-2016 AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 PANTHER PTHR18934 6 456 6.8E-158 T 22-04-2016 AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 845 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 Pfam PF00271 Helicase conserved C-terminal domain 212 332 1.1E-10 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 Pfam PF04408 Helicase associated domain (HA2) 394 474 7.9E-15 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 SUPERFAMILY SSF52540 16 162 4.75E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 SMART SM00847 393 484 2.3E-18 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 AMK58_RS03625 6005a5b2f0e4e713a9f927d65932b6e7 846 Gene3D G3DSA:3.40.50.300 201 349 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 SUPERFAMILY SSF52540 328 520 3.32E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 Gene3D G3DSA:3.40.50.300 10 256 2.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 Gene3D G3DSA:3.40.50.300 340 521 1.8E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 SMART SM00382 34 216 8.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 SMART SM00382 367 534 5.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 SUPERFAMILY SSF52540 10 219 2.44E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 Pfam PF00005 ABC transporter 36 172 9.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 Pfam PF00005 ABC transporter 359 488 2.7E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 PANTHER PTHR19211 9 528 1.2E-177 T 22-04-2016 AMK58_RS00530 424e46e4e4c6b44c22ecc0c5b3ac13f7 542 PANTHER PTHR19211:SF6 9 528 1.2E-177 T 22-04-2016 AMK58_RS05220 7cb1a9ed47e3ab4ed540f58c128f4804 160 Pfam PF04073 Aminoacyl-tRNA editing domain 30 147 2.5E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS05220 7cb1a9ed47e3ab4ed540f58c128f4804 160 SUPERFAMILY SSF55826 9 154 2.09E-38 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS05220 7cb1a9ed47e3ab4ed540f58c128f4804 160 PANTHER PTHR30411 1 160 4.9E-27 T 22-04-2016 AMK58_RS05220 7cb1a9ed47e3ab4ed540f58c128f4804 160 Gene3D G3DSA:3.90.960.10 6 158 3.5E-47 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SUPERFAMILY SSF46565 1 113 3.01E-36 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Pfam PF00226 DnaJ domain 5 67 1.1E-28 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Pfam PF01556 DnaJ C terminal domain 125 338 5.9E-43 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.713 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Gene3D G3DSA:2.60.260.20 260 338 8.7E-24 T 22-04-2016 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SUPERFAMILY SSF49493 122 156 6.67E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SUPERFAMILY SSF49493 217 261 6.67E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PANTHER PTHR24078:SF231 1 352 4.6E-151 T 22-04-2016 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Pfam PF00684 DnaJ central domain 151 211 2.0E-13 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Gene3D G3DSA:1.10.287.110 1 108 2.2E-37 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Gene3D G3DSA:2.60.260.20 113 144 7.3E-22 T 22-04-2016 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Gene3D G3DSA:2.60.260.20 215 257 7.3E-22 T 22-04-2016 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SUPERFAMILY SSF57938 138 215 1.15E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SUPERFAMILY SSF49493 263 349 7.19E-24 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 5.8E-135 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 SMART SM00271 4 62 6.5E-32 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PANTHER PTHR24078 1 352 4.6E-151 T 22-04-2016 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 Gene3D G3DSA:2.10.230.10 145 214 1.3E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PRINTS PR00625 DnaJ domain signature 7 25 2.1E-32 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PRINTS PR00625 DnaJ domain signature 42 62 2.1E-32 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PRINTS PR00625 DnaJ domain signature 25 40 2.1E-32 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS13745 6ee39c6be42680a891916f7564ee463d 380 PRINTS PR00625 DnaJ domain signature 62 81 2.1E-32 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS11320 8ecd8267b40000ef711bda20766c5280 92 PANTHER PTHR33571 7 90 2.7E-26 T 22-04-2016 AMK58_RS11320 8ecd8267b40000ef711bda20766c5280 92 Gene3D G3DSA:3.30.460.10 8 90 1.4E-23 T 22-04-2016 AMK58_RS11320 8ecd8267b40000ef711bda20766c5280 92 SUPERFAMILY SSF81301 8 90 3.27E-19 T 22-04-2016 AMK58_RS11320 8ecd8267b40000ef711bda20766c5280 92 Pfam PF01909 Nucleotidyltransferase domain 11 89 5.1E-12 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 PANTHER PTHR21366:SF9 1 133 5.1E-71 T 22-04-2016 AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 1.8E-23 T 22-04-2016 AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 Gene3D G3DSA:3.10.180.10 1 133 4.7E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 SUPERFAMILY SSF54593 1 133 1.51E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 1.1E-48 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 AMK58_RS06205 903b5be722ef41c0da70e7cc909cccb5 134 PANTHER PTHR21366 1 133 5.1E-71 T 22-04-2016 AMK58_RS00580 a39dd28b8654dd7b2accd151f7748642 262 Pfam PF00950 ABC 3 transport family 1 257 4.0E-75 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK58_RS00580 a39dd28b8654dd7b2accd151f7748642 262 Gene3D G3DSA:1.10.3470.10 41 241 1.5E-7 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK58_RS00580 a39dd28b8654dd7b2accd151f7748642 262 PANTHER PTHR30477 3 262 3.0E-77 T 22-04-2016 AMK58_RS00580 a39dd28b8654dd7b2accd151f7748642 262 SUPERFAMILY SSF81345 3 255 2.09E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK58_RS00580 a39dd28b8654dd7b2accd151f7748642 262 PANTHER PTHR30477:SF0 3 262 3.0E-77 T 22-04-2016 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 46 485 7.3E-202 T 22-04-2016 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 SUPERFAMILY SSF102114 62 277 7.32E-34 T 22-04-2016 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 Pfam PF04055 Radical SAM superfamily 74 253 7.4E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 Gene3D G3DSA:3.30.420.130 381 491 7.7E-35 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 74 85 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 PANTHER PTHR11228 54 433 1.3E-111 T 22-04-2016 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 PANTHER PTHR11228:SF18 54 433 1.3E-111 T 22-04-2016 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 Gene3D G3DSA:3.20.20.70 64 329 1.2E-40 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 392 481 1.1E-21 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS04750 7b1fa4f1382f2cce65ae9f539ef33f37 519 SUPERFAMILY SSF53146 381 492 1.44E-31 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 Gene3D G3DSA:1.20.5.810 17 65 8.1E-21 T 22-04-2016 AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 PANTHER PTHR35446 5 190 2.4E-64 T 22-04-2016 AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 SUPERFAMILY SSF69118 3 187 1.09E-56 T 22-04-2016 IPR029032 AhpD-like AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 104 8.3E-10 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 PANTHER PTHR35446:SF2 5 190 2.4E-64 T 22-04-2016 AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 Gene3D G3DSA:1.20.1290.10 66 186 1.1E-33 T 22-04-2016 IPR029032 AhpD-like AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 9 183 1.3E-65 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related AMK58_RS09695 072099cde348080a78ff2330f19ac0b5 190 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 65 113 5.9E-14 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PANTHER PTHR30070:SF1 1 221 8.0E-66 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PANTHER PTHR30070 1 221 8.0E-66 T 22-04-2016 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 Pfam PF03379 CcmB protein 5 217 3.7E-83 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PIRSF PIRSF002764 1 221 3.1E-82 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 2.3E-84 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01545 2106d1f089ed68708afedbd9272637ac 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 9.6E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01810 dc55bb6e0d3b0d8e24bb7a05374c4f2f 367 Pfam PF06114 Domain of unknown function (DUF955) 220 306 2.3E-4 T 22-04-2016 IPR010359 HTH domain, IrrE-type AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 SUPERFAMILY SSF56519 50 242 1.96E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 597 2.6E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 PANTHER PTHR30627:SF2 1 597 1.9E-195 T 22-04-2016 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 228 3.5E-41 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 Gene3D G3DSA:3.40.710.10 242 600 3.1E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 SUPERFAMILY SSF56601 243 598 2.73E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 Gene3D G3DSA:3.90.1310.10 124 241 1.7E-32 T 22-04-2016 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 PANTHER PTHR30627 1 597 1.9E-195 T 22-04-2016 AMK58_RS05560 d387807ca16909c6fd1b30b762ed4cd4 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 13 599 4.8E-217 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 AMK58_RS12930 31f6f87b7a38efd0412ba3f6a1580479 427 PIRSF PIRSF006066 1 427 8.1E-128 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMK58_RS12930 31f6f87b7a38efd0412ba3f6a1580479 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 2.4E-113 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMK58_RS12930 31f6f87b7a38efd0412ba3f6a1580479 427 PANTHER PTHR33362:SF2 1 425 2.3E-107 T 22-04-2016 AMK58_RS12930 31f6f87b7a38efd0412ba3f6a1580479 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.6E-96 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMK58_RS12930 31f6f87b7a38efd0412ba3f6a1580479 427 PANTHER PTHR33362 1 425 2.3E-107 T 22-04-2016 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 PANTHER PTHR22911:SF6 3 282 3.4E-44 T 22-04-2016 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 SUPERFAMILY SSF103481 54 140 2.75E-9 T 22-04-2016 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 Pfam PF00892 EamA-like transporter family 3 136 1.2E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 Pfam PF00892 EamA-like transporter family 145 274 9.8E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 SUPERFAMILY SSF103481 185 279 2.75E-11 T 22-04-2016 AMK58_RS07685 3df2cfd596eac29f81637168045cb049 317 PANTHER PTHR22911 3 282 3.4E-44 T 22-04-2016 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 PANTHER PTHR22769:SF35 21 147 7.8E-33 T 22-04-2016 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 PANTHER PTHR22769 21 147 7.8E-33 T 22-04-2016 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 Gene3D G3DSA:3.90.79.10 21 145 6.4E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 PRINTS PR00502 NUDIX hydrolase family signature 48 62 3.3E-9 T 22-04-2016 IPR020476 NUDIX hydrolase AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 PRINTS PR00502 NUDIX hydrolase family signature 62 77 3.3E-9 T 22-04-2016 IPR020476 NUDIX hydrolase AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 SUPERFAMILY SSF55811 16 144 2.98E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 Pfam PF00293 NUDIX domain 21 136 3.9E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS12900 7023cdc48a7cdec97da0686cbbc39bae 147 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 SUPERFAMILY SSF52540 1 88 4.54E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 Gene3D G3DSA:3.40.50.300 1 87 2.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 PANTHER PTHR24220:SF574 1 122 2.1E-79 T 22-04-2016 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 SMART SM00382 164 270 3.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 Pfam PF00005 ABC transporter 156 274 4.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 60 100 3.7E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 SUPERFAMILY SSF52540 127 274 8.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 PANTHER PTHR24220:SF574 155 268 2.1E-79 T 22-04-2016 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 Gene3D G3DSA:3.40.50.300 125 273 3.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 PANTHER PTHR24220 155 268 2.1E-79 T 22-04-2016 AMK58_RS25125 a6c6da6900d2e11aa05c77f131da0abe 276 PANTHER PTHR24220 1 122 2.1E-79 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 PANTHER PTHR30537 1 295 6.0E-97 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 PANTHER PTHR30537:SF1 1 295 6.0E-97 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 Pfam PF03466 LysR substrate binding domain 89 295 6.3E-37 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 SUPERFAMILY SSF53850 91 297 3.44E-38 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 Gene3D G3DSA:3.40.190.10 179 262 6.2E-17 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 SUPERFAMILY SSF46785 6 88 1.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 Gene3D G3DSA:3.40.190.10 94 178 2.7E-14 T 22-04-2016 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS04975 a75375189c24fbf19bf65559eecade4d 306 Gene3D G3DSA:1.10.10.10 6 87 1.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 SMART SM00271 2 60 9.8E-28 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PANTHER PTHR24078:SF190 93 319 5.3E-69 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PANTHER PTHR24078:SF190 2 69 5.3E-69 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 Pfam PF00226 DnaJ domain 3 65 3.7E-24 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 SUPERFAMILY SSF49493 215 293 2.09E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PRINTS PR00625 DnaJ domain signature 40 60 2.6E-19 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PRINTS PR00625 DnaJ domain signature 23 38 2.6E-19 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PRINTS PR00625 DnaJ domain signature 5 23 2.6E-19 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 Gene3D G3DSA:2.60.260.20 213 291 1.4E-21 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 Gene3D G3DSA:2.60.260.20 139 211 7.0E-17 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PANTHER PTHR24078 93 319 5.3E-69 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 PANTHER PTHR24078 2 69 5.3E-69 T 22-04-2016 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 SUPERFAMILY SSF49493 139 219 6.28E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 SUPERFAMILY SSF46565 1 89 4.32E-28 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 Pfam PF01556 DnaJ C terminal domain 145 290 4.4E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal AMK58_RS09120 4fcc52d826ebaa26430a588794c155b1 319 Gene3D G3DSA:1.10.287.110 1 120 1.9E-28 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 SMART SM01008 28 135 3.2E-46 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 SUPERFAMILY SSF54665 12 136 3.4E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 14 771 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 614 773 1.1E-76 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 355 447 1.1E-76 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 136 170 1.3E-24 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 279 354 1.3E-24 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 PANTHER PTHR11908:SF66 14 774 0.0 T 22-04-2016 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 448 604 1.5E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 699 3.5E-198 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 SUPERFAMILY SSF56003 135 770 3.4E-198 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 PANTHER PTHR11908 14 774 0.0 T 22-04-2016 AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 28 135 3.1E-26 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.90.1170.50 14 135 2.1E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS07065 454a590f06065afecfdb39020015bf53 779 Gene3D G3DSA:3.30.365.10 171 277 2.1E-33 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 SUPERFAMILY SSF103039 78 260 6.54E-11 T 22-04-2016 IPR028976 CheC-like domain AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PRINTS PR00955 Flagellar motor switch protein FliM signature 118 134 3.9E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PRINTS PR00955 Flagellar motor switch protein FliM signature 39 52 3.9E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PRINTS PR00955 Flagellar motor switch protein FliM signature 242 260 3.9E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PRINTS PR00955 Flagellar motor switch protein FliM signature 143 162 3.9E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PIRSF PIRSF002888 38 359 2.2E-91 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PANTHER PTHR30034 38 359 1.8E-94 T 22-04-2016 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 283 350 7.6E-18 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) AMK58_RS10145 3e227d132970449585e2628a79074c77 360 SUPERFAMILY SSF101801 280 355 1.02E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) AMK58_RS10145 3e227d132970449585e2628a79074c77 360 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 40 352 8.3E-91 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 PANTHER PTHR30034:SF0 38 359 1.8E-94 T 22-04-2016 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 Gene3D G3DSA:2.30.330.10 276 357 4.5E-10 T 22-04-2016 AMK58_RS10145 3e227d132970449585e2628a79074c77 360 Pfam PF02154 Flagellar motor switch protein FliM 70 260 8.1E-66 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 Gene3D G3DSA:1.10.1740.10 1 52 7.4E-17 T 22-04-2016 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 Gene3D G3DSA:1.10.10.10 77 137 8.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 Pfam PF04542 Sigma-70 region 2 1 52 3.1E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 SUPERFAMILY SSF88659 75 136 1.46E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 PANTHER PTHR30173:SF6 1 144 9.9E-33 T 22-04-2016 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 Pfam PF08281 Sigma-70, region 4 79 131 1.1E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 PANTHER PTHR30173 1 144 9.9E-33 T 22-04-2016 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 134 3.8E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09575 6b91665759963a9efd037323944dddd8 144 SUPERFAMILY SSF88946 1 57 4.32E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09955 e0996492bb180af39c00d1dac38f21f7 127 Pfam PF07750 GcrA cell cycle regulator 1 54 4.3E-22 T 22-04-2016 IPR011681 GcrA cell cycle regulator AMK58_RS09955 e0996492bb180af39c00d1dac38f21f7 127 Pfam PF07750 GcrA cell cycle regulator 55 112 1.8E-21 T 22-04-2016 IPR011681 GcrA cell cycle regulator AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 SUPERFAMILY SSF102114 117 325 1.31E-14 T 22-04-2016 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 PIRSF PIRSF006004 15 381 1.7E-143 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 PANTHER PTHR30544 20 363 4.5E-169 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 18 365 9.6E-125 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 Gene3D G3DSA:3.20.20.70 120 328 2.1E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 Pfam PF04055 Radical SAM superfamily 124 294 1.0E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 20 367 73.233 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS01360 56e63d24a14edebc4df360a2837a206b 389 PANTHER PTHR30544:SF5 20 363 4.5E-169 T 22-04-2016 AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 PANTHER PTHR22683:SF41 94 680 1.1E-231 T 22-04-2016 AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 SMART SM00382 334 535 8.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 SUPERFAMILY SSF46785 616 681 3.17E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 PANTHER PTHR22683 94 680 1.1E-231 T 22-04-2016 AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 Pfam PF09397 Ftsk gamma domain 618 678 1.9E-25 T 22-04-2016 IPR018541 FtsK gamma domain AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 Gene3D G3DSA:3.40.50.300 276 579 3.2E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 SUPERFAMILY SSF52540 286 585 1.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 Pfam PF01580 FtsK/SpoIIIE family 299 514 4.2E-66 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK58_RS03395 9f667f8e360530d01fd940ff00753972 690 SMART SM00843 616 681 3.4E-34 T 22-04-2016 IPR018541 FtsK gamma domain AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 PANTHER PTHR38340 3 111 3.4E-12 T 22-04-2016 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 Gene3D G3DSA:2.150.10.10 31 196 1.2E-28 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 PRINTS PR00313 NodO calcium binding signature 76 84 2.1E-12 T 22-04-2016 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 PRINTS PR00313 NodO calcium binding signature 103 112 2.1E-12 T 22-04-2016 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 PRINTS PR00313 NodO calcium binding signature 67 75 2.1E-12 T 22-04-2016 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 PRINTS PR00313 NodO calcium binding signature 46 57 2.1E-12 T 22-04-2016 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 SUPERFAMILY SSF51120 30 199 3.66E-28 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 90 108 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 94 109 1.5E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 31 42 0.24 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 66 83 0.0012 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS02285 84988f06a749c8c11f8185cbf2692b1c 209 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 49 65 5.4E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 Pfam PF00106 short chain dehydrogenase 9 186 5.4E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 SUPERFAMILY SSF51735 5 240 6.57E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 Gene3D G3DSA:3.40.50.720 10 240 4.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PANTHER PTHR24322 12 138 1.4E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PANTHER PTHR24322 154 185 1.4E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS01660 a8d7acfb28608709b210649b33092764 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 618 41.857 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 Gene3D G3DSA:3.50.50.60 4 217 7.4E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 Pfam PF01134 Glucose inhibited division protein A 5 393 6.1E-166 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 Pfam PF13932 GidA associated domain 399 609 1.4E-63 T 22-04-2016 IPR026904 GidA associated domain 3 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 22-04-2016 IPR020595 MnmG-related, conserved site AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 PANTHER PTHR11806:SF0 2 616 0.0 T 22-04-2016 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 PANTHER PTHR11806 2 616 0.0 T 22-04-2016 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 615 3.5E-253 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 SUPERFAMILY SSF51905 2 63 1.59E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 SUPERFAMILY SSF51905 94 258 1.59E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 22-04-2016 IPR020595 MnmG-related, conserved site AMK58_RS00365 deaa09beed84f5dddfd9814d369156eb 622 SMART SM01228 540 611 2.0E-36 T 22-04-2016 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 Gene3D G3DSA:1.10.10.10 161 227 9.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 Gene3D G3DSA:3.40.50.2300 20 144 1.6E-20 T 22-04-2016 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 ProSitePatterns PS00622 LuxR-type HTH domain signature. 183 210 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 SUPERFAMILY SSF52172 20 142 5.83E-20 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 Pfam PF00072 Response regulator receiver domain 22 133 2.2E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 SMART SM00421 166 223 2.7E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 PANTHER PTHR26402 19 227 3.6E-38 T 22-04-2016 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 183 8.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 211 8.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 199 8.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 223 7.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 SUPERFAMILY SSF46894 160 229 1.12E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 SMART SM00448 19 133 3.3E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07055 b336b08f8869b426f482a55f5a9cc7fd 233 PANTHER PTHR26402:SF151 19 227 3.6E-38 T 22-04-2016 AMK58_RS10985 b629eafd1fa1195851a3fd4ceb4e433a 201 Pfam PF11233 Protein of unknown function (DUF3035) 29 180 1.7E-50 T 22-04-2016 IPR021395 Protein of unknown function DUF3035 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 1 438 1.9E-193 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 423 2.8E-149 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 SUPERFAMILY SSF52418 71 332 6.54E-87 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Gene3D G3DSA:1.20.970.10 1 67 4.5E-28 T 22-04-2016 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 4.5E-22 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Gene3D G3DSA:3.90.1170.30 337 432 6.1E-27 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Gene3D G3DSA:3.40.1030.10 72 336 1.2E-105 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 349 423 3.4E-16 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 SUPERFAMILY SSF54680 336 438 1.83E-24 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 SUPERFAMILY SSF47648 2 69 6.67E-22 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 PANTHER PTHR10515 1 440 4.6E-183 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 SMART SM00941 349 424 1.2E-17 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 PANTHER PTHR10515:SF0 1 440 4.6E-183 T 22-04-2016 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 112 127 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 PIRSF PIRSF000478 1 439 1.1E-145 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK58_RS05615 4f1d3b5c21653f8ae127c4faa6580b8f 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 308 6.3E-36 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 PANTHER PTHR24423:SF505 1 108 5.2E-12 T 22-04-2016 AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 Pfam PF13426 PAS domain 2 95 1.6E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 SUPERFAMILY SSF55785 2 105 3.77E-25 T 22-04-2016 IPR000014 PAS domain AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 PANTHER PTHR24423 1 108 5.2E-12 T 22-04-2016 AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 105 1.1E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS22100 c1bfc9227e83ca2ea2ac76387de61539 109 Gene3D G3DSA:3.30.450.20 2 94 4.0E-19 T 22-04-2016 AMK58_RS01985 3d47b6e535e4a25e8cd39cc7c1830eec 89 Pfam PF11154 Protein of unknown function (DUF2934) 9 42 1.6E-13 T 22-04-2016 IPR021327 Protein of unknown function DUF2934 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 445 1.0E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.5E-30 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.5E-30 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.5E-30 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.5E-30 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.5E-30 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 Gene3D G3DSA:3.50.50.60 5 138 9.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PANTHER PTHR22912:SF106 2 449 5.0E-203 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PIRSF PIRSF000350 2 445 1.6E-87 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 Gene3D G3DSA:3.50.50.60 139 325 2.9E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 446 1.1E-195 T 22-04-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PANTHER PTHR22912 2 449 5.0E-203 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 317 1.3E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 Gene3D G3DSA:3.30.390.30 336 449 7.7E-43 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 9.2E-66 T 22-04-2016 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 SUPERFAMILY SSF51905 5 361 6.48E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS08605 054555f835e7e2fd5655c6bb7453e78c 450 SUPERFAMILY SSF55424 334 447 1.51E-34 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 PRINTS PR00050 Cold shock protein signature 139 154 3.7E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 PRINTS PR00050 Cold shock protein signature 175 193 3.7E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 PRINTS PR00050 Cold shock protein signature 160 169 3.7E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 Gene3D G3DSA:2.40.50.140 21 83 1.6E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 Gene3D G3DSA:2.40.50.140 138 200 1.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 SUPERFAMILY SSF50249 137 200 4.95E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 SUPERFAMILY SSF50249 20 84 1.56E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 PANTHER PTHR11544 139 196 5.4E-20 T 22-04-2016 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 SMART SM00357 138 202 1.3E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 SMART SM00357 21 85 9.0E-16 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 Pfam PF00313 'Cold-shock' DNA-binding domain 21 83 9.4E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04525 e159a7cbfa4aa0973ad1fadff219f329 202 Pfam PF00313 'Cold-shock' DNA-binding domain 138 199 1.0E-23 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 23.347 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 5.1E-33 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 Gene3D G3DSA:3.30.1280.10 1 78 4.7E-37 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 PANTHER PTHR34696 1 78 3.8E-29 T 22-04-2016 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 1.0E-20 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 SUPERFAMILY SSF82697 1 78 3.31E-30 T 22-04-2016 AMK58_RS11435 d5e0f0030aec66ab804b65d7dcfc9b42 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 1.2E-35 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 Gene3D G3DSA:3.30.590.10 114 433 3.8E-93 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 Pfam PF00120 Glutamine synthetase, catalytic domain 112 442 4.4E-104 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 SMART SM01230 110 366 1.9E-110 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 SUPERFAMILY SSF55931 111 443 2.16E-106 T 22-04-2016 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 Gene3D G3DSA:3.10.20.70 6 113 1.9E-19 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 PANTHER PTHR20852:SF63 1 447 2.5E-206 T 22-04-2016 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 246 261 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 SUPERFAMILY SSF54368 5 109 3.79E-21 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK58_RS07860 a4b9f95f135b2cda59628a4e108a2d3c 447 PANTHER PTHR20852 1 447 2.5E-206 T 22-04-2016 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 Pfam PF01649 Ribosomal protein S20 2 84 9.2E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 Gene3D G3DSA:1.20.58.110 1 86 5.7E-30 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.412 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 4.0E-19 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 SUPERFAMILY SSF46992 3 86 2.49E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 PANTHER PTHR33398 1 86 3.6E-29 T 22-04-2016 AMK58_RS00905 f3d0db9cada02d235b398fe41ae6350b 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.7E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12435 6b228cd81e6d0893e318dbf5506ae852 500 SUPERFAMILY SSF52402 191 291 1.5E-7 T 22-04-2016 AMK58_RS12435 6b228cd81e6d0893e318dbf5506ae852 500 Gene3D G3DSA:3.40.50.620 204 293 3.5E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PANTHER PTHR19375 2 637 0.0 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 SUPERFAMILY SSF53067 1 183 2.54E-65 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 SUPERFAMILY SSF100934 502 600 1.96E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.30.420.40 119 191 9.6E-66 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.30.420.40 4 52 9.6E-66 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 SUPERFAMILY SSF53067 187 377 6.17E-68 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 37.949 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 SUPERFAMILY SSF100920 379 535 1.19E-62 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PANTHER PTHR19375:SF173 2 637 0.0 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:1.20.1270.10 528 598 3.0E-31 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 5.7E-302 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:2.60.34.10 385 527 3.9E-72 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.90.640.10 225 310 1.9E-30 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 464 480 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 360 380 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 383 402 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 329 345 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 PRINTS PR00301 70kDa heat shock protein signature 197 207 6.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.30.420.40 192 224 6.7E-36 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.30.420.40 314 356 6.7E-36 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Gene3D G3DSA:3.30.30.30 53 106 8.7E-26 T 22-04-2016 AMK58_RS13750 6b37ce8ee5e92037d4db99f163b02773 639 Pfam PF00012 Hsp70 protein 4 599 8.7E-276 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 Gene3D G3DSA:1.10.3810.10 52 216 2.0E-58 T 22-04-2016 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 Pfam PF00912 Transglycosylase 52 215 1.0E-48 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 PANTHER PTHR30400:SF0 1 216 4.0E-91 T 22-04-2016 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 PANTHER PTHR30400 1 216 4.0E-91 T 22-04-2016 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 4 221 42.337 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 221 5.2E-81 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMK58_RS02605 208acf2c2f370ab0ae8e94e687ea2e26 228 SUPERFAMILY SSF53955 49 217 6.19E-57 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 SUPERFAMILY SSF51556 61 376 1.44E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 Gene3D G3DSA:2.30.40.10 7 73 4.1E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 PANTHER PTHR32027:SF0 7 385 2.1E-109 T 22-04-2016 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 SUPERFAMILY SSF51338 367 400 1.87E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 SUPERFAMILY SSF51338 4 61 1.87E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 PANTHER PTHR32027 7 385 2.1E-109 T 22-04-2016 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 Gene3D G3DSA:3.20.20.140 74 367 1.5E-91 T 22-04-2016 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 Pfam PF07969 Amidohydrolase family 51 136 3.5E-8 T 22-04-2016 IPR013108 Amidohydrolase 3 AMK58_RS11060 9f7d5e65a9248378e74394c64ecb576c 415 Pfam PF07969 Amidohydrolase family 165 384 2.6E-17 T 22-04-2016 IPR013108 Amidohydrolase 3 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Pfam PF01588 Putative tRNA binding domain 1 86 2.1E-16 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Gene3D G3DSA:3.30.56.10 87 123 3.9E-8 T 22-04-2016 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 SUPERFAMILY SSF50249 1 136 9.55E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 PANTHER PTHR10947:SF0 3 401 1.1E-120 T 22-04-2016 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 SMART SM00874 341 401 3.2E-10 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 SUPERFAMILY SSF46955 342 401 2.84E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Pfam PF03484 tRNA synthetase B5 domain 344 401 9.9E-10 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 401 1.2E-121 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Gene3D G3DSA:3.30.56.20 341 401 4.4E-13 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 SMART SM00873 153 325 1.9E-83 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Gene3D G3DSA:2.40.50.140 1 86 2.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Gene3D G3DSA:3.50.40.10 141 333 4.7E-79 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 PANTHER PTHR10947 3 401 1.1E-120 T 22-04-2016 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 Pfam PF03483 B3/4 domain 153 325 1.1E-62 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK58_RS26100 553b3dc30eb57d2521c571d87aa1ec9c 401 SUPERFAMILY SSF56037 138 336 1.91E-71 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK58_RS00485 a71f3c3aa5aa7e1c8bdd4ef87fb7d2ba 111 SUPERFAMILY SSF101386 10 98 5.01E-26 T 22-04-2016 AMK58_RS00485 a71f3c3aa5aa7e1c8bdd4ef87fb7d2ba 111 PANTHER PTHR21256 3 109 3.6E-44 T 22-04-2016 AMK58_RS00485 a71f3c3aa5aa7e1c8bdd4ef87fb7d2ba 111 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 11 94 3.2E-33 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK58_RS00485 a71f3c3aa5aa7e1c8bdd4ef87fb7d2ba 111 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 8 94 20.109 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK58_RS00485 a71f3c3aa5aa7e1c8bdd4ef87fb7d2ba 111 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 13 97 1.9E-20 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK58_RS01140 06bdd37d99d75398355c248b8a9a14e4 132 SUPERFAMILY SSF52172 17 125 3.13E-8 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01140 06bdd37d99d75398355c248b8a9a14e4 132 Gene3D G3DSA:3.40.50.2300 22 127 3.1E-8 T 22-04-2016 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 Gene3D G3DSA:3.40.390.30 22 160 1.6E-46 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 Pfam PF02130 Uncharacterized protein family UPF0054 23 150 1.0E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 42 151 3.6E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 PANTHER PTHR22881 41 159 2.4E-51 T 22-04-2016 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 155 24.254 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK58_RS00710 4b4f05572abcb2d34fdaffb8d3fcaca7 176 SUPERFAMILY SSF55486 29 157 4.21E-45 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Pfam PF02743 Cache domain 85 248 1.1E-12 T 22-04-2016 IPR033479 Double Cache domain 1 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Gene3D G3DSA:3.30.565.10 559 731 7.3E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PANTHER PTHR24423 1 22 2.7E-109 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PANTHER PTHR24423 340 743 2.7E-109 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Gene3D G3DSA:1.10.287.130 498 558 1.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Gene3D G3DSA:3.30.450.20 343 483 5.2E-24 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 492 5.8E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SUPERFAMILY SSF55874 563 730 3.8E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SMART SM00388 505 573 4.2E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SUPERFAMILY SSF55785 367 492 1.52E-24 T 22-04-2016 IPR000014 PAS domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Pfam PF00989 PAS fold 357 456 4.8E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 731 2.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SUPERFAMILY SSF47384 492 574 1.06E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SMART SM00387 619 732 2.6E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Gene3D G3DSA:3.30.450.20 201 311 9.5E-5 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Gene3D G3DSA:3.30.450.20 113 200 4.3E-9 T 22-04-2016 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 SMART SM00091 356 422 4.2E-11 T 22-04-2016 IPR000014 PAS domain AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 Pfam PF00512 His Kinase A (phospho-acceptor) domain 505 573 4.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 729 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 671 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 685 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02550 9c58ffd4080b3f8a9a77e1c62e14f313 748 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 710 1.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Gene3D G3DSA:3.40.50.2000 464 614 1.4E-10 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Pfam PF13432 Tetratricopeptide repeat 154 214 3.3E-7 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Pfam PF13432 Tetratricopeptide repeat 9 57 0.0025 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Pfam PF13432 Tetratricopeptide repeat 266 318 0.0019 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 PANTHER PTHR23083 7 342 2.4E-48 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SUPERFAMILY SSF53756 371 616 2.88E-27 T 22-04-2016 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Gene3D G3DSA:1.25.40.10 125 342 9.3E-46 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 Gene3D G3DSA:1.25.40.10 6 124 2.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 72 108 81.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 284 317 15.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 148 181 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 4 37 5.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 216 249 1.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SMART SM00028 182 215 0.0021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SUPERFAMILY SSF48452 7 180 5.31E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS11350 386d5f68521db0af08bb4026d7ecd7be 641 SUPERFAMILY SSF48452 147 345 4.64E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 PANTHER PTHR10366 296 576 1.8E-109 T 22-04-2016 AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 SUPERFAMILY SSF53335 105 340 8.97E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 Pfam PF13727 CoA-binding domain 61 207 1.3E-10 T 22-04-2016 AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 PANTHER PTHR10366:SF256 296 576 1.8E-109 T 22-04-2016 AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 Gene3D G3DSA:3.90.25.10 484 568 6.7E-8 T 22-04-2016 AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 SUPERFAMILY SSF51735 294 569 1.58E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 Pfam PF02719 Polysaccharide biosynthesis protein 297 591 8.4E-111 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 Gene3D G3DSA:3.40.50.720 296 483 4.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09250 1a35838d6086dafe8a25edb74045ce2a 654 Gene3D G3DSA:3.40.50.720 148 197 4.1E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 PIRSF PIRSF006769 6 372 2.8E-127 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 153 365 7.9E-52 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 PANTHER PTHR11079:SF10 9 228 7.5E-59 T 22-04-2016 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 14 365 2.1E-100 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 Pfam PF01872 RibD C-terminal domain 157 363 5.1E-44 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 Gene3D G3DSA:3.40.430.10 135 370 1.0E-74 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 PANTHER PTHR11079 9 228 7.5E-59 T 22-04-2016 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 106 1.5E-15 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 Gene3D G3DSA:3.40.140.10 10 134 3.6E-31 T 22-04-2016 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 95 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 SUPERFAMILY SSF53927 10 151 3.01E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS08325 98f4711c7b8fd8b8f8046e99d988cd82 372 SUPERFAMILY SSF53597 152 368 1.4E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 Pfam PF01464 Transglycosylase SLT domain 503 601 9.1E-26 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 Gene3D G3DSA:1.25.20.10 33 395 1.6E-27 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 Gene3D G3DSA:1.10.530.10 503 642 1.2E-46 T 22-04-2016 AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 SUPERFAMILY SSF53955 502 640 1.02E-43 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 SUPERFAMILY SSF48435 33 482 7.98E-63 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AMK58_RS07430 dbf511724f2de90688a15dc4a89f8374 654 PANTHER PTHR21666 472 642 3.2E-41 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 Pfam PF03023 MviN-like protein 27 469 2.2E-119 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PIRSF PIRSF002869 1 512 1.3E-156 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 499 5.7E-138 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206 215 458 7.3E-67 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206 116 121 7.3E-67 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 257 283 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 155 176 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 355 374 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 50 66 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 131 155 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 31 50 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PRINTS PR01806 Virulence factor MviN signature 407 424 3.0E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206 75 85 7.3E-67 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206:SF90 215 458 7.3E-67 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206:SF90 75 85 7.3E-67 T 22-04-2016 AMK58_RS06565 f0cf968cd7980c37cfc7e92acaddc01c 516 PANTHER PTHR11206:SF90 116 121 7.3E-67 T 22-04-2016 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 SUPERFAMILY SSF54373 215 315 3.92E-8 T 22-04-2016 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Pfam PF01266 FAD dependent oxidoreductase 5 352 1.2E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 SUPERFAMILY SSF51905 316 366 1.23E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 SUPERFAMILY SSF51905 4 217 1.23E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Gene3D G3DSA:3.30.9.10 213 315 5.2E-29 T 22-04-2016 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Gene3D G3DSA:3.30.9.10 60 148 5.2E-29 T 22-04-2016 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 PANTHER PTHR10961 7 370 1.4E-59 T 22-04-2016 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Gene3D G3DSA:3.50.50.60 4 57 1.2E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Gene3D G3DSA:3.50.50.60 319 363 1.2E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 Gene3D G3DSA:3.50.50.60 149 209 1.2E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS12620 6ade5c0e9a2f7bbb54f500bfcb1dcc7a 370 PANTHER PTHR10961:SF7 7 370 1.4E-59 T 22-04-2016 AMK58_RS00125 89ba702ed7c5e8eda074f9f5a46f6c51 133 SUPERFAMILY SSF46785 31 119 6.59E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00125 89ba702ed7c5e8eda074f9f5a46f6c51 133 SMART SM00347 25 129 0.0031 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00125 89ba702ed7c5e8eda074f9f5a46f6c51 133 Gene3D G3DSA:1.10.10.10 29 119 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00125 89ba702ed7c5e8eda074f9f5a46f6c51 133 Pfam PF13463 Winged helix DNA-binding domain 42 106 6.3E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 Pfam PF00793 DAHP synthetase I family 12 259 1.4E-70 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 274 7.3E-125 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 PANTHER PTHR21057 5 275 5.6E-158 T 22-04-2016 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 SUPERFAMILY SSF51569 5 274 8.06E-107 T 22-04-2016 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 Gene3D G3DSA:3.20.20.70 18 274 4.6E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 275 52.111 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK58_RS06460 fd859373b0b2a71e9156a935ae0fca6e 275 PANTHER PTHR21057:SF2 5 275 5.6E-158 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK58_RS09485 e8cf8ce81c1477599731ebf553fbedd2 196 Pfam PF13302 Acetyltransferase (GNAT) domain 24 166 3.4E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS09485 e8cf8ce81c1477599731ebf553fbedd2 196 PANTHER PTHR13256 12 195 1.0E-54 T 22-04-2016 AMK58_RS09485 e8cf8ce81c1477599731ebf553fbedd2 196 PANTHER PTHR13256:SF24 12 195 1.0E-54 T 22-04-2016 AMK58_RS09485 e8cf8ce81c1477599731ebf553fbedd2 196 SUPERFAMILY SSF55729 13 191 1.8E-48 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS09485 e8cf8ce81c1477599731ebf553fbedd2 196 Gene3D G3DSA:3.40.630.30 12 191 5.0E-54 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS10650 a87d10bc1f0dd73be3b7495b73ab6a7f 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 243 1.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10650 a87d10bc1f0dd73be3b7495b73ab6a7f 260 SUPERFAMILY SSF161098 51 237 4.58E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10650 a87d10bc1f0dd73be3b7495b73ab6a7f 260 Gene3D G3DSA:1.10.3720.10 51 244 1.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10650 a87d10bc1f0dd73be3b7495b73ab6a7f 260 PANTHER PTHR30151:SF17 9 259 1.2E-120 T 22-04-2016 AMK58_RS10650 a87d10bc1f0dd73be3b7495b73ab6a7f 260 PANTHER PTHR30151 9 259 1.2E-120 T 22-04-2016 AMK58_RS18800 3f4cd39f1f347e9575d15314a21e9a42 149 Pfam PF07484 Phage Tail Collar Domain 44 99 1.6E-20 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS18800 3f4cd39f1f347e9575d15314a21e9a42 149 SUPERFAMILY SSF88874 39 145 5.23E-29 T 22-04-2016 AMK58_RS18800 3f4cd39f1f347e9575d15314a21e9a42 149 Gene3D G3DSA:3.90.1340.10 37 105 1.9E-24 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS18800 3f4cd39f1f347e9575d15314a21e9a42 149 PANTHER PTHR34720 39 140 1.3E-19 T 22-04-2016 AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 Pfam PF03831 PhnA domain 49 118 1.7E-32 T 22-04-2016 IPR013988 PhnA protein, C-terminal AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 PANTHER PTHR30305 2 118 2.1E-70 T 22-04-2016 AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 Gene3D G3DSA:2.20.25.10 1 37 3.5E-19 T 22-04-2016 AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 6 118 2.6E-42 T 22-04-2016 IPR004624 PhnA protein AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 SUPERFAMILY SSF57783 6 35 2.38E-12 T 22-04-2016 AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 Pfam PF08274 PhnA Zinc-Ribbon 6 31 2.8E-14 T 22-04-2016 IPR013987 PhnA protein, N-terminal AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 SUPERFAMILY SSF82057 47 118 4.58E-26 T 22-04-2016 AMK58_RS08760 92c109abb8be33d5f13ed7164915245f 118 Gene3D G3DSA:2.30.30.40 49 118 8.2E-35 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 2.8E-42 T 22-04-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 743 1.6E-105 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Pfam PF02867 Ribonucleotide reductase, barrel domain 803 905 2.0E-17 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 828 930 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 634 739 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 392 609 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 191 308 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 1192 1239 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 108 160 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573:SF18 950 1114 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 SUPERFAMILY SSF75625 296 385 4.71E-14 T 22-04-2016 IPR029072 YebC-like AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 SUPERFAMILY SSF51998 197 303 2.04E-125 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 SUPERFAMILY SSF51998 387 708 2.04E-125 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 SUPERFAMILY SSF51998 833 916 2.04E-125 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 828 930 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 634 739 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 392 609 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 191 308 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 1192 1239 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 108 160 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PANTHER PTHR11573 950 1114 0.0 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:1.10.10.200 300 363 1.1E-8 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:3.20.70.20 41 65 2.5E-93 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:3.20.70.20 864 910 2.5E-93 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:3.20.70.20 383 583 2.5E-93 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:3.20.70.20 102 299 2.5E-93 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Gene3D G3DSA:3.20.70.20 656 702 2.5E-93 T 22-04-2016 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 131 744 5.6E-147 T 22-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 Pfam PF01709 Transcriptional regulator 296 364 9.1E-8 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PRINTS PR01183 Ribonucleotide reductase large chain signature 535 557 5.44E-5 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS10925 a801f6fcfd8f9f4f0649b66322dfaa8f 1239 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 5.44E-5 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK58_RS11600 bbdd7310ad974cb42534c12937e9559e 380 SUPERFAMILY SSF53448 46 299 1.64E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11600 bbdd7310ad974cb42534c12937e9559e 380 PANTHER PTHR10859:SF86 28 377 1.3E-139 T 22-04-2016 AMK58_RS11600 bbdd7310ad974cb42534c12937e9559e 380 Pfam PF00535 Glycosyl transferase family 2 49 209 2.8E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS11600 bbdd7310ad974cb42534c12937e9559e 380 Gene3D G3DSA:3.90.550.10 47 174 4.0E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11600 bbdd7310ad974cb42534c12937e9559e 380 PANTHER PTHR10859 28 377 1.3E-139 T 22-04-2016 AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 PANTHER PTHR23417 28 252 1.5E-35 T 22-04-2016 AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 Pfam PF02390 Putative methyltransferase 81 245 5.4E-33 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 PANTHER PTHR23417:SF14 28 252 1.5E-35 T 22-04-2016 AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 SUPERFAMILY SSF53335 79 248 6.26E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 35 252 23.738 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK58_RS29265 3cfa7a6bd33837ee9821ae9e1696a720 252 Gene3D G3DSA:3.40.50.150 80 194 2.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Pfam PF11870 Domain of unknown function (DUF3390) 399 470 1.6E-9 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 PANTHER PTHR32479 35 471 8.8E-170 T 22-04-2016 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 296 1.4E-51 T 22-04-2016 IPR003741 LUD domain AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 SUPERFAMILY SSF100950 133 297 2.43E-41 T 22-04-2016 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 SUPERFAMILY SSF100950 62 87 2.43E-41 T 22-04-2016 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 PANTHER PTHR32479:SF10 35 471 8.8E-170 T 22-04-2016 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 314 325 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 SUPERFAMILY SSF46548 275 394 2.27E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Gene3D G3DSA:1.10.1060.10 308 397 9.5E-13 T 22-04-2016 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Gene3D G3DSA:3.40.50.10420 191 297 7.9E-50 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Gene3D G3DSA:3.40.50.10420 63 126 7.9E-50 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 3.5E-141 T 22-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 AMK58_RS00555 c133cddbf8ebd76c53b359e6311c18bb 483 Pfam PF13183 4Fe-4S dicluster domain 311 378 2.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS09410 bbfbee11b200925350cf2c209c7ca88b 439 Gene3D G3DSA:3.30.1330.60 311 436 5.0E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09410 bbfbee11b200925350cf2c209c7ca88b 439 PANTHER PTHR30128 317 439 1.4E-24 T 22-04-2016 AMK58_RS09410 bbfbee11b200925350cf2c209c7ca88b 439 SUPERFAMILY SSF103088 302 435 1.28E-29 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09410 bbfbee11b200925350cf2c209c7ca88b 439 Pfam PF00691 OmpA family 325 430 2.7E-19 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS06520 e526d710aa884bc323b64c5534dbe0d6 74 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 2.2E-23 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 PIRSF PIRSF003107 6 224 5.9E-57 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 Gene3D G3DSA:1.20.58.220 7 115 1.4E-30 T 22-04-2016 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 Pfam PF01895 PhoU domain 24 110 2.3E-21 T 22-04-2016 IPR026022 PhoU domain AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 Pfam PF01895 PhoU domain 128 210 1.2E-18 T 22-04-2016 IPR026022 PhoU domain AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 SUPERFAMILY SSF109755 11 222 4.4E-60 T 22-04-2016 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 PANTHER PTHR10010 7 217 4.5E-60 T 22-04-2016 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 218 1.2E-57 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 Gene3D G3DSA:1.20.58.220 124 218 8.0E-26 T 22-04-2016 AMK58_RS05535 386521c4ff77a6654530d45096b07991 234 PANTHER PTHR10010:SF14 7 217 4.5E-60 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 SUPERFAMILY SSF53383 19 329 5.56E-54 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 Gene3D G3DSA:3.90.1150.10 249 315 2.0E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 PANTHER PTHR11751 11 338 1.7E-53 T 22-04-2016 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 PANTHER PTHR11751:SF3 11 338 1.7E-53 T 22-04-2016 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 Pfam PF00155 Aminotransferase class I and II 68 325 8.2E-32 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 19 339 3.3E-104 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 AMK58_RS08105 f5caf535f7ef83a64e2763258b10c969 345 Gene3D G3DSA:3.40.640.10 58 248 9.6E-44 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 141 652 2.6E-185 T 22-04-2016 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 Gene3D G3DSA:3.40.710.10 303 662 6.0E-115 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 Pfam PF00905 Penicillin binding protein transpeptidase domain 387 616 8.7E-30 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 PANTHER PTHR32282:SF5 87 686 3.6E-211 T 22-04-2016 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 SUPERFAMILY SSF53955 116 322 1.46E-73 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 PANTHER PTHR32282 87 686 3.6E-211 T 22-04-2016 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 Gene3D G3DSA:1.10.3810.10 129 302 4.0E-70 T 22-04-2016 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 Pfam PF00912 Transglycosylase 134 300 2.5E-63 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS13155 537adb38c0de5ab8d08632b4cfb94717 723 SUPERFAMILY SSF56601 282 665 1.64E-119 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS04120 282d9c74f3f7390a5bf968face303302 245 PANTHER PTHR33824:SF2 18 242 2.7E-29 T 22-04-2016 AMK58_RS04120 282d9c74f3f7390a5bf968face303302 245 Gene3D G3DSA:3.30.530.20 79 216 2.8E-8 T 22-04-2016 IPR023393 START-like domain AMK58_RS04120 282d9c74f3f7390a5bf968face303302 245 PANTHER PTHR33824 18 242 2.7E-29 T 22-04-2016 AMK58_RS04120 282d9c74f3f7390a5bf968face303302 245 SUPERFAMILY SSF55961 81 215 7.27E-25 T 22-04-2016 AMK58_RS04120 282d9c74f3f7390a5bf968face303302 245 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 84 208 8.3E-13 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 PANTHER PTHR23537:SF1 2 385 2.3E-49 T 22-04-2016 AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 SUPERFAMILY SSF103473 4 375 1.15E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 12 372 5.0E-85 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 Gene3D G3DSA:1.20.1250.20 10 188 4.6E-16 T 22-04-2016 AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 PANTHER PTHR23537 2 385 2.3E-49 T 22-04-2016 AMK58_RS01205 9dfc24c44b39a0e01d5c0c547e4b0c2b 395 Gene3D G3DSA:1.20.1250.20 205 374 4.6E-12 T 22-04-2016 AMK58_RS07160 10161f56c234f6ca4d56c00939471762 283 PANTHER PTHR10859:SF99 1 101 3.5E-17 T 22-04-2016 AMK58_RS07160 10161f56c234f6ca4d56c00939471762 283 PANTHER PTHR10859 1 101 3.5E-17 T 22-04-2016 AMK58_RS07160 10161f56c234f6ca4d56c00939471762 283 Gene3D G3DSA:3.90.550.10 3 105 1.1E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07160 10161f56c234f6ca4d56c00939471762 283 SUPERFAMILY SSF53448 2 112 1.03E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07160 10161f56c234f6ca4d56c00939471762 283 Pfam PF00535 Glycosyl transferase family 2 5 113 1.3E-11 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 PANTHER PTHR11819 355 581 7.2E-208 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 PANTHER PTHR11819 4 306 7.2E-208 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 PANTHER PTHR11819:SF159 355 581 7.2E-208 T 22-04-2016 AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 PANTHER PTHR11819:SF159 4 306 7.2E-208 T 22-04-2016 AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 578 2.5E-256 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 Pfam PF00474 Sodium:solute symporter family 33 298 8.8E-34 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS11045 65a7a9cc539316a57e1553817819f4a8 587 Pfam PF00474 Sodium:solute symporter family 389 506 8.9E-16 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 Pfam PF01434 Peptidase family M41 386 584 2.0E-67 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 323 5.1E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 PANTHER PTHR23076 18 586 5.4E-237 T 22-04-2016 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 136 586 1.8E-179 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 Gene3D G3DSA:1.10.8.60 334 399 1.8E-22 T 22-04-2016 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 Gene3D G3DSA:3.40.50.300 153 333 3.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 SMART SM00382 186 327 1.9E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 SUPERFAMILY SSF140990 407 589 5.23E-63 T 22-04-2016 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 7 591 32.83 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK58_RS09125 a43b796a9f0e5129ef442360c08788fe 596 SUPERFAMILY SSF52540 151 395 6.87E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11655 7fac3f9782aedb430dc8cda4023460aa 271 PANTHER PTHR23024 46 270 1.1E-32 T 22-04-2016 AMK58_RS11655 7fac3f9782aedb430dc8cda4023460aa 271 Gene3D G3DSA:3.40.50.1820 22 256 9.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11655 7fac3f9782aedb430dc8cda4023460aa 271 Pfam PF07859 alpha/beta hydrolase fold 65 174 1.8E-15 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMK58_RS11655 7fac3f9782aedb430dc8cda4023460aa 271 SUPERFAMILY SSF53474 6 268 3.38E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11655 7fac3f9782aedb430dc8cda4023460aa 271 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 129 144 - T 22-04-2016 IPR019826 Carboxylesterase type B, active site AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 172 261 2.9E-6 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 Gene3D G3DSA:3.30.465.10 55 165 5.0E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 PANTHER PTHR11908:SF68 4 262 7.8E-79 T 22-04-2016 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 Gene3D G3DSA:3.30.43.10 1 51 3.6E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 SUPERFAMILY SSF55447 170 261 3.01E-19 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 SMART SM01092 171 263 2.8E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 SUPERFAMILY SSF56176 1 165 3.92E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 164 2.1E-49 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 Gene3D G3DSA:3.30.390.50 171 262 9.3E-18 T 22-04-2016 AMK58_RS07560 7bcb579939015015d1dc4b66c7ba8bb8 264 PANTHER PTHR11908 4 262 7.8E-79 T 22-04-2016 AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 ProSitePatterns PS00674 AAA-protein family signature. 217 236 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 119 244 1.4E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 PANTHER PTHR23077 87 264 7.3E-34 T 22-04-2016 AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 PANTHER PTHR23077 302 320 7.3E-34 T 22-04-2016 AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 SMART SM00382 115 247 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 Gene3D G3DSA:3.40.50.300 78 261 2.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13585 0ff51e0414daf10fc04703dc7f07c5ff 360 SUPERFAMILY SSF52540 77 288 2.52E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 PANTHER PTHR30349 137 164 8.8E-37 T 22-04-2016 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 PANTHER PTHR30349 189 426 8.8E-37 T 22-04-2016 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 Pfam PF00589 Phage integrase family 238 397 1.1E-30 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 PANTHER PTHR30349:SF20 137 164 8.8E-37 T 22-04-2016 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 PANTHER PTHR30349:SF20 189 426 8.8E-37 T 22-04-2016 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 SUPERFAMILY SSF56349 107 163 5.89E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 SUPERFAMILY SSF56349 190 404 5.89E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 Gene3D G3DSA:1.10.150.130 107 219 6.2E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS01885 d9601a7eac43472c550c85b0b84c7670 427 Gene3D G3DSA:1.10.443.10 237 400 5.4E-38 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 286 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 266 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 245 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PRINTS PR00344 Bacterial sensor protein C-terminal signature 217 231 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 Gene3D G3DSA:1.10.287.130 45 125 9.8E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 Pfam PF00512 His Kinase A (phospho-acceptor) domain 50 126 3.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 SUPERFAMILY SSF55874 125 290 1.44E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 178 286 3.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 SMART SM00387 176 289 2.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PANTHER PTHR24423:SF445 96 287 2.8E-56 T 22-04-2016 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PANTHER PTHR24423:SF445 14 78 2.8E-56 T 22-04-2016 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 SUPERFAMILY SSF47384 45 115 6.28E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PANTHER PTHR24423 96 287 2.8E-56 T 22-04-2016 AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 Gene3D G3DSA:3.30.565.10 137 286 1.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05795 a23afe8f780edb993d7fae82775cecd9 296 PANTHER PTHR24423 14 78 2.8E-56 T 22-04-2016 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 SUPERFAMILY SSF53223 1 107 3.51E-32 T 22-04-2016 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 Gene3D G3DSA:3.40.192.10 2 112 2.4E-39 T 22-04-2016 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 128 173 1.6E-7 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 Gene3D G3DSA:3.40.50.720 113 276 2.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 PANTHER PTHR21089:SF1 1 272 5.8E-85 T 22-04-2016 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 275 1.6E-67 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 3.3E-28 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 SUPERFAMILY SSF51735 108 275 1.93E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 283 32.971 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS00410 073448b516f0293eef51fc8f323b4a13 284 PANTHER PTHR21089 1 272 5.8E-85 T 22-04-2016 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 140 9.0E-20 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 114 135 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 152 5.5E-46 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 9 161 30.883 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 SUPERFAMILY SSF143243 8 187 4.18E-62 T 22-04-2016 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 PANTHER PTHR10884 1 208 2.5E-100 T 22-04-2016 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 PANTHER PTHR10884:SF10 1 208 2.5E-100 T 22-04-2016 AMK58_RS06130 ed59261039e8f554cbbffe4cb4838e73 209 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 154 5.2E-45 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:2.40.40.20 656 678 2.6E-53 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:2.40.40.20 823 960 2.6E-53 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:2.40.40.20 780 791 2.6E-53 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 75 92 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 SMART SM00926 70 124 1.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:3.40.228.10 200 380 6.1E-62 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 SUPERFAMILY SSF50692 767 794 4.97E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 SUPERFAMILY SSF50692 824 959 4.97E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:3.40.50.740 127 198 2.8E-70 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:3.40.50.740 381 407 2.8E-70 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:3.40.50.740 448 655 2.8E-70 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Pfam PF01568 Molydopterin dinucleotide binding domain 829 955 1.0E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 SUPERFAMILY SSF53706 68 650 1.44E-201 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615:SF140 19 391 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615:SF140 410 603 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615:SF140 743 962 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Gene3D G3DSA:2.20.25.90 69 124 2.3E-16 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Pfam PF00384 Molybdopterin oxidoreductase 127 572 6.1E-57 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615 19 391 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615 410 603 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 PANTHER PTHR11615 743 962 0.0 T 22-04-2016 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 71 123 1.3E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK58_RS04330 f66202aba0cfaeba3e4e281ecaf5e9cc 962 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 27 54 8.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK58_RS06610 6a51b7170d89fec828e88f4a7fb64a62 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 253 1.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS06610 6a51b7170d89fec828e88f4a7fb64a62 269 SUPERFAMILY SSF161098 61 245 3.4E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS06610 6a51b7170d89fec828e88f4a7fb64a62 269 PANTHER PTHR30151:SF18 12 268 4.8E-114 T 22-04-2016 AMK58_RS06610 6a51b7170d89fec828e88f4a7fb64a62 269 PANTHER PTHR30151 12 268 4.8E-114 T 22-04-2016 AMK58_RS06610 6a51b7170d89fec828e88f4a7fb64a62 269 Gene3D G3DSA:1.10.3720.10 59 254 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 Gene3D G3DSA:3.20.20.70 122 265 6.8E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 Gene3D G3DSA:3.20.20.70 302 356 6.8E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 SUPERFAMILY SSF51690 297 381 1.38E-29 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 SUPERFAMILY SSF51690 126 260 1.38E-29 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 117 7.2E-5 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 Gene3D G3DSA:3.90.1170.20 42 121 4.8E-5 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMK58_RS08595 6e2a22287d310c81617e8e7dfe96d084 387 SUPERFAMILY SSF54675 24 117 2.49E-8 T 22-04-2016 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 PANTHER PTHR26402:SF474 1 218 3.0E-55 T 22-04-2016 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 216 7.8E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 Gene3D G3DSA:3.40.50.2300 2 127 9.1E-27 T 22-04-2016 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 PANTHER PTHR26402 1 218 3.0E-55 T 22-04-2016 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 SUPERFAMILY SSF46894 157 218 1.84E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 Pfam PF00072 Response regulator receiver domain 3 115 1.4E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 SMART SM00448 1 115 1.3E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 SMART SM00421 160 217 1.2E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 1.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 1.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 1.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 SUPERFAMILY SSF52172 2 128 3.98E-25 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03795 16df8529ab6db8f434ebca1e944c645c 220 Gene3D G3DSA:1.10.10.10 159 217 4.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03130 bda810e531fa271807e5d6fbcf543094 320 PANTHER PTHR33608:SF6 8 313 7.1E-88 T 22-04-2016 AMK58_RS03130 bda810e531fa271807e5d6fbcf543094 320 PANTHER PTHR33608 8 313 7.1E-88 T 22-04-2016 AMK58_RS03130 bda810e531fa271807e5d6fbcf543094 320 Pfam PF01882 Protein of unknown function DUF58 48 132 2.8E-21 T 22-04-2016 IPR002881 Domain of unknown function DUF58 AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 396 8.0E-58 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 414 618 5.5E-29 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 PANTHER PTHR33362:SF1 444 690 1.9E-249 T 22-04-2016 AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 PANTHER PTHR33362:SF1 1 406 1.9E-249 T 22-04-2016 AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 PANTHER PTHR33362 444 690 1.9E-249 T 22-04-2016 AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 PANTHER PTHR33362 1 406 1.9E-249 T 22-04-2016 AMK58_RS07580 cc71d30d39920562f87dbe3a9a2a0828 698 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 690 8.4E-220 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 SUPERFAMILY SSF55120 100 347 1.42E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 Pfam PF01479 S4 domain 39 85 1.6E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 SUPERFAMILY SSF55174 39 127 4.04E-8 T 22-04-2016 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 38 345 1.2E-96 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 PANTHER PTHR11079 29 348 5.8E-133 T 22-04-2016 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 SMART SM00363 39 99 0.0017 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 Gene3D G3DSA:3.10.290.10 39 86 3.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 Pfam PF00849 RNA pseudouridylate synthase 114 271 4.5E-37 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 161 175 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS09610 7bb7467b88c7b3da6f6d4766912da6b6 350 PANTHER PTHR11079:SF73 29 348 5.8E-133 T 22-04-2016 AMK58_RS12070 074d2223798919298c29b80f737e4239 206 Gene3D G3DSA:1.20.1050.10 89 200 4.2E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS12070 074d2223798919298c29b80f737e4239 206 SUPERFAMILY SSF52833 1 86 6.41E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12070 074d2223798919298c29b80f737e4239 206 PANTHER PTHR11260 2 206 2.5E-52 T 22-04-2016 AMK58_RS12070 074d2223798919298c29b80f737e4239 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 196 6.9E-14 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMK58_RS12070 074d2223798919298c29b80f737e4239 206 SUPERFAMILY SSF47616 84 202 2.23E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS12070 074d2223798919298c29b80f737e4239 206 PANTHER PTHR11260:SF178 2 206 2.5E-52 T 22-04-2016 AMK58_RS12070 074d2223798919298c29b80f737e4239 206 Gene3D G3DSA:3.40.30.10 2 88 7.3E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12070 074d2223798919298c29b80f737e4239 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 1.2E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 SUPERFAMILY SSF64182 69 480 1.96E-113 T 22-04-2016 AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 41 592 2.0E-160 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 Pfam PF02272 DHHA1 domain 412 464 1.3E-4 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 PANTHER PTHR30255 14 597 7.0E-186 T 22-04-2016 AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 Pfam PF01368 DHH family 96 197 1.2E-9 T 22-04-2016 IPR001667 DDH domain AMK58_RS06795 e59050b485ac2240de97ff733d0d2161 599 PANTHER PTHR30255:SF2 14 597 7.0E-186 T 22-04-2016 AMK58_RS00645 039ca0a245daff62d7e59c891a6ad858 488 Gene3D G3DSA:3.40.50.150 228 478 2.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00645 039ca0a245daff62d7e59c891a6ad858 488 SUPERFAMILY SSF53335 227 434 4.94E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00645 039ca0a245daff62d7e59c891a6ad858 488 Pfam PF01564 Spermine/spermidine synthase 281 411 4.9E-6 T 22-04-2016 AMK58_RS00645 039ca0a245daff62d7e59c891a6ad858 488 PANTHER PTHR12176 266 399 3.3E-24 T 22-04-2016 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 Gene3D G3DSA:3.30.1730.10 16 176 1.2E-55 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 SUPERFAMILY SSF53167 20 509 2.02E-144 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 Pfam PF01048 Phosphorylase superfamily 286 456 5.8E-14 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 24 175 4.8E-51 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 Gene3D G3DSA:3.40.50.1580 185 489 4.1E-110 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 23 509 6.8E-193 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 PANTHER PTHR21234 272 509 2.9E-115 T 22-04-2016 IPR018017 Nucleoside phosphorylase AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 PANTHER PTHR21234 191 236 2.9E-115 T 22-04-2016 IPR018017 Nucleoside phosphorylase AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 Hamap MF_01932 AMP nucleosidase [amn]. 15 509 61.494 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 PANTHER PTHR21234:SF11 272 509 2.9E-115 T 22-04-2016 AMK58_RS02460 c09c412d7b17b7276aae9be0010d7b7c 509 PANTHER PTHR21234:SF11 191 236 2.9E-115 T 22-04-2016 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 SUPERFAMILY SSF56784 6 198 3.83E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 54 184 7.3E-16 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 181 7.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 183 1.0E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PANTHER PTHR12725:SF63 1 202 5.8E-29 T 22-04-2016 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 Gene3D G3DSA:3.40.50.1000 3 200 9.4E-41 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 4.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 4.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 4.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 4.1E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS10745 b19d04639a16cd1fab97c5ce6a13e78f 203 PANTHER PTHR12725 1 202 5.8E-29 T 22-04-2016 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 PIRSF PIRSF001554 1 397 3.8E-153 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 PANTHER PTHR11815 1 398 9.7E-239 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Gene3D G3DSA:3.30.470.20 105 248 5.1E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 SUPERFAMILY SSF52210 248 394 4.06E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Gene3D G3DSA:3.40.50.261 250 392 5.6E-69 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 SUPERFAMILY SSF56059 1 247 9.49E-83 T 22-04-2016 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 266 291 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Pfam PF00549 CoA-ligase 271 391 8.0E-27 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Pfam PF08442 ATP-grasp domain 2 211 7.3E-78 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Gene3D G3DSA:3.30.1490.20 22 104 9.6E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 394 8.9E-162 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS06930 05d443176a8337bc76c1c421b5686883 398 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 395 43.014 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS08375 8470fcba67b4dfe4e1a611e399eaa08c 154 Pfam PF04343 Protein of unknown function, DUF488 18 134 9.2E-26 T 22-04-2016 IPR007438 Protein of unknown function DUF488 AMK58_RS08375 8470fcba67b4dfe4e1a611e399eaa08c 154 PANTHER PTHR39337 1 147 1.6E-31 T 22-04-2016 AMK58_RS08375 8470fcba67b4dfe4e1a611e399eaa08c 154 PIRSF PIRSF024492 3 152 8.2E-28 T 22-04-2016 IPR014519 Uncharacterised conserved protein UCP024492 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 196 383 1.6E-31 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 SMART SM00331 169 383 3.7E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 PANTHER PTHR26402 8 132 2.0E-40 T 22-04-2016 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 Pfam PF00072 Response regulator receiver domain 10 122 1.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 SUPERFAMILY SSF52172 9 149 1.42E-39 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 SMART SM00448 8 122 1.8E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02335 6062e8cf2ff12d0b5fdf79fd0ef42cce 385 Gene3D G3DSA:3.40.50.2300 8 141 1.9E-39 T 22-04-2016 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 Gene3D G3DSA:3.30.1700.10 140 290 1.7E-58 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 11 289 45.615 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 Gene3D G3DSA:3.30.230.20 12 136 2.0E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 PANTHER PTHR33694:SF1 10 290 1.1E-114 T 22-04-2016 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 SUPERFAMILY SSF54211 144 286 3.34E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 11 294 9.4E-104 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 13 284 1.5E-110 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 PANTHER PTHR33694 10 290 1.1E-114 T 22-04-2016 AMK58_RS03885 b3b9c22544ca11e220555191eb5c0281 314 SUPERFAMILY SSF54211 11 136 9.86E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 SUPERFAMILY SSF56053 83 177 3.74E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 9.0E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 Pfam PF00347 Ribosomal protein L6 91 164 3.3E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 Pfam PF00347 Ribosomal protein L6 11 82 2.6E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PIRSF PIRSF002162 1 177 1.0E-48 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 Gene3D G3DSA:3.90.930.12 83 177 5.0E-41 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.7E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.7E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.7E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 SUPERFAMILY SSF56053 1 82 3.6E-24 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PANTHER PTHR11655:SF14 1 176 3.1E-83 T 22-04-2016 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 Gene3D G3DSA:3.90.930.12 2 82 2.8E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 PANTHER PTHR11655 1 176 3.1E-83 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS10330 d2a007dee17f71368aeb0c74500741c0 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.551 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.5E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 SUPERFAMILY SSF55424 344 465 1.6E-43 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 SUPERFAMILY SSF51905 1 322 2.24E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PANTHER PTHR22912:SF151 7 459 6.6E-256 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 Gene3D G3DSA:3.50.50.60 5 142 2.3E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.0E-79 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 Gene3D G3DSA:3.50.50.60 143 334 7.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PIRSF PIRSF000350 1 462 9.8E-85 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 8.0E-40 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.0E-40 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 8.0E-40 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.0E-40 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.0E-40 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 PANTHER PTHR22912 7 459 6.6E-256 T 22-04-2016 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 328 8.2E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 466 1.9E-175 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMK58_RS11815 1602097db96199307725be827f1d1c3a 466 Gene3D G3DSA:3.30.390.30 335 465 3.8E-50 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK58_RS06660 8122e3f94085830ddb53a2873b329b70 152 Pfam PF07883 Cupin domain 48 119 1.1E-19 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS06660 8122e3f94085830ddb53a2873b329b70 152 PANTHER PTHR10245:SF48 18 152 2.2E-44 T 22-04-2016 AMK58_RS06660 8122e3f94085830ddb53a2873b329b70 152 Gene3D G3DSA:2.60.120.10 31 131 4.7E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS06660 8122e3f94085830ddb53a2873b329b70 152 PANTHER PTHR10245 18 152 2.2E-44 T 22-04-2016 AMK58_RS06660 8122e3f94085830ddb53a2873b329b70 152 SUPERFAMILY SSF51182 25 138 8.48E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS03390 52b3c7018c6c19e27cbf85b0eedaf068 163 PANTHER PTHR37302:SF2 1 163 3.2E-29 T 22-04-2016 AMK58_RS03390 52b3c7018c6c19e27cbf85b0eedaf068 163 Pfam PF05163 DinB family 2 158 1.1E-36 T 22-04-2016 IPR007837 DNA damage-inducible protein DinB AMK58_RS03390 52b3c7018c6c19e27cbf85b0eedaf068 163 Gene3D G3DSA:1.20.120.450 1 162 1.3E-45 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMK58_RS03390 52b3c7018c6c19e27cbf85b0eedaf068 163 SUPERFAMILY SSF109854 4 145 1.68E-37 T 22-04-2016 AMK58_RS03390 52b3c7018c6c19e27cbf85b0eedaf068 163 PANTHER PTHR37302 1 163 3.2E-29 T 22-04-2016 AMK58_RS11420 8f56dcf3b07a131de78bf473aa1c4ce9 106 Pfam PF07345 Domain of unknown function (DUF1476) 1 101 8.8E-38 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 AMK58_RS11420 8f56dcf3b07a131de78bf473aa1c4ce9 106 PIRSF PIRSF031780 1 106 7.4E-31 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 Gene3D G3DSA:3.60.21.10 11 219 7.5E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS13010 0331db434890c8cc75320f902132652a 243 PANTHER PTHR31302 10 139 2.5E-14 T 22-04-2016 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 PANTHER PTHR31302 156 174 2.5E-14 T 22-04-2016 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 PANTHER PTHR31302 190 211 2.5E-14 T 22-04-2016 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 PIRSF PIRSF008292 9 243 3.7E-86 T 22-04-2016 IPR016538 Uncharacterised conserved protein UCP008292 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 Pfam PF00149 Calcineurin-like phosphoesterase 11 210 1.8E-16 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK58_RS13010 0331db434890c8cc75320f902132652a 243 SUPERFAMILY SSF56300 11 229 1.19E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS03930 640d64c53dd42d592615a5c64a25bfa5 374 PANTHER PTHR30474:SF2 2 369 4.7E-99 T 22-04-2016 AMK58_RS03930 640d64c53dd42d592615a5c64a25bfa5 374 Pfam PF01098 Cell cycle protein 27 368 5.1E-76 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK58_RS03930 640d64c53dd42d592615a5c64a25bfa5 374 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 21 368 2.2E-102 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AMK58_RS03930 640d64c53dd42d592615a5c64a25bfa5 374 PANTHER PTHR30474 2 369 4.7E-99 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 PIRSF PIRSF006779 1 236 4.2E-55 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 PANTHER PTHR35092 1 235 6.7E-57 T 22-04-2016 AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 231 2.9E-70 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 PANTHER PTHR35092:SF1 1 235 6.7E-57 T 22-04-2016 AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 SUPERFAMILY SSF102522 1 140 5.89E-50 T 22-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 Gene3D G3DSA:2.40.30.90 160 231 1.3E-16 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMK58_RS01135 046fec1096f22dbb2ba70decc0c5dea3 247 SUPERFAMILY SSF101852 154 235 2.48E-17 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.533 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 Gene3D G3DSA:3.10.430.100 61 146 1.6E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 1.0E-37 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 SUPERFAMILY SSF55658 1 55 3.49E-18 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 PANTHER PTHR21368 1 163 1.1E-45 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 4.2E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 SUPERFAMILY SSF55653 58 147 7.32E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 Gene3D G3DSA:3.40.5.10 1 52 1.0E-24 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 2.8E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK58_RS07380 4e24a06ca21adbc94de0644e668a41dc 188 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 SMART SM00962 110 311 1.8E-113 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 SUPERFAMILY SSF47364 11 88 3.01E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 PANTHER PTHR11564:SF16 6 310 4.4E-120 T 22-04-2016 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 309 1.5E-100 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 Gene3D G3DSA:3.40.50.300 109 311 6.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 39 311 59.077 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 SMART SM00382 109 289 3.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 SMART SM00963 16 95 8.4E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 Gene3D G3DSA:1.20.120.140 4 90 5.3E-24 T 22-04-2016 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 Pfam PF02881 SRP54-type protein, helical bundle domain 27 88 1.2E-9 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 PANTHER PTHR11564 6 310 4.4E-120 T 22-04-2016 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 Pfam PF00448 SRP54-type protein, GTPase domain 110 310 1.8E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK58_RS02465 8d59fe80fff4532a23e674c3be774eb4 315 SUPERFAMILY SSF52540 109 311 2.58E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 PANTHER PTHR31793 16 159 5.3E-39 T 22-04-2016 AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 Pfam PF03061 Thioesterase superfamily 34 117 1.1E-16 T 22-04-2016 IPR006683 Thioesterase domain AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 SUPERFAMILY SSF54637 18 150 4.49E-37 T 22-04-2016 IPR029069 HotDog domain AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 PANTHER PTHR31793:SF9 16 159 5.3E-39 T 22-04-2016 AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 Gene3D G3DSA:3.10.129.10 19 149 1.7E-42 T 22-04-2016 IPR029069 HotDog domain AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 PIRSF PIRSF003230 12 156 7.1E-42 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 20 147 1.3E-43 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- AMK58_RS09285 5e84bb89ebd6ff98c9e47676e1b3ad8c 159 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 23 126 1.4E-29 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 Gene3D G3DSA:3.40.960.10 302 345 6.1E-4 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 128 162 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PANTHER PTHR30194 10 184 4.1E-62 T 22-04-2016 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 Pfam PF04480 Protein of unknown function (DUF559) 236 339 5.6E-37 T 22-04-2016 IPR007569 Domain of unknown function DUF559 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 16 168 45.689 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 76 92 1.0E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 153 165 1.0E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 98 114 1.0E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 19 32 1.0E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 122 141 1.0E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 SUPERFAMILY SSF53098 17 170 8.91E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 18 168 1.4E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 19 165 3.8E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 Gene3D G3DSA:3.30.420.10 17 170 1.3E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09300 efca6a3f6cc71c35166ba2f1811252cc 360 SUPERFAMILY SSF52980 235 341 2.25E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 Gene3D G3DSA:2.30.110.10 3 203 7.1E-83 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 6 201 5.5E-74 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 2 203 39.277 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 PANTHER PTHR10851 3 203 8.1E-94 T 22-04-2016 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 PIRSF PIRSF000190 1 203 7.8E-76 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 156 203 1.6E-15 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 PANTHER PTHR10851:SF0 3 203 8.1E-94 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 166 179 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 SUPERFAMILY SSF50475 7 203 2.43E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK58_RS09110 40895a29955753402e57eb89ecd7bf9e 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 17 103 8.4E-28 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Gene3D G3DSA:3.10.20.30 4 85 4.7E-22 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Pfam PF01799 [2Fe-2S] binding domain 84 161 1.3E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 SUPERFAMILY SSF55447 371 477 5.1E-31 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 70 1.6E-5 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 PANTHER PTHR11908 1 474 9.4E-132 T 22-04-2016 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 365 1.5E-51 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 SMART SM01092 373 475 9.0E-33 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Gene3D G3DSA:3.30.390.50 374 476 1.4E-34 T 22-04-2016 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 SUPERFAMILY SSF54292 4 88 1.31E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Gene3D G3DSA:3.30.465.10 253 365 5.5E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Gene3D G3DSA:1.10.150.120 86 176 3.3E-34 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 SUPERFAMILY SSF47741 96 175 8.9E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 474 4.9E-189 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 SUPERFAMILY SSF56176 186 366 1.09E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Gene3D G3DSA:3.30.43.10 203 252 4.8E-23 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 374 474 1.0E-29 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK58_RS07060 5dfed41cc011d8d2f7e123a1e7e120c4 488 PIRSF PIRSF036557 2 487 1.7E-196 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 Gene3D G3DSA:3.40.30.10 2 88 3.0E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 SUPERFAMILY SSF52833 1 83 4.3E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 1.2E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 PANTHER PTHR11260 2 200 1.2E-36 T 22-04-2016 AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 SUPERFAMILY SSF47616 80 204 1.95E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 Pfam PF14497 Glutathione S-transferase, C-terminal domain 110 202 7.5E-6 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMK58_RS12130 4406dda34771fc2a8af79747623697a4 211 Gene3D G3DSA:1.20.1050.10 89 194 1.0E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS05865 3607d5fa33d817625c841bf9c23d469c 403 Pfam PF03594 Benzoate membrane transport protein 17 392 1.2E-96 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK58_RS05865 3607d5fa33d817625c841bf9c23d469c 403 TIGRFAM TIGR00843 benE: benzoate transporter 21 390 1.8E-73 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK58_RS05865 3607d5fa33d817625c841bf9c23d469c 403 PANTHER PTHR30199:SF0 16 402 1.1E-95 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK58_RS05865 3607d5fa33d817625c841bf9c23d469c 403 PANTHER PTHR30199 16 402 1.1E-95 T 22-04-2016 AMK58_RS03825 9ec74ac1b83a7ada4315056b52fb9641 153 Pfam PF05099 Tellurite resistance protein TerB 8 138 6.8E-32 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK58_RS03825 9ec74ac1b83a7ada4315056b52fb9641 153 Gene3D G3DSA:1.10.3680.10 21 138 3.2E-17 T 22-04-2016 IPR029024 TerB-like AMK58_RS03825 9ec74ac1b83a7ada4315056b52fb9641 153 SUPERFAMILY SSF158682 19 146 7.72E-26 T 22-04-2016 IPR029024 TerB-like AMK58_RS10020 19933c738038fc3e734990978742c42b 321 Gene3D G3DSA:3.40.50.1100 90 316 6.6E-61 T 22-04-2016 AMK58_RS10020 19933c738038fc3e734990978742c42b 321 PANTHER PTHR10314 13 318 3.5E-107 T 22-04-2016 AMK58_RS10020 19933c738038fc3e734990978742c42b 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 306 4.1E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS10020 19933c738038fc3e734990978742c42b 321 PANTHER PTHR10314:SF17 13 318 3.5E-107 T 22-04-2016 AMK58_RS10020 19933c738038fc3e734990978742c42b 321 SUPERFAMILY SSF53686 29 313 4.06E-79 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 SUPERFAMILY SSF52172 366 488 7.97E-36 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 Pfam PF00072 Response regulator receiver domain 370 483 6.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 Gene3D G3DSA:3.40.50.2300 364 487 1.8E-38 T 22-04-2016 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 Pfam PF01627 Hpt domain 534 617 1.2E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 SMART SM00448 368 485 1.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 Gene3D G3DSA:1.20.120.160 508 619 4.0E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 SUPERFAMILY SSF47226 510 620 4.45E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 PANTHER PTHR24423 367 526 1.7E-45 T 22-04-2016 AMK58_RS03725 5aa34b9e5a604382174c89999de6a970 623 PANTHER PTHR24423 3 23 1.7E-45 T 22-04-2016 AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 SUPERFAMILY SSF53335 1 186 6.98E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 PANTHER PTHR18895:SF60 2 187 8.1E-24 T 22-04-2016 AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 Pfam PF03602 Conserved hypothetical protein 95 1 185 5.4E-44 T 22-04-2016 AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 Gene3D G3DSA:3.40.50.150 1 187 2.0E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 186 1.1E-37 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 PIRSF PIRSF004553 1 188 1.2E-44 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS11300 b2841f2952330aa17a67a173dfa8aeed 192 PANTHER PTHR18895 2 187 8.1E-24 T 22-04-2016 AMK58_RS10785 9b8fe12ee6ab9022dce3c701d9baef48 281 SUPERFAMILY SSF54001 37 150 2.45E-14 T 22-04-2016 AMK58_RS10785 9b8fe12ee6ab9022dce3c701d9baef48 281 Pfam PF05257 CHAP domain 9 100 2.1E-6 T 22-04-2016 IPR007921 CHAP domain AMK58_RS13595 0c0be2cb5630e475a3e1001ebc8797ed 274 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 28 243 2.7E-57 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like AMK58_RS13595 0c0be2cb5630e475a3e1001ebc8797ed 274 SUPERFAMILY SSF53098 5 207 7.59E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13595 0c0be2cb5630e475a3e1001ebc8797ed 274 Gene3D G3DSA:3.30.420.10 6 197 3.9E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS05570 14104e4fbc4c343e3eea7f9b484d26b9 225 Pfam PF09335 SNARE associated Golgi protein 34 164 5.7E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS05570 14104e4fbc4c343e3eea7f9b484d26b9 225 PANTHER PTHR30353 5 216 1.4E-46 T 22-04-2016 IPR032818 DedA family AMK58_RS05570 14104e4fbc4c343e3eea7f9b484d26b9 225 PANTHER PTHR30353:SF13 5 216 1.4E-46 T 22-04-2016 AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 Pfam PF05161 MOFRL family 308 413 5.9E-37 T 22-04-2016 IPR007835 MOFRL domain AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 PANTHER PTHR12227:SF0 7 419 1.1E-143 T 22-04-2016 AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 PANTHER PTHR12227 7 419 1.1E-143 T 22-04-2016 AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 Gene3D G3DSA:3.40.50.10180 10 240 2.3E-102 T 22-04-2016 AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 SUPERFAMILY SSF82544 4 419 6.02E-157 T 22-04-2016 AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 Gene3D G3DSA:3.40.1480.10 241 419 5.8E-72 T 22-04-2016 IPR007835 MOFRL domain AMK58_RS06965 c7683f3ed8d2893a388599953dc7308d 420 Pfam PF13660 Domain of unknown function (DUF4147) 10 228 2.7E-84 T 22-04-2016 IPR025286 MOFRL-associated domain AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 PIRSF PIRSF002825 6 342 1.2E-92 T 22-04-2016 IPR026045 Ferric binding protein AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 PANTHER PTHR30006 24 337 1.7E-131 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 Pfam PF13343 Bacterial extracellular solute-binding protein 75 314 3.3E-29 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 Gene3D G3DSA:3.40.190.10 274 311 1.9E-33 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 Gene3D G3DSA:3.40.190.10 9 124 1.9E-33 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 PANTHER PTHR30006:SF4 24 337 1.7E-131 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 SUPERFAMILY SSF53850 28 338 4.78E-88 T 22-04-2016 AMK58_RS12580 c4cbb5bad6fd04f95387c7b3fac6839c 342 Gene3D G3DSA:3.40.190.10 128 273 3.6E-54 T 22-04-2016 AMK58_RS01155 23ae503f3d3a4d0c6e58ecdc7d2ae739 144 Pfam PF01475 Ferric uptake regulator family 11 130 8.4E-38 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK58_RS01155 23ae503f3d3a4d0c6e58ecdc7d2ae739 144 SUPERFAMILY SSF46785 4 132 5.94E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01155 23ae503f3d3a4d0c6e58ecdc7d2ae739 144 Gene3D G3DSA:1.10.10.10 4 81 5.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01155 23ae503f3d3a4d0c6e58ecdc7d2ae739 144 PANTHER PTHR33202 4 132 6.6E-35 T 22-04-2016 AMK58_RS01905 d6d960f1b428fa5f7061dac9b3aa5f16 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 255 4.4E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01905 d6d960f1b428fa5f7061dac9b3aa5f16 262 SUPERFAMILY SSF161098 64 248 4.58E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01905 d6d960f1b428fa5f7061dac9b3aa5f16 262 PANTHER PTHR30151:SF0 12 258 3.8E-89 T 22-04-2016 AMK58_RS01905 d6d960f1b428fa5f7061dac9b3aa5f16 262 PANTHER PTHR30151 12 258 3.8E-89 T 22-04-2016 AMK58_RS01905 d6d960f1b428fa5f7061dac9b3aa5f16 262 Gene3D G3DSA:1.10.3720.10 58 255 4.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08400 3d47ffa6498aabd16a9fcd64db157ee2 306 PANTHER PTHR10584 8 223 1.1E-83 T 22-04-2016 AMK58_RS08400 3d47ffa6498aabd16a9fcd64db157ee2 306 Pfam PF04227 Indigoidine synthase A like protein 10 299 7.2E-132 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK58_RS08400 3d47ffa6498aabd16a9fcd64db157ee2 306 SUPERFAMILY SSF110581 2 301 1.19E-114 T 22-04-2016 AMK58_RS08400 3d47ffa6498aabd16a9fcd64db157ee2 306 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 9 303 45.018 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK58_RS08400 3d47ffa6498aabd16a9fcd64db157ee2 306 PANTHER PTHR10584:SF1 8 223 1.1E-83 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 SUPERFAMILY SSF51735 2 107 3.15E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 SUPERFAMILY SSF75615 103 165 3.92E-14 T 22-04-2016 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 Gene3D G3DSA:3.30.160.110 109 143 3.9E-15 T 22-04-2016 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 Pfam PF14824 Sirohaem biosynthesis protein central 114 139 5.3E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 PANTHER PTHR35330 1 179 6.7E-25 T 22-04-2016 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 Gene3D G3DSA:3.40.50.720 2 106 4.9E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 Pfam PF13241 Putative NAD(P)-binding 5 110 2.8E-15 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK58_RS08205 eed445029d873d37f63dade003ec2eb8 185 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 9 162 3.7E-25 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 Pfam PF04280 Tim44-like domain 221 356 1.8E-29 T 22-04-2016 IPR007379 Tim44-like domain AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 SMART SM00978 213 356 1.8E-35 T 22-04-2016 IPR007379 Tim44-like domain AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 PANTHER PTHR41542 74 357 3.2E-47 T 22-04-2016 AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 PANTHER PTHR41542 11 56 3.2E-47 T 22-04-2016 AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 SUPERFAMILY SSF54427 235 358 7.89E-24 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 PANTHER PTHR41542:SF1 74 357 3.2E-47 T 22-04-2016 AMK58_RS12055 4cd7c52e5b9c479a6b3188450f75f8d9 358 PANTHER PTHR41542:SF1 11 56 3.2E-47 T 22-04-2016 AMK58_RS03565 7623b5e7f9dc285ad6d5e5394a32f4e1 176 PANTHER PTHR36570 1 174 4.3E-12 T 22-04-2016 AMK58_RS03565 7623b5e7f9dc285ad6d5e5394a32f4e1 176 Pfam PF02600 Disulfide bond formation protein DsbB 11 160 9.3E-35 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMK58_RS03565 7623b5e7f9dc285ad6d5e5394a32f4e1 176 SUPERFAMILY SSF158442 16 160 2.48E-31 T 22-04-2016 AMK58_RS03565 7623b5e7f9dc285ad6d5e5394a32f4e1 176 PIRSF PIRSF033913 4 167 1.3E-34 T 22-04-2016 IPR024199 Uncharacterised conserved protein, DsbB-like AMK58_RS03565 7623b5e7f9dc285ad6d5e5394a32f4e1 176 Gene3D G3DSA:1.20.1550.10 8 168 7.9E-29 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain AMK58_RS01465 4bcccdf5604271882c6e18ac779316d1 137 SUPERFAMILY SSF55486 12 133 7.77E-35 T 22-04-2016 AMK58_RS01465 4bcccdf5604271882c6e18ac779316d1 137 PANTHER PTHR41522 8 137 9.4E-29 T 22-04-2016 AMK58_RS01465 4bcccdf5604271882c6e18ac779316d1 137 Gene3D G3DSA:3.40.390.10 95 128 3.0E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK58_RS01465 4bcccdf5604271882c6e18ac779316d1 137 Pfam PF06262 Zinicin-like metallopeptidase 38 133 6.9E-36 T 22-04-2016 IPR010428 Zinicin-like metallopeptidase AMK58_RS08795 75f6688d373f326dae680cb2ad6cdaf4 164 PANTHER PTHR31793 11 151 1.3E-47 T 22-04-2016 AMK58_RS08795 75f6688d373f326dae680cb2ad6cdaf4 164 Pfam PF13279 Thioesterase-like superfamily 15 134 5.3E-20 T 22-04-2016 AMK58_RS08795 75f6688d373f326dae680cb2ad6cdaf4 164 Gene3D G3DSA:3.10.129.10 6 143 3.2E-48 T 22-04-2016 IPR029069 HotDog domain AMK58_RS08795 75f6688d373f326dae680cb2ad6cdaf4 164 PANTHER PTHR31793:SF2 11 151 1.3E-47 T 22-04-2016 AMK58_RS08795 75f6688d373f326dae680cb2ad6cdaf4 164 SUPERFAMILY SSF54637 11 159 4.6E-44 T 22-04-2016 IPR029069 HotDog domain AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Gene3D G3DSA:1.10.1160.10 237 317 3.7E-14 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 SUPERFAMILY SSF48163 283 442 1.02E-29 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PANTHER PTHR11451 3 326 1.5E-74 T 22-04-2016 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Gene3D G3DSA:3.90.800.10 68 182 3.6E-29 T 22-04-2016 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PANTHER PTHR11451:SF41 3 326 1.5E-74 T 22-04-2016 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 324 3.1E-94 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 307 4.2E-74 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 SUPERFAMILY SSF52374 3 299 2.15E-90 T 22-04-2016 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Gene3D G3DSA:3.40.50.620 184 233 7.4E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Gene3D G3DSA:3.40.50.620 3 67 7.4E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 446 27.568 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 Gene3D G3DSA:1.10.10.350 361 443 3.2E-14 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.0E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.0E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.0E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.0E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.0E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS11555 18e792265981ba902aa0f31f7e2386db 447 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS08590 f15d224226a2c02c2b8f35b2cde960ce 110 SUPERFAMILY SSF52833 8 106 1.34E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08590 f15d224226a2c02c2b8f35b2cde960ce 110 PANTHER PTHR11780 10 107 2.3E-27 T 22-04-2016 AMK58_RS08590 f15d224226a2c02c2b8f35b2cde960ce 110 Gene3D G3DSA:3.40.30.10 9 106 4.1E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08590 f15d224226a2c02c2b8f35b2cde960ce 110 PANTHER PTHR11780:SF12 10 107 2.3E-27 T 22-04-2016 AMK58_RS03700 ac762b9ca74d4e986de403a4966dd5ff 288 SUPERFAMILY SSF53187 14 277 3.14E-82 T 22-04-2016 AMK58_RS03700 ac762b9ca74d4e986de403a4966dd5ff 288 Pfam PF05013 N-formylglutamate amidohydrolase 20 249 1.8E-66 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase AMK58_RS03700 ac762b9ca74d4e986de403a4966dd5ff 288 Gene3D G3DSA:3.40.630.40 14 279 4.6E-94 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 SMART SM00062 32 275 0.0042 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 PANTHER PTHR30024 1 270 7.9E-50 T 22-04-2016 AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 Gene3D G3DSA:3.40.190.10 115 246 1.5E-23 T 22-04-2016 AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 PANTHER PTHR30024:SF8 1 270 7.9E-50 T 22-04-2016 AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 SUPERFAMILY SSF53850 29 277 1.17E-47 T 22-04-2016 AMK58_RS06615 b52b55d36bfa68cc4062d36d42a56d63 339 Pfam PF09084 NMT1/THI5 like 44 254 1.8E-31 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS09645 ff0ebf39c1de12390cf127270e37601d 463 PIRSF PIRSF006247 1 463 6.5E-148 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AMK58_RS09645 ff0ebf39c1de12390cf127270e37601d 463 PANTHER PTHR32024:SF3 1 463 6.7E-162 T 22-04-2016 AMK58_RS09645 ff0ebf39c1de12390cf127270e37601d 463 PANTHER PTHR32024 1 463 6.7E-162 T 22-04-2016 AMK58_RS09645 ff0ebf39c1de12390cf127270e37601d 463 Pfam PF02386 Cation transport protein 19 456 2.6E-52 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 21 98 5.2E-18 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 SUPERFAMILY SSF58104 20 93 2.09E-23 T 22-04-2016 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 Gene3D G3DSA:1.10.287.950 20 93 1.4E-21 T 22-04-2016 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 PANTHER PTHR32089 23 79 3.8E-15 T 22-04-2016 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 Gene3D G3DSA:3.30.450.20 144 247 2.7E-7 T 22-04-2016 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 25 52 1.8E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 54 83 1.8E-11 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04450 d81b416e13c58cb68dfa846b42fc1032 368 PANTHER PTHR32089:SF56 23 79 3.8E-15 T 22-04-2016 AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 Gene3D G3DSA:1.10.1660.10 15 97 1.2E-13 T 22-04-2016 AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 SUPERFAMILY SSF46955 15 85 8.24E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 PANTHER PTHR30204:SF15 6 83 4.4E-21 T 22-04-2016 AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 PANTHER PTHR30204 6 83 4.4E-21 T 22-04-2016 AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 SMART SM00422 15 84 0.0015 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK58_RS08250 4329f2eb631f4a888e848719c7fed92b 162 Pfam PF13411 MerR HTH family regulatory protein 15 82 1.2E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 SUPERFAMILY SSF54637 23 161 5.36E-40 T 22-04-2016 IPR029069 HotDog domain AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 Pfam PF01515 Phosphate acetyl/butaryl transferase 256 468 2.5E-47 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 Gene3D G3DSA:3.40.50.10750 286 445 1.2E-52 T 22-04-2016 AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 SUPERFAMILY SSF53659 190 472 5.76E-72 T 22-04-2016 AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 PANTHER PTHR13078 20 134 1.9E-36 T 22-04-2016 AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 Gene3D G3DSA:3.10.129.10 25 156 2.2E-44 T 22-04-2016 IPR029069 HotDog domain AMK58_RS03750 8676f90ec03fa271e328a27478571088 484 Pfam PF01575 MaoC like domain 34 133 3.6E-19 T 22-04-2016 IPR002539 MaoC-like domain AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 Pfam PF02308 MgtC family 23 155 1.3E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 PRINTS PR01837 MgtC/SapB protein signature 26 45 9.9E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 PRINTS PR01837 MgtC/SapB protein signature 45 63 9.9E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 PRINTS PR01837 MgtC/SapB protein signature 82 104 9.9E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 PRINTS PR01837 MgtC/SapB protein signature 109 133 9.9E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS03385 48070afcfc6b6cc0ef24541e00908179 242 PANTHER PTHR33778 19 236 2.9E-46 T 22-04-2016 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 Gene3D G3DSA:1.10.45.10 389 411 9.1E-7 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 SUPERFAMILY SSF55103 200 413 1.14E-21 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 SUPERFAMILY SSF56176 5 185 2.76E-29 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 PANTHER PTHR11748:SF1 5 411 7.9E-78 T 22-04-2016 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 Pfam PF01565 FAD binding domain 6 146 1.1E-14 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 Gene3D G3DSA:3.30.465.10 58 185 4.1E-14 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS04815 4bc5def4782627185a98890e9aeca606 415 PANTHER PTHR11748 5 411 7.9E-78 T 22-04-2016 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 PANTHER PTHR21148 1 369 6.4E-160 T 22-04-2016 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 361 56.517 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 360 6.2E-86 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 SUPERFAMILY SSF51713 4 361 2.22E-153 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 362 2.0E-145 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 368 1.3E-149 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 Gene3D G3DSA:3.20.20.105 4 362 3.3E-156 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05265 a29f8e2e8cabcf7d98bcd7e6eb020f25 400 PANTHER PTHR21148:SF26 1 369 6.4E-160 T 22-04-2016 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 SUPERFAMILY SSF53927 8 138 6.02E-43 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 101 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 105 2.7E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 11 137 4.5E-42 T 22-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 PANTHER PTHR11644 10 139 1.4E-50 T 22-04-2016 AMK58_RS05600 a16d934ff32c0a70d9c8525dc09ee810 140 Gene3D G3DSA:3.40.140.10 6 138 1.5E-47 T 22-04-2016 AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 SUPERFAMILY SSF53756 2 362 4.93E-36 T 22-04-2016 AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 PANTHER PTHR12526 114 362 3.4E-13 T 22-04-2016 AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 PANTHER PTHR12526 48 90 3.4E-13 T 22-04-2016 AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 Pfam PF13579 Glycosyl transferase 4-like domain 1 163 2.9E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 PANTHER PTHR12526:SF374 114 362 3.4E-13 T 22-04-2016 AMK58_RS07150 1820bac059a7f75d12e09d20ea6b8a6e 385 PANTHER PTHR12526:SF374 48 90 3.4E-13 T 22-04-2016 AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 Gene3D G3DSA:1.10.12.10 204 261 7.0E-14 T 22-04-2016 IPR014748 Crontonase, C-terminal AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 260 2.2E-44 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 SUPERFAMILY SSF52096 3 261 4.53E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 Gene3D G3DSA:3.90.226.10 2 201 7.4E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS03170 b367763db229b59069d6c027901ef0c2 262 PANTHER PTHR11941 4 259 3.1E-58 T 22-04-2016 AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 PANTHER PTHR24567 1 184 3.5E-26 T 22-04-2016 AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 Pfam PF13545 Crp-like helix-turn-helix domain 98 171 1.2E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 SMART SM00419 118 166 3.0E-7 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 SUPERFAMILY SSF51206 2 93 4.84E-10 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 Gene3D G3DSA:1.10.10.10 96 173 6.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 PANTHER PTHR24567:SF28 1 184 3.5E-26 T 22-04-2016 AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 Gene3D G3DSA:2.60.120.10 13 74 2.2E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS08455 4687b77309e471a03fd80f20d5d8129c 205 SUPERFAMILY SSF46785 96 171 2.97E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 SUPERFAMILY SSF46977 451 593 1.83E-49 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 593 3.2E-246 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 SUPERFAMILY SSF51905 4 261 5.52E-81 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 SUPERFAMILY SSF51905 360 428 5.52E-81 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 593 1.5E-295 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Gene3D G3DSA:3.90.700.10 245 350 4.1E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Gene3D G3DSA:3.50.50.60 4 244 5.3E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Gene3D G3DSA:3.50.50.60 352 428 5.3E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Gene3D G3DSA:4.10.80.40 541 593 5.0E-27 T 22-04-2016 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 PIRSF PIRSF000171 1 583 7.7E-41 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Gene3D G3DSA:1.20.58.100 434 540 6.9E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 SUPERFAMILY SSF56425 238 356 2.84E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 593 8.7E-42 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 PANTHER PTHR11632 1 588 0.0 T 22-04-2016 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 PANTHER PTHR11632:SF51 1 588 0.0 T 22-04-2016 AMK58_RS02680 0184d236994d97c38e6b557acc63f0ba 593 Pfam PF00890 FAD binding domain 12 406 4.5E-125 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SUPERFAMILY SSF56037 197 395 8.11E-71 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Pfam PF01588 Putative tRNA binding domain 45 145 5.4E-24 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SUPERFAMILY SSF54991 701 797 9.15E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.30.56.10 1 38 1.4E-22 T 22-04-2016 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.30.56.10 155 182 1.4E-22 T 22-04-2016 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 791 42.137 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 PANTHER PTHR10947:SF0 2 797 2.5E-235 T 22-04-2016 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 PANTHER PTHR10947 2 797 2.5E-235 T 22-04-2016 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:2.40.50.140 40 153 1.6E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SUPERFAMILY SSF46955 401 474 6.32E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 797 3.2E-215 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SUPERFAMILY SSF50249 36 195 8.57E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.30.56.20 400 474 4.2E-22 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Pfam PF03147 Ferredoxin-fold anticodon binding domain 704 797 3.5E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SMART SM00896 704 797 1.3E-41 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.30.70.380 706 797 7.3E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.50.40.10 200 392 2.0E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Pfam PF03483 B3/4 domain 212 384 4.4E-62 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Pfam PF03484 tRNA synthetase B5 domain 403 470 1.6E-16 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SMART SM00874 400 470 1.1E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SUPERFAMILY SSF55681 466 687 2.68E-39 T 22-04-2016 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 SMART SM00873 212 384 1.9E-83 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK58_RS01270 96c595d049283f9fd74da534ea7a378a 798 Gene3D G3DSA:3.30.930.10 489 688 6.9E-51 T 22-04-2016 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 Pfam PF00672 HAMP domain 169 236 1.9E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 Gene3D G3DSA:1.10.287.130 231 303 1.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SMART SM00387 353 464 9.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 PANTHER PTHR24423 9 16 3.0E-60 T 22-04-2016 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 PANTHER PTHR24423 181 461 3.0E-60 T 22-04-2016 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 9.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 9.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 Gene3D G3DSA:3.30.565.10 314 461 4.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 456 1.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SUPERFAMILY SSF158472 190 238 9.29E-8 T 22-04-2016 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SUPERFAMILY SSF47384 224 308 7.26E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SMART SM00304 187 240 1.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SUPERFAMILY SSF55874 299 461 2.75E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 2.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS09745 a469cea5792ef3c96e1ab07b3b417fee 465 SMART SM00388 241 308 4.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 SMART SM00327 209 366 1.0E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 PANTHER PTHR39338:SF1 1 388 1.7E-128 T 22-04-2016 AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 PIRSF PIRSF010256 1 383 2.7E-131 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 Gene3D G3DSA:3.40.50.410 212 330 2.9E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 SUPERFAMILY SSF53300 209 340 3.81E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 PANTHER PTHR39338 1 388 1.7E-128 T 22-04-2016 AMK58_RS07550 ba3551dc14ab7c1a50a324a7da5065ce 399 Pfam PF05762 VWA domain containing CoxE-like protein 154 373 1.8E-77 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 Gene3D G3DSA:3.40.50.300 29 227 3.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 SUPERFAMILY SSF52540 29 233 1.98E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 SMART SM00382 33 233 8.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 PANTHER PTHR24220:SF430 7 71 1.3E-50 T 22-04-2016 AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 PANTHER PTHR24220:SF430 88 232 1.3E-50 T 22-04-2016 AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 PANTHER PTHR24220 7 71 1.3E-50 T 22-04-2016 AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 PANTHER PTHR24220 88 232 1.3E-50 T 22-04-2016 AMK58_RS03235 34b5e4d66e6bf517def1f9db17e52423 249 Pfam PF00005 ABC transporter 29 184 1.3E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 15 104 22.558 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 Pfam PF00276 Ribosomal protein L23 16 101 9.2E-34 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 ProSitePatterns PS00050 Ribosomal protein L23 signature. 87 102 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 SUPERFAMILY SSF54189 14 103 9.35E-34 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 Gene3D G3DSA:3.30.70.330 12 104 2.0E-36 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AMK58_RS10395 add48225bd62769f63f7f08df7b82822 105 PANTHER PTHR11620 15 105 8.4E-28 T 22-04-2016 AMK58_RS02055 fb8c2d89f1cd7f0f3d7350baa0953762 137 Pfam PF01878 EVE domain 3 131 7.3E-44 T 22-04-2016 IPR002740 EVE domain AMK58_RS02055 fb8c2d89f1cd7f0f3d7350baa0953762 137 SUPERFAMILY SSF88697 1 135 1.33E-51 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS02055 fb8c2d89f1cd7f0f3d7350baa0953762 137 PANTHER PTHR14087 1 134 3.8E-60 T 22-04-2016 AMK58_RS02055 fb8c2d89f1cd7f0f3d7350baa0953762 137 Gene3D G3DSA:3.10.590.10 1 131 7.8E-23 T 22-04-2016 IPR002740 EVE domain AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 SUPERFAMILY SSF55874 736 904 3.54E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 SUPERFAMILY SSF47384 665 748 1.59E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 Gene3D G3DSA:3.30.565.10 752 904 2.3E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 Gene3D G3DSA:1.10.287.130 672 743 8.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 793 904 3.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 PANTHER PTHR24423 66 76 1.0E-87 T 22-04-2016 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 PANTHER PTHR24423 659 904 1.0E-87 T 22-04-2016 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 883 3.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 844 3.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 889 902 3.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 SMART SM00387 793 905 3.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 Pfam PF00512 His Kinase A (phospho-acceptor) domain 681 747 2.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02420 cc548c7e9ed4f92b32d62338d1338f52 929 SMART SM00388 680 747 5.4E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS08540 d873491290a262bd1057f5d324cbdff7 217 Pfam PF01323 DSBA-like thioredoxin domain 3 198 1.5E-38 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMK58_RS08540 d873491290a262bd1057f5d324cbdff7 217 PANTHER PTHR13887:SF10 1 209 4.8E-52 T 22-04-2016 AMK58_RS08540 d873491290a262bd1057f5d324cbdff7 217 PANTHER PTHR13887 1 209 4.8E-52 T 22-04-2016 AMK58_RS08540 d873491290a262bd1057f5d324cbdff7 217 SUPERFAMILY SSF52833 2 205 5.37E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08540 d873491290a262bd1057f5d324cbdff7 217 Gene3D G3DSA:3.40.30.10 3 203 2.4E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 SUPERFAMILY SSF52172 1 121 8.4E-20 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 SUPERFAMILY SSF46894 150 213 2.04E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 Gene3D G3DSA:1.10.10.10 122 213 8.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 PANTHER PTHR26402:SF151 4 211 3.6E-46 T 22-04-2016 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 Pfam PF00072 Response regulator receiver domain 7 117 7.7E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 Gene3D G3DSA:3.40.50.2300 2 121 5.6E-23 T 22-04-2016 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 SMART SM00421 151 208 1.2E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 PANTHER PTHR26402 4 211 3.6E-46 T 22-04-2016 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 SMART SM00448 4 117 4.9E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08060 8d42adc0727dfb90e0a34efbd6ecc98d 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 1.2E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 SUPERFAMILY SSF53850 7 186 3.8E-55 T 22-04-2016 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 157 179 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 Gene3D G3DSA:3.40.190.10 5 90 3.4E-26 T 22-04-2016 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 SUPERFAMILY SSF55021 176 280 3.09E-20 T 22-04-2016 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 PIRSF PIRSF001500 2 283 7.0E-60 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 PANTHER PTHR21022 7 288 1.8E-91 T 22-04-2016 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 Gene3D G3DSA:3.30.70.260 198 281 1.2E-22 T 22-04-2016 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 Pfam PF00800 Prephenate dehydratase 7 183 6.6E-52 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK58_RS11915 babd818f97ff0705ae0311f3740e2c3d 294 Gene3D G3DSA:3.40.190.10 91 169 1.5E-24 T 22-04-2016 AMK58_RS11545 cb5385b9bef049efb69c5538ae6c72ab 398 PANTHER PTHR36927 1 393 6.3E-34 T 22-04-2016 AMK58_RS11545 cb5385b9bef049efb69c5538ae6c72ab 398 Pfam PF01757 Acyltransferase family 6 355 7.4E-28 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 SUPERFAMILY SSF53383 19 416 2.78E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 Pfam PF00155 Aminotransferase class I and II 50 412 3.1E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 Gene3D G3DSA:3.40.640.10 61 286 2.6E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 PANTHER PTHR11751 30 416 2.2E-97 T 22-04-2016 AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 PANTHER PTHR11751:SF354 30 416 2.2E-97 T 22-04-2016 AMK58_RS13695 edd687b292d56532e5ece7a20ce7c45b 417 Gene3D G3DSA:3.90.1150.10 287 416 2.6E-18 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 477 8.5E-131 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 SUPERFAMILY SSF53623 97 326 2.29E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 PANTHER PTHR23135:SF4 6 479 1.2E-150 T 22-04-2016 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 SUPERFAMILY SSF63418 14 95 2.22E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Gene3D G3DSA:3.40.1190.10 99 330 9.4E-68 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Gene3D G3DSA:3.40.1390.10 10 95 1.0E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 412 3.3E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Pfam PF01225 Mur ligase family, catalytic domain 18 64 4.2E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Gene3D G3DSA:3.90.190.20 331 470 2.6E-50 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 PANTHER PTHR23135 6 479 1.2E-150 T 22-04-2016 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 SUPERFAMILY SSF53244 327 479 5.8E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Pfam PF08245 Mur ligase middle domain 104 306 1.8E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS03950 f97817e0f6c46018b7f511e19e80cb66 483 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 477 30.864 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 SUPERFAMILY SSF54534 224 348 2.55E-9 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 Gene3D G3DSA:3.10.50.40 262 374 2.2E-14 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 PANTHER PTHR10657 201 510 2.4E-61 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 PANTHER PTHR10657 1 173 2.4E-61 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 Pfam PF13624 SurA N-terminal domain 1 162 3.7E-44 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 Pfam PF13145 PPIC-type PPIASE domain 248 363 5.9E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 Pfam PF13145 PPIC-type PPIASE domain 387 478 1.4E-7 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 PANTHER PTHR10657:SF13 201 510 2.4E-61 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 PANTHER PTHR10657:SF13 1 173 2.4E-61 T 22-04-2016 AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 SUPERFAMILY SSF109998 40 168 1.44E-24 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK58_RS06435 b522d2eb734905f5f0665210243c6031 628 SUPERFAMILY SSF109998 242 293 1.44E-24 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 SUPERFAMILY SSF46894 146 211 8.16E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 Gene3D G3DSA:1.10.10.10 146 211 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 PANTHER PTHR26402 1 214 6.0E-63 T 22-04-2016 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 Pfam PF00072 Response regulator receiver domain 3 115 6.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 1.8E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 SMART SM00421 153 210 1.5E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 Gene3D G3DSA:3.40.50.2300 1 127 2.9E-28 T 22-04-2016 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 SMART SM00448 1 115 8.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 SUPERFAMILY SSF52172 1 127 4.98E-26 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08050 7f653a1bfc69e79d54a3d6763ca28c74 215 PANTHER PTHR26402:SF474 1 214 6.0E-63 T 22-04-2016 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 SUPERFAMILY SSF81442 26 536 1.96E-222 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 482 1.4E-156 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PANTHER PTHR10422 17 537 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 Gene3D G3DSA:1.20.210.10 40 504 5.5E-242 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 536 1.3E-218 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 441 462 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 128 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 146 158 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 391 410 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 226 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 196 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 381 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 328 349 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 2.3E-152 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS09535 c03ffc90600614ca1432e7900c8512d9 537 PANTHER PTHR10422:SF18 17 537 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:3.90.1100.10 19 157 4.4E-152 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:3.90.1100.10 692 746 4.4E-152 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:3.90.1100.10 478 624 4.4E-152 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.40.50.100 748 824 7.9E-30 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF04561 RNA polymerase Rpb2, domain 2 383 487 6.2E-20 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:3.90.1110.10 159 261 5.7E-66 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:3.90.1110.10 379 477 5.7E-66 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 SUPERFAMILY SSF64484 12 233 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 SUPERFAMILY SSF64484 376 971 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 SUPERFAMILY SSF64484 1084 1394 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF04563 RNA polymerase beta subunit 27 530 6.8E-34 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1395 12.459 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.30.150.10 625 689 2.4E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF04565 RNA polymerase Rpb2, domain 3 546 614 3.7E-32 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1392 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF10385 RNA polymerase beta subunit external 1 domain 624 689 3.2E-24 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856:SF20 373 758 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856:SF20 1235 1397 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856:SF20 1078 1173 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856:SF20 775 962 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856:SF20 1 238 0.0 T 22-04-2016 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF04560 RNA polymerase Rpb2, domain 7 1319 1393 6.7E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.40.50.150 1090 1104 6.9E-58 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.40.50.150 859 969 6.9E-58 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Pfam PF00562 RNA polymerase Rpb2, domain 6 750 1317 1.2E-169 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.40.270.10 825 852 8.6E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 Gene3D G3DSA:2.40.270.10 1105 1295 8.6E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856 373 758 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856 1235 1397 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856 1078 1173 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856 775 962 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS10445 434dc97899b199b0f198663a816801f9 1397 PANTHER PTHR20856 1 238 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 Gene3D G3DSA:1.10.10.10 141 239 6.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 SUPERFAMILY SSF52172 4 125 8.54E-33 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 PANTHER PTHR26402 4 243 1.5E-56 T 22-04-2016 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 SMART SM00862 160 236 1.6E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 SMART SM00448 4 114 8.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 PANTHER PTHR26402:SF292 4 243 1.5E-56 T 22-04-2016 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 SUPERFAMILY SSF46894 140 238 7.65E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 Gene3D G3DSA:3.40.50.2300 4 124 6.3E-33 T 22-04-2016 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 Pfam PF00072 Response regulator receiver domain 6 113 2.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09140 60a54c2499eda42fd2e603171adc4c4c 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 236 1.0E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 SMART SM00490 549 630 1.1E-23 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 SUPERFAMILY SSF52540 310 644 1.12E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.40.50.300 283 487 7.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.40.50.300 1530 1600 5.8E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.40.50.300 1329 1443 5.8E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 PANTHER PTHR13710 280 649 3.9E-115 T 22-04-2016 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Pfam PF13361 UvrD-like helicase C-terminal domain 1513 1590 3.5E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.40.50.300 1111 1328 2.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Pfam PF00580 UvrD/REP helicase N-terminal domain 1112 1183 2.9E-14 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Pfam PF00580 UvrD/REP helicase N-terminal domain 1232 1316 1.1E-20 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.40.50.300 500 646 1.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 SMART SM00487 290 510 2.0E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 PANTHER PTHR13710:SF81 280 649 3.9E-115 T 22-04-2016 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Pfam PF00271 Helicase conserved C-terminal domain 536 628 1.1E-13 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 286 650 1.8E-86 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 SUPERFAMILY SSF53098 57 144 5.12E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Pfam PF00270 DEAD/DEAH box helicase 306 478 2.1E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 SUPERFAMILY SSF52540 1105 1594 2.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01730 4c98bd81cb88bb7512b0fdf11c3f37cf 1746 Gene3D G3DSA:3.30.420.10 58 112 2.8E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 PANTHER PTHR10996 1 329 8.2E-125 T 22-04-2016 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 324 1.1E-31 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 293 4.2E-58 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 Gene3D G3DSA:3.40.50.720 120 296 4.6E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 SUPERFAMILY SSF52283 6 139 9.26E-38 T 22-04-2016 AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 Gene3D G3DSA:3.40.50.720 6 119 5.5E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00835 c87c35d952c59c924e5b4eee64c7fb66 329 SUPERFAMILY SSF51735 106 294 1.47E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.8E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 SUPERFAMILY SSF102735 1 129 2.09E-37 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 SUPERFAMILY SSF54534 88 243 1.96E-31 T 22-04-2016 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Hamap MF_00303 Trigger factor [tig]. 1 424 21.774 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 239 2.0E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Gene3D G3DSA:1.10.3120.10 215 393 4.8E-50 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 TIGRFAM TIGR00115 tig: trigger factor 11 418 5.6E-129 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 PIRSF PIRSF003095 1 440 5.0E-133 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 PANTHER PTHR30560 1 436 7.5E-108 T 22-04-2016 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 SUPERFAMILY SSF109998 250 435 5.4E-46 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 419 6.1E-42 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Gene3D G3DSA:3.10.50.40 155 214 4.1E-5 T 22-04-2016 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 Gene3D G3DSA:3.30.70.1050 1 116 1.3E-34 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK58_RS06085 c7759293ff702d2f84b92592e62aea8a 444 PANTHER PTHR30560:SF3 1 436 7.5E-108 T 22-04-2016 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 Gene3D G3DSA:1.10.10.10 1 86 1.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 SUPERFAMILY SSF53850 88 293 2.9E-41 T 22-04-2016 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 Gene3D G3DSA:3.40.190.10 175 258 1.6E-10 T 22-04-2016 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 SUPERFAMILY SSF46785 1 111 3.98E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 Pfam PF03466 LysR substrate binding domain 87 290 1.1E-37 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 PANTHER PTHR30537 1 293 1.4E-87 T 22-04-2016 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 PANTHER PTHR30537:SF5 1 293 1.4E-87 T 22-04-2016 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-24 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS12110 261044bee09db73c754f98a8ea960720 296 Gene3D G3DSA:3.40.190.10 91 174 2.9E-24 T 22-04-2016 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PANTHER PTHR11482:SF6 78 411 9.9E-84 T 22-04-2016 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 SUPERFAMILY SSF51419 47 295 2.18E-49 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 235 251 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 Gene3D G3DSA:2.40.37.10 281 407 1.4E-27 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 96 1.75E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 284 303 1.75E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 99 111 1.75E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 385 398 1.75E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 203 216 1.75E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 SUPERFAMILY SSF50621 277 408 7.74E-28 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PANTHER PTHR11482 78 411 9.9E-84 T 22-04-2016 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 Gene3D G3DSA:3.20.20.10 57 280 1.4E-48 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01182 Ornithine decarboxylase signature 372 385 1.3E-8 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01182 Ornithine decarboxylase signature 315 328 1.3E-8 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01182 Ornithine decarboxylase signature 351 361 1.3E-8 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 PRINTS PR01182 Ornithine decarboxylase signature 76 103 1.3E-8 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 294 1.2E-40 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 78 96 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMK58_RS08120 ed408efa64c7c0f526c1165bb3c73e04 424 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 299 404 1.1E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 SUPERFAMILY SSF118116 440 630 2.09E-60 T 22-04-2016 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 125 9.0E-11 T 22-04-2016 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Gene3D G3DSA:3.30.565.10 2 200 1.7E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 SUPERFAMILY SSF55874 1 199 1.44E-51 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 SMART SM01340 212 330 1.1E-55 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Gene3D G3DSA:3.30.230.10 217 329 4.0E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 628 27.94 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 SMART SM00853 445 588 1.8E-53 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Pfam PF08676 MutL C terminal dimerisation domain 441 588 2.0E-48 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.1E-87 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 6.9E-36 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 SUPERFAMILY SSF54211 208 330 4.93E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS11025 2fd92b9bbd2ab0fd81b50c285442358b 631 PANTHER PTHR10073 3 631 4.1E-155 T 22-04-2016 AMK58_RS09280 26fe9e9f9f618ec029baa5f97b6638bd 240 PANTHER PTHR30625:SF3 16 237 6.3E-59 T 22-04-2016 AMK58_RS09280 26fe9e9f9f618ec029baa5f97b6638bd 240 TIGRFAM TIGR02796 tolQ: protein TolQ 20 232 4.3E-84 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AMK58_RS09280 26fe9e9f9f618ec029baa5f97b6638bd 240 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 220 2.3E-40 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMK58_RS09280 26fe9e9f9f618ec029baa5f97b6638bd 240 PANTHER PTHR30625 16 237 6.3E-59 T 22-04-2016 AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 16 509 6.4E-14 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 Gene3D G3DSA:3.40.50.300 406 498 5.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 Gene3D G3DSA:3.40.50.300 1 206 8.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 SUPERFAMILY SSF52540 324 499 1.75E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 SUPERFAMILY SSF52540 3 50 1.75E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.3E-139 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 PANTHER PTHR11059 2 553 5.5E-144 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 SUPERFAMILY SSF52540 1 217 3.89E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03855 04e6d48942b93553a79adc0323dfcaaf 556 PIRSF PIRSF003128 1 555 1.3E-152 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 PANTHER PTHR10314 7 319 1.5E-172 T 22-04-2016 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 PANTHER PTHR10314:SF110 7 319 1.5E-172 T 22-04-2016 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 Gene3D G3DSA:3.40.50.1100 145 316 1.3E-72 T 22-04-2016 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 15 315 1.0E-134 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 15 315 4.4E-129 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 303 1.4E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 SUPERFAMILY SSF53686 9 315 1.7E-99 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS01080 8a967f51855f37669678edc02647ad30 319 Gene3D G3DSA:3.40.50.1100 47 144 4.8E-40 T 22-04-2016 AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 SUPERFAMILY SSF75217 133 284 1.52E-32 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 47 118 1.1E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 PANTHER PTHR12029 32 285 8.2E-46 T 22-04-2016 AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 SUPERFAMILY SSF55315 43 117 1.18E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 Gene3D G3DSA:3.40.1280.10 137 285 9.8E-37 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 Gene3D G3DSA:3.30.1330.30 47 117 1.3E-7 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 Pfam PF00588 SpoU rRNA Methylase family 139 281 2.4E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK58_RS03425 218046683af115438e08d1ad0a14c0f5 288 SMART SM00967 46 121 2.6E-9 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 PANTHER PTHR18895 93 307 1.3E-28 T 22-04-2016 AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 Pfam PF08468 Methyltransferase small domain N-terminal 67 159 1.7E-8 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 PANTHER PTHR18895:SF70 93 307 1.3E-28 T 22-04-2016 AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 Pfam PF05175 Methyltransferase small domain 173 337 1.3E-36 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 SUPERFAMILY SSF53335 182 308 3.32E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07445 9f6acb9fa65f559724526da982ba7db2 342 Gene3D G3DSA:3.40.50.150 193 317 1.6E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 Pfam PF03167 Uracil DNA glycosylase superfamily 32 186 4.0E-23 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 PANTHER PTHR42160:SF1 1 197 6.1E-76 T 22-04-2016 AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 PANTHER PTHR42160 1 197 6.1E-76 T 22-04-2016 AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 SUPERFAMILY SSF52141 4 193 2.39E-57 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 Gene3D G3DSA:3.40.470.10 4 193 1.8E-45 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 SMART SM00986 29 187 3.9E-29 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS01460 15b606866bb738933366b9d144ec8d92 199 SMART SM00987 29 187 3.9E-29 T 22-04-2016 AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 197 8.6E-5 T 22-04-2016 AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 Gene3D G3DSA:3.40.50.720 3 235 2.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 SUPERFAMILY SSF51735 3 228 6.38E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PANTHER PTHR24322:SF413 11 139 3.8E-59 T 22-04-2016 AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PANTHER PTHR24322:SF413 155 184 3.8E-59 T 22-04-2016 AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 Pfam PF00106 short chain dehydrogenase 7 197 2.8E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PANTHER PTHR24322 11 139 3.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PANTHER PTHR24322 155 184 3.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS04970 a744e0496d3c43f017eccd2e990f62d2 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 PANTHER PTHR30437 1 151 3.6E-66 T 22-04-2016 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 SUPERFAMILY SSF46557 1 73 6.93E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 Gene3D G3DSA:3.10.50.30 71 151 3.0E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 149 9.0E-62 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 7.0E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 PIRSF PIRSF006092 1 152 1.4E-54 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 78 150 4.2E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 SUPERFAMILY SSF54534 76 150 3.01E-23 T 22-04-2016 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 150 32.219 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMK58_RS03365 60ebec7295902ea72c003bf9a585faa0 152 Gene3D G3DSA:1.10.287.180 1 70 1.1E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 SUPERFAMILY SSF56784 36 226 9.63E-21 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 Gene3D G3DSA:3.40.50.1000 115 229 6.9E-25 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 36 222 9.6E-20 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 PANTHER PTHR10000 128 229 5.3E-13 T 22-04-2016 AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 37 231 3.7E-32 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 PANTHER PTHR10000:SF10 128 229 5.3E-13 T 22-04-2016 AMK58_RS01145 0e138b5d3e3f15162f518c8b68a1d670 232 Pfam PF12710 haloacid dehalogenase-like hydrolase 37 220 4.4E-30 T 22-04-2016 AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 Gene3D G3DSA:1.10.1510.10 2 94 8.8E-27 T 22-04-2016 AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 PANTHER PTHR28055:SF1 1 153 4.7E-43 T 22-04-2016 AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 PANTHER PTHR28055 1 153 4.7E-43 T 22-04-2016 AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 Gene3D G3DSA:1.10.10.410 95 151 1.5E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 Pfam PF09424 Yqey-like protein 4 150 1.6E-47 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial AMK58_RS09860 294490ccc95104020bcf7d890a090aa2 153 SUPERFAMILY SSF89095 2 151 1.31E-38 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMK58_RS09215 468180573d3ab7af7ad645eaa892af36 309 Pfam PF00892 EamA-like transporter family 158 291 9.0E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS09215 468180573d3ab7af7ad645eaa892af36 309 Pfam PF00892 EamA-like transporter family 10 144 1.2E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS09215 468180573d3ab7af7ad645eaa892af36 309 PANTHER PTHR22911 7 296 1.2E-32 T 22-04-2016 AMK58_RS09215 468180573d3ab7af7ad645eaa892af36 309 PANTHER PTHR22911:SF23 7 296 1.2E-32 T 22-04-2016 AMK58_RS09215 468180573d3ab7af7ad645eaa892af36 309 SUPERFAMILY SSF103481 192 294 3.27E-12 T 22-04-2016 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 SUPERFAMILY SSF52540 282 528 1.42E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 270 4.4E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 508 540 4.6E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 SUPERFAMILY SSF52540 9 260 2.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 PANTHER PTHR24220:SF574 11 414 3.1E-189 T 22-04-2016 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Gene3D G3DSA:3.40.50.300 8 262 3.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Gene3D G3DSA:3.40.50.300 282 530 5.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 SMART SM00382 315 506 2.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 SMART SM00382 38 238 6.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 PANTHER PTHR24220 11 414 3.1E-189 T 22-04-2016 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Pfam PF00005 ABC transporter 307 457 7.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS11965 feb0c3a6a283797e81afcbae06d310a2 545 Pfam PF00005 ABC transporter 30 188 2.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 Pfam PF01636 Phosphotransferase enzyme family 150 308 5.7E-6 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 SUPERFAMILY SSF56112 133 307 1.22E-13 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 PANTHER PTHR33540:SF1 137 229 6.6E-14 T 22-04-2016 AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 Gene3D G3DSA:3.30.200.20 129 218 5.8E-27 T 22-04-2016 AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 Gene3D G3DSA:3.90.1200.10 220 318 1.6E-8 T 22-04-2016 AMK58_RS26430 71a50ac6445f01a1e2ec5cbfb942a07a 319 PANTHER PTHR33540 137 229 6.6E-14 T 22-04-2016 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 Gene3D G3DSA:1.10.150.120 77 161 1.9E-36 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 Pfam PF01799 [2Fe-2S] binding domain 75 148 2.6E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 PANTHER PTHR11908 1 141 4.2E-47 T 22-04-2016 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 SUPERFAMILY SSF54292 4 80 9.7E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 61 2.5E-5 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 SUPERFAMILY SSF47741 87 159 5.63E-34 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK58_RS07570 42a021fbc9ffe3b6189e7349d51f0092 165 Gene3D G3DSA:3.10.20.30 4 76 2.6E-28 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 Pfam PF08447 PAS fold 53 135 1.2E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PANTHER PTHR32089 152 431 1.6E-106 T 22-04-2016 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 249 428 2.9E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 SUPERFAMILY SSF55785 54 149 4.19E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 2.2E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 223 2.2E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 349 378 2.2E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 299 2.2E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 Gene3D G3DSA:1.10.287.950 197 399 1.3E-45 T 22-04-2016 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 Gene3D G3DSA:3.30.450.20 17 148 1.3E-14 T 22-04-2016 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 PANTHER PTHR32089:SF40 152 431 1.6E-106 T 22-04-2016 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 SUPERFAMILY SSF58104 158 427 1.02E-60 T 22-04-2016 AMK58_RS00565 b0cabcdf0d43d3b07f6a7c19cd6feb6b 434 SMART SM00283 170 428 5.1E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PIRSF PIRSF004749 1 168 4.3E-62 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PANTHER PTHR10458:SF10 1 167 1.6E-72 T 22-04-2016 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 Pfam PF01327 Polypeptide deformylase 4 155 2.4E-56 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 Gene3D G3DSA:3.90.45.10 5 167 1.8E-67 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 162 1.4E-59 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PANTHER PTHR10458 1 167 1.6E-72 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PRINTS PR01576 Peptide deformylase signature 104 122 7.45E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PRINTS PR01576 Peptide deformylase signature 92 103 7.45E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PRINTS PR01576 Peptide deformylase signature 33 62 7.45E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 PRINTS PR01576 Peptide deformylase signature 123 152 7.45E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.96 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS12190 e440a0211187feec4768660b9b4d7623 168 SUPERFAMILY SSF56420 2 167 8.37E-65 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS12745 0b638d7e6a1621ca63739a5af3139bc2 284 SMART SM00850 185 278 8.8E-19 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMK58_RS12745 0b638d7e6a1621ca63739a5af3139bc2 284 Gene3D G3DSA:2.40.50.40 190 237 7.6E-4 T 22-04-2016 AMK58_RS12745 0b638d7e6a1621ca63739a5af3139bc2 284 Pfam PF04397 LytTr DNA-binding domain 190 276 3.5E-17 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMK58_RS12745 0b638d7e6a1621ca63739a5af3139bc2 284 Gene3D G3DSA:2.20.25.10 251 275 8.1E-5 T 22-04-2016 AMK58_RS10795 049abe55cf632329d69c448e11ad2f10 258 PANTHER PTHR39167 128 254 5.4E-22 T 22-04-2016 AMK58_RS10795 049abe55cf632329d69c448e11ad2f10 258 SUPERFAMILY SSF48371 85 254 5.76E-35 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK58_RS10795 049abe55cf632329d69c448e11ad2f10 258 Gene3D G3DSA:1.25.10.10 39 237 1.3E-4 T 22-04-2016 IPR011989 Armadillo-like helical AMK58_RS10795 049abe55cf632329d69c448e11ad2f10 258 Pfam PF13646 HEAT repeats 85 169 2.0E-6 T 22-04-2016 AMK58_RS03050 76fd2fc394a05dda44deef16df4e41d0 78 Pfam PF13467 Ribbon-helix-helix domain 1 48 1.2E-16 T 22-04-2016 IPR027373 Ribbon-helix-helix domain AMK58_RS08895 b557426f33102324886871347e88aafd 144 PANTHER PTHR37164 5 144 1.9E-15 T 22-04-2016 AMK58_RS08895 b557426f33102324886871347e88aafd 144 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 129 3.3E-23 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08895 b557426f33102324886871347e88aafd 144 Pfam PF01814 Hemerythrin HHE cation binding domain 18 98 9.7E-7 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS08895 b557426f33102324886871347e88aafd 144 Gene3D G3DSA:1.20.120.50 5 129 9.1E-24 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08895 b557426f33102324886871347e88aafd 144 SUPERFAMILY SSF47188 5 131 3.66E-22 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 Pfam PF13641 Glycosyltransferase like family 2 419 648 2.0E-36 T 22-04-2016 AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 SUPERFAMILY SSF51445 38 297 2.05E-46 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 Gene3D G3DSA:3.20.20.80 52 298 7.0E-33 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 PANTHER PTHR10587:SF64 321 589 1.1E-55 T 22-04-2016 AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 Gene3D G3DSA:3.90.550.10 419 663 1.9E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 PANTHER PTHR10587 321 589 1.1E-55 T 22-04-2016 AMK58_RS08450 2f3ca1b03d14357014b2069ef73698e7 869 SUPERFAMILY SSF53448 412 675 8.63E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 Hamap MF_00219 Dihydroorotase [pyrC]. 4 348 45.856 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 Pfam PF01979 Amidohydrolase family 13 307 6.6E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 PANTHER PTHR11647:SF59 4 319 3.0E-153 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 6 346 3.2E-134 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 PIRSF PIRSF001237 2 350 1.4E-134 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 ProSitePatterns PS00482 Dihydroorotase signature 1. 13 21 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 PANTHER PTHR11647 4 319 3.0E-153 T 22-04-2016 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 SUPERFAMILY SSF51556 4 346 4.66E-139 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 Gene3D G3DSA:3.20.20.140 4 347 1.3E-128 T 22-04-2016 AMK58_RS11340 f70f1dcb274e83b2057c89b239c7689d 352 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 SMART SM00932 193 253 1.3E-22 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 SUPERFAMILY SSF110836 191 253 4.58E-21 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 193 253 1.8E-21 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 Gene3D G3DSA:3.30.1370.70 190 253 8.7E-25 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 PANTHER PTHR11178 190 253 9.7E-30 T 22-04-2016 AMK58_RS28400 a7f9c696b709ac9fe735f5bf86d6406a 253 PANTHER PTHR11178:SF1 190 253 9.7E-30 T 22-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 SUPERFAMILY SSF47413 16 88 1.36E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 PANTHER PTHR10245 20 84 2.9E-27 T 22-04-2016 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 SMART SM00530 27 82 3.0E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 Pfam PF01381 Helix-turn-helix 29 81 1.2E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 Gene3D G3DSA:1.10.260.40 24 84 5.0E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS04190 64e3bf6bbc25aebb71a83c8ac711ab6d 90 PANTHER PTHR10245:SF38 20 84 2.9E-27 T 22-04-2016 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 Hamap MF_00163 Peptide deformylase [def]. 2 169 27.521 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 Pfam PF01327 Polypeptide deformylase 5 157 6.7E-48 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PANTHER PTHR10458 1 157 1.9E-62 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PIRSF PIRSF004749 1 179 1.1E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PRINTS PR01576 Peptide deformylase signature 108 126 1.9E-31 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PRINTS PR01576 Peptide deformylase signature 34 63 1.9E-31 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PRINTS PR01576 Peptide deformylase signature 96 107 1.9E-31 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 PRINTS PR01576 Peptide deformylase signature 127 156 1.9E-31 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 162 7.6E-39 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 Gene3D G3DSA:3.90.45.10 5 172 1.2E-56 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS05410 39bf8f085080202e133bd51e348c354a 180 SUPERFAMILY SSF56420 1 165 8.51E-57 T 22-04-2016 IPR023635 Peptide deformylase AMK58_RS10815 39a9799bd88bd49070fa6eb2a6b86fc8 451 Pfam PF01523 Putative modulator of DNA gyrase 30 320 7.6E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS10815 39a9799bd88bd49070fa6eb2a6b86fc8 451 SUPERFAMILY SSF111283 11 450 8.63E-129 T 22-04-2016 AMK58_RS10815 39a9799bd88bd49070fa6eb2a6b86fc8 451 PANTHER PTHR30624 3 451 1.8E-138 T 22-04-2016 AMK58_RS10815 39a9799bd88bd49070fa6eb2a6b86fc8 451 PANTHER PTHR30624:SF1 3 451 1.8E-138 T 22-04-2016 AMK58_RS09770 f2490440ba21c630c579b09531e26a9c 115 Pfam PF01042 Endoribonuclease L-PSP 11 114 5.8E-26 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family AMK58_RS09770 f2490440ba21c630c579b09531e26a9c 115 SUPERFAMILY SSF55298 2 114 1.49E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK58_RS09770 f2490440ba21c630c579b09531e26a9c 115 Gene3D G3DSA:3.30.1330.40 11 114 1.1E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK58_RS09770 f2490440ba21c630c579b09531e26a9c 115 PANTHER PTHR11803 11 114 3.8E-36 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family AMK58_RS09770 f2490440ba21c630c579b09531e26a9c 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 109 - T 22-04-2016 IPR019897 RidA, conserved site AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 PANTHER PTHR30002:SF4 1 354 6.6E-145 T 22-04-2016 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 5 312 46.874 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 Pfam PF13484 4Fe-4S double cluster binding domain 189 253 1.5E-19 T 22-04-2016 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 SUPERFAMILY SSF46548 136 253 2.72E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 Gene3D G3DSA:3.30.70.20 188 256 6.9E-7 T 22-04-2016 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 12 348 4.9E-140 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 PANTHER PTHR30002 1 354 6.6E-145 T 22-04-2016 AMK58_RS05255 02a19d2e45c2488830c6c8b4c1101aee 357 Pfam PF08331 Domain of unknown function (DUF1730) 61 137 3.4E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS03195 d2b661c9e6138adef3de6c4f219abc24 292 PANTHER PTHR11795 2 289 1.6E-83 T 22-04-2016 AMK58_RS03195 d2b661c9e6138adef3de6c4f219abc24 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 276 1.5E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS21740 5aee368f89365b20945972c92188cf00 129 Gene3D G3DSA:2.160.10.10 55 126 1.1E-6 T 22-04-2016 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 Gene3D G3DSA:2.30.30.100 212 256 2.5E-6 T 22-04-2016 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 PANTHER PTHR12835 17 258 9.9E-62 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 Pfam PF02237 Biotin protein ligase C terminal domain 212 258 5.1E-9 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 SUPERFAMILY SSF50037 214 258 3.3E-5 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 20 256 4.3E-46 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 Pfam PF16917 Biotin/lipoate A/B protein ligase family 68 206 2.9E-17 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 Gene3D G3DSA:3.30.930.10 14 208 1.4E-59 T 22-04-2016 AMK58_RS06190 d71a4da002b6a9984d7b41dcd6788522 264 SUPERFAMILY SSF55681 12 208 1.62E-53 T 22-04-2016 AMK58_RS01570 d42fb3b1842bd7542d978d8b68222b52 259 PANTHER PTHR22572 21 249 1.8E-43 T 22-04-2016 AMK58_RS01570 d42fb3b1842bd7542d978d8b68222b52 259 PANTHER PTHR22572:SF15 21 249 1.8E-43 T 22-04-2016 AMK58_RS01570 d42fb3b1842bd7542d978d8b68222b52 259 Gene3D G3DSA:3.90.550.10 17 250 1.0E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01570 d42fb3b1842bd7542d978d8b68222b52 259 Pfam PF12804 MobA-like NTP transferase domain 22 151 1.5E-16 T 22-04-2016 IPR025877 MobA-like NTP transferase AMK58_RS01570 d42fb3b1842bd7542d978d8b68222b52 259 SUPERFAMILY SSF53448 19 249 5.18E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 65 162 7.9E-43 T 22-04-2016 IPR012997 Rare lipoprotein A AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 Pfam PF05036 Sporulation related domain 241 302 6.4E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 Pfam PF03330 Lytic transglycolase 63 152 8.6E-24 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 SUPERFAMILY SSF110997 239 312 1.02E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 PANTHER PTHR34183:SF1 40 314 4.4E-70 T 22-04-2016 AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 PANTHER PTHR34183 40 314 4.4E-70 T 22-04-2016 AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 SUPERFAMILY SSF50685 57 152 2.89E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 Gene3D G3DSA:3.30.70.1070 239 309 1.8E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS07780 5f7cf0fba49c58ef6978a696cf87a019 314 Gene3D G3DSA:2.40.40.10 102 153 4.3E-4 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS10215 dbf4e9dd762b69440469295d9dfc0b41 114 Gene3D G3DSA:1.10.10.10 17 96 3.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10215 dbf4e9dd762b69440469295d9dfc0b41 114 Pfam PF06627 Protein of unknown function (DUF1153) 16 96 6.7E-39 T 22-04-2016 IPR009534 Protein of unknown function DUF1153 AMK58_RS10215 dbf4e9dd762b69440469295d9dfc0b41 114 SUPERFAMILY SSF48295 17 96 3.56E-20 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK58_RS09020 a807903a39a9a1f248ffe91f4504ed10 279 Pfam PF13649 Methyltransferase domain 55 152 5.3E-18 T 22-04-2016 AMK58_RS09020 a807903a39a9a1f248ffe91f4504ed10 279 PANTHER PTHR10108 18 216 3.4E-28 T 22-04-2016 AMK58_RS09020 a807903a39a9a1f248ffe91f4504ed10 279 SUPERFAMILY SSF53335 17 239 5.37E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09020 a807903a39a9a1f248ffe91f4504ed10 279 Gene3D G3DSA:3.40.50.150 18 259 1.6E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11590 ce899059be98ca73c9952431279adb5b 392 PANTHER PTHR22935 11 392 7.5E-60 T 22-04-2016 AMK58_RS11590 ce899059be98ca73c9952431279adb5b 392 SUPERFAMILY SSF56601 30 370 4.4E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11590 ce899059be98ca73c9952431279adb5b 392 Gene3D G3DSA:3.40.710.10 30 380 5.2E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS11590 ce899059be98ca73c9952431279adb5b 392 Pfam PF00144 Beta-lactamase 38 370 1.3E-53 T 22-04-2016 IPR001466 Beta-lactamase-related AMK58_RS04005 3971318040eee7ce1d7eea4fed3cbe5f 1202 PANTHER PTHR11365:SF2 4 1199 0.0 T 22-04-2016 AMK58_RS04005 3971318040eee7ce1d7eea4fed3cbe5f 1202 Pfam PF02538 Hydantoinase B/oxoprolinase 695 1199 6.7E-211 T 22-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 AMK58_RS04005 3971318040eee7ce1d7eea4fed3cbe5f 1202 Pfam PF01968 Hydantoinase/oxoprolinase 209 496 1.6E-115 T 22-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 AMK58_RS04005 3971318040eee7ce1d7eea4fed3cbe5f 1202 PANTHER PTHR11365 4 1199 0.0 T 22-04-2016 AMK58_RS04005 3971318040eee7ce1d7eea4fed3cbe5f 1202 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 11 190 1.9E-60 T 22-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 PANTHER PTHR33796 2 208 2.2E-56 T 22-04-2016 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 SUPERFAMILY SSF50249 1 62 2.91E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Gene3D G3DSA:2.40.50.140 1 64 1.3E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Gene3D G3DSA:1.10.150.20 67 136 2.3E-26 T 22-04-2016 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 SUPERFAMILY SSF47781 65 133 2.07E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 SUPERFAMILY SSF46929 160 207 1.96E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.6E-12 T 22-04-2016 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 186 1.3E-35 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Gene3D G3DSA:1.10.8.10 160 206 1.2E-9 T 22-04-2016 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 207 27.335 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Pfam PF07499 RuvA, C-terminal domain 160 207 4.4E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 Pfam PF01330 RuvA N terminal domain 1 61 1.3E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 SMART SM00278 72 91 100.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS09295 8cce288396c7a2794dde5a089ce68430 208 SMART SM00278 107 126 4.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 SUPERFAMILY SSF52172 43 192 1.85E-13 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 274 7.3E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 Gene3D G3DSA:3.40.50.2300 46 172 1.1E-13 T 22-04-2016 AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 SMART SM00091 195 261 4.4E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 Pfam PF00989 PAS fold 195 258 1.6E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 SUPERFAMILY SSF55785 185 275 1.27E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 Gene3D G3DSA:3.30.450.20 186 275 3.3E-15 T 22-04-2016 AMK58_RS27200 0e61a95208216428a69b23f2772d9961 275 Pfam PF00072 Response regulator receiver domain 46 154 4.1E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 SMART SM00859 4 120 1.4E-35 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 333 32.392 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 335 1.2E-120 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 SUPERFAMILY SSF51735 3 158 9.37E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 SUPERFAMILY SSF55347 133 320 1.37E-66 T 22-04-2016 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 PIRSF PIRSF000148 2 337 6.0E-116 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 PANTHER PTHR10174 56 337 1.1E-66 T 22-04-2016 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 1.3E-29 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 Gene3D G3DSA:3.40.50.720 2 144 1.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 Gene3D G3DSA:3.30.360.10 145 315 2.5E-71 T 22-04-2016 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 319 4.9E-50 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 230 244 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS02660 14fc9cf3fefb48fb5df21e3bd318a95b 339 PANTHER PTHR10174:SF2 56 337 1.1E-66 T 22-04-2016 AMK58_RS11265 fcae1436eee8ba1dab7785d48b46e741 235 PIRSF PIRSF029950 1 235 6.2E-83 T 22-04-2016 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 AMK58_RS11265 fcae1436eee8ba1dab7785d48b46e741 235 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 46 3.5E-16 T 22-04-2016 IPR013422 CRISPR-associated protein Cas5, N-terminal AMK58_RS11265 fcae1436eee8ba1dab7785d48b46e741 235 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 7 234 4.0E-48 T 22-04-2016 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 AMK58_RS11265 fcae1436eee8ba1dab7785d48b46e741 235 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 222 2.0E-39 T 22-04-2016 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 AMK58_RS03435 57ed87cdfb1a519482c6409a763a627c 192 PANTHER PTHR30353 21 192 1.6E-13 T 22-04-2016 IPR032818 DedA family AMK58_RS03435 57ed87cdfb1a519482c6409a763a627c 192 Pfam PF09335 SNARE associated Golgi protein 38 155 9.1E-10 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 Pfam PF05175 Methyltransferase small domain 144 226 6.8E-19 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 10 311 49.028 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 SUPERFAMILY SSF53335 20 294 1.19E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 215 221 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 17 306 1.7E-118 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 PANTHER PTHR18895:SF66 16 309 3.2E-129 T 22-04-2016 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 PANTHER PTHR18895 16 309 3.2E-129 T 22-04-2016 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 Gene3D G3DSA:3.40.50.150 141 298 4.9E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 PIRSF PIRSF037167 5 313 2.4E-118 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMK58_RS09895 99d1c947e8ded7f2b32288a235500b8a 313 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 19 297 3.9E-65 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 PANTHER PTHR11609 3 358 4.0E-126 T 22-04-2016 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 Gene3D G3DSA:3.30.1490.20 123 186 1.0E-19 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 SUPERFAMILY SSF51246 311 358 1.26E-13 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 Pfam PF02222 ATP-grasp domain 118 286 1.5E-58 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 360 40.93 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 SUPERFAMILY SSF56059 108 305 6.36E-63 T 22-04-2016 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 SUPERFAMILY SSF52440 5 103 2.16E-21 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 Gene3D G3DSA:3.40.50.20 5 115 3.5E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 Gene3D G3DSA:3.30.470.20 187 356 3.6E-68 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 357 4.1E-115 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMK58_RS05120 b053fa9eecdd57b72621058969d377a2 360 PANTHER PTHR11609:SF5 3 358 4.0E-126 T 22-04-2016 AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 PANTHER PTHR33693 24 195 1.0E-21 T 22-04-2016 AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 SUPERFAMILY SSF52141 19 77 1.02E-29 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 SUPERFAMILY SSF52141 106 193 1.02E-29 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 Gene3D G3DSA:3.40.470.10 20 195 2.3E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 SMART SM00987 15 193 2.8E-14 T 22-04-2016 AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 PANTHER PTHR33693:SF1 24 195 1.0E-21 T 22-04-2016 AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 SMART SM00986 15 193 2.8E-14 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 Pfam PF03167 Uracil DNA glycosylase superfamily 20 88 6.4E-16 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS04480 6cd375523e24ec30ac831a10db3bfd89 201 Pfam PF03167 Uracil DNA glycosylase superfamily 119 191 2.3E-7 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK58_RS13655 41487c500e61d7503411831eba5bcdd2 635 Pfam PF00665 Integrase core domain 236 372 5.2E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK58_RS13655 41487c500e61d7503411831eba5bcdd2 635 Gene3D G3DSA:3.30.420.10 233 428 3.6E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13655 41487c500e61d7503411831eba5bcdd2 635 Pfam PF09299 Mu transposase, C-terminal 460 518 4.0E-13 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal AMK58_RS13655 41487c500e61d7503411831eba5bcdd2 635 SUPERFAMILY SSF53098 233 430 9.71E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Gene3D G3DSA:3.40.50.300 28 185 2.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Gene3D G3DSA:1.10.8.60 191 263 7.3E-28 T 22-04-2016 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 PANTHER PTHR13779 25 341 9.4E-161 T 22-04-2016 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 22 242 2.3E-110 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 SMART SM00382 59 186 5.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 261 334 2.5E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 SUPERFAMILY SSF46785 264 338 2.65E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 67 86 7.1E-5 T 22-04-2016 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 363 7.1E-5 T 22-04-2016 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 32 334 3.0E-134 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 PANTHER PTHR13779:SF25 25 341 9.4E-161 T 22-04-2016 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Gene3D G3DSA:1.10.10.10 265 336 4.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 363 167.22 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 SUPERFAMILY SSF52540 28 259 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09290 9ce0b0cacdba7a86e25e4990926faf60 363 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 259 339 3.0E-26 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 24 278 35.999 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 SUPERFAMILY SSF51366 13 257 1.6E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 PANTHER PTHR10314:SF4 8 61 1.4E-23 T 22-04-2016 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 58 71 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 18 260 8.8E-79 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 PANTHER PTHR10314:SF4 84 140 1.4E-23 T 22-04-2016 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 PANTHER PTHR10314 84 140 1.4E-23 T 22-04-2016 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 PANTHER PTHR10314 8 61 1.4E-23 T 22-04-2016 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 Gene3D G3DSA:3.20.20.70 13 280 8.5E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS01635 be8c28ce896767d491fdff403021d967 284 Pfam PF00290 Tryptophan synthase alpha chain 18 252 1.9E-94 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557:SF1 128 158 0.0 T 22-04-2016 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557:SF1 183 608 0.0 T 22-04-2016 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557:SF1 24 92 0.0 T 22-04-2016 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 Pfam PF13667 ThiC-associated domain 24 94 6.0E-24 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 135 583 9.5E-214 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 586 56.044 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 Pfam PF01964 Radical SAM ThiC family 136 581 5.3E-200 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557 128 158 0.0 T 22-04-2016 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557 183 608 0.0 T 22-04-2016 AMK58_RS06955 e078e33f2552210168a8e431643a185e 613 PANTHER PTHR30557 24 92 0.0 T 22-04-2016 AMK58_RS19895 1176d547fa2f66d302cd739ed817ab19 64 Gene3D G3DSA:1.10.287.610 4 38 5.1E-9 T 22-04-2016 AMK58_RS19895 1176d547fa2f66d302cd739ed817ab19 64 Gene3D G3DSA:3.40.50.10490 41 64 4.4E-5 T 22-04-2016 AMK58_RS19895 1176d547fa2f66d302cd739ed817ab19 64 PANTHER PTHR12534 3 64 4.1E-14 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK58_RS19895 1176d547fa2f66d302cd739ed817ab19 64 SUPERFAMILY SSF52313 10 64 3.66E-15 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AMK58_RS19895 1176d547fa2f66d302cd739ed817ab19 64 Pfam PF00318 Ribosomal protein S2 4 64 6.3E-15 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 PANTHER PTHR35936 1 254 4.1E-29 T 22-04-2016 AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 250 4.4E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 Gene3D G3DSA:3.40.190.10 209 251 3.0E-10 T 22-04-2016 AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 Gene3D G3DSA:3.40.190.10 29 102 3.0E-10 T 22-04-2016 AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 SMART SM00062 28 253 3.0E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 Gene3D G3DSA:3.40.190.10 103 205 1.5E-6 T 22-04-2016 AMK58_RS04215 5c76c4eb8aeb1fd507b32866b7774165 254 SUPERFAMILY SSF53850 31 251 8.54E-33 T 22-04-2016 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 257 441 1.4E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 SUPERFAMILY SSF46458 11 155 1.22E-36 T 22-04-2016 IPR009050 Globin-like AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 Gene3D G3DSA:1.10.490.10 7 156 1.1E-43 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 209 238 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 392 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 313 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 3.3E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PANTHER PTHR32089:SF40 169 445 2.5E-125 T 22-04-2016 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 SMART SM00283 188 442 2.5E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 Pfam PF11563 Protoglobin 8 160 1.4E-38 T 22-04-2016 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 PANTHER PTHR32089 169 445 2.5E-125 T 22-04-2016 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 Gene3D G3DSA:1.10.287.950 203 412 3.2E-47 T 22-04-2016 AMK58_RS07920 468efcb5824bf847d7760141e4c10085 448 SUPERFAMILY SSF58104 167 441 1.83E-65 T 22-04-2016 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Gene3D G3DSA:3.40.50.20 6 91 2.2E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Gene3D G3DSA:3.30.1490.20 103 177 5.3E-8 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 8 311 2.2E-77 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Pfam PF01820 D-ala D-ala ligase N-terminus 9 91 4.1E-23 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 70 81 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Pfam PF07478 D-ala D-ala ligase C-terminus 138 309 6.2E-38 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 PANTHER PTHR23132 9 312 1.4E-73 T 22-04-2016 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 SUPERFAMILY SSF52440 6 103 3.07E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Gene3D G3DSA:3.30.470.20 178 311 8.9E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Gene3D G3DSA:3.30.470.20 93 102 8.9E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 7 312 33.695 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS03905 d89a0feb67053e145925706562fb4873 316 SUPERFAMILY SSF56059 103 310 1.86E-44 T 22-04-2016 AMK58_RS27870 cdb17bdf89f4ebf1e8ad64116ef90fc5 115 SUPERFAMILY SSF48334 4 113 3.66E-33 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS27870 cdb17bdf89f4ebf1e8ad64116ef90fc5 115 Pfam PF05192 MutS domain III 6 112 7.1E-30 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS27870 cdb17bdf89f4ebf1e8ad64116ef90fc5 115 Gene3D G3DSA:1.10.1420.10 1 114 4.5E-36 T 22-04-2016 AMK58_RS27870 cdb17bdf89f4ebf1e8ad64116ef90fc5 115 PANTHER PTHR11361:SF86 1 115 3.0E-37 T 22-04-2016 AMK58_RS27870 cdb17bdf89f4ebf1e8ad64116ef90fc5 115 PANTHER PTHR11361 1 115 3.0E-37 T 22-04-2016 AMK58_RS05365 820bfdeccc9dc12fcfd2be1997f602b5 193 Gene3D G3DSA:1.20.1510.10 2 174 6.0E-10 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain AMK58_RS05365 820bfdeccc9dc12fcfd2be1997f602b5 193 SUPERFAMILY SSF161111 2 175 2.22E-19 T 22-04-2016 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 SUPERFAMILY SSF56276 32 140 5.49E-34 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 32 139 3.6E-40 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 PANTHER PTHR33866:SF2 33 139 2.6E-37 T 22-04-2016 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 Gene3D G3DSA:3.60.90.10 20 142 7.7E-42 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 Pfam PF02675 S-adenosylmethionine decarboxylase 35 139 2.0E-35 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 29 143 25.595 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS00165 27700de6d7ab43d35eaee128fcfed584 143 PANTHER PTHR33866 33 139 2.6E-37 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Pfam PF03129 Anticodon binding domain 348 436 1.4E-20 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Gene3D G3DSA:3.40.50.800 340 436 1.3E-28 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 223 1.8E-102 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 SUPERFAMILY SSF52954 333 436 1.8E-31 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PANTHER PTHR11451 241 436 1.9E-138 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PANTHER PTHR11451 4 216 1.9E-138 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 SUPERFAMILY SSF55681 277 347 1.41E-93 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 SUPERFAMILY SSF55681 9 236 1.41E-93 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PANTHER PTHR11451:SF3 241 436 1.9E-138 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PANTHER PTHR11451:SF3 4 216 1.9E-138 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 328 2.7E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Gene3D G3DSA:3.30.930.10 6 204 3.1E-98 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Gene3D G3DSA:3.30.930.10 262 338 3.1E-98 T 22-04-2016 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 437 63.132 T 22-04-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.6E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.6E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.6E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS06230 8940a3f140b020c4a4993ffe60328463 437 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.6E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 504 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 506 9.2E-41 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Pfam PF00672 HAMP domain 140 208 1.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SMART SM00304 159 212 1.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 214 344 5.1E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SUPERFAMILY SSF55785 226 344 1.65E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Pfam PF08448 PAS fold 222 337 1.8E-9 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SMART SM00267 337 509 7.5E-63 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SMART SM00091 215 281 7.1E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 PANTHER PTHR10799:SF774 381 619 5.6E-82 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 PANTHER PTHR10799:SF774 196 344 5.6E-82 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Gene3D G3DSA:3.30.450.20 204 335 3.3E-15 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SUPERFAMILY SSF158472 161 207 8.5E-8 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Pfam PF00563 EAL domain 525 759 1.5E-71 T 22-04-2016 IPR001633 EAL domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Gene3D G3DSA:3.30.70.270 350 517 6.3E-53 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SUPERFAMILY SSF55073 353 511 6.2E-46 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 Gene3D G3DSA:3.20.20.450 523 770 2.1E-98 T 22-04-2016 IPR001633 EAL domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 PANTHER PTHR10799 381 619 5.6E-82 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 PANTHER PTHR10799 196 344 5.6E-82 T 22-04-2016 AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SUPERFAMILY SSF141868 525 769 1.05E-86 T 22-04-2016 IPR001633 EAL domain AMK58_RS02950 e7ec987fb074797db98659e0cb510edb 777 SMART SM00052 519 764 1.7E-117 T 22-04-2016 IPR001633 EAL domain AMK58_RS01470 5c84ffc898149630746f56b5b10796db 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 20.152 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS01470 5c84ffc898149630746f56b5b10796db 100 SUPERFAMILY SSF55248 2 95 1.22E-28 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS01470 5c84ffc898149630746f56b5b10796db 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 94 4.3E-26 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS01470 5c84ffc898149630746f56b5b10796db 100 Gene3D G3DSA:3.30.1360.20 3 95 3.5E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS01470 5c84ffc898149630746f56b5b10796db 100 PANTHER PTHR12599 5 95 1.6E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 PANTHER PTHR10584 5 316 3.2E-101 T 22-04-2016 AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 Gene3D G3DSA:3.40.1190.20 6 325 9.5E-68 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 SUPERFAMILY SSF53613 6 318 2.18E-76 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 PANTHER PTHR10584:SF153 5 316 3.2E-101 T 22-04-2016 AMK58_RS00625 dde5baa996a53036d78dac384fa7e53d 332 Pfam PF00294 pfkB family carbohydrate kinase 58 316 1.1E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK58_RS03010 a2f033c37d78cfa38d113c2dcef6311d 125 SUPERFAMILY SSF56399 5 113 8.06E-37 T 22-04-2016 AMK58_RS03010 a2f033c37d78cfa38d113c2dcef6311d 125 PANTHER PTHR34129 1 119 3.2E-28 T 22-04-2016 AMK58_RS03010 a2f033c37d78cfa38d113c2dcef6311d 125 PANTHER PTHR34129:SF1 1 119 3.2E-28 T 22-04-2016 AMK58_RS03010 a2f033c37d78cfa38d113c2dcef6311d 125 Pfam PF06108 Protein of unknown function (DUF952) 10 97 2.7E-31 T 22-04-2016 IPR009297 Protein of unknown function DUF952 AMK58_RS02805 92f36c99643fc0b2cc439728c9bbde39 214 SUPERFAMILY SSF52799 73 163 5.22E-9 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMK58_RS02805 92f36c99643fc0b2cc439728c9bbde39 214 Gene3D G3DSA:3.90.190.10 72 147 9.9E-7 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 249 1.6E-7 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 PRINTS PR00982 Lysyl-tRNA synthetase signature 103 120 1.6E-7 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 PRINTS PR00982 Lysyl-tRNA synthetase signature 35 45 1.6E-7 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 PANTHER PTHR22594:SF7 20 348 1.3E-114 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 Pfam PF00152 tRNA synthetases class II (D, K and N) 19 346 1.2E-39 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 PANTHER PTHR22594 20 348 1.3E-114 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 Gene3D G3DSA:3.30.930.10 19 346 6.5E-74 T 22-04-2016 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 SUPERFAMILY SSF55681 17 347 1.31E-76 T 22-04-2016 AMK58_RS09385 c30efd11a79c6996fddfee67bba38d71 350 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 22 344 1.5E-115 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 Pfam PF08022 FAD-binding domain 237 314 1.1E-6 T 22-04-2016 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 PRINTS PR00409 Phthalate dioxygenase reductase family signature 326 345 7.2E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 PRINTS PR00409 Phthalate dioxygenase reductase family signature 410 418 7.2E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 PRINTS PR00409 Phthalate dioxygenase reductase family signature 304 318 7.2E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 SUPERFAMILY SSF52343 320 443 7.6E-19 T 22-04-2016 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 PANTHER PTHR11972:SF23 1 445 2.9E-39 T 22-04-2016 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 Pfam PF01794 Ferric reductase like transmembrane component 44 177 5.7E-19 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 PANTHER PTHR11972 1 445 2.9E-39 T 22-04-2016 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 Gene3D G3DSA:3.40.50.80 318 442 1.0E-13 T 22-04-2016 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 Gene3D G3DSA:2.40.30.10 237 317 3.1E-11 T 22-04-2016 AMK58_RS07875 3b2522568f020c1cf63128ea525462d9 446 SUPERFAMILY SSF63380 237 317 6.81E-14 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK58_RS08620 73ff32cc2157f5fb826fbbaa2b2b14ca 461 PANTHER PTHR21337 3 461 0.0 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS08620 73ff32cc2157f5fb826fbbaa2b2b14ca 461 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 448 7.9E-225 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS08620 73ff32cc2157f5fb826fbbaa2b2b14ca 461 Pfam PF01474 Class-II DAHP synthetase family 5 442 9.4E-207 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS08620 73ff32cc2157f5fb826fbbaa2b2b14ca 461 SUPERFAMILY SSF51569 2 446 3.0E-206 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 Pfam PF00027 Cyclic nucleotide-binding domain 43 127 1.3E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 Gene3D G3DSA:1.10.10.10 159 237 3.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 SMART SM00419 180 228 8.5E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 Pfam PF13545 Crp-like helix-turn-helix domain 162 235 2.7E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 91 108 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 SUPERFAMILY SSF46785 159 236 2.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 PANTHER PTHR24567 13 237 3.5E-64 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 PRINTS PR00103 cAMP-dependent protein kinase signature 89 98 5.4E-5 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 PRINTS PR00103 cAMP-dependent protein kinase signature 44 58 5.4E-5 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 PRINTS PR00103 cAMP-dependent protein kinase signature 101 112 5.4E-5 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 SMART SM00100 23 141 9.9E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 PANTHER PTHR24567:SF36 13 237 3.5E-64 T 22-04-2016 AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 SUPERFAMILY SSF51206 18 153 9.95E-38 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS08940 9dc3c1ba26f0d5d4b700ce330e48b3cd 240 Gene3D G3DSA:2.60.120.10 18 154 4.4E-38 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 384 558 1.9E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 SUPERFAMILY SSF58104 311 558 2.75E-55 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 SUPERFAMILY SSF58104 244 270 2.75E-55 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 SMART SM00304 215 268 4.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 SMART SM00283 305 559 7.9E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 Pfam PF00672 HAMP domain 196 263 5.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 Gene3D G3DSA:1.10.287.950 321 528 1.8E-45 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 PANTHER PTHR32089 283 562 5.3E-111 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 PANTHER PTHR32089 182 250 5.3E-111 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 PANTHER PTHR32089:SF40 283 562 5.3E-111 T 22-04-2016 AMK58_RS02155 3df7897c6713ba9da2864ca9c6f20e7b 565 PANTHER PTHR32089:SF40 182 250 5.3E-111 T 22-04-2016 AMK58_RS13065 4453a94b2bbc81eefd6690b470ae4a4f 279 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 18 259 9.4E-77 T 22-04-2016 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AMK58_RS13065 4453a94b2bbc81eefd6690b470ae4a4f 279 Gene3D G3DSA:3.90.1200.10 101 226 6.8E-6 T 22-04-2016 AMK58_RS13065 4453a94b2bbc81eefd6690b470ae4a4f 279 SUPERFAMILY SSF56112 28 259 9.04E-31 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 Gene3D G3DSA:1.10.286.20 11 49 8.4E-7 T 22-04-2016 AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 Pfam PF14760 Rnk N-terminus 11 49 2.2E-7 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 Gene3D G3DSA:3.10.50.30 59 132 4.5E-19 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 60 131 2.5E-15 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 SUPERFAMILY SSF54534 59 131 3.79E-13 T 22-04-2016 AMK58_RS05895 ccebb9595b61afb1ba6aa15524a52c9f 135 PANTHER PTHR30437 19 131 1.0E-17 T 22-04-2016 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 10 200 2.5E-98 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 Pfam PF00574 Clp protease 21 200 3.8E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PANTHER PTHR10381:SF11 11 207 5.4E-142 T 22-04-2016 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 98 109 - T 22-04-2016 IPR018215 ClpP, Ser active site AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 SUPERFAMILY SSF52096 18 200 2.67E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 120 133 - T 22-04-2016 IPR033135 ClpP, histidine active site AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 Gene3D G3DSA:3.90.226.10 11 200 1.0E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 1.3E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 1.3E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 1.3E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 1.3E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 1.3E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 PANTHER PTHR10381 11 207 5.4E-142 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK58_RS06090 701f1e3124bd5ba34b53578fa03b7db9 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 43.105 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK58_RS10220 506d1aa071e1a7b2f9f810dac3cee9ae 151 Pfam PF01575 MaoC like domain 16 119 5.6E-17 T 22-04-2016 IPR002539 MaoC-like domain AMK58_RS10220 506d1aa071e1a7b2f9f810dac3cee9ae 151 SUPERFAMILY SSF54637 2 148 8.57E-41 T 22-04-2016 IPR029069 HotDog domain AMK58_RS10220 506d1aa071e1a7b2f9f810dac3cee9ae 151 PANTHER PTHR13078 2 146 2.3E-44 T 22-04-2016 AMK58_RS10220 506d1aa071e1a7b2f9f810dac3cee9ae 151 Gene3D G3DSA:3.10.129.10 2 147 9.3E-44 T 22-04-2016 IPR029069 HotDog domain AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 SUPERFAMILY SSF46785 2 135 4.63E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 PANTHER PTHR33221:SF1 2 155 3.0E-55 T 22-04-2016 AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 Pfam PF02082 Transcriptional regulator 1 83 2.3E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 7.6E-43 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 PANTHER PTHR33221 2 155 3.0E-55 T 22-04-2016 AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK58_RS04910 e6fd6b3fb26f8d6d75466725aea52605 160 Gene3D G3DSA:1.10.10.10 1 135 3.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 518 4.6E-76 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 Gene3D G3DSA:3.40.190.10 177 333 1.6E-29 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 SUPERFAMILY SSF53850 59 602 2.17E-113 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 PANTHER PTHR30290:SF2 1 369 5.6E-174 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 PANTHER PTHR30290:SF2 394 615 5.6E-174 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 PANTHER PTHR30290 1 369 5.6E-174 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 PANTHER PTHR30290 394 615 5.6E-174 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 Gene3D G3DSA:3.10.105.10 334 575 1.4E-45 T 22-04-2016 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 PIRSF PIRSF002741 9 607 3.7E-96 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS11940 6f6ec0bb8393fa9581c115ce555a51f8 616 Gene3D G3DSA:3.90.76.10 109 176 4.7E-18 T 22-04-2016 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 PANTHER PTHR20857 3 209 1.1E-47 T 22-04-2016 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 PANTHER PTHR20857:SF15 3 209 1.1E-47 T 22-04-2016 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 208 22.99 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 Gene3D G3DSA:3.20.20.70 5 208 4.5E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 8 189 3.8E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 SUPERFAMILY SSF51391 5 203 1.44E-64 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS09365 93bd746be1c88992684bfe4ab138dcad 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 198 3.5E-54 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 PANTHER PTHR11403:SF7 13 279 1.1E-131 T 22-04-2016 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 Gene3D G3DSA:1.10.287.70 19 79 1.5E-26 T 22-04-2016 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 Gene3D G3DSA:1.20.120.80 84 276 1.8E-73 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 PANTHER PTHR11403 13 279 1.1E-131 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 Pfam PF00510 Cytochrome c oxidase subunit III 19 277 2.2E-95 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK58_RS09520 8213da7266f4c0b987eabc776b0c0f7d 284 SUPERFAMILY SSF81452 18 276 1.78E-96 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 SUPERFAMILY SSF109604 374 521 6.85E-28 T 22-04-2016 AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 Pfam PF13487 HD domain 405 473 2.9E-17 T 22-04-2016 AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 Pfam PF11849 Domain of unknown function (DUF3369) 154 322 7.6E-58 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 SMART SM00471 335 492 1.4E-5 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 Gene3D G3DSA:3.40.50.2300 29 160 1.4E-13 T 22-04-2016 AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 SUPERFAMILY SSF52172 29 167 2.13E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 Gene3D G3DSA:1.10.3210.10 353 521 2.8E-14 T 22-04-2016 IPR006674 HD domain AMK58_RS01280 db4abc0b7d202be2868edb08220a25f3 528 Pfam PF00072 Response regulator receiver domain 34 143 2.6E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PIRSF PIRSF000126 1 256 4.1E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 Pfam PF00106 short chain dehydrogenase 5 193 8.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PANTHER PTHR24322:SF631 154 185 4.4E-38 T 22-04-2016 AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PANTHER PTHR24322:SF631 8 138 4.4E-38 T 22-04-2016 AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 Gene3D G3DSA:3.40.50.720 4 223 8.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 5.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 SUPERFAMILY SSF51735 4 228 4.96E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PANTHER PTHR24322 154 185 4.4E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PANTHER PTHR24322 8 138 4.4E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10955 a5aa564da7a5ee667bc6dd461f6d8999 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 4.0E-4 T 22-04-2016 AMK58_RS02485 8e108e8fcf84e17c9a4dc4ec67978537 144 Pfam PF04138 GtrA-like protein 22 141 3.1E-22 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 PANTHER PTHR10000:SF7 62 294 6.5E-68 T 22-04-2016 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 SUPERFAMILY SSF56784 82 291 4.55E-43 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 PANTHER PTHR10000 62 294 6.5E-68 T 22-04-2016 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 285 3.8E-62 T 22-04-2016 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 85 255 7.8E-30 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 Gene3D G3DSA:3.40.50.1000 146 285 3.2E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 Gene3D G3DSA:1.10.150.210 95 145 3.6E-24 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 AMK58_RS05500 5aa04fef52a7f211d1b6060292f6fc19 298 Pfam PF12710 haloacid dehalogenase-like hydrolase 87 253 1.5E-16 T 22-04-2016 AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 Pfam PF02562 PhoH-like protein 123 326 7.2E-92 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 PANTHER PTHR30473:SF1 11 349 3.4E-155 T 22-04-2016 AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 Gene3D G3DSA:3.40.50.300 123 325 1.4E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 SUPERFAMILY SSF52540 122 303 5.85E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 SUPERFAMILY SSF54791 20 75 6.96E-5 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK58_RS00705 cf48ccd8490cc7b40b25978a82a1139e 357 PANTHER PTHR30473 11 349 3.4E-155 T 22-04-2016 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 203 223 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 273 291 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Pfam PF01926 50S ribosome-binding GTPase 202 320 2.5E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.8E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 457 2.3E-165 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 SUPERFAMILY SSF52540 138 167 5.14E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 SUPERFAMILY SSF52540 198 465 5.14E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 PANTHER PTHR11649 1 454 6.5E-170 T 22-04-2016 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 122 2.0E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 200 368 6.3E-29 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Gene3D G3DSA:3.40.50.300 195 383 2.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 PANTHER PTHR11649:SF68 1 454 6.5E-170 T 22-04-2016 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 SUPERFAMILY SSF52540 3 169 1.28E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Gene3D G3DSA:3.30.300.20 384 460 7.5E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 PIRSF PIRSF006485 1 466 6.7E-162 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 7.2E-32 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Gene3D G3DSA:3.40.50.300 4 167 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 Hamap MF_00195 GTPase Der [der]. 2 461 37.284 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 SMART SM00382 199 340 0.22 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08030 48338435a312edffb9c2cde20b42e23c 467 SMART SM00382 1 142 2.1 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 SUPERFAMILY SSF53067 169 398 1.08E-80 T 22-04-2016 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 SUPERFAMILY SSF53067 11 205 4.63E-59 T 22-04-2016 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PANTHER PTHR21060:SF11 10 392 1.9E-152 T 22-04-2016 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 Gene3D G3DSA:3.30.420.40 214 394 9.5E-70 T 22-04-2016 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 183 196 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 306 319 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 212 233 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 12 23 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 380 392 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PRINTS PR00471 Acetate kinase family signature 328 344 5.3E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PANTHER PTHR21060 10 392 1.9E-152 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 PIRSF PIRSF000722 9 402 3.5E-138 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 Gene3D G3DSA:3.30.420.40 81 213 4.5E-9 T 22-04-2016 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 Hamap MF_00020 Acetate kinase [ackA]. 1 402 158.984 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 TIGRFAM TIGR00016 ackA: acetate kinase 11 394 3.0E-110 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 12 23 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 Pfam PF00871 Acetokinase family 12 392 1.2E-109 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03755 50b2b28a4c3da8906c533c4acac818c9 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 212 229 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK58_RS03505 7b5689c5ac2a028f1687333df5f9ef8d 266 Gene3D G3DSA:2.60.40.10 164 255 3.2E-13 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS03505 7b5689c5ac2a028f1687333df5f9ef8d 266 Pfam PF13501 Sulfur oxidation protein SoxY 40 143 2.0E-26 T 22-04-2016 IPR032711 Ig-like SoxY domain AMK58_RS03505 7b5689c5ac2a028f1687333df5f9ef8d 266 Pfam PF08770 Sulphur oxidation protein SoxZ 172 253 8.6E-11 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ AMK58_RS03505 7b5689c5ac2a028f1687333df5f9ef8d 266 SUPERFAMILY SSF81296 159 257 2.66E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS03505 7b5689c5ac2a028f1687333df5f9ef8d 266 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 34 251 2.2E-66 T 22-04-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier AMK58_RS04705 f51181942f82feef0271d99182532291 393 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 23 378 4.8E-92 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK58_RS04705 f51181942f82feef0271d99182532291 393 SUPERFAMILY SSF53383 16 381 1.9E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS04705 f51181942f82feef0271d99182532291 393 Gene3D G3DSA:3.40.640.10 16 255 3.3E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS04705 f51181942f82feef0271d99182532291 393 PANTHER PTHR30244:SF16 7 385 1.7E-85 T 22-04-2016 AMK58_RS04705 f51181942f82feef0271d99182532291 393 PANTHER PTHR30244 7 385 1.7E-85 T 22-04-2016 AMK58_RS04705 f51181942f82feef0271d99182532291 393 PIRSF PIRSF000390 12 385 7.4E-92 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK58_RS04705 f51181942f82feef0271d99182532291 393 Gene3D G3DSA:3.90.1150.10 256 382 2.1E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 PANTHER PTHR23133:SF2 10 203 4.8E-107 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 SUPERFAMILY SSF54211 96 186 5.31E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 Gene3D G3DSA:3.30.230.40 98 203 3.7E-34 T 22-04-2016 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 69 82 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 PANTHER PTHR23133 10 203 4.8E-107 T 22-04-2016 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 SUPERFAMILY SSF54211 10 94 6.96E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 Gene3D G3DSA:3.30.230.40 10 97 3.3E-37 T 22-04-2016 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 10 203 43.678 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS00510 70999ca735dcd42e6eb57266b8b294f2 207 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 39 182 1.3E-66 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SUPERFAMILY SSF50978 19 304 7.69E-97 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 206 220 - T 22-04-2016 IPR019775 WD40 repeat, conserved site AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 138 177 2.8E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 12 51 3.4E-4 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 54 93 4.7E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 222 262 6.4E-10 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 180 219 5.4E-11 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 265 304 2.2E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 SMART SM00320 96 135 2.5E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Gene3D G3DSA:2.130.10.10 18 305 5.1E-101 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 PANTHER PTHR22847 19 305 3.4E-93 T 22-04-2016 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 249 263 - T 22-04-2016 IPR019775 WD40 repeat, conserved site AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 PRINTS PR00320 G protein beta WD-40 repeat signature 249 263 4.1E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 PRINTS PR00320 G protein beta WD-40 repeat signature 206 220 4.1E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 PRINTS PR00320 G protein beta WD-40 repeat signature 164 178 4.1E-7 T 22-04-2016 IPR020472 G-protein beta WD-40 repeat AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 267 304 3.6E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 19 51 6.0E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 141 177 1.1E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 97 135 3.9E-6 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 56 93 7.4E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 182 219 9.4E-8 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 Pfam PF00400 WD domain, G-beta repeat 224 262 1.5E-9 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 164 178 - T 22-04-2016 IPR019775 WD40 repeat, conserved site AMK58_RS04355 a6c9c320ba2b1987e05fdb1dd04695b0 314 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 80 94 - T 22-04-2016 IPR019775 WD40 repeat, conserved site AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 226 6.4E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Gene3D G3DSA:1.20.140.10 228 390 3.2E-46 T 22-04-2016 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 125 3.9E-18 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 386 6.6E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 SUPERFAMILY SSF47203 238 390 2.74E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 PANTHER PTHR10909 1 385 1.0E-110 T 22-04-2016 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Gene3D G3DSA:1.10.540.10 1 127 2.9E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 SUPERFAMILY SSF56645 1 250 8.64E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 PANTHER PTHR10909:SF195 1 385 1.0E-110 T 22-04-2016 AMK58_RS08925 c3dfbdf4fade52362ddc22278fcd1078 398 Gene3D G3DSA:2.40.110.10 129 227 1.7E-31 T 22-04-2016 AMK58_RS05425 088a643c4e0d9989c32db95d054a9a80 181 Gene3D G3DSA:2.30.30.220 1 107 1.7E-45 T 22-04-2016 IPR007481 Stringent starvation protein B AMK58_RS05425 088a643c4e0d9989c32db95d054a9a80 181 Pfam PF04386 Stringent starvation protein B 2 173 5.3E-46 T 22-04-2016 IPR007481 Stringent starvation protein B AMK58_RS05425 088a643c4e0d9989c32db95d054a9a80 181 SUPERFAMILY SSF101738 2 106 9.02E-40 T 22-04-2016 IPR007481 Stringent starvation protein B AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 PANTHER PTHR33343 1 66 2.4E-16 T 22-04-2016 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 59 1.8E-20 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 SUPERFAMILY SSF143034 2 60 2.22E-19 T 22-04-2016 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.604 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 Pfam PF01632 Ribosomal protein L35 2 59 1.9E-21 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.9E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK58_RS01255 67b1e67d95d123c1a2cb2420a150fb98 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.9E-13 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK58_RS11700 42ba8484a34bf7ea2dbd4d4343d64749 247 Pfam PF01925 Sulfite exporter TauE/SafE 7 241 3.0E-40 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS11700 42ba8484a34bf7ea2dbd4d4343d64749 247 PANTHER PTHR30269 1 244 1.0E-81 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS11700 42ba8484a34bf7ea2dbd4d4343d64749 247 PANTHER PTHR30269:SF10 1 244 1.0E-81 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PANTHER PTHR19375 10 329 7.0E-167 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-152 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 Gene3D G3DSA:3.30.420.40 266 320 1.2E-32 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 Gene3D G3DSA:3.30.420.40 161 187 1.2E-32 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 8.0E-159 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 Gene3D G3DSA:3.30.420.40 10 160 1.2E-47 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PANTHER PTHR19375:SF117 10 329 7.0E-167 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 7.3E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 7.3E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 7.3E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 7.3E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 7.3E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 Gene3D G3DSA:3.90.640.10 188 262 4.2E-28 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 SUPERFAMILY SSF53067 150 332 1.16E-47 T 22-04-2016 AMK58_RS05545 a222f5323ab73081e9fafd8ce0cd0548 346 SUPERFAMILY SSF53067 10 149 3.53E-40 T 22-04-2016 AMK58_RS09060 b9633facef0c91ae0b300581b2247fd6 168 SUPERFAMILY SSF46785 31 161 2.63E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09060 b9633facef0c91ae0b300581b2247fd6 168 PANTHER PTHR33202:SF6 17 166 2.0E-55 T 22-04-2016 AMK58_RS09060 b9633facef0c91ae0b300581b2247fd6 168 PANTHER PTHR33202 17 166 2.0E-55 T 22-04-2016 AMK58_RS09060 b9633facef0c91ae0b300581b2247fd6 168 Gene3D G3DSA:1.10.10.10 29 98 3.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09060 b9633facef0c91ae0b300581b2247fd6 168 Pfam PF01475 Ferric uptake regulator family 36 156 1.0E-12 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 PANTHER PTHR11695:SF610 23 333 5.0E-142 T 22-04-2016 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 SMART SM00829 18 331 2.9E-55 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 106 1.0E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 Gene3D G3DSA:3.40.50.720 154 270 3.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 SUPERFAMILY SSF50129 9 148 8.07E-37 T 22-04-2016 IPR011032 GroES-like AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 PANTHER PTHR11695 23 333 5.0E-142 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 9 333 3.9E-151 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 SUPERFAMILY SSF51735 120 295 1.49E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 Pfam PF00107 Zinc-binding dehydrogenase 159 274 3.2E-33 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS05180 8cd6f545cb32e9bea8f6e20573b77631 335 Gene3D G3DSA:3.90.180.10 8 153 1.9E-45 T 22-04-2016 IPR011032 GroES-like AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 PIRSF PIRSF004681 1 139 2.2E-49 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 SUPERFAMILY SSF111038 3 139 7.33E-48 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 PANTHER PTHR30615 1 139 1.2E-57 T 22-04-2016 AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 1.7E-43 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 9.5E-39 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMK58_RS05025 e57757d288b95458da9c120b0bad6355 139 Gene3D G3DSA:2.60.120.460 1 139 1.5E-53 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Gene3D G3DSA:1.10.1420.10 283 476 8.9E-32 T 22-04-2016 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Pfam PF05188 MutS domain II 152 269 8.7E-9 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 721 737 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SUPERFAMILY SSF53150 136 299 3.01E-23 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SUPERFAMILY SSF48334 286 593 5.23E-65 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Pfam PF05190 MutS family domain IV 453 547 1.5E-15 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Gene3D G3DSA:3.40.1170.10 16 135 2.2E-48 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SUPERFAMILY SSF52540 596 830 9.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SUPERFAMILY SSF55271 15 131 5.75E-40 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SMART SM00534 640 827 2.9E-110 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 18 897 5.0E-244 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Gene3D G3DSA:3.30.420.110 148 274 9.1E-16 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Pfam PF00488 MutS domain V 643 830 1.1E-82 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Gene3D G3DSA:3.40.50.300 597 830 1.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 PANTHER PTHR11361 18 896 0.0 T 22-04-2016 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Pfam PF05192 MutS domain III 288 588 1.8E-30 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Pfam PF01624 MutS domain I 18 134 4.0E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 SMART SM00533 302 620 8.9E-54 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 17 892 22.238 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK58_RS13870 6fc51791f6bee3f8215fcf44f0ff5b55 901 PANTHER PTHR11361:SF86 18 896 0.0 T 22-04-2016 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 Gene3D G3DSA:3.40.50.1820 89 540 9.8E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 Pfam PF00450 Serine carboxypeptidase 137 517 1.8E-17 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 SUPERFAMILY SSF53474 90 541 2.39E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 PANTHER PTHR11802:SF30 369 513 1.9E-16 T 22-04-2016 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 PANTHER PTHR11802:SF30 137 325 1.9E-16 T 22-04-2016 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 PANTHER PTHR11802 369 513 1.9E-16 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 PANTHER PTHR11802 137 325 1.9E-16 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AMK58_RS10915 1e43a6ed7f1a4ac523080d067a74df4e 555 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 257 264 - T 22-04-2016 IPR018202 Serine carboxypeptidase, serine active site AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 PANTHER PTHR26402 6 129 2.4E-58 T 22-04-2016 AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 297 4.4E-52 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 PANTHER PTHR26402:SF495 6 129 2.4E-58 T 22-04-2016 AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 SUPERFAMILY SSF52172 5 129 6.83E-39 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 Gene3D G3DSA:3.30.70.270 137 298 3.5E-55 T 22-04-2016 AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 296 1.0E-50 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 Pfam PF00072 Response regulator receiver domain 8 118 4.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 Gene3D G3DSA:3.40.50.2300 3 129 7.7E-41 T 22-04-2016 AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 SUPERFAMILY SSF55073 140 298 3.14E-50 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 SMART SM00267 124 300 5.4E-68 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12695 c3faada4d86e8de6fef093586f54d7c1 306 SMART SM00448 6 118 5.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Gene3D G3DSA:3.40.1380.20 331 474 1.7E-44 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Gene3D G3DSA:2.40.33.10 83 175 1.4E-26 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 SUPERFAMILY SSF52935 327 477 1.22E-37 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 194 208 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 298 316 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 69 85 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 221 247 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 317 333 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 248 272 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PRINTS PR01050 Pyruvate kinase family signature 273 297 1.2E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Gene3D G3DSA:3.20.20.60 176 330 3.3E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Gene3D G3DSA:3.20.20.60 13 82 3.3E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 474 1.7E-30 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 Pfam PF00224 Pyruvate kinase, barrel domain 12 341 3.4E-112 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 13 475 1.7E-153 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 SUPERFAMILY SSF50800 80 175 1.62E-23 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 PANTHER PTHR11817 7 477 2.1E-207 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 SUPERFAMILY SSF51621 9 84 5.23E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS05800 0891f4f943e174ee2c5a0dbac42bef5d 480 SUPERFAMILY SSF51621 164 346 5.23E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS06215 2ca7cac4ab9dcd6d2e6a85c66c3d0e75 199 SUPERFAMILY SSF48150 4 168 1.52E-53 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS06215 2ca7cac4ab9dcd6d2e6a85c66c3d0e75 199 PANTHER PTHR30037 3 180 6.0E-79 T 22-04-2016 AMK58_RS06215 2ca7cac4ab9dcd6d2e6a85c66c3d0e75 199 Gene3D G3DSA:1.10.340.30 5 165 4.2E-47 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS06215 2ca7cac4ab9dcd6d2e6a85c66c3d0e75 199 Pfam PF03352 Methyladenine glycosylase 17 121 3.2E-41 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMK58_RS06215 2ca7cac4ab9dcd6d2e6a85c66c3d0e75 199 PANTHER PTHR30037:SF4 3 180 6.0E-79 T 22-04-2016 AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 12 348 3.8E-85 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 PANTHER PTHR13932 1 388 5.4E-138 T 22-04-2016 AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 SUPERFAMILY SSF102114 6 387 3.27E-105 T 22-04-2016 AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 Gene3D G3DSA:3.80.30.20 11 242 6.4E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 SMART SM00729 9 228 1.8E-43 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 Pfam PF06969 HemN C-terminal domain 313 376 3.6E-11 T 22-04-2016 IPR010723 HemN, C-terminal AMK58_RS13800 ea6b7d768a0b574f6b359bca473e60bd 388 Pfam PF04055 Radical SAM superfamily 14 179 3.5E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 Gene3D G3DSA:3.40.50.9100 1 131 1.6E-57 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 127 2.0E-42 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 1 129 1.3E-53 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 PANTHER PTHR21272 1 133 1.2E-74 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 Pfam PF01220 Dehydroquinase class II 1 126 4.4E-51 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 PIRSF PIRSF001399 1 133 1.0E-56 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 133 63.116 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS04220 401f0b6363cfef5e7a224d55dd8dfe67 133 SUPERFAMILY SSF52304 1 131 9.94E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 PANTHER PTHR24095:SF178 1 229 1.4E-147 T 22-04-2016 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 SUPERFAMILY SSF56801 2 230 2.75E-69 T 22-04-2016 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 Gene3D G3DSA:3.40.50.980 2 37 4.3E-11 T 22-04-2016 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 PRINTS PR00154 AMP-binding signature 31 39 4.0E-5 T 22-04-2016 IPR020459 AMP-binding AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 PRINTS PR00154 AMP-binding signature 19 30 4.0E-5 T 22-04-2016 IPR020459 AMP-binding AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 Gene3D G3DSA:3.40.50.980 38 187 3.9E-19 T 22-04-2016 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 Pfam PF00501 AMP-binding enzyme 14 230 9.4E-49 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 ProSitePatterns PS00455 Putative AMP-binding domain signature. 24 35 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS23430 39e4b826d7b66159314fc5cd710fb67a 231 PANTHER PTHR24095 1 229 1.4E-147 T 22-04-2016 AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 Pfam PF00005 ABC transporter 17 162 2.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 PANTHER PTHR24220 3 237 2.7E-105 T 22-04-2016 AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 Gene3D G3DSA:3.40.50.300 1 226 2.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 SUPERFAMILY SSF52540 2 232 5.54E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 SMART SM00382 26 213 3.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03210 92fc0bb7178d8e87cb2b02802258ea87 237 PANTHER PTHR24220:SF568 3 237 2.7E-105 T 22-04-2016 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 PIRSF PIRSF002211 1 62 9.6E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 61 18.818 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 1.1E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 Gene3D G3DSA:3.30.1390.20 4 61 1.6E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 PANTHER PTHR15892:SF2 5 62 7.5E-24 T 22-04-2016 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 SUPERFAMILY SSF55129 5 60 1.29E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 PANTHER PTHR15892 5 62 7.5E-24 T 22-04-2016 AMK58_RS10315 99131e40627e4f87fb982cbf7b7e270c 63 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 1.6E-17 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SUPERFAMILY SSF52210 293 450 8.37E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 PANTHER PTHR11117:SF8 27 703 9.1E-283 T 22-04-2016 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 148 284 1.2E-55 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Gene3D G3DSA:3.30.470.20 488 569 4.4E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 PANTHER PTHR11117 27 703 9.1E-283 T 22-04-2016 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Gene3D G3DSA:3.40.630.30 723 881 7.4E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Pfam PF13549 ATP-grasp domain 477 698 2.5E-86 T 22-04-2016 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Pfam PF00583 Acetyltransferase (GNAT) family 795 869 2.8E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Gene3D G3DSA:3.40.50.261 130 282 1.9E-31 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SUPERFAMILY SSF56059 485 702 2.14E-40 T 22-04-2016 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SUPERFAMILY SSF51735 1 136 1.25E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SUPERFAMILY SSF55729 727 880 1.21E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Gene3D G3DSA:3.40.50.720 2 129 1.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Pfam PF13380 CoA binding domain 14 132 4.9E-18 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SMART SM00881 9 103 1.2E-28 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 SUPERFAMILY SSF52210 128 285 1.7E-45 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS00845 743a3e38102a7e609b7e6f321a6a1a6b 894 Gene3D G3DSA:3.40.50.261 289 442 4.1E-21 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02620 72354d44ade0e5d8c52dae2d9a23a387 180 SMART SM00530 7 61 0.0076 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS02620 72354d44ade0e5d8c52dae2d9a23a387 180 Gene3D G3DSA:1.10.260.40 3 67 9.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02620 72354d44ade0e5d8c52dae2d9a23a387 180 Pfam PF12844 Helix-turn-helix domain 5 66 7.9E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS02620 72354d44ade0e5d8c52dae2d9a23a387 180 SUPERFAMILY SSF47413 1 66 9.19E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS08415 1b705941130b437306374975920e8221 232 SUPERFAMILY SSF144091 5 202 4.32E-32 T 22-04-2016 AMK58_RS08415 1b705941130b437306374975920e8221 232 Pfam PF01694 Rhomboid family 51 201 1.3E-33 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK58_RS08415 1b705941130b437306374975920e8221 232 PANTHER PTHR22936 57 229 5.4E-24 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK58_RS08415 1b705941130b437306374975920e8221 232 Gene3D G3DSA:1.20.1540.10 7 201 7.7E-31 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 PANTHER PTHR22981 11 293 9.5E-144 T 22-04-2016 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 11 168 2.1E-46 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 PANTHER PTHR22981:SF49 11 293 9.5E-144 T 22-04-2016 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 Gene3D G3DSA:3.40.50.720 5 172 8.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04015 97d309f705b8feefba653310134e9108 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 13 26 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 PIRSF PIRSF000103 3 293 5.6E-70 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 SUPERFAMILY SSF51735 10 169 5.33E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04015 97d309f705b8feefba653310134e9108 293 SUPERFAMILY SSF48179 169 291 7.03E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 Gene3D G3DSA:1.10.1040.10 173 291 2.1E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS04015 97d309f705b8feefba653310134e9108 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 288 1.5E-34 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 216 2.0E-60 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 PANTHER PTHR30435 1 236 2.1E-51 T 22-04-2016 AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 166 234 6.0E-18 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 Pfam PF00460 Flagella basal body rod protein 5 35 1.8E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 PANTHER PTHR30435:SF18 1 236 2.1E-51 T 22-04-2016 AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 120 2.4E-39 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK58_RS10155 5e58ee06ca74d174fe67660d51619129 240 SUPERFAMILY SSF117143 77 197 3.92E-22 T 22-04-2016 AMK58_RS10695 2278407128150b96ecaac3ba3e489147 272 PANTHER PTHR30151:SF0 34 272 1.6E-85 T 22-04-2016 AMK58_RS10695 2278407128150b96ecaac3ba3e489147 272 PANTHER PTHR30151 34 272 1.6E-85 T 22-04-2016 AMK58_RS10695 2278407128150b96ecaac3ba3e489147 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 268 3.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10695 2278407128150b96ecaac3ba3e489147 272 SUPERFAMILY SSF161098 74 256 9.16E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10695 2278407128150b96ecaac3ba3e489147 272 Gene3D G3DSA:1.10.3720.10 72 269 1.0E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Gene3D G3DSA:2.40.50.140 351 432 4.1E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 732 2.6E-36 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Pfam PF17092 Penicillin-binding protein OB-like domain 320 436 1.2E-21 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 SUPERFAMILY SSF53955 42 257 1.41E-71 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Gene3D G3DSA:3.40.710.10 235 317 1.2E-137 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Gene3D G3DSA:3.40.710.10 433 784 1.2E-137 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 SUPERFAMILY SSF56601 265 317 1.31E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 SUPERFAMILY SSF56601 433 782 1.31E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 SUPERFAMILY SSF56601 214 236 1.31E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282 432 621 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282 643 780 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282 1 314 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Gene3D G3DSA:1.10.3810.10 56 234 1.1E-67 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 736 1.2E-185 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282:SF5 432 621 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282:SF5 643 780 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 PANTHER PTHR32282:SF5 1 314 2.7E-242 T 22-04-2016 AMK58_RS10725 7f66ee937a7961c8630f620d5228280a 836 Pfam PF00912 Transglycosylase 55 232 1.9E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 SUPERFAMILY SSF52540 4 244 6.45E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 SMART SM00382 29 223 3.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 PANTHER PTHR24220:SF358 6 245 3.2E-104 T 22-04-2016 AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 Pfam PF00005 ABC transporter 21 174 1.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 Gene3D G3DSA:3.40.50.300 4 243 2.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 245 7.2E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS10545 f19c7106c0fcda4723385b4a01284b3d 248 PANTHER PTHR24220 6 245 3.2E-104 T 22-04-2016 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 PANTHER PTHR23088:SF26 6 290 4.8E-169 T 22-04-2016 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 PANTHER PTHR23088 6 290 4.8E-169 T 22-04-2016 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 SUPERFAMILY SSF56317 7 287 2.88E-85 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 9 286 3.3E-144 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 Pfam PF00795 Carbon-nitrogen hydrolase 10 270 1.4E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS07185 cee0a3320eb7afeeec9e7994dfd57997 298 Gene3D G3DSA:3.60.110.10 7 288 4.0E-96 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 SUPERFAMILY SSF47384 89 152 1.79E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 Gene3D G3DSA:1.10.287.130 108 155 8.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 SUPERFAMILY SSF55785 3 92 5.39E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 90 4.3E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 Gene3D G3DSA:3.30.450.20 3 107 6.2E-14 T 22-04-2016 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 PANTHER PTHR24423 3 155 3.1E-19 T 22-04-2016 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 Pfam PF08448 PAS fold 4 85 7.7E-10 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS23305 ffda7999da6e05f0fa89de9b843b0de9 155 Pfam PF00512 His Kinase A (phospho-acceptor) domain 104 152 9.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03840 96129f2b8b010e26e6d6f34907b8b74c 395 SUPERFAMILY SSF75708 71 240 6.8E-39 T 22-04-2016 AMK58_RS03840 96129f2b8b010e26e6d6f34907b8b74c 395 Gene3D G3DSA:1.10.287.500 102 143 3.5E-4 T 22-04-2016 AMK58_RS03840 96129f2b8b010e26e6d6f34907b8b74c 395 Gene3D G3DSA:1.10.287.500 150 192 4.0E-11 T 22-04-2016 AMK58_RS03840 96129f2b8b010e26e6d6f34907b8b74c 395 Pfam PF04344 Chemotaxis phosphatase, CheZ 152 240 9.6E-8 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00412 Epoxide hydrolase signature 236 258 8.1E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00412 Epoxide hydrolase signature 87 100 8.1E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00412 Epoxide hydrolase signature 101 114 8.1E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00412 Epoxide hydrolase signature 44 59 8.1E-9 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 Gene3D G3DSA:3.40.50.1820 3 258 3.8E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PANTHER PTHR10992 3 258 1.2E-87 T 22-04-2016 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 SUPERFAMILY SSF53474 3 258 2.39E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 5.5E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 5.5E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 5.5E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 5.5E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 Pfam PF12697 Alpha/beta hydrolase family 21 253 8.4E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06560 46bb4812edbe7f2df7487d1f991d6872 259 PANTHER PTHR10992:SF768 3 258 1.2E-87 T 22-04-2016 AMK58_RS28290 d1d46172f1e5ad93c6943aa0d352380b 185 Gene3D G3DSA:3.40.50.300 38 185 2.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28290 d1d46172f1e5ad93c6943aa0d352380b 185 Pfam PF00005 ABC transporter 66 185 2.5E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS28290 d1d46172f1e5ad93c6943aa0d352380b 185 SUPERFAMILY SSF52540 40 185 1.09E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28290 d1d46172f1e5ad93c6943aa0d352380b 185 PANTHER PTHR19211:SF6 39 185 3.0E-36 T 22-04-2016 AMK58_RS28290 d1d46172f1e5ad93c6943aa0d352380b 185 PANTHER PTHR19211 39 185 3.0E-36 T 22-04-2016 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 SUPERFAMILY SSF58104 82 112 2.22E-32 T 22-04-2016 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 SUPERFAMILY SSF58104 162 347 2.22E-32 T 22-04-2016 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 PANTHER PTHR32089:SF36 244 315 2.9E-17 T 22-04-2016 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 PANTHER PTHR32089 244 315 2.9E-17 T 22-04-2016 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 SMART SM00283 159 402 1.5E-4 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 233 353 1.1E-21 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS01960 0062b059f8bde9a4db0cd50be67b3653 419 Gene3D G3DSA:1.10.287.950 185 328 6.5E-27 T 22-04-2016 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PIRSF PIRSF001438 1 308 3.0E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Gene3D G3DSA:3.40.190.10 2 113 8.9E-45 T 22-04-2016 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 300 36.492 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PANTHER PTHR11557 5 299 2.5E-140 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 SUPERFAMILY SSF53850 4 222 1.55E-77 T 22-04-2016 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 234 250 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 SUPERFAMILY SSF54782 223 306 2.09E-21 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Gene3D G3DSA:3.30.160.40 226 298 7.1E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PRINTS PR00151 Porphobilinogen deaminase signature 127 144 4.6E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PRINTS PR00151 Porphobilinogen deaminase signature 146 163 4.6E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PRINTS PR00151 Porphobilinogen deaminase signature 79 98 4.6E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PRINTS PR00151 Porphobilinogen deaminase signature 48 68 4.6E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 PRINTS PR00151 Porphobilinogen deaminase signature 233 250 4.6E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 297 2.6E-105 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Gene3D G3DSA:3.40.190.10 114 202 1.6E-35 T 22-04-2016 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 298 6.7E-17 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02025 77783ad3b6563344215f545b609aaa40 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 215 1.9E-73 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS03535 d7d5357bdb2380cde78dd782b36f08cf 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 232 5.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03535 d7d5357bdb2380cde78dd782b36f08cf 252 PANTHER PTHR30151 1 247 9.9E-54 T 22-04-2016 AMK58_RS03535 d7d5357bdb2380cde78dd782b36f08cf 252 PANTHER PTHR30151:SF0 1 247 9.9E-54 T 22-04-2016 AMK58_RS03535 d7d5357bdb2380cde78dd782b36f08cf 252 Gene3D G3DSA:1.10.3720.10 45 242 1.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03535 d7d5357bdb2380cde78dd782b36f08cf 252 SUPERFAMILY SSF161098 48 231 1.57E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 PANTHER PTHR30465 14 301 3.9E-118 T 22-04-2016 AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 SUPERFAMILY SSF161098 97 284 3.53E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 Gene3D G3DSA:1.10.3720.10 94 300 2.2E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 301 1.7E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 33 79 2.3E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK58_RS13035 2eaa90cd53c0eb185247c2bac5ecb343 303 PANTHER PTHR30465:SF10 14 301 3.9E-118 T 22-04-2016 AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 Gene3D G3DSA:3.40.50.300 3 232 4.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 SUPERFAMILY SSF52540 3 219 3.27E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 PANTHER PTHR24220 4 218 2.7E-89 T 22-04-2016 AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 SMART SM00382 27 208 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 Pfam PF00005 ABC transporter 18 157 8.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS10690 7261470e5715a203d5fb97664c061533 257 PANTHER PTHR24220:SF589 4 218 2.7E-89 T 22-04-2016 AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 Gene3D G3DSA:1.10.3210.10 337 513 1.6E-15 T 22-04-2016 IPR006674 HD domain AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 SUPERFAMILY SSF109604 328 513 5.76E-30 T 22-04-2016 AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 SMART SM00471 333 483 1.2E-5 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 Pfam PF11849 Domain of unknown function (DUF3369) 150 315 5.2E-29 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 Pfam PF13487 HD domain 396 465 1.9E-14 T 22-04-2016 AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 Gene3D G3DSA:3.40.50.2300 21 145 3.8E-7 T 22-04-2016 AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 SUPERFAMILY SSF52172 20 155 7.91E-8 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02145 d1338e400b080e9b5031d710e3be35a3 555 SUPERFAMILY SSF55781 236 318 1.5E-5 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PANTHER PTHR10992 211 312 2.5E-115 T 22-04-2016 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PANTHER PTHR10992 3 175 2.5E-115 T 22-04-2016 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 Pfam PF00561 alpha/beta hydrolase fold 38 297 2.5E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PANTHER PTHR10992:SF860 211 312 2.5E-115 T 22-04-2016 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PANTHER PTHR10992:SF860 3 175 2.5E-115 T 22-04-2016 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PIRSF PIRSF006431 1 316 1.1E-129 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 Gene3D G3DSA:3.40.50.1820 10 310 2.9E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 3.21E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 3.21E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 3.21E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 65 76 1.37E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 108 122 1.37E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 39 47 1.37E-12 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 11 312 2.8E-117 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK58_RS01225 a1582090054e2e24116e905b8b76ee12 316 SUPERFAMILY SSF53474 5 299 8.51E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 PANTHER PTHR10359 53 248 2.8E-42 T 22-04-2016 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 SUPERFAMILY SSF48150 28 241 1.73E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 Gene3D G3DSA:1.10.1670.10 152 242 2.7E-23 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 PIRSF PIRSF001435 20 247 5.0E-36 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 Gene3D G3DSA:1.10.340.30 48 151 6.6E-18 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 184 1.7E-7 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 SMART SM00478 58 221 3.4E-15 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS09810 32f6b9aaecbe49a2b777343caec8f1a0 260 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 223 239 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 SUPERFAMILY SSF53300 75 263 5.79E-34 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 PANTHER PTHR22550 2 310 2.0E-86 T 22-04-2016 AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 SMART SM00327 77 261 6.8E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 PANTHER PTHR22550:SF12 2 310 2.0E-86 T 22-04-2016 AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 Gene3D G3DSA:3.40.50.410 77 263 1.8E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03120 4487441c00ca519296ff36e68719b695 321 Pfam PF00092 von Willebrand factor type A domain 79 261 6.4E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 344 9.2E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 PANTHER PTHR30482 38 92 1.7E-166 T 22-04-2016 AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 PANTHER PTHR30482 120 377 1.7E-166 T 22-04-2016 AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 40 355 1.4E-134 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 PANTHER PTHR30482:SF4 38 92 1.7E-166 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK58_RS10605 c880a02d260ca4251d8e8a2f7d65ac02 379 PANTHER PTHR30482:SF4 120 377 1.7E-166 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PANTHER PTHR23402 5 201 3.0E-43 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 Gene3D G3DSA:3.40.630.20 5 197 1.6E-49 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 SUPERFAMILY SSF53182 5 197 7.85E-54 T 22-04-2016 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PIRSF PIRSF015592 2 200 4.8E-54 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 Pfam PF01470 Pyroglutamyl peptidase 5 193 1.4E-48 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 77 97 7.7E-24 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 129 145 7.7E-24 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 5 28 7.7E-24 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 159 171 7.7E-24 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS00110 c607127d4217f0c0e31408e931e369c8 205 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 59 71 7.7E-24 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 SUPERFAMILY SSF53790 12 254 6.15E-70 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 Gene3D G3DSA:3.40.1010.10 15 131 4.7E-40 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 228 1.7E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 16 253 1.1E-82 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 PANTHER PTHR21091 1 255 7.6E-62 T 22-04-2016 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 Gene3D G3DSA:3.30.950.10 132 260 1.8E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 PANTHER PTHR21091:SF16 1 255 7.6E-62 T 22-04-2016 AMK58_RS08210 c59e998229164a0ce2b7357e9f4ac3ad 274 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 96 129 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 Pfam PF13365 Trypsin-like peptidase domain 69 202 1.2E-12 T 22-04-2016 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 Gene3D G3DSA:2.30.42.10 249 326 2.2E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PANTHER PTHR22939:SF98 45 325 2.3E-39 T 22-04-2016 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 SUPERFAMILY SSF50156 244 326 1.58E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 Gene3D G3DSA:2.40.10.10 40 134 3.9E-11 T 22-04-2016 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PANTHER PTHR22939 45 325 2.3E-39 T 22-04-2016 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 SUPERFAMILY SSF50494 39 239 8.99E-26 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PRINTS PR00834 HtrA/DegQ protease family signature 78 90 5.3E-8 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PRINTS PR00834 HtrA/DegQ protease family signature 99 119 5.3E-8 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 5.3E-8 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 PRINTS PR00834 HtrA/DegQ protease family signature 275 287 5.3E-8 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 Gene3D G3DSA:2.40.10.10 135 248 5.3E-7 T 22-04-2016 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 SMART SM00228 247 318 2.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS07720 ba730cfb152034b8b0083f1c2314ebbb 340 Pfam PF13180 PDZ domain 247 325 1.0E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SMART SM00091 25 91 7.9E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SMART SM00052 316 566 1.3E-124 T 22-04-2016 IPR001633 EAL domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Gene3D G3DSA:3.20.20.450 319 571 1.5E-101 T 22-04-2016 IPR001633 EAL domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 302 1.2E-14 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 PANTHER PTHR33121 130 145 1.4E-81 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 PANTHER PTHR33121 271 571 1.4E-81 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SUPERFAMILY SSF55785 25 136 1.06E-15 T 22-04-2016 IPR000014 PAS domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Pfam PF08448 PAS fold 31 140 2.4E-17 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 PANTHER PTHR33121:SF13 130 145 1.4E-81 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 PANTHER PTHR33121:SF13 271 571 1.4E-81 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SMART SM00267 138 306 1.5E-19 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Gene3D G3DSA:3.30.450.20 24 145 4.2E-18 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 144 6.0E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SUPERFAMILY SSF141868 321 569 3.79E-90 T 22-04-2016 IPR001633 EAL domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 SUPERFAMILY SSF55073 155 308 2.04E-23 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Pfam PF00563 EAL domain 323 561 1.6E-77 T 22-04-2016 IPR001633 EAL domain AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Gene3D G3DSA:3.30.70.270 150 314 8.9E-28 T 22-04-2016 AMK58_RS12125 98f80ba41fc600b734922dee40936523 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 301 2.5E-23 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS00430 67af7d3e2b870573c9d9778ce0a139de 142 PIRSF PIRSF004638 1 142 5.0E-60 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 AMK58_RS00430 67af7d3e2b870573c9d9778ce0a139de 142 PANTHER PTHR40255 1 142 4.4E-56 T 22-04-2016 AMK58_RS00430 67af7d3e2b870573c9d9778ce0a139de 142 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 142 9.5E-54 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 AMK58_RS00430 67af7d3e2b870573c9d9778ce0a139de 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 142 8.4E-61 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 SMART SM00347 47 147 1.7E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 Pfam PF01047 MarR family 55 112 4.4E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 Gene3D G3DSA:1.10.10.10 27 162 7.9E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 SUPERFAMILY SSF46785 28 162 9.26E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 PANTHER PTHR33164 30 171 7.9E-26 T 22-04-2016 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07190 f1fa62db820088153e02ab87ce94245b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 269 277 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 290 2.4E-64 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PANTHER PTHR10025 1 295 1.2E-158 T 22-04-2016 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 122 2.9E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 Gene3D G3DSA:3.40.192.10 8 142 2.2E-47 T 22-04-2016 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 SUPERFAMILY SSF51735 124 289 5.73E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 158 178 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 207 236 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 264 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 265 283 8.14E-82 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 77 102 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 SUPERFAMILY SSF53223 4 123 1.92E-40 T 22-04-2016 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 292 38.491 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK58_RS01485 1661f7e68524d75ee7a9bbf514a72a58 302 Gene3D G3DSA:3.40.50.720 143 273 1.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 Pfam PF00580 UvrD/REP helicase N-terminal domain 489 536 1.6E-5 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 Gene3D G3DSA:3.40.50.300 266 371 2.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 Gene3D G3DSA:3.40.50.300 468 563 2.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 PANTHER PTHR11070 242 729 5.3E-25 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 Gene3D G3DSA:3.40.50.300 564 742 1.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 SUPERFAMILY SSF52540 262 419 1.21E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 SUPERFAMILY SSF52540 452 732 1.21E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01805 e16d1256ee89326cc5e884ab368299c9 895 Pfam PF13361 UvrD-like helicase C-terminal domain 669 728 2.9E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 PANTHER PTHR23091 2 205 1.8E-19 T 22-04-2016 AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 Gene3D G3DSA:3.40.630.30 202 365 1.7E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 Gene3D G3DSA:3.40.630.30 10 172 3.6E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 SUPERFAMILY SSF55729 201 365 1.27E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 SUPERFAMILY SSF55729 9 174 7.89E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 Pfam PF00583 Acetyltransferase (GNAT) family 74 148 2.0E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS05080 b741ce5107071cf7549cb8a95ee0e17d 370 Pfam PF00583 Acetyltransferase (GNAT) family 264 341 1.9E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Gene3D G3DSA:1.10.287.950 304 522 4.5E-42 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SMART SM00283 300 554 1.7E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Gene3D G3DSA:1.20.120.50 577 702 2.5E-31 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Gene3D G3DSA:3.30.450.20 23 180 7.1E-55 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PANTHER PTHR32089 122 246 9.5E-142 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SMART SM01049 34 128 2.1E-40 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SUPERFAMILY SSF47188 577 703 8.5E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PANTHER PTHR32089:SF56 278 557 9.5E-142 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Pfam PF01814 Hemerythrin HHE cation binding domain 589 694 1.4E-10 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SMART SM00304 211 264 7.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Pfam PF17200 Single Cache domain 2 37 187 3.0E-46 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 553 5.5E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 ProSitePatterns PS00550 Hemerythrin family signature. 632 659 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PANTHER PTHR32089 278 557 9.5E-142 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 1.0E-8 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 1.0E-8 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 PANTHER PTHR32089:SF56 122 246 9.5E-142 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 580 702 3.5E-31 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SUPERFAMILY SSF58104 239 266 6.8E-59 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 SUPERFAMILY SSF58104 306 553 6.8E-59 T 22-04-2016 AMK58_RS04410 80013417a0aa216953f66b9602f54e11 714 Pfam PF00672 HAMP domain 192 257 2.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 175 1.3E-51 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 PANTHER PTHR11019:SF115 5 179 1.8E-77 T 22-04-2016 AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 PANTHER PTHR11019 5 179 1.8E-77 T 22-04-2016 AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 Gene3D G3DSA:3.40.50.880 3 180 6.2E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 SUPERFAMILY SSF52317 7 177 6.25E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS07045 e488504437b35ffbd8b07baf1a1715e0 190 Pfam PF01965 DJ-1/PfpI family 8 176 3.3E-56 T 22-04-2016 IPR002818 DJ-1/PfpI AMK58_RS09555 a1928c4d81ee19e265ea8af293a6081e 174 SUPERFAMILY SSF55021 4 82 2.79E-11 T 22-04-2016 AMK58_RS09555 a1928c4d81ee19e265ea8af293a6081e 174 Gene3D G3DSA:3.30.70.260 5 80 4.7E-12 T 22-04-2016 AMK58_RS09555 a1928c4d81ee19e265ea8af293a6081e 174 Pfam PF13740 ACT domain 97 168 4.5E-5 T 22-04-2016 AMK58_RS09555 a1928c4d81ee19e265ea8af293a6081e 174 Gene3D G3DSA:3.30.70.260 94 171 2.3E-11 T 22-04-2016 AMK58_RS09555 a1928c4d81ee19e265ea8af293a6081e 174 SUPERFAMILY SSF55021 93 171 9.82E-11 T 22-04-2016 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 PANTHER PTHR11751:SF384 42 108 3.3E-25 T 22-04-2016 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 SMART SM00345 21 82 6.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 Pfam PF07729 FCD domain 92 213 4.3E-27 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 SUPERFAMILY SSF46785 14 86 6.99E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 8.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 SUPERFAMILY SSF48008 89 223 1.54E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 Gene3D G3DSA:1.20.120.530 87 224 1.1E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 Gene3D G3DSA:1.10.10.10 9 82 2.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 SMART SM00895 92 216 2.5E-18 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 2.8E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 2.8E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06990 f625a240964ddc2d7ec1d2f440879b52 229 PANTHER PTHR11751 42 108 3.3E-25 T 22-04-2016 AMK58_RS04400 fce2545cb7660585ff3ecd775117efa3 200 PANTHER PTHR12151 40 194 6.2E-74 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC AMK58_RS04400 fce2545cb7660585ff3ecd775117efa3 200 Gene3D G3DSA:3.40.30.10 13 198 6.3E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS04400 fce2545cb7660585ff3ecd775117efa3 200 Pfam PF02630 SCO1/SenC 32 181 4.7E-50 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC AMK58_RS04400 fce2545cb7660585ff3ecd775117efa3 200 SUPERFAMILY SSF52833 40 196 3.45E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 PANTHER PTHR24220:SF150 6 248 1.3E-120 T 22-04-2016 AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 Gene3D G3DSA:3.40.50.300 3 237 5.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 SUPERFAMILY SSF50331 237 348 1.08E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 SMART SM00382 29 212 4.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 Pfam PF08402 TOBE domain 279 348 5.1E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 Pfam PF00005 ABC transporter 21 162 1.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 PANTHER PTHR24220 6 248 1.3E-120 T 22-04-2016 AMK58_RS00920 a9990071e6a8235e463892679fe16e00 353 SUPERFAMILY SSF52540 5 243 2.79E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12040 3e256fdef0ed412f339029f3264a5adb 192 SUPERFAMILY SSF52799 52 157 7.78E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMK58_RS12040 3e256fdef0ed412f339029f3264a5adb 192 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 96 106 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 AMK58_RS12040 3e256fdef0ed412f339029f3264a5adb 192 Gene3D G3DSA:3.90.190.10 22 145 6.7E-10 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 2.5E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 Gene3D G3DSA:3.40.50.720 1 161 1.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 SUPERFAMILY SSF48179 162 291 5.33E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 Gene3D G3DSA:1.10.1040.10 163 290 1.6E-40 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 SUPERFAMILY SSF51735 1 160 1.75E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 1.0E-52 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 PANTHER PTHR22981:SF70 1 291 2.5E-135 T 22-04-2016 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 3.8E-127 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 PIRSF PIRSF000103 1 292 5.5E-74 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMK58_RS06970 40fc3d1954bf545cd9921f7024ead926 302 PANTHER PTHR22981 1 291 2.5E-135 T 22-04-2016 AMK58_RS08170 f4682a999f677a5e0a6c2827a6180953 94 Pfam PF07369 Protein of unknown function (DUF1488) 6 84 2.4E-9 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 AMK58_RS08170 f4682a999f677a5e0a6c2827a6180953 94 SUPERFAMILY SSF160272 5 84 6.02E-5 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 AMK58_RS08170 f4682a999f677a5e0a6c2827a6180953 94 Gene3D G3DSA:3.30.160.140 5 85 6.7E-6 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 489 7.0E-199 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PANTHER PTHR22773 1 493 1.3E-218 T 22-04-2016 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PANTHER PTHR22773:SF40 1 493 1.3E-218 T 22-04-2016 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 240 264 4.3E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 4.3E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 171 195 4.3E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 4.3E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 141 160 4.3E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 78 130 2.8E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 AMK58_RS06180 3d6f920f1c548a73283830211365eb72 508 Pfam PF00361 Proton-conducting membrane transporter 135 419 1.1E-88 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 Pfam PF00561 alpha/beta hydrolase fold 287 523 1.2E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 108 280 2.1E-82 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 Gene3D G3DSA:3.40.50.1820 212 564 6.2E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 PANTHER PTHR36837:SF2 21 597 5.9E-250 T 22-04-2016 AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 SUPERFAMILY SSF53474 238 532 1.86E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 PANTHER PTHR36837 21 597 5.9E-250 T 22-04-2016 AMK58_RS06750 be21249599fc35387d272fd2fdeba6e3 599 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 65 595 6.5E-246 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 PANTHER PTHR10422 29 166 1.7E-74 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 Gene3D G3DSA:1.10.760.10 21 230 1.1E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 239 4.9E-107 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 233 6.6E-98 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 PANTHER PTHR10422:SF23 29 166 1.7E-74 T 22-04-2016 AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 SUPERFAMILY SSF46626 21 161 3.13E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS00985 abc419a9aa4ca5eaff33a0ffccbe7039 246 SUPERFAMILY SSF46626 204 227 3.13E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS08700 0f76b063f19b5ec278299d062671cb55 207 PANTHER PTHR30086 2 207 3.4E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS08700 0f76b063f19b5ec278299d062671cb55 207 Pfam PF01810 LysE type translocator 16 203 1.9E-23 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS08700 0f76b063f19b5ec278299d062671cb55 207 PANTHER PTHR30086:SF6 2 207 3.4E-45 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Gene3D G3DSA:3.30.450.20 178 303 4.7E-13 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SUPERFAMILY SSF47384 311 384 9.81E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SMART SM00448 569 688 6.7E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SUPERFAMILY SSF55874 385 535 3.67E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SMART SM00387 428 537 2.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Pfam PF00072 Response regulator receiver domain 571 688 1.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Gene3D G3DSA:3.40.50.2300 569 692 1.7E-28 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PANTHER PTHR24423:SF458 171 692 9.8E-115 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SUPERFAMILY SSF55785 75 187 2.72E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PANTHER PTHR24423 171 692 9.8E-115 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SMART SM00388 320 386 3.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Pfam PF12860 PAS fold 73 185 3.4E-18 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Gene3D G3DSA:3.30.450.20 64 177 2.7E-5 T 22-04-2016 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SUPERFAMILY SSF55785 177 303 2.51E-14 T 22-04-2016 IPR000014 PAS domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 2.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 2.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 536 1.4E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Gene3D G3DSA:3.30.565.10 373 538 3.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Gene3D G3DSA:1.10.287.130 313 372 9.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Pfam PF00512 His Kinase A (phospho-acceptor) domain 322 384 2.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 SUPERFAMILY SSF52172 570 692 2.56E-25 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06625 ac7baecc632e8ea1e1016e4f16331f20 693 Pfam PF13188 PAS domain 192 244 2.0E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS03040 e17f5674d1ca3b4b4d8be90850c2b9fa 223 Pfam PF06347 Bacterial SH3 domain 167 219 1.9E-4 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 586 4.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Gene3D G3DSA:3.40.50.2300 32 161 1.0E-13 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423 730 896 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423 30 38 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423 340 592 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Gene3D G3DSA:1.20.120.160 877 981 3.3E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Gene3D G3DSA:1.10.287.130 354 422 1.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423:SF382 730 896 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423:SF382 30 38 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PANTHER PTHR24423:SF382 340 592 1.8E-163 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF11849 Domain of unknown function (DUF3369) 152 323 3.4E-40 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SMART SM00387 473 589 2.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SUPERFAMILY SSF55874 415 585 1.7E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SMART SM00448 30 152 0.011 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SMART SM00448 737 853 3.0E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SUPERFAMILY SSF52172 26 164 1.08E-13 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SUPERFAMILY SSF52172 735 865 1.42E-37 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 4.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 4.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 4.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 4.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF00072 Response regulator receiver domain 32 142 1.2E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF00072 Response regulator receiver domain 739 852 2.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Gene3D G3DSA:3.30.565.10 427 587 5.6E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 426 1.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SMART SM00388 361 426 4.9E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SUPERFAMILY SSF47226 875 989 4.45E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Gene3D G3DSA:3.40.50.2300 735 860 1.2E-40 T 22-04-2016 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SUPERFAMILY SSF47384 348 427 3.34E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 Pfam PF01627 Hpt domain 903 975 6.3E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS04535 ea8853f8c4d35e457dd1cfb808162fea 993 SMART SM00073 894 991 2.0E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.8E-54 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 SUPERFAMILY SSF46946 2 121 6.39E-47 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 6.3E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 Gene3D G3DSA:4.10.910.10 74 122 3.0E-29 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.804 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 Gene3D G3DSA:1.10.8.50 2 72 1.5E-29 T 22-04-2016 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 PIRSF PIRSF002134 1 122 2.4E-45 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05805 1389754b830ae6788b4ce287f829653c 122 PANTHER PTHR10871 2 122 3.5E-65 T 22-04-2016 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 PANTHER PTHR30231:SF0 1 210 2.5E-84 T 22-04-2016 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 PANTHER PTHR30231 1 210 2.5E-84 T 22-04-2016 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 Pfam PF00929 Exonuclease 4 163 2.5E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 Gene3D G3DSA:3.30.420.10 1 171 4.3E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 SUPERFAMILY SSF53098 1 169 1.66E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 168 8.2E-50 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 SMART SM00479 2 172 3.6E-50 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS00400 302548726c8f3d97937bde0a255599fc 225 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 222 6.8E-83 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Pfam PF00501 AMP-binding enzyme 75 506 5.1E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 PANTHER PTHR24095 1 630 0.0 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Gene3D G3DSA:3.40.50.980 247 408 2.4E-27 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 SUPERFAMILY SSF56801 4 623 3.01E-160 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Gene3D G3DSA:3.30.300.30 501 608 2.1E-20 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 PANTHER PTHR24095:SF167 1 630 0.0 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Gene3D G3DSA:3.40.50.980 59 246 6.7E-40 T 22-04-2016 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Pfam PF13193 AMP-binding enzyme C-terminal domain 516 594 4.6E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 ProSitePatterns PS00455 Putative AMP-binding domain signature. 242 253 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 9 63 6.5E-24 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMK58_RS05310 afea013c6b895bf6cb7bd34cf149003a 640 Gene3D G3DSA:2.30.38.10 418 497 5.4E-12 T 22-04-2016 AMK58_RS06445 f9d60e99eefe2a4ec4f74d06e77c45c2 110 PANTHER PTHR34182 2 110 1.4E-21 T 22-04-2016 AMK58_RS06445 f9d60e99eefe2a4ec4f74d06e77c45c2 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.6E-14 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK58_RS06445 f9d60e99eefe2a4ec4f74d06e77c45c2 110 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 2.6E-14 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK58_RS06445 f9d60e99eefe2a4ec4f74d06e77c45c2 110 Pfam PF03840 Preprotein translocase SecG subunit 4 70 2.4E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK58_RS06445 f9d60e99eefe2a4ec4f74d06e77c45c2 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 7.1E-21 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 PANTHER PTHR21091 142 272 4.5E-36 T 22-04-2016 AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 SUPERFAMILY SSF51730 6 285 9.22E-100 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 Pfam PF02219 Methylenetetrahydrofolate reductase 5 284 9.5E-99 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 283 7.1E-108 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 Gene3D G3DSA:3.20.20.220 2 288 4.0E-110 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like AMK58_RS08810 8fc3f68fc6e4da01cc8d6a3971564a61 293 PANTHER PTHR21091:SF31 142 272 4.5E-36 T 22-04-2016 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 SUPERFAMILY SSF51230 74 149 9.55E-23 T 22-04-2016 IPR011053 Single hybrid motif AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 3.6E-13 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 3.6E-13 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 3.6E-13 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 11 149 1.8E-37 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 105 122 - T 22-04-2016 IPR001882 Biotin-binding site AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 Gene3D G3DSA:2.40.50.100 72 149 1.7E-27 T 22-04-2016 AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 Pfam PF00364 Biotin-requiring enzyme 76 148 1.3E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK58_RS04225 1d0e27d799fe5e2f7e3bf69a25081b5d 149 PANTHER PTHR23151 6 149 1.9E-29 T 22-04-2016 AMK58_RS02040 71d8307c8b42fe6d3f10415842279215 155 SUPERFAMILY SSF55729 1 150 3.55E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS02040 71d8307c8b42fe6d3f10415842279215 155 PANTHER PTHR23091 1 141 7.5E-20 T 22-04-2016 AMK58_RS02040 71d8307c8b42fe6d3f10415842279215 155 Pfam PF00583 Acetyltransferase (GNAT) family 58 141 7.2E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS02040 71d8307c8b42fe6d3f10415842279215 155 Gene3D G3DSA:3.40.630.30 1 151 1.2E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.3E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.3E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.3E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 1.3E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 66.329 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 SMART SM01130 1 288 1.5E-147 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 SUPERFAMILY SSF51569 2 288 8.37E-107 T 22-04-2016 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PANTHER PTHR12128 1 291 1.7E-130 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 Gene3D G3DSA:3.20.20.70 1 290 3.2E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PANTHER PTHR12128:SF34 1 291 1.7E-130 T 22-04-2016 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 Pfam PF00701 Dihydrodipicolinate synthetase family 3 286 1.0E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 PIRSF PIRSF001365 1 291 4.2E-92 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK58_RS07435 45e56b6b076a6fe0ed8d6ab2cce623bd 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 4.2E-102 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK58_RS03670 2d69fd58639b5aede50c885dea767016 142 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 141 9.0E-24 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain AMK58_RS03670 2d69fd58639b5aede50c885dea767016 142 PANTHER PTHR33507:SF3 1 142 1.1E-32 T 22-04-2016 AMK58_RS03670 2d69fd58639b5aede50c885dea767016 142 PANTHER PTHR33507 1 142 1.1E-32 T 22-04-2016 AMK58_RS03670 2d69fd58639b5aede50c885dea767016 142 Gene3D G3DSA:2.40.50.140 88 141 4.8E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 2 261 6.4E-45 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 SUPERFAMILY SSF53681 124 279 7.41E-29 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 PANTHER PTHR21198 2 283 3.8E-63 T 22-04-2016 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 2 230 1.1E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 PANTHER PTHR21198:SF2 2 283 3.8E-63 T 22-04-2016 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 Hamap MF_00258 Glutamate racemase [murI]. 1 275 28.032 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 SUPERFAMILY SSF53681 2 106 3.11E-26 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS07090 0dd8e9c9374989e88281d6adc0c13533 283 Gene3D G3DSA:3.40.50.1860 2 182 5.7E-44 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 Pfam PF04545 Sigma-70, region 4 136 185 2.9E-11 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 Gene3D G3DSA:1.10.1740.10 15 123 1.6E-23 T 22-04-2016 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 PANTHER PTHR30173 6 190 3.6E-43 T 22-04-2016 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 SUPERFAMILY SSF88659 112 189 1.03E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 Pfam PF04542 Sigma-70 region 2 34 102 8.5E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 Gene3D G3DSA:1.10.10.10 126 189 3.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 187 2.5E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 PANTHER PTHR30173:SF31 6 190 3.6E-43 T 22-04-2016 AMK58_RS01350 8b530e567887ef7bcb84864e97c68719 191 SUPERFAMILY SSF88946 16 115 2.16E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 Gene3D G3DSA:3.30.200.20 1 104 3.6E-40 T 22-04-2016 AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 Gene3D G3DSA:3.90.1200.10 107 310 8.3E-74 T 22-04-2016 AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 4.5E-122 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 Hamap MF_00301 Homoserine kinase [thrB]. 1 326 168.173 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 Pfam PF01636 Phosphotransferase enzyme family 28 257 1.3E-39 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 SUPERFAMILY SSF56112 5 309 2.05E-88 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS09450 c951ac927cd41dbe5ba4979842ce40d0 327 PANTHER PTHR21064 9 288 7.8E-52 T 22-04-2016 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 PIRSF PIRSF002741 2 556 6.9E-69 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 451 2.3E-65 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 PANTHER PTHR30290 5 554 1.8E-79 T 22-04-2016 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 Gene3D G3DSA:3.40.190.10 156 309 5.1E-28 T 22-04-2016 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 Gene3D G3DSA:3.90.76.10 93 155 4.5E-12 T 22-04-2016 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 SUPERFAMILY SSF53850 27 554 3.26E-96 T 22-04-2016 AMK58_RS12090 c9b5b7a4b57605126e113d7e3729dc08 558 Gene3D G3DSA:3.10.105.10 310 525 5.9E-48 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 SUPERFAMILY SSF141523 166 221 1.44E-21 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 SUPERFAMILY SSF141523 271 321 1.44E-21 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 Pfam PF03734 L,D-transpeptidase catalytic domain 168 330 1.1E-25 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 Gene3D G3DSA:2.40.440.10 273 321 6.8E-16 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 Gene3D G3DSA:2.40.440.10 164 212 6.8E-16 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 SUPERFAMILY SSF47090 72 146 1.45E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS04175 b35434e81b944b073f75fab144304081 410 Pfam PF01471 Putative peptidoglycan binding domain 83 140 1.3E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS04175 b35434e81b944b073f75fab144304081 410 PANTHER PTHR41533:SF1 14 385 1.1E-59 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 PANTHER PTHR41533 14 385 1.1E-59 T 22-04-2016 AMK58_RS04175 b35434e81b944b073f75fab144304081 410 Gene3D G3DSA:1.10.101.10 74 148 1.4E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF50129 1224 1386 5.8E-21 T 22-04-2016 IPR011032 GroES-like AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF56801 375 827 9.27E-97 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF56801 89 263 9.27E-97 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.720 1388 1510 5.1E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.30.300.30 701 812 1.1E-18 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF52096 867 1065 8.53E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF52096 1116 1170 8.53E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Pfam PF00501 AMP-binding enzyme 154 706 1.7E-48 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Pfam PF00378 Enoyl-CoA hydratase/isomerase 869 1068 6.7E-35 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Pfam PF13193 AMP-binding enzyme C-terminal domain 730 799 1.2E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 ProSitePatterns PS00455 Putative AMP-binding domain signature. 414 425 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.90.226.10 855 1065 7.5E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF51735 1522 1593 7.23E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 81 117 6.1E-8 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SUPERFAMILY SSF51735 1355 1510 8.78E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.90.180.10 1218 1387 9.4E-21 T 22-04-2016 IPR011032 GroES-like AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.720 1640 1710 9.3E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.720 1521 1591 9.3E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Pfam PF00107 Zinc-binding dehydrogenase 1393 1511 5.0E-10 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 PANTHER PTHR24095 1750 1759 9.4E-121 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 PANTHER PTHR24095 401 643 9.4E-121 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 PANTHER PTHR24095 661 826 9.4E-121 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 PANTHER PTHR24095 81 262 9.4E-121 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 PANTHER PTHR24095 336 372 9.4E-121 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.980 391 420 6.1E-24 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.980 147 267 6.1E-24 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 Gene3D G3DSA:3.40.50.980 421 582 1.8E-23 T 22-04-2016 AMK58_RS10685 985d92faa543b4556af06be41f75cd2a 1804 SMART SM00829 1218 1682 3.0E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS03000 975aa9460bcdf9d677fd501c87bd4560 160 Pfam PF07486 Cell Wall Hydrolase 41 156 7.4E-18 T 22-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMK58_RS09550 65551e8a39e37be75ad5a3c336c38634 477 PIRSF PIRSF004919 18 476 1.0E-134 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS09550 65551e8a39e37be75ad5a3c336c38634 477 SUPERFAMILY SSF111283 22 473 9.68E-130 T 22-04-2016 AMK58_RS09550 65551e8a39e37be75ad5a3c336c38634 477 Pfam PF01523 Putative modulator of DNA gyrase 37 327 2.9E-62 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS09550 65551e8a39e37be75ad5a3c336c38634 477 PANTHER PTHR30624:SF4 13 477 1.8E-208 T 22-04-2016 AMK58_RS09550 65551e8a39e37be75ad5a3c336c38634 477 PANTHER PTHR30624 13 477 1.8E-208 T 22-04-2016 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 PANTHER PTHR11699 2 492 7.2E-300 T 22-04-2016 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 41 488 1.3E-222 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 PANTHER PTHR11699:SF49 2 492 7.2E-300 T 22-04-2016 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 SUPERFAMILY SSF53720 15 492 5.89E-171 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 Pfam PF00171 Aldehyde dehydrogenase family 30 489 6.3E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 Gene3D G3DSA:3.40.605.10 20 279 5.4E-100 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 Gene3D G3DSA:3.40.309.10 280 467 4.5E-70 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK58_RS08630 97afac10c576d3cb884032d87984ac1b 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 PANTHER PTHR21015:SF22 9 379 1.3E-80 T 22-04-2016 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 PANTHER PTHR21015 9 379 1.3E-80 T 22-04-2016 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 191 357 6.1E-35 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 9 366 31.762 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 361 6.0E-80 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 SUPERFAMILY SSF53756 8 366 1.45E-96 T 22-04-2016 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 Gene3D G3DSA:3.40.50.2000 6 202 1.1E-47 T 22-04-2016 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 144 6.0E-28 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS03925 13f31c5aa5f9b19cc12f57250eaae98f 379 Gene3D G3DSA:3.40.50.2000 262 346 3.3E-8 T 22-04-2016 AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 Pfam PF00460 Flagella basal body rod protein 6 34 3.7E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.1E-26 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 SUPERFAMILY SSF117143 93 222 6.15E-37 T 22-04-2016 AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 6.7E-31 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.8E-47 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 7.5E-109 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 PANTHER PTHR30435:SF19 1 261 3.7E-116 T 22-04-2016 AMK58_RS10160 2b535f78ae537284fa6c8aa8e920bf82 261 PANTHER PTHR30435 1 261 3.7E-116 T 22-04-2016 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 SMART SM00228 119 198 2.0E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 Pfam PF02163 Peptidase family M50 14 354 1.4E-76 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 Gene3D G3DSA:2.30.42.10 108 208 1.2E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 144 366 1.3E-48 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 144 184 2.5E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 PANTHER PTHR22939:SF78 144 372 2.2E-67 T 22-04-2016 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 PANTHER PTHR22939 144 372 2.2E-67 T 22-04-2016 AMK58_RS06300 6c7416b9b10c67004bc62667b5114fd8 377 SUPERFAMILY SSF50156 101 207 1.71E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS02385 a06e892dfafa269cf378641486033d66 208 PANTHER PTHR35147 2 205 4.3E-65 T 22-04-2016 AMK58_RS02385 a06e892dfafa269cf378641486033d66 208 PANTHER PTHR35147:SF2 2 205 4.3E-65 T 22-04-2016 AMK58_RS02385 a06e892dfafa269cf378641486033d66 208 Pfam PF03975 CheD chemotactic sensory transduction 71 172 2.3E-28 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMK58_RS02385 a06e892dfafa269cf378641486033d66 208 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 24 177 28.036 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMK58_RS02385 a06e892dfafa269cf378641486033d66 208 SUPERFAMILY SSF64438 28 176 3.11E-46 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 SUPERFAMILY SSF56003 132 766 1.7E-192 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 187 291 1.5E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 1.2E-27 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 465 612 5.0E-43 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 615 766 1.5E-61 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 373 464 1.5E-61 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 PANTHER PTHR11908:SF85 2 770 9.3E-280 T 22-04-2016 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 128 186 5.3E-47 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.30.365.10 294 370 5.3E-47 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 SMART SM01008 20 140 4.5E-50 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Gene3D G3DSA:3.90.1170.50 6 127 2.2E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 701 6.7E-166 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 PANTHER PTHR11908 2 770 9.3E-280 T 22-04-2016 AMK58_RS05690 6c373a48f925c1b19c85e0c0fecc3ae9 772 SUPERFAMILY SSF54665 4 162 5.89E-45 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 SUPERFAMILY SSF52317 1 232 1.07E-74 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 219 2.9E-43 T 22-04-2016 AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 Gene3D G3DSA:3.40.50.880 1 232 5.2E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 231 43.262 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 PIRSF PIRSF001586 1 234 2.1E-86 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 232 9.5E-95 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 PANTHER PTHR10099 1 233 2.5E-102 T 22-04-2016 AMK58_RS11460 90678084c6c1bbc01e10af96535df997 234 SMART SM01211 1 233 4.8E-123 T 22-04-2016 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 Gene3D G3DSA:3.40.50.2000 10 150 3.7E-20 T 22-04-2016 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 168 276 1.4E-19 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 PANTHER PTHR30160 1 273 3.8E-19 T 22-04-2016 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 SUPERFAMILY SSF53756 10 309 7.53E-53 T 22-04-2016 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 PANTHER PTHR30160:SF7 1 273 3.8E-19 T 22-04-2016 AMK58_RS05245 6fa6d40d8cc7bb2c2950999f23d5c4be 314 Gene3D G3DSA:3.40.50.2000 166 276 3.2E-28 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 269 281 4.5E-21 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 4.5E-21 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 322 4.5E-21 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 4.5E-21 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 Pfam PF12161 HsdM N-terminal domain 4 130 2.3E-16 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 SUPERFAMILY SSF53335 4 481 1.17E-113 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PANTHER PTHR30195 140 376 3.8E-45 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 PANTHER PTHR30195:SF2 140 376 3.8E-45 T 22-04-2016 AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 Gene3D G3DSA:3.40.50.150 164 395 1.8E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS06810 3b51bd9cdd1e40b0c0ab1897e84b0698 485 Pfam PF02384 N-6 DNA Methylase 140 446 2.0E-73 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMK58_RS12050 018f7796e97ede284e490e2745b79eec 273 PIRSF PIRSF034285 12 268 6.6E-67 T 22-04-2016 IPR017026 Inducible mutagenesis protein A AMK58_RS12050 018f7796e97ede284e490e2745b79eec 273 SUPERFAMILY SSF52540 61 174 8.41E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12050 018f7796e97ede284e490e2745b79eec 273 Gene3D G3DSA:3.40.50.300 72 174 3.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 SUPERFAMILY SSF51735 121 290 1.74E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 329 1.3E-121 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 Gene3D G3DSA:3.40.50.720 129 297 1.4E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 Pfam PF00107 Zinc-binding dehydrogenase 163 274 5.5E-9 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 Gene3D G3DSA:3.90.180.10 26 91 6.2E-8 T 22-04-2016 IPR011032 GroES-like AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 SMART SM00829 19 327 1.3E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 SUPERFAMILY SSF50129 6 146 1.28E-37 T 22-04-2016 IPR011032 GroES-like AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 92 2.4E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 PANTHER PTHR11695 19 329 4.2E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK58_RS09380 750b28e71542e8dff14f60cc0fb3fe18 331 PANTHER PTHR11695:SF13 19 329 4.2E-128 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 Gene3D G3DSA:3.40.50.150 119 291 2.8E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 PANTHER PTHR18895 4 296 4.1E-37 T 22-04-2016 AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 PANTHER PTHR18895:SF3 4 296 4.1E-37 T 22-04-2016 AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 SUPERFAMILY SSF53335 52 293 2.2E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 PIRSF PIRSF000401 20 298 1.6E-50 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK58_RS03820 3435325a8ff9b71adfcd85888332f403 304 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 64 296 1.3E-49 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 Gene3D G3DSA:3.40.50.300 4 228 2.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 SMART SM00382 38 220 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220 274 298 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220 10 250 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220 319 428 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220:SF589 274 298 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220:SF589 10 250 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 PANTHER PTHR24220:SF589 319 428 1.5E-126 T 22-04-2016 AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 SUPERFAMILY SSF52540 10 250 3.55E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 Pfam PF09821 C-terminal AAA-associated domain 309 427 1.3E-39 T 22-04-2016 IPR018632 C-terminal AAA-associated domain AMK58_RS03630 d5d2892f930ded3d91eff968212a9496 439 Pfam PF00005 ABC transporter 29 168 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 SUPERFAMILY SSF52540 3 267 1.01E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 PANTHER PTHR13696:SF1 2 258 3.3E-88 T 22-04-2016 AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 Gene3D G3DSA:3.40.50.300 2 247 9.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.7E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 267 6.3E-108 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 PIRSF PIRSF003092 1 271 9.5E-87 T 22-04-2016 IPR025501 ATP binding protein MinD AMK58_RS04425 eeee21cf6f5ea3b572d1b45e6188d20c 271 PANTHER PTHR13696 2 258 3.3E-88 T 22-04-2016 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 SUPERFAMILY SSF143430 1 89 9.81E-26 T 22-04-2016 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 88 15.66 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 Pfam PF09827 CRISPR associated protein Cas2 1 78 7.3E-24 T 22-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 89 3.8E-20 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 PANTHER PTHR34405 1 95 5.6E-21 T 22-04-2016 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 Gene3D G3DSA:3.30.70.240 1 72 6.6E-27 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 PANTHER PTHR34405:SF1 1 95 5.6E-21 T 22-04-2016 AMK58_RS11240 6d4f4b36cc7b45877f1f8039ab157e81 96 PIRSF PIRSF032582 1 96 7.8E-39 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 169 0.0024 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 279 3.0E-128 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 PANTHER PTHR19136 16 279 3.2E-110 T 22-04-2016 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Gene3D G3DSA:2.160.10.10 92 244 5.0E-54 T 22-04-2016 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 PANTHER PTHR19136:SF52 16 279 3.2E-110 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 SUPERFAMILY SSF51161 7 264 9.15E-64 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 178 213 8.6E-12 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Gene3D G3DSA:1.10.166.10 3 71 4.3E-28 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 280 55.715 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK58_RS12295 1945ec5aef6f373684a86e9d77ac57c1 280 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 1.6E-23 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 276 393 1.1E-9 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 PANTHER PTHR11006 114 171 1.1E-67 T 22-04-2016 IPR025799 Protein arginine N-methyltransferase GO:0006479|GO:0008168 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 PANTHER PTHR11006 240 538 1.1E-67 T 22-04-2016 IPR025799 Protein arginine N-methyltransferase GO:0006479|GO:0008168 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Gene3D G3DSA:3.40.50.150 251 394 4.4E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 PANTHER PTHR11006:SF60 114 171 1.1E-67 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 PANTHER PTHR11006:SF60 240 538 1.1E-67 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Gene3D G3DSA:1.25.40.10 5 250 9.2E-56 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SUPERFAMILY SSF53335 257 538 6.56E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Gene3D G3DSA:2.70.160.11 398 536 2.3E-19 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 106 139 0.0041 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 174 207 4.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 72 105 0.24 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 140 173 7.4E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 208 241 2.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SMART SM00028 38 71 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 SUPERFAMILY SSF48452 14 243 2.15E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Pfam PF13432 Tetratricopeptide repeat 146 205 2.0E-10 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Pfam PF13432 Tetratricopeptide repeat 78 140 1.5E-7 T 22-04-2016 AMK58_RS02135 c3ba4dd7be2f673acbe24dac194a4f93 544 Pfam PF13432 Tetratricopeptide repeat 11 72 2.5E-6 T 22-04-2016 AMK58_RS00435 093bc44041d49227f947f23e5ed59067 74 SMART SM00966 7 52 4.3E-6 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 AMK58_RS00435 093bc44041d49227f947f23e5ed59067 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 47 1.6E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 AMK58_RS00435 093bc44041d49227f947f23e5ed59067 74 Gene3D G3DSA:2.10.260.10 1 45 7.9E-14 T 22-04-2016 AMK58_RS00435 093bc44041d49227f947f23e5ed59067 74 SUPERFAMILY SSF89447 2 54 4.53E-12 T 22-04-2016 AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 PANTHER PTHR11061 8 449 1.1E-55 T 22-04-2016 AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 Gene3D G3DSA:3.40.50.150 274 449 1.1E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 SUPERFAMILY SSF53335 90 448 4.29E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 374 446 8.2E-8 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 SUPERFAMILY SSF50249 28 88 1.09E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00965 283035852c92e2c0b38ac2fe941d124f 450 Gene3D G3DSA:2.40.50.140 26 101 3.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 PANTHER PTHR31637:SF0 8 515 1.2E-240 T 22-04-2016 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 SUPERFAMILY SSF53649 310 511 5.63E-75 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 SUPERFAMILY SSF53649 8 81 5.63E-75 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 9 511 6.7E-206 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Pfam PF01676 Metalloenzyme superfamily 9 500 2.7E-73 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 296 1.4E-71 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 PIRSF PIRSF001492 2 514 1.1E-198 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 8 512 47.792 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Gene3D G3DSA:3.40.720.10 314 512 7.0E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Gene3D G3DSA:3.40.720.10 8 81 7.0E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 Gene3D G3DSA:3.40.1450.10 82 310 2.2E-83 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 SUPERFAMILY SSF64158 81 300 1.09E-75 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS11730 42d5bbe60ebc2181c76c8794af2a0bcf 521 PANTHER PTHR31637 8 515 1.2E-240 T 22-04-2016 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 SUPERFAMILY SSF55909 2 337 5.89E-126 T 22-04-2016 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 Gene3D G3DSA:3.75.10.10 2 337 3.6E-133 T 22-04-2016 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 PANTHER PTHR31377:SF0 1 337 3.7E-138 T 22-04-2016 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 11 336 7.3E-119 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 Hamap MF_01841 Agmatine deiminase [aguA]. 2 337 48.599 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMK58_RS07835 9a89ffe114ae6dc087f1c2276ba60588 338 PANTHER PTHR31377 1 337 3.7E-138 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 Gene3D G3DSA:3.30.565.10 328 479 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423 30 39 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423 255 486 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423 220 236 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423:SF439 30 39 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423:SF439 255 486 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PANTHER PTHR24423:SF439 220 236 7.8E-80 T 22-04-2016 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 SUPERFAMILY SSF55874 313 477 3.27E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 SMART SM00388 259 324 1.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 477 1.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 SMART SM00387 368 479 2.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 2.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 SUPERFAMILY SSF47384 245 324 3.73E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 44 105 8.5E-9 T 22-04-2016 IPR029095 NarX-like, N-terminal AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 Gene3D G3DSA:1.10.287.130 254 320 4.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS07300 df4074363e4af202f5fe1e71debb80f6 487 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 324 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS24895 05bf7c86230dd8500ab6b7c789a5d06e 170 SUPERFAMILY SSF55729 52 170 5.15E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS24895 05bf7c86230dd8500ab6b7c789a5d06e 170 Pfam PF13420 Acetyltransferase (GNAT) domain 53 170 1.2E-13 T 22-04-2016 AMK58_RS24895 05bf7c86230dd8500ab6b7c789a5d06e 170 Gene3D G3DSA:3.40.630.30 52 170 1.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS24895 05bf7c86230dd8500ab6b7c789a5d06e 170 PANTHER PTHR23091:SF183 22 170 1.1E-24 T 22-04-2016 AMK58_RS24895 05bf7c86230dd8500ab6b7c789a5d06e 170 PANTHER PTHR23091 22 170 1.1E-24 T 22-04-2016 AMK58_RS02440 274a04e354bdbeec205551037bd4fc76 370 SUPERFAMILY SSF110997 292 359 8.76E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS02440 274a04e354bdbeec205551037bd4fc76 370 Pfam PF05036 Sporulation related domain 292 367 4.6E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS02440 274a04e354bdbeec205551037bd4fc76 370 Gene3D G3DSA:3.30.70.1070 289 367 3.2E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 Pfam PF02576 Putative ribosome maturation factor RimP 10 147 5.4E-42 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 Gene3D G3DSA:3.30.300.70 4 80 5.5E-27 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 SUPERFAMILY SSF74942 84 152 5.23E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 SUPERFAMILY SSF75420 4 83 2.09E-22 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 Gene3D G3DSA:2.30.30.180 88 148 5.7E-11 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 151 23.78 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 PANTHER PTHR33867 1 157 5.9E-40 T 22-04-2016 AMK58_RS00745 832f39fde8e2c2ee4f6e8b2e8b730e55 161 PANTHER PTHR33867:SF1 1 157 5.9E-40 T 22-04-2016 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 Gene3D G3DSA:1.10.8.50 135 280 5.1E-46 T 22-04-2016 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 4.7E-36 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 SMART SM00898 2 118 7.4E-49 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 SUPERFAMILY SSF81624 2 143 4.45E-39 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 PANTHER PTHR22993:SF15 1 280 2.4E-110 T 22-04-2016 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 SMART SM01232 134 226 1.2E-46 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 PANTHER PTHR22993 1 280 2.4E-110 T 22-04-2016 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 SUPERFAMILY SSF46946 134 222 2.36E-27 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 SUPERFAMILY SSF57716 222 279 1.17E-12 T 22-04-2016 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 280 40.673 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 279 2.0E-85 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 1.7E-24 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMK58_RS00890 07fc3175fb8eb6ba46f6dbc702e3f9eb 280 Gene3D G3DSA:3.20.190.10 2 134 8.7E-40 T 22-04-2016 AMK58_RS00675 031103a1233b479f1da6f0c95c0ced8a 170 PANTHER PTHR23091 10 164 1.1E-19 T 22-04-2016 AMK58_RS00675 031103a1233b479f1da6f0c95c0ced8a 170 Pfam PF00583 Acetyltransferase (GNAT) family 68 141 2.3E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS00675 031103a1233b479f1da6f0c95c0ced8a 170 SUPERFAMILY SSF55729 11 151 2.44E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00675 031103a1233b479f1da6f0c95c0ced8a 170 Gene3D G3DSA:3.40.630.30 7 153 4.0E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Gene3D G3DSA:1.25.40.10 185 373 1.3E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Gene3D G3DSA:3.40.50.2000 575 654 6.6E-12 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 PANTHER PTHR23083 4 146 1.8E-41 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 PANTHER PTHR23083 187 374 1.8E-41 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 282 315 4.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 38 71 39.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 248 281 0.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 4 37 360.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 106 139 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 316 349 24.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SMART SM00028 72 105 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SUPERFAMILY SSF48452 186 375 2.53E-40 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SUPERFAMILY SSF48452 51 145 2.53E-40 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Pfam PF13432 Tetratricopeptide repeat 299 348 3.6E-5 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Pfam PF13432 Tetratricopeptide repeat 186 248 0.0022 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Pfam PF13432 Tetratricopeptide repeat 16 72 0.0015 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Pfam PF13432 Tetratricopeptide repeat 76 139 4.4E-6 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 SUPERFAMILY SSF53756 402 672 2.17E-20 T 22-04-2016 AMK58_RS00885 a711c7cda96c2bc685b8d79704873235 680 Gene3D G3DSA:1.25.40.10 10 146 3.9E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 PANTHER PTHR12318:SF0 1 249 1.0E-35 T 22-04-2016 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 PANTHER PTHR12318 1 249 1.0E-35 T 22-04-2016 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 Gene3D G3DSA:3.90.79.10 6 84 8.4E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 Gene3D G3DSA:3.90.79.10 119 177 8.4E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 SUPERFAMILY SSF55811 4 84 1.82E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07000 82a3481f468290cbac30d62e5a77d750 250 SUPERFAMILY SSF55811 119 181 1.82E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 64 77 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 PANTHER PTHR32119:SF2 1 237 8.5E-88 T 22-04-2016 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 Gene3D G3DSA:3.20.20.70 10 236 2.5E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 SUPERFAMILY SSF51366 10 236 1.63E-68 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 9 237 32.493 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 SMART SM00934 11 233 2.7E-80 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 PANTHER PTHR32119 1 237 8.5E-88 T 22-04-2016 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 233 9.5E-48 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS12610 c291e711fa6bd53d48f3335cc748583d 237 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 233 2.8E-40 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS00805 5032e40c93856f5052a2e718cc38f58a 249 Gene3D G3DSA:3.20.20.190 5 241 6.4E-68 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK58_RS00805 5032e40c93856f5052a2e718cc38f58a 249 PANTHER PTHR23344:SF20 6 243 2.3E-62 T 22-04-2016 AMK58_RS00805 5032e40c93856f5052a2e718cc38f58a 249 SUPERFAMILY SSF51695 6 240 4.19E-69 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK58_RS00805 5032e40c93856f5052a2e718cc38f58a 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 11 237 2.2E-44 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMK58_RS00805 5032e40c93856f5052a2e718cc38f58a 249 PANTHER PTHR23344 6 243 2.3E-62 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 SUPERFAMILY SSF55718 289 407 1.18E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 Gene3D G3DSA:3.40.630.30 55 128 3.1E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 Gene3D G3DSA:3.30.1050.10 279 396 1.3E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 Pfam PF13530 Sterol carrier protein domain 180 404 1.2E-39 T 22-04-2016 IPR025559 Enhanced intracellular survival protein domain AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 SUPERFAMILY SSF55729 8 288 2.64E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 PANTHER PTHR37817 1 407 2.7E-37 T 22-04-2016 AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 Pfam PF13527 Acetyltransferase (GNAT) domain 10 131 1.3E-16 T 22-04-2016 AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 PANTHER PTHR37817:SF1 1 407 2.7E-37 T 22-04-2016 AMK58_RS05230 142ee0d1afa425883fae3fe6e0a81650 407 Gene3D G3DSA:3.40.630.30 129 278 7.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070 327 839 1.8E-87 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070 120 197 1.8E-87 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070 1 90 1.8E-87 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070 868 889 1.8E-87 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:3.40.50.300 128 190 6.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:3.40.50.300 20 77 6.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:3.40.50.300 362 481 6.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 SUPERFAMILY SSF52540 7 81 3.01E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 SUPERFAMILY SSF52540 120 218 3.01E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 SUPERFAMILY SSF52540 869 895 3.01E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 SUPERFAMILY SSF52540 352 840 3.01E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:3.40.50.300 794 913 7.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:3.40.50.300 498 633 7.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Gene3D G3DSA:1.10.486.10 642 784 4.5E-7 T 22-04-2016 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 SUPERFAMILY SSF52980 1004 1134 3.16E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070:SF23 327 839 1.8E-87 T 22-04-2016 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070:SF23 120 197 1.8E-87 T 22-04-2016 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070:SF23 1 90 1.8E-87 T 22-04-2016 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 PANTHER PTHR11070:SF23 868 889 1.8E-87 T 22-04-2016 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 479 2.5E-49 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Pfam PF13361 UvrD-like helicase C-terminal domain 769 891 8.6E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 18 1154 0.0 T 22-04-2016 IPR014151 DNA helicase, AddA type AMK58_RS01555 324a901bc7ca8607afec5301a85713de 1156 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1001 1139 4.9E-11 T 22-04-2016 AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 SUPERFAMILY SSF51621 6 233 1.34E-67 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 1.4E-47 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 PIRSF PIRSF015582 1 292 4.4E-84 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 Gene3D G3DSA:3.20.20.60 4 234 4.0E-75 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 PANTHER PTHR32308:SF0 2 288 2.6E-87 T 22-04-2016 AMK58_RS02520 b6934e2a472dce4084a220ad6ac8cc70 293 PANTHER PTHR32308 2 288 2.6E-87 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 ProSitePatterns PS00450 Aconitase family signature 1. 430 446 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Gene3D G3DSA:3.30.499.10 25 254 4.8E-81 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Gene3D G3DSA:3.30.499.10 375 578 6.6E-65 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 ProSitePatterns PS01244 Aconitase family signature 2. 496 509 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Gene3D G3DSA:3.20.19.10 641 894 1.8E-81 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Pfam PF00330 Aconitase family (aconitate hydratase) 79 565 6.5E-190 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 496 509 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 378 392 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 284 297 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 298 311 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 174 182 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 208 221 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 222 237 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 434 445 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PRINTS PR00415 Aconitase family signature 150 163 1.9E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 SUPERFAMILY SSF53732 8 629 2.75E-230 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670 11 399 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Gene3D G3DSA:3.40.1060.10 255 373 4.9E-36 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670 670 715 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670 754 896 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670 419 654 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670:SF1 670 715 0.0 T 22-04-2016 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670:SF1 11 399 0.0 T 22-04-2016 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670:SF1 754 896 0.0 T 22-04-2016 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 PANTHER PTHR11670:SF1 419 654 0.0 T 22-04-2016 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 Pfam PF00694 Aconitase C-terminal domain 696 822 1.0E-46 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 894 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AMK58_RS12755 224d3d759ef00b2d59423214d47f14c7 896 SUPERFAMILY SSF52016 633 894 4.12E-90 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK58_RS02310 c5886695218d13775c1457964eda563e 446 Pfam PF07044 Protein of unknown function (DUF1329) 85 439 2.6E-110 T 22-04-2016 IPR010752 Protein of unknown function DUF1329 AMK58_RS02310 c5886695218d13775c1457964eda563e 446 Gene3D G3DSA:2.50.20.10 333 441 2.0E-23 T 22-04-2016 AMK58_RS02310 c5886695218d13775c1457964eda563e 446 Gene3D G3DSA:2.50.20.10 157 300 2.0E-23 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 Gene3D G3DSA:2.40.30.10 845 941 6.1E-13 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 SUPERFAMILY SSF63380 844 942 2.72E-11 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 SUPERFAMILY SSF52343 939 1119 5.46E-13 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 SUPERFAMILY SSF51971 377 434 2.55E-16 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 SUPERFAMILY SSF51971 675 732 2.55E-16 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 SUPERFAMILY SSF51971 466 578 2.55E-16 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 Gene3D G3DSA:3.40.50.720 377 575 6.6E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 Gene3D G3DSA:3.40.50.80 945 1065 3.1E-11 T 22-04-2016 AMK58_RS13205 6a03ee04a37b0e9b3101f670e179a1b1 1164 Gene3D G3DSA:1.10.1060.10 223 343 5.5E-7 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Pfam PF00072 Response regulator receiver domain 699 810 2.7E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SMART SM00387 564 675 3.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SUPERFAMILY SSF55874 510 676 7.2E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SUPERFAMILY SSF55785 324 444 2.42E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SMART SM00448 697 810 4.5E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SUPERFAMILY SSF52172 696 819 8.97E-25 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PANTHER PTHR24423:SF439 4 10 7.8E-118 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PANTHER PTHR24423:SF439 301 810 7.8E-118 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Gene3D G3DSA:3.40.50.2300 695 815 7.0E-24 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Gene3D G3DSA:3.30.565.10 522 679 2.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 674 9.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 5.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 5.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 5.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 5.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Gene3D G3DSA:3.30.450.20 323 419 2.8E-10 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Pfam PF13426 PAS domain 324 434 1.2E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SMART SM00388 455 520 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Gene3D G3DSA:1.10.287.130 462 516 1.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 318 442 1.0E-7 T 22-04-2016 IPR000014 PAS domain AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PANTHER PTHR24423 4 10 7.8E-118 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 PANTHER PTHR24423 301 810 7.8E-118 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Gene3D G3DSA:3.30.450.20 420 461 2.1E-9 T 22-04-2016 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 SUPERFAMILY SSF47384 441 520 2.94E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS00095 37c42ada2fc5bb75f958b71e3146db91 837 Pfam PF00512 His Kinase A (phospho-acceptor) domain 456 520 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 PANTHER PTHR11019 139 316 1.0E-44 T 22-04-2016 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 PANTHER PTHR11019 47 122 1.0E-44 T 22-04-2016 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 Gene3D G3DSA:1.10.10.60 214 270 3.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 Pfam PF12852 Cupin 12 201 2.4E-31 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 Gene3D G3DSA:1.10.10.60 271 317 9.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 SUPERFAMILY SSF46689 216 267 2.55E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 PANTHER PTHR11019:SF77 139 316 1.0E-44 T 22-04-2016 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 PANTHER PTHR11019:SF77 47 122 1.0E-44 T 22-04-2016 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 Pfam PF12833 Helix-turn-helix domain 239 316 8.9E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 SMART SM00342 233 316 1.1E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 SUPERFAMILY SSF46689 269 317 3.32E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02885 da9f120a32855d5413ab66f2d6963c72 320 Gene3D G3DSA:2.60.120.10 25 86 3.1E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 SUPERFAMILY SSF46785 7 142 1.89E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 PANTHER PTHR33164 5 152 4.6E-16 T 22-04-2016 AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 Pfam PF13463 Winged helix DNA-binding domain 36 100 1.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 Gene3D G3DSA:1.10.10.10 9 143 6.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07480 9e188d9b10da4275a38b510ecf064351 157 SMART SM00347 28 128 3.6E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS12550 838ea6acc29cc2ffe3248748d3b0a999 90 SUPERFAMILY SSF82657 2 88 5.1E-27 T 22-04-2016 IPR002634 BolA protein AMK58_RS12550 838ea6acc29cc2ffe3248748d3b0a999 90 Pfam PF01722 BolA-like protein 11 88 9.8E-31 T 22-04-2016 IPR002634 BolA protein AMK58_RS12550 838ea6acc29cc2ffe3248748d3b0a999 90 Gene3D G3DSA:3.30.70.1500 4 85 4.4E-29 T 22-04-2016 AMK58_RS12550 838ea6acc29cc2ffe3248748d3b0a999 90 PIRSF PIRSF003113 1 90 1.1E-30 T 22-04-2016 IPR002634 BolA protein AMK58_RS12550 838ea6acc29cc2ffe3248748d3b0a999 90 PANTHER PTHR12735 1 90 2.0E-30 T 22-04-2016 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 SUPERFAMILY SSF55811 5 157 7.45E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 PANTHER PTHR11839 13 157 1.7E-38 T 22-04-2016 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 Gene3D G3DSA:3.90.79.10 8 156 7.6E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 7 160 33.878 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 PANTHER PTHR11839:SF13 13 157 1.7E-38 T 22-04-2016 AMK58_RS11750 7074c1c5bb87f5cfbb2d6558e9e8e9d3 165 Pfam PF00293 NUDIX domain 13 149 6.6E-25 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 Gene3D G3DSA:3.30.70.270 393 554 2.9E-47 T 22-04-2016 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 PANTHER PTHR10799 239 390 3.5E-22 T 22-04-2016 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 119 170 6.7E-6 T 22-04-2016 IPR000014 PAS domain AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 545 1.1E-38 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 549 4.7E-40 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 SMART SM00267 380 550 8.5E-55 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 Gene3D G3DSA:3.30.450.20 109 225 3.0E-11 T 22-04-2016 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 SUPERFAMILY SSF55781 241 380 8.07E-9 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 Gene3D G3DSA:3.30.450.40 236 392 4.4E-10 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 SUPERFAMILY SSF55785 106 225 4.71E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 SUPERFAMILY SSF55073 396 549 3.06E-43 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 PANTHER PTHR10799:SF750 422 543 3.5E-22 T 22-04-2016 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 PANTHER PTHR10799 422 543 3.5E-22 T 22-04-2016 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 SMART SM00065 259 388 0.0089 T 22-04-2016 IPR003018 GAF domain GO:0005515 AMK58_RS12285 94c03374284ad16c5195dbff8dee041b 564 PANTHER PTHR10799:SF750 239 390 3.5E-22 T 22-04-2016 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 PANTHER PTHR26402 8 129 1.4E-38 T 22-04-2016 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 SMART SM00331 169 392 0.0019 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 PANTHER PTHR26402:SF50 8 129 1.4E-38 T 22-04-2016 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 196 390 1.3E-21 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 Gene3D G3DSA:3.40.50.2300 8 133 2.3E-38 T 22-04-2016 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 SUPERFAMILY SSF52172 8 154 3.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 SMART SM00448 8 122 2.9E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02360 23c51fcaaef9957029227e55cc3fe94f 396 Pfam PF00072 Response regulator receiver domain 10 123 9.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 SUPERFAMILY SSF56784 6 214 1.47E-50 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 Gene3D G3DSA:3.40.50.1000 91 214 2.1E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 Gene3D G3DSA:3.40.50.1000 5 19 2.1E-40 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 7 181 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 187 1.0E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 187 3.1E-31 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PANTHER PTHR18901:SF33 6 240 1.9E-69 T 22-04-2016 AMK58_RS05760 4209be892f8fa2b82b85017723c4e735 252 PANTHER PTHR18901 6 240 1.9E-69 T 22-04-2016 AMK58_RS04180 427c87603dc93f5a4cb1c769ad2c1cb2 198 Gene3D G3DSA:3.30.1380.10 84 198 1.2E-27 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS04180 427c87603dc93f5a4cb1c769ad2c1cb2 198 PANTHER PTHR37425 1 198 6.9E-55 T 22-04-2016 AMK58_RS04180 427c87603dc93f5a4cb1c769ad2c1cb2 198 Pfam PF05951 Bacterial protein of unknown function (DUF882) 52 198 2.3E-58 T 22-04-2016 IPR010275 Protein of unknown function DUF882 AMK58_RS04180 427c87603dc93f5a4cb1c769ad2c1cb2 198 SUPERFAMILY SSF55166 82 198 8.11E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 PANTHER PTHR19370 7 257 4.7E-114 T 22-04-2016 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 SUPERFAMILY SSF63380 4 99 5.73E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 2.7E-6 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 2.8E-6 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 Gene3D G3DSA:2.40.30.10 5 93 3.3E-30 T 22-04-2016 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 PANTHER PTHR19370:SF98 7 257 4.7E-114 T 22-04-2016 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 Gene3D G3DSA:3.40.50.80 97 256 4.7E-44 T 22-04-2016 AMK58_RS13265 6090dd51e8aef69ba19ead3be7aeb2ff 257 SUPERFAMILY SSF52343 103 255 2.75E-37 T 22-04-2016 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 PANTHER PTHR21535 66 256 3.4E-37 T 22-04-2016 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 Pfam PF01544 CorA-like Mg2+ transporter protein 70 269 5.2E-17 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 Gene3D G3DSA:3.30.460.20 37 168 3.2E-4 T 22-04-2016 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 Gene3D G3DSA:1.20.58.340 169 210 2.5E-4 T 22-04-2016 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 PANTHER PTHR21535:SF37 66 256 3.4E-37 T 22-04-2016 AMK58_RS22865 6bfa7a547c3237560ee38c286e7b29f2 273 SUPERFAMILY SSF143865 37 270 3.53E-32 T 22-04-2016 AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 PANTHER PTHR30124:SF0 89 395 3.6E-106 T 22-04-2016 AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 PANTHER PTHR30124 89 395 3.6E-106 T 22-04-2016 AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 SUPERFAMILY SSF50685 36 399 8.37E-130 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 Pfam PF06725 3D domain 318 392 8.3E-21 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 SMART SM00925 142 299 1.0E-88 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 PIRSF PIRSF019422 1 401 5.3E-142 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 Gene3D G3DSA:2.40.40.10 43 207 2.4E-35 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 Gene3D G3DSA:2.40.40.10 210 399 2.6E-56 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS00470 1a0f03f49c172219e0dc48cbefcb05ce 401 Pfam PF03562 MltA specific insert domain 54 299 1.0E-84 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK58_RS10260 b951851be2e4aba8e5ed44ac82351e0f 153 SUPERFAMILY SSF49764 34 138 3.84E-20 T 22-04-2016 IPR008978 HSP20-like chaperone AMK58_RS10260 b951851be2e4aba8e5ed44ac82351e0f 153 Gene3D G3DSA:2.60.40.790 7 138 2.4E-16 T 22-04-2016 IPR008978 HSP20-like chaperone AMK58_RS10260 b951851be2e4aba8e5ed44ac82351e0f 153 Pfam PF00011 Hsp20/alpha crystallin family 44 138 1.4E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK58_RS10260 b951851be2e4aba8e5ed44ac82351e0f 153 PANTHER PTHR11527:SF145 1 146 2.1E-52 T 22-04-2016 AMK58_RS10260 b951851be2e4aba8e5ed44ac82351e0f 153 PANTHER PTHR11527 1 146 2.1E-52 T 22-04-2016 IPR031107 Small heat shock protein HSP20 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 485 4.2E-10 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:3.30.565.10 605 766 4.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 602 6.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF52172 787 904 1.05E-21 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00388 537 602 8.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:3.30.450.20 233 348 1.1E-11 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:3.30.450.20 108 225 3.2E-14 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:3.30.450.20 349 478 1.7E-22 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF55785 101 224 3.14E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF55785 230 346 2.62E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 6.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 718 6.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 744 6.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 763 6.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00387 646 766 1.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423:SF439 35 49 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423:SF439 225 346 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423:SF439 516 904 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00448 788 900 1.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF55874 593 764 4.71E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF00072 Response regulator receiver domain 790 899 9.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:1.10.287.130 530 598 9.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF55785 345 476 1.68E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00091 360 426 6.0E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00091 110 171 76.0 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SMART SM00091 243 311 1.9 T 22-04-2016 IPR000014 PAS domain AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 SUPERFAMILY SSF47384 522 602 1.45E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423 35 49 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423 225 346 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 PANTHER PTHR24423 516 904 7.9E-156 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF12860 PAS fold 116 230 5.7E-19 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF12860 PAS fold 249 353 3.0E-24 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Gene3D G3DSA:3.40.50.2300 785 904 1.8E-20 T 22-04-2016 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF08448 PAS fold 367 479 6.6E-17 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS03470 482da34c15e36e874d38def03d2b9ae9 905 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 647 764 3.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05395 216816b5169c6707e68da9eb415e1ab2 95 Pfam PF07045 Domain of unknown function (DUF1330) 2 94 3.3E-36 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 AMK58_RS05395 216816b5169c6707e68da9eb415e1ab2 95 PANTHER PTHR41521 1 94 2.6E-24 T 22-04-2016 AMK58_RS05395 216816b5169c6707e68da9eb415e1ab2 95 Gene3D G3DSA:3.30.70.900 1 94 4.0E-36 T 22-04-2016 AMK58_RS05395 216816b5169c6707e68da9eb415e1ab2 95 SUPERFAMILY SSF54909 1 94 1.24E-31 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS00250 dfc13cd6ecb3e3922ed7e437ebd5df51 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 1.9E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00250 dfc13cd6ecb3e3922ed7e437ebd5df51 332 Gene3D G3DSA:1.10.3720.10 97 314 1.3E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00250 dfc13cd6ecb3e3922ed7e437ebd5df51 332 PANTHER PTHR30465:SF43 1 326 1.2E-148 T 22-04-2016 AMK58_RS00250 dfc13cd6ecb3e3922ed7e437ebd5df51 332 SUPERFAMILY SSF161098 100 308 9.37E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00250 dfc13cd6ecb3e3922ed7e437ebd5df51 332 PANTHER PTHR30465 1 326 1.2E-148 T 22-04-2016 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 Gene3D G3DSA:3.40.50.720 1 244 7.8E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 2.6E-96 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PANTHER PTHR24322:SF328 152 184 1.4E-56 T 22-04-2016 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PANTHER PTHR24322:SF328 11 136 1.4E-56 T 22-04-2016 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 4.2E-64 T 22-04-2016 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.3E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.3E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.3E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PANTHER PTHR24322 152 184 1.4E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 PANTHER PTHR24322 11 136 1.4E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 1.1E-5 T 22-04-2016 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS07405 d9a1662d080c3243bcf111b234ee2772 245 SUPERFAMILY SSF51735 6 244 5.45E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 SUPERFAMILY SSF109604 339 488 2.2E-20 T 22-04-2016 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 551 9.1E-213 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 693 5.3E-198 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 Gene3D G3DSA:1.10.730.10 580 686 3.9E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 Gene3D G3DSA:1.10.3210.10 365 465 4.4E-4 T 22-04-2016 IPR006674 HD domain AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 Pfam PF05746 DALR anticodon binding domain 581 686 4.2E-9 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PANTHER PTHR30075 1 694 5.9E-289 T 22-04-2016 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.5E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 316 332 1.5E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.5E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.5E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 392 411 1.5E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 PANTHER PTHR30075:SF2 1 694 5.9E-289 T 22-04-2016 AMK58_RS04090 f4011e590ce84bfea2ebe699abd6fca1 695 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 693 24.74 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS12545 32b17f639e926749a36318fcb2c79de4 163 Pfam PF13467 Ribbon-helix-helix domain 22 97 4.2E-27 T 22-04-2016 IPR027373 Ribbon-helix-helix domain AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 192 342 5.0E-24 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 352 429 2.4E-7 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 Gene3D G3DSA:3.90.1580.10 181 431 2.2E-55 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 PANTHER PTHR23150 1 431 1.1E-87 T 22-04-2016 AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 SUPERFAMILY SSF109854 15 157 5.49E-6 T 22-04-2016 AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 SUPERFAMILY SSF56436 191 431 2.83E-61 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 22 429 2.5E-139 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 PANTHER PTHR23150:SF24 1 431 1.1E-87 T 22-04-2016 AMK58_RS08585 fb731984a992ca06acc4013ea2b9b792 432 Pfam PF12867 DinB superfamily 25 159 6.4E-11 T 22-04-2016 IPR024775 DinB-like domain AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 PANTHER PTHR35004 93 407 2.6E-84 T 22-04-2016 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 Pfam PF13384 Homeodomain-like domain 28 56 3.3E-6 T 22-04-2016 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 SUPERFAMILY SSF53098 134 301 1.21E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 Gene3D G3DSA:3.30.420.10 134 299 9.6E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 SUPERFAMILY SSF46689 28 114 5.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 Pfam PF00665 Integrase core domain 134 262 7.3E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK58_RS13465 dd4d64869a059bc6152dfb66e1ccd9fd 434 PANTHER PTHR35004:SF2 93 407 2.6E-84 T 22-04-2016 AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 Gene3D G3DSA:3.40.50.300 3 207 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 Pfam PF02223 Thymidylate kinase 9 199 7.3E-49 T 22-04-2016 AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 SUPERFAMILY SSF52540 1 206 2.68E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 PANTHER PTHR10344 1 207 1.7E-65 T 22-04-2016 AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.7E-50 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK58_RS07790 f3814a4750aaad0bcac7386cb3b259f7 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 29.552 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK58_RS06030 f4e637185be07157b7340c8fd575ba22 138 SUPERFAMILY SSF55729 15 129 6.56E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06030 f4e637185be07157b7340c8fd575ba22 138 PANTHER PTHR13355:SF5 39 136 4.5E-12 T 22-04-2016 AMK58_RS06030 f4e637185be07157b7340c8fd575ba22 138 PANTHER PTHR13355 39 136 4.5E-12 T 22-04-2016 AMK58_RS06030 f4e637185be07157b7340c8fd575ba22 138 Gene3D G3DSA:3.40.630.30 17 128 5.6E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06030 f4e637185be07157b7340c8fd575ba22 138 Pfam PF13673 Acetyltransferase (GNAT) domain 40 132 1.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS12825 cb4847a820620d638c79afc04eede815 278 SUPERFAMILY SSF56317 1 267 2.75E-77 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS12825 cb4847a820620d638c79afc04eede815 278 PANTHER PTHR23088 5 270 2.8E-96 T 22-04-2016 AMK58_RS12825 cb4847a820620d638c79afc04eede815 278 Gene3D G3DSA:3.60.110.10 3 273 1.3E-80 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS12825 cb4847a820620d638c79afc04eede815 278 Pfam PF00795 Carbon-nitrogen hydrolase 6 260 1.1E-50 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK58_RS12825 cb4847a820620d638c79afc04eede815 278 PANTHER PTHR23088:SF27 5 270 2.8E-96 T 22-04-2016 AMK58_RS02160 6a4d2f117bd27049b551f95f41fa2f8c 327 PANTHER PTHR30349:SF16 1 283 4.6E-55 T 22-04-2016 AMK58_RS02160 6a4d2f117bd27049b551f95f41fa2f8c 327 PANTHER PTHR30349 1 283 4.6E-55 T 22-04-2016 AMK58_RS02160 6a4d2f117bd27049b551f95f41fa2f8c 327 PIRSF PIRSF017082 1 327 4.4E-91 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS02160 6a4d2f117bd27049b551f95f41fa2f8c 327 SUPERFAMILY SSF53850 34 289 7.06E-6 T 22-04-2016 AMK58_RS02160 6a4d2f117bd27049b551f95f41fa2f8c 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 286 4.7E-49 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.0E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 SMART SM00411 1 90 7.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 SUPERFAMILY SSF47729 1 89 7.8E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 PANTHER PTHR33175 1 87 6.2E-41 T 22-04-2016 AMK58_RS06105 ad8212a7b36bc12777f9f291bc645d2a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK58_RS03175 461b61d6e702c821fb398cbfad77b17b 141 Pfam PF13577 SnoaL-like domain 11 129 5.6E-15 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK58_RS03175 461b61d6e702c821fb398cbfad77b17b 141 SUPERFAMILY SSF54427 10 137 2.79E-25 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS03175 461b61d6e702c821fb398cbfad77b17b 141 Gene3D G3DSA:3.10.450.50 11 134 7.5E-22 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS03240 8bc7610994cf598b3191fbdaac6afd23 656 SUPERFAMILY SSF53300 237 435 3.02E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03240 8bc7610994cf598b3191fbdaac6afd23 656 Gene3D G3DSA:3.40.50.410 237 363 3.0E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03240 8bc7610994cf598b3191fbdaac6afd23 656 Pfam PF00092 von Willebrand factor type A domain 237 393 1.2E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 PANTHER PTHR11822 1 405 0.0 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 SUPERFAMILY SSF53659 1 403 7.1E-158 T 22-04-2016 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 Gene3D G3DSA:3.40.718.10 3 403 1.2E-179 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 8.8E-71 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 404 2.3E-220 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 PIRSF PIRSF000108 1 405 9.5E-229 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK58_RS09940 c327942e5a74ddd8b3ddfe9980edd11b 405 SMART SM01329 9 395 1.1E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PANTHER PTHR22939:SF79 116 414 8.3E-121 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PANTHER PTHR22939:SF79 3 77 8.3E-121 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 56 511 1.0E-151 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 SMART SM00228 423 506 0.024 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 SMART SM00228 307 389 6.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PANTHER PTHR22939 116 414 8.3E-121 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PANTHER PTHR22939 3 77 8.3E-121 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Gene3D G3DSA:2.40.10.10 54 195 4.9E-38 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 SUPERFAMILY SSF50156 265 390 3.5E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 261 278 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 347 359 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 205 229 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 164 184 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 143 155 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 1.19E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Gene3D G3DSA:2.40.10.10 197 309 6.0E-45 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Pfam PF13180 PDZ domain 307 395 6.5E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 SUPERFAMILY SSF50156 425 514 8.81E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Gene3D G3DSA:2.30.42.10 426 515 1.8E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Gene3D G3DSA:2.30.42.10 310 405 1.7E-32 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 Pfam PF13365 Trypsin-like peptidase domain 134 268 2.2E-33 T 22-04-2016 AMK58_RS09755 87452a72cf2c381988455e5632e0bef1 518 SUPERFAMILY SSF50494 53 299 4.8E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 SUPERFAMILY SSF55486 17 586 2.77E-115 T 22-04-2016 AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 Pfam PF08439 Oligopeptidase F 123 192 1.4E-20 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 Gene3D G3DSA:3.40.390.10 352 429 1.6E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 20 599 6.1E-198 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 PANTHER PTHR11804 162 598 1.4E-51 T 22-04-2016 AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 Pfam PF01432 Peptidase family M3 345 587 1.4E-33 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK58_RS05295 374bbd607c3e63d5643c359bc8756ebb 601 PANTHER PTHR11804:SF46 162 598 1.4E-51 T 22-04-2016 AMK58_RS03845 61370110751ea928d445792890c52a94 245 Gene3D G3DSA:1.10.287.500 155 197 9.7E-11 T 22-04-2016 AMK58_RS03845 61370110751ea928d445792890c52a94 245 Gene3D G3DSA:1.10.287.500 105 146 9.1E-6 T 22-04-2016 AMK58_RS03845 61370110751ea928d445792890c52a94 245 SUPERFAMILY SSF75708 71 245 1.23E-32 T 22-04-2016 AMK58_RS03845 61370110751ea928d445792890c52a94 245 Pfam PF04344 Chemotaxis phosphatase, CheZ 66 243 5.8E-10 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 Pfam PF00326 Prolyl oligopeptidase family 94 170 7.8E-7 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 SUPERFAMILY SSF53474 206 318 2.61E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 SUPERFAMILY SSF53474 24 170 2.61E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 Gene3D G3DSA:3.40.50.1820 206 318 2.3E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 Gene3D G3DSA:3.40.50.1820 21 170 2.3E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS08715 94d6a4bded3659cae5b969bea8c1aeea 325 PIRSF PIRSF031982 2 323 4.9E-90 T 22-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 Gene3D G3DSA:3.30.565.10 345 466 6.9E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PANTHER PTHR24423:SF534 2 8 5.4E-46 T 22-04-2016 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PANTHER PTHR24423:SF534 180 466 5.4E-46 T 22-04-2016 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 Pfam PF00672 HAMP domain 167 236 1.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 467 1.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PANTHER PTHR24423 2 8 5.4E-46 T 22-04-2016 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PANTHER PTHR24423 180 466 5.4E-46 T 22-04-2016 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 SUPERFAMILY SSF55874 346 468 1.83E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 SUPERFAMILY SSF47384 234 307 2.35E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS11845 9b21ef7fa56869ead12d8ec3b2d56862 489 SMART SM00387 363 469 3.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 Gene3D G3DSA:3.40.1780.10 1 59 5.3E-96 T 22-04-2016 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 Gene3D G3DSA:3.40.1780.10 174 336 5.3E-96 T 22-04-2016 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 PANTHER PTHR30307 2 338 4.2E-158 T 22-04-2016 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 PANTHER PTHR30307:SF0 2 338 4.2E-158 T 22-04-2016 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 335 4.7E-118 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 Pfam PF02547 Queuosine biosynthesis protein 4 336 2.6E-130 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 SUPERFAMILY SSF111337 1 336 7.46E-128 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 45.505 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05270 8366343bc69fb361332267e4aeee6d19 339 Gene3D G3DSA:2.40.10.240 61 130 1.3E-17 T 22-04-2016 AMK58_RS07745 e0d543ead7197345c613161a9824119e 218 Gene3D G3DSA:3.40.50.150 11 216 2.4E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07745 e0d543ead7197345c613161a9824119e 218 SUPERFAMILY SSF53335 2 208 5.88E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07745 e0d543ead7197345c613161a9824119e 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 15 195 2.5E-39 T 22-04-2016 AMK58_RS07745 e0d543ead7197345c613161a9824119e 218 PANTHER PTHR11579:SF0 1 172 7.1E-34 T 22-04-2016 AMK58_RS07745 e0d543ead7197345c613161a9824119e 218 PANTHER PTHR11579 1 172 7.1E-34 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PANTHER PTHR11728 2 334 1.4E-121 T 22-04-2016 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 Gene3D G3DSA:3.40.50.720 8 182 1.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 7 325 36.683 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 SUPERFAMILY SSF48179 182 334 2.72E-50 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 11 28 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 4.6E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 PIRSF PIRSF000114 2 335 1.5E-94 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 162 6.9E-46 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 Gene3D G3DSA:1.10.1040.10 183 329 1.5E-50 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 2.9E-46 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK58_RS02045 bdea22ed94d223bb0f073924ededd6f8 336 SUPERFAMILY SSF51735 6 183 1.97E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 Gene3D G3DSA:1.10.10.60 66 115 4.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 PANTHER PTHR40055 12 283 1.0E-44 T 22-04-2016 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 SMART SM00871 131 283 1.3E-40 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 Pfam PF12833 Helix-turn-helix domain 34 113 4.2E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 SUPERFAMILY SSF46689 12 59 3.94E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 Gene3D G3DSA:3.20.80.10 132 282 2.5E-48 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 SMART SM00342 28 111 2.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 1.1E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 1.1E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 SUPERFAMILY SSF55136 132 282 1.36E-38 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 Pfam PF06445 GyrI-like small molecule binding domain 131 282 8.4E-39 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 SUPERFAMILY SSF46689 64 115 2.42E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 107 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 Gene3D G3DSA:1.10.10.60 11 65 6.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01330 01e6125e7c2ea3b98649ceb4f715a094 283 PANTHER PTHR40055:SF1 12 283 1.0E-44 T 22-04-2016 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 SUPERFAMILY SSF56784 11 212 7.11E-47 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.6E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.6E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.6E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.6E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 1.8E-21 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 142 190 1.7E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 PANTHER PTHR18901 9 213 1.4E-46 T 22-04-2016 AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 Gene3D G3DSA:3.40.50.1000 9 25 9.8E-39 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS11685 facbbdad39ef742755e29ad540633ed4 227 Gene3D G3DSA:3.40.50.1000 96 212 9.8E-39 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 218 233 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 PANTHER PTHR10108 109 293 1.2E-41 T 22-04-2016 AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 Gene3D G3DSA:3.40.50.150 207 288 8.8E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 SUPERFAMILY SSF53335 199 292 5.93E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 Pfam PF01209 ubiE/COQ5 methyltransferase family 202 290 2.0E-24 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK58_RS22345 a9c9a7fc66082ff03081d5297b0a67bc 298 PANTHER PTHR10108:SF24 109 293 1.2E-41 T 22-04-2016 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 22 82 1.1E-14 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 82 4.6E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 24 51 4.6E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 PANTHER PTHR32089:SF52 22 66 1.6E-13 T 22-04-2016 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 SUPERFAMILY SSF58104 18 78 1.26E-19 T 22-04-2016 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 Gene3D G3DSA:1.10.287.950 18 80 8.0E-19 T 22-04-2016 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 PANTHER PTHR32089 22 66 1.6E-13 T 22-04-2016 AMK58_RS09095 01bc5765ff94bae9e9bff4249c8f5f0b 346 Gene3D G3DSA:3.30.450.20 146 246 1.4E-5 T 22-04-2016 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 14 83 4.6E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 174 1.1E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 Gene3D G3DSA:3.10.20.80 10 85 7.2E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 14 175 8.4E-69 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 7 175 30.079 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 Gene3D G3DSA:3.30.110.10 86 174 5.5E-41 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 SUPERFAMILY SSF55200 90 174 3.4E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 SUPERFAMILY SSF54364 11 85 1.44E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 PANTHER PTHR10938 2 175 3.9E-71 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK58_RS03030 dfd5ac251bd34f7c6e5505d6e31af1f6 175 ProSitePatterns PS00938 Initiation factor 3 signature. 65 78 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 PANTHER PTHR30074:SF2 41 348 3.3E-90 T 22-04-2016 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 Pfam PF01292 Prokaryotic cytochrome b561 134 313 4.3E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 Gene3D G3DSA:1.20.950.20 127 336 3.2E-60 T 22-04-2016 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 SUPERFAMILY SSF81342 128 338 3.14E-42 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 132 332 2.0E-47 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AMK58_RS04345 d8e242f59dbd32016ad899c0da47e43d 348 PANTHER PTHR30074 41 348 3.3E-90 T 22-04-2016 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.1E-26 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 Gene3D G3DSA:2.40.50.140 1 66 1.4E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 PIRSF PIRSF002599 1 69 2.3E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 SUPERFAMILY SSF50249 1 67 2.14E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 PANTHER PTHR11544 1 69 4.1E-23 T 22-04-2016 AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site AMK58_RS01105 f054b601d7e0b592d746866f6163d51d 69 SMART SM00357 3 67 1.3E-23 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 Pfam PF00593 TonB dependent receptor 554 789 8.3E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 Gene3D G3DSA:2.40.170.20 263 793 2.4E-102 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 793 2.5E-106 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 Gene3D G3DSA:2.170.130.10 99 260 2.0E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 PANTHER PTHR32552:SF14 138 793 4.2E-215 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 SMART SM00965 47 98 1.4E-10 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 PANTHER PTHR32552 138 793 4.2E-215 T 22-04-2016 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 SUPERFAMILY SSF56935 138 793 3.11E-99 T 22-04-2016 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 SUPERFAMILY SSF56935 99 111 3.11E-99 T 22-04-2016 AMK58_RS03085 9754e52f4e05baaff81d826322c3df7b 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 242 1.7E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMK58_RS08425 860c1b568fd97c64da67cb2fe19c2d2a 583 Gene3D G3DSA:2.40.160.50 212 583 4.0E-30 T 22-04-2016 AMK58_RS08425 860c1b568fd97c64da67cb2fe19c2d2a 583 PANTHER PTHR12815 44 583 1.1E-53 T 22-04-2016 AMK58_RS08425 860c1b568fd97c64da67cb2fe19c2d2a 583 Pfam PF07244 Surface antigen variable number repeat 174 243 9.0E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK58_RS08425 860c1b568fd97c64da67cb2fe19c2d2a 583 PANTHER PTHR12815:SF11 44 583 1.1E-53 T 22-04-2016 AMK58_RS08425 860c1b568fd97c64da67cb2fe19c2d2a 583 Pfam PF01103 Surface antigen 273 583 8.0E-49 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 PANTHER PTHR30128 44 152 1.0E-50 T 22-04-2016 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 PRINTS PR01021 OMPA domain signature 87 102 2.9E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 PRINTS PR01021 OMPA domain signature 57 79 2.9E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 PRINTS PR01021 OMPA domain signature 102 118 2.9E-19 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 SUPERFAMILY SSF103088 45 154 4.05E-37 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 Gene3D G3DSA:3.30.1330.60 45 152 1.1E-36 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 54 156 6.6E-44 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 PANTHER PTHR30128:SF18 44 152 1.0E-50 T 22-04-2016 AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 Pfam PF00691 OmpA family 56 151 6.0E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09260 18bf6f643ee0c3f0996d2b64dabccc69 158 ProSitePatterns PS01068 OmpA-like domain. 89 133 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMK58_RS11565 574c0f93aac82a7a9b43cbc3523a9849 189 SUPERFAMILY SSF56235 1 168 3.61E-15 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 Gene3D G3DSA:3.40.190.10 192 291 5.4E-38 T 22-04-2016 AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 410 4.0E-90 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 Gene3D G3DSA:3.90.76.10 46 191 8.0E-43 T 22-04-2016 AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 PIRSF PIRSF002741 5 502 2.0E-104 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 PANTHER PTHR30290 1 489 3.0E-122 T 22-04-2016 AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 Gene3D G3DSA:3.10.105.10 292 468 1.4E-43 T 22-04-2016 AMK58_RS13350 d9530a46559dc66bad1269e2b6c28bc7 503 SUPERFAMILY SSF53850 31 490 1.68E-128 T 22-04-2016 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 Gene3D G3DSA:1.10.3720.10 12 296 7.9E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 294 2.1E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 PANTHER PTHR30193:SF5 1 54 2.7E-125 T 22-04-2016 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 PANTHER PTHR30193:SF5 71 307 2.7E-125 T 22-04-2016 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 PANTHER PTHR30193 1 54 2.7E-125 T 22-04-2016 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 PANTHER PTHR30193 71 307 2.7E-125 T 22-04-2016 AMK58_RS07845 2ed95c9c0c833b8c7aa05c71493d2ca7 307 SUPERFAMILY SSF161098 13 305 5.76E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08745 3c3913579068e4d1fbac272f2995cc9d 336 PANTHER PTHR33376 9 335 1.1E-150 T 22-04-2016 AMK58_RS08745 3c3913579068e4d1fbac272f2995cc9d 336 PIRSF PIRSF006470 1 332 1.8E-137 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMK58_RS08745 3c3913579068e4d1fbac272f2995cc9d 336 PANTHER PTHR33376:SF7 9 335 1.1E-150 T 22-04-2016 AMK58_RS08745 3c3913579068e4d1fbac272f2995cc9d 336 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 288 2.3E-102 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMK58_RS08745 3c3913579068e4d1fbac272f2995cc9d 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 315 1.5E-108 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 SUPERFAMILY SSF48179 184 331 9.69E-73 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 3.7E-75 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 SUPERFAMILY SSF51735 1 183 1.39E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 Gene3D G3DSA:1.10.1040.10 29 326 5.2E-118 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 8.0E-69 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 PANTHER PTHR21371 1 338 1.0E-196 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.7E-134 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05530 3d43dff65239e50a3bd979a13dce6cab 339 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 329 46.01 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS00945 d7620c6edfd5f5218bdd1f9012ba26d7 269 SUPERFAMILY SSF161098 6 261 7.85E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00945 d7620c6edfd5f5218bdd1f9012ba26d7 269 Gene3D G3DSA:1.10.3720.10 7 264 2.2E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00945 d7620c6edfd5f5218bdd1f9012ba26d7 269 PANTHER PTHR30193 6 269 9.6E-46 T 22-04-2016 AMK58_RS00945 d7620c6edfd5f5218bdd1f9012ba26d7 269 PANTHER PTHR30193:SF20 6 269 9.6E-46 T 22-04-2016 AMK58_RS00945 d7620c6edfd5f5218bdd1f9012ba26d7 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 260 1.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 SUPERFAMILY SSF53850 94 290 2.53E-28 T 22-04-2016 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 Gene3D G3DSA:1.10.10.10 5 83 1.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 Pfam PF03466 LysR substrate binding domain 94 286 1.1E-30 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 PANTHER PTHR30579 1 284 2.9E-82 T 22-04-2016 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 Gene3D G3DSA:3.40.190.10 93 191 7.0E-22 T 22-04-2016 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 PANTHER PTHR30579:SF6 1 284 2.9E-82 T 22-04-2016 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 SUPERFAMILY SSF46785 5 113 1.21E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01290 5261281b0b6490425178f7e6a02f3d52 294 Gene3D G3DSA:3.40.190.10 192 248 2.8E-7 T 22-04-2016 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 PIRSF PIRSF019251 1 476 5.6E-196 T 22-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 Pfam PF12844 Helix-turn-helix domain 10 67 1.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 SMART SM00530 10 65 1.3E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 Gene3D G3DSA:1.10.260.40 5 74 6.5E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 SUPERFAMILY SSF47413 4 70 2.39E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 PANTHER PTHR10245 6 72 3.1E-14 T 22-04-2016 AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 316 472 7.3E-69 T 22-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMK58_RS13270 f3327ea41f4bf69bc86cf75abbd64970 480 Pfam PF06114 Domain of unknown function (DUF955) 193 315 6.3E-18 T 22-04-2016 IPR010359 HTH domain, IrrE-type AMK58_RS13235 83e7cd24cf8515c1161211b2dcab2c7f 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 55 219 2.1E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13235 83e7cd24cf8515c1161211b2dcab2c7f 222 Gene3D G3DSA:1.10.3720.10 40 219 3.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13235 83e7cd24cf8515c1161211b2dcab2c7f 222 SUPERFAMILY SSF161098 38 220 9.29E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 635 648 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.7E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PANTHER PTHR30009:SF0 473 661 8.6E-275 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 645 2.4E-201 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 642 3.5E-123 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PANTHER PTHR30009 1 417 8.6E-275 T 22-04-2016 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PANTHER PTHR30009:SF0 1 417 8.6E-275 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 PANTHER PTHR30009 473 661 8.6E-275 T 22-04-2016 AMK58_RS01420 b1c7957cf1de0bbd420fc004d5c097bb 663 Pfam PF01578 Cytochrome C assembly protein 89 296 1.4E-52 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 Gene3D G3DSA:3.90.226.10 13 212 6.5E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 SUPERFAMILY SSF52096 265 334 2.67E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 SUPERFAMILY SSF52096 15 212 2.67E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 PANTHER PTHR11941:SF53 2 204 2.1E-133 T 22-04-2016 AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 PANTHER PTHR11941:SF53 257 334 2.1E-133 T 22-04-2016 AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 Gene3D G3DSA:3.90.1670.10 213 291 6.5E-4 T 22-04-2016 IPR024064 FdhE-like AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 351 1.6E-130 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 Gene3D G3DSA:1.10.12.10 292 335 1.2E-4 T 22-04-2016 IPR014748 Crontonase, C-terminal AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 PANTHER PTHR11941 2 204 2.1E-133 T 22-04-2016 AMK58_RS07475 291515e249b5b231d2424b5b8ff09753 363 PANTHER PTHR11941 257 334 2.1E-133 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 PANTHER PTHR10093 1 181 8.9E-74 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 237 299 1.0E-28 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 Pfam PF01106 NifU-like domain 235 295 4.0E-21 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 Pfam PF01592 NifU-like N terminal domain 3 124 3.5E-53 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 298 1.6E-154 T 22-04-2016 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 SUPERFAMILY SSF82649 2 131 1.26E-43 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 PANTHER PTHR10093:SF1 1 181 8.9E-74 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 Gene3D G3DSA:3.90.1010.10 3 125 3.6E-44 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 PIRSF PIRSF000375 1 299 1.0E-135 T 22-04-2016 IPR016217 Nitrogen fixation, NifU AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 SUPERFAMILY SSF117916 223 297 1.0E-19 T 22-04-2016 AMK58_RS04590 126081f7db9c9674ea5d5d9ba9ff3404 305 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 184 1.8E-16 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain AMK58_RS00830 c81a01c236de8a3544e26783d17d093b 184 Pfam PF06347 Bacterial SH3 domain 60 115 2.6E-16 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 AMK58_RS00830 c81a01c236de8a3544e26783d17d093b 184 Pfam PF06347 Bacterial SH3 domain 128 176 1.4E-11 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Pfam PF00989 PAS fold 195 293 9.7E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SMART SM00091 195 261 4.4E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Gene3D G3DSA:3.40.50.2300 46 172 3.0E-13 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Pfam PF00072 Response regulator receiver domain 46 154 1.1E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 311 8.8E-19 T 22-04-2016 IPR000014 PAS domain AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Gene3D G3DSA:1.10.287.130 331 377 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Gene3D G3DSA:3.30.450.20 193 330 2.2E-22 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 391 4.7E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SMART SM00388 326 391 2.1E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 PANTHER PTHR24423 22 56 7.2E-73 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 PANTHER PTHR24423 193 446 7.2E-73 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SMART SM00086 266 306 3.4E-5 T 22-04-2016 IPR001610 PAC motif AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SUPERFAMILY SSF52172 43 183 5.83E-13 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 Gene3D G3DSA:3.30.565.10 378 446 3.6E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 PANTHER PTHR24423:SF491 193 446 7.2E-73 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SUPERFAMILY SSF55874 380 446 1.55E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SUPERFAMILY SSF55785 185 304 7.25E-23 T 22-04-2016 IPR000014 PAS domain AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 PANTHER PTHR24423:SF491 22 56 7.2E-73 T 22-04-2016 AMK58_RS23670 bc634223b6ca3254a1616dea2fa1258b 446 SUPERFAMILY SSF47384 312 393 7.06E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Gene3D G3DSA:3.40.50.2300 261 377 3.5E-21 T 22-04-2016 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Gene3D G3DSA:3.30.565.10 88 238 2.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SUPERFAMILY SSF47384 3 83 5.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SUPERFAMILY SSF52172 261 377 1.21E-20 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SMART SM00387 127 238 8.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Gene3D G3DSA:1.10.287.130 10 79 3.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SMART SM00448 258 372 1.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PANTHER PTHR24423:SF439 1 377 1.8E-101 T 22-04-2016 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SUPERFAMILY SSF55874 72 236 1.07E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 SMART SM00388 18 83 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Pfam PF00072 Response regulator receiver domain 261 372 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 128 235 2.9E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 Pfam PF00512 His Kinase A (phospho-acceptor) domain 18 83 5.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 163 177 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 198 216 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 222 235 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 181 191 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS06675 84eb9f9cbfcf438dab0751423ee9a4f2 381 PANTHER PTHR24423 1 377 1.8E-101 T 22-04-2016 AMK58_RS10620 a99a20e251f28f8b423039e73f5af15f 287 PANTHER PTHR12110 4 276 1.1E-103 T 22-04-2016 AMK58_RS10620 a99a20e251f28f8b423039e73f5af15f 287 Gene3D G3DSA:3.20.20.150 11 285 1.2E-49 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS10620 a99a20e251f28f8b423039e73f5af15f 287 Pfam PF01261 Xylose isomerase-like TIM barrel 28 240 3.0E-29 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS10620 a99a20e251f28f8b423039e73f5af15f 287 PANTHER PTHR12110:SF27 4 276 1.1E-103 T 22-04-2016 AMK58_RS10620 a99a20e251f28f8b423039e73f5af15f 287 SUPERFAMILY SSF51658 1 266 3.01E-50 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 Gene3D G3DSA:3.10.580.10 4 128 7.6E-32 T 22-04-2016 AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 PANTHER PTHR11911 4 135 9.6E-32 T 22-04-2016 AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 SUPERFAMILY SSF54631 4 140 4.3E-34 T 22-04-2016 AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 SMART SM00116 80 128 6.7E-6 T 22-04-2016 IPR000644 CBS domain AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 SMART SM00116 14 62 9.2E-9 T 22-04-2016 IPR000644 CBS domain AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 Pfam PF00571 CBS domain 5 62 6.5E-11 T 22-04-2016 IPR000644 CBS domain AMK58_RS05355 d0f206e078b3ae959a6d280b7920b71c 145 Pfam PF00571 CBS domain 73 128 2.8E-12 T 22-04-2016 IPR000644 CBS domain AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 PANTHER PTHR19836 1 101 2.8E-55 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 SUPERFAMILY SSF57716 2 101 1.57E-37 T 22-04-2016 AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.36 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 Gene3D G3DSA:4.10.830.10 42 101 5.8E-31 T 22-04-2016 AMK58_RS10340 b140e35dd620ecf1b24a2c09dd1497c2 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.3E-26 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 273 3.9E-80 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 Gene3D G3DSA:3.40.1160.10 28 296 1.6E-106 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 PRINTS PR00474 Glutamate 5-kinase family signature 198 225 2.1E-8 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 2.1E-8 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 PRINTS PR00474 Glutamate 5-kinase family signature 248 268 2.1E-8 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 SUPERFAMILY SSF53633 7 297 7.46E-97 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 Hamap MF_00082_A Acetylglutamate kinase [argB]. 30 283 29.442 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 Hamap MF_00082_B Acetylglutamate kinase [argB]. 27 298 37.374 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 PANTHER PTHR23342 8 298 3.0E-116 T 22-04-2016 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 PIRSF PIRSF000728 14 298 3.2E-113 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS12470 186640cebc5ae9a163ffe210341bbc5d 299 Pfam PF00696 Amino acid kinase family 30 273 2.7E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 24 308 28.793 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 PANTHER PTHR11048 20 308 1.6E-140 T 22-04-2016 AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 Pfam PF01040 UbiA prenyltransferase family 47 291 1.4E-63 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 87 109 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 PANTHER PTHR11048:SF28 20 308 1.6E-140 T 22-04-2016 AMK58_RS10780 9d8b31a7c4561f1c9881c6936deac832 308 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 30 306 6.9E-114 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 SUPERFAMILY SSF52540 2 221 8.64E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 Pfam PF00005 ABC transporter 17 160 3.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 PANTHER PTHR24220 3 231 9.0E-119 T 22-04-2016 AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 PANTHER PTHR24220:SF404 3 231 9.0E-119 T 22-04-2016 AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 Gene3D G3DSA:3.40.50.300 1 226 8.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 8.0E-104 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AMK58_RS10595 a1badf4d89fd2c475192f0730346ef79 231 SMART SM00382 26 210 4.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 33.612 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 SUPERFAMILY SSF75625 3 247 9.03E-89 T 22-04-2016 IPR029072 YebC-like AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Gene3D G3DSA:3.30.70.980 138 205 3.9E-21 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Gene3D G3DSA:1.10.10.200 1 78 2.0E-33 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 3.9E-94 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Gene3D G3DSA:3.30.1270.10 213 248 1.7E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Gene3D G3DSA:3.30.1270.10 83 137 1.7E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 PANTHER PTHR12532:SF0 1 242 3.3E-102 T 22-04-2016 AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 Pfam PF01709 Transcriptional regulator 5 237 2.4E-88 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK58_RS09305 1d0bba1f259dbaf5116a64b9a8577524 250 PANTHER PTHR12532 1 242 3.3E-102 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 548 580 1.9E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 284 1.2E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 SMART SM00382 34 244 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 SMART SM00382 350 546 7.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Pfam PF00005 ABC transporter 342 496 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Pfam PF00005 ABC transporter 26 194 6.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220 341 454 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220 299 324 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220 7 273 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Gene3D G3DSA:3.40.50.300 4 268 2.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 Gene3D G3DSA:3.40.50.300 308 576 1.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 SUPERFAMILY SSF52540 313 568 3.39E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220:SF586 341 454 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220:SF586 299 324 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 PANTHER PTHR24220:SF586 7 273 2.2E-146 T 22-04-2016 AMK58_RS00240 94dd76e27bec941c5410ccb80b98e4ff 632 SUPERFAMILY SSF52540 5 265 2.41E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SUPERFAMILY SSF55785 857 982 9.77E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Gene3D G3DSA:3.30.450.20 857 982 1.2E-11 T 22-04-2016 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Pfam PF03705 CheR methyltransferase, all-alpha domain 243 291 7.2E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Gene3D G3DSA:3.40.50.180 39 221 2.0E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Pfam PF01739 CheR methyltransferase, SAM binding domain 306 495 3.4E-54 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Gene3D G3DSA:3.30.450.20 740 855 9.2E-10 T 22-04-2016 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SMART SM00138 239 500 1.4E-82 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SUPERFAMILY SSF55785 734 854 1.26E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PANTHER PTHR24422 134 865 4.0E-199 T 22-04-2016 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SUPERFAMILY SSF47757 234 307 1.57E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Pfam PF01339 CheB methylesterase 41 216 1.3E-54 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SUPERFAMILY SSF53335 305 492 2.3E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 SUPERFAMILY SSF52738 37 221 1.83E-56 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Gene3D G3DSA:3.40.50.150 304 499 7.0E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Pfam PF13596 PAS domain 749 854 1.3E-25 T 22-04-2016 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PANTHER PTHR24422:SF6 134 865 4.0E-199 T 22-04-2016 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 261 274 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 298 310 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 374 390 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 459 482 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 440 454 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 PRINTS PR00996 Glutamate methyltransferase family signature 338 358 2.3E-24 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS09710 f79ea6d298e1c6e4d3d289463db69d0d 1015 Gene3D G3DSA:1.10.155.10 239 301 1.5E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS12235 fff7b188d259ef59d66a626cd618bbfe 309 SUPERFAMILY SSF103481 207 307 1.96E-8 T 22-04-2016 AMK58_RS12235 fff7b188d259ef59d66a626cd618bbfe 309 SUPERFAMILY SSF103481 57 155 7.85E-14 T 22-04-2016 AMK58_RS12235 fff7b188d259ef59d66a626cd618bbfe 309 Pfam PF00892 EamA-like transporter family 170 305 2.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS12235 fff7b188d259ef59d66a626cd618bbfe 309 Pfam PF00892 EamA-like transporter family 29 154 3.4E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS12235 fff7b188d259ef59d66a626cd618bbfe 309 PANTHER PTHR12715 24 309 2.9E-38 T 22-04-2016 AMK58_RS04270 d2970a60ff3332879fd078288de736e8 178 TIGRFAM TIGR01841 phasin: phasin family protein 86 169 1.1E-11 T 22-04-2016 IPR010127 Phasin, subfamily 1 AMK58_RS04270 d2970a60ff3332879fd078288de736e8 178 Pfam PF09361 Phasin protein 67 165 6.2E-23 T 22-04-2016 IPR018968 Phasin AMK58_RS08805 8ef37acbe00092d837ec0157951c2212 157 PANTHER PTHR34235 1 157 1.7E-30 T 22-04-2016 AMK58_RS08805 8ef37acbe00092d837ec0157951c2212 157 Pfam PF01724 Domain of unknown function DUF29 7 149 4.4E-38 T 22-04-2016 IPR002636 Protein from unkown function DUF29 AMK58_RS08805 8ef37acbe00092d837ec0157951c2212 157 PANTHER PTHR34235:SF3 1 157 1.7E-30 T 22-04-2016 AMK58_RS09915 5e5e8e6f66a4e58d65718df012408ca0 232 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 10 220 37.774 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK58_RS09915 5e5e8e6f66a4e58d65718df012408ca0 232 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 11 220 1.5E-53 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK58_RS09915 5e5e8e6f66a4e58d65718df012408ca0 232 Pfam PF02666 Phosphatidylserine decarboxylase 45 216 3.2E-29 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK58_RS09915 5e5e8e6f66a4e58d65718df012408ca0 232 PANTHER PTHR35809 1 223 7.5E-70 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00086 256 296 3.4E-5 T 22-04-2016 IPR001610 PAC motif AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF47226 830 843 7.85E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF47226 875 975 7.85E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF01627 Hpt domain 895 972 1.9E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF55785 175 294 2.58E-22 T 22-04-2016 IPR000014 PAS domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PANTHER PTHR24423:SF382 731 889 1.5E-177 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PANTHER PTHR24423:SF382 169 596 1.5E-177 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PANTHER PTHR24423 731 889 1.5E-177 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PANTHER PTHR24423 169 596 1.5E-177 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:3.40.50.2300 36 162 1.1E-12 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF00512 His Kinase A (phospho-acceptor) domain 316 381 1.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:3.30.450.20 183 320 8.6E-22 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00091 185 251 4.4E-8 T 22-04-2016 IPR000014 PAS domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00387 428 552 2.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:1.20.120.160 870 981 5.0E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:1.10.287.130 321 377 3.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF47384 302 383 2.16E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00448 34 157 0.033 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00448 732 847 2.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 550 3.2E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:3.30.565.10 381 554 1.1E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF00072 Response regulator receiver domain 36 144 3.7E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF00072 Response regulator receiver domain 734 847 1.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SMART SM00388 316 381 2.1E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Gene3D G3DSA:3.40.50.2300 726 851 2.2E-35 T 22-04-2016 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF52172 33 172 2.42E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 Pfam PF00989 PAS fold 185 283 3.4E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF52172 731 852 8.68E-33 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 6.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 6.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 549 6.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 6.8E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 SUPERFAMILY SSF55874 370 549 3.14E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02315 b048c11c609f3211793a51d78722b2a8 986 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 301 3.2E-18 T 22-04-2016 IPR000014 PAS domain AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 Gene3D G3DSA:3.40.190.10 24 163 1.1E-43 T 22-04-2016 AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 PANTHER PTHR18966:SF152 13 270 8.1E-44 T 22-04-2016 AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 Gene3D G3DSA:3.40.190.10 164 226 5.6E-18 T 22-04-2016 AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 SMART SM00062 28 273 1.6E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 SUPERFAMILY SSF53850 5 274 1.32E-61 T 22-04-2016 AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 PANTHER PTHR18966 13 270 8.1E-44 T 22-04-2016 AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 271 1.6E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS01520 cb19d7b40248dab02fd1be83b6f00cd4 277 SMART SM00079 28 272 4.9E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 SMART SM00825 Beta-ketoacyl synthase 4 420 4.7E-17 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 1.0E-62 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 SUPERFAMILY SSF53901 221 419 1.55E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 1.5E-191 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 Gene3D G3DSA:3.40.47.10 269 419 1.3E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 PIRSF PIRSF000447 1 420 2.5E-189 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 1.3E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 SUPERFAMILY SSF53901 1 260 6.29E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 PANTHER PTHR11712 1 419 1.7E-221 T 22-04-2016 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 Gene3D G3DSA:3.40.47.10 2 264 7.1E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS07415 c110bad81f9cba896e7436a165a686ec 420 PANTHER PTHR11712:SF273 1 419 1.7E-221 T 22-04-2016 AMK58_RS05785 de0e02d140480b05984d415a16717ce6 163 PANTHER PTHR35813 7 142 7.5E-35 T 22-04-2016 AMK58_RS05785 de0e02d140480b05984d415a16717ce6 163 PANTHER PTHR35813:SF1 7 142 7.5E-35 T 22-04-2016 AMK58_RS05785 de0e02d140480b05984d415a16717ce6 163 Pfam PF04304 Protein of unknown function (DUF454) 20 133 2.2E-36 T 22-04-2016 IPR007401 Protein of unknown function DUF454 AMK58_RS13230 d96298a0bc22825100b3112947424c3c 233 Gene3D G3DSA:1.10.3720.10 14 228 1.5E-4 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13230 d96298a0bc22825100b3112947424c3c 233 SUPERFAMILY SSF161098 41 216 1.57E-5 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13230 d96298a0bc22825100b3112947424c3c 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 231 2.5E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08515 2d7c967bcc4cfc749ea2c2377ad2b2aa 174 SUPERFAMILY SSF52540 5 170 1.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08515 2d7c967bcc4cfc749ea2c2377ad2b2aa 174 Gene3D G3DSA:3.40.50.300 5 170 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08515 2d7c967bcc4cfc749ea2c2377ad2b2aa 174 PANTHER PTHR34848 5 172 2.0E-69 T 22-04-2016 AMK58_RS08515 2d7c967bcc4cfc749ea2c2377ad2b2aa 174 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 167 7.6E-60 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK58_RS08515 2d7c967bcc4cfc749ea2c2377ad2b2aa 174 PIRSF PIRSF006135 4 172 4.4E-54 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK58_RS05420 ad777349a2e7a6036e7e5379ab3ae393 125 Pfam PF04993 TfoX N-terminal domain 14 104 9.4E-29 T 22-04-2016 IPR007076 TfoX, N-terminal AMK58_RS05420 ad777349a2e7a6036e7e5379ab3ae393 125 SUPERFAMILY SSF159894 6 105 3.66E-29 T 22-04-2016 AMK58_RS05420 ad777349a2e7a6036e7e5379ab3ae393 125 Gene3D G3DSA:3.30.1460.30 7 105 8.5E-32 T 22-04-2016 IPR007076 TfoX, N-terminal AMK58_RS25050 551219b133aa5b908716952328f78d58 85 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 83 1.0E-33 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS25050 551219b133aa5b908716952328f78d58 85 PANTHER PTHR33866 1 83 6.4E-29 T 22-04-2016 AMK58_RS25050 551219b133aa5b908716952328f78d58 85 Pfam PF02675 S-adenosylmethionine decarboxylase 4 83 6.8E-30 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS25050 551219b133aa5b908716952328f78d58 85 PANTHER PTHR33866:SF2 1 83 6.4E-29 T 22-04-2016 AMK58_RS25050 551219b133aa5b908716952328f78d58 85 Gene3D G3DSA:3.60.90.10 3 83 1.6E-32 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS25050 551219b133aa5b908716952328f78d58 85 SUPERFAMILY SSF56276 2 83 7.45E-27 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 PRINTS PR00313 NodO calcium binding signature 3374 3383 4.9E-9 T 22-04-2016 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 PRINTS PR00313 NodO calcium binding signature 3347 3355 4.9E-9 T 22-04-2016 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 PRINTS PR00313 NodO calcium binding signature 3290 3301 4.9E-9 T 22-04-2016 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 PRINTS PR00313 NodO calcium binding signature 3365 3373 4.9E-9 T 22-04-2016 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF14252 Domain of unknown function (DUF4347) 26 184 5.4E-44 T 22-04-2016 IPR025592 Domain of unknown function DUF4347 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 SUPERFAMILY SSF51120 3302 3457 1.83E-30 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF13753 Putative flagellar system-associated repeat 1439 1516 1.4E-25 T 22-04-2016 IPR028059 Putative flagellar system-associated repeat AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF13753 Putative flagellar system-associated repeat 1040 1118 1.3E-24 T 22-04-2016 IPR028059 Putative flagellar system-associated repeat AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3364 3381 0.0018 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3223 3237 0.17 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3204 3219 0.039 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3293 3309 0.002 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3310 3326 0.16 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3239 3254 0.0021 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3383 3399 0.17 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3257 3273 8.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3347 3363 0.0033 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3274 3291 0.04 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 SUPERFAMILY SSF51120 3223 3342 2.18E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3379 3397 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3352 3370 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3361 3379 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3307 3325 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3289 3307 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3280 3298 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 PANTHER PTHR38340 3165 3456 4.2E-14 T 22-04-2016 AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 TIGRFAM TIGR02059 swm_rep_I: cyanobacterial long protein repeat 308 389 3.7E-5 T 22-04-2016 IPR011801 Cyanobacterial long protein repeat AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 TIGRFAM TIGR02059 swm_rep_I: cyanobacterial long protein repeat 1047 1120 1.1E-16 T 22-04-2016 IPR011801 Cyanobacterial long protein repeat AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 TIGRFAM TIGR02059 swm_rep_I: cyanobacterial long protein repeat 1445 1518 2.4E-16 T 22-04-2016 IPR011801 Cyanobacterial long protein repeat AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Gene3D G3DSA:2.150.10.10 3179 3274 6.3E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS04985 3e29644758febb34d83d68f223742265 3467 Gene3D G3DSA:2.150.10.10 3275 3459 5.6E-49 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13310 7c76331e2818ddca10323eb4704fb895 68 Pfam PF06945 Protein of unknown function (DUF1289) 16 63 4.7E-21 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 AMK58_RS13310 7c76331e2818ddca10323eb4704fb895 68 PANTHER PTHR35175 13 64 4.9E-15 T 22-04-2016 AMK58_RS13310 7c76331e2818ddca10323eb4704fb895 68 PANTHER PTHR35175:SF2 13 64 4.9E-15 T 22-04-2016 AMK58_RS05640 b442f8f2d07896ea6f829062e5f6da0a 294 PANTHER PTHR11795 2 293 2.8E-68 T 22-04-2016 AMK58_RS05640 b442f8f2d07896ea6f829062e5f6da0a 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 280 1.6E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS05640 b442f8f2d07896ea6f829062e5f6da0a 294 PANTHER PTHR11795:SF371 2 293 2.8E-68 T 22-04-2016 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 Gene3D G3DSA:3.30.1230.10 33 123 4.0E-28 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 SUPERFAMILY SSF64376 34 122 6.8E-24 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 PANTHER PTHR34215:SF1 18 238 2.9E-21 T 22-04-2016 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 PANTHER PTHR34215 18 238 2.9E-21 T 22-04-2016 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 Pfam PF04296 Protein of unknown function (DUF448) 38 114 1.0E-20 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK58_RS00755 dbd6a4a5abf6d4bab9cab771023cfad5 239 SUPERFAMILY SSF55315 119 204 1.2E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:1.10.10.160 140 218 1.4E-21 T 22-04-2016 IPR013986 DExx box DNA helicase domain AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 SUPERFAMILY SSF52540 32 661 3.34E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:1.10.486.10 416 560 3.4E-46 T 22-04-2016 AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 PANTHER PTHR11070 31 664 1.8E-207 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Pfam PF00580 UvrD/REP helicase N-terminal domain 36 299 1.6E-73 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:3.40.50.300 32 136 2.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:3.40.50.300 219 313 2.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:3.40.50.300 314 415 3.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Gene3D G3DSA:3.40.50.300 570 661 3.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 PANTHER PTHR11070:SF7 31 664 1.8E-207 T 22-04-2016 AMK58_RS03805 c9937a64589cf9ce5a3f54ff7fcdae26 779 Pfam PF13361 UvrD-like helicase C-terminal domain 305 635 1.1E-62 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK58_RS13530 15667433f620e3119935b0b9188ef936 154 Gene3D G3DSA:3.40.630.30 53 141 4.2E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS13530 15667433f620e3119935b0b9188ef936 154 SUPERFAMILY SSF55729 54 138 1.9E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07315 cac849f9f6a0b2ca1b410eb5c1e49fd7 229 PANTHER PTHR11079 5 228 1.1E-62 T 22-04-2016 AMK58_RS07315 cac849f9f6a0b2ca1b410eb5c1e49fd7 229 Pfam PF00849 RNA pseudouridylate synthase 18 165 5.7E-37 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS07315 cac849f9f6a0b2ca1b410eb5c1e49fd7 229 SUPERFAMILY SSF55120 3 222 4.96E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS07315 cac849f9f6a0b2ca1b410eb5c1e49fd7 229 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 56 70 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 PANTHER PTHR11735:SF11 1 144 9.2E-31 T 22-04-2016 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 214 2.4E-46 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 Gene3D G3DSA:3.30.420.40 119 192 8.1E-5 T 22-04-2016 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 SUPERFAMILY SSF53067 112 203 1.13E-6 T 22-04-2016 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 Pfam PF00814 Glycoprotease family 32 123 3.7E-20 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 PANTHER PTHR11735 1 144 9.2E-31 T 22-04-2016 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 SUPERFAMILY SSF53067 1 100 2.37E-26 T 22-04-2016 AMK58_RS00670 1362bea34e07a0120dcb22afa0d14890 225 Gene3D G3DSA:3.30.420.40 1 118 1.8E-36 T 22-04-2016 AMK58_RS16805 b6879edde789713c4e6888013682f792 399 PANTHER PTHR32282 8 386 1.2E-97 T 22-04-2016 AMK58_RS16805 b6879edde789713c4e6888013682f792 399 SUPERFAMILY SSF53955 5 210 1.49E-61 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS16805 b6879edde789713c4e6888013682f792 399 PANTHER PTHR32282:SF5 8 386 1.2E-97 T 22-04-2016 AMK58_RS16805 b6879edde789713c4e6888013682f792 399 Pfam PF00912 Transglycosylase 16 189 8.8E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS16805 b6879edde789713c4e6888013682f792 399 Pfam PF00905 Penicillin binding protein transpeptidase domain 287 386 2.8E-13 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS16805 b6879edde789713c4e6888013682f792 399 Gene3D G3DSA:3.40.710.10 192 387 2.1E-43 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS16805 b6879edde789713c4e6888013682f792 399 SUPERFAMILY SSF56601 221 386 2.82E-42 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS16805 b6879edde789713c4e6888013682f792 399 SUPERFAMILY SSF56601 171 193 2.82E-42 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS16805 b6879edde789713c4e6888013682f792 399 Gene3D G3DSA:1.10.3810.10 17 191 5.9E-59 T 22-04-2016 AMK58_RS09825 ad1b406a0acf74309d7cecfd7da0da4f 217 Gene3D G3DSA:1.20.144.10 78 152 1.3E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS09825 ad1b406a0acf74309d7cecfd7da0da4f 217 Pfam PF01569 PAP2 superfamily 78 152 3.8E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS09825 ad1b406a0acf74309d7cecfd7da0da4f 217 SUPERFAMILY SSF48317 6 156 1.96E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 PANTHER PTHR23293:SF6 183 278 5.8E-48 T 22-04-2016 AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 PANTHER PTHR23293:SF6 8 163 5.8E-48 T 22-04-2016 AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 SUPERFAMILY SSF52402 17 215 1.18E-53 T 22-04-2016 AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 39 230 2.4E-34 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 Gene3D G3DSA:3.40.50.620 9 226 7.5E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 PANTHER PTHR23293 183 278 5.8E-48 T 22-04-2016 AMK58_RS08195 66b1666348933f862f60f96ae00e837a 278 PANTHER PTHR23293 8 163 5.8E-48 T 22-04-2016 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 Gene3D G3DSA:3.65.10.10 239 440 1.1E-46 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 ProSitePatterns PS00104 EPSP synthase signature 1. 92 106 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 PANTHER PTHR21090:SF5 14 445 7.7E-152 T 22-04-2016 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 Gene3D G3DSA:3.65.10.10 25 238 6.3E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 441 30.089 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 433 8.3E-104 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 PIRSF PIRSF000505 1 445 4.9E-118 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 SUPERFAMILY SSF55205 12 441 7.36E-122 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 PANTHER PTHR21090 14 445 7.7E-152 T 22-04-2016 AMK58_RS12655 92437a38127fc00aaa8860ce8890fa75 445 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 440 8.8E-119 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS10085 08af48deb5314264c90224a3907b3403 108 Pfam PF01312 FlhB HrpN YscU SpaS Family 16 89 1.7E-17 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10085 08af48deb5314264c90224a3907b3403 108 Gene3D G3DSA:3.40.1690.10 16 92 8.6E-23 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK58_RS10085 08af48deb5314264c90224a3907b3403 108 PANTHER PTHR30531 17 103 1.1E-26 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10085 08af48deb5314264c90224a3907b3403 108 SUPERFAMILY SSF160544 15 93 2.75E-21 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 326 7.3E-145 T 22-04-2016 IPR014317 Transcription activator PspF AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 Pfam PF02954 Bacterial regulatory protein, Fis family 286 325 1.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 SUPERFAMILY SSF46689 221 328 3.36E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 292 309 2.13E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 309 329 2.13E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 SUPERFAMILY SSF52540 8 244 6.01E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 Gene3D G3DSA:3.40.50.300 8 178 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 Gene3D G3DSA:1.10.8.60 179 232 2.0E-20 T 22-04-2016 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 PANTHER PTHR32071 7 329 9.6E-165 T 22-04-2016 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 PANTHER PTHR32071:SF38 7 329 9.6E-165 T 22-04-2016 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 Pfam PF00158 Sigma-54 interaction domain 8 169 2.4E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 221 230 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 Gene3D G3DSA:1.10.10.60 233 327 1.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS13145 b1f43b94e4921c612ccd77c21fcdf8d5 333 SMART SM00382 28 170 6.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 1.3E-84 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 217 5.7E-89 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 PANTHER PTHR11749 2 218 4.4E-125 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 Gene3D G3DSA:3.20.20.70 1 217 2.8E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 SUPERFAMILY SSF51366 2 216 3.9E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS05715 a83ee2b0a91d05f3a2ae46c57e6f8b75 218 PIRSF PIRSF001461 1 218 5.4E-93 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK58_RS11200 f1489f995229eb53ec0515b4e9295f3f 81 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 14.203 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK58_RS11200 f1489f995229eb53ec0515b4e9295f3f 81 Pfam PF00550 Phosphopantetheine attachment site 9 75 6.9E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS11200 f1489f995229eb53ec0515b4e9295f3f 81 Gene3D G3DSA:1.10.1200.10 2 80 5.5E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS11200 f1489f995229eb53ec0515b4e9295f3f 81 SUPERFAMILY SSF47336 2 79 1.44E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS19170 5937317d64723b2821470a8a0b61c300 298 PANTHER PTHR16254:SF6 1 298 1.6E-98 T 22-04-2016 AMK58_RS19170 5937317d64723b2821470a8a0b61c300 298 SUPERFAMILY SSF51735 257 297 1.3E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS19170 5937317d64723b2821470a8a0b61c300 298 Pfam PF00999 Sodium/hydrogen exchanger family 2 228 1.5E-28 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK58_RS19170 5937317d64723b2821470a8a0b61c300 298 Gene3D G3DSA:3.40.50.720 255 297 3.8E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS19170 5937317d64723b2821470a8a0b61c300 298 PANTHER PTHR16254 1 298 1.6E-98 T 22-04-2016 AMK58_RS00015 1691b545bb0228b35f76fa25a28e4fce 277 Pfam PF13369 Transglutaminase-like superfamily 43 195 3.9E-31 T 22-04-2016 IPR032698 Protein SirB1, N-terminal AMK58_RS09325 7b8773601b199115ba823f0ea5dfec0f 104 Pfam PF05164 Cell division protein ZapA 4 100 3.0E-17 T 22-04-2016 IPR007838 Cell division protein ZapA-like AMK58_RS09325 7b8773601b199115ba823f0ea5dfec0f 104 SUPERFAMILY SSF102829 3 65 3.4E-15 T 22-04-2016 IPR007838 Cell division protein ZapA-like AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 Gene3D G3DSA:3.40.50.720 1 193 4.6E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 PANTHER PTHR21708:SF29 137 320 1.9E-159 T 22-04-2016 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 PANTHER PTHR21708:SF29 1 121 1.9E-159 T 22-04-2016 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 104 7.9E-24 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 SUPERFAMILY SSF51735 1 184 3.94E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 Gene3D G3DSA:1.10.1040.10 197 317 1.1E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 PANTHER PTHR21708 137 320 1.9E-159 T 22-04-2016 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 PANTHER PTHR21708 1 121 1.9E-159 T 22-04-2016 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 SUPERFAMILY SSF48179 197 316 5.95E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS06885 aa9c0b916763dc48acbc3bd27a9b4ae7 341 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 197 316 6.7E-28 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 Pfam PF00672 HAMP domain 196 262 1.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 SMART SM00304 213 266 2.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PANTHER PTHR32089:SF56 281 560 1.6E-151 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PANTHER PTHR32089:SF56 122 248 1.6E-151 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 382 554 1.3E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 Gene3D G3DSA:1.10.287.950 318 525 1.3E-46 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 SMART SM00283 303 550 5.8E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 Pfam PF17200 Single Cache domain 2 40 189 3.2E-33 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 SMART SM01049 35 129 3.3E-20 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 SUPERFAMILY SSF58104 309 556 1.01E-61 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 SUPERFAMILY SSF58104 234 268 1.01E-61 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PANTHER PTHR32089 281 560 1.6E-151 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PANTHER PTHR32089 122 248 1.6E-151 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 Gene3D G3DSA:3.30.450.20 32 182 7.4E-31 T 22-04-2016 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 2.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 2.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 2.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS13805 0aff276b1c5394443c455c43aaff73e0 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 2.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS16075 82f267f37ac8954d0f252c48def5e856 55 SUPERFAMILY SSF55785 1 48 4.76E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS16075 82f267f37ac8954d0f252c48def5e856 55 Gene3D G3DSA:3.30.450.20 2 40 6.1E-7 T 22-04-2016 AMK58_RS16075 82f267f37ac8954d0f252c48def5e856 55 Pfam PF08447 PAS fold 2 52 5.4E-8 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS12950 21f327fed7e6b5f2f7a49e642a4aece2 214 PIRSF PIRSF029287 2 207 7.7E-44 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 AMK58_RS12950 21f327fed7e6b5f2f7a49e642a4aece2 214 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 8 140 4.3E-39 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 AMK58_RS12950 21f327fed7e6b5f2f7a49e642a4aece2 214 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 8 140 3.1E-42 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 AMK58_RS12950 21f327fed7e6b5f2f7a49e642a4aece2 214 Gene3D G3DSA:3.40.1730.10 6 210 8.6E-52 T 22-04-2016 AMK58_RS15320 f61d5d76c62bdaa93a812b38712b2c8e 235 Gene3D G3DSA:3.40.1190.10 1 107 1.8E-19 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS15320 f61d5d76c62bdaa93a812b38712b2c8e 235 SUPERFAMILY SSF53623 1 106 5.49E-16 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS15320 f61d5d76c62bdaa93a812b38712b2c8e 235 Gene3D G3DSA:3.90.190.20 108 229 2.4E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS15320 f61d5d76c62bdaa93a812b38712b2c8e 235 PANTHER PTHR11136 1 184 1.1E-33 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK58_RS15320 f61d5d76c62bdaa93a812b38712b2c8e 235 SUPERFAMILY SSF53244 106 218 1.53E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS01220 f36167a6a1c3149eaa1058fa4609589b 166 SUPERFAMILY SSF141259 3 72 1.01E-15 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS01220 f36167a6a1c3149eaa1058fa4609589b 166 Pfam PF02559 CarD-like/TRCF domain 7 114 7.1E-17 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS01220 f36167a6a1c3149eaa1058fa4609589b 166 SMART SM01058 6 116 5.9E-34 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK58_RS01220 f36167a6a1c3149eaa1058fa4609589b 166 PANTHER PTHR38447 7 162 3.0E-45 T 22-04-2016 AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 Pfam PF13458 Periplasmic binding protein 23 360 1.3E-76 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 SUPERFAMILY SSF53822 23 386 5.76E-88 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 PANTHER PTHR30483:SF13 1 376 2.1E-117 T 22-04-2016 AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 Gene3D G3DSA:3.40.50.2300 147 294 2.2E-27 T 22-04-2016 AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 PANTHER PTHR30483 1 376 2.1E-117 T 22-04-2016 AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 Gene3D G3DSA:3.40.50.2300 19 146 1.5E-42 T 22-04-2016 AMK58_RS11615 3ee11bb7a593dc7f3ae137a28856328d 388 Gene3D G3DSA:3.40.50.2300 295 348 1.5E-42 T 22-04-2016 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 SUPERFAMILY SSF53790 1 215 2.36E-75 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 217 34.472 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 Gene3D G3DSA:3.30.950.10 107 217 3.9E-38 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 Gene3D G3DSA:3.40.1010.10 2 106 6.1E-12 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 265 5.4E-71 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 PIRSF PIRSF005917 1 270 6.2E-95 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 198 5.1E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 PANTHER PTHR21091:SF18 1 215 7.0E-77 T 22-04-2016 AMK58_RS13840 98952f7538b7c780f4b846baf7d81433 273 PANTHER PTHR21091 1 215 7.0E-77 T 22-04-2016 AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 PANTHER PTHR11670 1 199 2.7E-105 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 Gene3D G3DSA:3.20.19.10 1 193 1.0E-49 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 Pfam PF00694 Aconitase C-terminal domain 1 123 2.0E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 SUPERFAMILY SSF52016 1 191 5.3E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 42.089 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 PANTHER PTHR11670:SF12 1 199 2.7E-105 T 22-04-2016 AMK58_RS02500 00f196c7f0ab0b75e64a9ae13d728303 203 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 184 3.2E-79 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK58_RS09400 fce58c842501879c4bb50e63811c1acf 257 SUPERFAMILY SSF103088 151 241 8.89E-12 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09400 fce58c842501879c4bb50e63811c1acf 257 Gene3D G3DSA:3.30.1330.60 158 241 9.9E-13 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS09400 fce58c842501879c4bb50e63811c1acf 257 Pfam PF00691 OmpA family 162 240 6.6E-9 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SUPERFAMILY SSF55874 157 324 3.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Gene3D G3DSA:1.10.287.130 94 163 2.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SMART SM00388 101 167 1.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SUPERFAMILY SSF47384 86 167 5.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PANTHER PTHR24423:SF439 80 467 4.0E-95 T 22-04-2016 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Gene3D G3DSA:3.40.50.2300 354 475 1.2E-22 T 22-04-2016 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 249 263 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 277 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 302 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 321 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SUPERFAMILY SSF52172 356 475 4.98E-24 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Pfam PF00072 Response regulator receiver domain 361 470 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 212 322 6.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SMART SM00387 211 324 2.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 101 167 1.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 Gene3D G3DSA:3.30.565.10 171 326 5.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 SMART SM00448 359 471 1.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04990 95eabc83cdb06bb3a40620dcffceb946 477 PANTHER PTHR24423 80 467 4.0E-95 T 22-04-2016 AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 PANTHER PTHR11795 97 533 1.1E-156 T 22-04-2016 AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 PANTHER PTHR11795:SF349 97 533 1.1E-156 T 22-04-2016 AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 240 530 3.4E-128 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 Pfam PF02653 Branched-chain amino acid transport system / permease component 244 516 4.7E-53 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 Gene3D G3DSA:1.25.10.10 53 227 5.1E-6 T 22-04-2016 IPR011989 Armadillo-like helical AMK58_RS10610 c0e78477db9295fd4b0cfcbc752b134e 534 SUPERFAMILY SSF48371 129 227 4.6E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK58_RS03555 d94cb507dff1a11b17822c2242eebb7b 131 Pfam PF07883 Cupin domain 42 97 2.0E-11 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS03555 d94cb507dff1a11b17822c2242eebb7b 131 SUPERFAMILY SSF51182 6 130 2.31E-30 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS03555 d94cb507dff1a11b17822c2242eebb7b 131 PANTHER PTHR33570:SF5 1 129 4.7E-56 T 22-04-2016 AMK58_RS03555 d94cb507dff1a11b17822c2242eebb7b 131 Gene3D G3DSA:2.60.120.10 7 130 5.8E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS03555 d94cb507dff1a11b17822c2242eebb7b 131 PANTHER PTHR33570 1 129 4.7E-56 T 22-04-2016 AMK58_RS02265 16d25f05862028388d18719a54dc3aa0 276 Gene3D G3DSA:1.10.3720.10 6 265 2.5E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS02265 16d25f05862028388d18719a54dc3aa0 276 PANTHER PTHR32243 6 274 1.3E-118 T 22-04-2016 AMK58_RS02265 16d25f05862028388d18719a54dc3aa0 276 SUPERFAMILY SSF161098 6 272 1.78E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS02265 16d25f05862028388d18719a54dc3aa0 276 PANTHER PTHR32243:SF31 6 274 1.3E-118 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK58_RS02265 16d25f05862028388d18719a54dc3aa0 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 271 5.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 SMART SM00028 72 105 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 SMART SM00028 106 139 4.2E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 SMART SM00028 38 71 0.81 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 SMART SM00028 174 207 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 SUPERFAMILY SSF48452 11 221 5.24E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 Pfam PF13181 Tetratricopeptide repeat 107 137 0.028 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 PANTHER PTHR23083 174 217 2.4E-24 T 22-04-2016 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 PANTHER PTHR23083 277 329 2.4E-24 T 22-04-2016 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 PANTHER PTHR23083 8 139 2.4E-24 T 22-04-2016 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 Gene3D G3DSA:1.25.40.10 7 221 1.6E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13055 e8305cf79132eb37e155ce8c26e001ce 597 Pfam PF13432 Tetratricopeptide repeat 9 72 1.7E-5 T 22-04-2016 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 1 394 5.6E-183 T 22-04-2016 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 Gene3D G3DSA:1.20.1250.20 196 391 5.5E-17 T 22-04-2016 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 Gene3D G3DSA:1.20.1250.20 7 175 1.2E-22 T 22-04-2016 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 SUPERFAMILY SSF103473 7 389 8.76E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 PANTHER PTHR11360 1 381 8.8E-85 T 22-04-2016 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 Pfam PF07690 Major Facilitator Superfamily 2 251 2.1E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06945 0f9788f3e3f89a13580398f820a667ad 411 PANTHER PTHR11360:SF3 1 381 8.8E-85 T 22-04-2016 AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 Pfam PF03109 ABC1 family 46 164 6.5E-34 T 22-04-2016 IPR004147 UbiB domain AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 SUPERFAMILY SSF56112 127 249 3.9E-30 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 SUPERFAMILY SSF56112 29 92 3.9E-30 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 PANTHER PTHR10566:SF79 1 251 1.1E-104 T 22-04-2016 AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 Gene3D G3DSA:3.90.1200.10 172 249 1.1E-11 T 22-04-2016 AMK58_RS25705 031494198309e980eeaffacf8e7c50eb 251 PANTHER PTHR10566 1 251 1.1E-104 T 22-04-2016 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 SUPERFAMILY SSF51366 8 215 1.73E-55 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 PANTHER PTHR22854 9 215 2.0E-55 T 22-04-2016 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 9 213 6.0E-43 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 7 218 37.925 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 PANTHER PTHR22854:SF6 9 215 2.0E-55 T 22-04-2016 AMK58_RS12605 79bb290c24c7737738c12a69dd3eb5d4 218 Gene3D G3DSA:3.20.20.70 8 215 3.3E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 338 3.8E-99 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 Pfam PF02504 Fatty acid synthesis protein 6 327 2.3E-108 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 SUPERFAMILY SSF53659 5 336 1.36E-103 T 22-04-2016 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 144.47 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 PANTHER PTHR30100 3 343 5.8E-136 T 22-04-2016 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 PIRSF PIRSF002465 3 340 2.6E-121 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 Gene3D G3DSA:3.40.718.10 3 336 1.9E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS08265 2cfc7048a3815e6f38702b49f487019a 350 PANTHER PTHR30100:SF1 3 343 5.8E-136 T 22-04-2016 AMK58_RS12400 e2b3c6f238e1029e3b2fb6944cb2cd75 382 PANTHER PTHR12526 4 346 1.1E-16 T 22-04-2016 AMK58_RS12400 e2b3c6f238e1029e3b2fb6944cb2cd75 382 SUPERFAMILY SSF53756 12 349 1.1E-31 T 22-04-2016 AMK58_RS12400 e2b3c6f238e1029e3b2fb6944cb2cd75 382 Pfam PF13692 Glycosyl transferases group 1 188 321 2.5E-15 T 22-04-2016 AMK58_RS12400 e2b3c6f238e1029e3b2fb6944cb2cd75 382 Gene3D G3DSA:3.40.50.2000 188 332 7.5E-13 T 22-04-2016 AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 Gene3D G3DSA:1.10.530.10 170 292 6.0E-43 T 22-04-2016 AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 SMART SM00671 95 131 1.5E-6 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 SMART SM00671 59 94 2.2E-7 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 PANTHER PTHR21666 158 292 5.9E-38 T 22-04-2016 AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 Gene3D G3DSA:1.25.40.10 44 138 1.3E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 Pfam PF01464 Transglycosylase SLT domain 179 277 1.2E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 Pfam PF08238 Sel1 repeat 95 131 8.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 Pfam PF08238 Sel1 repeat 59 94 9.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 SUPERFAMILY SSF53955 169 294 7.88E-43 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS09580 2390de1948ae49db73033d954ac17410 331 SUPERFAMILY SSF81901 46 134 3.66E-16 T 22-04-2016 AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 SMART SM00382 28 228 1.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 3.9E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 PANTHER PTHR24220:SF358 5 253 2.9E-102 T 22-04-2016 AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 Pfam PF00005 ABC transporter 19 179 1.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 PANTHER PTHR24220 5 253 2.9E-102 T 22-04-2016 AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 Gene3D G3DSA:3.40.50.300 3 249 7.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03205 2144860dc9552ab3121d19ba4d6fb6bf 259 SUPERFAMILY SSF52540 4 251 7.78E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 Pfam PF08298 PrkA AAA domain 23 383 4.9E-176 T 22-04-2016 IPR013153 PrkA AAA domain AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 SMART SM00763 23 384 7.0E-204 T 22-04-2016 IPR013153 PrkA AAA domain AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 Pfam PF06798 PrkA serine protein kinase C-terminal domain 387 640 2.9E-76 T 22-04-2016 IPR010650 PrkA C-terminal domain AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 Gene3D G3DSA:3.40.50.300 79 162 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 Gene3D G3DSA:3.40.50.300 247 333 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 PIRSF PIRSF000549 1 648 2.6E-285 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 SUPERFAMILY SSF52540 79 353 2.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 PANTHER PTHR30267:SF2 4 648 2.9E-270 T 22-04-2016 AMK58_RS03600 c86ce959b804518042474e67d70e4b5a 648 PANTHER PTHR30267 4 648 2.9E-270 T 22-04-2016 AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 PANTHER PTHR22683:SF41 322 836 1.8E-242 T 22-04-2016 AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 SMART SM00382 487 692 9.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 PANTHER PTHR22683 322 836 1.8E-242 T 22-04-2016 AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 Pfam PF09397 Ftsk gamma domain 776 836 8.7E-26 T 22-04-2016 IPR018541 FtsK gamma domain AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 SMART SM00843 774 839 5.5E-36 T 22-04-2016 IPR018541 FtsK gamma domain AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 41 203 3.5E-30 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 SUPERFAMILY SSF46785 774 837 3.99E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 Gene3D G3DSA:3.40.50.300 429 736 8.0E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 SUPERFAMILY SSF52540 431 742 2.34E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13690 00ff323f8e0abb1d42451a091bc5a4c6 841 Pfam PF01580 FtsK/SpoIIIE family 452 671 2.2E-64 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 PANTHER PTHR10314 48 98 1.2E-80 T 22-04-2016 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 PANTHER PTHR10314 122 399 1.2E-80 T 22-04-2016 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 SUPERFAMILY SSF53686 47 367 1.44E-60 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 47 370 1.2E-62 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 45 399 1.6E-94 T 22-04-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 Gene3D G3DSA:3.40.50.1100 128 398 3.6E-36 T 22-04-2016 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 PANTHER PTHR10314:SF127 48 98 1.2E-80 T 22-04-2016 AMK58_RS06585 17cfaf9f1cfdeed29a7416b5d9a7c4ba 410 PANTHER PTHR10314:SF127 122 399 1.2E-80 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 47 503 2.5E-162 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PANTHER PTHR22939:SF79 30 68 7.0E-121 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Gene3D G3DSA:2.30.42.10 290 384 4.2E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Gene3D G3DSA:2.30.42.10 413 506 6.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Gene3D G3DSA:2.40.10.10 46 173 1.6E-36 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SUPERFAMILY SSF50156 413 505 1.97E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Pfam PF13365 Trypsin-like peptidase domain 114 249 7.9E-32 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Pfam PF13180 PDZ domain 288 379 4.7E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PANTHER PTHR22939 96 410 7.0E-121 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 412 483 3.9E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 Gene3D G3DSA:2.40.10.10 177 289 1.3E-47 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PANTHER PTHR22939:SF79 96 410 7.0E-121 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 PANTHER PTHR22939 30 68 7.0E-121 T 22-04-2016 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SUPERFAMILY SSF50494 103 284 5.19E-67 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SUPERFAMILY SSF50494 45 69 5.19E-67 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SUPERFAMILY SSF50156 246 371 2.89E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SMART SM00228 412 497 5.3E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS05495 2108b8048146a9f02694bed8b9e26afb 509 SMART SM00228 288 370 7.4E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 PANTHER PTHR34128 3 148 6.6E-47 T 22-04-2016 AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 31.407 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 SUPERFAMILY SSF82093 29 134 5.36E-37 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 Pfam PF03100 CcmE 3 128 5.5E-43 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 Gene3D G3DSA:2.40.50.140 26 122 1.2E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS01425 a2d078eed126fb0375fc404e4f0e2c81 151 PANTHER PTHR34128:SF1 3 148 6.6E-47 T 22-04-2016 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 PANTHER PTHR33175 1 94 5.2E-43 T 22-04-2016 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.493 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.1E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 SUPERFAMILY SSF47729 1 91 7.51E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 SMART SM00411 1 91 3.1E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.6E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.6E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.6E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 PANTHER PTHR33175:SF5 1 94 5.2E-43 T 22-04-2016 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 Gene3D G3DSA:4.10.520.10 1 92 5.3E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS12635 eac5fff32c403648226caefb44181733 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.1E-45 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 Pfam PF01761 3-dehydroquinate synthase 82 345 2.2E-98 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 15 378 40.138 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 Gene3D G3DSA:3.40.50.1970 17 187 1.1E-62 T 22-04-2016 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 Gene3D G3DSA:1.20.1090.10 188 377 3.2E-63 T 22-04-2016 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 PANTHER PTHR21090 7 382 1.3E-159 T 22-04-2016 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 26 369 4.0E-107 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 PIRSF PIRSF001455 17 381 1.8E-100 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK58_RS12530 a76c75cdfa1603c2f355ef1038ec1ebf 382 SUPERFAMILY SSF56796 20 377 9.42E-107 T 22-04-2016 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 Gene3D G3DSA:1.10.10.10 18 162 3.4E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 SMART SM00347 50 150 8.4E-33 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 SUPERFAMILY SSF46785 23 162 5.94E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 110 126 2.7E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 140 160 2.7E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 106 2.7E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 90 2.7E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 Pfam PF01047 MarR family 58 114 4.6E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS00175 dd7939ae1dc1a50195e914eef05ed8fe 164 PANTHER PTHR33164 2 160 4.7E-35 T 22-04-2016 AMK58_RS09740 a19ba87f13851de563f325764524ab22 360 PANTHER PTHR21716:SF7 36 357 1.4E-72 T 22-04-2016 AMK58_RS09740 a19ba87f13851de563f325764524ab22 360 PANTHER PTHR21716 36 357 1.4E-72 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS09740 a19ba87f13851de563f325764524ab22 360 Pfam PF01594 Domain of unknown function DUF20 42 340 2.7E-46 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Gene3D G3DSA:3.40.630.10 332 389 1.3E-70 T 22-04-2016 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Gene3D G3DSA:3.40.630.10 16 203 1.3E-70 T 22-04-2016 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 13 390 50.331 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Pfam PF01546 Peptidase family M20/M25/M40 78 387 7.9E-48 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Gene3D G3DSA:3.30.70.360 204 301 3.6E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 113 151 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 17 387 2.6E-128 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 SUPERFAMILY SSF53187 308 388 2.8E-63 T 22-04-2016 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 SUPERFAMILY SSF53187 14 194 2.8E-63 T 22-04-2016 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 PANTHER PTHR11014 16 393 5.8E-81 T 22-04-2016 AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 Pfam PF07687 Peptidase dimerisation domain 191 296 2.6E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK58_RS12300 a1b1de56582ce3bf3a9c77fdd6810d62 393 SUPERFAMILY SSF55031 195 301 3.59E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 Gene3D G3DSA:3.40.30.10 574 664 2.9E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 Pfam PF11412 Disulphide bond corrector protein DsbC 51 150 2.7E-17 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 PANTHER PTHR32234:SF3 1 693 3.5E-137 T 22-04-2016 AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 Pfam PF13899 Thioredoxin-like 582 664 3.4E-11 T 22-04-2016 AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 SUPERFAMILY SSF52833 577 685 9.26E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS09470 01ea8718521716de95dcc285991f4f22 694 PANTHER PTHR32234 1 693 3.5E-137 T 22-04-2016 AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 PRINTS PR00332 Histidine triad family signature 10 26 2.212881E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 PRINTS PR00332 Histidine triad family signature 31 49 2.212881E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 PRINTS PR00332 Histidine triad family signature 100 110 2.212881E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 PANTHER PTHR23089 5 116 1.9E-36 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 SUPERFAMILY SSF54197 4 117 1.7E-31 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 Pfam PF01230 HIT domain 16 114 6.2E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 Gene3D G3DSA:3.30.428.10 3 115 4.1E-32 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK58_RS00480 d8d38d9659cef619818507fa754e3995 122 ProSitePatterns PS00892 HIT domain signature. 93 111 - T 22-04-2016 IPR019808 Histidine triad, conserved site AMK58_RS09980 b39ae4c969d4570bb04442cc6870aa67 111 PANTHER PTHR34474 1 111 1.0E-31 T 22-04-2016 AMK58_RS09980 b39ae4c969d4570bb04442cc6870aa67 111 PANTHER PTHR34474:SF2 1 111 1.0E-31 T 22-04-2016 AMK58_RS09980 b39ae4c969d4570bb04442cc6870aa67 111 Gene3D G3DSA:3.30.70.900 1 104 1.1E-35 T 22-04-2016 AMK58_RS09980 b39ae4c969d4570bb04442cc6870aa67 111 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 6.3E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK58_RS09980 b39ae4c969d4570bb04442cc6870aa67 111 SUPERFAMILY SSF54909 1 101 7.16E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS12085 5e3f7e1ebbf762008ffddcadea279f84 321 Gene3D G3DSA:1.10.3720.10 93 308 4.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12085 5e3f7e1ebbf762008ffddcadea279f84 321 PANTHER PTHR30465:SF24 1 316 2.4E-118 T 22-04-2016 AMK58_RS12085 5e3f7e1ebbf762008ffddcadea279f84 321 PANTHER PTHR30465 1 316 2.4E-118 T 22-04-2016 AMK58_RS12085 5e3f7e1ebbf762008ffddcadea279f84 321 SUPERFAMILY SSF161098 93 298 8.24E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12085 5e3f7e1ebbf762008ffddcadea279f84 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 315 6.3E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 Gene3D G3DSA:3.30.450.20 205 345 2.7E-13 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 539 719 8.4E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 SMART SM00283 473 720 4.5E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 Gene3D G3DSA:1.10.287.950 482 689 2.5E-42 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 PANTHER PTHR32089:SF40 444 723 1.8E-197 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 PANTHER PTHR32089:SF40 98 414 1.8E-197 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 Pfam PF02743 Cache domain 48 331 2.6E-22 T 22-04-2016 IPR033479 Double Cache domain 1 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 Pfam PF00672 HAMP domain 361 429 1.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 PANTHER PTHR32089 444 723 1.8E-197 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 PANTHER PTHR32089 98 414 1.8E-197 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 SMART SM00304 380 432 1.1E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 SUPERFAMILY SSF58104 400 434 3.53E-61 T 22-04-2016 AMK58_RS04505 9e793f15ee605fb6f805cc8a9f62ac1e 726 SUPERFAMILY SSF58104 472 719 3.53E-61 T 22-04-2016 AMK58_RS13420 d148605392db6c0be765b234792b604a 115 PANTHER PTHR36455 2 107 5.4E-44 T 22-04-2016 AMK58_RS13420 d148605392db6c0be765b234792b604a 115 PANTHER PTHR36455:SF1 2 107 5.4E-44 T 22-04-2016 AMK58_RS13420 d148605392db6c0be765b234792b604a 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-39 T 22-04-2016 IPR008878 Transposase IS66, Orf2 AMK58_RS05360 e01a3ea0e57d73681dd47547cb7ecadc 312 Gene3D G3DSA:1.20.1510.10 5 217 3.0E-18 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain AMK58_RS05360 e01a3ea0e57d73681dd47547cb7ecadc 312 Pfam PF01545 Cation efflux family 8 220 2.0E-31 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK58_RS05360 e01a3ea0e57d73681dd47547cb7ecadc 312 SUPERFAMILY SSF161111 3 219 1.27E-25 T 22-04-2016 AMK58_RS12965 762ec01c451fe2a68b44177785c95b65 140 SUPERFAMILY SSF52091 8 137 2.94E-14 T 22-04-2016 IPR002645 STAS domain AMK58_RS12965 762ec01c451fe2a68b44177785c95b65 140 Pfam PF01740 STAS domain 13 125 7.8E-8 T 22-04-2016 IPR002645 STAS domain AMK58_RS12965 762ec01c451fe2a68b44177785c95b65 140 Gene3D G3DSA:3.30.750.24 8 138 2.0E-18 T 22-04-2016 IPR002645 STAS domain AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 Gene3D G3DSA:3.90.870.10 7 215 2.8E-96 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 PANTHER PTHR21327 13 370 3.7E-147 T 22-04-2016 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 PIRSF PIRSF001259 8 373 2.9E-125 T 22-04-2016 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 7 209 38.265 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 205 7.2E-72 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 13 204 6.8E-83 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 SUPERFAMILY SSF55821 3 209 3.66E-86 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 PANTHER PTHR21327:SF6 13 370 3.7E-147 T 22-04-2016 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 Pfam PF00925 GTP cyclohydrolase II 216 365 8.1E-35 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS08315 84ca2b920ee8d0182648829942b0edcc 374 SUPERFAMILY SSF142695 211 370 9.02E-42 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS09045 7f394d9febc1cc75794d46a35cc5df3f 162 SUPERFAMILY SSF82153 28 161 1.05E-43 T 22-04-2016 IPR000782 FAS1 domain AMK58_RS09045 7f394d9febc1cc75794d46a35cc5df3f 162 Pfam PF02469 Fasciclin domain 38 161 2.5E-39 T 22-04-2016 IPR000782 FAS1 domain AMK58_RS09045 7f394d9febc1cc75794d46a35cc5df3f 162 PANTHER PTHR10900 28 161 1.4E-56 T 22-04-2016 AMK58_RS09045 7f394d9febc1cc75794d46a35cc5df3f 162 SMART SM00554 62 162 1.4E-36 T 22-04-2016 IPR000782 FAS1 domain AMK58_RS09045 7f394d9febc1cc75794d46a35cc5df3f 162 Gene3D G3DSA:2.30.180.10 28 161 1.4E-44 T 22-04-2016 IPR000782 FAS1 domain AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 PANTHER PTHR10695 1 197 3.3E-52 T 22-04-2016 AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 Gene3D G3DSA:3.40.50.300 1 198 4.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 Pfam PF01121 Dephospho-CoA kinase 3 174 9.1E-39 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 175 1.7E-33 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 25.588 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK58_RS00405 891764cf8d4359f899423c1ccffedb5f 214 SUPERFAMILY SSF52540 2 194 8.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 SMART SM00044 355 569 1.5E-14 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 PANTHER PTHR11920 392 594 2.8E-49 T 22-04-2016 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 PANTHER PTHR11920:SF341 392 594 2.8E-49 T 22-04-2016 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 SUPERFAMILY SSF55073 389 589 5.02E-52 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 SMART SM01080 23 294 1.7E-29 T 22-04-2016 IPR007890 CHASE2 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 Gene3D G3DSA:3.30.70.1230 393 591 2.1E-40 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 396 585 2.3E-28 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS08950 691ba56e5c6ef4363be5a9f14c9c4d9e 603 Pfam PF05226 CHASE2 domain 18 290 9.5E-30 T 22-04-2016 IPR007890 CHASE2 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 SUPERFAMILY SSF69864 182 408 1.31E-93 T 22-04-2016 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 9 408 52.658 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 Gene3D G3DSA:3.40.50.620 10 179 2.9E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 125 136 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 PANTHER PTHR11587 10 411 1.7E-231 T 22-04-2016 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 Pfam PF00764 Arginosuccinate synthase 13 401 7.6E-154 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 15 23 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 SUPERFAMILY SSF52402 10 175 2.43E-47 T 22-04-2016 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 Gene3D G3DSA:3.90.1260.10 185 408 3.0E-97 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 11 401 9.9E-142 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS01375 369ac8c46448aef662c99bc04514c42b 411 PANTHER PTHR11587:SF2 10 411 1.7E-231 T 22-04-2016 AMK58_RS12770 35901bcb83f7f0b8e83920d54852d990 196 Gene3D G3DSA:3.90.79.10 8 179 2.8E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12770 35901bcb83f7f0b8e83920d54852d990 196 Pfam PF00293 NUDIX domain 48 159 8.1E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS12770 35901bcb83f7f0b8e83920d54852d990 196 PANTHER PTHR11839 14 180 1.5E-29 T 22-04-2016 AMK58_RS12770 35901bcb83f7f0b8e83920d54852d990 196 PANTHER PTHR11839:SF9 14 180 1.5E-29 T 22-04-2016 AMK58_RS12770 35901bcb83f7f0b8e83920d54852d990 196 SUPERFAMILY SSF55811 8 180 1.9E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS26925 2c1f774e5c6877da57baeca1a94782a4 441 Gene3D G3DSA:1.10.260.40 14 53 3.0E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02180 ec9796f547acd8fd2e72bf139507d291 188 Gene3D G3DSA:3.90.960.10 13 179 2.4E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS02180 ec9796f547acd8fd2e72bf139507d291 188 SUPERFAMILY SSF55826 17 177 9.03E-45 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS02180 ec9796f547acd8fd2e72bf139507d291 188 PANTHER PTHR31423 12 181 9.2E-53 T 22-04-2016 AMK58_RS02180 ec9796f547acd8fd2e72bf139507d291 188 Pfam PF04073 Aminoacyl-tRNA editing domain 38 163 1.9E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 PANTHER PTHR35008 28 281 3.4E-38 T 22-04-2016 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 PANTHER PTHR35008:SF1 28 281 3.4E-38 T 22-04-2016 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 SUPERFAMILY SSF46626 28 142 1.41E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 Gene3D G3DSA:1.10.760.10 28 135 1.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 Gene3D G3DSA:1.10.760.10 174 279 9.2E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 SUPERFAMILY SSF46626 174 281 3.42E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS11705 24333c72a681c9f441d7db8cb7fc9d62 283 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 132 4.1E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS06650 3af860feafada47094a53d2328696507 282 Pfam PF12697 Alpha/beta hydrolase family 20 245 5.3E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS06650 3af860feafada47094a53d2328696507 282 Gene3D G3DSA:3.40.50.1820 19 259 5.4E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06650 3af860feafada47094a53d2328696507 282 PANTHER PTHR10992 16 260 6.5E-26 T 22-04-2016 AMK58_RS06650 3af860feafada47094a53d2328696507 282 SUPERFAMILY SSF53474 9 261 4.95E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 PANTHER PTHR22769 138 317 8.1E-68 T 22-04-2016 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 SUPERFAMILY SSF55811 131 313 3.25E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 146 179 5.8E-8 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 Gene3D G3DSA:3.90.79.10 142 315 5.6E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 PANTHER PTHR22769:SF7 138 317 8.1E-68 T 22-04-2016 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 81 144 3.4E-11 T 22-04-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMK58_RS11920 8d6a70e3cff45df510be3d890ae0a645 317 Pfam PF00293 NUDIX domain 183 287 4.4E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS11595 18b2a62ec00e1864fc54922b71fd1764 563 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 94 224 1.8E-9 T 22-04-2016 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 PANTHER PTHR26402:SF576 7 227 3.7E-100 T 22-04-2016 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 SUPERFAMILY SSF52172 7 129 3.42E-45 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 SMART SM00862 154 229 1.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 Gene3D G3DSA:1.10.10.10 132 231 9.6E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 SMART SM00448 7 120 2.3E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 PANTHER PTHR26402 7 227 3.7E-100 T 22-04-2016 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 Gene3D G3DSA:3.40.50.2300 7 127 2.0E-45 T 22-04-2016 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 SUPERFAMILY SSF46894 130 229 1.42E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 8 230 4.0E-104 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.0E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS01055 c58cf40a1849284a7a03e2d0cfee3a05 234 Pfam PF00072 Response regulator receiver domain 9 120 5.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 PIRSF PIRSF001549 2 447 4.7E-132 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 PANTHER PTHR11476:SF1 4 449 6.9E-184 T 22-04-2016 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Pfam PF13393 Histidyl-tRNA synthetase 11 337 9.9E-37 T 22-04-2016 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 PANTHER PTHR11476 4 449 6.9E-184 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 8 435 1.2E-120 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Gene3D G3DSA:3.40.50.800 354 446 1.8E-26 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 SUPERFAMILY SSF55681 6 349 1.82E-74 T 22-04-2016 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 SUPERFAMILY SSF52954 354 447 1.13E-21 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 445 27.346 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Pfam PF03129 Anticodon binding domain 357 445 8.3E-14 T 22-04-2016 IPR004154 Anticodon-binding AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Gene3D G3DSA:3.30.930.10 4 203 6.2E-88 T 22-04-2016 AMK58_RS11345 d116fdafe2cbc811945fceb93e24a4c0 449 Gene3D G3DSA:3.30.930.10 255 346 6.2E-88 T 22-04-2016 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 Gene3D G3DSA:1.10.260.40 28 90 7.8E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 SUPERFAMILY SSF47413 20 93 9.21E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 SMART SM00530 31 86 2.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 PANTHER PTHR10245 1 135 5.1E-30 T 22-04-2016 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 PANTHER PTHR10245:SF38 1 135 5.1E-30 T 22-04-2016 AMK58_RS07165 2edebba85f97edd0727c6b3e3f371fcd 155 Pfam PF01381 Helix-turn-helix 32 86 5.1E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13820 5ffa18822333b6f16d321662a920b99c 112 Pfam PF01381 Helix-turn-helix 11 65 2.7E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13820 5ffa18822333b6f16d321662a920b99c 112 Gene3D G3DSA:1.10.260.40 2 72 5.5E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS13820 5ffa18822333b6f16d321662a920b99c 112 PANTHER PTHR10245 7 110 1.4E-12 T 22-04-2016 AMK58_RS13820 5ffa18822333b6f16d321662a920b99c 112 SMART SM00530 10 65 4.9E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS13820 5ffa18822333b6f16d321662a920b99c 112 SUPERFAMILY SSF47413 3 68 4.29E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS06985 779cf182b3a1317bed80d0df5f9d49e4 207 PANTHER PTHR20857 1 193 1.3E-40 T 22-04-2016 AMK58_RS06985 779cf182b3a1317bed80d0df5f9d49e4 207 Gene3D G3DSA:3.20.20.70 2 193 1.4E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS06985 779cf182b3a1317bed80d0df5f9d49e4 207 PANTHER PTHR20857:SF21 1 193 1.3E-40 T 22-04-2016 AMK58_RS06985 779cf182b3a1317bed80d0df5f9d49e4 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 186 1.4E-42 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS06985 779cf182b3a1317bed80d0df5f9d49e4 207 SUPERFAMILY SSF51391 4 194 3.66E-51 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 Gene3D G3DSA:3.50.50.60 14 194 1.9E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 Gene3D G3DSA:3.50.50.60 280 368 1.9E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 306 319 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PANTHER PTHR13789 1 411 9.8E-119 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PANTHER PTHR13789:SF5 1 411 9.8E-119 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 1.3E-21 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 1.3E-21 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 1.3E-21 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 1.3E-21 T 22-04-2016 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 Pfam PF01494 FAD binding domain 14 326 7.1E-33 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 15 402 1.1E-129 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 SUPERFAMILY SSF51905 279 398 5.99E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS13705 cd67d965dee5e23754c1716c69d513b1 416 SUPERFAMILY SSF51905 14 189 5.99E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 2.9E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 SUPERFAMILY SSF140490 327 423 1.44E-36 T 22-04-2016 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 PANTHER PTHR11780 2 421 1.9E-281 T 22-04-2016 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 5.8E-199 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 4.7E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 SUPERFAMILY SSF142019 3 240 2.09E-86 T 22-04-2016 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 SMART SM00928 331 376 5.8E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 Pfam PF10531 SLBB domain 243 292 1.2E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK58_RS06145 2ce8f90fefbcd15d952db66c58cc9964 430 SUPERFAMILY SSF142984 241 326 1.22E-24 T 22-04-2016 AMK58_RS01970 d0c130afedd0b7fe357bd703240b64bb 174 Pfam PF14346 Domain of unknown function (DUF4398) 26 118 1.1E-21 T 22-04-2016 IPR025511 Domain of unknown function DUF4398 AMK58_RS08185 1ad6619dd7dbbbb0fdffbb737c546d97 348 PANTHER PTHR30024 1 283 3.2E-26 T 22-04-2016 AMK58_RS08185 1ad6619dd7dbbbb0fdffbb737c546d97 348 PANTHER PTHR30024:SF1 1 283 3.2E-26 T 22-04-2016 AMK58_RS08185 1ad6619dd7dbbbb0fdffbb737c546d97 348 Pfam PF13379 NMT1-like family 35 278 3.7E-29 T 22-04-2016 AMK58_RS08185 1ad6619dd7dbbbb0fdffbb737c546d97 348 Gene3D G3DSA:3.40.190.10 153 259 3.9E-4 T 22-04-2016 AMK58_RS08185 1ad6619dd7dbbbb0fdffbb737c546d97 348 SUPERFAMILY SSF53850 36 275 3.75E-31 T 22-04-2016 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 SMART SM00244 21 183 5.4E-35 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PANTHER PTHR10264:SF80 3 283 4.8E-84 T 22-04-2016 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 TIGRFAM TIGR01932 hflC: HflC protein 144 282 1.2E-42 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PANTHER PTHR10264 3 283 4.8E-84 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PIRSF PIRSF005651 1 287 2.4E-90 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 Pfam PF01145 SPFH domain / Band 7 family 25 199 4.0E-31 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 SUPERFAMILY SSF117892 53 190 2.09E-28 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PRINTS PR00721 Stomatin signature 178 199 1.194366E-5 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PRINTS PR00721 Stomatin signature 159 177 1.194366E-5 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS05485 04a0c15564ff7672dae2b2897560d061 315 PRINTS PR00721 Stomatin signature 76 97 1.194366E-5 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 24 107 7.0E-14 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 315 30.303 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 SUPERFAMILY SSF56349 126 313 3.24E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 Gene3D G3DSA:1.10.150.130 18 115 9.3E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 PANTHER PTHR30349 17 317 2.2E-78 T 22-04-2016 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 SUPERFAMILY SSF47823 25 112 9.22E-11 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 PANTHER PTHR30349:SF5 17 317 2.2E-78 T 22-04-2016 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 Pfam PF00589 Phage integrase family 136 300 1.2E-35 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS11810 2005a2cf4f93498d5de83f924b37b378 319 Gene3D G3DSA:1.10.443.10 131 308 7.5E-48 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 12 204 24.572 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 179 7.0E-37 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 PANTHER PTHR31760:SF0 1 181 7.7E-40 T 22-04-2016 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 PIRSF PIRSF003078 1 194 2.5E-43 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 SUPERFAMILY SSF53335 7 181 5.18E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 Gene3D G3DSA:3.40.50.150 4 180 1.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 Pfam PF02527 rRNA small subunit methyltransferase G 22 181 8.7E-39 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK58_RS00360 a2c5169f5176151ebddebdce827f113c 204 PANTHER PTHR31760 1 181 7.7E-40 T 22-04-2016 AMK58_RS04735 4cab08a6ae5fc63616e76638ed48f7d3 257 Gene3D G3DSA:1.25.10.10 8 244 1.1E-54 T 22-04-2016 IPR011989 Armadillo-like helical AMK58_RS04735 4cab08a6ae5fc63616e76638ed48f7d3 257 SUPERFAMILY SSF48371 14 237 4.34E-44 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK58_RS04735 4cab08a6ae5fc63616e76638ed48f7d3 257 Pfam PF05484 LRV protein FeS4 cluster 8 59 9.3E-26 T 22-04-2016 IPR008665 LRV FeS4 cluster AMK58_RS04735 4cab08a6ae5fc63616e76638ed48f7d3 257 Pfam PF01816 Leucine rich repeat variant 92 114 1.9E-5 T 22-04-2016 IPR004830 Leucine rich repeat variant AMK58_RS12480 743221f75519687a7b13a1638b601767 327 PANTHER PTHR21535:SF37 13 327 8.6E-80 T 22-04-2016 AMK58_RS12480 743221f75519687a7b13a1638b601767 327 SUPERFAMILY SSF143865 1 260 7.19E-31 T 22-04-2016 AMK58_RS12480 743221f75519687a7b13a1638b601767 327 Pfam PF01544 CorA-like Mg2+ transporter protein 28 323 3.6E-51 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK58_RS12480 743221f75519687a7b13a1638b601767 327 SUPERFAMILY SSF144083 262 324 1.31E-18 T 22-04-2016 AMK58_RS12480 743221f75519687a7b13a1638b601767 327 Gene3D G3DSA:1.20.58.340 251 327 1.8E-25 T 22-04-2016 AMK58_RS12480 743221f75519687a7b13a1638b601767 327 PANTHER PTHR21535 13 327 8.6E-80 T 22-04-2016 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 PANTHER PTHR11918 1 430 1.7E-157 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 Pfam PF01938 TRAM domain 370 430 2.1E-7 T 22-04-2016 IPR002792 TRAM domain AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 PANTHER PTHR11918:SF43 1 430 1.7E-157 T 22-04-2016 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 Pfam PF04055 Radical SAM superfamily 145 317 7.2E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 428 2.2E-135 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 430 2.9E-137 T 22-04-2016 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 431 68.199 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 Gene3D G3DSA:3.80.30.20 138 371 2.3E-72 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 Pfam PF00919 Uncharacterized protein family UPF0004 1 95 3.4E-23 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 SMART SM00729 139 359 3.7E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS00700 8d7267f5810bc3ab55c4cb6d8bd0dc73 449 SUPERFAMILY SSF102114 115 363 3.66E-57 T 22-04-2016 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 PIRSF PIRSF001456 3 357 1.8E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 Pfam PF01264 Chorismate synthase 10 350 5.2E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 ProSitePatterns PS00789 Chorismate synthase signature 3. 324 340 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 Gene3D G3DSA:3.60.150.10 9 354 4.9E-158 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 SUPERFAMILY SSF103263 4 354 5.36E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 PANTHER PTHR21085 2 355 2.5E-204 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 TIGRFAM TIGR00033 aroC: chorismate synthase 10 354 1.9E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS09680 517e4f644c7254ae4cb6d1dc0ab459ef 358 Hamap MF_00300 Chorismate synthase [aroC]. 10 357 37.422 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 Gene3D G3DSA:2.40.50.140 1 74 6.2E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 SUPERFAMILY SSF50249 3 74 1.67E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 5.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 5.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 5.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 8.5E-37 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 1.0E-26 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 Pfam PF00366 Ribosomal protein S17 8 74 3.2E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 PANTHER PTHR10744 1 74 2.3E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10360 107f6bb04eea9f2700258f5f83719cfb 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 77 24.405 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS07510 ef9c1a7109758e62d74791f6c70e983a 225 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 132 219 2.4E-13 T 22-04-2016 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase AMK58_RS06420 44d297556933f40b1e8a6c28bb824e91 68 Gene3D G3DSA:3.30.70.100 4 62 1.1E-19 T 22-04-2016 AMK58_RS06420 44d297556933f40b1e8a6c28bb824e91 68 Pfam PF00403 Heavy-metal-associated domain 4 62 2.2E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK58_RS06420 44d297556933f40b1e8a6c28bb824e91 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMK58_RS06420 44d297556933f40b1e8a6c28bb824e91 68 SUPERFAMILY SSF55008 4 62 1.31E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Gene3D G3DSA:3.30.300.30 447 545 1.8E-33 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Gene3D G3DSA:3.40.50.980 178 203 5.4E-34 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Gene3D G3DSA:3.40.50.980 27 136 5.4E-34 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 SUPERFAMILY SSF56801 18 545 3.27E-141 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Pfam PF00501 AMP-binding enzyme 30 450 1.6E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Gene3D G3DSA:3.40.50.980 204 349 1.2E-27 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 PANTHER PTHR24095:SF169 13 546 9.3E-282 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 1.2E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 Gene3D G3DSA:2.30.38.10 377 443 4.6E-20 T 22-04-2016 AMK58_RS05225 e30325f655fe388fc08a993bde09bd5b 551 PANTHER PTHR24095 13 546 9.3E-282 T 22-04-2016 AMK58_RS21865 496a0760ccaaf91bbd4f6db8a0b6a6a1 94 PANTHER PTHR24220 1 94 5.6E-53 T 22-04-2016 AMK58_RS21865 496a0760ccaaf91bbd4f6db8a0b6a6a1 94 SUPERFAMILY SSF52540 1 93 1.89E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS21865 496a0760ccaaf91bbd4f6db8a0b6a6a1 94 Gene3D G3DSA:3.40.50.300 1 93 4.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS21865 496a0760ccaaf91bbd4f6db8a0b6a6a1 94 PANTHER PTHR24220:SF535 1 94 5.6E-53 T 22-04-2016 AMK58_RS21865 496a0760ccaaf91bbd4f6db8a0b6a6a1 94 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 69 94 4.9E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS08985 3f63da40e8fbb15fd0b993b3f474d13e 160 Pfam PF14347 Domain of unknown function (DUF4399) 69 158 1.5E-37 T 22-04-2016 IPR025512 Domain of unknown function DUF4399 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 Pfam PF00561 alpha/beta hydrolase fold 80 459 2.5E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 SUPERFAMILY SSF53474 74 136 8.7E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 SUPERFAMILY SSF53474 316 460 8.7E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 SUPERFAMILY SSF53474 180 234 8.7E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 Gene3D G3DSA:3.40.50.1820 178 280 3.0E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 Gene3D G3DSA:3.40.50.1820 338 472 3.0E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 Gene3D G3DSA:3.40.50.1820 45 135 3.0E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992:SF874 79 135 1.2E-32 T 22-04-2016 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992 372 477 1.2E-32 T 22-04-2016 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992 177 278 1.2E-32 T 22-04-2016 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992 79 135 1.2E-32 T 22-04-2016 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992:SF874 372 477 1.2E-32 T 22-04-2016 AMK58_RS00155 23a790b518518fa38fa90e30769961e1 496 PANTHER PTHR10992:SF874 177 278 1.2E-32 T 22-04-2016 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 PANTHER PTHR11839 5 199 1.6E-61 T 22-04-2016 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 ProSitePatterns PS00893 Nudix box signature. 88 109 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 PANTHER PTHR11839:SF5 5 199 1.6E-61 T 22-04-2016 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 Pfam PF00293 NUDIX domain 47 170 9.7E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 Gene3D G3DSA:3.90.79.10 5 193 8.8E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 5 188 1.8E-40 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 AMK58_RS07715 5f1fd71b4e08adbc9680d34c16e0c54e 202 SUPERFAMILY SSF55811 4 199 2.84E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 SUPERFAMILY SSF52540 96 378 8.35E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Gene3D G3DSA:2.40.30.20 1 92 1.3E-40 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 PANTHER PTHR15184 1 494 0.0 T 22-04-2016 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 508 2.1E-253 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 2.2E-48 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Gene3D G3DSA:3.40.50.300 94 379 3.3E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 PANTHER PTHR15184:SF3 1 494 0.0 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 SUPERFAMILY SSF47917 380 508 1.67E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Gene3D G3DSA:1.20.150.20 380 508 1.1E-54 T 22-04-2016 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 SUPERFAMILY SSF50615 10 94 6.8E-30 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.3E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 PIRSF PIRSF039088 1 509 3.3E-284 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 3.1E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS11775 245b09416e058c82ca8479212d39e61d 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.647 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PANTHER PTHR32089:SF63 189 361 8.1E-141 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PANTHER PTHR32089:SF63 573 841 8.1E-141 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PANTHER PTHR32089 189 361 8.1E-141 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PANTHER PTHR32089 573 841 8.1E-141 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SMART SM00304 538 590 0.58 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SMART SM00304 326 379 3.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SUPERFAMILY SSF58104 558 840 1.92E-72 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SUPERFAMILY SSF158472 326 373 1.57E-8 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SMART SM00283 591 838 9.4E-96 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SMART SM01358 44 297 4.3E-19 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 652 837 3.2E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 Gene3D G3DSA:3.30.450.20 383 492 2.5E-8 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 SUPERFAMILY SSF55785 391 501 1.92E-5 T 22-04-2016 IPR000014 PAS domain AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 Gene3D G3DSA:1.10.287.950 606 810 2.2E-58 T 22-04-2016 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 689 716 1.7E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 718 747 1.7E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 612 641 1.7E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 766 795 1.7E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 Pfam PF08448 PAS fold 384 493 2.2E-7 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS02395 0707d29f273b81d8c6ea2550c835c3d4 856 Pfam PF00672 HAMP domain 307 372 2.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 PANTHER PTHR24031:SF261 1 369 8.6E-180 T 22-04-2016 AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 PANTHER PTHR24031 1 369 8.6E-180 T 22-04-2016 AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 Pfam PF00271 Helicase conserved C-terminal domain 232 340 5.2E-28 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 Gene3D G3DSA:3.40.50.300 213 370 7.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 Pfam PF00270 DEAD/DEAH box helicase 26 195 2.5E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 Gene3D G3DSA:3.40.50.300 1 212 2.8E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 SMART SM00487 21 223 3.6E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 SUPERFAMILY SSF52540 76 362 8.71E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02295 fe10a9fbf11a984f6797b1d25960c547 478 SMART SM00490 259 340 3.6E-35 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS08655 51cb32d743b869a7bc4e4a2929bd99ed 299 Pfam PF11306 Protein of unknown function (DUF3108) 42 278 4.2E-25 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.7E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.7E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.7E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PRINTS PR00070 Dihydrofolate reductase signature 96 110 4.7E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PANTHER PTHR22778:SF16 1 162 7.9E-37 T 22-04-2016 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PANTHER PTHR22778 1 162 7.9E-37 T 22-04-2016 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 Pfam PF00186 Dihydrofolate reductase 3 160 4.7E-48 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 SUPERFAMILY SSF53597 1 162 7.72E-52 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 PIRSF PIRSF000194 1 164 1.4E-54 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS13810 12a0141be864fb029532e9990f88893c 168 Gene3D G3DSA:3.40.430.10 1 162 4.9E-52 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 SMART SM00382 86 240 4.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 SUPERFAMILY SSF54211 251 265 1.74E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 SUPERFAMILY SSF54211 299 429 1.74E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 Pfam PF13541 Subunit ChlI of Mg-chelatase 336 424 1.8E-7 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 SUPERFAMILY SSF52540 67 288 3.63E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 Gene3D G3DSA:3.40.50.300 66 271 6.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 1.9E-168 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 Gene3D G3DSA:3.30.230.10 281 450 1.1E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PANTHER PTHR32472 2 439 1.2E-185 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 Pfam PF13481 AAA domain 71 218 1.1E-14 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 209 237 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 170 194 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 318 341 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 10 34 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 119 136 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 244 270 4.4E-89 T 22-04-2016 AMK58_RS07335 ef8451e099c7c0e4bed0043ac3652c2b 466 PRINTS PR01874 DNA repair protein radA signature 78 106 4.4E-89 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:2.20.25.90 7 63 4.2E-10 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 SUPERFAMILY SSF53706 7 567 1.31E-141 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:3.40.228.10 135 330 1.7E-57 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:3.40.50.740 373 418 1.3E-4 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 PANTHER PTHR11615:SF127 9 683 3.7E-180 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Pfam PF00384 Molybdopterin oxidoreductase 62 471 7.4E-51 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 SMART SM00926 3 59 7.6E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 PANTHER PTHR11615 9 683 3.7E-180 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:3.90.55.10 419 477 1.3E-7 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Pfam PF01568 Molydopterin dinucleotide binding domain 567 676 2.2E-18 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 58 2.8E-6 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 SUPERFAMILY SSF50692 560 682 1.31E-29 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:3.40.50.740 64 132 5.4E-12 T 22-04-2016 AMK58_RS08775 1b48910b488ecb9fe1b44ad49a13fa81 683 Gene3D G3DSA:2.40.40.20 548 682 1.1E-24 T 22-04-2016 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 484 203.706 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 436 5.0E-59 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 Gene3D G3DSA:3.40.50.880 251 442 1.0E-27 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 230 3.1E-27 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 Gene3D G3DSA:3.40.50.300 1 230 4.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 PANTHER PTHR21343 1 483 1.4E-206 T 22-04-2016 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 SUPERFAMILY SSF52540 1 237 4.87E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 478 1.2E-139 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 PANTHER PTHR21343:SF1 1 483 1.4E-206 T 22-04-2016 AMK58_RS08505 b4bd2de768ffe13e4db78cdcc8d6b5d3 484 SUPERFAMILY SSF52317 253 443 4.27E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 SMART SM00304 110 163 2.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 SUPERFAMILY SSF158472 110 160 2.22E-10 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 Pfam PF00672 HAMP domain 91 158 4.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 PANTHER PTHR32089 77 145 9.4E-42 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 PANTHER PTHR32089 177 279 9.4E-42 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 SUPERFAMILY SSF58104 139 269 3.92E-8 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 Gene3D G3DSA:1.10.287.950 188 269 1.4E-5 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 PANTHER PTHR32089:SF56 77 145 9.4E-42 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 PANTHER PTHR32089:SF56 177 279 9.4E-42 T 22-04-2016 AMK58_RS27505 0be4c2c061a8d635aa9b689980f5dd07 279 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 83 4.1E-14 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 Gene3D G3DSA:3.30.450.20 28 122 2.8E-20 T 22-04-2016 AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 Pfam PF08447 PAS fold 40 122 5.4E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 PANTHER PTHR32089:SF52 19 142 7.4E-19 T 22-04-2016 AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 121 6.2E-12 T 22-04-2016 IPR000014 PAS domain AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 SUPERFAMILY SSF55785 29 124 3.32E-25 T 22-04-2016 IPR000014 PAS domain AMK58_RS04440 82692ed25833c26100b1f1f4c85d9648 182 PANTHER PTHR32089 19 142 7.4E-19 T 22-04-2016 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 Pfam PF00034 Cytochrome c 29 125 2.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 SUPERFAMILY SSF46626 25 125 1.07E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 Gene3D G3DSA:1.10.760.10 25 126 1.2E-39 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PANTHER PTHR11961 1 127 4.5E-42 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PRINTS PR00604 Class IA and IB cytochrome C signature 116 124 1.0E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 1.0E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PRINTS PR00604 Class IA and IB cytochrome C signature 49 64 1.0E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PRINTS PR00604 Class IA and IB cytochrome C signature 80 96 1.0E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS03445 2a09dc8fc31bd263bf0fdcf459f1dad3 127 PRINTS PR00604 Class IA and IB cytochrome C signature 37 44 1.0E-20 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 TIGRFAM TIGR00576 dut: dUTP diphosphatase 17 153 5.0E-55 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 Pfam PF00692 dUTPase 22 152 1.1E-31 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 Gene3D G3DSA:2.70.40.10 18 153 3.8E-56 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 SUPERFAMILY SSF51283 10 152 9.68E-53 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 8 153 35.125 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK58_RS01090 97bbae950a1a3f27c8ef1619f909f05c 164 PANTHER PTHR11241 12 162 1.5E-57 T 22-04-2016 AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 PIRSF PIRSF005624 6 207 6.7E-49 T 22-04-2016 AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 Gene3D G3DSA:3.40.50.300 12 203 6.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 Hamap MF_01389 Urease accessory protein UreG [ureG]. 11 209 47.665 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 SUPERFAMILY SSF52540 4 203 1.43E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 13 204 1.3E-104 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 185 1.9E-37 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS07105 8430c873171dee74d0162e027fc5311d 212 PANTHER PTHR31715 12 205 5.1E-129 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 ProSitePatterns PS00352 'Cold-shock' domain signature. 202 221 - T 22-04-2016 IPR019844 Cold-shock conserved site AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 Pfam PF00313 'Cold-shock' DNA-binding domain 190 252 8.0E-23 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 Pfam PF00313 'Cold-shock' DNA-binding domain 22 80 2.9E-7 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 PANTHER PTHR11544 191 251 1.9E-17 T 22-04-2016 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 SUPERFAMILY SSF50249 188 251 4.93E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 Gene3D G3DSA:2.40.50.140 22 81 1.0E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 Gene3D G3DSA:2.40.50.140 189 252 1.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 SUPERFAMILY SSF50249 19 83 1.76E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 SMART SM00357 190 254 1.7E-21 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 SMART SM00357 22 86 1.3E-6 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 PRINTS PR00050 Cold shock protein signature 191 206 2.5E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 PRINTS PR00050 Cold shock protein signature 212 221 2.5E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS12990 8d9571ea5fe47d0e25fa72cf9501ffd4 254 PRINTS PR00050 Cold shock protein signature 227 245 2.5E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS01115 d6c90312570853a30804b7fe42517dcd 328 SUPERFAMILY SSF81345 8 274 3.27E-25 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK58_RS01115 d6c90312570853a30804b7fe42517dcd 328 PANTHER PTHR30477 4 315 5.3E-68 T 22-04-2016 AMK58_RS01115 d6c90312570853a30804b7fe42517dcd 328 PANTHER PTHR30477:SF8 4 315 5.3E-68 T 22-04-2016 AMK58_RS01115 d6c90312570853a30804b7fe42517dcd 328 Pfam PF00950 ABC 3 transport family 14 136 5.6E-23 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK58_RS01115 d6c90312570853a30804b7fe42517dcd 328 Pfam PF00950 ABC 3 transport family 158 275 2.5E-19 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 Pfam PF00072 Response regulator receiver domain 44 156 3.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 SMART SM00331 203 418 2.1E-24 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 Gene3D G3DSA:3.40.50.2300 41 178 7.5E-34 T 22-04-2016 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 SMART SM00448 42 156 2.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 PANTHER PTHR21021 176 419 9.6E-33 T 22-04-2016 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 230 418 1.3E-37 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 PANTHER PTHR21021:SF19 176 419 9.6E-33 T 22-04-2016 AMK58_RS03650 ef3109aa3ebe6bbbc08a2a006e439601 419 SUPERFAMILY SSF52172 37 178 2.7E-37 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 Pfam PF01322 Cytochrome C' 28 144 2.5E-30 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 SUPERFAMILY SSF47175 27 146 6.18E-29 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 PIRSF PIRSF000027 5 146 1.2E-28 T 22-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 PRINTS PR00608 Class II cytochrome C signature 133 144 1.3E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 PRINTS PR00608 Class II cytochrome C signature 110 133 1.3E-7 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup AMK58_RS03290 2c94246daf12156d2c86700a66745829 146 Gene3D G3DSA:1.20.120.10 26 146 2.4E-31 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Gene3D G3DSA:3.40.50.620 230 340 9.4E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Gene3D G3DSA:3.40.50.620 4 115 9.4E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Gene3D G3DSA:1.10.730.10 342 509 3.4E-53 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 260 275 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.2E-32 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 477 5.1E-158 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Gene3D G3DSA:2.170.220.10 118 229 4.3E-45 T 22-04-2016 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Pfam PF09334 tRNA synthetases class I (M) 7 364 3.2E-111 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 509 48.178 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 SUPERFAMILY SSF47323 353 509 3.36E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 SUPERFAMILY SSF52374 4 350 5.36E-113 T 22-04-2016 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PANTHER PTHR11946:SF1 5 476 1.0E-244 T 22-04-2016 AMK58_RS07800 e620e1d0ca3c018d09a1cb61465a108b 516 PANTHER PTHR11946 5 476 1.0E-244 T 22-04-2016 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 265 1.3E-30 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 SUPERFAMILY SSF51735 22 177 3.86E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 Gene3D G3DSA:3.40.50.720 20 163 4.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 SMART SM00859 23 139 1.4E-35 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 PANTHER PTHR10174:SF2 75 263 1.7E-35 T 22-04-2016 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 249 263 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 PANTHER PTHR10174 75 263 1.7E-35 T 22-04-2016 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 24 137 7.6E-30 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 SUPERFAMILY SSF55347 152 264 6.55E-42 T 22-04-2016 AMK58_RS23970 f6ff28582041c7f472340fc98ab427c3 265 Gene3D G3DSA:3.30.360.10 164 264 3.6E-45 T 22-04-2016 AMK58_RS24980 b102f8ce9fbc58f6232432def1e6f932 131 SUPERFAMILY SSF81891 4 71 7.26E-5 T 22-04-2016 AMK58_RS24980 b102f8ce9fbc58f6232432def1e6f932 131 PANTHER PTHR13734 1 119 5.7E-33 T 22-04-2016 AMK58_RS24980 b102f8ce9fbc58f6232432def1e6f932 131 PANTHER PTHR13734:SF45 1 119 5.7E-33 T 22-04-2016 AMK58_RS24980 b102f8ce9fbc58f6232432def1e6f932 131 Gene3D G3DSA:1.10.3210.10 2 86 1.0E-9 T 22-04-2016 IPR006674 HD domain AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 PIRSF PIRSF000451 1 349 4.9E-109 T 22-04-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 Gene3D G3DSA:3.40.47.10 3 208 1.0E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 Gene3D G3DSA:3.40.47.10 211 344 3.8E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 PANTHER PTHR11877 7 347 2.8E-62 T 22-04-2016 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 76 204 3.6E-18 T 22-04-2016 IPR001099 Chalcone/stilbene synthase, N-terminal AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 SUPERFAMILY SSF53901 3 208 3.09E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 SUPERFAMILY SSF53901 210 347 1.09E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 PANTHER PTHR11877:SF10 7 347 2.8E-62 T 22-04-2016 AMK58_RS08480 ab0641ae9c73ada23e4515cffe4bc36a 349 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 216 324 5.0E-11 T 22-04-2016 IPR012328 Chalcone/stilbene synthase, C-terminal AMK58_RS05415 42d3fc2825d3fd48a6e7d8f4e550da00 235 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 14 193 1.5E-48 T 22-04-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 AMK58_RS05415 42d3fc2825d3fd48a6e7d8f4e550da00 235 SUPERFAMILY SSF48498 85 186 6.67E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS05415 42d3fc2825d3fd48a6e7d8f4e550da00 235 Gene3D G3DSA:1.10.357.10 36 167 4.8E-5 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS05415 42d3fc2825d3fd48a6e7d8f4e550da00 235 PANTHER PTHR21427 6 195 7.6E-34 T 22-04-2016 AMK58_RS05415 42d3fc2825d3fd48a6e7d8f4e550da00 235 Pfam PF08511 COQ9 115 191 4.4E-31 T 22-04-2016 IPR013718 COQ9 UniPathway: UPA00232 AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 SMART SM00052 160 401 4.5E-17 T 22-04-2016 IPR001633 EAL domain AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 Pfam PF00563 EAL domain 166 396 1.6E-47 T 22-04-2016 IPR001633 EAL domain AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 SUPERFAMILY SSF141868 166 400 1.7E-45 T 22-04-2016 IPR001633 EAL domain AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 PANTHER PTHR33121 155 400 1.1E-37 T 22-04-2016 AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 PANTHER PTHR33121:SF10 155 400 1.1E-37 T 22-04-2016 AMK58_RS03020 44891ae82c74c58910f9e9d393a4de8b 403 Gene3D G3DSA:3.20.20.450 166 400 2.7E-42 T 22-04-2016 IPR001633 EAL domain AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 SUPERFAMILY SSF52540 17 251 1.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 SMART SM00382 42 229 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 Gene3D G3DSA:3.40.50.300 16 253 1.1E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 PIRSF PIRSF039085 14 257 1.3E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 Pfam PF00005 ABC transporter 33 181 2.9E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 PANTHER PTHR24220:SF490 19 258 5.4E-178 T 22-04-2016 AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 PANTHER PTHR24220 19 258 5.4E-178 T 22-04-2016 AMK58_RS07675 0c8b2fd2e36a171e5b2589f122e2fb0e 258 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 Gene3D G3DSA:3.40.50.150 335 483 5.6E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 Gene3D G3DSA:3.40.50.150 532 646 5.6E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PANTHER PTHR30195:SF2 505 657 6.4E-29 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PANTHER PTHR30195:SF2 312 477 6.4E-29 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 SUPERFAMILY SSF53335 265 481 1.75E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 SUPERFAMILY SSF53335 546 685 1.75E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PANTHER PTHR30195 505 657 6.4E-29 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PANTHER PTHR30195 312 477 6.4E-29 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 Pfam PF02384 N-6 DNA Methylase 548 643 2.8E-5 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 Pfam PF02384 N-6 DNA Methylase 311 488 3.8E-16 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 467 479 2.3E-17 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 546 570 2.3E-17 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 349 2.3E-17 T 22-04-2016 AMK58_RS01860 b4f62f64b4bcfc087ac78867c455ff6a 688 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 375 389 2.3E-17 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 PANTHER PTHR14226 8 193 2.0E-85 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 PANTHER PTHR14226:SF24 243 345 2.0E-85 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 Gene3D G3DSA:3.40.1090.10 11 173 7.4E-7 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 PANTHER PTHR14226:SF24 8 193 2.0E-85 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 Pfam PF01734 Patatin-like phospholipase 11 168 6.6E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 PANTHER PTHR14226 243 345 2.0E-85 T 22-04-2016 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 SUPERFAMILY SSF52151 248 329 1.49E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK58_RS08705 b061246647d0f110ce33dd877a349400 346 SUPERFAMILY SSF52151 5 183 1.49E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK58_RS00045 b506398f29c31e51c5a1d1cdd0821d8a 184 SUPERFAMILY SSF52091 28 132 1.51E-17 T 22-04-2016 IPR002645 STAS domain AMK58_RS00045 b506398f29c31e51c5a1d1cdd0821d8a 184 Pfam PF13466 STAS domain 39 118 7.1E-13 T 22-04-2016 IPR002645 STAS domain AMK58_RS00045 b506398f29c31e51c5a1d1cdd0821d8a 184 Gene3D G3DSA:3.30.750.24 29 133 1.8E-19 T 22-04-2016 IPR002645 STAS domain AMK58_RS13860 b506398f29c31e51c5a1d1cdd0821d8a 184 SUPERFAMILY SSF52091 28 132 1.51E-17 T 22-04-2016 IPR002645 STAS domain AMK58_RS13860 b506398f29c31e51c5a1d1cdd0821d8a 184 Pfam PF13466 STAS domain 39 118 7.1E-13 T 22-04-2016 IPR002645 STAS domain AMK58_RS13860 b506398f29c31e51c5a1d1cdd0821d8a 184 Gene3D G3DSA:3.30.750.24 29 133 1.8E-19 T 22-04-2016 IPR002645 STAS domain AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 SUPERFAMILY SSF51735 1 122 8.11E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 SMART SM00881 4 100 8.8E-38 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 Gene3D G3DSA:3.40.50.261 120 288 1.0E-73 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.7E-139 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 Pfam PF00549 CoA-ligase 151 265 4.0E-18 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 SUPERFAMILY SSF52210 123 288 6.02E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 Pfam PF02629 CoA binding domain 6 99 2.9E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.4E-37 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 Gene3D G3DSA:3.40.50.720 3 119 4.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PANTHER PTHR11117 1 290 2.7E-199 T 22-04-2016 AMK58_RS02565 c6c2e1733f68b8e8c3dcf5a346d6ad50 291 PIRSF PIRSF001553 1 291 2.0E-132 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 SUPERFAMILY SSF56281 3 449 2.62E-114 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 SMART SM00849 15 245 1.1E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 PANTHER PTHR11203 3 462 3.6E-111 T 22-04-2016 AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 PANTHER PTHR11203:SF11 3 462 3.6E-111 T 22-04-2016 AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 Pfam PF00753 Metallo-beta-lactamase superfamily 13 208 2.5E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 Pfam PF10996 Beta-Casp domain 257 372 2.2E-27 T 22-04-2016 IPR022712 Beta-Casp domain AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 Gene3D G3DSA:3.60.15.10 4 102 1.5E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 Gene3D G3DSA:3.60.15.10 138 269 1.5E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 SMART SM01027 257 374 4.6E-50 T 22-04-2016 IPR022712 Beta-Casp domain AMK58_RS05950 d7114b63c30ea5aa96cc13b73fd2266c 535 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 446 5.0E-12 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMK58_RS11205 35daad50743f38b0aeed810c22244360 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 2.4E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS11205 35daad50743f38b0aeed810c22244360 86 ProSitePatterns PS00012 Phosphopantetheine attachment site. 36 51 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site AMK58_RS11205 35daad50743f38b0aeed810c22244360 86 SUPERFAMILY SSF47336 2 84 1.28E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS11205 35daad50743f38b0aeed810c22244360 86 Gene3D G3DSA:1.10.1200.10 1 85 2.9E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 SUPERFAMILY SSF52540 17 252 6.97E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 Pfam PF00005 ABC transporter 35 182 1.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 Gene3D G3DSA:3.40.50.300 14 238 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 PANTHER PTHR24220 17 247 6.9E-82 T 22-04-2016 AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 SMART SM00382 44 233 1.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11075 00b83e4d6417d926e17ee13bb2c9548c 280 PANTHER PTHR24220:SF589 17 247 6.9E-82 T 22-04-2016 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 Gene3D G3DSA:1.10.10.10 80 135 7.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 Pfam PF00072 Response regulator receiver domain 138 246 3.2E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 SMART SM00448 136 246 1.1E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 PANTHER PTHR26402 136 250 2.2E-18 T 22-04-2016 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 SUPERFAMILY SSF88659 80 134 3.36E-7 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 Gene3D G3DSA:3.40.50.2300 136 249 3.1E-25 T 22-04-2016 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 Pfam PF08281 Sigma-70, region 4 80 115 1.1E-7 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS05705 0e703974eb70ab3c1949d62ceb549d14 259 SUPERFAMILY SSF52172 137 250 2.42E-24 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 Pfam PF13692 Glycosyl transferases group 1 239 385 1.4E-13 T 22-04-2016 AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 PANTHER PTHR12526 82 418 6.1E-32 T 22-04-2016 AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 PANTHER PTHR12526 23 65 6.1E-32 T 22-04-2016 AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 SUPERFAMILY SSF53756 26 417 1.2E-44 T 22-04-2016 AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 Gene3D G3DSA:3.40.50.2000 235 397 3.9E-10 T 22-04-2016 AMK58_RS12390 59ff0c35508912beaea85bd416b88946 423 Pfam PF13579 Glycosyl transferase 4-like domain 39 221 7.4E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 SUPERFAMILY SSF53383 12 350 1.39E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 PANTHER PTHR10289 7 352 6.5E-120 T 22-04-2016 AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 Pfam PF01212 Beta-eliminating lyase 13 304 4.2E-63 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 PANTHER PTHR10289:SF8 7 352 6.5E-120 T 22-04-2016 AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 PIRSF PIRSF038940 11 354 4.8E-152 T 22-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 Gene3D G3DSA:3.40.640.10 7 259 2.3E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS09600 1da6fb4462a56201893c969c68414631 354 Gene3D G3DSA:3.90.1150.10 264 350 3.7E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 Pfam PF07729 FCD domain 102 226 3.0E-21 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 SUPERFAMILY SSF46785 14 80 9.23E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 SMART SM00895 102 227 7.8E-21 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 5.9E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 SUPERFAMILY SSF48008 100 233 1.36E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 PANTHER PTHR11751 95 118 1.1E-26 T 22-04-2016 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 PANTHER PTHR11751 17 78 1.1E-26 T 22-04-2016 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 SMART SM00345 17 76 3.8E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 Gene3D G3DSA:1.20.120.530 100 233 1.0E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS11120 7910d4b2b8bab77bfd6448eda20c9ed4 235 Gene3D G3DSA:1.10.10.10 17 80 8.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 Gene3D G3DSA:4.10.960.10 77 158 9.7E-31 T 22-04-2016 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 PANTHER PTHR11229 1 219 5.1E-120 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 Gene3D G3DSA:2.40.30.10 4 33 3.4E-9 T 22-04-2016 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 Gene3D G3DSA:2.40.30.10 159 212 3.4E-9 T 22-04-2016 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 2.0E-87 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 37.086 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 Pfam PF00297 Ribosomal protein L3 88 183 7.0E-16 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10405 f612f132b0bbd1a4641fd42f4cf0b3de 236 SUPERFAMILY SSF50447 1 213 4.77E-83 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 PANTHER PTHR31223:SF0 2 186 8.9E-93 T 22-04-2016 AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 SUPERFAMILY SSF102405 1 177 2.9E-62 T 22-04-2016 AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 Gene3D G3DSA:3.40.50.450 1 184 1.2E-71 T 22-04-2016 AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 178 9.5E-63 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 PANTHER PTHR31223 2 186 8.9E-93 T 22-04-2016 AMK58_RS02530 0585b4323f4d9bb4e7481f1089584873 192 Pfam PF03641 Possible lysine decarboxylase 45 173 1.6E-41 T 22-04-2016 IPR031100 LOG family AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 845 951 2.75E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 673 712 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 419 458 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 56 95 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 183 222 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 546 585 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 310 349 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF06594 Haemolysin-type calcium binding protein related domain 800 839 8.1E-10 T 22-04-2016 IPR010566 Haemolysin-type calcium binding-related AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 592 712 1.09E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 880 898 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 358 458 1.44E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 592 712 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 846 955 1.1E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 2 95 1.2E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 102 222 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 719 839 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 358 458 2.2E-15 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 229 349 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Gene3D G3DSA:2.150.10.10 465 585 1.0E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 229 349 1.09E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 721 736 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 883 900 0.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 486 500 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 848 863 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 123 137 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 250 264 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 231 246 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 104 119 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 357 373 0.0017 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 867 882 0.017 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 740 754 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 613 627 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 594 609 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 467 482 2.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 465 585 3.27E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 2 95 1.83E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 PRINTS PR00313 NodO calcium binding signature 231 239 2.8E-6 T 22-04-2016 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 PRINTS PR00313 NodO calcium binding signature 101 112 2.8E-6 T 22-04-2016 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 PRINTS PR00313 NodO calcium binding signature 467 475 2.8E-6 T 22-04-2016 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 PRINTS PR00313 NodO calcium binding signature 494 503 2.8E-6 T 22-04-2016 AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 719 839 6.41E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 SUPERFAMILY SSF51120 102 222 1.09E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS13560 a27cc3451d97dd73dda556566f6bee27 973 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 871 889 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 SMART SM00322 59 124 9.8E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 PANTHER PTHR11760:SF19 2 246 2.5E-136 T 22-04-2016 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 Pfam PF07650 KH domain 38 109 1.0E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 PANTHER PTHR11760 2 246 2.5E-136 T 22-04-2016 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.2E-39 T 22-04-2016 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 SUPERFAMILY SSF54821 107 205 5.89E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.6E-93 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 Gene3D G3DSA:3.30.1140.32 107 206 7.2E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 SUPERFAMILY SSF54814 2 105 1.44E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 Gene3D G3DSA:3.30.300.20 17 106 5.5E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS10375 19c086a60f6803c788ac2b887a82de88 258 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.137 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:3.30.70.20 563 603 1.3E-4 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 SUPERFAMILY SSF54862 522 627 8.05E-41 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 SUPERFAMILY SSF54862 264 338 8.05E-41 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 PANTHER PTHR24960:SF43 519 652 8.3E-124 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 PANTHER PTHR24960:SF43 82 352 8.3E-124 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 PANTHER PTHR24960 519 652 8.3E-124 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 PANTHER PTHR24960 82 352 8.3E-124 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:1.10.1060.10 324 352 1.7E-8 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:1.10.1060.10 519 531 1.7E-8 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:1.10.1060.10 409 410 1.7E-8 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Pfam PF12838 4Fe-4S dicluster domain 289 331 6.1E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:3.30.70.20 268 323 2.4E-14 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 Gene3D G3DSA:3.30.70.20 532 562 4.9E-10 T 22-04-2016 AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 558 569 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 317 328 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS03715 5fb957157bb51fa17acce10011eda5d4 689 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 527 538 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 SUPERFAMILY SSF52540 4 215 7.36E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 SMART SM00382 30 198 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 PANTHER PTHR24220:SF466 7 243 6.0E-91 T 22-04-2016 AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 Pfam PF00005 ABC transporter 21 148 1.7E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 Gene3D G3DSA:3.40.50.300 8 217 8.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00585 74f8a27699631fe0bb9bb6e9ad6504a4 253 PANTHER PTHR24220 7 243 6.0E-91 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 312 7.5E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 Gene3D G3DSA:3.30.540.10 1 173 3.4E-63 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 Gene3D G3DSA:3.30.540.10 174 318 8.0E-42 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 PANTHER PTHR30447:SF0 1 321 9.6E-159 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 PANTHER PTHR30447 1 321 9.6E-159 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 320 7.7E-109 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 SUPERFAMILY SSF56655 1 315 1.68E-108 T 22-04-2016 AMK58_RS06785 2a35aa1254fbf6cfab0f22adb1d0bc60 321 PIRSF PIRSF004532 1 321 1.0E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 Gene3D G3DSA:3.20.20.360 70 411 3.6E-122 T 22-04-2016 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 PANTHER PTHR21631 1 533 5.8E-283 T 22-04-2016 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 Gene3D G3DSA:1.20.1220.12 412 523 1.3E-30 T 22-04-2016 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 21 529 4.1E-249 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 ProSitePatterns PS00510 Malate synthase signature. 264 279 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 SUPERFAMILY SSF51645 8 531 2.62E-199 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 PIRSF PIRSF001363 1 531 7.3E-251 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 PANTHER PTHR21631:SF1 1 533 5.8E-283 T 22-04-2016 AMK58_RS12505 7032c62fffcbf8ff9640aa50d1e80fab 534 Pfam PF01274 Malate synthase 10 530 6.8E-209 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 PANTHER PTHR11260:SF144 10 198 2.2E-54 T 22-04-2016 AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 82 4.7E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 Gene3D G3DSA:3.40.30.10 11 96 4.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 SUPERFAMILY SSF52833 4 88 1.85E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 SUPERFAMILY SSF47616 82 208 6.54E-15 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 PANTHER PTHR11260 10 198 2.2E-54 T 22-04-2016 AMK58_RS12010 15a3b7d67d5863eb967ed8773e6a4367 220 Gene3D G3DSA:1.20.1050.10 97 209 3.6E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 Pfam PF01979 Amidohydrolase family 50 380 5.6E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 PANTHER PTHR11113:SF7 3 382 7.2E-132 T 22-04-2016 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 PIRSF PIRSF038994 2 382 9.7E-109 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 SUPERFAMILY SSF51556 54 352 1.31E-96 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 SUPERFAMILY SSF51338 1 53 2.88E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 379 3.0E-98 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 Gene3D G3DSA:2.30.40.10 2 54 3.5E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 Gene3D G3DSA:2.30.40.10 352 367 3.5E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 PANTHER PTHR11113 3 382 7.2E-132 T 22-04-2016 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 Gene3D G3DSA:3.20.20.140 55 351 3.6E-93 T 22-04-2016 AMK58_RS10565 559391e1fc00c403b9740f85a1e5d1e3 383 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 153 167 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 258 118.21 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 Pfam PF03070 TENA/THI-4/PQQC family 12 229 1.3E-49 T 22-04-2016 IPR004305 Thiaminase-2/PQQC AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 SUPERFAMILY SSF48613 2 251 1.8E-63 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 5 249 1.5E-109 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 PANTHER PTHR40279:SF2 4 256 1.8E-126 T 22-04-2016 AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 PANTHER PTHR40279 4 256 1.8E-126 T 22-04-2016 AMK58_RS06480 ee340ce3e8e0d7078da4bdef3b90e4eb 258 Gene3D G3DSA:1.20.910.10 2 250 8.9E-99 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 PANTHER PTHR10799:SF750 238 453 1.2E-26 T 22-04-2016 AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 SUPERFAMILY SSF46458 35 155 1.73E-16 T 22-04-2016 IPR009050 Globin-like AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 SMART SM00267 285 456 3.0E-50 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 Gene3D G3DSA:3.30.70.270 298 455 9.3E-53 T 22-04-2016 AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 452 2.2E-42 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 Pfam PF11563 Protoglobin 20 160 8.4E-12 T 22-04-2016 AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 PANTHER PTHR10799 238 453 1.2E-26 T 22-04-2016 AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 SUPERFAMILY SSF55073 301 455 8.63E-46 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 455 6.7E-47 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS02545 c48538865c2810fb382999b64862c5ff 456 Gene3D G3DSA:1.10.490.10 21 150 5.4E-17 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 SUPERFAMILY SSF51445 170 601 6.98E-142 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08870 d48a183c42099677687d766810b828ca 729 SUPERFAMILY SSF51445 640 726 6.98E-142 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS08870 d48a183c42099677687d766810b828ca 729 PANTHER PTHR32438 3 728 2.4E-143 T 22-04-2016 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 PANTHER PTHR32438:SF5 3 728 2.4E-143 T 22-04-2016 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 Pfam PF02446 4-alpha-glucanotransferase 189 705 1.9E-118 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 137 722 1.4E-134 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 Gene3D G3DSA:3.20.20.80 653 722 8.5E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS08870 d48a183c42099677687d766810b828ca 729 Gene3D G3DSA:3.20.20.80 183 614 8.5E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS03730 a60591865dd874c58839afa88d3aed7b 160 Pfam PF06319 Protein of unknown function (DUF1052) 18 151 1.6E-56 T 22-04-2016 IPR009394 DNA repair protein MmcB-like AMK58_RS03730 a60591865dd874c58839afa88d3aed7b 160 PIRSF PIRSF031796 5 158 2.7E-52 T 22-04-2016 IPR009394 DNA repair protein MmcB-like AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PANTHER PTHR30071 1 220 6.6E-74 T 22-04-2016 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 200 224 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 1.6E-60 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 224 5.1E-85 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK58_RS01435 13262c43f1a715c65a7a826eb9c01a5c 239 Pfam PF01578 Cytochrome C assembly protein 8 180 1.2E-30 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 PANTHER PTHR10799 67 337 1.1E-27 T 22-04-2016 AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 336 5.0E-45 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 338 7.1E-50 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 SUPERFAMILY SSF55073 182 338 2.2E-46 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 Gene3D G3DSA:3.30.70.270 179 339 2.9E-52 T 22-04-2016 AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 PANTHER PTHR10799:SF750 67 337 1.1E-27 T 22-04-2016 AMK58_RS08785 d9de585d19f4da18933748c07654a723 345 SMART SM00267 166 340 4.3E-60 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 22-04-2016 IPR030659 SecY conserved site AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 374 392 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 319 341 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 7.5E-96 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PIRSF PIRSF004557 11 445 3.6E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 Gene3D G3DSA:1.10.3370.10 18 441 2.5E-163 T 22-04-2016 IPR023201 SecY subunit domain AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 437 29.467 T 22-04-2016 IPR026593 Protein translocase subunit SecY AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 22-04-2016 IPR030659 SecY conserved site AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 432 1.1E-127 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 Pfam PF00344 SecY translocase 80 421 1.8E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PANTHER PTHR10906:SF2 22 446 8.9E-207 T 22-04-2016 AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 SUPERFAMILY SSF103491 17 428 2.62E-130 T 22-04-2016 IPR023201 SecY subunit domain AMK58_RS10305 9507fa40090f9b3253dc354404f2165b 446 PANTHER PTHR10906 22 446 8.9E-207 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Gene3D G3DSA:3.40.50.720 166 453 4.9E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Gene3D G3DSA:3.40.50.10380 12 165 7.5E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 PIRSF PIRSF036684 3 755 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 SUPERFAMILY SSF51735 168 457 6.76E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 SMART SM00919 168 405 1.5E-143 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Pfam PF03949 Malic enzyme, NAD binding domain 170 364 1.4E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 PANTHER PTHR23406:SF23 377 461 9.6E-166 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 PANTHER PTHR23406:SF23 36 360 9.6E-166 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 ProSitePatterns PS00331 Malic enzymes signature. 164 180 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 SUPERFAMILY SSF53223 14 166 2.52E-53 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 SMART SM01274 23 156 1.6E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Pfam PF00390 Malic enzyme, N-terminal domain 24 119 4.5E-21 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 PANTHER PTHR23406 377 461 9.6E-166 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 PANTHER PTHR23406 36 360 9.6E-166 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Gene3D G3DSA:3.40.50.10750 578 726 2.8E-47 T 22-04-2016 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 436 750 1.8E-81 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK58_RS01020 f3653604644696bf8b3b4340e248a590 756 SUPERFAMILY SSF53659 435 752 9.46E-85 T 22-04-2016 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 Gene3D G3DSA:3.60.40.10 8 259 7.2E-60 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 SMART SM00331 14 259 1.1E-27 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 PANTHER PTHR13832 12 261 6.2E-50 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 Pfam PF13672 Protein phosphatase 2C 19 221 7.2E-14 T 22-04-2016 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 SMART SM00332 5 257 3.2E-22 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 PANTHER PTHR13832:SF278 12 261 6.2E-50 T 22-04-2016 AMK58_RS07825 74992eb162d109d5e222343e80cf42eb 264 SUPERFAMILY SSF81606 12 259 1.22E-54 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 PANTHER PTHR10362 4 498 3.3E-228 T 22-04-2016 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 505 43.844 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 SUPERFAMILY SSF48557 2 500 6.51E-189 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 501 3.9E-202 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 PANTHER PTHR10362:SF7 4 498 3.3E-228 T 22-04-2016 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 Gene3D G3DSA:1.10.275.10 3 198 1.4E-71 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 140 156 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 Pfam PF00221 Aromatic amino acid lyase 12 471 2.5E-184 T 22-04-2016 IPR001106 Aromatic amino acid lyase AMK58_RS06530 365f3a25b18feea42fe9d88613a935b5 508 Gene3D G3DSA:1.20.200.10 199 500 2.4E-125 T 22-04-2016 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 PANTHER PTHR11142 1 245 3.1E-86 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.496 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 Gene3D G3DSA:3.30.70.580 1 106 4.2E-34 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 239 1.0E-53 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 SUPERFAMILY SSF55120 1 245 7.62E-81 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 Pfam PF01416 tRNA pseudouridine synthase 9 103 6.9E-11 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 2.1E-31 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 Gene3D G3DSA:3.30.70.660 108 242 1.4E-47 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS12200 162d33a4f5a3dd6f221ef5f2da699ca7 245 PIRSF PIRSF001430 1 245 5.8E-67 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 Pfam PF01409 tRNA synthetases class II core domain (F) 90 338 1.2E-103 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 Gene3D G3DSA:3.30.930.10 7 340 8.5E-127 T 22-04-2016 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 338 1.8E-102 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 85 5.9E-23 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 SUPERFAMILY SSF55681 90 340 5.97E-79 T 22-04-2016 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 SUPERFAMILY SSF46589 11 97 2.77E-20 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 6 339 47.111 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 PANTHER PTHR11538 88 337 2.1E-100 T 22-04-2016 AMK58_RS01265 8cc5765a95bb85fff6ba0b9dde285e17 355 PANTHER PTHR11538 41 50 2.1E-100 T 22-04-2016 AMK58_RS11735 c7385e6d902803d10c1f469c0f9f745c 438 PANTHER PTHR21666 38 427 6.4E-24 T 22-04-2016 AMK58_RS11735 c7385e6d902803d10c1f469c0f9f745c 438 SUPERFAMILY SSF51261 263 426 4.81E-27 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK58_RS11735 c7385e6d902803d10c1f469c0f9f745c 438 Pfam PF01551 Peptidase family M23 335 425 2.3E-20 T 22-04-2016 IPR016047 Peptidase M23 AMK58_RS11735 c7385e6d902803d10c1f469c0f9f745c 438 Gene3D G3DSA:2.70.70.10 289 427 3.1E-26 T 22-04-2016 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 PIRSF PIRSF017184 3 485 5.5E-105 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 PANTHER PTHR12592:SF0 1 488 1.8E-108 T 22-04-2016 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Pfam PF01256 Carbohydrate kinase 239 462 9.5E-48 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 215 485 19.311 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 PANTHER PTHR12592 1 488 1.8E-108 T 22-04-2016 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 SUPERFAMILY SSF64153 4 237 2.22E-59 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Pfam PF03853 YjeF-related protein N-terminus 26 179 5.8E-34 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 8 200 1.8E-37 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 200 24.177 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 SUPERFAMILY SSF53613 213 482 6.38E-62 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Gene3D G3DSA:3.40.1190.20 222 483 9.4E-78 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 221 480 4.8E-56 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK58_RS06070 93dfc5a27157fb9d258bdb14ca95abe6 488 Gene3D G3DSA:3.40.50.10260 3 221 9.3E-62 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 SUPERFAMILY SSF53649 30 546 6.11E-152 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342:SF198 291 345 7.2E-149 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342:SF198 1 252 7.2E-149 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342 1 252 7.2E-149 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 22-04-2016 IPR024607 Sulfatase, conserved site AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342 385 565 7.2E-149 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342 291 345 7.2E-149 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 Pfam PF00884 Sulfatase 32 440 1.7E-74 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 Gene3D G3DSA:3.40.720.10 29 468 1.3E-129 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 Gene3D G3DSA:3.30.1120.10 474 547 3.1E-22 T 22-04-2016 AMK58_RS11095 ee1f691ae9ee71c16a561cb28a45d527 570 PANTHER PTHR10342:SF198 385 565 7.2E-149 T 22-04-2016 AMK58_RS02910 0bcc4348a01b387505c41bcd3e192813 430 Gene3D G3DSA:1.10.443.10 121 238 5.2E-7 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS02910 0bcc4348a01b387505c41bcd3e192813 430 SUPERFAMILY SSF56349 124 240 2.0E-8 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS08475 4e6f224996414deb1b4e27ba102f9ffb 179 PANTHER PTHR12714:SF8 8 179 1.8E-43 T 22-04-2016 AMK58_RS08475 4e6f224996414deb1b4e27ba102f9ffb 179 PANTHER PTHR12714 8 179 1.8E-43 T 22-04-2016 AMK58_RS08475 4e6f224996414deb1b4e27ba102f9ffb 179 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 76 165 1.8E-27 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 9.1E-157 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 PANTHER PTHR10160 1 371 1.8E-199 T 22-04-2016 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 8.7E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 PIRSF PIRSF000183 1 371 3.9E-156 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 Gene3D G3DSA:3.40.50.1770 196 362 9.1E-31 T 22-04-2016 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 SMART SM01003 4 137 1.3E-76 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 SUPERFAMILY SSF51735 137 303 4.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 Gene3D G3DSA:3.50.50.60 177 195 1.7E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 Gene3D G3DSA:3.40.50.1770 1 176 4.2E-59 T 22-04-2016 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 SMART SM01002 149 297 3.5E-89 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 SUPERFAMILY SSF52283 305 360 7.23E-66 T 22-04-2016 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 SUPERFAMILY SSF52283 1 137 7.23E-66 T 22-04-2016 AMK58_RS07515 03467a2832711a6e039df3f221be682d 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.8E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS09100 e3607bd0ed84f24518f05c64e81bb0e2 463 SUPERFAMILY SSF58104 12 290 2.88E-50 T 22-04-2016 AMK58_RS09100 e3607bd0ed84f24518f05c64e81bb0e2 463 Gene3D G3DSA:1.10.287.950 43 252 2.4E-42 T 22-04-2016 AMK58_RS09100 e3607bd0ed84f24518f05c64e81bb0e2 463 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 90 286 1.5E-28 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS09100 e3607bd0ed84f24518f05c64e81bb0e2 463 SMART SM00283 28 289 3.3E-28 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS09100 e3607bd0ed84f24518f05c64e81bb0e2 463 PANTHER PTHR32089 11 292 7.2E-45 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 SMART SM00487 19 228 2.2E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 SMART SM00490 269 354 7.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 11 805 0.0 T 22-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 SUPERFAMILY SSF52540 33 194 7.72E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 SUPERFAMILY SSF52540 222 360 7.72E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.6E-23 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031 22 205 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031 794 813 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031 224 372 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 Gene3D G3DSA:3.40.50.300 242 363 2.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031:SF122 22 205 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031:SF122 794 813 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PANTHER PTHR24031:SF122 224 372 3.9E-65 T 22-04-2016 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 PIRSF PIRSF037307 4 814 3.5E-198 T 22-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 Gene3D G3DSA:3.40.50.300 11 200 1.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 Pfam PF08494 DEAD/H associated 592 777 2.7E-44 T 22-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMK58_RS09035 86320d5352a4f8111de4fbff018e4ff7 825 Pfam PF00271 Helicase conserved C-terminal domain 245 349 2.5E-16 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 Gene3D G3DSA:3.20.20.80 55 308 1.7E-24 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 PANTHER PTHR16631 25 318 7.2E-44 T 22-04-2016 AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 SUPERFAMILY SSF51445 43 308 2.61E-41 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 Pfam PF13641 Glycosyltransferase like family 2 426 655 9.8E-35 T 22-04-2016 AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 Gene3D G3DSA:3.90.550.10 426 669 3.3E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS09800 ca97d5d29a06cfa508d01d2c46b2cd18 883 SUPERFAMILY SSF53448 415 669 4.01E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Pfam PF00072 Response regulator receiver domain 8 117 1.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Pfam PF02954 Bacterial regulatory protein, Fis family 432 469 5.3E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Gene3D G3DSA:1.10.10.60 429 468 1.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 SUPERFAMILY SSF52172 5 189 8.68E-41 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Gene3D G3DSA:3.40.50.2300 6 129 1.6E-32 T 22-04-2016 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 SMART SM00448 6 117 1.6E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Gene3D G3DSA:3.40.50.300 142 317 9.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 SUPERFAMILY SSF52540 145 387 5.33E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 SMART SM00382 165 308 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Gene3D G3DSA:1.10.8.60 318 392 1.6E-22 T 22-04-2016 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 Pfam PF00158 Sigma-54 interaction domain 146 312 2.8E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 PANTHER PTHR32071 8 473 1.0E-187 T 22-04-2016 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 PANTHER PTHR32071:SF33 8 473 1.0E-187 T 22-04-2016 AMK58_RS01100 6cf9bcb4bb390fadd91608454370aa1b 478 SUPERFAMILY SSF46689 358 468 1.88E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PANTHER PTHR30531:SF0 5 358 9.3E-119 T 22-04-2016 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 SUPERFAMILY SSF160544 245 352 6.67E-43 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 353 3.3E-119 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 348 5.2E-121 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 Gene3D G3DSA:3.40.1690.10 219 354 1.1E-62 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 7.2E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 7.2E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 7.2E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 7.2E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 7.2E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10055 ef501535687742689fe42ba99b12d561 358 PANTHER PTHR30531 5 358 9.3E-119 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 61 1.9E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 Gene3D G3DSA:1.20.5.1030 5 61 1.4E-21 T 22-04-2016 AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 PANTHER PTHR33910:SF1 7 64 4.0E-18 T 22-04-2016 AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 60 12.119 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 60 9.5E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AMK58_RS10475 46e75326e61f56c698f0b27890a71756 65 PANTHER PTHR33910 7 64 4.0E-18 T 22-04-2016 AMK58_RS28530 2ed554580fa9c3af1ebb68ca43c733d4 134 PANTHER PTHR30538 22 134 3.8E-30 T 22-04-2016 AMK58_RS28530 2ed554580fa9c3af1ebb68ca43c733d4 134 PANTHER PTHR30538:SF1 22 134 3.8E-30 T 22-04-2016 AMK58_RS28530 2ed554580fa9c3af1ebb68ca43c733d4 134 Gene3D G3DSA:3.20.20.70 73 127 5.3E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS28530 2ed554580fa9c3af1ebb68ca43c733d4 134 SUPERFAMILY SSF102114 73 131 2.22E-9 T 22-04-2016 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 SUPERFAMILY SSF55874 224 392 3.01E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 Gene3D G3DSA:1.10.287.130 159 220 1.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 1.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 372 1.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 333 1.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 Gene3D G3DSA:3.10.580.10 36 137 5.0E-5 T 22-04-2016 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 SUPERFAMILY SSF47384 151 236 5.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 SMART SM00387 281 394 9.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 SUPERFAMILY SSF54631 34 140 1.24E-6 T 22-04-2016 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 PANTHER PTHR24423 145 394 6.6E-80 T 22-04-2016 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 Gene3D G3DSA:3.30.565.10 221 392 2.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 235 1.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 SMART SM00388 166 235 1.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01165 1ae9c0c78b285fa9afa22d380f510101 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 282 393 3.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02020 9fd4619483ea63071310faf0543d301a 251 Gene3D G3DSA:3.40.50.10090 128 216 1.9E-10 T 22-04-2016 AMK58_RS02020 9fd4619483ea63071310faf0543d301a 251 Gene3D G3DSA:3.40.50.10090 5 110 8.0E-12 T 22-04-2016 AMK58_RS02020 9fd4619483ea63071310faf0543d301a 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 238 3.6E-33 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS02020 9fd4619483ea63071310faf0543d301a 251 SUPERFAMILY SSF69618 4 242 2.75E-43 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 95 109 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 PANTHER PTHR12001 14 338 2.8E-116 T 22-04-2016 IPR017446 Polyprenyl synthetase-related AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 217 229 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 Pfam PF00348 Polyprenyl synthetase 46 290 3.6E-71 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 Gene3D G3DSA:1.10.600.10 17 337 1.2E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 SUPERFAMILY SSF48576 15 337 5.9E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain AMK58_RS04055 079b0116d0ec24541f321b39e9b7b71d 338 PANTHER PTHR12001:SF47 14 338 2.8E-116 T 22-04-2016 AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 SUPERFAMILY SSF47188 9 137 3.14E-35 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 PANTHER PTHR37164 11 143 1.3E-36 T 22-04-2016 AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 Pfam PF01814 Hemerythrin HHE cation binding domain 24 133 7.1E-14 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 ProSitePatterns PS00550 Hemerythrin family signature. 67 90 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 14 137 5.1E-34 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10935 e7d8b0eb26c2e57a18e390d638b778a0 144 Gene3D G3DSA:1.20.120.50 11 137 2.3E-36 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 Gene3D G3DSA:3.40.190.10 92 177 3.7E-19 T 22-04-2016 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 SUPERFAMILY SSF53850 91 297 2.17E-44 T 22-04-2016 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 Gene3D G3DSA:1.10.10.10 5 89 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 PANTHER PTHR30419:SF2 1 292 1.2E-69 T 22-04-2016 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 Gene3D G3DSA:3.40.190.10 178 265 7.6E-21 T 22-04-2016 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 PANTHER PTHR30419 1 292 1.2E-69 T 22-04-2016 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 Pfam PF03466 LysR substrate binding domain 90 293 3.6E-42 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 2.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS03160 ccbf5d6788b97782fa690fe2da6e52a8 301 SUPERFAMILY SSF46785 4 111 1.69E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 SUPERFAMILY SSF52540 48 237 5.63E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 19 240 3.5E-107 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 Gene3D G3DSA:3.40.50.300 15 252 8.4E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 PANTHER PTHR34383:SF1 22 272 2.1E-168 T 22-04-2016 AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 PANTHER PTHR34383 22 272 2.1E-168 T 22-04-2016 AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 PIRSF PIRSF028756 11 272 2.2E-125 T 22-04-2016 IPR016898 Polyphosphate kinase 2 AMK58_RS05665 0342ed85b739b007383f0156ee1049e2 272 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 19 241 1.4E-113 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 SMART SM00267 200 368 2.0E-50 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 Gene3D G3DSA:3.30.70.270 212 367 8.2E-45 T 22-04-2016 AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 PANTHER PTHR10799 236 373 2.0E-23 T 22-04-2016 AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 SUPERFAMILY SSF55073 215 367 2.12E-41 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 364 1.3E-40 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13740 6135b65c390913a935bf5622c9685bf9 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 367 5.8E-46 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS22565 b76be9709157f97885118fa2e3cff017 141 Pfam PF00692 dUTPase 54 140 3.6E-17 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMK58_RS22565 b76be9709157f97885118fa2e3cff017 141 TIGRFAM TIGR00576 dut: dUTP diphosphatase 49 140 4.9E-37 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK58_RS22565 b76be9709157f97885118fa2e3cff017 141 SUPERFAMILY SSF51283 42 140 4.32E-34 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS22565 b76be9709157f97885118fa2e3cff017 141 PANTHER PTHR11241 44 141 2.2E-33 T 22-04-2016 AMK58_RS22565 b76be9709157f97885118fa2e3cff017 141 Gene3D G3DSA:2.70.40.10 45 141 7.4E-38 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS10905 9fcb3c0f3cc2aad59cc3088341b1c92e 155 PANTHER PTHR11803 1 154 7.4E-49 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family AMK58_RS10905 9fcb3c0f3cc2aad59cc3088341b1c92e 155 Gene3D G3DSA:3.30.1330.40 4 154 9.9E-65 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK58_RS10905 9fcb3c0f3cc2aad59cc3088341b1c92e 155 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 149 4.5E-40 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK58_RS10905 9fcb3c0f3cc2aad59cc3088341b1c92e 155 SUPERFAMILY SSF55298 4 154 4.56E-56 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK58_RS10905 9fcb3c0f3cc2aad59cc3088341b1c92e 155 PANTHER PTHR11803:SF2 1 154 7.4E-49 T 22-04-2016 AMK58_RS00120 a25b3521e5295837d84fa020547d97d9 159 SUPERFAMILY SSF54427 25 127 2.21E-31 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS00120 a25b3521e5295837d84fa020547d97d9 159 PANTHER PTHR33747 10 159 3.5E-26 T 22-04-2016 AMK58_RS00120 a25b3521e5295837d84fa020547d97d9 159 Pfam PF02810 SEC-C motif 141 159 1.9E-10 T 22-04-2016 IPR004027 SEC-C motif AMK58_RS00120 a25b3521e5295837d84fa020547d97d9 159 Gene3D G3DSA:3.10.450.50 2 159 2.8E-50 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS00120 a25b3521e5295837d84fa020547d97d9 159 SUPERFAMILY SSF103642 138 158 2.29E-8 T 22-04-2016 AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 Gene3D G3DSA:3.40.50.300 16 261 6.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 PANTHER PTHR24220:SF472 16 263 8.5E-143 T 22-04-2016 AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 PIRSF PIRSF039085 11 265 4.0E-118 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 Pfam PF00005 ABC transporter 30 189 9.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 SMART SM00382 39 237 5.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 SUPERFAMILY SSF52540 16 259 8.57E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01525 17e0f8eb873f203eccaa773532d1e529 268 PANTHER PTHR24220 16 263 8.5E-143 T 22-04-2016 AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 Gene3D G3DSA:3.40.50.2300 155 345 5.4E-73 T 22-04-2016 AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 PANTHER PTHR30483:SF8 14 421 8.5E-201 T 22-04-2016 AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 Pfam PF13433 Periplasmic binding protein domain 40 408 1.7E-170 T 22-04-2016 AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 SUPERFAMILY SSF53822 39 410 1.18E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 40 405 1.3E-171 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA AMK58_RS10615 1840dd4ffa3d28ed9c333879d20dc6f2 439 PANTHER PTHR30483 14 421 8.5E-201 T 22-04-2016 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 Pfam PF00072 Response regulator receiver domain 6 118 1.6E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 Gene3D G3DSA:1.10.10.10 157 214 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 PANTHER PTHR26402 4 212 7.2E-48 T 22-04-2016 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 SMART SM00448 4 118 1.2E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 SMART SM00421 152 209 1.0E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 SUPERFAMILY SSF52172 1 122 1.21E-19 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 Gene3D G3DSA:3.40.50.2300 2 156 2.0E-21 T 22-04-2016 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 PANTHER PTHR26402:SF151 4 212 7.2E-48 T 22-04-2016 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 SUPERFAMILY SSF46894 145 214 2.99E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS03800 4db14a277b10aa6c47aee24ca9ae6ec8 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SMART SM00490 307 390 3.5E-7 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SMART SM00487 10 204 2.8E-11 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SMART SM00382 27 170 5.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 Gene3D G3DSA:3.40.50.300 10 169 5.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SUPERFAMILY SSF52540 221 274 5.18E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SUPERFAMILY SSF52540 313 403 5.18E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 SUPERFAMILY SSF52540 24 172 5.18E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 Pfam PF00271 Helicase conserved C-terminal domain 317 390 1.1E-4 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 Gene3D G3DSA:3.40.50.300 244 277 1.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 Gene3D G3DSA:3.40.50.300 316 398 1.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01880 8742ed7d92f10cce3f4afee05be8b067 685 Pfam PF00270 DEAD/DEAH box helicase 15 159 1.8E-10 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 PANTHER PTHR21535:SF37 23 329 2.2E-104 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 SUPERFAMILY SSF143865 1 268 1.05E-35 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 SUPERFAMILY SSF144083 264 326 3.14E-21 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 Gene3D G3DSA:1.20.58.340 253 329 4.1E-29 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 Gene3D G3DSA:1.20.58.340 123 167 2.5E-4 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 PANTHER PTHR21535 23 329 2.2E-104 T 22-04-2016 AMK58_RS01480 072c25506218d0ee8d90632c605692f3 329 Pfam PF01544 CorA-like Mg2+ transporter protein 27 325 2.3E-55 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 PANTHER PTHR30483 58 257 5.4E-19 T 22-04-2016 AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 SUPERFAMILY SSF53822 67 263 6.06E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 PANTHER PTHR30483:SF7 58 257 5.4E-19 T 22-04-2016 AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 Pfam PF13458 Periplasmic binding protein 65 258 9.9E-30 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 Gene3D G3DSA:3.40.50.2300 176 264 2.6E-7 T 22-04-2016 AMK58_RS28755 3e916bd340d073e34d3b74d3f93640cf 266 Gene3D G3DSA:3.40.50.2300 65 172 3.5E-20 T 22-04-2016 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PANTHER PTHR23359 1 215 8.6E-90 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 Gene3D G3DSA:3.40.50.300 1 212 1.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 Pfam PF05191 Adenylate kinase, active site lid 127 163 1.3E-12 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 SUPERFAMILY SSF52540 1 213 1.85E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PRINTS PR00094 Adenylate kinase signature 32 46 9.8E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PRINTS PR00094 Adenylate kinase signature 81 97 9.8E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PRINTS PR00094 Adenylate kinase signature 161 176 9.8E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PRINTS PR00094 Adenylate kinase signature 4 17 9.8E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 PRINTS PR00094 Adenylate kinase signature 178 192 9.8E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.2E-79 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.668 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK58_RS10300 b41bcc8bc2da7472cc0879beeb3adcac 215 Pfam PF00406 Adenylate kinase 5 191 1.9E-56 T 22-04-2016 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 PANTHER PTHR11601:SF20 6 389 2.0E-168 T 22-04-2016 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 SUPERFAMILY SSF53383 6 378 3.19E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 6 386 3.1E-188 T 22-04-2016 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 Gene3D G3DSA:3.90.1150.10 251 374 2.9E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 Gene3D G3DSA:3.40.640.10 18 250 1.0E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 PIRSF PIRSF005572 3 384 8.7E-131 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 PANTHER PTHR11601 6 389 2.0E-168 T 22-04-2016 AMK58_RS04585 283e87e45ee29f9a0357ac8e235eaef8 401 Pfam PF00266 Aminotransferase class-V 6 369 1.3E-90 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK58_RS03060 bf4f43bcc68527b6e7f5f49719c0a819 413 Pfam PF00534 Glycosyl transferases group 1 215 379 1.3E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK58_RS03060 bf4f43bcc68527b6e7f5f49719c0a819 413 Pfam PF13439 Glycosyltransferase Family 4 44 197 5.9E-28 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK58_RS03060 bf4f43bcc68527b6e7f5f49719c0a819 413 SUPERFAMILY SSF53756 33 405 9.03E-84 T 22-04-2016 AMK58_RS03060 bf4f43bcc68527b6e7f5f49719c0a819 413 PANTHER PTHR12526 29 408 1.5E-61 T 22-04-2016 AMK58_RS03060 bf4f43bcc68527b6e7f5f49719c0a819 413 Gene3D G3DSA:3.40.50.2000 179 379 5.6E-31 T 22-04-2016 AMK58_RS20315 50cf2fe747b7279533779ef7d4adf9ad 194 Gene3D G3DSA:3.50.50.60 18 183 3.3E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS20315 50cf2fe747b7279533779ef7d4adf9ad 194 PANTHER PTHR40254 6 179 5.7E-24 T 22-04-2016 AMK58_RS20315 50cf2fe747b7279533779ef7d4adf9ad 194 Pfam PF13454 FAD-NAD(P)-binding 24 176 1.5E-39 T 22-04-2016 AMK58_RS20315 50cf2fe747b7279533779ef7d4adf9ad 194 PANTHER PTHR40254:SF1 6 179 5.7E-24 T 22-04-2016 AMK58_RS20315 50cf2fe747b7279533779ef7d4adf9ad 194 SUPERFAMILY SSF51905 19 183 4.03E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS09130 eb4d1d98beb451d67dca27d2be5936bf 270 SUPERFAMILY SSF53850 45 262 1.28E-19 T 22-04-2016 AMK58_RS09130 eb4d1d98beb451d67dca27d2be5936bf 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 260 2.4E-6 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 344 1.0E-115 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 PANTHER PTHR21091:SF2 14 344 5.9E-112 T 22-04-2016 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 345 46.665 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 PANTHER PTHR21091 14 344 5.9E-112 T 22-04-2016 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 342 1.5E-122 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 Gene3D G3DSA:3.20.20.210 6 344 5.7E-128 T 22-04-2016 AMK58_RS00425 ae639622d1aca8ed15a3d2dd9d333ef1 348 SUPERFAMILY SSF51726 6 344 7.32E-102 T 22-04-2016 AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 Pfam PF03023 MviN-like protein 29 469 2.9E-114 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PANTHER PTHR11206 215 442 1.7E-53 T 22-04-2016 AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PANTHER PTHR11206 502 513 1.7E-53 T 22-04-2016 AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 503 1.3E-126 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 357 376 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 52 68 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 33 52 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 133 157 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 157 178 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 409 426 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PRINTS PR01806 Virulence factor MviN signature 259 285 3.4E-70 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PIRSF PIRSF002869 1 514 2.3E-145 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PANTHER PTHR11206:SF90 215 442 1.7E-53 T 22-04-2016 AMK58_RS00100 2c96be894e63c373727de3e657d8cd13 524 PANTHER PTHR11206:SF90 502 513 1.7E-53 T 22-04-2016 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 PANTHER PTHR11808:SF12 270 429 6.9E-212 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 PANTHER PTHR11808:SF12 3 240 6.9E-212 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 Gene3D G3DSA:3.90.1150.10 293 428 1.8E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 PANTHER PTHR11808 270 429 6.9E-212 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 PANTHER PTHR11808 3 240 6.9E-212 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 426 3.0E-129 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 PIRSF PIRSF001434 1 429 2.0E-118 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 426 6.8E-180 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 SUPERFAMILY SSF53383 8 426 1.32E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS06705 06e08c2c148dbff54a61018a607d0ea4 429 Gene3D G3DSA:3.40.640.10 8 291 6.6E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Pfam PF00589 Phage integrase family 102 278 3.7E-41 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Gene3D G3DSA:1.10.150.130 2 89 2.4E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 SUPERFAMILY SSF56349 6 287 3.24E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 294 26.997 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Gene3D G3DSA:1.10.443.10 101 287 1.3E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 PANTHER PTHR30349 1 299 6.3E-91 T 22-04-2016 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 294 53.564 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 80 3.5E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK58_RS12510 fc5895024a60aff7b54edbe3df33d089 299 PANTHER PTHR30349:SF5 1 299 6.3E-91 T 22-04-2016 AMK58_RS00640 eccd1f52d9c3cf06a250ce0b9bfd7860 183 Pfam PF00582 Universal stress protein family 33 171 4.8E-13 T 22-04-2016 IPR006016 UspA GO:0006950 AMK58_RS00640 eccd1f52d9c3cf06a250ce0b9bfd7860 183 Gene3D G3DSA:3.40.50.620 35 171 2.1E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS00640 eccd1f52d9c3cf06a250ce0b9bfd7860 183 SUPERFAMILY SSF52402 36 171 7.67E-12 T 22-04-2016 AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 SMART SM00855 5 156 1.5E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 PANTHER PTHR23029 4 198 9.9E-40 T 22-04-2016 AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 Gene3D G3DSA:3.40.50.1240 4 199 1.0E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 PANTHER PTHR23029:SF28 4 198 9.9E-40 T 22-04-2016 AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 SUPERFAMILY SSF53254 5 200 1.07E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS12320 4b6e2ed431684d4ae350f763356ae59d 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 187 1.3E-37 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 25 272 1.1E-123 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 PANTHER PTHR24220:SF585 26 271 3.2E-138 T 22-04-2016 AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 Pfam PF00005 ABC transporter 40 196 6.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 Gene3D G3DSA:3.40.50.300 27 267 4.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 SUPERFAMILY SSF52540 26 259 8.52E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 SMART SM00382 49 259 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01045 e51e78b093480e2ed3d634ebb924efb5 272 PANTHER PTHR24220 26 271 3.2E-138 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 Gene3D G3DSA:1.10.10.10 1 81 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 Gene3D G3DSA:3.40.190.10 82 189 8.2E-25 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 SUPERFAMILY SSF46785 1 110 1.46E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 PANTHER PTHR30126:SF20 1 282 7.1E-98 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 SUPERFAMILY SSF53850 89 283 1.28E-38 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 Pfam PF03466 LysR substrate binding domain 86 282 2.4E-42 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 PANTHER PTHR30126 1 282 7.1E-98 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 Gene3D G3DSA:3.40.190.10 190 254 7.7E-15 T 22-04-2016 AMK58_RS01210 46a4ea7f4558642f46d2984f93f4ffc8 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Pfam PF02142 MGS-like domain 29 140 1.4E-24 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 SUPERFAMILY SSF53927 222 534 8.82E-130 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 SMART SM00798 146 459 1.2E-208 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Gene3D G3DSA:3.40.140.20 251 369 1.2E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 PANTHER PTHR11692:SF2 15 534 2.5E-299 T 22-04-2016 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Gene3D G3DSA:3.40.140.20 375 524 1.0E-57 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 PANTHER PTHR11692 15 534 2.5E-299 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 SUPERFAMILY SSF52335 17 207 6.72E-67 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 SMART SM00851 29 141 7.1E-51 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Pfam PF01808 AICARFT/IMPCHase bienzyme 146 458 6.8E-121 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 PIRSF PIRSF000414 13 534 4.4E-214 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 17 534 44.427 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 Gene3D G3DSA:3.40.50.1380 15 199 4.7E-80 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK58_RS02110 35b960fdd3449035a4bc60617faec88e 534 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 19 534 1.6E-210 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Pfam PF13432 Tetratricopeptide repeat 280 334 0.006 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Pfam PF13432 Tetratricopeptide repeat 13 67 0.0057 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Pfam PF13432 Tetratricopeptide repeat 219 273 2.7E-4 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SUPERFAMILY SSF53756 361 615 1.73E-16 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SUPERFAMILY SSF48452 197 328 2.92E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Gene3D G3DSA:1.25.40.10 194 323 8.8E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Gene3D G3DSA:1.25.40.10 11 184 3.0E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 274 307 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 110 143 160.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 38 71 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 144 177 57.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 76 109 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 240 273 0.44 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SMART SM00028 206 239 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Gene3D G3DSA:3.40.50.2000 474 614 8.4E-12 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 PANTHER PTHR23083 8 332 5.8E-38 T 22-04-2016 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 SUPERFAMILY SSF48452 8 178 2.99E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS00880 bdde2b695844a4c1c7b18f63551c46b2 634 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 478 582 1.1E-4 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 Pfam PF00999 Sodium/hydrogen exchanger family 7 375 1.4E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 SUPERFAMILY SSF51735 405 533 6.13E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 PANTHER PTHR16254:SF6 8 559 2.0E-201 T 22-04-2016 AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 Gene3D G3DSA:3.40.50.720 402 533 1.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 PANTHER PTHR16254 8 559 2.0E-201 T 22-04-2016 AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 11 284 5.0E-80 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AMK58_RS05470 5445d0ab41f60b8c993c14f938e0faec 602 Pfam PF02254 TrkA-N domain 405 518 4.6E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK58_RS01490 ec0bbffd833528a631f9889dd4d41999 119 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 16 92 2.0E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 AMK58_RS01490 ec0bbffd833528a631f9889dd4d41999 119 Gene3D G3DSA:3.30.1200.10 11 102 1.8E-26 T 22-04-2016 IPR003746 Protein of unknown function DUF167 AMK58_RS01490 ec0bbffd833528a631f9889dd4d41999 119 SUPERFAMILY SSF69786 11 101 1.28E-24 T 22-04-2016 IPR003746 Protein of unknown function DUF167 AMK58_RS01490 ec0bbffd833528a631f9889dd4d41999 119 SMART SM01152 13 94 2.1E-33 T 22-04-2016 IPR003746 Protein of unknown function DUF167 AMK58_RS01490 ec0bbffd833528a631f9889dd4d41999 119 Hamap MF_00634 UPF0235 protein YggU [yggU]. 13 105 19.314 T 22-04-2016 IPR003746 Protein of unknown function DUF167 AMK58_RS08280 97cd817475acc8f77165feee32f102c0 183 Pfam PF03981 Ubiquinol-cytochrome C chaperone 34 174 1.5E-36 T 22-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AMK58_RS08280 97cd817475acc8f77165feee32f102c0 183 PANTHER PTHR12184 7 177 3.2E-23 T 22-04-2016 IPR007129 Ubiquinol-cytochrome c chaperone, CBP3 AMK58_RS12835 c0903375efb83a946be9e00dc3ff5a9e 247 SUPERFAMILY SSF53271 69 243 4.06E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS12835 c0903375efb83a946be9e00dc3ff5a9e 247 Pfam PF00156 Phosphoribosyl transferase domain 187 242 3.6E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS12835 c0903375efb83a946be9e00dc3ff5a9e 247 PANTHER PTHR11907:SF9 19 246 1.5E-53 T 22-04-2016 AMK58_RS12835 c0903375efb83a946be9e00dc3ff5a9e 247 PANTHER PTHR11907 19 246 1.5E-53 T 22-04-2016 AMK58_RS12835 c0903375efb83a946be9e00dc3ff5a9e 247 Gene3D G3DSA:3.40.50.2020 69 244 6.1E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS06015 99639ed54ed0815cbf9b3b2cfd981034 241 PANTHER PTHR23291:SF42 25 241 2.8E-75 T 22-04-2016 AMK58_RS06015 99639ed54ed0815cbf9b3b2cfd981034 241 PANTHER PTHR23291 25 241 2.8E-75 T 22-04-2016 IPR006214 Bax inhibitor 1-related AMK58_RS06015 99639ed54ed0815cbf9b3b2cfd981034 241 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 237 3.4E-64 T 22-04-2016 AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 Gene3D G3DSA:3.90.1140.10 3 177 3.4E-56 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 PANTHER PTHR35561:SF1 1 178 7.1E-48 T 22-04-2016 AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 SUPERFAMILY SSF55144 2 177 9.07E-48 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 177 27.429 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 PANTHER PTHR35561 1 178 7.1E-48 T 22-04-2016 AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 2 175 8.7E-52 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 Pfam PF02834 LigT like Phosphoesterase 9 86 3.7E-17 T 22-04-2016 IPR014051 Phosphoesterase, HXTX AMK58_RS13710 2944f3549f4a488c4b65b4e33eabaf97 178 Pfam PF02834 LigT like Phosphoesterase 92 167 8.0E-14 T 22-04-2016 IPR014051 Phosphoesterase, HXTX AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Pfam PF12801 4Fe-4S binding domain 102 142 1.5E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Gene3D G3DSA:3.30.70.20 289 319 1.7E-5 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 41 491 4.4E-152 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 PANTHER PTHR24960:SF45 1 407 3.8E-110 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 280 291 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 SUPERFAMILY SSF54862 179 336 4.6E-27 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 SUPERFAMILY SSF54862 110 133 4.6E-27 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Pfam PF13746 4Fe-4S dicluster domain 224 332 3.1E-39 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Gene3D G3DSA:2.60.40.10 368 493 3.6E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Gene3D G3DSA:1.10.1060.10 228 288 2.3E-7 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 PANTHER PTHR24960 1 407 3.8E-110 T 22-04-2016 AMK58_RS10005 109ba322904e454aca0c1ecc24e1053c 493 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 368 493 6.1E-30 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.5E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 PANTHER PTHR15184 19 402 1.8E-187 T 22-04-2016 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SMART SM00382 170 349 8.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SUPERFAMILY SSF68912 1 45 1.02E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Gene3D G3DSA:1.10.720.10 1 46 1.9E-22 T 22-04-2016 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SMART SM00959 5 47 3.1E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.3E-23 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 PANTHER PTHR15184:SF34 19 402 1.8E-187 T 22-04-2016 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SUPERFAMILY SSF50249 49 125 2.68E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Gene3D G3DSA:2.40.50.140 49 117 3.1E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.7E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 1.0E-213 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Gene3D G3DSA:3.40.50.300 130 417 1.4E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SUPERFAMILY SSF52540 90 371 1.42E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 SMART SM00357 52 118 9.7E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK58_RS00450 b87e23d7f024bfe98a657121322a16c3 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 249.678 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMK58_RS06325 a8da05a07b7851ae5e93bc977559899d 280 Pfam PF06230 Protein of unknown function (DUF1009) 60 270 2.5E-75 T 22-04-2016 IPR010415 Protein of unknown function DUF1009 AMK58_RS06325 a8da05a07b7851ae5e93bc977559899d 280 PANTHER PTHR39962:SF1 7 272 1.3E-63 T 22-04-2016 AMK58_RS06325 a8da05a07b7851ae5e93bc977559899d 280 PANTHER PTHR39962 7 272 1.3E-63 T 22-04-2016 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 412 4.7E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 Gene3D G3DSA:1.20.1250.20 259 457 8.5E-20 T 22-04-2016 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 Gene3D G3DSA:1.20.1250.20 10 191 1.7E-32 T 22-04-2016 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 Pfam PF07690 Major Facilitator Superfamily 12 403 4.2E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 PANTHER PTHR23501 2 466 7.4E-155 T 22-04-2016 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 PANTHER PTHR23501:SF66 2 466 7.4E-155 T 22-04-2016 AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 SUPERFAMILY SSF103473 242 453 3.79E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS12100 f74b6478a24a03413a5b6adcd02d64bd 479 SUPERFAMILY SSF103473 5 191 3.79E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 Pfam PF01435 Peptidase family M48 32 219 1.5E-29 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 Gene3D G3DSA:3.30.2010.10 26 107 1.0E-15 T 22-04-2016 AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 PANTHER PTHR22726 16 308 3.9E-47 T 22-04-2016 AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 SUPERFAMILY SSF48452 260 392 1.59E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 PANTHER PTHR22726:SF10 16 308 3.9E-47 T 22-04-2016 AMK58_RS10755 f160e263a99e8e0c51dafb44345b7a33 438 Gene3D G3DSA:1.25.40.10 263 399 5.1E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS07555 c4e1ba68e1bc3eb9c562048351ffc6e6 307 Gene3D G3DSA:3.40.50.300 27 223 1.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07555 c4e1ba68e1bc3eb9c562048351ffc6e6 307 PANTHER PTHR22908:SF67 7 294 1.4E-113 T 22-04-2016 AMK58_RS07555 c4e1ba68e1bc3eb9c562048351ffc6e6 307 PANTHER PTHR22908 7 294 1.4E-113 T 22-04-2016 AMK58_RS07555 c4e1ba68e1bc3eb9c562048351ffc6e6 307 SUPERFAMILY SSF52540 39 285 2.89E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07555 c4e1ba68e1bc3eb9c562048351ffc6e6 307 Pfam PF07728 AAA domain (dynein-related subfamily) 41 195 3.2E-10 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 SUPERFAMILY SSF54637 468 556 1.21E-9 T 22-04-2016 IPR029069 HotDog domain AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 Gene3D G3DSA:3.40.50.980 120 272 3.6E-13 T 22-04-2016 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 Pfam PF00501 AMP-binding enzyme 120 276 9.2E-17 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 SUPERFAMILY SSF56801 20 432 1.44E-47 T 22-04-2016 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 Gene3D G3DSA:3.30.300.30 328 432 2.3E-8 T 22-04-2016 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 PANTHER PTHR24095 311 420 2.5E-12 T 22-04-2016 AMK58_RS11190 698e71f83dbd5b4270259028ed730b57 563 Gene3D G3DSA:3.10.129.10 466 556 2.3E-8 T 22-04-2016 IPR029069 HotDog domain AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Pfam PF02817 e3 binding domain 118 150 1.4E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Gene3D G3DSA:3.30.559.10 182 415 1.0E-95 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Gene3D G3DSA:2.40.50.100 1 95 2.7E-30 T 22-04-2016 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 417 2.5E-180 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 SUPERFAMILY SSF52777 187 416 3.74E-91 T 22-04-2016 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 PANTHER PTHR23151 3 417 8.2E-226 T 22-04-2016 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 415 7.9E-84 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 SUPERFAMILY SSF51230 1 95 1.01E-27 T 22-04-2016 IPR011053 Single hybrid motif AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Pfam PF00364 Biotin-requiring enzyme 4 75 1.5E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 PANTHER PTHR23151:SF47 3 417 8.2E-226 T 22-04-2016 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 SUPERFAMILY SSF47005 114 155 1.26E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK58_RS02555 c163738c4df3b383b1b94145f3d3c93e 417 Gene3D G3DSA:4.10.320.10 118 156 6.0E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK58_RS06415 11dddc10dca668c44622b89d38fd31c3 396 SUPERFAMILY SSF88713 173 389 1.59E-72 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS06415 11dddc10dca668c44622b89d38fd31c3 396 Gene3D G3DSA:3.20.20.370 163 392 5.4E-87 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS06415 11dddc10dca668c44622b89d38fd31c3 396 Pfam PF04748 Divergent polysaccharide deacetylase 178 389 1.4E-80 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ AMK58_RS06415 11dddc10dca668c44622b89d38fd31c3 396 PANTHER PTHR30105 164 391 2.0E-67 T 22-04-2016 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 464 3.5E-64 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 Gene3D G3DSA:1.10.45.10 426 464 1.2E-9 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 Gene3D G3DSA:3.30.43.10 9 105 8.8E-29 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 PANTHER PTHR11748:SF97 12 465 7.1E-243 T 22-04-2016 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 SUPERFAMILY SSF55103 228 465 3.43E-71 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 Pfam PF01565 FAD binding domain 51 187 2.2E-39 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 Gene3D G3DSA:3.30.465.10 107 225 6.0E-47 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 SUPERFAMILY SSF56176 12 225 1.82E-70 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS04010 ed28f1dc056a34af07fe1d14e73059aa 467 PANTHER PTHR11748 12 465 7.1E-243 T 22-04-2016 AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 320 4.7E-22 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 Pfam PF01300 Telomere recombination 21 198 3.4E-56 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 PANTHER PTHR17490:SF3 12 323 1.5E-100 T 22-04-2016 AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 Gene3D G3DSA:3.90.870.10 14 210 2.6E-73 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 SUPERFAMILY SSF55821 14 211 2.04E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 15 209 1.6E-57 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 PANTHER PTHR17490 12 323 1.5E-100 T 22-04-2016 AMK58_RS04860 f609cf93f67d9acd4284d9be36c7d8f7 323 PIRSF PIRSF004930 8 323 2.7E-108 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AMK58_RS07540 5b062525f75a13610800ebd9da83c4f7 238 PANTHER PTHR30388:SF4 50 237 1.3E-65 T 22-04-2016 AMK58_RS07540 5b062525f75a13610800ebd9da83c4f7 238 PANTHER PTHR30388 50 237 1.3E-65 T 22-04-2016 AMK58_RS07540 5b062525f75a13610800ebd9da83c4f7 238 Pfam PF13478 XdhC Rossmann domain 87 228 2.9E-44 T 22-04-2016 IPR027051 XdhC Rossmann domain AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 Gene3D G3DSA:3.40.50.2300 1 116 1.9E-17 T 22-04-2016 AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 SMART SM00448 1 111 2.0E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 PANTHER PTHR24423 1 103 9.6E-16 T 22-04-2016 AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 PANTHER PTHR24423:SF439 1 103 9.6E-16 T 22-04-2016 AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 SUPERFAMILY SSF52172 1 116 9.11E-19 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01275 5dafc500a24cca56c08b0d0b90b32e33 119 Pfam PF00072 Response regulator receiver domain 1 111 6.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 Pfam PF00005 ABC transporter 44 182 4.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 Gene3D G3DSA:3.40.50.300 16 231 3.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 PANTHER PTHR24220 22 267 5.2E-97 T 22-04-2016 AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 SUPERFAMILY SSF52540 21 252 1.22E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 SMART SM00382 52 232 1.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS06605 99d072c9e0a7aa70e85b167de2ae2156 284 PANTHER PTHR24220:SF561 22 267 5.2E-97 T 22-04-2016 AMK58_RS13305 c98b27f94826c0232377d0d7c3e9c836 177 Gene3D G3DSA:1.20.1260.10 15 159 4.5E-36 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS13305 c98b27f94826c0232377d0d7c3e9c836 177 SUPERFAMILY SSF47240 15 163 2.18E-30 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS13305 c98b27f94826c0232377d0d7c3e9c836 177 Pfam PF02915 Rubrerythrin 107 160 9.3E-8 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 AMK58_RS13305 c98b27f94826c0232377d0d7c3e9c836 177 Pfam PF02915 Rubrerythrin 15 90 1.1E-8 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 AMK58_RS10080 5cdd2bcd2709a0923ad05deba252ae26 134 PANTHER PTHR30435 3 131 1.3E-19 T 22-04-2016 AMK58_RS10080 5cdd2bcd2709a0923ad05deba252ae26 134 PIRSF PIRSF002889 1 133 1.8E-21 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMK58_RS10080 5cdd2bcd2709a0923ad05deba252ae26 134 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 9 130 1.5E-21 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMK58_RS10080 5cdd2bcd2709a0923ad05deba252ae26 134 PANTHER PTHR30435:SF12 3 131 1.3E-19 T 22-04-2016 AMK58_RS10080 5cdd2bcd2709a0923ad05deba252ae26 134 Pfam PF00460 Flagella basal body rod protein 22 39 7.9E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 Pfam PF01227 GTP cyclohydrolase I 36 213 3.7E-75 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 PANTHER PTHR11109 32 221 2.0E-98 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 SUPERFAMILY SSF55620 24 214 1.41E-76 T 22-04-2016 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 141 151 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 93 109 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 Gene3D G3DSA:3.30.1130.10 87 214 3.5E-58 T 22-04-2016 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 36 213 1.7E-67 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 Gene3D G3DSA:1.10.286.10 30 81 2.0E-22 T 22-04-2016 AMK58_RS01695 783939c96ad973996996245a40ab37b8 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 31 214 39.137 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 414 1.1E-223 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 Gene3D G3DSA:3.30.1540.10 244 324 2.2E-30 T 22-04-2016 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 PANTHER PTHR24023 253 402 6.1E-29 T 22-04-2016 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 PANTHER PTHR24023 36 212 6.1E-29 T 22-04-2016 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 415 66.294 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 PANTHER PTHR24023:SF593 253 402 6.1E-29 T 22-04-2016 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 PANTHER PTHR24023:SF593 36 212 6.1E-29 T 22-04-2016 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 Gene3D G3DSA:3.40.50.10540 3 215 1.1E-107 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 Gene3D G3DSA:3.40.50.10540 325 415 1.1E-107 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 Pfam PF02515 CoA-transferase family III 5 391 1.8E-103 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMK58_RS06925 ad27533b9596046859d22630abe1bfa5 425 SUPERFAMILY SSF89796 3 414 8.5E-125 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 SUPERFAMILY SSF48498 100 215 2.19E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 PANTHER PTHR30055 20 220 1.1E-62 T 22-04-2016 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 46 76 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 SUPERFAMILY SSF46689 21 92 8.48E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 8.0E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 8.0E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 Gene3D G3DSA:1.10.10.60 21 86 1.0E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 Gene3D G3DSA:1.10.357.10 89 217 9.9E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 79 6.8E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS00140 e7169f4737c6c08c914b2fe10772e8bf 225 PANTHER PTHR30055:SF34 20 220 1.1E-62 T 22-04-2016 AMK58_RS07230 e9c8fd41dea2900fde4a28a407383bf2 557 PANTHER PTHR33908:SF3 16 448 1.9E-66 T 22-04-2016 AMK58_RS07230 e9c8fd41dea2900fde4a28a407383bf2 557 PANTHER PTHR33908 16 448 1.9E-66 T 22-04-2016 AMK58_RS07230 e9c8fd41dea2900fde4a28a407383bf2 557 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 70 237 4.7E-16 T 22-04-2016 AMK58_RS05130 b368f117f8e70827f5723d989a3d1426 66 Pfam PF04325 Protein of unknown function (DUF465) 11 56 8.8E-16 T 22-04-2016 IPR007420 Protein of unknown function DUF465 AMK58_RS01720 fc015a7ae5b613df85715248a0a389e4 257 SUPERFAMILY SSF55166 26 140 5.49E-11 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS01720 fc015a7ae5b613df85715248a0a389e4 257 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 32 99 2.9E-5 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 SUPERFAMILY SSF47188 9 135 9.94E-27 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 PANTHER PTHR37164 9 150 3.9E-25 T 22-04-2016 AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 13 135 6.5E-28 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 Gene3D G3DSA:1.20.120.50 8 135 3.0E-26 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 Pfam PF01814 Hemerythrin HHE cation binding domain 20 132 1.0E-5 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS10920 12ac5a1c1ed68f768623d68d01194851 160 ProSitePatterns PS00550 Hemerythrin family signature. 65 88 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 Pfam PF01979 Amidohydrolase family 55 408 6.1E-26 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 Gene3D G3DSA:3.20.20.140 61 356 1.2E-68 T 22-04-2016 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 SUPERFAMILY SSF51338 371 410 1.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 SUPERFAMILY SSF51338 2 59 1.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 PANTHER PTHR11271:SF44 5 275 3.9E-91 T 22-04-2016 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 PANTHER PTHR11271:SF44 301 413 3.9E-91 T 22-04-2016 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 SUPERFAMILY SSF51556 59 371 2.27E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 Gene3D G3DSA:2.30.40.10 2 60 2.8E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 Gene3D G3DSA:2.30.40.10 381 413 2.8E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 PANTHER PTHR11271 5 275 3.9E-91 T 22-04-2016 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 PANTHER PTHR11271 301 413 3.9E-91 T 22-04-2016 AMK58_RS11105 b9cb5faf9c216250b6a550b18dbec35f 423 Gene3D G3DSA:2.30.40.10 357 380 5.4E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 Pfam PF03781 Sulfatase-modifying factor enzyme 1 179 319 5.9E-26 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 Pfam PF03781 Sulfatase-modifying factor enzyme 1 340 418 6.3E-8 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 SUPERFAMILY SSF109854 9 142 1.85E-6 T 22-04-2016 AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 PANTHER PTHR23150 11 421 2.3E-120 T 22-04-2016 AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 Gene3D G3DSA:3.90.1580.10 171 420 5.1E-59 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 PANTHER PTHR23150:SF24 11 421 2.3E-120 T 22-04-2016 AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 Pfam PF12867 DinB superfamily 15 130 4.0E-14 T 22-04-2016 IPR024775 DinB-like domain AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 SUPERFAMILY SSF56436 179 420 9.42E-69 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS05970 4994961b2db0718dfaba910f0ca184bc 421 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 11 418 1.8E-171 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 SMART SM00849 54 233 3.6E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 PANTHER PTHR11935:SF5 49 269 7.0E-19 T 22-04-2016 AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 Pfam PF00753 Metallo-beta-lactamase superfamily 55 233 3.4E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 PANTHER PTHR11935 49 269 7.0E-19 T 22-04-2016 AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 22 305 7.7E-130 T 22-04-2016 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 Gene3D G3DSA:3.60.15.10 23 256 3.4E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS03510 cede2752fa4151fc485a98fc0caac4fb 309 SUPERFAMILY SSF56281 8 303 4.34E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS05595 90a79a97fd7ea81f63faf9582a024a9e 324 PANTHER PTHR32196 15 324 3.6E-95 T 22-04-2016 AMK58_RS05595 90a79a97fd7ea81f63faf9582a024a9e 324 PANTHER PTHR32196:SF40 15 324 3.6E-95 T 22-04-2016 AMK58_RS05595 90a79a97fd7ea81f63faf9582a024a9e 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 302 3.0E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS02015 c91460787c4ba7ec6908f85c9e40b066 627 Gene3D G3DSA:1.10.260.40 41 80 4.8E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02015 c91460787c4ba7ec6908f85c9e40b066 627 Pfam PF09731 Mitochondrial inner membrane protein 422 604 9.1E-18 T 22-04-2016 IPR019133 Mitochondrial inner membrane protein Mitofilin AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 445 45.272 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 PIRSF PIRSF006815 1 446 1.3E-167 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 Pfam PF02347 Glycine cleavage system P-protein 1 438 1.9E-118 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 PANTHER PTHR11773 1 445 7.5E-190 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 Gene3D G3DSA:3.40.640.10 72 295 5.3E-20 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 PANTHER PTHR11773:SF2 1 445 7.5E-190 T 22-04-2016 AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 SUPERFAMILY SSF53383 1 446 7.51E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS09420 cfd22840ac0ff2a389786845588f5449 446 Gene3D G3DSA:3.90.1150.10 336 444 1.8E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS04675 c8e17050ddfbad058c71d3c123f85fe3 295 Pfam PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 31 291 1.2E-102 T 22-04-2016 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 9 191 35.975 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 PANTHER PTHR30327:SF1 10 191 1.4E-53 T 22-04-2016 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 Pfam PF02622 Uncharacterized ACR, COG1678 20 178 4.0E-47 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 Gene3D G3DSA:3.40.1740.10 5 48 5.3E-35 T 22-04-2016 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 Gene3D G3DSA:3.40.1740.10 135 181 5.3E-35 T 22-04-2016 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 PANTHER PTHR30327 10 191 1.4E-53 T 22-04-2016 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 Gene3D G3DSA:3.30.70.1300 54 134 7.3E-25 T 22-04-2016 AMK58_RS09475 76254f07d2a1e3e2a4d84e589fc0d369 191 SUPERFAMILY SSF143456 10 191 1.44E-62 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 PANTHER PTHR32332 3 83 1.3E-120 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 PANTHER PTHR32332 112 363 1.3E-120 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 Pfam PF03060 Nitronate monooxygenase 14 351 1.1E-88 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 PANTHER PTHR32332:SF12 3 83 1.3E-120 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 PANTHER PTHR32332:SF12 112 363 1.3E-120 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 Gene3D G3DSA:3.20.20.70 4 341 2.5E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 SUPERFAMILY SSF51412 3 76 3.66E-64 T 22-04-2016 AMK58_RS08780 c6368be0b49faa5bb8f330932ab55bfb 364 SUPERFAMILY SSF51412 103 359 3.66E-64 T 22-04-2016 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 Gene3D G3DSA:3.40.50.720 5 209 3.8E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 306 49.253 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 PANTHER PTHR10366 6 307 1.4E-141 T 22-04-2016 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 SUPERFAMILY SSF51735 2 308 2.99E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 PANTHER PTHR10366:SF246 6 307 1.4E-141 T 22-04-2016 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 238 7.2E-78 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 Gene3D G3DSA:3.90.25.10 285 308 3.7E-13 T 22-04-2016 AMK58_RS12385 a7d74b278dc10312964b7d0f9490e473 322 Gene3D G3DSA:3.90.25.10 210 232 3.7E-13 T 22-04-2016 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 4.7E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PANTHER PTHR30376 2 283 9.8E-100 T 22-04-2016 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 SUPERFAMILY SSF88659 190 287 3.36E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 285 51.4 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PRINTS PR00046 Major sigma-70 factor signature 253 268 5.5E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PRINTS PR00046 Major sigma-70 factor signature 101 109 5.5E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PRINTS PR00046 Major sigma-70 factor signature 268 279 5.5E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PRINTS PR00046 Major sigma-70 factor signature 77 90 5.5E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PRINTS PR00046 Major sigma-70 factor signature 234 246 5.5E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 PIRSF PIRSF000770 1 293 4.6E-38 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 284 1.4E-111 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 SUPERFAMILY SSF88946 11 121 3.45E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Pfam PF04542 Sigma-70 region 2 53 118 7.7E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Gene3D G3DSA:1.10.601.10 14 118 1.4E-40 T 22-04-2016 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Gene3D G3DSA:1.10.10.10 225 289 4.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Pfam PF04545 Sigma-70, region 4 230 281 1.7E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS09615 4e5d0bccc421bc7a1550cddb71f73af1 294 Pfam PF00140 Sigma-70 factor, region 1.2 17 43 3.7E-8 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS01235 c62cc5aab3deb86c738ab69f530109d9 488 PANTHER PTHR22726:SF9 46 259 3.6E-61 T 22-04-2016 AMK58_RS01235 c62cc5aab3deb86c738ab69f530109d9 488 Pfam PF01435 Peptidase family M48 71 254 4.8E-34 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK58_RS01235 c62cc5aab3deb86c738ab69f530109d9 488 Gene3D G3DSA:3.30.2010.10 65 144 8.0E-19 T 22-04-2016 AMK58_RS01235 c62cc5aab3deb86c738ab69f530109d9 488 PANTHER PTHR22726 46 259 3.6E-61 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 SUPERFAMILY SSF53850 48 382 6.92E-61 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PANTHER PTHR30222:SF5 5 345 1.3E-46 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PANTHER PTHR30222 5 345 1.3E-46 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 Pfam PF13416 Bacterial extracellular solute-binding protein 62 338 1.3E-26 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 Gene3D G3DSA:3.40.190.10 163 324 6.3E-34 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 Gene3D G3DSA:3.40.190.10 49 162 2.4E-17 T 22-04-2016 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 285 304 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 52 68 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 110 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 147 163 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 188 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS00915 2e7cb39dc851f681abbe7a44c77080d4 385 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 68 89 1.4E-22 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 SMART SM00411 1 90 1.1E-38 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.1E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 SUPERFAMILY SSF47729 1 90 7.65E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 Gene3D G3DSA:4.10.520.10 1 90 7.4E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.5E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.5E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.5E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK58_RS07900 52bc3b877d0b2dc72d64fb623b6747af 91 PANTHER PTHR33175 1 90 3.2E-36 T 22-04-2016 AMK58_RS11745 b351b39429f95b4d8435453e54d3eba2 413 Gene3D G3DSA:3.20.20.370 178 412 8.4E-71 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS11745 b351b39429f95b4d8435453e54d3eba2 413 PANTHER PTHR30105 154 410 3.8E-47 T 22-04-2016 AMK58_RS11745 b351b39429f95b4d8435453e54d3eba2 413 Pfam PF04748 Divergent polysaccharide deacetylase 194 407 1.6E-66 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ AMK58_RS11745 b351b39429f95b4d8435453e54d3eba2 413 SUPERFAMILY SSF88713 189 407 1.02E-59 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 SUPERFAMILY SSF56801 2 122 2.22E-41 T 22-04-2016 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 Gene3D G3DSA:2.30.38.10 2 65 1.6E-7 T 22-04-2016 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 Gene3D G3DSA:3.30.300.30 67 124 2.1E-16 T 22-04-2016 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 Pfam PF13193 AMP-binding enzyme C-terminal domain 81 126 8.4E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 PANTHER PTHR24095:SF178 1 126 1.4E-77 T 22-04-2016 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 PANTHER PTHR24095 1 126 1.4E-77 T 22-04-2016 AMK58_RS26970 9d85d0e01ba1321cada7f63eb76ab852 126 Pfam PF00501 AMP-binding enzyme 3 72 2.2E-12 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Gene3D G3DSA:3.40.50.2000 420 564 9.0E-13 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 242 275 0.002 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 4 37 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 208 240 60.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 140 173 30.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 38 71 47.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 72 105 24.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 174 207 0.0048 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SMART SM00028 106 139 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Gene3D G3DSA:1.25.40.10 220 292 4.7E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 PANTHER PTHR23083 11 303 1.7E-50 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SUPERFAMILY SSF48452 210 293 9.66E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SUPERFAMILY SSF48452 15 231 3.48E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Gene3D G3DSA:1.25.40.10 8 219 4.5E-44 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 SUPERFAMILY SSF53756 330 574 3.08E-23 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Pfam PF13432 Tetratricopeptide repeat 179 235 2.4E-8 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Pfam PF13432 Tetratricopeptide repeat 9 69 2.8E-6 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Pfam PF13432 Tetratricopeptide repeat 253 291 0.013 T 22-04-2016 AMK58_RS05155 f22fd1c8ae1633f048a430eae866dbe5 590 Pfam PF13432 Tetratricopeptide repeat 112 173 1.1E-4 T 22-04-2016 AMK58_RS07815 9e46c84554c5f635da7ecaecfa822e31 339 PANTHER PTHR37549 14 273 5.5E-12 T 22-04-2016 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 Gene3D G3DSA:1.10.287.950 110 252 9.5E-27 T 22-04-2016 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 SMART SM00283 84 327 1.5E-4 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 PANTHER PTHR32089 169 240 2.9E-17 T 22-04-2016 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 157 277 7.5E-22 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 SUPERFAMILY SSF58104 87 272 2.09E-32 T 22-04-2016 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 SUPERFAMILY SSF58104 7 37 2.09E-32 T 22-04-2016 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 179 206 7.1E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 7.1E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS26875 b69c5330de34b3a647caf9b352bfbd91 337 PANTHER PTHR32089:SF36 169 240 2.9E-17 T 22-04-2016 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 Pfam PF00072 Response regulator receiver domain 3 114 5.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 SUPERFAMILY SSF52172 1 130 2.13E-34 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 129 291 1.8E-48 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 PANTHER PTHR26402 1 116 5.3E-36 T 22-04-2016 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 Gene3D G3DSA:3.30.70.270 132 291 2.7E-53 T 22-04-2016 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 SMART SM00448 1 114 3.1E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 289 2.1E-44 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 Gene3D G3DSA:3.40.50.2300 1 117 9.3E-32 T 22-04-2016 AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 SUPERFAMILY SSF55073 136 291 1.8E-47 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS05940 fd27bec821e01cffd37c20778a7df92b 294 SMART SM00267 120 293 2.9E-61 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 SUPERFAMILY SSF52540 244 492 1.33E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 Gene3D G3DSA:3.40.50.300 242 495 9.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 SMART SM00382 278 471 2.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 SMART SM00382 34 220 4.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 Gene3D G3DSA:3.40.50.300 10 221 3.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 SUPERFAMILY SSF52540 10 86 1.37E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 SUPERFAMILY SSF52540 113 222 1.37E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 PANTHER PTHR24220 245 556 1.4E-70 T 22-04-2016 AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 473 531 4.7E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 Pfam PF00005 ABC transporter 270 421 1.1E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 Pfam PF00005 ABC transporter 25 163 5.5E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 PANTHER PTHR24220:SF544 245 556 1.4E-70 T 22-04-2016 AMK58_RS13240 3deac85696d498c39f0cc736cc6862f0 567 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 471 551 1.2E-15 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 PANTHER PTHR26402 5 229 2.4E-78 T 22-04-2016 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 1.3E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 Gene3D G3DSA:1.10.10.10 129 228 6.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 Pfam PF00072 Response regulator receiver domain 7 117 5.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 SUPERFAMILY SSF46894 126 228 1.63E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 SMART SM00862 152 227 1.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 Gene3D G3DSA:3.40.50.2300 5 128 4.3E-34 T 22-04-2016 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 PANTHER PTHR26402:SF50 5 229 2.4E-78 T 22-04-2016 AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 SUPERFAMILY SSF52172 5 161 3.42E-37 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS00285 df8f7dfaef8b55ed3e88153c99e38298 229 SMART SM00448 5 117 3.5E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 SUPERFAMILY SSF53822 38 406 1.51E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 Gene3D G3DSA:3.40.50.2300 175 291 6.5E-11 T 22-04-2016 AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 Gene3D G3DSA:3.40.50.2300 338 374 7.9E-11 T 22-04-2016 AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 Gene3D G3DSA:3.40.50.2300 41 159 7.9E-11 T 22-04-2016 AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 PANTHER PTHR30483 42 438 3.0E-21 T 22-04-2016 AMK58_RS12760 f8c72af51f95e1c99c243970345c7753 442 Pfam PF13458 Periplasmic binding protein 34 402 1.9E-76 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 SUPERFAMILY SSF50156 19 125 1.31E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 PANTHER PTHR22939:SF78 62 129 1.8E-18 T 22-04-2016 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 Pfam PF02163 Peptidase family M50 7 87 1.2E-8 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 PANTHER PTHR22939 62 129 1.8E-18 T 22-04-2016 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 Gene3D G3DSA:2.30.42.10 26 126 9.4E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 SMART SM00228 37 116 2.0E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS19925 b80e1e389ce662cbdfa595d5f1fa029e 136 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 62 111 4.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 Pfam PF10282 Lactonase, 7-bladed beta-propeller 23 81 4.2E-5 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 Pfam PF10282 Lactonase, 7-bladed beta-propeller 181 302 8.6E-6 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 24 61 8.3E-13 T 22-04-2016 IPR011964 YVTN beta-propeller repeat AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 280 320 3.2E-15 T 22-04-2016 IPR011964 YVTN beta-propeller repeat AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 104 145 6.9E-11 T 22-04-2016 IPR011964 YVTN beta-propeller repeat AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 16 321 2.6E-160 T 22-04-2016 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 PANTHER PTHR13833 25 185 3.1E-29 T 22-04-2016 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 PANTHER PTHR13833 278 320 3.1E-29 T 22-04-2016 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 Gene3D G3DSA:2.130.10.10 17 320 2.5E-74 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK58_RS03485 e430df5cb5dcb7bb9dfa76a8f141e49b 322 SUPERFAMILY SSF50974 5 320 3.4E-83 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal AMK58_RS03815 c17ab591bf9047430e5992433adbfb6a 357 Gene3D G3DSA:2.30.42.10 128 216 6.0E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS03815 c17ab591bf9047430e5992433adbfb6a 357 SUPERFAMILY SSF50156 127 216 1.31E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS03815 c17ab591bf9047430e5992433adbfb6a 357 SMART SM00228 105 209 2.8E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 PANTHER PTHR11732 2 271 6.9E-115 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 SUPERFAMILY SSF51430 4 275 1.15E-79 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 Pfam PF00248 Aldo/keto reductase family 17 265 6.1E-52 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 PANTHER PTHR11732:SF98 2 271 6.9E-115 T 22-04-2016 AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 PRINTS PR00069 Aldo-keto reductase signature 127 144 5.7E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 PRINTS PR00069 Aldo-keto reductase signature 201 225 5.7E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 PRINTS PR00069 Aldo-keto reductase signature 97 115 5.7E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS06860 babac65ed2a5a738834f3d932b2b5918 279 Gene3D G3DSA:3.20.20.100 8 273 1.6E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS18560 14f92b988781073346ebaf7a3bc3a2c0 82 PANTHER PTHR30621 2 82 9.8E-27 T 22-04-2016 AMK58_RS18560 14f92b988781073346ebaf7a3bc3a2c0 82 SUPERFAMILY SSF81301 2 81 8.83E-27 T 22-04-2016 AMK58_RS18560 14f92b988781073346ebaf7a3bc3a2c0 82 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 2 79 7.4E-30 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMK58_RS18560 14f92b988781073346ebaf7a3bc3a2c0 82 Gene3D G3DSA:3.30.460.10 2 81 1.6E-26 T 22-04-2016 AMK58_RS18465 f577b5004e104aa77b21e87b54297919 158 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 112 158 8.3E-7 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK58_RS18465 f577b5004e104aa77b21e87b54297919 158 SUPERFAMILY SSF53383 105 158 6.34E-8 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS18465 f577b5004e104aa77b21e87b54297919 158 Gene3D G3DSA:3.40.640.10 104 158 4.1E-8 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 SUPERFAMILY SSF52172 3 137 4.13E-18 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 SUPERFAMILY SSF46689 143 192 4.35E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 SMART SM00448 4 121 1.9E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 PANTHER PTHR32071 146 195 8.9E-13 T 22-04-2016 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 PANTHER PTHR32071:SF34 146 195 8.9E-13 T 22-04-2016 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 Pfam PF02954 Bacterial regulatory protein, Fis family 151 185 1.4E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 Pfam PF00072 Response regulator receiver domain 7 120 7.1E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 Gene3D G3DSA:3.40.50.2300 4 131 1.7E-18 T 22-04-2016 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 Gene3D G3DSA:1.10.10.60 138 192 3.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 173 193 4.25E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS01690 aeef27da197fd013194b731e84c99eb0 195 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 156 173 4.25E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS27520 3da1c0c2a738ed3f113e4e57899eca7c 37 Gene3D G3DSA:3.40.50.880 2 36 1.7E-4 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS27520 3da1c0c2a738ed3f113e4e57899eca7c 37 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 1 37 2.0E-8 T 22-04-2016 AMK58_RS27520 3da1c0c2a738ed3f113e4e57899eca7c 37 Pfam PF04204 Homoserine O-succinyltransferase 2 36 5.8E-5 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 SMART SM00662 27 234 1.0E-89 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 319 36.221 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Gene3D G3DSA:3.30.1360.10 180 233 3.0E-6 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 SUPERFAMILY SSF56553 57 178 2.35E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 SUPERFAMILY SSF55257 153 237 7.65E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 SUPERFAMILY SSF55257 14 61 7.65E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 228 3.4E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Gene3D G3DSA:3.30.1360.10 17 70 1.5E-8 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 67 159 5.9E-22 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 PANTHER PTHR32108:SF0 6 332 1.7E-135 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 PANTHER PTHR32108 6 332 1.7E-135 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 259 318 2.0E-27 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 310 1.2E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Gene3D G3DSA:1.10.150.20 248 330 4.8E-38 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 28 319 1.2E-114 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 SUPERFAMILY SSF47789 252 328 1.44E-27 T 22-04-2016 AMK58_RS05815 0cd394aa458c99bd0d6383ee09bc2964 339 Gene3D G3DSA:2.170.120.12 71 177 3.2E-44 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 Pfam PF07690 Major Facilitator Superfamily 23 417 2.4E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 SUPERFAMILY SSF103473 254 427 2.88E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 SUPERFAMILY SSF103473 471 496 2.88E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 SUPERFAMILY SSF103473 11 201 2.88E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.9E-10 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 308 332 1.9E-10 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 1.9E-10 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 1.9E-10 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.9E-10 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PANTHER PTHR23501:SF73 2 511 4.4E-182 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 PANTHER PTHR23501 2 511 4.4E-182 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 430 5.7E-73 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 Gene3D G3DSA:1.20.1250.20 20 193 5.4E-32 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 Gene3D G3DSA:1.20.1250.20 469 501 4.1E-22 T 22-04-2016 AMK58_RS09735 c7c87d3e4a3a5ba654caa1f854bae4f8 513 Gene3D G3DSA:1.20.1250.20 269 425 4.1E-22 T 22-04-2016 AMK58_RS05735 09274f6c20d9a560b3b5baa04cd1e4c6 372 Pfam PF05940 NnrS protein 14 366 3.1E-63 T 22-04-2016 IPR010266 NnrS AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 SUPERFAMILY SSF63867 362 434 6.54E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 PANTHER PTHR10192 5 449 2.2E-158 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Pfam PF00994 Probable molybdopterin binding domain 212 349 4.4E-23 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Gene3D G3DSA:2.40.340.10 363 434 2.6E-19 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Pfam PF12727 PBP superfamily domain 464 641 2.6E-54 T 22-04-2016 IPR024370 PBP domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 SUPERFAMILY SSF63882 30 208 1.18E-46 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Gene3D G3DSA:3.90.105.10 174 194 4.6E-20 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Gene3D G3DSA:3.90.105.10 49 71 4.6E-20 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Gene3D G3DSA:3.40.980.10 195 362 1.2E-53 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Pfam PF03454 MoeA C-terminal region (domain IV) 368 432 5.5E-13 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 SMART SM00852 212 350 1.8E-35 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 SUPERFAMILY SSF53850 462 655 2.24E-11 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Pfam PF03453 MoeA N-terminal region (domain I and II) 32 199 1.4E-31 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 SUPERFAMILY SSF53218 209 355 6.81E-37 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 209 346 3.0E-26 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 PANTHER PTHR10192:SF12 5 449 2.2E-158 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 Gene3D G3DSA:2.170.190.11 72 173 2.5E-25 T 22-04-2016 AMK58_RS12685 96c28847cf42364e54b38f58d477f13a 661 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 284 319 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 Pfam PF13458 Periplasmic binding protein 55 379 1.9E-42 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 PANTHER PTHR30483 48 377 2.5E-36 T 22-04-2016 AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 56 162 1.4E-34 T 22-04-2016 AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 288 371 1.4E-34 T 22-04-2016 AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 SUPERFAMILY SSF53822 57 383 8.54E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 164 270 1.5E-5 T 22-04-2016 AMK58_RS00030 f0052cc9ae9d950cbd7892ab95f5481d 396 PANTHER PTHR30483:SF7 48 377 2.5E-36 T 22-04-2016 AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 Pfam PF13458 Periplasmic binding protein 55 379 1.9E-42 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 PANTHER PTHR30483 48 377 2.5E-36 T 22-04-2016 AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 56 162 1.4E-34 T 22-04-2016 AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 288 371 1.4E-34 T 22-04-2016 AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 SUPERFAMILY SSF53822 57 383 8.54E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 Gene3D G3DSA:3.40.50.2300 164 270 1.5E-5 T 22-04-2016 AMK58_RS13845 f0052cc9ae9d950cbd7892ab95f5481d 396 PANTHER PTHR30483:SF7 48 377 2.5E-36 T 22-04-2016 AMK58_RS17815 7e38bc0b83d144420d30b1e02aa2420b 177 PANTHER PTHR18895 103 170 2.5E-13 T 22-04-2016 AMK58_RS17815 7e38bc0b83d144420d30b1e02aa2420b 177 SUPERFAMILY SSF53335 76 177 2.54E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS17815 7e38bc0b83d144420d30b1e02aa2420b 177 Pfam PF05175 Methyltransferase small domain 92 166 6.5E-8 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK58_RS17815 7e38bc0b83d144420d30b1e02aa2420b 177 PANTHER PTHR18895:SF64 103 170 2.5E-13 T 22-04-2016 AMK58_RS17815 7e38bc0b83d144420d30b1e02aa2420b 177 Gene3D G3DSA:3.40.50.150 90 177 8.2E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11440 3de3e556046459af48a55813281285fe 217 SUPERFAMILY SSF48150 24 192 1.33E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS11440 3de3e556046459af48a55813281285fe 217 Gene3D G3DSA:1.10.1670.10 141 193 1.0E-13 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK58_RS11440 3de3e556046459af48a55813281285fe 217 Gene3D G3DSA:1.10.340.30 33 140 6.6E-28 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK58_RS11440 3de3e556046459af48a55813281285fe 217 PANTHER PTHR10242:SF0 3 189 3.3E-49 T 22-04-2016 AMK58_RS11440 3de3e556046459af48a55813281285fe 217 SMART SM00478 41 193 4.7E-16 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS11440 3de3e556046459af48a55813281285fe 217 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 179 1.2E-15 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK58_RS11440 3de3e556046459af48a55813281285fe 217 PANTHER PTHR10242 3 189 3.3E-49 T 22-04-2016 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 SUPERFAMILY SSF52172 1 126 4.55E-23 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 SMART SM00421 148 205 2.5E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 PANTHER PTHR26402:SF151 1 209 1.9E-46 T 22-04-2016 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 Gene3D G3DSA:3.40.50.2300 1 126 9.1E-24 T 22-04-2016 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 PANTHER PTHR26402 1 209 1.9E-46 T 22-04-2016 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 9.6E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 SUPERFAMILY SSF46894 142 209 2.21E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 Pfam PF00072 Response regulator receiver domain 3 108 1.7E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 SMART SM00448 1 114 1.2E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07295 fc3a5386a1f92900f6195ecbb9ac9657 214 Gene3D G3DSA:1.10.10.10 141 209 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01680 ececed1ac436b0ec2b1174b4c9570622 272 SUPERFAMILY SSF103481 30 131 3.14E-9 T 22-04-2016 AMK58_RS01680 ececed1ac436b0ec2b1174b4c9570622 272 Pfam PF00892 EamA-like transporter family 11 127 3.4E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS01680 ececed1ac436b0ec2b1174b4c9570622 272 Pfam PF00892 EamA-like transporter family 137 261 1.1E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS01680 ececed1ac436b0ec2b1174b4c9570622 272 PANTHER PTHR22911 10 272 1.5E-33 T 22-04-2016 AMK58_RS01680 ececed1ac436b0ec2b1174b4c9570622 272 SUPERFAMILY SSF103481 171 270 3.27E-10 T 22-04-2016 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 PANTHER PTHR30445:SF1 5 559 1.1E-218 T 22-04-2016 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Gene3D G3DSA:3.30.70.1450 303 370 1.8E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Gene3D G3DSA:3.30.70.1450 221 285 9.0E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 PANTHER PTHR30445 5 559 1.1E-218 T 22-04-2016 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Pfam PF06826 Predicted Permease Membrane Region 21 189 2.4E-40 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Pfam PF06826 Predicted Permease Membrane Region 384 555 2.3E-45 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 SUPERFAMILY SSF116726 217 285 4.71E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Pfam PF02080 TrkA-C domain 221 285 1.0E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 Pfam PF02080 TrkA-C domain 305 370 1.8E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 SUPERFAMILY SSF116726 303 370 2.22E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 28 176 2.9E-34 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS01535 b35189ced20ad86a33a355e7c8f3c429 559 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 389 542 1.8E-45 T 22-04-2016 IPR006512 YidE/YbjL duplication AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 SUPERFAMILY SSF55073 219 404 8.16E-44 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 SMART SM00044 187 386 1.3E-4 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 Gene3D G3DSA:3.30.70.1230 221 405 4.9E-29 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 400 2.9E-17 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 PANTHER PTHR11920 223 409 3.4E-58 T 22-04-2016 AMK58_RS03615 2e1d119bf2b195ca6494898e17ec49a6 410 PANTHER PTHR11920:SF348 223 409 3.4E-58 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 SUPERFAMILY SSF141571 151 255 1.01E-24 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 PANTHER PTHR14136:SF0 46 244 8.4E-42 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 PANTHER PTHR14136:SF0 381 452 8.4E-42 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 228 254 8.4E-4 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 333 365 3.2E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 410 446 3.6E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 40 74 8.5E-6 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 86 125 1.2E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Pfam PF00805 Pentapeptide repeats (8 copies) 185 223 1.9E-13 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 PANTHER PTHR14136 46 244 8.4E-42 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 PANTHER PTHR14136 381 452 8.4E-42 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 SUPERFAMILY SSF141571 39 131 1.7E-22 T 22-04-2016 AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Gene3D G3DSA:3.80.10.10 19 112 3.8E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Gene3D G3DSA:3.80.10.10 242 357 3.8E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 Gene3D G3DSA:3.80.10.10 395 406 3.8E-5 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like AMK58_RS12265 fa08e0a6bb4a106a4e2fd9b66d8f65f4 454 SUPERFAMILY SSF141571 286 445 5.59E-37 T 22-04-2016 AMK58_RS10645 6acd1776201015b2ee5c1c518b3d3a77 332 PANTHER PTHR31528 1 325 2.6E-102 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK58_RS10645 6acd1776201015b2ee5c1c518b3d3a77 332 Pfam PF09084 NMT1/THI5 like 36 248 9.4E-48 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS10645 6acd1776201015b2ee5c1c518b3d3a77 332 PANTHER PTHR31528:SF3 1 325 2.6E-102 T 22-04-2016 AMK58_RS10645 6acd1776201015b2ee5c1c518b3d3a77 332 Gene3D G3DSA:3.40.190.10 115 235 4.3E-15 T 22-04-2016 AMK58_RS10645 6acd1776201015b2ee5c1c518b3d3a77 332 SUPERFAMILY SSF53850 23 249 1.58E-36 T 22-04-2016 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 1.5E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 1.5E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 1.5E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 1.5E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 Pfam PF00579 tRNA synthetases class I (W and Y) 3 270 1.8E-77 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PANTHER PTHR10055:SF10 2 332 9.7E-171 T 22-04-2016 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 Gene3D G3DSA:3.40.50.620 3 204 6.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 330 38.906 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 Gene3D G3DSA:1.10.240.10 205 297 1.8E-17 T 22-04-2016 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 SUPERFAMILY SSF52374 3 329 3.46E-93 T 22-04-2016 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 PANTHER PTHR10055 2 332 9.7E-171 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS00105 a434bc7e1fb9a531cfce0cb77c72bf2d 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 329 1.0E-96 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK58_RS17060 24a88db8e4bfdd43420d7fe3ece47a06 244 Gene3D G3DSA:2.40.10.10 142 217 2.2E-6 T 22-04-2016 AMK58_RS17060 24a88db8e4bfdd43420d7fe3ece47a06 244 Pfam PF13365 Trypsin-like peptidase domain 144 230 1.6E-7 T 22-04-2016 AMK58_RS17060 24a88db8e4bfdd43420d7fe3ece47a06 244 SUPERFAMILY SSF50494 131 231 1.18E-11 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS09245 71b3b82f628ea8fec0d3e273008d0830 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 1.4E-36 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK58_RS09245 71b3b82f628ea8fec0d3e273008d0830 317 PANTHER PTHR10366 2 298 8.2E-78 T 22-04-2016 AMK58_RS09245 71b3b82f628ea8fec0d3e273008d0830 317 PANTHER PTHR10366:SF329 2 298 8.2E-78 T 22-04-2016 AMK58_RS09245 71b3b82f628ea8fec0d3e273008d0830 317 Gene3D G3DSA:3.40.50.720 1 307 4.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09245 71b3b82f628ea8fec0d3e273008d0830 317 SUPERFAMILY SSF51735 1 314 1.59E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02645 218592e4326c4a40965a84efc8efcf8a 134 Pfam PF05099 Tellurite resistance protein TerB 5 118 5.9E-7 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK58_RS02645 218592e4326c4a40965a84efc8efcf8a 134 Gene3D G3DSA:1.10.3680.10 5 117 1.8E-7 T 22-04-2016 IPR029024 TerB-like AMK58_RS02645 218592e4326c4a40965a84efc8efcf8a 134 SUPERFAMILY SSF158682 5 120 3.4E-13 T 22-04-2016 IPR029024 TerB-like AMK58_RS02415 3e4155980470100d301cf52cfaf910de 103 Pfam PF13466 STAS domain 16 94 4.5E-9 T 22-04-2016 IPR002645 STAS domain AMK58_RS02415 3e4155980470100d301cf52cfaf910de 103 Gene3D G3DSA:3.30.750.24 8 98 2.1E-8 T 22-04-2016 IPR002645 STAS domain AMK58_RS02415 3e4155980470100d301cf52cfaf910de 103 SUPERFAMILY SSF52091 7 98 5.1E-9 T 22-04-2016 IPR002645 STAS domain AMK58_RS01200 ebd8d86c77a9e54f24a2a42051b02311 204 Gene3D G3DSA:3.40.50.150 14 191 8.5E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01200 ebd8d86c77a9e54f24a2a42051b02311 204 Pfam PF06080 Protein of unknown function (DUF938) 11 203 3.1E-71 T 22-04-2016 IPR010342 Protein of unknown function DUF938 AMK58_RS01200 ebd8d86c77a9e54f24a2a42051b02311 204 PANTHER PTHR20974 8 204 5.4E-90 T 22-04-2016 IPR010342 Protein of unknown function DUF938 AMK58_RS01200 ebd8d86c77a9e54f24a2a42051b02311 204 PANTHER PTHR20974:SF0 8 204 5.4E-90 T 22-04-2016 AMK58_RS01200 ebd8d86c77a9e54f24a2a42051b02311 204 SUPERFAMILY SSF53335 12 198 2.89E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 SUPERFAMILY SSF52540 16 124 2.09E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 Gene3D G3DSA:3.40.50.300 175 284 3.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 SUPERFAMILY SSF52540 151 406 7.45E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 SMART SM00490 188 277 6.7E-10 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 PANTHER PTHR12131 22 301 8.6E-99 T 22-04-2016 AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 Pfam PF00271 Helicase conserved C-terminal domain 179 276 1.3E-6 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 PANTHER PTHR12131:SF4 22 301 8.6E-99 T 22-04-2016 AMK58_RS01180 930824a42d8a35ad99040c436503a379 837 Gene3D G3DSA:3.40.50.300 16 123 6.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02325 9fce16038bb020b2febdab2b84d7e186 101 Gene3D G3DSA:3.30.750.24 1 99 6.2E-17 T 22-04-2016 IPR002645 STAS domain AMK58_RS02325 9fce16038bb020b2febdab2b84d7e186 101 Pfam PF01740 STAS domain 36 97 2.3E-10 T 22-04-2016 IPR002645 STAS domain AMK58_RS02325 9fce16038bb020b2febdab2b84d7e186 101 SUPERFAMILY SSF52091 1 99 2.35E-18 T 22-04-2016 IPR002645 STAS domain AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 SUPERFAMILY SSF52540 3 228 4.77E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 PANTHER PTHR24220:SF0 8 231 1.2E-96 T 22-04-2016 AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 SMART SM00382 31 210 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 Pfam PF00005 ABC transporter 23 164 6.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 Gene3D G3DSA:3.40.50.300 3 226 1.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04780 b7263d14c87aa0a86810cf570152ee17 313 PANTHER PTHR24220 8 231 1.2E-96 T 22-04-2016 AMK58_RS27195 8b5b9ec92d9060cd800403ea22c943a5 85 Gene3D G3DSA:3.30.565.10 3 82 3.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS27195 8b5b9ec92d9060cd800403ea22c943a5 85 SUPERFAMILY SSF55874 3 81 1.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS27195 8b5b9ec92d9060cd800403ea22c943a5 85 PANTHER PTHR24423 1 82 7.4E-25 T 22-04-2016 AMK58_RS27195 8b5b9ec92d9060cd800403ea22c943a5 85 PANTHER PTHR24423:SF491 1 82 7.4E-25 T 22-04-2016 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR00701 60kDa inner membrane protein signature 345 365 2.3E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR00701 60kDa inner membrane protein signature 264 279 2.3E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR00701 60kDa inner membrane protein signature 436 459 2.3E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR00701 60kDa inner membrane protein signature 92 113 2.3E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.3E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 374 572 6.3E-70 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PANTHER PTHR12428:SF14 504 577 3.4E-75 T 22-04-2016 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PANTHER PTHR12428:SF14 335 484 3.4E-75 T 22-04-2016 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PANTHER PTHR12428 504 577 3.4E-75 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PANTHER PTHR12428 335 484 3.4E-75 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR01900 YidC translocation/secretion protein signature 360 376 9.8E-22 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR01900 YidC translocation/secretion protein signature 508 523 9.8E-22 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 PRINTS PR01900 YidC translocation/secretion protein signature 527 551 9.8E-22 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 372 9.3E-96 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 Pfam PF02096 60Kd inner membrane protein 375 572 2.5E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 574 22.459 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AMK58_RS12450 49a318d35c8328c5de4b4e7cf7fb4404 579 Pfam PF14849 YidC periplasmic domain 86 363 1.8E-81 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 429 6.0E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 Pfam PF00206 Lyase 7 284 1.3E-53 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 Gene3D G3DSA:1.10.275.10 2 90 2.8E-33 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 3.6E-24 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 3.6E-24 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 3.6E-24 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.6E-24 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PANTHER PTHR11444 4 424 4.5E-150 T 22-04-2016 IPR000362 Fumarate lyase family AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 9.8E-25 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 Gene3D G3DSA:1.10.40.30 357 429 9.9E-34 T 22-04-2016 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 SMART SM00998 349 429 6.3E-37 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 SUPERFAMILY SSF48557 3 429 4.87E-133 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 5.5E-5 T 22-04-2016 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 5.5E-5 T 22-04-2016 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 5.5E-5 T 22-04-2016 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 Gene3D G3DSA:1.20.200.10 91 356 2.0E-88 T 22-04-2016 AMK58_RS11415 e6fa753cff3a86ae95c2428f2a3e8e03 431 PANTHER PTHR11444:SF2 4 424 4.5E-150 T 22-04-2016 AMK58_RS13685 aef7f1a2fa3d163492362888fbbb510a 220 SUPERFAMILY SSF89392 45 212 1.02E-25 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMK58_RS13685 aef7f1a2fa3d163492362888fbbb510a 220 PANTHER PTHR35869 13 211 7.9E-17 T 22-04-2016 AMK58_RS13685 aef7f1a2fa3d163492362888fbbb510a 220 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 55 208 4.6E-28 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMK58_RS13685 aef7f1a2fa3d163492362888fbbb510a 220 Gene3D G3DSA:2.50.20.10 45 211 3.7E-24 T 22-04-2016 AMK58_RS03610 41ad560673688c189a850102e84320bc 518 PANTHER PTHR30029:SF2 7 497 5.3E-195 T 22-04-2016 AMK58_RS03610 41ad560673688c189a850102e84320bc 518 Pfam PF04293 SpoVR like protein 17 455 7.7E-168 T 22-04-2016 IPR007390 Sporulation stage V, protein R AMK58_RS03610 41ad560673688c189a850102e84320bc 518 PANTHER PTHR30029 7 497 5.3E-195 T 22-04-2016 AMK58_RS16175 bda5614d575b741793cffc289f964351 318 SUPERFAMILY SSF110997 288 318 2.22E-6 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS16175 bda5614d575b741793cffc289f964351 318 Gene3D G3DSA:3.30.70.1070 285 318 2.1E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS16175 bda5614d575b741793cffc289f964351 318 Pfam PF05036 Sporulation related domain 288 317 2.8E-6 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 126 284 5.6E-44 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 282 2.5E-38 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 PANTHER PTHR10799 159 285 6.5E-22 T 22-04-2016 AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 PANTHER PTHR10799:SF686 159 285 6.5E-22 T 22-04-2016 AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 Gene3D G3DSA:3.30.70.270 128 286 4.8E-47 T 22-04-2016 AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 SMART SM00267 113 286 4.8E-45 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS12600 334a6ae136cafc6d55394bb1f7fccc61 304 SUPERFAMILY SSF55073 130 286 1.57E-42 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS12810 685dbdefc75869ac10b23827e1271651 175 PIRSF PIRSF032131 1 175 3.1E-43 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 AMK58_RS12810 685dbdefc75869ac10b23827e1271651 175 Pfam PF06676 Protein of unknown function (DUF1178) 1 171 4.8E-55 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 Pfam PF13353 4Fe-4S single cluster domain 98 163 5.0E-5 T 22-04-2016 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 6 319 1.3E-149 T 22-04-2016 IPR022447 Lysine-2,3-aminomutase-related AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 PANTHER PTHR30538 6 343 2.9E-110 T 22-04-2016 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 SUPERFAMILY SSF102114 82 321 2.22E-33 T 22-04-2016 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 Gene3D G3DSA:3.20.20.70 82 296 3.0E-21 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 TIGRFAM TIGR00238 TIGR00238: KamA family protein 23 310 2.7E-80 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 PIRSF PIRSF004911 1 343 2.0E-118 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 Pfam PF04055 Radical SAM superfamily 97 246 6.0E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS00800 6e7f6f7bd35cd687a57179f8d69b9fbf 344 PANTHER PTHR30538:SF1 6 343 2.9E-110 T 22-04-2016 AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 Pfam PF00072 Response regulator receiver domain 40 148 1.3E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 Pfam PF01966 HD domain 347 482 8.3E-15 T 22-04-2016 IPR006674 HD domain AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 SMART SM00471 342 492 5.4E-9 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 Gene3D G3DSA:3.40.50.2300 37 171 3.6E-13 T 22-04-2016 AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 SUPERFAMILY SSF109604 334 523 8.9E-34 T 22-04-2016 AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 SUPERFAMILY SSF52172 36 185 2.99E-13 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 Pfam PF11849 Domain of unknown function (DUF3369) 160 324 5.9E-39 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS13250 dc5a1c33fb9e7d72ac1ebd0977538826 529 Gene3D G3DSA:1.10.3210.10 336 523 1.2E-18 T 22-04-2016 IPR006674 HD domain AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 SUPERFAMILY SSF53927 2 155 2.17E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 Gene3D G3DSA:3.40.140.10 5 151 4.7E-48 T 22-04-2016 AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 PANTHER PTHR11079:SF25 1 158 2.7E-44 T 22-04-2016 AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 PANTHER PTHR11079 1 158 2.7E-44 T 22-04-2016 AMK58_RS10895 6a9553de2907154d8e1ef28034355b9a 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 103 1.2E-24 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK58_RS17895 f3841db9deefaffe740ef047ff9d92bc 230 Pfam PF12439 Glycogen debranching enzyme N terminal 2 190 4.2E-33 T 22-04-2016 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 SUPERFAMILY SSF52540 5 247 2.02E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 PANTHER PTHR24220:SF400 8 249 4.0E-132 T 22-04-2016 AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 6.4E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 Gene3D G3DSA:3.40.50.300 3 245 1.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 PANTHER PTHR24220 8 249 4.0E-132 T 22-04-2016 AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 Pfam PF00005 ABC transporter 23 178 4.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07485 8fd2d9b6e4588b79277dce5705e489c0 251 SMART SM00382 31 225 3.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 332 3.5E-136 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 SUPERFAMILY SSF51569 9 336 4.1E-137 T 22-04-2016 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PIRSF PIRSF001415 5 337 1.4E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PANTHER PTHR11458 8 336 5.0E-172 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 SMART SM01004 12 334 2.5E-224 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 132 146 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 9.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK58_RS07460 905540cc44fb9b676b0d368558225912 337 Gene3D G3DSA:3.20.20.70 11 336 3.5E-142 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 398 546 3.5E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 PANTHER PTHR18968:SF116 1 572 0.0 T 22-04-2016 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 6 568 2.6E-240 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 2.5E-43 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 SUPERFAMILY SSF52467 189 364 7.12E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 170 7.3E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Gene3D G3DSA:3.40.50.970 368 573 2.5E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 SUPERFAMILY SSF52518 2 186 1.15E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 SUPERFAMILY SSF52518 374 572 2.86E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 PANTHER PTHR18968 1 572 0.0 T 22-04-2016 AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Gene3D G3DSA:3.40.50.1220 190 367 2.7E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS05520 6e4a68d33ebba71aa5a48d0686f36214 587 Gene3D G3DSA:3.40.50.970 5 180 1.3E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PANTHER PTHR30314:SF3 10 334 1.7E-177 T 22-04-2016 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 Gene3D G3DSA:3.30.1330.20 218 322 7.1E-49 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PANTHER PTHR30314 10 334 1.7E-177 T 22-04-2016 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 5.7E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PRINTS PR00423 Cell division protein FtsZ signature 129 150 6.8E-50 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PRINTS PR00423 Cell division protein FtsZ signature 101 121 6.8E-50 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PRINTS PR00423 Cell division protein FtsZ signature 215 236 6.8E-50 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 PRINTS PR00423 Cell division protein FtsZ signature 192 214 6.8E-50 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 SUPERFAMILY SSF52490 15 211 1.06E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 SMART SM00865 210 328 3.6E-58 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 325 1.9E-121 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 SMART SM00864 16 208 1.3E-106 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 Pfam PF12327 FtsZ family, C-terminal domain 225 320 9.0E-39 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 SUPERFAMILY SSF55307 207 321 3.2E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 343 37.55 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK58_RS03890 bc5cbdc06f70f2d1d3601be66144e870 588 Gene3D G3DSA:3.40.50.1440 16 217 8.1E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Pfam PF00994 Probable molybdopterin binding domain 208 316 2.5E-10 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Gene3D G3DSA:3.40.980.10 177 325 4.4E-26 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 SUPERFAMILY SSF63882 55 189 1.22E-30 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Gene3D G3DSA:2.40.340.10 332 403 2.2E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 SUPERFAMILY SSF53218 195 325 1.83E-18 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Gene3D G3DSA:3.90.105.10 147 176 7.6E-14 T 22-04-2016 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 PANTHER PTHR10192:SF12 41 404 2.4E-50 T 22-04-2016 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 53 183 5.3E-23 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 PANTHER PTHR10192 41 404 2.4E-50 T 22-04-2016 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 SMART SM00852 185 321 1.5E-6 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 Gene3D G3DSA:2.170.190.11 79 146 4.7E-8 T 22-04-2016 AMK58_RS12690 6d49d7738534d732295b92187e5802e7 408 SUPERFAMILY SSF63867 332 404 1.16E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 SUPERFAMILY SSF140990 406 606 3.92E-75 T 22-04-2016 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Pfam PF06480 FtsH Extracellular 9 88 1.1E-9 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 9.8E-239 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 PANTHER PTHR23076 7 611 0.0 T 22-04-2016 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Pfam PF01434 Peptidase family M41 386 595 4.6E-80 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Gene3D G3DSA:3.40.50.300 147 336 3.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 1.7E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Gene3D G3DSA:1.10.8.60 337 409 1.9E-28 T 22-04-2016 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 SMART SM00382 188 327 1.2E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 608 37.673 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK58_RS06510 e165445d071c21fb5f9799cc50a11e63 645 SUPERFAMILY SSF52540 146 395 7.71E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04680 90b310956f33515f224acae5d2c165f9 297 PANTHER PTHR16222 1 291 3.6E-53 T 22-04-2016 AMK58_RS04680 90b310956f33515f224acae5d2c165f9 297 Pfam PF03747 ADP-ribosylglycohydrolase 12 267 8.3E-51 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 AMK58_RS04680 90b310956f33515f224acae5d2c165f9 297 SUPERFAMILY SSF101478 5 289 8.89E-74 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 AMK58_RS04680 90b310956f33515f224acae5d2c165f9 297 PANTHER PTHR16222:SF12 1 291 3.6E-53 T 22-04-2016 AMK58_RS04680 90b310956f33515f224acae5d2c165f9 297 TIGRFAM TIGR02662 dinitro_DRAG: ADP-ribosyl-[dinitrogen reductase] hydrolase 6 291 5.1E-156 T 22-04-2016 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 PANTHER PTHR11851:SF140 26 435 4.8E-63 T 22-04-2016 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 Gene3D G3DSA:3.30.830.10 28 235 2.2E-38 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 SUPERFAMILY SSF63411 17 246 2.33E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 Gene3D G3DSA:3.30.830.10 248 431 2.3E-32 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 PANTHER PTHR11851 26 435 4.8E-63 T 22-04-2016 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 SUPERFAMILY SSF63411 252 437 3.0E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS10995 b449b8a602b5f09f0c2298a31b01e93f 446 Pfam PF05193 Peptidase M16 inactive domain 190 365 6.3E-28 T 22-04-2016 IPR007863 Peptidase M16, C-terminal AMK58_RS02595 49a7737bc67d16e32df7ec972fbe101c 107 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-29 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AMK58_RS02595 49a7737bc67d16e32df7ec972fbe101c 107 PANTHER PTHR30561:SF1 1 103 4.6E-42 T 22-04-2016 AMK58_RS02595 49a7737bc67d16e32df7ec972fbe101c 107 PANTHER PTHR30561 1 103 4.6E-42 T 22-04-2016 AMK58_RS02595 49a7737bc67d16e32df7ec972fbe101c 107 SUPERFAMILY SSF103481 5 104 4.71E-20 T 22-04-2016 AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 Pfam PF00005 ABC transporter 31 177 2.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 SUPERFAMILY SSF52540 12 232 1.74E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 PANTHER PTHR24220 10 231 5.8E-93 T 22-04-2016 AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 PANTHER PTHR24220:SF509 10 231 5.8E-93 T 22-04-2016 AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 SMART SM00382 40 228 3.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13730 b13be6ff0068a8a974e11ea503e3b69d 244 Gene3D G3DSA:3.40.50.300 9 233 1.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05460 363b1b305474a5abf692ec184760efd0 299 PANTHER PTHR32196 1 299 1.6E-127 T 22-04-2016 AMK58_RS05460 363b1b305474a5abf692ec184760efd0 299 PANTHER PTHR32196:SF27 1 299 1.6E-127 T 22-04-2016 AMK58_RS05460 363b1b305474a5abf692ec184760efd0 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 271 1.1E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS02655 8c24d5551f589dc46f1ea7fd209bc4f1 155 Pfam PF13673 Acetyltransferase (GNAT) domain 44 128 7.7E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS02655 8c24d5551f589dc46f1ea7fd209bc4f1 155 Gene3D G3DSA:3.40.630.30 4 132 1.8E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS02655 8c24d5551f589dc46f1ea7fd209bc4f1 155 PANTHER PTHR23091:SF277 1 127 2.1E-23 T 22-04-2016 AMK58_RS02655 8c24d5551f589dc46f1ea7fd209bc4f1 155 SUPERFAMILY SSF55729 4 143 8.89E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS02655 8c24d5551f589dc46f1ea7fd209bc4f1 155 PANTHER PTHR23091 1 127 2.1E-23 T 22-04-2016 AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 SUPERFAMILY SSF52833 1 79 2.24E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 192 1.3E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 Gene3D G3DSA:1.20.1050.10 85 192 9.1E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 Gene3D G3DSA:3.40.30.10 2 84 5.2E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 PANTHER PTHR11260 2 192 1.1E-43 T 22-04-2016 AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 SUPERFAMILY SSF47616 77 192 1.64E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS06350 32b1420c68a30c2b9c187868db355ec0 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 4.7E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK58_RS09585 ac9c206f7626250f633a438c55f3d7b6 252 Gene3D G3DSA:3.40.50.150 27 156 3.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS09585 ac9c206f7626250f633a438c55f3d7b6 252 SUPERFAMILY SSF53335 13 139 2.82E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS08840 7ee06f7acde60b42786c15f4b9949df4 168 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 29 157 1.1E-43 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 AMK58_RS08840 7ee06f7acde60b42786c15f4b9949df4 168 PANTHER PTHR35146 12 164 2.5E-42 T 22-04-2016 AMK58_RS08840 7ee06f7acde60b42786c15f4b9949df4 168 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 15 159 27.949 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 AMK58_RS08840 7ee06f7acde60b42786c15f4b9949df4 168 PANTHER PTHR35146:SF1 12 164 2.5E-42 T 22-04-2016 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 725 912 3.1E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 Gene3D G3DSA:3.40.50.970 484 653 1.2E-11 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 Gene3D G3DSA:3.40.50.970 415 479 4.1E-5 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 SUPERFAMILY SSF52518 17 237 2.88E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 SUPERFAMILY SSF52922 266 395 4.19E-10 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 SUPERFAMILY SSF52518 431 618 1.18E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 SUPERFAMILY SSF53323 717 969 4.71E-31 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 PANTHER PTHR18968 359 753 5.0E-199 T 22-04-2016 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 451 600 8.4E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 Gene3D G3DSA:3.40.920.10 719 919 2.0E-18 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK58_RS05345 2fdb854c4f39d03042bb1f7d0ddbfed9 1167 PANTHER PTHR18968:SF134 359 753 5.0E-199 T 22-04-2016 AMK58_RS03065 18132ab305032f8f69efabdcdfafbfc3 267 SUPERFAMILY SSF53474 22 259 3.13E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03065 18132ab305032f8f69efabdcdfafbfc3 267 PANTHER PTHR16138 26 263 2.6E-107 T 22-04-2016 AMK58_RS03065 18132ab305032f8f69efabdcdfafbfc3 267 Gene3D G3DSA:3.40.50.1820 40 148 1.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03065 18132ab305032f8f69efabdcdfafbfc3 267 Gene3D G3DSA:3.40.50.1820 196 261 1.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03065 18132ab305032f8f69efabdcdfafbfc3 267 Pfam PF12146 Serine aminopeptidase, S33 63 150 2.9E-10 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 Gene3D G3DSA:3.30.428.10 9 134 5.8E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 SUPERFAMILY SSF54197 6 133 1.48E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 PANTHER PTHR23089 15 126 4.7E-23 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 Pfam PF01230 HIT domain 9 98 1.0E-14 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 PIRSF PIRSF000714 1 135 1.2E-49 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type AMK58_RS08445 f31bb5f5ca0c4cb04cb6cb0c02b3af90 135 PANTHER PTHR23089:SF13 15 126 4.7E-23 T 22-04-2016 AMK58_RS02260 5d056eb9b0b06d38b7f89c6668844b13 294 PANTHER PTHR32243:SF13 4 292 2.1E-104 T 22-04-2016 AMK58_RS02260 5d056eb9b0b06d38b7f89c6668844b13 294 PANTHER PTHR32243 4 292 2.1E-104 T 22-04-2016 AMK58_RS02260 5d056eb9b0b06d38b7f89c6668844b13 294 Gene3D G3DSA:1.10.3720.10 61 290 3.6E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS02260 5d056eb9b0b06d38b7f89c6668844b13 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 291 9.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS02260 5d056eb9b0b06d38b7f89c6668844b13 294 SUPERFAMILY SSF161098 55 281 1.83E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12725 1f33efb542ef6774ab350b019a4efaf8 171 Gene3D G3DSA:2.60.40.790 29 147 2.4E-16 T 22-04-2016 IPR008978 HSP20-like chaperone AMK58_RS12725 1f33efb542ef6774ab350b019a4efaf8 171 Pfam PF00011 Hsp20/alpha crystallin family 56 146 9.2E-17 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK58_RS12725 1f33efb542ef6774ab350b019a4efaf8 171 PANTHER PTHR11527:SF127 22 153 6.4E-31 T 22-04-2016 AMK58_RS12725 1f33efb542ef6774ab350b019a4efaf8 171 PANTHER PTHR11527 22 153 6.4E-31 T 22-04-2016 IPR031107 Small heat shock protein HSP20 AMK58_RS12725 1f33efb542ef6774ab350b019a4efaf8 171 SUPERFAMILY SSF49764 43 147 1.92E-19 T 22-04-2016 IPR008978 HSP20-like chaperone AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 PIRSF PIRSF016184 1 264 2.9E-55 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 Gene3D G3DSA:3.10.310.10 128 252 2.9E-45 T 22-04-2016 AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 SUPERFAMILY SSF54506 2 264 4.36E-82 T 22-04-2016 AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 PANTHER PTHR13774 2 264 8.6E-102 T 22-04-2016 AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 PANTHER PTHR13774:SF17 2 264 8.6E-102 T 22-04-2016 AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 261 1.2E-38 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 Pfam PF02567 Phenazine biosynthesis-like protein 8 260 1.4E-53 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK58_RS06035 93fc486534fb96d1b83af08cf451cc76 264 Gene3D G3DSA:3.10.310.10 3 125 9.0E-44 T 22-04-2016 AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 PANTHER PTHR23293 36 235 3.6E-61 T 22-04-2016 AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 42 211 1.4E-37 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 Gene3D G3DSA:3.40.50.620 36 207 2.5E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 SUPERFAMILY SSF52402 36 197 3.89E-43 T 22-04-2016 AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 PANTHER PTHR23293:SF5 36 235 3.6E-61 T 22-04-2016 AMK58_RS08200 6a9a30c3a69bcc2baeb202cd5fac3812 244 PIRSF PIRSF000857 8 240 5.7E-73 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 PANTHER PTHR22911 21 325 1.3E-116 T 22-04-2016 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 SUPERFAMILY SSF103481 204 297 1.83E-6 T 22-04-2016 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 PANTHER PTHR22911:SF41 21 325 1.3E-116 T 22-04-2016 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 TIGRFAM TIGR00688 rarD: protein RarD 24 273 5.3E-64 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 SUPERFAMILY SSF103481 61 159 1.83E-10 T 22-04-2016 AMK58_RS11485 37fd496ccf184ed92173eb6b818dbd3c 330 Pfam PF00892 EamA-like transporter family 21 157 5.9E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 Pfam PF02390 Putative methyltransferase 60 224 4.4E-33 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 PANTHER PTHR23417 7 232 4.3E-36 T 22-04-2016 AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 SUPERFAMILY SSF53335 58 228 4.95E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 14 233 24.678 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 Gene3D G3DSA:3.40.50.150 59 174 1.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00735 99e2a7009eeada5820099e154139c435 236 PANTHER PTHR23417:SF14 7 232 4.3E-36 T 22-04-2016 AMK58_RS18130 d1ced2aa35c035e471ceac7dab0cf9e0 136 Pfam PF00430 ATP synthase B/B' CF(0) 10 135 7.7E-26 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS18130 d1ced2aa35c035e471ceac7dab0cf9e0 136 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 136 8.479 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 PANTHER PTHR32282 55 610 2.6E-158 T 22-04-2016 AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 334 605 4.8E-29 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 SUPERFAMILY SSF56601 268 611 6.8E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 SUPERFAMILY SSF56601 218 240 6.8E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 Gene3D G3DSA:3.40.710.10 239 610 7.1E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 Gene3D G3DSA:1.10.3810.10 64 238 1.5E-58 T 22-04-2016 AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 SUPERFAMILY SSF53955 52 257 3.94E-61 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 PANTHER PTHR32282:SF5 55 610 2.6E-158 T 22-04-2016 AMK58_RS03035 9c2ed133b4acf2415e528921760a61e7 613 Pfam PF00912 Transglycosylase 63 236 2.2E-53 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK58_RS20160 51aa6b233ca3b84845596341cc471826 142 PANTHER PTHR10362 1 142 2.0E-81 T 22-04-2016 AMK58_RS20160 51aa6b233ca3b84845596341cc471826 142 SUPERFAMILY SSF48557 1 142 1.18E-59 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMK58_RS20160 51aa6b233ca3b84845596341cc471826 142 Gene3D G3DSA:1.20.200.10 1 142 7.5E-68 T 22-04-2016 AMK58_RS20160 51aa6b233ca3b84845596341cc471826 142 Pfam PF00221 Aromatic amino acid lyase 1 142 4.3E-60 T 22-04-2016 IPR001106 Aromatic amino acid lyase AMK58_RS20160 51aa6b233ca3b84845596341cc471826 142 PANTHER PTHR10362:SF7 1 142 2.0E-81 T 22-04-2016 AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 PANTHER PTHR26402 3 119 6.3E-44 T 22-04-2016 AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 PANTHER PTHR26402:SF586 3 119 6.3E-44 T 22-04-2016 AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 SMART SM00448 3 116 5.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 Gene3D G3DSA:3.40.50.2300 3 120 5.8E-39 T 22-04-2016 AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 SUPERFAMILY SSF52172 3 120 1.38E-38 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02410 2d6a61007d826d8044862c473ef1af76 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS07070 3296889f76e4f0d725c66d9e7dd32392 275 Pfam PF01774 UreD urease accessory protein 48 248 2.1E-48 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMK58_RS07070 3296889f76e4f0d725c66d9e7dd32392 275 Hamap MF_01384 Urease accessory protein UreD [ureD]. 6 259 27.464 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMK58_RS07070 3296889f76e4f0d725c66d9e7dd32392 275 PANTHER PTHR33643:SF1 3 272 3.2E-40 T 22-04-2016 AMK58_RS07070 3296889f76e4f0d725c66d9e7dd32392 275 PANTHER PTHR33643 3 272 3.2E-40 T 22-04-2016 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 Gene3D G3DSA:3.30.450.20 114 234 1.4E-7 T 22-04-2016 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PANTHER PTHR24423 98 482 1.6E-93 T 22-04-2016 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 483 6.2E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 Gene3D G3DSA:1.10.287.130 235 295 3.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 SUPERFAMILY SSF47384 227 309 1.79E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 SUPERFAMILY SSF55874 299 485 4.45E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 SMART SM00387 356 485 5.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 Gene3D G3DSA:3.30.565.10 296 487 3.3E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 1.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 1.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 1.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 1.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 SMART SM00388 243 310 1.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01025 0eca41b7c6383b5b7a60529d63e435bb 501 PANTHER PTHR24423:SF554 98 482 1.6E-93 T 22-04-2016 AMK58_RS12030 bfa9dd9c87173a78a52dc2db345dbc7d 514 Pfam PF00817 impB/mucB/samB family 29 158 6.5E-11 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS12030 bfa9dd9c87173a78a52dc2db345dbc7d 514 PANTHER PTHR35369:SF2 12 514 7.8E-107 T 22-04-2016 AMK58_RS12030 bfa9dd9c87173a78a52dc2db345dbc7d 514 PANTHER PTHR35369 12 514 7.8E-107 T 22-04-2016 AMK58_RS12030 bfa9dd9c87173a78a52dc2db345dbc7d 514 SUPERFAMILY SSF56672 11 242 7.12E-46 T 22-04-2016 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 PANTHER PTHR22981 12 288 3.9E-74 T 22-04-2016 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 12 165 4.7E-30 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 SUPERFAMILY SSF51735 10 169 2.28E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 173 217 1.0E-11 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 Gene3D G3DSA:3.40.50.720 11 169 6.8E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 Gene3D G3DSA:1.10.1040.10 227 283 2.5E-9 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 Gene3D G3DSA:1.10.1040.10 172 218 6.0E-13 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 PIRSF PIRSF000103 6 286 5.7E-41 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 SUPERFAMILY SSF48179 171 283 2.61E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS05740 e60c191d7b0196b9da4a31032c69a4ba 288 PANTHER PTHR22981:SF27 12 288 3.9E-74 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 SMART SM00283 303 557 2.2E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 SUPERFAMILY SSF58104 309 556 2.09E-63 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 SUPERFAMILY SSF58104 242 269 2.09E-63 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 556 1.3E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 4.7E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 4.7E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 4.7E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 4.7E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 SMART SM00304 214 267 2.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 187 2.1E-28 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 Gene3D G3DSA:1.10.287.950 319 525 4.4E-47 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 Pfam PF00672 HAMP domain 195 262 2.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PANTHER PTHR32089 158 249 3.1E-139 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PANTHER PTHR32089 281 560 3.1E-139 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PANTHER PTHR32089:SF40 158 249 3.1E-139 T 22-04-2016 AMK58_RS10585 8b7fbb3e41525a10d9c312b8cce0db32 563 PANTHER PTHR32089:SF40 281 560 3.1E-139 T 22-04-2016 AMK58_RS08710 8d73995dd659ebea65ecdbf6d7aed690 319 Pfam PF01728 FtsJ-like methyltransferase 164 251 2.1E-9 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMK58_RS08710 8d73995dd659ebea65ecdbf6d7aed690 319 PANTHER PTHR37524 11 314 9.1E-49 T 22-04-2016 AMK58_RS08710 8d73995dd659ebea65ecdbf6d7aed690 319 SUPERFAMILY SSF53335 164 306 1.14E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS08710 8d73995dd659ebea65ecdbf6d7aed690 319 Gene3D G3DSA:3.40.50.150 164 256 2.4E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 PANTHER PTHR11216 59 273 2.7E-14 T 22-04-2016 AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 PANTHER PTHR11216 307 331 2.7E-14 T 22-04-2016 AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 Pfam PF00350 Dynamin family 61 215 7.9E-12 T 22-04-2016 IPR022812 Dynamin superfamily AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 Gene3D G3DSA:3.40.50.300 155 241 1.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 Gene3D G3DSA:3.40.50.300 59 101 1.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 SUPERFAMILY SSF90123 342 434 2.88E-5 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 PANTHER PTHR11216:SF78 59 273 2.7E-14 T 22-04-2016 AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 PANTHER PTHR11216:SF78 307 331 2.7E-14 T 22-04-2016 AMK58_RS04210 6dae9a5fbc095142e0b41e384e23bbb9 487 SUPERFAMILY SSF52540 58 247 4.71E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11255 901165ead6fa851b89faaee9ef2761f6 322 Pfam PF05107 CRISPR-associated protein Cas7 11 307 1.1E-106 T 22-04-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C AMK58_RS11255 901165ead6fa851b89faaee9ef2761f6 322 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 12 319 3.1E-107 T 22-04-2016 IPR013418 CRISPR-associated protein Csd2 AMK58_RS11255 901165ead6fa851b89faaee9ef2761f6 322 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 9 281 3.7E-79 T 22-04-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C AMK58_RS08115 24f143a35c452e5539acf34dee7cb388 472 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 157 439 4.4E-27 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal AMK58_RS08115 24f143a35c452e5539acf34dee7cb388 472 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 15 153 1.0E-33 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMK58_RS08115 24f143a35c452e5539acf34dee7cb388 472 Gene3D G3DSA:3.40.50.720 5 167 9.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08115 24f143a35c452e5539acf34dee7cb388 472 Gene3D G3DSA:3.30.360.30 168 471 4.0E-142 T 22-04-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 Gene3D G3DSA:1.20.970.10 16 81 5.0E-27 T 22-04-2016 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 Gene3D G3DSA:3.40.1030.10 84 346 2.0E-105 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 19 343 2.1E-120 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 PANTHER PTHR11922 8 346 2.8E-109 T 22-04-2016 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 Pfam PF00591 Glycosyl transferase family, a/b domain 86 334 4.6E-102 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 SUPERFAMILY SSF47648 14 80 1.3E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 16 344 38.968 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 Pfam PF02885 Glycosyl transferase family, helical bundle domain 16 77 6.0E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 PANTHER PTHR11922:SF5 8 346 2.8E-109 T 22-04-2016 AMK58_RS06400 3239e32effec8140e08b869e0a860c14 357 SUPERFAMILY SSF52418 84 347 4.45E-93 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS00955 b40b26c6d73007f083d7bb1093244168 138 Gene3D G3DSA:3.10.129.10 10 137 4.2E-34 T 22-04-2016 IPR029069 HotDog domain AMK58_RS00955 b40b26c6d73007f083d7bb1093244168 138 PANTHER PTHR31793 18 138 7.6E-24 T 22-04-2016 AMK58_RS00955 b40b26c6d73007f083d7bb1093244168 138 SUPERFAMILY SSF54637 12 137 1.28E-29 T 22-04-2016 IPR029069 HotDog domain AMK58_RS00955 b40b26c6d73007f083d7bb1093244168 138 PANTHER PTHR31793:SF1 18 138 7.6E-24 T 22-04-2016 AMK58_RS00955 b40b26c6d73007f083d7bb1093244168 138 Pfam PF13279 Thioesterase-like superfamily 18 133 1.7E-10 T 22-04-2016 AMK58_RS04260 f8667a54131cb6f4ef9fd134bc6a1a5b 108 PANTHER PTHR33473 19 108 3.6E-38 T 22-04-2016 AMK58_RS04260 f8667a54131cb6f4ef9fd134bc6a1a5b 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 103 29.144 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMK58_RS04260 f8667a54131cb6f4ef9fd134bc6a1a5b 108 SUPERFAMILY SSF54736 23 107 3.35E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK58_RS04260 f8667a54131cb6f4ef9fd134bc6a1a5b 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 104 4.0E-36 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 AMK58_RS04260 f8667a54131cb6f4ef9fd134bc6a1a5b 108 Gene3D G3DSA:3.30.1390.10 9 108 2.2E-46 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 Pfam PF01926 50S ribosome-binding GTPase 47 165 3.9E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 PANTHER PTHR11649 9 217 1.5E-61 T 22-04-2016 AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 33 217 27.841 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 47 209 6.3E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 SUPERFAMILY SSF52540 28 216 2.94E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 Gene3D G3DSA:3.40.50.300 31 217 8.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12455 549f1c6dbea95a639ac8ba17209058bb 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 29 213 3.4E-67 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 PANTHER PTHR33121:SF10 36 313 9.9E-44 T 22-04-2016 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 Gene3D G3DSA:3.30.70.270 437 540 2.5E-20 T 22-04-2016 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 SMART SM00052 21 273 5.6E-34 T 22-04-2016 IPR001633 EAL domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 537 1.4E-15 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 SUPERFAMILY SSF54631 326 425 1.07E-6 T 22-04-2016 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 PANTHER PTHR33121 36 313 9.9E-44 T 22-04-2016 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 Gene3D G3DSA:3.20.20.450 36 268 3.4E-50 T 22-04-2016 IPR001633 EAL domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 539 7.5E-13 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 SUPERFAMILY SSF141868 36 268 5.75E-52 T 22-04-2016 IPR001633 EAL domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 Pfam PF00563 EAL domain 36 268 7.8E-46 T 22-04-2016 IPR001633 EAL domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 Gene3D G3DSA:3.10.580.10 329 427 2.8E-5 T 22-04-2016 AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 SMART SM00267 423 581 1.5E-9 T 22-04-2016 IPR000160 GGDEF domain AMK58_RS13075 e0009fa3016c6d988da371e18e3e20eb 631 SUPERFAMILY SSF55073 439 540 1.18E-18 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 PANTHER PTHR30024:SF12 18 329 1.2E-48 T 22-04-2016 AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 Gene3D G3DSA:3.40.190.10 126 257 1.3E-28 T 22-04-2016 AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 PANTHER PTHR30024 18 329 1.2E-48 T 22-04-2016 AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 Pfam PF16868 NMT1-like family 27 327 1.2E-101 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 Gene3D G3DSA:3.40.190.10 24 116 6.2E-45 T 22-04-2016 AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 Gene3D G3DSA:3.40.190.10 258 328 6.2E-45 T 22-04-2016 AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 17 327 5.9E-84 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family AMK58_RS12015 6a3f442470e31187a9a03dca71f6be7d 342 SUPERFAMILY SSF53850 25 328 3.42E-65 T 22-04-2016 AMK58_RS03200 76894a1504adfdbdf8d48b858f67a0db 342 PANTHER PTHR30482:SF10 29 327 4.5E-76 T 22-04-2016 AMK58_RS03200 76894a1504adfdbdf8d48b858f67a0db 342 PANTHER PTHR30482 29 327 4.5E-76 T 22-04-2016 AMK58_RS03200 76894a1504adfdbdf8d48b858f67a0db 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 314 4.2E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS14760 6a033f39294b44029c8469ca2af2300d 149 PANTHER PTHR24220 1 149 1.5E-72 T 22-04-2016 AMK58_RS14760 6a033f39294b44029c8469ca2af2300d 149 Pfam PF00005 ABC transporter 1 148 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS14760 6a033f39294b44029c8469ca2af2300d 149 SUPERFAMILY SSF52540 1 149 2.02E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS14760 6a033f39294b44029c8469ca2af2300d 149 Gene3D G3DSA:3.40.50.300 1 149 9.6E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS14760 6a033f39294b44029c8469ca2af2300d 149 PANTHER PTHR24220:SF585 1 149 1.5E-72 T 22-04-2016 AMK58_RS23875 e8db441149ddc7acc1d73fc7d9da43f3 117 SUPERFAMILY SSF56059 2 116 2.45E-35 T 22-04-2016 AMK58_RS23875 e8db441149ddc7acc1d73fc7d9da43f3 117 Gene3D G3DSA:3.30.470.20 70 117 1.8E-19 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS23875 e8db441149ddc7acc1d73fc7d9da43f3 117 Pfam PF08442 ATP-grasp domain 2 117 8.9E-42 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS23875 e8db441149ddc7acc1d73fc7d9da43f3 117 Gene3D G3DSA:3.30.1490.20 2 69 4.4E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS23875 e8db441149ddc7acc1d73fc7d9da43f3 117 PANTHER PTHR11815 1 117 5.3E-50 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS04870 f445c94d51bba87f9c309ee99164da91 331 Pfam PF04577 Protein of unknown function (DUF563) 100 300 4.1E-35 T 22-04-2016 IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 AMK58_RS04870 f445c94d51bba87f9c309ee99164da91 331 PANTHER PTHR20961 201 296 2.4E-22 T 22-04-2016 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PIRSF PIRSF002133 1 123 2.4E-55 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.9E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 PANTHER PTHR11652 1 116 9.2E-79 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.821 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 Gene3D G3DSA:2.40.50.140 1 123 1.8E-67 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 SUPERFAMILY SSF50249 2 123 7.54E-54 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 Pfam PF00164 Ribosomal protein S12/S23 4 123 1.0E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.6E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK58_RS10430 71e866f556d1ad395b7cb842a48cd628 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.4E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 PIRSF PIRSF002122 2 156 6.6E-60 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 Gene3D G3DSA:1.10.455.10 7 156 4.1E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.9E-69 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.843 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 SUPERFAMILY SSF47973 1 149 4.45E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK58_RS10425 70cde996285bc862d9a2a68198f54d96 156 PANTHER PTHR11205 1 156 1.5E-87 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK58_RS04275 360484982c05fd3bc65037ab4ff68746 253 Pfam PF00227 Proteasome subunit 4 179 1.6E-7 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AMK58_RS04275 360484982c05fd3bc65037ab4ff68746 253 PIRSF PIRSF009120 1 243 1.2E-57 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AMK58_RS04275 360484982c05fd3bc65037ab4ff68746 253 Gene3D G3DSA:3.60.20.10 1 196 3.9E-12 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS04275 360484982c05fd3bc65037ab4ff68746 253 SUPERFAMILY SSF56235 2 231 2.79E-21 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS05540 27e96c1fe370f7eff497fc9602cb47af 180 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 3 168 5.4E-63 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria AMK58_RS05540 27e96c1fe370f7eff497fc9602cb47af 180 PANTHER PTHR38596 3 171 2.1E-69 T 22-04-2016 AMK58_RS05540 27e96c1fe370f7eff497fc9602cb47af 180 Pfam PF03350 Uncharacterized protein family, UPF0114 10 126 2.5E-39 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 AMK58_RS05540 27e96c1fe370f7eff497fc9602cb47af 180 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 168 84.394 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 AMK58_RS05540 27e96c1fe370f7eff497fc9602cb47af 180 PANTHER PTHR38596:SF1 3 171 2.1E-69 T 22-04-2016 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 PANTHER PTHR11063:SF8 18 425 3.2E-173 T 22-04-2016 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 PIRSF PIRSF000151 7 426 6.9E-171 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 Gene3D G3DSA:3.40.605.10 384 425 7.2E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 Gene3D G3DSA:3.40.605.10 7 233 7.2E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 Gene3D G3DSA:3.40.309.10 235 383 6.1E-40 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 PANTHER PTHR11063 18 425 3.2E-173 T 22-04-2016 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 Pfam PF00171 Aldehyde dehydrogenase family 8 289 9.9E-19 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 SUPERFAMILY SSF53720 14 425 1.7E-118 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 14 425 40.461 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 353 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11710 15c4d1a208efcf7e85f59958c8e42ae9 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 22 415 9.1E-140 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS06580 b4ce6fbf8c95069e5607cea6ce1afbfc 93 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 9 81 1.7E-22 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 PANTHER PTHR11601:SF20 3 354 1.4E-115 T 22-04-2016 AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 Pfam PF00266 Aminotransferase class-V 4 353 3.9E-59 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 SUPERFAMILY SSF53383 3 356 1.84E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 PANTHER PTHR11601 3 354 1.4E-115 T 22-04-2016 AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 Gene3D G3DSA:3.90.1150.10 237 357 3.2E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 PIRSF PIRSF005572 1 367 1.8E-112 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK58_RS04915 d035d227c44285a35e8ee59d6ad36f95 370 Gene3D G3DSA:3.40.640.10 16 236 2.0E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 SUPERFAMILY SSF63411 2 206 1.26E-57 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 Gene3D G3DSA:3.30.830.10 12 221 2.7E-56 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 Gene3D G3DSA:3.30.830.10 222 412 7.5E-67 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 SUPERFAMILY SSF63411 224 413 2.55E-50 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 PANTHER PTHR11851 3 417 6.6E-146 T 22-04-2016 AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 Pfam PF00675 Insulinase (Peptidase family M16) 13 159 3.4E-42 T 22-04-2016 IPR011765 Peptidase M16, N-terminal AMK58_RS09490 1f2a6f36567bd809b0c5f306ccc1ad5e 418 Pfam PF05193 Peptidase M16 inactive domain 167 338 1.8E-38 T 22-04-2016 IPR007863 Peptidase M16, C-terminal AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 Pfam PF00672 HAMP domain 118 188 1.6E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 SMART SM00304 139 192 3.9E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 PANTHER PTHR32089 59 174 1.8E-24 T 22-04-2016 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 PANTHER PTHR32089:SF40 206 269 1.8E-24 T 22-04-2016 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 SUPERFAMILY SSF158472 140 186 1.83E-10 T 22-04-2016 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 PANTHER PTHR32089:SF40 59 174 1.8E-24 T 22-04-2016 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 PANTHER PTHR32089 206 269 1.8E-24 T 22-04-2016 AMK58_RS22790 d1d77df726f61b9f5904b8d27decb7ef 269 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 112 2.0E-7 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.6E-73 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 SUPERFAMILY SSF56059 124 311 4.12E-56 T 22-04-2016 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 156.709 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 PANTHER PTHR21621 1 316 8.0E-120 T 22-04-2016 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Gene3D G3DSA:3.40.50.20 3 130 9.7E-53 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Gene3D G3DSA:3.30.1490.20 137 191 9.8E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 310 2.4E-125 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 120 3.2E-44 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 PANTHER PTHR21621:SF4 1 316 8.0E-120 T 22-04-2016 AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 SUPERFAMILY SSF52440 3 122 6.91E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK58_RS13825 9f4c4cea316753517601bbc9e0eef71a 318 Gene3D G3DSA:3.30.470.20 192 297 8.7E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 PANTHER PTHR30055 18 185 1.1E-24 T 22-04-2016 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 1.3E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 Gene3D G3DSA:1.10.357.10 20 216 5.6E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 SUPERFAMILY SSF48498 96 214 1.64E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS11490 76fa0fa64d95953355966a42bc20d826 219 SUPERFAMILY SSF46689 22 86 4.31E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS04295 9ac28fa16e51412a492b67cf0dcb43ed 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 225 1.6E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS04295 9ac28fa16e51412a492b67cf0dcb43ed 231 PANTHER PTHR30183 7 227 7.6E-82 T 22-04-2016 AMK58_RS04295 9ac28fa16e51412a492b67cf0dcb43ed 231 Gene3D G3DSA:1.10.3720.10 20 220 4.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS04295 9ac28fa16e51412a492b67cf0dcb43ed 231 SUPERFAMILY SSF161098 15 223 2.49E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS04295 9ac28fa16e51412a492b67cf0dcb43ed 231 PANTHER PTHR30183:SF4 7 227 7.6E-82 T 22-04-2016 AMK58_RS22740 d1db88790a3ac6f04012f8fe70320e77 216 Gene3D G3DSA:1.10.3430.10 36 216 6.3E-68 T 22-04-2016 IPR029020 Ammonium/urea transporter AMK58_RS22740 d1db88790a3ac6f04012f8fe70320e77 216 Pfam PF00909 Ammonium Transporter Family 44 216 1.3E-45 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK58_RS22740 d1db88790a3ac6f04012f8fe70320e77 216 SUPERFAMILY SSF111352 38 216 6.02E-62 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK58_RS22740 d1db88790a3ac6f04012f8fe70320e77 216 PANTHER PTHR11730 14 216 2.8E-86 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMK58_RS22740 d1db88790a3ac6f04012f8fe70320e77 216 PANTHER PTHR11730:SF17 14 216 2.8E-86 T 22-04-2016 AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.5E-112 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 Pfam PF08543 Phosphomethylpyrimidine kinase 92 260 1.0E-15 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 285 51.84 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 Gene3D G3DSA:3.40.1190.20 1 283 9.8E-91 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 PANTHER PTHR10534 1 286 1.2E-108 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK58_RS02525 200b36f3db3de58e44894104c9908c26 286 SUPERFAMILY SSF53613 1 273 2.18E-73 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 Pfam PF03050 Transposase IS66 family 197 489 6.1E-100 T 22-04-2016 IPR004291 Transposase, IS66 AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 PANTHER PTHR33678:SF1 53 532 1.4E-111 T 22-04-2016 AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 PANTHER PTHR33678 53 532 1.4E-111 T 22-04-2016 AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 140 183 6.6E-16 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 Pfam PF13817 IS66 C-terminal element 496 533 1.8E-18 T 22-04-2016 AMK58_RS13415 dfb6c923f10a40e647274c812239df30 548 Pfam PF13007 Transposase C of IS166 homeodomain 56 130 3.5E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 Pfam PF00849 RNA pseudouridylate synthase 4 149 3.7E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 PANTHER PTHR21600 123 178 7.0E-83 T 22-04-2016 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 PANTHER PTHR21600 2 105 7.0E-83 T 22-04-2016 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 SUPERFAMILY SSF55120 3 181 8.8E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 PANTHER PTHR21600:SF23 2 105 7.0E-83 T 22-04-2016 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 PANTHER PTHR21600:SF23 123 178 7.0E-83 T 22-04-2016 AMK58_RS11975 cca42d9f4561b014e72a050748f609e0 212 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 178 1.9E-56 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 PANTHER PTHR34353 7 347 5.2E-96 T 22-04-2016 AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 7 344 23.005 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 Pfam PF01867 CRISPR associated protein Cas1 8 302 2.6E-104 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 346 3.8E-156 T 22-04-2016 IPR019856 CRISPR-associated protein Cas1, DVULG subtype AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 PANTHER PTHR34353:SF2 7 347 5.2E-96 T 22-04-2016 AMK58_RS11245 d8e52e80e417cd8383ac603d784dbc5b 347 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 339 2.9E-82 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 SMART SM00382 58 334 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Gene3D G3DSA:3.40.50.300 246 333 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Gene3D G3DSA:3.40.50.300 15 119 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 SUPERFAMILY SSF52540 15 441 2.68E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 SMART SM01086 337 431 2.7E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Gene3D G3DSA:1.10.8.10 120 175 7.3E-25 T 22-04-2016 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Gene3D G3DSA:1.10.8.10 214 244 7.3E-25 T 22-04-2016 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Gene3D G3DSA:1.10.8.60 337 445 4.0E-36 T 22-04-2016 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 14 445 2.0E-186 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 PANTHER PTHR11262 219 445 9.7E-207 T 22-04-2016 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 PANTHER PTHR11262 13 114 9.7E-207 T 22-04-2016 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 111 2.0E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 337 407 1.3E-7 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 10 445 42.121 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 Pfam PF07724 AAA domain (Cdc48 subfamily) 200 331 2.4E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 PANTHER PTHR11262:SF3 219 445 9.7E-207 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK58_RS00525 3a2e0aef4c022b8fca952f810a810131 445 PANTHER PTHR11262:SF3 13 114 9.7E-207 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 SMART SM00062 40 280 0.0014 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 129 277 9.5E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 86 6.9E-10 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 Gene3D G3DSA:3.40.190.10 153 222 0.001 T 22-04-2016 AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 SUPERFAMILY SSF53850 32 275 4.85E-26 T 22-04-2016 AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 Gene3D G3DSA:3.40.190.10 239 277 8.7E-13 T 22-04-2016 AMK58_RS03500 7f4c9702f2cb010c59cb79abe001a6bc 286 Gene3D G3DSA:3.40.190.10 38 138 8.7E-13 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 Gene3D G3DSA:1.10.287.950 321 524 1.9E-44 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 Gene3D G3DSA:3.30.450.20 25 180 2.0E-37 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 551 8.1E-30 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 Pfam PF17200 Single Cache domain 2 40 188 9.3E-33 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 Pfam PF00672 HAMP domain 193 259 1.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 358 1.4E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 1.4E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 1.4E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PANTHER PTHR32089 279 558 3.5E-129 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PANTHER PTHR32089 157 246 3.5E-129 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 SMART SM01049 34 127 2.2E-24 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PANTHER PTHR32089:SF40 279 558 3.5E-129 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 PANTHER PTHR32089:SF40 157 246 3.5E-129 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 SMART SM00304 211 264 5.5E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 SMART SM00283 301 555 1.4E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 SUPERFAMILY SSF58104 307 554 1.1E-59 T 22-04-2016 AMK58_RS06645 fccb56b574b10cfe0f71d898524703cc 561 SUPERFAMILY SSF58104 239 266 1.1E-59 T 22-04-2016 AMK58_RS09195 39b3bedb48d9db5405e792960629093e 139 SUPERFAMILY SSF82784 1 137 5.5E-43 T 22-04-2016 IPR003718 OsmC/Ohr family AMK58_RS09195 39b3bedb48d9db5405e792960629093e 139 Gene3D G3DSA:3.30.300.20 39 136 1.7E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS09195 39b3bedb48d9db5405e792960629093e 139 Gene3D G3DSA:2.20.25.10 1 34 1.9E-20 T 22-04-2016 AMK58_RS09195 39b3bedb48d9db5405e792960629093e 139 Pfam PF02566 OsmC-like protein 34 130 3.0E-17 T 22-04-2016 IPR003718 OsmC/Ohr family AMK58_RS09195 39b3bedb48d9db5405e792960629093e 139 PANTHER PTHR34352 1 139 1.5E-55 T 22-04-2016 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 SMART SM00892 55 245 2.2E-43 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 SUPERFAMILY SSF54060 30 253 1.88E-63 T 22-04-2016 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 Pfam PF01223 DNA/RNA non-specific endonuclease 43 244 7.7E-46 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 117 125 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 PANTHER PTHR13966 54 255 1.2E-41 T 22-04-2016 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 SMART SM00477 56 245 1.9E-37 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AMK58_RS02755 08ec3eb260f483e2e7f202a30450c8ec 262 Gene3D G3DSA:3.40.570.10 29 249 8.2E-61 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AMK58_RS04615 7fd97f8a829e40511c8cf96703762eed 68 Gene3D G3DSA:1.10.287.660 1 65 2.7E-29 T 22-04-2016 IPR029012 Helix hairpin bin domain AMK58_RS04615 7fd97f8a829e40511c8cf96703762eed 68 PIRSF PIRSF037676 1 67 1.9E-26 T 22-04-2016 IPR007774 Putative nitrogen fixation protein AMK58_RS04615 7fd97f8a829e40511c8cf96703762eed 68 Pfam PF05082 Rop-like 2 64 7.6E-30 T 22-04-2016 IPR007774 Putative nitrogen fixation protein AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 SMART SM00448 1 112 6.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 PANTHER PTHR26402:SF578 1 224 1.5E-99 T 22-04-2016 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 SUPERFAMILY SSF52172 1 180 2.57E-39 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 SMART SM00862 146 221 1.2E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 PANTHER PTHR26402 1 224 1.5E-99 T 22-04-2016 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 Gene3D G3DSA:1.10.10.10 123 224 3.8E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 Pfam PF00072 Response regulator receiver domain 3 113 5.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 4.0E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK58_RS09750 5fcf8bf8f09136391a94fdc5aa7ac03c 225 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-37 T 22-04-2016 AMK58_RS13660 d060f11f5d3ca41b78be3ad883a6b2f0 210 Pfam PF08722 TnsA endonuclease N terminal 44 121 1.5E-16 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 Gene3D G3DSA:1.25.40.10 35 227 1.7E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 5 237 44.316 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 SUPERFAMILY SSF48452 53 228 6.11E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 242 6.7E-90 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 Pfam PF13525 Outer membrane lipoprotein 33 229 1.3E-56 T 22-04-2016 AMK58_RS03850 9d2bb8f1b09d42bf259809201518f4b2 272 PANTHER PTHR37423 10 268 3.1E-72 T 22-04-2016 AMK58_RS20135 0ba77df58a8e5b7c05b1a36929b037d8 145 Pfam PF01434 Peptidase family M41 2 144 2.2E-55 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK58_RS20135 0ba77df58a8e5b7c05b1a36929b037d8 145 PANTHER PTHR23076 1 144 1.1E-66 T 22-04-2016 AMK58_RS20135 0ba77df58a8e5b7c05b1a36929b037d8 145 PANTHER PTHR23076:SF37 1 144 1.1E-66 T 22-04-2016 AMK58_RS20135 0ba77df58a8e5b7c05b1a36929b037d8 145 SUPERFAMILY SSF140990 7 144 3.53E-54 T 22-04-2016 AMK58_RS13355 5d2267ce17fe65ea21b406cbe0aa0465 248 PANTHER PTHR35005:SF1 1 241 5.3E-47 T 22-04-2016 AMK58_RS13355 5d2267ce17fe65ea21b406cbe0aa0465 248 SUPERFAMILY SSF102215 2 244 8.24E-70 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK58_RS13355 5d2267ce17fe65ea21b406cbe0aa0465 248 Pfam PF02633 Creatinine amidohydrolase 7 238 7.1E-59 T 22-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK58_RS13355 5d2267ce17fe65ea21b406cbe0aa0465 248 PANTHER PTHR35005 1 241 5.3E-47 T 22-04-2016 AMK58_RS13355 5d2267ce17fe65ea21b406cbe0aa0465 248 Gene3D G3DSA:3.40.50.10310 4 245 8.7E-74 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 SUPERFAMILY SSF48452 58 183 3.8E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 Pfam PF13432 Tetratricopeptide repeat 109 169 3.6E-7 T 22-04-2016 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 SMART SM00028 104 137 9.8E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 SMART SM00028 70 103 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 SMART SM00028 138 171 0.042 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 PANTHER PTHR23083 68 185 2.7E-15 T 22-04-2016 AMK58_RS09760 aeb61c9803ad3281b02fffd2a2f43022 190 Gene3D G3DSA:1.25.40.10 65 182 4.8E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 Gene3D G3DSA:1.10.443.10 226 389 1.2E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 PANTHER PTHR30349 108 391 1.4E-22 T 22-04-2016 AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 SUPERFAMILY SSF56349 108 389 7.95E-41 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 Pfam PF00589 Phage integrase family 226 378 1.0E-13 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 Gene3D G3DSA:1.10.150.130 108 195 8.7E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS06855 b9abc830c3a942156be37b9ebfa2e7bb 411 PANTHER PTHR30349:SF20 108 391 1.4E-22 T 22-04-2016 AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 SUPERFAMILY SSF51735 2 239 2.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PANTHER PTHR24322 11 139 5.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PANTHER PTHR24322 155 188 5.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.0E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 Gene3D G3DSA:3.40.50.720 1 239 7.8E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 Pfam PF00106 short chain dehydrogenase 8 193 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS03430 fc8fb93a9b1c826555092cc47fce4401 327 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.006 T 22-04-2016 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 PANTHER PTHR32089:SF40 4 235 4.3E-94 T 22-04-2016 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 Gene3D G3DSA:1.10.287.950 6 200 3.4E-43 T 22-04-2016 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 105 134 2.7E-9 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 35 2.7E-9 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 SUPERFAMILY SSF58104 6 231 1.57E-54 T 22-04-2016 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 PANTHER PTHR32089 4 235 4.3E-94 T 22-04-2016 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 Gene3D G3DSA:1.20.120.50 255 335 1.7E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 258 336 1.3E-19 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 SUPERFAMILY SSF47188 254 336 4.19E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 SMART SM00283 2 232 1.1E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 55 231 1.5E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS18155 bd203a8f4902271bb4321dd0c90f3c49 336 ProSitePatterns PS00550 Hemerythrin family signature. 310 333 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS07025 3f3546bb7b692301ea6c63e0e184b259 76 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 44 3.0E-14 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMK58_RS07025 3f3546bb7b692301ea6c63e0e184b259 76 SMART SM00834 1 40 4.0E-14 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMK58_RS07025 3f3546bb7b692301ea6c63e0e184b259 76 Pfam PF09723 Zinc ribbon domain 1 38 5.7E-14 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMK58_RS06455 5a42f3f86e58a5654fa84c401f2d60a3 232 PANTHER PTHR17630 1 231 1.6E-50 T 22-04-2016 AMK58_RS06455 5a42f3f86e58a5654fa84c401f2d60a3 232 SUPERFAMILY SSF53474 2 232 5.08E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06455 5a42f3f86e58a5654fa84c401f2d60a3 232 Pfam PF01738 Dienelactone hydrolase family 14 230 1.1E-53 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK58_RS06455 5a42f3f86e58a5654fa84c401f2d60a3 232 Gene3D G3DSA:3.40.50.1820 2 232 6.3E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 PANTHER PTHR13680:SF22 2 80 1.5E-27 T 22-04-2016 AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 PANTHER PTHR13680 2 80 1.5E-27 T 22-04-2016 AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 59 77 2.1E-6 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 Pfam PF09360 Iron-binding zinc finger CDGSH type 17 41 1.2E-10 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 SMART SM00704 50 79 0.12 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMK58_RS09435 9889975b7037ceb66891d5d2eb00b971 81 SMART SM00704 10 47 2.3E-14 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMK58_RS09445 0d8f54cbc0f0dcdd87bffd351bc226ab 325 PANTHER PTHR30426 6 325 6.4E-145 T 22-04-2016 AMK58_RS09445 0d8f54cbc0f0dcdd87bffd351bc226ab 325 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 7 287 1.7E-99 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK58_RS09445 0d8f54cbc0f0dcdd87bffd351bc226ab 325 Pfam PF02401 LytB protein 8 285 7.1E-89 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK58_RS09445 0d8f54cbc0f0dcdd87bffd351bc226ab 325 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 6 290 37.027 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK58_RS07545 43ccddb062a5c4e035c0c57810da9254 104 PANTHER PTHR30388:SF4 2 104 2.0E-35 T 22-04-2016 AMK58_RS07545 43ccddb062a5c4e035c0c57810da9254 104 PANTHER PTHR30388 2 104 2.0E-35 T 22-04-2016 AMK58_RS07545 43ccddb062a5c4e035c0c57810da9254 104 Pfam PF02625 XdhC and CoxI family 12 79 2.3E-28 T 22-04-2016 IPR003777 XdhC- CoxI AMK58_RS02105 f2c19b24b6ca9616f040a044e400ed4e 550 Pfam PF16889 Heparinase II/III N-terminus 124 294 1.8E-6 T 22-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 AMK58_RS02105 f2c19b24b6ca9616f040a044e400ed4e 550 Pfam PF07940 Heparinase II/III-like protein 303 535 2.2E-63 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 AMK58_RS07695 f771705f53c8dbd03f32c25a0db347a0 144 PANTHER PTHR23091 5 127 5.9E-20 T 22-04-2016 AMK58_RS07695 f771705f53c8dbd03f32c25a0db347a0 144 Pfam PF00583 Acetyltransferase (GNAT) family 66 127 4.8E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS07695 f771705f53c8dbd03f32c25a0db347a0 144 Gene3D G3DSA:3.40.630.30 5 127 1.7E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07695 f771705f53c8dbd03f32c25a0db347a0 144 SUPERFAMILY SSF55729 3 140 1.89E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS04160 57f7cdac522dd9af061ade6585f17423 442 SUPERFAMILY SSF88713 219 402 1.18E-56 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS04160 57f7cdac522dd9af061ade6585f17423 442 Gene3D G3DSA:3.20.20.370 219 403 2.2E-57 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS04160 57f7cdac522dd9af061ade6585f17423 442 PANTHER PTHR10587 219 399 4.7E-48 T 22-04-2016 AMK58_RS04160 57f7cdac522dd9af061ade6585f17423 442 Pfam PF01522 Polysaccharide deacetylase 220 330 2.7E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 PANTHER PTHR11228:SF7 3 363 1.5E-31 T 22-04-2016 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 Pfam PF13394 4Fe-4S single cluster domain 14 128 1.0E-7 T 22-04-2016 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 Pfam PF04055 Radical SAM superfamily 12 162 3.2E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 492 697 5.7E-31 T 22-04-2016 IPR026337 HEXXH motif domain AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 PANTHER PTHR11228 3 363 1.5E-31 T 22-04-2016 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 13 24 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 SUPERFAMILY SSF102114 8 335 6.02E-29 T 22-04-2016 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 Gene3D G3DSA:3.20.20.70 6 344 1.4E-34 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS13540 4c47cb54228448b0263337567b14934b 706 TIGRFAM TIGR04269 SAM_SPASM_FxsB: radical SAM/SPASM domain protein, FxsB family 6 364 1.7E-145 T 22-04-2016 IPR026335 Radical SAM/SPASM domain, FxsB family AMK58_RS02330 37152a8417bce74c4d6a29627caff964 260 SUPERFAMILY SSF55874 191 247 2.88E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02330 37152a8417bce74c4d6a29627caff964 260 SUPERFAMILY SSF55874 138 158 2.88E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02330 37152a8417bce74c4d6a29627caff964 260 Gene3D G3DSA:3.30.565.10 131 249 2.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02330 37152a8417bce74c4d6a29627caff964 260 Pfam PF13581 Histidine kinase-like ATPase domain 123 257 9.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS04000 8440e3ca3521f0a2fedaa573be5c39ae 184 Pfam PF00583 Acetyltransferase (GNAT) family 59 134 1.3E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS04000 8440e3ca3521f0a2fedaa573be5c39ae 184 Gene3D G3DSA:3.40.630.30 4 138 8.1E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS04000 8440e3ca3521f0a2fedaa573be5c39ae 184 SUPERFAMILY SSF55729 4 139 9.19E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 Gene3D G3DSA:2.60.300.12 1 96 8.7E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.5E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 PANTHER PTHR10072 1 106 3.3E-34 T 22-04-2016 AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 103 4.2E-24 T 22-04-2016 IPR000361 FeS cluster biogenesis AMK58_RS04595 e23e8bc3a3d97a105eefaa9f9d59b612 126 SUPERFAMILY SSF89360 1 96 1.59E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis AMK58_RS08345 5d287b32aac5092f4e54b220c9b988e3 147 Pfam PF05443 ROS/MUCR transcriptional regulator protein 14 135 2.7E-49 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMK58_RS10705 d57858125563f5ee857fa2cd33fdd193 102 PANTHER PTHR30163:SF2 12 93 4.7E-12 T 22-04-2016 AMK58_RS10705 d57858125563f5ee857fa2cd33fdd193 102 PANTHER PTHR30163 12 93 4.7E-12 T 22-04-2016 IPR011757 Lytic transglycosylase MltB AMK58_RS10705 d57858125563f5ee857fa2cd33fdd193 102 Pfam PF01471 Putative peptidoglycan binding domain 37 87 4.7E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS10705 d57858125563f5ee857fa2cd33fdd193 102 Gene3D G3DSA:1.10.101.10 25 90 1.4E-14 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS10705 d57858125563f5ee857fa2cd33fdd193 102 SUPERFAMILY SSF47090 27 91 7.06E-16 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS13475 7147c0dc4beabfca4e27439b9aa88f42 181 PANTHER PTHR30050 4 142 4.1E-47 T 22-04-2016 AMK58_RS13475 7147c0dc4beabfca4e27439b9aa88f42 181 SUPERFAMILY SSF52540 8 124 1.47E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13475 7147c0dc4beabfca4e27439b9aa88f42 181 SMART SM00382 1 134 0.0018 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13475 7147c0dc4beabfca4e27439b9aa88f42 181 Pfam PF01695 IstB-like ATP binding protein 8 131 2.5E-43 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 AMK58_RS13475 7147c0dc4beabfca4e27439b9aa88f42 181 Gene3D G3DSA:3.40.50.300 8 130 1.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 146 0.0098 T 22-04-2016 AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 SUPERFAMILY SSF51735 2 318 1.26E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 Gene3D G3DSA:3.90.25.10 190 324 2.8E-28 T 22-04-2016 AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 250 2.6E-48 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 Gene3D G3DSA:3.40.50.720 3 189 4.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS12380 df7b9d510d485be0ac601617a501e6ec 332 PANTHER PTHR10366 4 319 4.6E-77 T 22-04-2016 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 Gene3D G3DSA:3.40.50.2000 2 245 1.5E-70 T 22-04-2016 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 PANTHER PTHR10788:SF6 1 462 5.4E-192 T 22-04-2016 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 PANTHER PTHR10788 1 462 5.4E-192 T 22-04-2016 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 SUPERFAMILY SSF53756 2 461 4.5E-148 T 22-04-2016 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 Pfam PF00982 Glycosyltransferase family 20 18 460 5.5E-137 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 460 2.0E-180 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 AMK58_RS04490 41cbf9717ddb2d8e2d06344766eb50dd 465 Gene3D G3DSA:3.40.50.2000 246 444 4.4E-78 T 22-04-2016 AMK58_RS06815 e895d93ceff4a9166231e375613ff53e 112 Pfam PF01420 Type I restriction modification DNA specificity domain 35 79 7.5E-7 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMK58_RS06815 e895d93ceff4a9166231e375613ff53e 112 SUPERFAMILY SSF116734 2 97 1.37E-15 T 22-04-2016 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 PANTHER PTHR11751 78 464 3.0E-52 T 22-04-2016 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 SMART SM00345 19 78 4.4E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 Gene3D G3DSA:3.40.640.10 131 348 5.0E-54 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 SUPERFAMILY SSF46785 12 88 5.84E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 Pfam PF00155 Aminotransferase class I and II 131 433 4.2E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 Gene3D G3DSA:1.10.10.10 12 79 8.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 SUPERFAMILY SSF53383 94 454 1.21E-72 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 6.5E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS06000 9d783e5d769db9704f52c4c559bd2791 464 PANTHER PTHR11751:SF407 78 464 3.0E-52 T 22-04-2016 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 SMART SM00382 48 231 1.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 54 381 2.3E-129 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 Gene3D G3DSA:3.40.50.300 18 259 6.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 PANTHER PTHR24220:SF481 25 374 5.5E-171 T 22-04-2016 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 SUPERFAMILY SSF50331 257 381 1.91E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 Pfam PF08402 TOBE domain 299 381 5.3E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 Pfam PF00005 ABC transporter 40 181 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 SUPERFAMILY SSF52540 24 264 3.64E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS07850 8948f59389e8886a796e892d3dba72a0 383 PANTHER PTHR24220 25 374 5.5E-171 T 22-04-2016 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PANTHER PTHR24422:SF13 20 303 1.3E-95 T 22-04-2016 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 SUPERFAMILY SSF47757 28 102 3.4E-17 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 Pfam PF01739 CheR methyltransferase, SAM binding domain 103 300 4.4E-62 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 57 70 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 139 159 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 265 288 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 175 191 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 246 260 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PRINTS PR00996 Glutamate methyltransferase family signature 96 108 1.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PIRSF PIRSF000410 18 306 5.4E-101 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 PANTHER PTHR24422 20 303 1.3E-95 T 22-04-2016 AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 Gene3D G3DSA:1.10.155.10 26 101 1.8E-23 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 SUPERFAMILY SSF53335 103 304 3.58E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 Gene3D G3DSA:3.40.50.150 102 303 5.0E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 Pfam PF03705 CheR methyltransferase, all-alpha domain 37 87 3.3E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK58_RS02390 a501fdd7832d6761094cdc13b500c30b 306 SMART SM00138 35 306 4.3E-108 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 SMART SM00382 30 225 4.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 SUPERFAMILY SSF52540 1 228 2.28E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 PANTHER PTHR24220:SF336 3 242 2.9E-98 T 22-04-2016 AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 Pfam PF00005 ABC transporter 22 167 8.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 PANTHER PTHR24220 3 242 2.9E-98 T 22-04-2016 AMK58_RS13025 d4cc2740dd0d8d91443b0a38ca54ab3e 258 Gene3D G3DSA:3.40.50.300 1 240 3.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07925 6ec538d184f08a9d0ed26258f4b09c41 191 SUPERFAMILY SSF55729 15 170 3.26E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07925 6ec538d184f08a9d0ed26258f4b09c41 191 Pfam PF00583 Acetyltransferase (GNAT) family 64 138 4.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS07925 6ec538d184f08a9d0ed26258f4b09c41 191 Gene3D G3DSA:3.40.630.30 15 170 6.6E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07925 6ec538d184f08a9d0ed26258f4b09c41 191 PANTHER PTHR23091 14 172 3.1E-16 T 22-04-2016 AMK58_RS00500 47f49734a956096441064246f3d149ac 180 SUPERFAMILY SSF55729 11 171 2.45E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS00500 47f49734a956096441064246f3d149ac 180 Pfam PF00583 Acetyltransferase (GNAT) family 65 146 9.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS00500 47f49734a956096441064246f3d149ac 180 PANTHER PTHR13947 60 154 1.1E-16 T 22-04-2016 AMK58_RS00500 47f49734a956096441064246f3d149ac 180 Gene3D G3DSA:3.40.630.30 8 172 1.4E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 105 120 3.4E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 59 67 3.4E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 141 157 3.4E-16 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 PANTHER PTHR33695:SF1 17 167 3.0E-45 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 TIGRFAM TIGR00077 lspA: signal peptidase II 12 165 1.6E-34 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 PANTHER PTHR33695 17 167 3.0E-45 T 22-04-2016 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 Pfam PF01252 Signal peptidase (SPase) II 20 161 1.2E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 ProSitePatterns PS00855 Signal peptidases II signature. 108 120 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS10980 31b62258569388e16fb3b9cfb14085cd 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 11 166 16.298 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 PIRSF PIRSF000139 5 427 4.1E-127 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 Pfam PF02754 Cysteine-rich domain 185 270 1.2E-12 T 22-04-2016 IPR004017 Cysteine-rich domain AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 Pfam PF02754 Cysteine-rich domain 317 400 4.7E-11 T 22-04-2016 IPR004017 Cysteine-rich domain AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 PANTHER PTHR32479:SF2 14 403 8.0E-119 T 22-04-2016 AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 SUPERFAMILY SSF54862 22 118 1.55E-20 T 22-04-2016 AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 PANTHER PTHR32479 14 403 8.0E-119 T 22-04-2016 AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 Gene3D G3DSA:1.10.1060.10 17 107 4.8E-21 T 22-04-2016 AMK58_RS04820 d4db710bed9e84287506edfdfec41785 448 Pfam PF12838 4Fe-4S dicluster domain 24 90 1.3E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 SMART SM00116 15 67 2.4E-4 T 22-04-2016 IPR000644 CBS domain AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 SMART SM00116 85 136 0.038 T 22-04-2016 IPR000644 CBS domain AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 Pfam PF00571 CBS domain 79 134 8.1E-11 T 22-04-2016 IPR000644 CBS domain AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 Pfam PF00571 CBS domain 15 65 5.0E-7 T 22-04-2016 IPR000644 CBS domain AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 SUPERFAMILY SSF54631 8 147 2.56E-26 T 22-04-2016 AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 PANTHER PTHR11911 14 160 8.2E-29 T 22-04-2016 AMK58_RS12535 b4bdd155f2e6361b14917a4a11190676 161 Gene3D G3DSA:3.10.580.10 9 132 1.3E-30 T 22-04-2016 AMK58_RS08045 e3b3f53afcc23fef4efb0503249e344b 184 Gene3D G3DSA:3.40.30.10 11 137 5.8E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08045 e3b3f53afcc23fef4efb0503249e344b 184 SUPERFAMILY SSF52833 5 182 5.62E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS08045 e3b3f53afcc23fef4efb0503249e344b 184 PANTHER PTHR10681 1 182 6.6E-43 T 22-04-2016 AMK58_RS08045 e3b3f53afcc23fef4efb0503249e344b 184 PANTHER PTHR10681:SF91 1 182 6.6E-43 T 22-04-2016 AMK58_RS08045 e3b3f53afcc23fef4efb0503249e344b 184 Pfam PF00578 AhpC/TSA family 11 131 6.0E-22 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS03250 1488787bd20b268485bb09178a2f49e7 895 Pfam PF10139 Putative bacterial virulence factor 22 882 5.9E-298 T 22-04-2016 IPR017030 Virulence effector, SrfC AMK58_RS03250 1488787bd20b268485bb09178a2f49e7 895 PIRSF PIRSF034586 2 890 1.2E-205 T 22-04-2016 IPR017030 Virulence effector, SrfC AMK58_RS10195 037943db9cbb0083f8e8e0eef9531280 98 Pfam PF10135 Rod binding protein 42 87 1.4E-13 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal AMK58_RS05585 533499ce146717019dd139b2e0539406 511 Pfam PF00005 ABC transporter 25 171 3.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05585 533499ce146717019dd139b2e0539406 511 Pfam PF00005 ABC transporter 277 436 3.9E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05585 533499ce146717019dd139b2e0539406 511 PANTHER PTHR24220:SF239 9 389 1.7E-166 T 22-04-2016 AMK58_RS05585 533499ce146717019dd139b2e0539406 511 SUPERFAMILY SSF52540 243 495 5.91E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05585 533499ce146717019dd139b2e0539406 511 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS05585 533499ce146717019dd139b2e0539406 511 SMART SM00382 285 485 0.23 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05585 533499ce146717019dd139b2e0539406 511 SMART SM00382 32 220 7.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05585 533499ce146717019dd139b2e0539406 511 Gene3D G3DSA:3.40.50.300 252 499 2.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05585 533499ce146717019dd139b2e0539406 511 PANTHER PTHR24220 9 389 1.7E-166 T 22-04-2016 AMK58_RS05585 533499ce146717019dd139b2e0539406 511 Gene3D G3DSA:3.40.50.300 4 233 3.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05585 533499ce146717019dd139b2e0539406 511 SUPERFAMILY SSF52540 6 225 2.93E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 Pfam PF04055 Radical SAM superfamily 54 222 1.8E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 PIRSF PIRSF000167 1 451 2.6E-163 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 Gene3D G3DSA:3.80.30.20 50 251 2.7E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 SMART SM00729 48 269 3.2E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 PANTHER PTHR13932:SF6 2 447 6.0E-178 T 22-04-2016 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 PANTHER PTHR13932 2 447 6.0E-178 T 22-04-2016 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 449 1.3E-132 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 AMK58_RS12065 e0966c4dfd2decb07dc056c415af9cac 451 SUPERFAMILY SSF102114 6 440 1.03E-121 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 PANTHER PTHR32347:SF15 24 315 7.6E-48 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 PANTHER PTHR32347 24 315 7.6E-48 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 Gene3D G3DSA:2.40.50.100 187 225 6.4E-7 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 Gene3D G3DSA:2.40.50.100 35 65 6.4E-7 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 Pfam PF13533 Biotin-lipoyl like 36 78 2.6E-7 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 Pfam PF13437 HlyD family secretion protein 199 306 1.7E-11 T 22-04-2016 AMK58_RS04775 afc2c39f3778d437ab9b4d9ba9e9bd75 315 SUPERFAMILY SSF111369 34 89 1.31E-6 T 22-04-2016 AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SUPERFAMILY SSF50998 77 450 1.96E-81 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 Gene3D G3DSA:2.140.10.10 80 459 8.8E-80 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 Gene3D G3DSA:2.140.10.10 28 37 8.8E-80 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 216 247 0.054 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 261 292 290.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 130 161 0.14 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 312 343 50.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 175 207 0.0092 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 400 431 0.013 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 SMART SM00564 350 381 520.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 Pfam PF13360 PQQ-like domain 143 379 5.5E-63 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 Pfam PF13360 PQQ-like domain 398 459 4.6E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 PANTHER PTHR32303:SF8 107 367 1.1E-22 T 22-04-2016 AMK58_RS08035 128a59da16a98c721d942ef4110644e4 460 PANTHER PTHR32303 107 367 1.1E-22 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 Gene3D G3DSA:3.40.190.10 95 176 2.1E-24 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 PANTHER PTHR30537:SF26 1 298 2.3E-89 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 SUPERFAMILY SSF46785 4 86 9.09E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 SUPERFAMILY SSF53850 93 292 1.99E-33 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 Gene3D G3DSA:3.40.190.10 177 258 3.5E-21 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 Gene3D G3DSA:1.10.10.10 8 87 1.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 PANTHER PTHR30537 1 298 2.3E-89 T 22-04-2016 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS11455 843491da8cc2816b177016756267f5c2 298 Pfam PF03466 LysR substrate binding domain 91 290 6.1E-34 T 22-04-2016 IPR005119 LysR, substrate-binding AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 SUPERFAMILY SSF48013 8 149 4.91E-29 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 Gene3D G3DSA:3.40.50.150 224 435 5.2E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PANTHER PTHR22807 1 436 2.2E-86 T 22-04-2016 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PANTHER PTHR22807:SF30 1 436 2.2E-86 T 22-04-2016 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 Pfam PF01029 NusB family 7 128 1.2E-21 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 434 9.7E-49 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 Gene3D G3DSA:1.10.940.10 7 149 1.7E-34 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 353 369 8.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 242 252 8.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 8.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 227 8.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 303 315 8.0E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK58_RS02100 c427d4981cb8427db7ef6bac99534c37 438 SUPERFAMILY SSF53335 145 435 7.9E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 PANTHER PTHR24423:SF474 200 434 8.4E-20 T 22-04-2016 AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 PANTHER PTHR24423 200 434 8.4E-20 T 22-04-2016 AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 SUPERFAMILY SSF55874 297 435 3.8E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 435 4.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 SUPERFAMILY SSF47384 216 280 6.08E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 Gene3D G3DSA:3.30.565.10 309 434 2.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12345 f1f7c61371e19f384a33106e5409ec08 443 SMART SM00387 331 438 1.2E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 438 4.6E-168 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 PANTHER PTHR30108 1 501 1.4E-238 T 22-04-2016 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 Gene3D G3DSA:1.20.5.570 462 502 7.7E-14 T 22-04-2016 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 SUPERFAMILY SSF50475 3 329 4.71E-117 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 SUPERFAMILY SSF143968 330 494 7.06E-68 T 22-04-2016 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 462 9.7E-161 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 PANTHER PTHR30108:SF1 1 501 1.4E-238 T 22-04-2016 AMK58_RS10800 9095f1d9b83b37cd2d21d1111b03c0c6 503 Gene3D G3DSA:3.40.1670.10 344 461 8.7E-54 T 22-04-2016 AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 121 26.285 T 22-04-2016 IPR002930 Glycine cleavage system H-protein AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 Pfam PF01597 Glycine cleavage H-protein 4 121 5.1E-42 T 22-04-2016 IPR002930 Glycine cleavage system H-protein AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 Gene3D G3DSA:2.40.50.100 3 122 3.0E-51 T 22-04-2016 AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 SUPERFAMILY SSF51230 3 121 1.94E-43 T 22-04-2016 IPR011053 Single hybrid motif AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 2.9E-42 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 AMK58_RS09425 841e1ccd619f1a83a2db67d938cc3281 124 PANTHER PTHR11715 4 121 1.1E-66 T 22-04-2016 IPR002930 Glycine cleavage system H-protein AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 SUPERFAMILY SSF47336 2 75 1.31E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.422 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 2.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 5.9E-33 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.6E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 Gene3D G3DSA:1.10.1200.10 3 76 2.4E-33 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK58_RS07410 a684240909d2c3847622bced94fa6c11 79 PANTHER PTHR20863 3 73 7.1E-30 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 PANTHER PTHR30605 1 354 4.8E-127 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 354 38.952 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 PANTHER PTHR30605:SF0 1 354 4.8E-127 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 SUPERFAMILY SSF53067 136 325 9.93E-20 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 SUPERFAMILY SSF53067 4 106 9.93E-20 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 Gene3D G3DSA:3.30.420.40 2 190 7.2E-68 T 22-04-2016 AMK58_RS04895 bee8eebbd3aa06ed7904587e9eba843b 355 Pfam PF03702 Uncharacterised protein family (UPF0075) 3 353 8.9E-95 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AMK58_RS11115 d76d152cc9b09af1195de6385c588b41 293 SUPERFAMILY SSF56529 73 291 1.03E-83 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS11115 d76d152cc9b09af1195de6385c588b41 293 Gene3D G3DSA:3.90.850.10 69 290 2.9E-91 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS11115 d76d152cc9b09af1195de6385c588b41 293 PANTHER PTHR11820 1 290 2.7E-113 T 22-04-2016 AMK58_RS11115 d76d152cc9b09af1195de6385c588b41 293 PANTHER PTHR11820:SF6 1 290 2.7E-113 T 22-04-2016 AMK58_RS11115 d76d152cc9b09af1195de6385c588b41 293 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 290 1.2E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS02200 da9141f47c9f0b6f3fc1da3249034b7d 134 Pfam PF06155 Protein of unknown function (DUF971) 20 104 6.4E-28 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 AMK58_RS02200 da9141f47c9f0b6f3fc1da3249034b7d 134 PANTHER PTHR35303 4 134 1.3E-50 T 22-04-2016 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 Pfam PF03952 Enolase, N-terminal domain 4 134 1.2E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 SUPERFAMILY SSF54826 3 138 5.96E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 Gene3D G3DSA:3.20.20.120 128 424 2.1E-132 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PANTHER PTHR11902 1 420 2.4E-256 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 SUPERFAMILY SSF51604 141 422 2.83E-126 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 SMART SM01193 4 134 1.1E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 Hamap MF_00318 Enolase [eno]. 2 411 44.67 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 SMART SM01192 139 425 4.7E-220 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 37 51 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 311 322 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 334 348 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 107 123 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 161 174 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PRINTS PR00148 Enolase signature 363 380 9.2E-49 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 Gene3D G3DSA:3.30.390.10 4 125 1.1E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 1.3E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 2.8E-130 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK58_RS06495 2a13962317f0f676c28fa8cf6687ede9 425 PIRSF PIRSF001400 1 425 2.5E-186 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK58_RS00940 b9fcf76e0e259b5a20dc76d128bf4333 294 Gene3D G3DSA:1.10.3720.10 17 286 1.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00940 b9fcf76e0e259b5a20dc76d128bf4333 294 PANTHER PTHR30193:SF10 16 286 6.4E-75 T 22-04-2016 AMK58_RS00940 b9fcf76e0e259b5a20dc76d128bf4333 294 PANTHER PTHR30193 16 286 6.4E-75 T 22-04-2016 AMK58_RS00940 b9fcf76e0e259b5a20dc76d128bf4333 294 SUPERFAMILY SSF161098 15 286 7.94E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00940 b9fcf76e0e259b5a20dc76d128bf4333 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 281 1.1E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.187 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 281 2.2E-108 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 Gene3D G3DSA:3.90.226.10 19 281 3.8E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.8E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.8E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.8E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.8E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.8E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 Pfam PF01039 Carboxyl transferase domain 93 241 1.6E-19 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PANTHER PTHR22855 1 281 8.0E-136 T 22-04-2016 AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 SUPERFAMILY SSF52096 25 281 1.78E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS01640 d8b3d866178cae6799529182bad919a2 326 PANTHER PTHR22855:SF17 1 281 8.0E-136 T 22-04-2016 AMK58_RS06940 414014196c354d9dabf30c76acb5d793 400 Pfam PF07690 Major Facilitator Superfamily 21 347 1.6E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06940 414014196c354d9dabf30c76acb5d793 400 Gene3D G3DSA:1.20.1250.20 27 193 3.4E-14 T 22-04-2016 AMK58_RS06940 414014196c354d9dabf30c76acb5d793 400 Gene3D G3DSA:1.20.1250.20 214 388 8.6E-14 T 22-04-2016 AMK58_RS06940 414014196c354d9dabf30c76acb5d793 400 PANTHER PTHR23534 14 387 9.0E-74 T 22-04-2016 AMK58_RS06940 414014196c354d9dabf30c76acb5d793 400 SUPERFAMILY SSF103473 14 389 4.58E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 SUPERFAMILY SSF48613 3 216 1.93E-68 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 Pfam PF03070 TENA/THI-4/PQQC family 14 218 4.9E-44 T 22-04-2016 IPR004305 Thiaminase-2/PQQC AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 Gene3D G3DSA:1.20.910.10 3 218 7.7E-74 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 218 6.2E-44 T 22-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 PANTHER PTHR20858 12 182 3.4E-64 T 22-04-2016 AMK58_RS02810 a17c11392d4734472434c4b19c39e4e2 221 PANTHER PTHR20858:SF17 12 182 3.4E-64 T 22-04-2016 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 SUPERFAMILY SSF51621 10 269 4.49E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 PANTHER PTHR20881 9 274 8.6E-136 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 42.269 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 7.5E-107 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 269 1.7E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 PIRSF PIRSF000388 1 272 5.5E-103 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS05400 f893b007f712f55fee06eb71e072470f 274 Gene3D G3DSA:3.20.20.60 9 269 1.9E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 SMART SM00044 1 139 1.1E-4 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 SUPERFAMILY SSF55073 3 165 2.04E-41 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 Gene3D G3DSA:2.60.200.20 204 253 1.3E-12 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 PANTHER PTHR11920 1 180 2.0E-15 T 22-04-2016 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 SUPERFAMILY SSF49879 190 253 2.3E-15 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 5 152 1.5E-15 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 PANTHER PTHR11920:SF257 1 180 2.0E-15 T 22-04-2016 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 Gene3D G3DSA:3.30.70.1230 5 163 2.9E-26 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 Pfam PF00498 FHA domain 208 255 3.9E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK58_RS04755 65f521fc1760b40999312ee53973ac7e 296 SMART SM00240 207 256 8.0E-6 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK58_RS04240 66abbaf417db3a055b993d3c27ab13cc 213 PANTHER PTHR30098 3 197 2.2E-72 T 22-04-2016 AMK58_RS04240 66abbaf417db3a055b993d3c27ab13cc 213 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 10 193 1.9E-61 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK58_RS04240 66abbaf417db3a055b993d3c27ab13cc 213 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 213 84.294 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK58_RS04240 66abbaf417db3a055b993d3c27ab13cc 213 SUPERFAMILY SSF55729 4 198 9.0E-79 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS04240 66abbaf417db3a055b993d3c27ab13cc 213 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 8 178 4.5E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 Gene3D G3DSA:3.40.50.2020 161 267 1.5E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 SUPERFAMILY SSF53271 85 270 2.49E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 14 294 3.1E-46 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 SMART SM01400 5 118 2.4E-25 T 22-04-2016 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 Pfam PF00156 Phosphoribosyl transferase domain 149 247 4.7E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 SUPERFAMILY SSF53271 11 158 4.44E-29 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 PANTHER PTHR10210:SF32 17 267 1.7E-36 T 22-04-2016 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 PANTHER PTHR10210 17 267 1.7E-36 T 22-04-2016 AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 Gene3D G3DSA:3.40.50.2020 5 160 5.4E-23 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS05945 77e3ed72865a5e02d18f1632c460b922 297 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 17 114 1.1E-14 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 Gene3D G3DSA:3.30.1330.60 134 244 6.2E-41 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 Pfam PF00691 OmpA family 143 238 5.8E-26 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01021 OMPA domain signature 174 189 5.4E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01021 OMPA domain signature 189 205 5.4E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01021 OMPA domain signature 144 166 5.4E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 SUPERFAMILY SSF103088 135 244 2.35E-38 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 Pfam PF14346 Domain of unknown function (DUF4398) 23 117 1.5E-14 T 22-04-2016 IPR025511 Domain of unknown function DUF4398 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 207 226 1.3E-5 T 22-04-2016 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 206 1.3E-5 T 22-04-2016 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 227 247 1.3E-5 T 22-04-2016 AMK58_RS01965 5ade00aca14f6ecf23e9a81dc1934a75 255 PANTHER PTHR30128 102 244 1.4E-43 T 22-04-2016 AMK58_RS03360 c91eff81721312202872246fcf42c863 303 Pfam PF01738 Dienelactone hydrolase family 70 299 6.0E-17 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK58_RS03360 c91eff81721312202872246fcf42c863 303 PANTHER PTHR17630 41 256 9.2E-16 T 22-04-2016 AMK58_RS03360 c91eff81721312202872246fcf42c863 303 SUPERFAMILY SSF53474 59 301 1.31E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03360 c91eff81721312202872246fcf42c863 303 Gene3D G3DSA:3.40.50.1820 48 302 1.5E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 8 149 8.5E-41 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 SMART SM00852 10 156 4.7E-32 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 Gene3D G3DSA:3.40.980.10 5 166 1.1E-56 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 Pfam PF00994 Probable molybdopterin binding domain 10 154 4.5E-33 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 SUPERFAMILY SSF53218 6 178 1.44E-49 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS05775 f10b61dcbe6e2626b11f11c174a84d76 179 PANTHER PTHR10192 2 179 4.4E-82 T 22-04-2016 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 PANTHER PTHR11601 1 381 5.5E-147 T 22-04-2016 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 Gene3D G3DSA:3.90.1150.10 246 375 5.1E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 PANTHER PTHR11601:SF20 1 381 5.5E-147 T 22-04-2016 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 Gene3D G3DSA:3.40.640.10 14 245 3.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 Pfam PF00266 Aminotransferase class-V 2 369 5.2E-70 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 PIRSF PIRSF005572 1 383 5.2E-123 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK58_RS04720 1e3cfff095f4c4e56afb04ce98f96152 383 SUPERFAMILY SSF53383 1 377 2.13E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 Gene3D G3DSA:3.40.50.2300 311 366 5.0E-38 T 22-04-2016 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 Gene3D G3DSA:3.40.50.2300 29 157 5.0E-38 T 22-04-2016 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 PANTHER PTHR30483 1 378 8.0E-56 T 22-04-2016 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 SUPERFAMILY SSF53822 32 380 1.2E-73 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 Pfam PF13458 Periplasmic binding protein 33 377 1.9E-65 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 Gene3D G3DSA:3.40.50.2300 162 310 3.1E-18 T 22-04-2016 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 34 50 2.6E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 2.6E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 75 93 2.6E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS03190 3ff75ced2410763fdfe7096d105c172c 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 273 291 2.6E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS10945 a9d23360928cd04994823715090faac0 313 PANTHER PTHR11614 21 309 1.3E-55 T 22-04-2016 AMK58_RS10945 a9d23360928cd04994823715090faac0 313 Pfam PF12146 Serine aminopeptidase, S33 36 294 8.6E-41 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 AMK58_RS10945 a9d23360928cd04994823715090faac0 313 PANTHER PTHR11614:SF100 21 309 1.3E-55 T 22-04-2016 AMK58_RS10945 a9d23360928cd04994823715090faac0 313 SUPERFAMILY SSF53474 7 310 8.73E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10945 a9d23360928cd04994823715090faac0 313 Gene3D G3DSA:3.40.50.1820 6 309 4.2E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 28 1.4E-7 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 SUPERFAMILY SSF47203 282 460 3.06E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Gene3D G3DSA:2.40.110.10 161 266 4.7E-26 T 22-04-2016 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 594 2.0E-27 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 1.2E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 4.2E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Gene3D G3DSA:1.10.540.10 39 158 7.3E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 450 3.7E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 Gene3D G3DSA:1.20.140.10 267 458 6.5E-55 T 22-04-2016 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 PANTHER PTHR10909 3 474 3.3E-202 T 22-04-2016 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 PANTHER PTHR10909:SF296 3 474 3.3E-202 T 22-04-2016 AMK58_RS04840 3fee15e35e4db85b0188b35b5b7a0f03 599 SUPERFAMILY SSF56645 38 271 2.2E-58 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 PANTHER PTHR32089:SF51 91 165 1.4E-20 T 22-04-2016 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 82 166 9.1E-23 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 Gene3D G3DSA:1.10.287.950 36 167 4.2E-28 T 22-04-2016 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 106 133 2.4E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 135 164 2.4E-13 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 SUPERFAMILY SSF58104 22 166 2.88E-28 T 22-04-2016 AMK58_RS15720 d849887c0b1f232b254cd926b103f33e 167 PANTHER PTHR32089 91 165 1.4E-20 T 22-04-2016 AMK58_RS15300 45949bd35e2c9f35ffe0dcdf6734f5f5 83 SUPERFAMILY SSF51366 1 82 4.71E-29 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS15300 45949bd35e2c9f35ffe0dcdf6734f5f5 83 Gene3D G3DSA:3.20.20.70 1 81 4.1E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS15300 45949bd35e2c9f35ffe0dcdf6734f5f5 83 Pfam PF00290 Tryptophan synthase alpha chain 2 81 3.1E-30 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS15300 45949bd35e2c9f35ffe0dcdf6734f5f5 83 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 38 51 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 Gene3D G3DSA:3.20.20.370 4 302 2.6E-107 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 Pfam PF01522 Polysaccharide deacetylase 76 164 2.3E-11 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 PANTHER PTHR10587:SF72 10 299 9.5E-164 T 22-04-2016 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 SUPERFAMILY SSF88713 4 301 1.33E-95 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 PANTHER PTHR10587 10 299 9.5E-164 T 22-04-2016 AMK58_RS02445 aa3009726682fce79380ab32179318bc 305 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 301 4.1E-170 T 22-04-2016 IPR017625 Putative urate catabolism protein AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 175 26.815 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 SUPERFAMILY SSF47240 11 142 3.01E-18 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 11 175 2.6E-65 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 PANTHER PTHR11237 11 175 3.5E-77 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 Gene3D G3DSA:1.20.1260.10 11 140 9.6E-7 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS03570 d79eb01dd1515c9244364c683f712548 175 PANTHER PTHR11237:SF4 11 175 3.5E-77 T 22-04-2016 AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 550 568 4.6E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 SMART SM00382 361 546 9.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 Pfam PF00005 ABC transporter 353 497 1.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 SUPERFAMILY SSF52540 335 567 4.92E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 293 4.8E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 PANTHER PTHR24220 338 571 4.7E-84 T 22-04-2016 AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 PANTHER PTHR24220:SF358 338 571 4.7E-84 T 22-04-2016 AMK58_RS05645 339ab6bfe45c810ae4efede2ec40edf9 571 Gene3D G3DSA:3.40.50.300 333 566 1.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 SUPERFAMILY SSF90123 8 308 7.32E-35 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 Gene3D G3DSA:1.20.1560.10 10 304 4.6E-31 T 22-04-2016 AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 PANTHER PTHR24222:SF0 6 530 2.1E-129 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 SMART SM00382 345 531 4.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 Pfam PF00005 ABC transporter 336 484 3.7E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 Gene3D G3DSA:3.40.50.300 319 537 9.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 PANTHER PTHR24222 6 530 2.1E-129 T 22-04-2016 AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 SUPERFAMILY SSF52540 310 535 7.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06535 977c896d09770d4e2e73380b8b7b919e 563 Pfam PF00664 ABC transporter transmembrane region 15 269 9.5E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS03140 5c73e2886be6a4760a31ef72816eff6b 336 Gene3D G3DSA:3.40.50.1000 66 81 5.0E-18 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS03140 5c73e2886be6a4760a31ef72816eff6b 336 Gene3D G3DSA:3.40.50.1000 164 302 5.0E-18 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS03140 5c73e2886be6a4760a31ef72816eff6b 336 Pfam PF12710 haloacid dehalogenase-like hydrolase 68 272 2.4E-25 T 22-04-2016 AMK58_RS03140 5c73e2886be6a4760a31ef72816eff6b 336 SUPERFAMILY SSF56784 66 319 3.92E-26 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 SMART SM00825 Beta-ketoacyl synthase 4 377 1.1E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 PANTHER PTHR11712 1 406 2.0E-100 T 22-04-2016 AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 3.2E-26 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 9.0E-39 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 Gene3D G3DSA:3.40.47.10 262 406 2.0E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 SUPERFAMILY SSF53901 215 406 4.28E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 Gene3D G3DSA:3.40.47.10 1 259 1.1E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS11150 9c391b46ed8d75f5894ae0316819a650 407 SUPERFAMILY SSF53901 1 251 1.99E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK58_RS06690 cd18b861e76ec525966160b31f515668 104 PANTHER PTHR23419 3 104 1.8E-41 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMK58_RS06690 cd18b861e76ec525966160b31f515668 104 SUPERFAMILY SSF54913 2 103 7.41E-36 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK58_RS06690 cd18b861e76ec525966160b31f515668 104 Pfam PF03091 CutA1 divalent ion tolerance protein 5 101 1.1E-36 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMK58_RS06690 cd18b861e76ec525966160b31f515668 104 Gene3D G3DSA:3.30.70.830 2 103 1.2E-39 T 22-04-2016 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 PANTHER PTHR23502:SF19 23 424 2.4E-89 T 22-04-2016 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 PANTHER PTHR23502 23 424 2.4E-89 T 22-04-2016 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 Pfam PF07690 Major Facilitator Superfamily 25 365 9.5E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 SUPERFAMILY SSF103473 16 400 1.83E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 Gene3D G3DSA:1.20.1250.20 215 412 1.0E-16 T 22-04-2016 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 Gene3D G3DSA:1.20.1250.20 17 197 2.8E-26 T 22-04-2016 AMK58_RS06765 24a9711916ca21b061cfedda3e7c5643 464 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 394 3.1E-77 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 Pfam PF00069 Protein kinase domain 18 270 1.7E-34 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 SUPERFAMILY SSF48452 299 473 1.57E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 Gene3D G3DSA:1.25.40.10 297 474 9.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 SUPERFAMILY SSF56112 6 293 8.77E-53 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 139 151 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 Gene3D G3DSA:3.30.200.20 9 130 4.9E-15 T 22-04-2016 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 SMART SM00220 18 276 1.2E-28 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 Gene3D G3DSA:1.10.510.10 131 285 6.5E-34 T 22-04-2016 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 PANTHER PTHR24362 6 317 3.4E-49 T 22-04-2016 AMK58_RS01815 754a4b8e78838af27cbf293e874c1758 486 PANTHER PTHR24362 431 440 3.4E-49 T 22-04-2016 AMK58_RS11260 ffc51f9df1e985c8f86d531e150931a8 599 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 6 582 1.8E-154 T 22-04-2016 IPR010144 CRISPR-associated protein, Csd1-type AMK58_RS11260 ffc51f9df1e985c8f86d531e150931a8 599 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 7 581 8.5E-158 T 22-04-2016 IPR010144 CRISPR-associated protein, Csd1-type AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 PIRSF PIRSF002811 1 632 1.2E-131 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Gene3D G3DSA:3.90.580.10 2 98 1.8E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 PANTHER PTHR30313 1 421 8.7E-132 T 22-04-2016 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Gene3D G3DSA:3.40.1360.10 238 367 8.3E-43 T 22-04-2016 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Hamap MF_00974 DNA primase [dnaG]. 2 630 25.405 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 SMART SM00493 256 331 3.0E-14 T 22-04-2016 IPR006171 Toprim domain AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 248 1.2E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 SUPERFAMILY SSF57783 1 97 9.01E-35 T 22-04-2016 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Pfam PF01807 CHC2 zinc finger 5 97 2.1E-32 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 SMART SM00400 34 88 3.3E-29 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 5.8E-130 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 SUPERFAMILY SSF56731 112 421 1.15E-96 T 22-04-2016 AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Gene3D G3DSA:3.90.980.10 112 237 1.7E-38 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK58_RS09855 426333a4ee69294c66da484e1f0a60fd 644 Pfam PF13662 Toprim domain 257 327 1.5E-13 T 22-04-2016 IPR006171 Toprim domain AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 Gene3D G3DSA:1.10.10.10 13 85 6.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 SMART SM00895 93 214 2.6E-16 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 SMART SM00345 25 83 3.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 9.4E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 Pfam PF07729 FCD domain 94 212 3.0E-24 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 PANTHER PTHR11751 29 109 1.3E-24 T 22-04-2016 AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 SUPERFAMILY SSF46785 17 107 6.45E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 SUPERFAMILY SSF48008 92 222 1.94E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS05860 c8e916117f6809e0a786a595bd3cfd0e 229 Gene3D G3DSA:1.20.120.530 87 225 9.6E-38 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 PANTHER PTHR10160 1 463 5.5E-242 T 22-04-2016 AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 5.3E-195 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 PANTHER PTHR10160:SF24 1 463 5.5E-242 T 22-04-2016 AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 Gene3D G3DSA:3.40.50.1220 290 463 1.1E-86 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 SUPERFAMILY SSF52467 290 463 3.93E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS05390 14a25956d8d4f51bef80600cf9188c4d 464 PIRSF PIRSF000204 1 464 4.5E-218 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 SUPERFAMILY SSF53218 182 306 2.36E-15 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 Gene3D G3DSA:3.90.550.10 342 535 3.3E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 PANTHER PTHR19136 298 535 7.1E-58 T 22-04-2016 AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 SUPERFAMILY SSF53448 342 529 4.06E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 Pfam PF12804 MobA-like NTP transferase domain 346 509 5.7E-41 T 22-04-2016 IPR025877 MobA-like NTP transferase AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 PANTHER PTHR19136:SF78 298 535 7.1E-58 T 22-04-2016 AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 SMART SM00852 171 302 2.4E-4 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 PIRSF PIRSF036626 1 536 9.5E-193 T 22-04-2016 IPR012184 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative AMK58_RS07535 7996532346fd8506f4b6a45d17f3bb9b 536 Gene3D G3DSA:3.40.980.10 149 302 1.8E-12 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS11225 feda7f5393c3395dd641933d814ead80 367 Gene3D G3DSA:3.40.50.1820 46 307 1.2E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11225 feda7f5393c3395dd641933d814ead80 367 SUPERFAMILY SSF53474 24 309 2.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11225 feda7f5393c3395dd641933d814ead80 367 Pfam PF12146 Serine aminopeptidase, S33 61 291 2.7E-53 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 AMK58_RS11225 feda7f5393c3395dd641933d814ead80 367 PANTHER PTHR11614 46 330 7.7E-47 T 22-04-2016 AMK58_RS11640 ead6089c7139ba06786c07bcb90023be 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 322 3.8E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS11640 ead6089c7139ba06786c07bcb90023be 339 PANTHER PTHR30482:SF2 16 338 2.3E-90 T 22-04-2016 AMK58_RS11640 ead6089c7139ba06786c07bcb90023be 339 PANTHER PTHR30482 16 338 2.3E-90 T 22-04-2016 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 PANTHER PTHR10060:SF20 1 258 3.9E-124 T 22-04-2016 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 3.5E-86 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 Gene3D G3DSA:3.20.20.140 1 254 6.4E-93 T 22-04-2016 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 SUPERFAMILY SSF51556 1 256 2.53E-91 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 Pfam PF01026 TatD related DNase 3 254 6.4E-79 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 PANTHER PTHR10060 1 258 3.9E-124 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK58_RS07805 005e0989db1e736472f247780b0fd8e5 265 PIRSF PIRSF005902 1 258 1.8E-78 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 PRINTS PR00313 NodO calcium binding signature 262 270 4.4E-12 T 22-04-2016 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 PRINTS PR00313 NodO calcium binding signature 316 325 4.4E-12 T 22-04-2016 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 PRINTS PR00313 NodO calcium binding signature 289 297 4.4E-12 T 22-04-2016 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 PRINTS PR00313 NodO calcium binding signature 241 252 4.4E-12 T 22-04-2016 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 PANTHER PTHR38340 224 346 3.4E-14 T 22-04-2016 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Gene3D G3DSA:3.40.390.10 130 199 4.5E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 303 321 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 249 267 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 276 294 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 322 5.1E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 235 251 0.0081 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 288 305 0.0026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 270 287 9.2E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 269 0.001 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 SUPERFAMILY SSF51120 229 377 1.72E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 Gene3D G3DSA:2.150.10.10 231 385 1.9E-37 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS11295 40f6462b8039d7ab6557c41cddf05462 391 SUPERFAMILY SSF55486 119 216 2.88E-5 T 22-04-2016 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 SUPERFAMILY SSF53850 158 250 1.41E-6 T 22-04-2016 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 SUPERFAMILY SSF53850 78 125 1.41E-6 T 22-04-2016 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 PANTHER PTHR33376 1 324 1.1E-68 T 22-04-2016 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 49 274 2.8E-57 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 PIRSF PIRSF006470 1 340 1.7E-87 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AMK58_RS12940 97a960697a1badebad6defd3707221e4 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 324 4.5E-76 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 SUPERFAMILY SSF51366 1 251 1.57E-87 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 PANTHER PTHR21235:SF2 1 254 3.7E-126 T 22-04-2016 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.856 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 Gene3D G3DSA:3.20.20.70 4 252 9.7E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 5.1E-111 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 Pfam PF00977 Histidine biosynthesis protein 5 235 3.4E-93 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 AMK58_RS00490 a028d76632a018647a80aaf6615f24fd 261 PANTHER PTHR21235 1 254 3.7E-126 T 22-04-2016 AMK58_RS10860 a3cf8f8c7e4ee8ab615450847f84cc4e 223 PIRSF PIRSF006324 5 220 2.8E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS10860 a3cf8f8c7e4ee8ab615450847f84cc4e 223 PANTHER PTHR30086:SF3 5 223 1.6E-51 T 22-04-2016 AMK58_RS10860 a3cf8f8c7e4ee8ab615450847f84cc4e 223 PANTHER PTHR30086 5 223 1.6E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS10860 a3cf8f8c7e4ee8ab615450847f84cc4e 223 Pfam PF01810 LysE type translocator 19 217 1.0E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 SUPERFAMILY SSF63882 1 174 9.55E-54 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 SUPERFAMILY SSF63867 324 400 3.53E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 SUPERFAMILY SSF53218 174 318 1.7E-34 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 165 5.5E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Gene3D G3DSA:3.40.980.10 162 324 3.5E-47 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Gene3D G3DSA:3.90.105.10 130 161 2.9E-12 T 22-04-2016 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 SMART SM00852 179 314 1.2E-31 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Gene3D G3DSA:2.40.340.10 325 396 4.8E-19 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Pfam PF03454 MoeA C-terminal region (domain IV) 326 398 3.7E-18 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 PANTHER PTHR10192 1 399 7.1E-134 T 22-04-2016 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Gene3D G3DSA:2.170.190.11 44 129 5.7E-32 T 22-04-2016 AMK58_RS06380 1551c9229c6930e2ad748573c40e72e1 405 Pfam PF00994 Probable molybdopterin binding domain 179 313 2.5E-17 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 36.005 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 PANTHER PTHR21235 1 250 7.0E-103 T 22-04-2016 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 Pfam PF00977 Histidine biosynthesis protein 3 230 1.7E-78 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 1.3E-83 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 SUPERFAMILY SSF51366 1 238 2.83E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 PANTHER PTHR21235:SF15 1 250 7.0E-103 T 22-04-2016 AMK58_RS00495 951090dd6212867efc18216b035a0f5f 254 Gene3D G3DSA:3.20.20.70 1 239 3.8E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS19065 822728095702dd2c0392ae04a28a2e56 68 SUPERFAMILY SSF52172 7 57 9.96E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS19065 822728095702dd2c0392ae04a28a2e56 68 Gene3D G3DSA:3.40.50.2300 6 59 2.0E-11 T 22-04-2016 AMK58_RS19065 822728095702dd2c0392ae04a28a2e56 68 Pfam PF00072 Response regulator receiver domain 6 48 1.2E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 SUPERFAMILY SSF51735 3 250 5.0E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 1.2E-58 T 22-04-2016 AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 Gene3D G3DSA:3.40.50.720 4 250 1.2E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PANTHER PTHR24322 160 191 3.7E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05745 98d4acb9d8b66438681ad7e22c6bb63b 251 PANTHER PTHR24322 10 143 3.7E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 PANTHER PTHR10314 9 319 1.9E-118 T 22-04-2016 AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 Gene3D G3DSA:3.40.50.1100 77 325 9.1E-66 T 22-04-2016 AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 315 5.9E-72 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 PANTHER PTHR10314:SF36 9 319 1.9E-118 T 22-04-2016 AMK58_RS05750 a5adb7d2449aa8f6b71cb175d5acde07 330 SUPERFAMILY SSF53686 11 323 3.27E-88 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS09455 e50cb549239afb20d2fa4a02a50bfa12 160 SUPERFAMILY SSF53098 13 151 2.02E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09455 e50cb549239afb20d2fa4a02a50bfa12 160 Hamap MF_00042 Ribonuclease H [rnhA]. 12 160 35.924 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 AMK58_RS09455 e50cb549239afb20d2fa4a02a50bfa12 160 PANTHER PTHR10642 15 156 3.3E-62 T 22-04-2016 AMK58_RS09455 e50cb549239afb20d2fa4a02a50bfa12 160 Pfam PF00075 RNase H 14 151 2.2E-51 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMK58_RS09455 e50cb549239afb20d2fa4a02a50bfa12 160 Gene3D G3DSA:3.30.420.10 14 154 3.2E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 PRINTS PR01217 Proline rich extensin signature 87 104 1.9E-12 T 22-04-2016 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 PRINTS PR01217 Proline rich extensin signature 69 85 1.9E-12 T 22-04-2016 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 PRINTS PR01217 Proline rich extensin signature 48 69 1.9E-12 T 22-04-2016 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 PRINTS PR01217 Proline rich extensin signature 108 133 1.9E-12 T 22-04-2016 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 SUPERFAMILY SSF74653 284 381 1.33E-5 T 22-04-2016 AMK58_RS09270 8d752e1bce331c25a05b75416d1d252f 385 Gene3D G3DSA:3.30.1150.10 255 384 2.1E-12 T 22-04-2016 AMK58_RS10210 b6b3433a86ec63d2c812ebdfca0691fd 242 Pfam PF13860 FlgD Ig-like domain 126 193 8.8E-12 T 22-04-2016 IPR025965 FlgD Ig-like domain AMK58_RS10210 b6b3433a86ec63d2c812ebdfca0691fd 242 Pfam PF03963 Flagellar hook capping protein - N-terminal region 21 93 1.2E-20 T 22-04-2016 IPR005648 Flagellar hook capping protein AMK58_RS10210 b6b3433a86ec63d2c812ebdfca0691fd 242 PANTHER PTHR30435:SF15 48 224 1.3E-24 T 22-04-2016 AMK58_RS10210 b6b3433a86ec63d2c812ebdfca0691fd 242 PANTHER PTHR30435 48 224 1.3E-24 T 22-04-2016 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 PANTHER PTHR15893 1 87 7.9E-48 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.449 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 PRINTS PR00063 Ribosomal protein L27 signature 4 28 8.5E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 PRINTS PR00063 Ribosomal protein L27 signature 54 78 8.5E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 PRINTS PR00063 Ribosomal protein L27 signature 29 53 8.5E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 8.0E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 Pfam PF01016 Ribosomal L27 protein 2 81 4.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 78 2.0E-15 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 SUPERFAMILY SSF110324 2 81 8.02E-35 T 22-04-2016 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS11670 532516808ccd6edc5adaaa1fb0b9a03b 92 Gene3D G3DSA:2.40.50.100 20 82 1.1E-31 T 22-04-2016 AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 Pfam PF00176 SNF2 family N-terminal domain 682 950 3.7E-64 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 Gene3D G3DSA:3.40.50.300 663 835 4.7E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 SUPERFAMILY SSF52540 630 877 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 PANTHER PTHR10799 653 1108 1.3E-177 T 22-04-2016 AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 PANTHER PTHR10799 629 635 1.3E-177 T 22-04-2016 AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 SUPERFAMILY SSF52540 878 1114 9.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 Pfam PF00271 Helicase conserved C-terminal domain 963 1072 9.7E-16 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 SMART SM00487 662 846 2.7E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 Gene3D G3DSA:3.40.50.300 957 1109 2.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09820 830668d2f020180e96604b6c5de1a5ed 1130 SMART SM00490 992 1072 2.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS00790 91bbd0723138fd42c6bcbb002d40e566 269 PANTHER PTHR30168 1 269 2.5E-126 T 22-04-2016 AMK58_RS00790 91bbd0723138fd42c6bcbb002d40e566 269 Pfam PF04228 Putative neutral zinc metallopeptidase 11 264 2.6E-111 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMK58_RS00790 91bbd0723138fd42c6bcbb002d40e566 269 SUPERFAMILY SSF55486 67 200 1.47E-5 T 22-04-2016 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 Pfam PF00561 alpha/beta hydrolase fold 26 246 2.1E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PANTHER PTHR10992:SF778 1 293 5.9E-69 T 22-04-2016 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PANTHER PTHR10992 1 293 5.9E-69 T 22-04-2016 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PRINTS PR00412 Epoxide hydrolase signature 100 113 1.0E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PRINTS PR00412 Epoxide hydrolase signature 268 290 1.0E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PRINTS PR00412 Epoxide hydrolase signature 114 127 1.0E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 PRINTS PR00412 Epoxide hydrolase signature 32 50 1.0E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 Gene3D G3DSA:3.40.50.1820 2 291 5.8E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS11825 d392950a9f96340ea463cdb97a60263e 293 SUPERFAMILY SSF53474 2 292 4.55E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 PANTHER PTHR14136 271 358 6.3E-47 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 PANTHER PTHR14136 33 231 6.3E-47 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 PANTHER PTHR14136:SF0 271 358 6.3E-47 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 PANTHER PTHR14136:SF0 33 231 6.3E-47 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 SUPERFAMILY SSF141571 264 417 9.81E-33 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 SUPERFAMILY SSF141571 131 232 4.32E-27 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 SUPERFAMILY SSF141571 33 111 2.09E-19 T 22-04-2016 AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 162 199 6.4E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 33 65 0.0062 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 361 400 9.4E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 68 107 2.0E-12 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 310 348 1.0E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 201 231 1.2E-6 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 271 309 6.4E-8 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS10890 aa31e083e76283ea7d07dd5b97794d54 436 Pfam PF00805 Pentapeptide repeats (8 copies) 131 156 9.7E-5 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 Gene3D G3DSA:3.20.20.70 33 316 1.2E-39 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 Pfam PF13186 Iron-sulfur cluster-binding domain 247 313 4.8E-15 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 SUPERFAMILY SSF102114 33 315 5.89E-42 T 22-04-2016 AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 Pfam PF04055 Radical SAM superfamily 41 182 6.0E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 PANTHER PTHR11228 31 315 2.7E-20 T 22-04-2016 AMK58_RS09660 de5c4e19e53b8b49d4c418beb84fa247 338 SMART SM00729 35 249 0.0018 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS15420 f83bd0eb1fa0e0120e382637193cd46a 239 SUPERFAMILY SSF53098 30 117 1.6E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS15420 f83bd0eb1fa0e0120e382637193cd46a 239 Gene3D G3DSA:3.30.420.10 31 85 1.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS08750 39bba7b034c4dc7c2272065dfeabec8b 230 PANTHER PTHR35011 1 181 4.6E-29 T 22-04-2016 AMK58_RS08750 39bba7b034c4dc7c2272065dfeabec8b 230 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 159 2.7E-23 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AMK58_RS06665 a2a59a45216702fe905b584fe12c6390 483 PANTHER PTHR40254 5 483 6.3E-88 T 22-04-2016 AMK58_RS06665 a2a59a45216702fe905b584fe12c6390 483 Gene3D G3DSA:3.50.50.60 5 217 1.1E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS06665 a2a59a45216702fe905b584fe12c6390 483 PANTHER PTHR40254:SF1 5 483 6.3E-88 T 22-04-2016 AMK58_RS06665 a2a59a45216702fe905b584fe12c6390 483 Pfam PF13454 FAD-NAD(P)-binding 11 163 1.6E-38 T 22-04-2016 AMK58_RS06665 a2a59a45216702fe905b584fe12c6390 483 SUPERFAMILY SSF51905 6 259 1.23E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS09655 6ae6c30fcb158d01ff5c88974c6043a8 378 Gene3D G3DSA:2.120.10.10 14 371 5.8E-28 T 22-04-2016 IPR011040 Sialidases AMK58_RS09655 6ae6c30fcb158d01ff5c88974c6043a8 378 Pfam PF13088 BNR repeat-like domain 145 355 1.1E-17 T 22-04-2016 IPR011040 Sialidases AMK58_RS09655 6ae6c30fcb158d01ff5c88974c6043a8 378 SUPERFAMILY SSF50939 94 371 8.97E-28 T 22-04-2016 IPR011040 Sialidases AMK58_RS07910 992755d00ab844b2b9351b285ab73a8d 174 PANTHER PTHR23091:SF187 1 163 3.0E-35 T 22-04-2016 AMK58_RS07910 992755d00ab844b2b9351b285ab73a8d 174 Pfam PF13420 Acetyltransferase (GNAT) domain 3 157 1.2E-25 T 22-04-2016 AMK58_RS07910 992755d00ab844b2b9351b285ab73a8d 174 SUPERFAMILY SSF55729 3 165 2.74E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07910 992755d00ab844b2b9351b285ab73a8d 174 Gene3D G3DSA:3.40.630.30 1 170 2.6E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS07910 992755d00ab844b2b9351b285ab73a8d 174 PANTHER PTHR23091 1 163 3.0E-35 T 22-04-2016 AMK58_RS00180 aca079fcca20fa6f8df944f50455979c 227 PANTHER PTHR11820 23 226 1.5E-91 T 22-04-2016 AMK58_RS00180 aca079fcca20fa6f8df944f50455979c 227 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 25 226 1.5E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS00180 aca079fcca20fa6f8df944f50455979c 227 PANTHER PTHR11820:SF7 23 226 1.5E-91 T 22-04-2016 AMK58_RS00180 aca079fcca20fa6f8df944f50455979c 227 SUPERFAMILY SSF56529 20 226 1.57E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS00180 aca079fcca20fa6f8df944f50455979c 227 Gene3D G3DSA:3.90.850.10 20 226 1.3E-81 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 PANTHER PTHR30411:SF0 1 158 2.0E-57 T 22-04-2016 AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 Pfam PF04073 Aminoacyl-tRNA editing domain 37 148 1.2E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 PIRSF PIRSF006181 1 160 6.7E-48 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 157 8.7E-52 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 Gene3D G3DSA:3.90.960.10 3 157 4.3E-52 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 SUPERFAMILY SSF55826 6 157 1.83E-37 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK58_RS01685 48947d7913427b0339d0a6f1bd2d08c7 160 PANTHER PTHR30411 1 158 2.0E-57 T 22-04-2016 AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 SUPERFAMILY SSF51419 12 227 5.82E-72 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 PANTHER PTHR10146 1 234 2.5E-92 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 Pfam PF01168 Alanine racemase, N-terminal domain 18 230 8.0E-28 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 Gene3D G3DSA:3.20.20.10 11 232 1.6E-81 T 22-04-2016 IPR029066 PLP-binding barrel AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 15 229 2.4E-51 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK58_RS00305 f64747a325fb2f1c7db2f772e2035ae3 235 PIRSF PIRSF004848 7 234 5.7E-64 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 Gene3D G3DSA:1.10.8.60 144 225 2.1E-10 T 22-04-2016 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 333 8.1E-51 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 Gene3D G3DSA:1.20.272.20 226 323 1.8E-7 T 22-04-2016 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 SUPERFAMILY SSF48019 221 335 5.27E-18 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 PANTHER PTHR34388 2 339 5.7E-36 T 22-04-2016 AMK58_RS00340 0291ee2affd965f395ac92a5d57b97dd 340 SUPERFAMILY SSF52540 16 210 5.31E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13885 0b607fbd34c672e9181ab897831e94fc 83 Gene3D G3DSA:3.30.460.10 34 61 4.0E-5 T 22-04-2016 AMK58_RS13885 0b607fbd34c672e9181ab897831e94fc 83 SUPERFAMILY SSF81301 2 62 5.95E-13 T 22-04-2016 AMK58_RS13885 0b607fbd34c672e9181ab897831e94fc 83 Pfam PF01909 Nucleotidyltransferase domain 34 63 1.4E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMK58_RS13210 59de52378e7cecb6dff99011fc48a3d9 361 Pfam PF02628 Cytochrome oxidase assembly protein 24 344 2.2E-105 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 AMK58_RS13210 59de52378e7cecb6dff99011fc48a3d9 361 PANTHER PTHR23289 12 356 1.6E-141 T 22-04-2016 AMK58_RS13210 59de52378e7cecb6dff99011fc48a3d9 361 Hamap MF_01665 Heme A synthase [ctaA]. 20 356 24.432 T 22-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 AMK58_RS13210 59de52378e7cecb6dff99011fc48a3d9 361 PANTHER PTHR23289:SF2 12 356 1.6E-141 T 22-04-2016 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 PANTHER PTHR11921 1 258 2.8E-175 T 22-04-2016 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 SUPERFAMILY SSF54292 27 128 1.48E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 Gene3D G3DSA:3.10.20.30 21 128 6.9E-42 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 Gene3D G3DSA:1.10.1060.10 130 257 1.1E-48 T 22-04-2016 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 251 2.1E-81 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 Pfam PF13183 4Fe-4S dicluster domain 167 240 9.5E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 6.6E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 PANTHER PTHR11921:SF27 1 258 2.8E-175 T 22-04-2016 AMK58_RS02685 4a2eb60a15f3858ae1ef9e7e83ac8f34 258 SUPERFAMILY SSF46548 130 257 1.92E-37 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 PANTHER PTHR10371 15 197 6.2E-110 T 22-04-2016 AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 SUPERFAMILY SSF52833 17 190 1.57E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 172 2.8E-63 T 22-04-2016 AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 PANTHER PTHR10371:SF3 15 197 6.2E-110 T 22-04-2016 AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 Gene3D G3DSA:3.40.30.10 92 178 1.3E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 PIRSF PIRSF000216 1 205 1.2E-77 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK58_RS06140 ad00a125c9b28349e27936ed9dc282ea 205 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 172 5.9E-59 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK58_RS05630 969773a4d2c3e31ff56a75670108c868 125 Gene3D G3DSA:3.30.750.24 27 108 9.3E-17 T 22-04-2016 IPR002645 STAS domain AMK58_RS05630 969773a4d2c3e31ff56a75670108c868 125 Pfam PF13466 STAS domain 27 104 5.6E-14 T 22-04-2016 IPR002645 STAS domain AMK58_RS05630 969773a4d2c3e31ff56a75670108c868 125 SUPERFAMILY SSF52091 26 110 8.44E-16 T 22-04-2016 IPR002645 STAS domain AMK58_RS05630 969773a4d2c3e31ff56a75670108c868 125 PANTHER PTHR33495 27 104 4.6E-12 T 22-04-2016 AMK58_RS25070 440fd73d8f01e131c4b676d3609d4402 426 PANTHER PTHR23029 281 419 3.6E-16 T 22-04-2016 AMK58_RS25070 440fd73d8f01e131c4b676d3609d4402 426 SUPERFAMILY SSF53254 285 426 2.78E-29 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS25070 440fd73d8f01e131c4b676d3609d4402 426 SMART SM00855 287 426 1.0E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS25070 440fd73d8f01e131c4b676d3609d4402 426 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 288 421 5.2E-25 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK58_RS25070 440fd73d8f01e131c4b676d3609d4402 426 Gene3D G3DSA:3.40.50.1240 285 426 1.2E-26 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 Pfam PF03781 Sulfatase-modifying factor enzyme 1 637 862 1.3E-55 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 Gene3D G3DSA:3.90.1580.10 631 864 8.6E-62 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 PANTHER PTHR22576 53 291 1.1E-82 T 22-04-2016 AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 SUPERFAMILY SSF56436 637 864 1.11E-65 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 Gene3D G3DSA:3.40.50.1460 40 183 2.1E-14 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 PANTHER PTHR22576:SF30 53 291 1.1E-82 T 22-04-2016 AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 SUPERFAMILY SSF52129 43 284 5.68E-45 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS08945 6e88d4dc1f071a83bf0eb797401a6fc7 865 Pfam PF00656 Caspase domain 55 282 4.3E-30 T 22-04-2016 AMK58_RS09665 d170385850be1888d418f97a69f311cc 448 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 300 21.137 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial AMK58_RS09665 d170385850be1888d418f97a69f311cc 448 Pfam PF03631 Virulence factor BrkB 19 268 2.2E-49 T 22-04-2016 IPR017039 Virulence factor BrkB AMK58_RS09665 d170385850be1888d418f97a69f311cc 448 PANTHER PTHR30213 1 405 1.4E-80 T 22-04-2016 AMK58_RS09665 d170385850be1888d418f97a69f311cc 448 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 268 1.6E-62 T 22-04-2016 IPR017039 Virulence factor BrkB AMK58_RS09665 d170385850be1888d418f97a69f311cc 448 PANTHER PTHR30213:SF0 1 405 1.4E-80 T 22-04-2016 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 26.101 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 SUPERFAMILY SSF50104 120 176 2.78E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 Gene3D G3DSA:2.30.30.30 115 176 5.4E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 Pfam PF00467 KOW motif 125 155 2.2E-6 T 22-04-2016 IPR005824 KOW AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 Gene3D G3DSA:3.30.70.940 3 112 2.8E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 SMART SM00738 2 110 2.7E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 Pfam PF02357 Transcription termination factor nusG 4 106 8.9E-29 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 SMART SM00739 122 149 1.3E-5 T 22-04-2016 IPR005824 KOW AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 PANTHER PTHR30265 4 176 6.8E-76 T 22-04-2016 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.2E-72 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 4.8E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 4.8E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 4.8E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMK58_RS10470 b7a7065ee56cdedf9b387a21dda6f347 176 SUPERFAMILY SSF82679 4 112 5.89E-41 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 SUPERFAMILY SSF51735 108 295 8.35E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 Gene3D G3DSA:3.40.50.720 8 119 9.6E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 Gene3D G3DSA:3.40.50.720 120 297 8.5E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 4.9E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 Gene3D G3DSA:3.30.70.260 323 410 5.2E-24 T 22-04-2016 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 4.9E-33 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 PANTHER PTHR10996 2 370 5.6E-214 T 22-04-2016 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 SUPERFAMILY SSF52283 8 132 1.34E-44 T 22-04-2016 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 SUPERFAMILY SSF55021 338 410 6.11E-14 T 22-04-2016 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 PANTHER PTHR10996:SF18 2 370 5.6E-214 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMK58_RS09885 dfebb5841b9f8264cc477806fccd6305 415 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 Gene3D G3DSA:1.10.1660.10 2 57 2.5E-23 T 22-04-2016 AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 Pfam PF13411 MerR HTH family regulatory protein 5 70 1.1E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 Gene3D G3DSA:1.10.1660.10 58 122 2.3E-17 T 22-04-2016 AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 SUPERFAMILY SSF46955 4 105 9.16E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 PANTHER PTHR30204 1 112 1.5E-20 T 22-04-2016 AMK58_RS08150 0de6de8032be7766a78792481691d03d 130 SMART SM00422 5 72 7.9E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK58_RS12630 4aecde6c840ac7909da33f24edc0d35d 129 Pfam PF06305 Protein of unknown function (DUF1049) 23 86 2.0E-11 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 PANTHER PTHR33280 1 70 1.1E-25 T 22-04-2016 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 26.66 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 Pfam PF01197 Ribosomal protein L31 1 68 1.4E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 2.2E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 2.2E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.2E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 1.3E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10250 e344d240ea6dfe564577df42c6da651c 74 SUPERFAMILY SSF143800 1 70 1.1E-23 T 22-04-2016 AMK58_RS00795 94090d42e44dae6f00d149f2a0f8fe2c 184 Pfam PF03073 TspO/MBR family 29 164 2.2E-11 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 Gene3D G3DSA:3.40.50.2300 307 357 8.7E-33 T 22-04-2016 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 Gene3D G3DSA:3.40.50.2300 28 154 8.7E-33 T 22-04-2016 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 PANTHER PTHR30483 1 402 2.5E-207 T 22-04-2016 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 PANTHER PTHR30483:SF17 1 402 2.5E-207 T 22-04-2016 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 Pfam PF13458 Periplasmic binding protein 31 368 4.3E-91 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 Gene3D G3DSA:3.40.50.2300 159 306 5.0E-18 T 22-04-2016 AMK58_RS07495 39b535c5e9f00f732215abf41a9b9e40 404 SUPERFAMILY SSF53822 31 402 4.37E-93 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 Gene3D G3DSA:3.40.50.261 14 163 1.8E-21 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 SUPERFAMILY SSF56059 206 404 1.33E-37 T 22-04-2016 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 PANTHER PTHR11117:SF8 1 405 4.8E-157 T 22-04-2016 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 SUPERFAMILY SSF52210 14 171 1.96E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 PANTHER PTHR11117 1 405 4.8E-157 T 22-04-2016 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 Pfam PF13549 ATP-grasp domain 198 405 1.6E-80 T 22-04-2016 AMK58_RS28585 d72f9cd55927997cd625876831ee93b5 405 Gene3D G3DSA:3.30.470.20 209 291 1.4E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PANTHER PTHR13696:SF5 3 260 6.8E-146 T 22-04-2016 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PRINTS PR00091 Nitrogenase component II signature 9 22 6.8E-37 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PRINTS PR00091 Nitrogenase component II signature 31 46 6.8E-37 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PRINTS PR00091 Nitrogenase component II signature 86 100 6.8E-37 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PRINTS PR00091 Nitrogenase component II signature 124 139 6.8E-37 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PIRSF PIRSF000363 2 278 3.4E-121 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 22-04-2016 IPR030655 NifH/chlL conserved site AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 PANTHER PTHR13696 3 260 6.8E-146 T 22-04-2016 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 Gene3D G3DSA:3.40.50.300 5 272 1.9E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.994 T 22-04-2016 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 SUPERFAMILY SSF52540 4 279 4.08E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 278 9.6E-140 T 22-04-2016 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 ProSitePatterns PS00692 NifH/frxC family signature 2. 125 138 - T 22-04-2016 IPR030655 NifH/chlL conserved site AMK58_RS04665 26006a9db9ec32481b88e955ac8a201d 293 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 1.2E-135 T 22-04-2016 AMK58_RS12935 98fa6352744e3cdb027dbb2b62a94e11 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 166 6.4E-31 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AMK58_RS12935 98fa6352744e3cdb027dbb2b62a94e11 169 PANTHER PTHR35011 23 167 1.9E-29 T 22-04-2016 AMK58_RS12370 6671cd942e737b52de266e4a4517a799 481 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 325 467 4.5E-17 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMK58_RS12370 6671cd942e737b52de266e4a4517a799 481 Pfam PF01943 Polysaccharide biosynthesis protein 11 271 6.0E-29 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMK58_RS06120 31f72208de56daf55359f072ae80ce37 122 PANTHER PTHR11058 1 122 2.9E-67 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK58_RS06120 31f72208de56daf55359f072ae80ce37 122 PANTHER PTHR11058:SF10 1 122 2.9E-67 T 22-04-2016 AMK58_RS06120 31f72208de56daf55359f072ae80ce37 122 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 1.0E-41 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK58_RS06120 31f72208de56daf55359f072ae80ce37 122 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 20.638 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMK58_RS01565 53e602e545d3d5567e83075985fa1c53 992 SUPERFAMILY SSF52540 324 673 8.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01565 53e602e545d3d5567e83075985fa1c53 992 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 8 984 0.0 T 22-04-2016 IPR014153 Double-strand break repair protein AddB AMK58_RS01565 53e602e545d3d5567e83075985fa1c53 992 Pfam PF12705 PD-(D/E)XK nuclease superfamily 720 962 4.0E-22 T 22-04-2016 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 PANTHER PTHR24220:SF239 14 388 1.3E-172 T 22-04-2016 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 PANTHER PTHR24220 14 388 1.3E-172 T 22-04-2016 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 SUPERFAMILY SSF52540 258 491 5.79E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 Pfam PF00005 ABC transporter 29 173 2.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 Pfam PF00005 ABC transporter 278 435 4.2E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 SMART SM00382 37 229 3.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 SUPERFAMILY SSF52540 12 229 1.49E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 Gene3D G3DSA:3.40.50.300 260 493 8.2E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05900 88b384de677d50c866e6843a6feee763 520 Gene3D G3DSA:3.40.50.300 12 233 8.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 PIRSF PIRSF009320 1 206 5.4E-24 T 22-04-2016 AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 142 4.3E-14 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 Gene3D G3DSA:3.40.50.300 3 204 3.6E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 PANTHER PTHR13696 1 191 2.6E-17 T 22-04-2016 AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 PANTHER PTHR13696:SF54 1 191 2.6E-17 T 22-04-2016 AMK58_RS11865 aa4b53fa34294775db8bd54e9e0a3a71 207 SUPERFAMILY SSF52540 1 204 7.77E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05505 abc87daadb76741ebd9c0362811925d6 162 SUPERFAMILY SSF49503 55 161 5.01E-18 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS05505 abc87daadb76741ebd9c0362811925d6 162 Pfam PF13473 Cupredoxin-like domain 50 161 1.4E-8 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain AMK58_RS05505 abc87daadb76741ebd9c0362811925d6 162 Gene3D G3DSA:2.60.40.420 45 161 1.1E-17 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 Gene3D G3DSA:3.30.70.1230 450 638 3.6E-48 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 PANTHER PTHR11920 360 590 6.0E-47 T 22-04-2016 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 450 630 5.0E-34 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 SUPERFAMILY SSF55073 448 639 3.92E-58 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 Gene3D G3DSA:3.30.450.20 198 350 8.4E-8 T 22-04-2016 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 Pfam PF00672 HAMP domain 354 423 1.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 SMART SM00044 399 613 9.5E-17 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK58_RS01240 56a46067e480624f2a728ba6563ff013 657 PANTHER PTHR11920:SF257 360 590 6.0E-47 T 22-04-2016 AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 Gene3D G3DSA:3.30.420.40 132 276 9.5E-49 T 22-04-2016 AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 PANTHER PTHR18964:SF134 1 296 1.8E-81 T 22-04-2016 AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 Pfam PF00480 ROK family 3 298 2.0E-68 T 22-04-2016 IPR000600 ROK family AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 Gene3D G3DSA:3.30.420.40 2 131 3.9E-38 T 22-04-2016 AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 SUPERFAMILY SSF53067 2 296 5.5E-61 T 22-04-2016 AMK58_RS10575 875fbe8dbc7518636b20414faacf53fd 299 PANTHER PTHR18964 1 296 1.8E-81 T 22-04-2016 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 SMART SM01060 9 403 3.6E-237 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 130 148 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 295 322 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 22 45 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 90 108 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 327 353 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PRINTS PR00067 Catalase signature 111 128 1.17E-64 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 Gene3D G3DSA:2.40.180.10 3 363 9.4E-165 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PIRSF PIRSF038928 1 493 4.8E-171 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 SUPERFAMILY SSF56634 2 494 1.57E-185 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 PANTHER PTHR11465 1 489 5.8E-248 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 340 348 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 Pfam PF06628 Catalase-related immune-responsive 426 486 4.5E-17 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS13180 b0adddab2dc01777c73d9f8bb19de46d 564 Pfam PF00199 Catalase 9 398 6.1E-165 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMK58_RS05195 fd149f33724cb708bf2050f280e4b81f 63 Pfam PF13770 Domain of unknown function (DUF4169) 2 55 1.9E-21 T 22-04-2016 IPR025227 Protein of unknown function DUF4169 AMK58_RS01935 f33c2ba26f6a53f7cd4229ffe17c4df2 332 Pfam PF12224 Putative amidoligase enzyme 18 291 4.9E-56 T 22-04-2016 IPR022025 Putative amidoligase enzyme AMK58_RS03490 1df0892ba8dfd9b7f1f0be9cab0b862b 400 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 54 399 2.8E-152 T 22-04-2016 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system AMK58_RS03490 1df0892ba8dfd9b7f1f0be9cab0b862b 400 Pfam PF13458 Periplasmic binding protein 64 218 5.9E-9 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS03490 1df0892ba8dfd9b7f1f0be9cab0b862b 400 Gene3D G3DSA:3.40.50.2300 61 221 2.3E-12 T 22-04-2016 AMK58_RS03490 1df0892ba8dfd9b7f1f0be9cab0b862b 400 SUPERFAMILY SSF53822 59 364 1.04E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 SUPERFAMILY SSF52540 2 232 1.33E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 SMART SM00382 31 234 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 PANTHER PTHR24220:SF534 3 250 8.0E-111 T 22-04-2016 AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 Gene3D G3DSA:3.40.50.300 1 233 4.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 PANTHER PTHR24220 3 250 8.0E-111 T 22-04-2016 AMK58_RS05465 5592b4df6e36410158e0758d0e10d581 265 Pfam PF00005 ABC transporter 22 177 8.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS19530 991d5a3587bdc901ea07c5f01524cda4 120 Pfam PF00849 RNA pseudouridylate synthase 5 50 3.4E-9 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS19530 991d5a3587bdc901ea07c5f01524cda4 120 PANTHER PTHR11079 11 116 1.8E-30 T 22-04-2016 AMK58_RS19530 991d5a3587bdc901ea07c5f01524cda4 120 SUPERFAMILY SSF55120 10 116 1.15E-27 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS06595 774ca6e40745ec5528920d66269bea46 221 Gene3D G3DSA:3.90.226.10 57 162 1.3E-9 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS06595 774ca6e40745ec5528920d66269bea46 221 SUPERFAMILY SSF52096 57 177 9.94E-14 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS06595 774ca6e40745ec5528920d66269bea46 221 Pfam PF00574 Clp protease 86 163 8.5E-6 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK58_RS16365 e43fb8674d337e33f02d920d9ae4d045 68 Pfam PF00893 Small Multidrug Resistance protein 1 66 4.8E-22 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AMK58_RS16365 e43fb8674d337e33f02d920d9ae4d045 68 PANTHER PTHR30561 1 66 3.7E-26 T 22-04-2016 AMK58_RS16365 e43fb8674d337e33f02d920d9ae4d045 68 SUPERFAMILY SSF103481 2 67 1.44E-12 T 22-04-2016 AMK58_RS16365 e43fb8674d337e33f02d920d9ae4d045 68 PANTHER PTHR30561:SF1 1 66 3.7E-26 T 22-04-2016 AMK58_RS13280 a52f0cd4eaca20d593ae99b9bb0078d7 187 Pfam PF01965 DJ-1/PfpI family 8 175 8.5E-34 T 22-04-2016 IPR002818 DJ-1/PfpI AMK58_RS13280 a52f0cd4eaca20d593ae99b9bb0078d7 187 SUPERFAMILY SSF52317 8 176 7.84E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS13280 a52f0cd4eaca20d593ae99b9bb0078d7 187 PANTHER PTHR11019 1 184 4.5E-28 T 22-04-2016 AMK58_RS13280 a52f0cd4eaca20d593ae99b9bb0078d7 187 Gene3D G3DSA:3.40.50.880 3 182 2.6E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS13280 a52f0cd4eaca20d593ae99b9bb0078d7 187 PANTHER PTHR11019:SF115 1 184 4.5E-28 T 22-04-2016 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 PANTHER PTHR10010:SF14 1 249 1.8E-78 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 Gene3D G3DSA:1.20.58.220 3 112 3.7E-33 T 22-04-2016 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 PANTHER PTHR10010 1 249 1.8E-78 T 22-04-2016 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 Pfam PF01895 PhoU domain 21 108 3.4E-23 T 22-04-2016 IPR026022 PhoU domain AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 Pfam PF01895 PhoU domain 124 208 1.4E-20 T 22-04-2016 IPR026022 PhoU domain AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 SUPERFAMILY SSF109755 8 226 4.6E-72 T 22-04-2016 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 Gene3D G3DSA:1.20.58.220 124 222 4.3E-32 T 22-04-2016 AMK58_RS01050 74cc7c5b1e0d24ed608ef6f5d5e46ede 281 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 216 2.3E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK58_RS03655 a8eb06267b359865f78e28b4d6846626 101 Pfam PF13466 STAS domain 14 90 4.4E-14 T 22-04-2016 IPR002645 STAS domain AMK58_RS03655 a8eb06267b359865f78e28b4d6846626 101 SUPERFAMILY SSF52091 1 100 9.22E-21 T 22-04-2016 IPR002645 STAS domain AMK58_RS03655 a8eb06267b359865f78e28b4d6846626 101 Gene3D G3DSA:3.30.750.24 1 100 1.0E-20 T 22-04-2016 IPR002645 STAS domain AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Pfam PF14579 Helix-hairpin-helix motif 770 875 1.3E-21 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Gene3D G3DSA:3.20.20.140 11 238 6.9E-11 T 22-04-2016 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 274 696 4.1E-149 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 SUPERFAMILY SSF89550 12 108 6.28E-7 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 878 3.1E-153 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 PANTHER PTHR32294 1 789 0.0 T 22-04-2016 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 PANTHER PTHR32294 810 1017 0.0 T 22-04-2016 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 4 1066 13.941 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 PANTHER PTHR32294:SF4 1 789 0.0 T 22-04-2016 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 PANTHER PTHR32294:SF4 810 1017 0.0 T 22-04-2016 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Gene3D G3DSA:2.40.50.140 950 1022 4.0E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 SMART SM00481 5 72 4.4E-14 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK58_RS12035 b2c5a918250df68d6fe4f57b44b850ff 1066 Pfam PF02811 PHP domain 6 122 1.6E-9 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK58_RS08140 788ab6b9064dd09ec0b53591dae77212 290 Gene3D G3DSA:3.10.180.10 5 113 3.6E-11 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS08140 788ab6b9064dd09ec0b53591dae77212 290 Pfam PF13468 Glyoxalase-like domain 9 189 1.1E-37 T 22-04-2016 IPR025870 Glyoxalase-like domain AMK58_RS08140 788ab6b9064dd09ec0b53591dae77212 290 PANTHER PTHR40265 2 210 7.8E-18 T 22-04-2016 AMK58_RS08140 788ab6b9064dd09ec0b53591dae77212 290 SUPERFAMILY SSF54593 3 254 9.04E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS08140 788ab6b9064dd09ec0b53591dae77212 290 PANTHER PTHR40265:SF1 2 210 7.8E-18 T 22-04-2016 AMK58_RS05790 cb035907b0f5720519f34cc57165ca89 141 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 7 119 2.0E-6 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 AMK58_RS05790 cb035907b0f5720519f34cc57165ca89 141 PANTHER PTHR30353 10 140 8.5E-45 T 22-04-2016 IPR032818 DedA family AMK58_RS05790 cb035907b0f5720519f34cc57165ca89 141 Pfam PF09335 SNARE associated Golgi protein 25 140 3.1E-12 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS05790 cb035907b0f5720519f34cc57165ca89 141 PANTHER PTHR30353:SF12 10 140 8.5E-45 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 PANTHER PTHR11493 13 305 2.9E-150 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 PANTHER PTHR11493 338 561 2.9E-150 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 SUPERFAMILY SSF55124 11 137 9.98E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 PANTHER PTHR11493:SF47 13 305 2.9E-150 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 PANTHER PTHR11493:SF47 338 561 2.9E-150 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Gene3D G3DSA:3.30.413.10 419 559 2.0E-36 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 122 2.1E-19 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 345 409 8.4E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 130 283 1.5E-41 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 426 558 2.2E-14 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Gene3D G3DSA:3.90.480.10 332 413 1.7E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Gene3D G3DSA:3.90.480.10 59 128 1.7E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 Gene3D G3DSA:3.30.413.10 131 284 5.4E-43 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 SUPERFAMILY SSF55124 263 287 4.42E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 SUPERFAMILY SSF55124 326 432 4.42E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 SUPERFAMILY SSF56014 131 285 1.44E-45 T 22-04-2016 AMK58_RS08220 16d944b07f9db2912dd55fc624192d4a 562 SUPERFAMILY SSF56014 419 558 1.09E-38 T 22-04-2016 AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 PANTHER PTHR13903:SF4 15 300 4.1E-119 T 22-04-2016 AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 PIRSF PIRSF006232 14 293 7.8E-85 T 22-04-2016 IPR012093 Pirin AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 Pfam PF05726 Pirin C-terminal cupin domain 187 286 3.6E-27 T 22-04-2016 IPR008778 Pirin, C-terminal domain AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 PANTHER PTHR13903 15 300 4.1E-119 T 22-04-2016 IPR012093 Pirin AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 Gene3D G3DSA:2.60.120.10 21 258 2.1E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 Pfam PF02678 Pirin 29 134 9.3E-32 T 22-04-2016 IPR003829 Pirin, N-terminal domain AMK58_RS12680 66f38b478ab9ff8efeb35b6fd96bddd8 300 SUPERFAMILY SSF51182 17 297 2.68E-83 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 Pfam PF00682 HMGL-like 8 264 1.8E-84 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 PANTHER PTHR10277 8 372 3.4E-140 T 22-04-2016 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 193 206 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 SUPERFAMILY SSF51569 3 281 1.28E-85 T 22-04-2016 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 Gene3D G3DSA:3.20.20.70 5 336 1.7E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 PANTHER PTHR10277:SF45 8 372 3.4E-140 T 22-04-2016 AMK58_RS04580 da645c68b0bb68c62bdf8d5f657100ec 381 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 7 369 2.2E-161 T 22-04-2016 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 Pfam PF00501 AMP-binding enzyme 8 309 7.4E-64 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 PANTHER PTHR24095 1 313 9.7E-176 T 22-04-2016 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 Gene3D G3DSA:3.40.50.980 168 296 2.2E-25 T 22-04-2016 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 SUPERFAMILY SSF56801 5 312 2.75E-93 T 22-04-2016 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 Gene3D G3DSA:3.40.50.980 9 167 3.5E-40 T 22-04-2016 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 PANTHER PTHR24095:SF178 1 313 9.7E-176 T 22-04-2016 AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 PRINTS PR00154 AMP-binding signature 157 168 6.5E-5 T 22-04-2016 IPR020459 AMP-binding AMK58_RS26965 73aee8f8b08e91b18cdb3f6d4f5f8f83 313 PRINTS PR00154 AMP-binding signature 169 177 6.5E-5 T 22-04-2016 IPR020459 AMP-binding AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 420 447 2500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 452 489 5000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 573 594 6200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 339 361 700.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 317 338 930.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 391 413 13.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 363 390 2000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SMART SM00710 491 513 2400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 PANTHER PTHR36453 266 650 1.5E-16 T 22-04-2016 AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 Gene3D G3DSA:2.160.20.10 19 120 3.7E-9 T 22-04-2016 IPR012334 Pectin lyase fold AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 Gene3D G3DSA:2.160.20.10 287 528 9.2E-21 T 22-04-2016 IPR012334 Pectin lyase fold AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 Gene3D G3DSA:2.160.20.10 571 635 9.2E-21 T 22-04-2016 IPR012334 Pectin lyase fold AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SUPERFAMILY SSF51126 282 563 9.53E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SUPERFAMILY SSF51126 605 637 9.53E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 SUPERFAMILY SSF51126 16 121 9.53E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 PANTHER PTHR36453:SF1 266 650 1.5E-16 T 22-04-2016 AMK58_RS12410 2dd1d932c1d8ba3a501b2045a63340d7 650 Pfam PF13229 Right handed beta helix region 290 429 4.2E-13 T 22-04-2016 AMK58_RS10165 51a32eab83f992ba238f8ed51ecbbcbf 260 Pfam PF13144 Chaperone for flagella basal body P-ring formation 54 252 3.7E-37 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMK58_RS10165 51a32eab83f992ba238f8ed51ecbbcbf 260 PANTHER PTHR36307 96 253 6.5E-20 T 22-04-2016 AMK58_RS10165 51a32eab83f992ba238f8ed51ecbbcbf 260 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 119 252 1.8E-33 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMK58_RS10165 51a32eab83f992ba238f8ed51ecbbcbf 260 SMART SM00858 129 191 1.5E-7 T 22-04-2016 IPR013974 SAF domain AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 SUPERFAMILY SSF141571 170 275 1.83E-23 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 SUPERFAMILY SSF141571 283 429 1.1E-34 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 SUPERFAMILY SSF141571 39 128 2.22E-23 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 PANTHER PTHR14136:SF0 280 369 4.5E-47 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 PANTHER PTHR14136:SF0 40 245 4.5E-47 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 324 361 3.6E-12 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 284 321 3.3E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 205 244 1.2E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 171 204 6.4E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 380 417 1.1E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 45 84 2.1E-9 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 Pfam PF00805 Pentapeptide repeats (8 copies) 86 123 5.0E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 PANTHER PTHR14136 280 369 4.5E-47 T 22-04-2016 AMK58_RS08685 1885eb46993b4d077f7fa54c306846a0 435 PANTHER PTHR14136 40 245 4.5E-47 T 22-04-2016 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 SUPERFAMILY SSF52518 200 454 8.1E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 PANTHER PTHR32154 410 540 4.9E-113 T 22-04-2016 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 PANTHER PTHR32154 1 381 4.9E-113 T 22-04-2016 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 Gene3D G3DSA:3.40.50.970 194 383 4.2E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 PANTHER PTHR32154:SF20 410 540 4.9E-113 T 22-04-2016 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 PANTHER PTHR32154:SF20 1 381 4.9E-113 T 22-04-2016 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 Gene3D G3DSA:3.40.920.10 6 181 4.4E-22 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 Gene3D G3DSA:3.40.50.920 470 534 3.5E-14 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 6 568 6.9E-165 T 22-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 SUPERFAMILY SSF53323 6 222 1.44E-24 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 SUPERFAMILY SSF52922 469 567 3.28E-15 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 175 7.0E-23 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK58_RS13295 27e02a1366978caa5dbf2bd77ec1adbc 573 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 212 446 5.6E-52 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 Gene3D G3DSA:3.40.640.10 50 261 3.7E-54 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 Gene3D G3DSA:3.90.1150.10 262 390 1.1E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 Pfam PF00155 Aminotransferase class I and II 36 388 2.2E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 SUPERFAMILY SSF53383 13 389 2.24E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS06590 b7bff12e11e8e8252869f0712168a4ac 393 PANTHER PTHR11751 17 390 2.5E-80 T 22-04-2016 AMK58_RS00420 495fd35e967da83bdb261eec46a1f827 282 Pfam PF03618 Kinase/pyrophosphorylase 6 261 1.2E-95 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMK58_RS00420 495fd35e967da83bdb261eec46a1f827 282 PANTHER PTHR31756 1 279 2.7E-100 T 22-04-2016 AMK58_RS00420 495fd35e967da83bdb261eec46a1f827 282 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 267 56.86 T 22-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AMK58_RS00420 495fd35e967da83bdb261eec46a1f827 282 PANTHER PTHR31756:SF3 1 279 2.7E-100 T 22-04-2016 AMK58_RS05875 4288f71886cfaafbcdf3a111b8ed5222 232 SUPERFAMILY SSF160909 1 227 3.79E-78 T 22-04-2016 AMK58_RS05875 4288f71886cfaafbcdf3a111b8ed5222 232 PANTHER PTHR21013 1 229 1.9E-70 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMK58_RS05875 4288f71886cfaafbcdf3a111b8ed5222 232 Gene3D G3DSA:3.30.2180.10 1 59 2.7E-21 T 22-04-2016 AMK58_RS05875 4288f71886cfaafbcdf3a111b8ed5222 232 Gene3D G3DSA:1.10.3580.10 62 229 6.3E-56 T 22-04-2016 IPR023335 Orthogonal Bundle domain in ATP12 AMK58_RS05875 4288f71886cfaafbcdf3a111b8ed5222 232 Pfam PF07542 ATP12 chaperone protein 2 120 2.6E-37 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMK58_RS09900 5cb6a39ae3e67d1b5c3c91910625ed3e 196 Pfam PF00583 Acetyltransferase (GNAT) family 67 169 2.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS09900 5cb6a39ae3e67d1b5c3c91910625ed3e 196 PANTHER PTHR23091 1 83 2.7E-22 T 22-04-2016 AMK58_RS09900 5cb6a39ae3e67d1b5c3c91910625ed3e 196 PANTHER PTHR23091 110 174 2.7E-22 T 22-04-2016 AMK58_RS09900 5cb6a39ae3e67d1b5c3c91910625ed3e 196 Gene3D G3DSA:3.40.630.30 6 181 8.3E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS09900 5cb6a39ae3e67d1b5c3c91910625ed3e 196 SUPERFAMILY SSF55729 4 178 2.16E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 Gene3D G3DSA:3.30.1330.60 329 444 3.2E-20 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 PANTHER PTHR30329 244 447 5.8E-35 T 22-04-2016 AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 PANTHER PTHR30329 122 201 5.8E-35 T 22-04-2016 AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 Pfam PF09850 Type VI secretion system protein DotU 64 265 4.8E-55 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 63 272 3.4E-54 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 Pfam PF00691 OmpA family 341 438 9.3E-9 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 SUPERFAMILY SSF103088 331 446 8.11E-20 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 PANTHER PTHR30329:SF7 244 447 5.8E-35 T 22-04-2016 AMK58_RS12960 dda9c66e213d4bdfae2a48703e3ed44c 447 PANTHER PTHR30329:SF7 122 201 5.8E-35 T 22-04-2016 AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 SMART SM00487 51 268 1.1E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 PANTHER PTHR30195 56 455 3.2E-59 T 22-04-2016 AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 Gene3D G3DSA:3.40.50.300 51 136 2.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 Gene3D G3DSA:3.40.50.300 180 240 2.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 SUPERFAMILY SSF52540 39 272 1.17E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 Pfam PF04851 Type III restriction enzyme, res subunit 54 233 1.0E-41 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 Gene3D G3DSA:3.40.50.300 315 438 1.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 PANTHER PTHR30195:SF3 56 455 3.2E-59 T 22-04-2016 AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 SUPERFAMILY SSF52540 307 439 1.06E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS20470 f871dfdfe5c5a7312ad520a0215e404b 556 SUPERFAMILY SSF52540 189 230 1.06E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08460 627049e01243b7a434a9d6a41ad7e705 137 Pfam PF00072 Response regulator receiver domain 18 129 1.9E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08460 627049e01243b7a434a9d6a41ad7e705 137 SUPERFAMILY SSF52172 16 135 1.14E-16 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08460 627049e01243b7a434a9d6a41ad7e705 137 SMART SM00448 16 129 3.0E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08460 627049e01243b7a434a9d6a41ad7e705 137 Gene3D G3DSA:3.40.50.2300 15 135 1.5E-14 T 22-04-2016 AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 PANTHER PTHR12145 1 240 2.4E-115 T 22-04-2016 AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 Gene3D G3DSA:3.40.30.10 19 146 1.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 SUPERFAMILY SSF48208 188 240 1.87E-7 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 PANTHER PTHR12145:SF11 1 240 2.4E-115 T 22-04-2016 AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 Pfam PF03190 Protein of unknown function, DUF255 2 162 9.2E-73 T 22-04-2016 IPR004879 Domain of unknown function DUF255 AMK58_RS25305 71523904ec76476432f00b64736b5c80 240 SUPERFAMILY SSF52833 2 128 4.32E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00550 bfae46cf90c26afff15e21297ea3bdfe 228 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 124 226 5.5E-28 T 22-04-2016 IPR003741 LUD domain AMK58_RS00550 bfae46cf90c26afff15e21297ea3bdfe 228 SUPERFAMILY SSF100950 47 227 5.02E-42 T 22-04-2016 AMK58_RS00550 bfae46cf90c26afff15e21297ea3bdfe 228 Gene3D G3DSA:3.40.50.10420 48 227 9.2E-45 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK58_RS00550 bfae46cf90c26afff15e21297ea3bdfe 228 PANTHER PTHR32479:SF11 105 228 7.1E-24 T 22-04-2016 AMK58_RS00550 bfae46cf90c26afff15e21297ea3bdfe 228 PANTHER PTHR32479 105 228 7.1E-24 T 22-04-2016 AMK58_RS01510 aff3f252996d3d065c1b00ea007b842b 229 Gene3D G3DSA:1.10.3720.10 8 222 6.1E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01510 aff3f252996d3d065c1b00ea007b842b 229 SUPERFAMILY SSF161098 11 207 2.62E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01510 aff3f252996d3d065c1b00ea007b842b 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 222 5.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01510 aff3f252996d3d065c1b00ea007b842b 229 PANTHER PTHR30614 1 227 3.3E-82 T 22-04-2016 AMK58_RS01510 aff3f252996d3d065c1b00ea007b842b 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 8.1E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 Gene3D G3DSA:3.40.50.300 4 223 6.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 SMART SM00382 34 215 6.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 PANTHER PTHR24220 5 261 4.0E-98 T 22-04-2016 AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 Pfam PF00005 ABC transporter 28 164 9.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 SUPERFAMILY SSF52540 4 235 2.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01900 973b6721f14975bf2fe22e2d7dd6620f 262 PANTHER PTHR24220:SF457 5 261 4.0E-98 T 22-04-2016 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 Gene3D G3DSA:1.10.260.40 28 89 2.7E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 PANTHER PTHR10245 1 91 2.8E-35 T 22-04-2016 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 SUPERFAMILY SSF47413 16 93 1.61E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 Pfam PF01381 Helix-turn-helix 33 85 5.8E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 SMART SM00530 31 86 1.4E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS00725 a1783a9d8cf0310c44f6dbb4c6f660a3 162 PANTHER PTHR10245:SF38 1 91 2.8E-35 T 22-04-2016 AMK58_RS09875 a99bd727f283a43823387de7fdfd6f6d 106 PANTHER PTHR37827 16 106 3.5E-14 T 22-04-2016 AMK58_RS09875 a99bd727f283a43823387de7fdfd6f6d 106 PANTHER PTHR37827:SF1 16 106 3.5E-14 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SMART SM00388 100 183 4.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Gene3D G3DSA:3.30.565.10 196 336 8.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 PANTHER PTHR24423 103 128 5.1E-66 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Gene3D G3DSA:1.10.287.130 100 178 1.9E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Gene3D G3DSA:3.40.50.2300 364 489 8.7E-24 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 PANTHER PTHR24423:SF439 147 484 5.1E-66 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 102 183 9.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SUPERFAMILY SSF55874 198 338 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SMART SM00387 227 336 0.0014 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Pfam PF00072 Response regulator receiver domain 368 480 2.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 333 2.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 PANTHER PTHR24423 147 484 5.1E-66 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SUPERFAMILY SSF47384 101 183 1.39E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 PANTHER PTHR24423:SF439 103 128 5.1E-66 T 22-04-2016 AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SUPERFAMILY SSF52172 364 489 1.34E-23 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03740 79ad76b6bba90a15d2c4042c67491eda 491 SMART SM00448 366 480 4.7E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 35 570 1.8E-177 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 Pfam PF00005 ABC transporter 362 509 6.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 PANTHER PTHR24222:SF0 25 576 9.8E-176 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 SUPERFAMILY SSF90123 30 334 4.05E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 Pfam PF00664 ABC transporter transmembrane region 40 295 1.9E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 SUPERFAMILY SSF52540 336 570 1.45E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 Gene3D G3DSA:1.20.1560.10 34 329 1.0E-34 T 22-04-2016 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 SMART SM00382 371 557 8.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 Gene3D G3DSA:3.40.50.300 352 570 3.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04950 dd0d1ed82a65d2d4034f1ebf79323bb4 585 PANTHER PTHR24222 25 576 9.8E-176 T 22-04-2016 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 SUPERFAMILY SSF52964 39 174 7.85E-44 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Gene3D G3DSA:2.130.10.10 166 447 2.8E-79 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Gene3D G3DSA:3.40.50.10070 33 165 1.1E-52 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 PANTHER PTHR36842 17 449 1.1E-50 T 22-04-2016 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 SUPERFAMILY SSF69304 171 447 5.62E-58 T 22-04-2016 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 28 446 2.5E-143 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Hamap MF_00671 Protein TolB [tolB]. 15 445 32.218 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Pfam PF04052 TolB amino-terminal domain 34 141 1.1E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Pfam PF07676 WD40-like Beta Propeller Repeat 339 370 3.9E-7 T 22-04-2016 IPR011659 WD40-like Beta Propeller AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Pfam PF07676 WD40-like Beta Propeller Repeat 295 330 2.7E-12 T 22-04-2016 IPR011659 WD40-like Beta Propeller AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Pfam PF07676 WD40-like Beta Propeller Repeat 259 285 0.002 T 22-04-2016 IPR011659 WD40-like Beta Propeller AMK58_RS09265 0e7805523dff2e7afcb4ff55eeda3339 450 Pfam PF07676 WD40-like Beta Propeller Repeat 382 415 0.0071 T 22-04-2016 IPR011659 WD40-like Beta Propeller AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 2.2E-14 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 2.2E-14 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.2E-14 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 2.2E-14 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 296 8.0E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PANTHER PTHR22912 1 312 4.6E-95 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 Gene3D G3DSA:3.50.50.60 130 248 4.9E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 208 224 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 3.44E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 Gene3D G3DSA:3.50.50.60 252 321 1.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 Gene3D G3DSA:3.50.50.60 6 128 1.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 PANTHER PTHR22912:SF158 1 312 4.6E-95 T 22-04-2016 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 Hamap MF_01685 Ferredoxin--NADP reductase. 7 334 41.498 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 AMK58_RS01590 8ce435e3068ce2c434fcc7c168cfc6b3 340 SUPERFAMILY SSF51905 8 316 3.42E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 SMART SM00304 214 267 1.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PANTHER PTHR32089 281 560 2.5E-141 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PANTHER PTHR32089 164 249 2.5E-141 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 SMART SM00283 303 557 1.4E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 Pfam PF00672 HAMP domain 194 263 1.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 SUPERFAMILY SSF58104 309 556 4.19E-62 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 SUPERFAMILY SSF58104 243 269 4.19E-62 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 556 8.3E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 5.4E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 5.4E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 5.4E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 5.4E-24 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 1.2E-8 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PANTHER PTHR32089:SF40 281 560 2.5E-141 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 PANTHER PTHR32089:SF40 164 249 2.5E-141 T 22-04-2016 AMK58_RS09990 afe86c1e6c6d18a10c8c0288f0a63b5d 563 Gene3D G3DSA:1.10.287.950 320 527 1.1E-44 T 22-04-2016 AMK58_RS04715 6e02b8c07103f42f3eeb1fe5df16b269 69 SUPERFAMILY SSF159203 1 65 2.22E-25 T 22-04-2016 IPR024044 NifT/FixU barrel-like domain AMK58_RS04715 6e02b8c07103f42f3eeb1fe5df16b269 69 Pfam PF06988 NifT/FixU protein 1 63 2.1E-28 T 22-04-2016 IPR009727 NifT/FixU GO:0009399 AMK58_RS04715 6e02b8c07103f42f3eeb1fe5df16b269 69 Gene3D G3DSA:2.40.50.240 1 65 3.4E-33 T 22-04-2016 IPR024044 NifT/FixU barrel-like domain AMK58_RS04715 6e02b8c07103f42f3eeb1fe5df16b269 69 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 1 65 2.8E-32 T 22-04-2016 IPR009727 NifT/FixU GO:0009399 AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 Pfam PF00850 Histone deacetylase domain 20 306 6.5E-85 T 22-04-2016 IPR023801 Histone deacetylase domain AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 PANTHER PTHR10625 1 307 1.4E-104 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 SUPERFAMILY SSF52768 1 307 3.02E-104 T 22-04-2016 AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 Gene3D G3DSA:3.40.800.20 2 307 2.5E-105 T 22-04-2016 IPR023801 Histone deacetylase domain AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS06875 81997ba99cb7d2530942b21890847d79 309 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 1.9E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS04065 6b8069aeb8965bf7f8e2f1961235c8bc 247 PANTHER PTHR18895:SF75 8 236 5.4E-36 T 22-04-2016 AMK58_RS04065 6b8069aeb8965bf7f8e2f1961235c8bc 247 PANTHER PTHR18895 8 236 5.4E-36 T 22-04-2016 AMK58_RS04065 6b8069aeb8965bf7f8e2f1961235c8bc 247 Gene3D G3DSA:3.40.50.150 29 240 1.4E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04065 6b8069aeb8965bf7f8e2f1961235c8bc 247 Pfam PF05175 Methyltransferase small domain 31 168 9.1E-13 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK58_RS04065 6b8069aeb8965bf7f8e2f1961235c8bc 247 SUPERFAMILY SSF53335 15 209 1.03E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 3.8E-170 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 Gene3D G3DSA:3.40.605.10 18 271 6.3E-95 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 Gene3D G3DSA:3.40.309.10 272 469 6.1E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 AMK58_RS03455 4e12386a55959fed5ffcbfff04281328 506 SUPERFAMILY SSF53720 11 498 1.01E-166 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK58_RS22165 1a69a3435af3f8a36f7e4d61025f2c4d 337 PANTHER PTHR10584:SF153 106 336 5.0E-67 T 22-04-2016 AMK58_RS22165 1a69a3435af3f8a36f7e4d61025f2c4d 337 SUPERFAMILY SSF53613 123 336 1.55E-46 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS22165 1a69a3435af3f8a36f7e4d61025f2c4d 337 Gene3D G3DSA:3.40.1190.20 118 337 1.3E-39 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS22165 1a69a3435af3f8a36f7e4d61025f2c4d 337 Pfam PF00294 pfkB family carbohydrate kinase 175 337 1.1E-21 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK58_RS22165 1a69a3435af3f8a36f7e4d61025f2c4d 337 PANTHER PTHR10584 106 336 5.0E-67 T 22-04-2016 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 SUPERFAMILY SSF54862 9 85 1.16E-12 T 22-04-2016 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 Gene3D G3DSA:3.30.70.20 16 75 5.1E-8 T 22-04-2016 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 PANTHER PTHR10617 4 94 5.3E-22 T 22-04-2016 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 PANTHER PTHR10617:SF119 4 94 5.3E-22 T 22-04-2016 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 16 92 6.4E-6 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AMK58_RS04550 c8eaf32d4f2fc7a12a6c069025252225 94 PIRSF PIRSF036548 1 94 1.8E-43 T 22-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 Gene3D G3DSA:2.60.120.10 447 574 2.2E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 SMART SM00100 457 572 7.7E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 484 500 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 PANTHER PTHR16254:SF17 1 417 7.0E-197 T 22-04-2016 AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 SUPERFAMILY SSF51206 447 571 1.31E-29 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 Pfam PF00999 Sodium/hydrogen exchanger family 14 397 1.6E-69 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 Pfam PF00027 Cyclic nucleotide-binding domain 478 557 4.8E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS08235 4841544a42718c60e873dac6edaf0f44 592 PANTHER PTHR16254 1 417 7.0E-197 T 22-04-2016 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 412 147.971 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 Pfam PF01960 ArgJ family 24 412 9.1E-137 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 PANTHER PTHR23100:SF0 21 412 4.7E-164 T 22-04-2016 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 SUPERFAMILY SSF56266 19 408 1.31E-132 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 410 6.0E-107 T 22-04-2016 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 Gene3D G3DSA:3.60.70.12 17 284 9.4E-94 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 PANTHER PTHR23100 21 412 4.7E-164 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS12890 13f7ec3add30a19898435a918987dc48 412 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 412 5.2E-115 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK58_RS11585 1bc3cf2eca752fd73e23ec4f06382ab0 144 Gene3D G3DSA:3.10.450.50 5 128 3.6E-36 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS11585 1bc3cf2eca752fd73e23ec4f06382ab0 144 PANTHER PTHR34957 8 129 3.2E-30 T 22-04-2016 AMK58_RS11585 1bc3cf2eca752fd73e23ec4f06382ab0 144 SUPERFAMILY SSF54427 5 124 3.6E-32 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS11585 1bc3cf2eca752fd73e23ec4f06382ab0 144 Pfam PF13474 SnoaL-like domain 12 120 2.9E-20 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 Pfam PF00037 4Fe-4S binding domain 4 26 9.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 Gene3D G3DSA:3.30.70.20 5 60 6.9E-14 T 22-04-2016 AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 SUPERFAMILY SSF54862 5 61 9.27E-14 T 22-04-2016 AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 PANTHER PTHR24960 4 62 5.9E-12 T 22-04-2016 AMK58_RS04745 280517e9423afbc13d4980a4224e7dad 63 PANTHER PTHR24960:SF38 4 62 5.9E-12 T 22-04-2016 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 PANTHER PTHR11918:SF45 11 377 1.9E-114 T 22-04-2016 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 SMART SM00729 136 354 4.1E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 Pfam PF00919 Uncharacterized protein family UPF0004 11 95 3.1E-17 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 Pfam PF04055 Radical SAM superfamily 141 313 1.1E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 PANTHER PTHR11918 11 377 1.9E-114 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 409 2.0E-103 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 Gene3D G3DSA:3.80.30.20 134 360 5.0E-67 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 11 389 2.4E-130 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AMK58_RS02470 d969edc1d6ae7a007d35109a7dcfd10d 419 SUPERFAMILY SSF102114 115 358 5.23E-56 T 22-04-2016 AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 SUPERFAMILY SSF54862 47 68 2.44E-9 T 22-04-2016 AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 SUPERFAMILY SSF54862 115 189 2.44E-9 T 22-04-2016 AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 Pfam PF12801 4Fe-4S binding domain 38 76 2.4E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 PANTHER PTHR24960 9 196 4.5E-61 T 22-04-2016 AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 PANTHER PTHR24960:SF45 9 196 4.5E-61 T 22-04-2016 AMK58_RS28725 1347bfbbf6e411a47d4a449f276d481a 208 Pfam PF13746 4Fe-4S dicluster domain 160 199 2.5E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 19 250 1.9E-61 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 PANTHER PTHR21485 19 259 6.0E-89 T 22-04-2016 AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 PANTHER PTHR21485:SF4 19 259 6.0E-89 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 Pfam PF02348 Cytidylyltransferase 19 231 1.3E-39 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 Gene3D G3DSA:3.90.550.10 19 259 8.3E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 16 257 34.628 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK58_RS11910 f12e49634c984188b0578ee0a3184089 262 SUPERFAMILY SSF53448 19 259 1.62E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 Pfam PF03109 ABC1 family 109 227 2.8E-33 T 22-04-2016 IPR004147 UbiB domain AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 PANTHER PTHR10566:SF79 7 436 3.5E-176 T 22-04-2016 AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 SUPERFAMILY SSF56112 190 429 1.7E-39 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 SUPERFAMILY SSF56112 92 155 1.7E-39 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 PANTHER PTHR10566 7 436 3.5E-176 T 22-04-2016 AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 9 438 5.8E-171 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 Gene3D G3DSA:3.90.1200.10 33 73 5.1E-12 T 22-04-2016 AMK58_RS00870 05cdbb446dfc9041f9d7adc5eb42c898 512 Gene3D G3DSA:3.90.1200.10 233 312 5.1E-12 T 22-04-2016 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 PANTHER PTHR30372:SF3 6 354 3.6E-114 T 22-04-2016 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 381 8.3E-85 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 PANTHER PTHR30372 6 354 3.6E-114 T 22-04-2016 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 Gene3D G3DSA:3.40.50.2000 162 352 1.4E-9 T 22-04-2016 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 Pfam PF02684 Lipid-A-disaccharide synthetase 6 353 1.0E-101 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 SUPERFAMILY SSF53756 6 359 8.79E-28 T 22-04-2016 AMK58_RS06330 d5e5398555c660a7503850287dd437e4 406 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 381 34.822 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 59 164 2.2E-47 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 PANTHER PTHR23133:SF2 30 164 3.2E-72 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 89 102 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 Gene3D G3DSA:3.30.230.40 30 117 1.8E-37 T 22-04-2016 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 SUPERFAMILY SSF54211 30 114 3.92E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 SUPERFAMILY SSF54211 115 164 5.12E-16 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 Gene3D G3DSA:3.30.230.40 118 164 4.2E-9 T 22-04-2016 AMK58_RS25350 8c49af04468379dfcc68253a2da9c37e 164 PANTHER PTHR23133 30 164 3.2E-72 T 22-04-2016 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 SUPERFAMILY SSF53383 23 386 5.09E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 387 3.8E-143 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 PANTHER PTHR11808 3 390 1.8E-173 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 Gene3D G3DSA:3.40.640.10 7 256 9.5E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 PANTHER PTHR11808:SF45 3 390 1.8E-173 T 22-04-2016 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 PIRSF PIRSF001434 1 389 8.5E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 Gene3D G3DSA:3.90.1150.10 257 387 2.2E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS07655 48ed9a19cd5b1259a7e4353d71cf9232 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 385 8.4E-107 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK58_RS11250 0771b0a1af5b01b49b6ec37985c46cd7 227 Pfam PF01930 Domain of unknown function DUF83 14 191 7.1E-34 T 22-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 AMK58_RS11250 0771b0a1af5b01b49b6ec37985c46cd7 227 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 13 191 6.2E-42 T 22-04-2016 IPR013343 CRISPR-associated protein Cas4 AMK58_RS11250 0771b0a1af5b01b49b6ec37985c46cd7 227 PANTHER PTHR36531 1 200 7.4E-18 T 22-04-2016 AMK58_RS07590 836e1dd2db5ce3b2b1568f725ef5ac52 472 Pfam PF16980 Putative citrate transport 31 471 1.1E-193 T 22-04-2016 IPR031566 Putative citrate transporter AMK58_RS08160 ecf989b30d6089034badfce3f221868a 102 Gene3D G3DSA:3.30.1050.10 6 101 4.3E-22 T 22-04-2016 IPR003033 SCP2 sterol-binding domain AMK58_RS08160 ecf989b30d6089034badfce3f221868a 102 Pfam PF02036 SCP-2 sterol transfer family 5 101 3.6E-18 T 22-04-2016 IPR003033 SCP2 sterol-binding domain AMK58_RS08160 ecf989b30d6089034badfce3f221868a 102 PANTHER PTHR24314:SF13 50 102 8.5E-14 T 22-04-2016 AMK58_RS08160 ecf989b30d6089034badfce3f221868a 102 SUPERFAMILY SSF55718 15 101 5.05E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain AMK58_RS08160 ecf989b30d6089034badfce3f221868a 102 PANTHER PTHR24314 50 102 8.5E-14 T 22-04-2016 AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 SUPERFAMILY SSF102712 158 233 4.05E-6 T 22-04-2016 AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 Gene3D G3DSA:3.40.140.10 143 267 2.0E-50 T 22-04-2016 AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 TIGRFAM TIGR00608 radc: DNA repair protein RadC 52 267 6.4E-65 T 22-04-2016 IPR001405 RadC protein AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 216 221 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 Pfam PF04002 RadC-like JAB domain 147 265 2.8E-44 T 22-04-2016 IPR025657 RadC-like JAB domain AMK58_RS11400 e63adfd3315404e842bed88e8cdcd516 267 PANTHER PTHR30471 36 267 3.4E-71 T 22-04-2016 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 13 98 3.1E-15 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 PANTHER PTHR34653 5 99 1.5E-17 T 22-04-2016 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 Pfam PF02049 Flagellar hook-basal body complex protein FliE 14 99 4.6E-23 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 97 5.8E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 63 79 5.8E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK58_RS10070 94ab4507049f0815767fd441a1504263 99 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 99 15.216 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 PANTHER PTHR10160 1 381 1.7E-170 T 22-04-2016 AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 SMART SM01002 154 321 9.8E-87 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 SMART SM01003 4 145 4.7E-65 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 145 7.6E-42 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 Gene3D G3DSA:3.40.50.1770 2 195 5.1E-62 T 22-04-2016 AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 149 377 6.4E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 SUPERFAMILY SSF51735 145 327 8.69E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 SUPERFAMILY SSF52283 1 176 2.21E-50 T 22-04-2016 AMK58_RS05380 f84d5297ff8875efe2754b41dc62cfb7 385 Gene3D G3DSA:3.40.50.1770 196 376 7.4E-37 T 22-04-2016 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 SUPERFAMILY SSF55486 4 496 3.57E-110 T 22-04-2016 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PANTHER PTHR34217:SF1 1 496 4.9E-201 T 22-04-2016 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PIRSF PIRSF006615 1 498 9.4E-165 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 332 351 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 147 167 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 378 395 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 1.6E-46 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 485 2.4E-73 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK58_RS09505 4a977bda6b9c278df2a7667e61665c8f 498 PANTHER PTHR34217 1 496 4.9E-201 T 22-04-2016 AMK58_RS06370 5d778eb1c4539e92408261fdf801b2cb 738 PANTHER PTHR30619 47 560 8.5E-63 T 22-04-2016 AMK58_RS06370 5d778eb1c4539e92408261fdf801b2cb 738 PANTHER PTHR30619:SF2 47 560 8.5E-63 T 22-04-2016 AMK58_RS06370 5d778eb1c4539e92408261fdf801b2cb 738 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 288 481 3.1E-25 T 22-04-2016 IPR004477 ComEC/Rec2-related protein AMK58_RS06370 5d778eb1c4539e92408261fdf801b2cb 738 Pfam PF03772 Competence protein 267 550 2.0E-60 T 22-04-2016 IPR004477 ComEC/Rec2-related protein AMK58_RS06370 5d778eb1c4539e92408261fdf801b2cb 738 Pfam PF13567 Domain of unknown function (DUF4131) 56 221 2.1E-14 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 SUPERFAMILY SSF46785 4 85 3.53E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 PIRSF PIRSF005485 2 346 4.4E-109 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 7 344 8.5E-97 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 Pfam PF01628 HrcA protein C terminal domain 107 331 8.5E-57 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 4 338 28.686 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 SUPERFAMILY SSF55781 75 345 6.47E-55 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 Gene3D G3DSA:3.30.450.40 179 344 9.1E-34 T 22-04-2016 IPR029016 GAF domain-like AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 PANTHER PTHR34824 1 345 3.9E-103 T 22-04-2016 AMK58_RS13785 127f33bd0bf98ee2e0f8a272702be820 346 Gene3D G3DSA:1.10.10.10 2 86 2.0E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 SMART SM00115 32 270 0.0091 T 22-04-2016 IPR015917 Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 PANTHER PTHR22576:SF30 1 270 1.8E-86 T 22-04-2016 AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 Pfam PF00656 Caspase domain 41 268 5.6E-27 T 22-04-2016 AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 Pfam PF08239 Bacterial SH3 domain 591 635 1.3E-7 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 Gene3D G3DSA:3.40.50.1460 39 249 4.3E-14 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 SUPERFAMILY SSF52129 33 270 3.44E-45 T 22-04-2016 IPR029030 Caspase-like domain AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 PANTHER PTHR22576 1 270 1.8E-86 T 22-04-2016 AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 SUPERFAMILY SSF56436 685 914 1.74E-62 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 Gene3D G3DSA:3.90.1580.10 679 914 5.0E-61 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS10665 ec9a07b76d7eb1aebb55b1fac8bcf97b 915 Pfam PF03781 Sulfatase-modifying factor enzyme 1 686 912 1.5E-56 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 379 556 5.9E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 PANTHER PTHR32089:SF40 281 560 3.2E-148 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 PANTHER PTHR32089:SF40 193 249 3.2E-148 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 SMART SM00283 303 557 5.6E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 SUPERFAMILY SSF58104 309 556 5.1E-65 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 SUPERFAMILY SSF58104 243 269 5.1E-65 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 SMART SM00304 214 267 6.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 Pfam PF00672 HAMP domain 195 262 1.6E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 Gene3D G3DSA:1.10.287.950 324 527 1.8E-46 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 187 1.5E-25 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 PANTHER PTHR32089 281 560 3.2E-148 T 22-04-2016 AMK58_RS02635 e20ee0684b0c09baebf27d77c574bf98 563 PANTHER PTHR32089 193 249 3.2E-148 T 22-04-2016 AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 Pfam PF00128 Alpha amylase, catalytic domain 59 135 2.2E-11 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 Gene3D G3DSA:3.20.20.80 25 191 3.1E-48 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 SUPERFAMILY SSF51445 17 191 1.47E-60 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 Gene3D G3DSA:2.60.40.10 1 19 0.001 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 PANTHER PTHR10357 1 193 5.0E-60 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS17885 26a98ac460477215ac68d5ec391b3592 193 PANTHER PTHR10357:SF110 1 193 5.0E-60 T 22-04-2016 AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 163 8.5E-33 T 22-04-2016 IPR017516 AbrB duplication AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 189 340 6.8E-35 T 22-04-2016 IPR017516 AbrB duplication AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 PANTHER PTHR38457:SF1 2 353 1.3E-56 T 22-04-2016 AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 Pfam PF05145 Putative ammonia monooxygenase 33 342 2.2E-86 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 PANTHER PTHR38457 2 353 1.3E-56 T 22-04-2016 AMK58_RS03690 b39db8f4117a94a6b7b257c30192dff5 353 PIRSF PIRSF038991 5 351 7.2E-85 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 394 5.8E-162 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 SUPERFAMILY SSF52210 248 394 3.53E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 PANTHER PTHR11815 1 398 1.5E-240 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Gene3D G3DSA:3.30.470.20 105 248 5.7E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Pfam PF08442 ATP-grasp domain 2 211 1.6E-77 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 SUPERFAMILY SSF56059 1 247 1.79E-83 T 22-04-2016 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 266 291 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Pfam PF00549 CoA-ligase 271 391 6.5E-28 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Gene3D G3DSA:3.30.1490.20 22 104 9.4E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 PIRSF PIRSF001554 1 397 1.2E-152 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 395 43.07 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK58_RS02570 e6654010c6676f1fdeec5435e4b636b7 398 Gene3D G3DSA:3.40.50.261 250 392 2.0E-69 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 SMART SM00490 498 580 4.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Pfam PF00271 Helicase conserved C-terminal domain 468 579 8.3E-18 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Pfam PF00270 DEAD/DEAH box helicase 268 426 4.3E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Gene3D G3DSA:3.40.50.300 252 447 1.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 SUPERFAMILY SSF50249 7 175 4.63E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 SMART SM00487 262 452 1.0E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031 265 279 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031:SF249 296 593 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Gene3D G3DSA:3.40.50.300 448 629 1.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031:SF249 265 279 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031:SF249 617 691 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 SUPERFAMILY SSF52540 180 445 3.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 34 656 7.4E-209 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031 617 691 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 SUPERFAMILY SSF52540 444 645 6.25E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 PANTHER PTHR24031 296 593 7.5E-112 T 22-04-2016 AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Gene3D G3DSA:2.40.50.140 52 136 3.8E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS08500 4908afc92e776b73977742a9adc2145f 693 Pfam PF17191 RecG wedge domain 18 174 1.6E-7 T 22-04-2016 IPR033454 RecG, wedge domain AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 PANTHER PTHR32332:SF18 3 50 3.3E-13 T 22-04-2016 AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 PANTHER PTHR32332:SF18 76 305 3.3E-13 T 22-04-2016 AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 SUPERFAMILY SSF51412 79 310 6.71E-7 T 22-04-2016 AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 SUPERFAMILY SSF51412 25 50 6.71E-7 T 22-04-2016 AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 PANTHER PTHR32332 3 50 3.3E-13 T 22-04-2016 AMK58_RS00810 70b46ff0acbdf0477abdc8e719166e12 465 PANTHER PTHR32332 76 305 3.3E-13 T 22-04-2016 AMK58_RS12490 f0dc67a8e3c6a90ff9c2353749aa2218 180 Pfam PF01124 MAPEG family 64 175 1.4E-9 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMK58_RS12490 f0dc67a8e3c6a90ff9c2353749aa2218 180 Gene3D G3DSA:1.20.120.550 65 179 1.4E-7 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AMK58_RS12490 f0dc67a8e3c6a90ff9c2353749aa2218 180 SUPERFAMILY SSF161084 64 178 1.37E-11 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Pfam PF06251 Capsule biosynthesis GfcC 830 980 2.0E-16 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 153 1.2E-7 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 PANTHER PTHR33619:SF1 689 1008 1.6E-61 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 PANTHER PTHR33619:SF1 80 416 1.6E-61 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.10.560.10 154 250 1.1E-14 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.10.560.10 870 899 2.7E-13 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.10.560.10 686 763 1.6E-10 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.10.560.10 900 950 3.3E-7 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.10.560.10 772 818 2.7E-13 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Gene3D G3DSA:3.30.1950.10 88 153 3.9E-5 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Pfam PF10531 SLBB domain 161 214 3.2E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Pfam PF10531 SLBB domain 774 809 2.3E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 Pfam PF10531 SLBB domain 691 733 1.9E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 SUPERFAMILY SSF142984 772 809 4.05E-5 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 PANTHER PTHR33619 689 1008 1.6E-61 T 22-04-2016 AMK58_RS07175 a4cb311e7cde6ef349d920ff7f552cbf 1013 PANTHER PTHR33619 80 416 1.6E-61 T 22-04-2016 AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 174 192 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 10 256 3.2E-89 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 Hamap MF_01974 Methionine aminopeptidase [map]. 9 257 39.094 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 Pfam PF00557 Metallopeptidase family M24 18 248 3.6E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PANTHER PTHR10804:SF82 9 266 2.2E-115 T 22-04-2016 AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 97 113 1.3E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 168 180 1.3E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 199 211 1.3E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 1.3E-20 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 Gene3D G3DSA:3.90.230.10 12 258 1.1E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 SUPERFAMILY SSF55920 12 260 2.09E-84 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK58_RS07340 0d9524ab3f053b138820e2abf8eb1489 275 PANTHER PTHR10804 9 266 2.2E-115 T 22-04-2016 AMK58_RS16190 74a8ccebe536847539841b353283cd94 298 Gene3D G3DSA:2.40.128.140 2 297 9.8E-92 T 22-04-2016 AMK58_RS16190 74a8ccebe536847539841b353283cd94 298 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 2 297 8.7E-95 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 AMK58_RS02365 1c06ebe1c681244394fbee0653a6aadb 245 Pfam PF13581 Histidine kinase-like ATPase domain 107 242 3.3E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02365 1c06ebe1c681244394fbee0653a6aadb 245 Gene3D G3DSA:3.30.565.10 114 209 6.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02365 1c06ebe1c681244394fbee0653a6aadb 245 SUPERFAMILY SSF55874 180 244 8.08E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS02365 1c06ebe1c681244394fbee0653a6aadb 245 SUPERFAMILY SSF55874 113 147 8.08E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS07100 894083aa5eea56a23c8e6049042ccc7b 217 PIRSF PIRSF009467 1 217 2.2E-58 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK58_RS07100 894083aa5eea56a23c8e6049042ccc7b 217 Pfam PF01730 UreF 25 174 1.6E-34 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK58_RS07100 894083aa5eea56a23c8e6049042ccc7b 217 Hamap MF_01385 Urease accessory protein UreF [ureF]. 1 217 27.768 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK58_RS07100 894083aa5eea56a23c8e6049042ccc7b 217 PANTHER PTHR33620 1 217 7.5E-39 T 22-04-2016 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 SUPERFAMILY SSF53927 19 268 7.82E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 PIRSF PIRSF015626 7 273 4.5E-84 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 PANTHER PTHR30592:SF2 3 280 1.7E-145 T 22-04-2016 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 Gene3D G3DSA:3.10.20.10 38 118 7.4E-17 T 22-04-2016 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 PANTHER PTHR30592 3 280 1.7E-145 T 22-04-2016 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 32 262 2.3E-43 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 Pfam PF02634 FdhD/NarQ family 37 268 1.9E-70 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 AMK58_RS04300 603d3787f55287b9e4bc2a4c1ead2dd2 293 Gene3D G3DSA:3.40.140.10 133 272 2.5E-48 T 22-04-2016 AMK58_RS03155 822e7b8dd5eb1bebe26dd707aeb7cf49 576 SUPERFAMILY SSF48452 386 534 1.54E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03155 822e7b8dd5eb1bebe26dd707aeb7cf49 576 Gene3D G3DSA:1.25.40.10 348 534 2.8E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS03155 822e7b8dd5eb1bebe26dd707aeb7cf49 576 PANTHER PTHR23083 348 551 1.3E-17 T 22-04-2016 AMK58_RS03155 822e7b8dd5eb1bebe26dd707aeb7cf49 576 Pfam PF13432 Tetratricopeptide repeat 448 504 3.7E-4 T 22-04-2016 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 SUPERFAMILY SSF52540 10 201 3.93E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 Pfam PF00005 ABC transporter 307 441 1.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 Pfam PF00005 ABC transporter 24 152 9.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 Gene3D G3DSA:3.40.50.300 10 247 1.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 Gene3D G3DSA:3.40.50.300 287 509 4.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 Pfam PF16326 ABC transporter C-terminal domain 529 598 6.2E-21 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 PANTHER PTHR19211 10 539 8.8E-166 T 22-04-2016 AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 SMART SM00382 32 197 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 SMART SM00382 315 486 7.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03990 ce34153f337c2a7687f5758d6d993b53 608 SUPERFAMILY SSF52540 282 493 8.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 160 258 1.1E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 PANTHER PTHR30085 71 372 1.4E-138 T 22-04-2016 AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 PANTHER PTHR30085:SF3 71 372 1.4E-138 T 22-04-2016 AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 SUPERFAMILY SSF161098 159 352 2.75E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 181 367 1.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07670 170528ffd97d4deb77a0f87c9632086b 372 Gene3D G3DSA:1.10.3720.10 158 368 3.3E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS14395 d899f9c07fd8478b1e922071052d2382 99 SUPERFAMILY SSF53807 8 98 1.23E-23 T 22-04-2016 AMK58_RS14395 d899f9c07fd8478b1e922071052d2382 99 Pfam PF01297 Zinc-uptake complex component A periplasmic 20 95 3.7E-19 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK58_RS14395 d899f9c07fd8478b1e922071052d2382 99 Gene3D G3DSA:3.40.50.1980 14 94 1.4E-22 T 22-04-2016 AMK58_RS02845 b31ed69ed124cbc6c030f01b4d13b23d 335 Gene3D G3DSA:3.40.1090.10 2 304 1.8E-64 T 22-04-2016 AMK58_RS02845 b31ed69ed124cbc6c030f01b4d13b23d 335 Pfam PF01734 Patatin-like phospholipase 6 187 1.4E-23 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK58_RS02845 b31ed69ed124cbc6c030f01b4d13b23d 335 PANTHER PTHR24138 5 319 1.8E-26 T 22-04-2016 AMK58_RS02845 b31ed69ed124cbc6c030f01b4d13b23d 335 SUPERFAMILY SSF52151 5 279 1.57E-48 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK58_RS07950 3967c941cf443322ef4b856ca831e000 152 Gene3D G3DSA:3.90.1170.40 2 148 3.1E-52 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07950 3967c941cf443322ef4b856ca831e000 152 Pfam PF02391 MoaE protein 6 119 9.8E-35 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07950 3967c941cf443322ef4b856ca831e000 152 SUPERFAMILY SSF54690 3 148 1.57E-49 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07950 3967c941cf443322ef4b856ca831e000 152 PANTHER PTHR23404:SF2 25 150 1.1E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK58_RS07950 3967c941cf443322ef4b856ca831e000 152 PANTHER PTHR23404 25 150 1.1E-37 T 22-04-2016 AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 PANTHER PTHR30024:SF1 1 287 9.3E-42 T 22-04-2016 AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 SUPERFAMILY SSF53850 38 258 4.91E-35 T 22-04-2016 AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 SMART SM00062 37 273 0.0065 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 Gene3D G3DSA:3.40.190.10 128 246 4.7E-18 T 22-04-2016 AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 PANTHER PTHR30024 1 287 9.3E-42 T 22-04-2016 AMK58_RS10700 8377dd28d84567af4be8975a715df202 340 Pfam PF09084 NMT1/THI5 like 47 256 3.7E-27 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS01515 78a3cd8d7a6537bce0c2ffc0074aa8ab 234 PANTHER PTHR30133 8 234 1.7E-85 T 22-04-2016 AMK58_RS01515 78a3cd8d7a6537bce0c2ffc0074aa8ab 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 219 5.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01515 78a3cd8d7a6537bce0c2ffc0074aa8ab 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 122 3.2E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK58_RS01515 78a3cd8d7a6537bce0c2ffc0074aa8ab 234 Gene3D G3DSA:1.10.3720.10 14 228 4.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01515 78a3cd8d7a6537bce0c2ffc0074aa8ab 234 SUPERFAMILY SSF161098 14 213 6.93E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07420 aacff7bb0ee455b780c4c57b4e630de3 333 PANTHER PTHR30518:SF2 5 325 3.7E-82 T 22-04-2016 AMK58_RS07420 aacff7bb0ee455b780c4c57b4e630de3 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 140 315 5.0E-64 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK58_RS07420 aacff7bb0ee455b780c4c57b4e630de3 333 Gene3D G3DSA:3.30.160.60 286 321 1.6E-18 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AMK58_RS07420 aacff7bb0ee455b780c4c57b4e630de3 333 PANTHER PTHR30518 5 325 3.7E-82 T 22-04-2016 AMK58_RS07420 aacff7bb0ee455b780c4c57b4e630de3 333 Pfam PF02618 YceG-like family 41 313 3.0E-82 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 PANTHER PTHR30435 1 135 6.0E-50 T 22-04-2016 AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 135 2.2E-45 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 132 1.8E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 PANTHER PTHR30435:SF2 1 135 6.0E-50 T 22-04-2016 AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK58_RS10075 5dcf494f5eee77ea34024879501517bb 136 Pfam PF00460 Flagella basal body rod protein 9 34 3.0E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 PIRSF PIRSF018005 2 323 9.2E-119 T 22-04-2016 IPR017804 Methyltransferase EgtD-like AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 22 320 3.6E-124 T 22-04-2016 IPR017804 Methyltransferase EgtD-like AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 Gene3D G3DSA:3.40.50.150 282 310 3.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 Gene3D G3DSA:3.40.50.150 62 217 3.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 PANTHER PTHR30468 22 322 2.4E-85 T 22-04-2016 AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 195 318 1.2E-44 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 SUPERFAMILY SSF53335 257 312 9.68E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 SUPERFAMILY SSF53335 66 209 9.68E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05975 d098e3ac10b18ed5c95d5734ab02295c 324 PANTHER PTHR30468:SF6 22 322 2.4E-85 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 Pfam PF13710 ACT domain 17 79 6.8E-13 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 Pfam PF10369 Small subunit of acetolactate synthase 91 164 1.7E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 Gene3D G3DSA:3.30.70.1150 90 165 4.3E-25 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 7 164 7.5E-51 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 PANTHER PTHR30239 1 162 3.6E-64 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 Gene3D G3DSA:3.30.70.260 6 84 5.0E-32 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 SUPERFAMILY SSF55021 7 82 1.06E-18 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 7 82 8.0E-28 T 22-04-2016 AMK58_RS05525 96e4492827876a96f195ac2494a328eb 168 SUPERFAMILY SSF55021 86 165 5.04E-23 T 22-04-2016 AMK58_RS09185 948b7ee6e81406db64b23d544045981e 105 PANTHER PTHR30561:SF0 1 104 5.7E-49 T 22-04-2016 AMK58_RS09185 948b7ee6e81406db64b23d544045981e 105 SUPERFAMILY SSF103481 6 102 7.85E-20 T 22-04-2016 AMK58_RS09185 948b7ee6e81406db64b23d544045981e 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.7E-29 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AMK58_RS09185 948b7ee6e81406db64b23d544045981e 105 PANTHER PTHR30561 1 104 5.7E-49 T 22-04-2016 AMK58_RS15915 245a5e314681487ea6e39976060e7c3b 281 PANTHER PTHR30349 1 281 4.4E-58 T 22-04-2016 AMK58_RS15915 245a5e314681487ea6e39976060e7c3b 281 PIRSF PIRSF017082 14 281 3.9E-78 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS15915 245a5e314681487ea6e39976060e7c3b 281 PANTHER PTHR30349:SF16 1 281 4.4E-58 T 22-04-2016 AMK58_RS15915 245a5e314681487ea6e39976060e7c3b 281 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 280 1.8E-43 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS12720 c5387a6ddd4d3f51b8c559a3e63f4eba 141 PANTHER PTHR38459 16 137 1.5E-16 T 22-04-2016 AMK58_RS12720 c5387a6ddd4d3f51b8c559a3e63f4eba 141 PANTHER PTHR38459:SF1 16 137 1.5E-16 T 22-04-2016 AMK58_RS12720 c5387a6ddd4d3f51b8c559a3e63f4eba 141 Pfam PF04138 GtrA-like protein 17 132 6.3E-28 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 1.9E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 SUPERFAMILY SSF55229 33 84 7.19E-16 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 2.8E-27 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 PANTHER PTHR33404 1 112 3.5E-19 T 22-04-2016 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.0 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AMK58_RS04430 027d8d2d054ae50b163f796701f1b3c3 131 Gene3D G3DSA:3.30.1070.10 33 82 2.6E-21 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 Pfam PF13458 Periplasmic binding protein 33 356 1.0E-51 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 SUPERFAMILY SSF53822 35 360 1.02E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 PANTHER PTHR30483 2 333 3.5E-46 T 22-04-2016 AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 Gene3D G3DSA:3.40.50.2300 29 147 1.6E-24 T 22-04-2016 AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 Gene3D G3DSA:3.40.50.2300 301 350 1.6E-24 T 22-04-2016 AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 PANTHER PTHR30483:SF6 2 333 3.5E-46 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS05635 056ba6a5df8f63ba111f17c49ec09d35 384 Gene3D G3DSA:3.40.50.2300 148 300 6.7E-33 T 22-04-2016 AMK58_RS10960 b7f725701cb86e478a540f63bdfb8ad5 149 Pfam PF01575 MaoC like domain 28 127 5.3E-27 T 22-04-2016 IPR002539 MaoC-like domain AMK58_RS10960 b7f725701cb86e478a540f63bdfb8ad5 149 PANTHER PTHR13078 16 148 5.1E-43 T 22-04-2016 AMK58_RS10960 b7f725701cb86e478a540f63bdfb8ad5 149 Gene3D G3DSA:3.10.129.10 15 146 1.4E-48 T 22-04-2016 IPR029069 HotDog domain AMK58_RS10960 b7f725701cb86e478a540f63bdfb8ad5 149 SUPERFAMILY SSF54637 13 148 4.99E-45 T 22-04-2016 IPR029069 HotDog domain AMK58_RS10750 7ac10819dda955056866718dcccf78f8 251 SUPERFAMILY SSF52833 79 245 5.79E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS10750 7ac10819dda955056866718dcccf78f8 251 PANTHER PTHR13887:SF25 25 250 5.5E-79 T 22-04-2016 AMK58_RS10750 7ac10819dda955056866718dcccf78f8 251 Pfam PF13462 Thioredoxin 88 245 1.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS10750 7ac10819dda955056866718dcccf78f8 251 Gene3D G3DSA:3.40.30.10 81 249 1.4E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS10750 7ac10819dda955056866718dcccf78f8 251 PANTHER PTHR13887 25 250 5.5E-79 T 22-04-2016 AMK58_RS02935 122a20c83f786edbd6b7ae887d6b544b 237 Pfam PF12236 Bacteriophage head to tail connecting protein 1 232 1.9E-86 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type AMK58_RS05550 44da000023f8c0a2a2b3fe11d09288f4 289 PANTHER PTHR34138 11 273 2.4E-55 T 22-04-2016 AMK58_RS05550 44da000023f8c0a2a2b3fe11d09288f4 289 PANTHER PTHR34138:SF1 11 273 2.4E-55 T 22-04-2016 AMK58_RS05550 44da000023f8c0a2a2b3fe11d09288f4 289 PIRSF PIRSF038471 14 288 1.3E-63 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK58_RS05550 44da000023f8c0a2a2b3fe11d09288f4 289 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 19 275 6.5E-40 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK58_RS05550 44da000023f8c0a2a2b3fe11d09288f4 289 Pfam PF04085 rod shape-determining protein MreC 134 273 6.5E-34 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 428 1.7E-105 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 Gene3D G3DSA:3.40.1190.10 7 286 4.6E-96 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 Gene3D G3DSA:3.90.190.20 287 429 6.2E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 SUPERFAMILY SSF53623 11 285 1.09E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 SUPERFAMILY SSF53244 285 429 8.24E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 PANTHER PTHR11136 23 429 1.8E-113 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 Pfam PF08245 Mur ligase middle domain 50 263 3.2E-11 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK58_RS01645 d48d34213e567cd31e3e3d7d686053fc 432 PIRSF PIRSF001563 4 431 5.4E-103 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 43 442 1.4E-105 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 3 456 1.1E-192 T 22-04-2016 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0006461|GO:0009399 UniPathway: UPA00782 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 SUPERFAMILY SSF53807 18 456 4.25E-138 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 PANTHER PTHR33712:SF6 3 456 2.3E-208 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 Gene3D G3DSA:3.40.50.1980 321 459 1.4E-45 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 61 68 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 Gene3D G3DSA:3.40.50.1980 43 178 3.6E-48 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 Gene3D G3DSA:3.40.50.1980 179 287 2.1E-42 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 PANTHER PTHR33712 3 456 2.3E-208 T 22-04-2016 AMK58_RS04635 c64898b03d29fe7fe62f6a8394bc58f6 471 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 127 141 - T 22-04-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 Pfam PF16344 Domain of unknown function (DUF4974) 224 309 2.1E-8 T 22-04-2016 IPR032508 Protein FecR, C-terminal AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 2.4E-11 T 22-04-2016 IPR032623 FecR, N-terminal AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 PANTHER PTHR30273:SF2 6 325 5.4E-64 T 22-04-2016 AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 Pfam PF04773 FecR protein 115 205 1.2E-22 T 22-04-2016 IPR006860 FecR protein AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 PANTHER PTHR30273 6 325 5.4E-64 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AMK58_RS03090 6b82b94e92373b8952f00fdd9c4e90fb 325 PIRSF PIRSF018266 2 325 3.1E-83 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 SUPERFAMILY SSF75217 16 172 2.68E-30 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 PANTHER PTHR12029 18 171 7.2E-23 T 22-04-2016 AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 Gene3D G3DSA:3.40.1280.10 17 172 1.8E-29 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 17 248 3.0E-50 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 PIRSF PIRSF004808 12 255 1.8E-75 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK58_RS11520 5172f65bf5fbb4301fe46b930fa482f6 256 Pfam PF00588 SpoU rRNA Methylase family 17 167 4.0E-27 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK58_RS08920 0e21d4185980ad2559191c7576a42679 367 PANTHER PTHR21310:SF14 79 340 6.3E-23 T 22-04-2016 AMK58_RS08920 0e21d4185980ad2559191c7576a42679 367 PANTHER PTHR21310 79 340 6.3E-23 T 22-04-2016 AMK58_RS08920 0e21d4185980ad2559191c7576a42679 367 Pfam PF01636 Phosphotransferase enzyme family 81 278 2.2E-30 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase AMK58_RS08920 0e21d4185980ad2559191c7576a42679 367 Gene3D G3DSA:3.90.1200.10 130 315 4.7E-30 T 22-04-2016 AMK58_RS08920 0e21d4185980ad2559191c7576a42679 367 SUPERFAMILY SSF56112 33 317 5.69E-41 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS03265 00775d512fd70f46eae0df18adb66cb8 719 SUPERFAMILY SSF53300 536 708 4.61E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03265 00775d512fd70f46eae0df18adb66cb8 719 SMART SM00327 534 710 1.5E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03265 00775d512fd70f46eae0df18adb66cb8 719 Pfam PF13519 von Willebrand factor type A domain 537 643 1.4E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03265 00775d512fd70f46eae0df18adb66cb8 719 Gene3D G3DSA:3.40.50.410 536 701 1.1E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 SUPERFAMILY SSF52467 229 347 6.07E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 Gene3D G3DSA:3.40.50.620 22 219 3.4E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 229 311 4.2E-34 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 PANTHER PTHR10909 213 347 1.9E-33 T 22-04-2016 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 Pfam PF01012 Electron transfer flavoprotein domain 24 203 7.7E-43 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 SMART SM00893 24 216 5.9E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 PIRSF PIRSF000089 20 353 1.5E-106 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 292 318 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 SUPERFAMILY SSF52402 22 220 6.91E-53 T 22-04-2016 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 PANTHER PTHR10909:SF309 213 347 1.9E-33 T 22-04-2016 AMK58_RS04560 355375ab9ef17db74779d8ae3bf544cc 359 Gene3D G3DSA:3.40.50.1220 223 348 2.6E-50 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 Gene3D G3DSA:3.40.50.1000 32 105 1.8E-45 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 Gene3D G3DSA:3.40.50.1000 181 271 1.8E-45 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 30 268 4.1E-49 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 SUPERFAMILY SSF56784 33 269 1.04E-35 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 Pfam PF02358 Trehalose-phosphatase 35 255 1.7E-48 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 PANTHER PTHR10788 14 270 9.8E-74 T 22-04-2016 AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 34 229 2.9E-17 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK58_RS10560 1a1f28bec62180be9c92e3044d2d4e59 274 PANTHER PTHR10788:SF31 14 270 9.8E-74 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 SUPERFAMILY SSF58104 470 505 1.22E-62 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 SUPERFAMILY SSF58104 546 793 1.22E-62 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 615 793 6.6E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 SMART SM00304 450 503 3.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 PANTHER PTHR32089:SF40 518 797 1.1E-111 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 Pfam PF00672 HAMP domain 431 497 7.8E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 SMART SM00283 540 794 4.5E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 PANTHER PTHR32089 518 797 1.1E-111 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 Pfam PF16591 Helical bimodular sensor domain 26 249 5.2E-10 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 Gene3D G3DSA:1.10.287.950 557 764 1.1E-45 T 22-04-2016 AMK58_RS05235 6234e1bad04ba6354ce58939c24307fb 800 SMART SM01358 26 293 1.3E-15 T 22-04-2016 IPR032255 Helical bimodular sensor domain AMK58_RS10870 2dc54003086072caa68d48d2e82ea12c 161 Pfam PF02470 MlaD protein 36 113 2.6E-20 T 22-04-2016 IPR003399 Mce/MlaD AMK58_RS10870 2dc54003086072caa68d48d2e82ea12c 161 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 144 2.9E-44 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AMK58_RS10870 2dc54003086072caa68d48d2e82ea12c 161 PANTHER PTHR33371 1 149 7.0E-31 T 22-04-2016 AMK58_RS02585 0b9f3b608ab6803583b48af09618cb1d 409 PANTHER PTHR40253 71 363 2.7E-16 T 22-04-2016 AMK58_RS02585 0b9f3b608ab6803583b48af09618cb1d 409 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 148 402 8.4E-54 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 AMK58_RS02585 0b9f3b608ab6803583b48af09618cb1d 409 SUPERFAMILY SSF48371 73 182 1.34E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 14 340 2.7E-144 T 22-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 PANTHER PTHR11203 19 228 1.5E-78 T 22-04-2016 AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 Gene3D G3DSA:3.60.15.10 285 320 1.2E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 Gene3D G3DSA:3.60.15.10 223 224 1.2E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 Gene3D G3DSA:3.60.15.10 35 125 1.2E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 SUPERFAMILY SSF56281 19 324 8.26E-60 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 PANTHER PTHR11203:SF35 19 228 1.5E-78 T 22-04-2016 AMK58_RS08395 3d1cceda8fe364e2fe745c548b501631 342 Pfam PF12706 Beta-lactamase superfamily domain 25 143 2.6E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 SUPERFAMILY SSF52540 63 389 9.15E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Gene3D G3DSA:1.10.8.60 314 412 5.8E-36 T 22-04-2016 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 307 1.5E-50 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 PANTHER PTHR11262 2 416 1.7E-252 T 22-04-2016 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Gene3D G3DSA:3.40.50.300 291 308 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Gene3D G3DSA:3.40.50.300 65 252 3.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 SMART SM00382 110 264 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.377 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 SMART SM01086 314 409 2.7E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 385 1.1E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 SMART SM00994 12 51 1.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 3.4E-199 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 SUPERFAMILY SSF57716 13 48 1.18E-11 T 22-04-2016 AMK58_RS06095 46ca694e240d3e6508edc2f52e22ce94 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 2.7E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 PANTHER PTHR11748:SF86 29 472 4.2E-106 T 22-04-2016 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 PANTHER PTHR11748 29 472 4.2E-106 T 22-04-2016 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 Gene3D G3DSA:3.30.43.10 41 111 3.1E-14 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 55 88 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 Pfam PF08031 Berberine and berberine like 428 470 3.3E-13 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 Gene3D G3DSA:3.30.465.10 112 221 1.7E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 Pfam PF01565 FAD binding domain 56 189 1.5E-31 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS05285 af469870e57e511d6979c514f785ea67 474 SUPERFAMILY SSF56176 28 221 2.48E-57 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 28 96 2.0E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 458 529 1.4E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 112 180 4.6E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 371 443 3.5E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 199 269 2.2E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SMART SM00316 284 356 6.7E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 114 180 1.3E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 287 356 7.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 458 529 3.6E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 29 95 5.3E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 370 443 1.6E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Pfam PF00575 S1 RNA binding domain 199 269 4.6E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 351 449 1.27E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 264 368 3.58E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 201 287 5.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 30 110 2.9E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 288 367 4.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 442 543 1.57E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 115 194 3.35E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 198 284 1.04E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 12 529 3.1E-204 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 SUPERFAMILY SSF50249 17 121 1.33E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 452 530 1.2E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 111 181 1.5E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PANTHER PTHR10724:SF6 5 523 3.0E-232 T 22-04-2016 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PANTHER PTHR10724 5 523 3.0E-232 T 22-04-2016 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 Gene3D G3DSA:2.40.50.140 368 451 1.6E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 164 184 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 135 152 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 93 112 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 339 357 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 30 48 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 48 62 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 299 318 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 221 242 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS12645 15f3ba8a21c2052bf4d312a826c5edac 569 PRINTS PR00681 Ribosomal protein S1 signature 117 133 5.6E-85 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 PANTHER PTHR11550 1 538 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 50.7 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 Pfam PF00117 Glutamine amidotransferase class-I 301 534 1.8E-57 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 SUPERFAMILY SSF52317 289 538 1.08E-79 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 Gene3D G3DSA:3.40.50.300 1 284 6.3E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 Pfam PF06418 CTP synthase N-terminus 3 264 3.0E-119 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 SUPERFAMILY SSF52540 1 266 3.99E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 4.8E-226 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK58_RS06450 5ae2bccd16ce74eb2fa2f0277042d4d8 542 Gene3D G3DSA:3.40.50.880 288 539 2.3E-93 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS10000 b879ab5891bd726ff485afb117a7ac29 183 Pfam PF13328 HD domain 10 137 2.4E-23 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS10000 b879ab5891bd726ff485afb117a7ac29 183 SMART SM00471 27 135 1.3E-9 T 22-04-2016 IPR003607 HD/PDEase domain AMK58_RS10000 b879ab5891bd726ff485afb117a7ac29 183 PANTHER PTHR21262 7 173 1.9E-61 T 22-04-2016 AMK58_RS10000 b879ab5891bd726ff485afb117a7ac29 183 SUPERFAMILY SSF109604 7 171 2.86E-43 T 22-04-2016 AMK58_RS00300 aa6cef696f80dfac7fba114eb1526836 173 PANTHER PTHR38589:SF1 2 168 3.5E-38 T 22-04-2016 AMK58_RS00300 aa6cef696f80dfac7fba114eb1526836 173 Pfam PF03734 L,D-transpeptidase catalytic domain 22 166 9.1E-10 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK58_RS00300 aa6cef696f80dfac7fba114eb1526836 173 PANTHER PTHR38589 2 168 3.5E-38 T 22-04-2016 AMK58_RS00540 e199f0b97da5c78b7278af2d2c4216d3 134 SMART SM00530 7 63 4.0E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS00540 e199f0b97da5c78b7278af2d2c4216d3 134 Gene3D G3DSA:1.10.260.40 4 106 3.5E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS00540 e199f0b97da5c78b7278af2d2c4216d3 134 Pfam PF12844 Helix-turn-helix domain 5 58 1.4E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK58_RS00540 e199f0b97da5c78b7278af2d2c4216d3 134 SUPERFAMILY SSF47413 2 58 1.24E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS05110 0c3e5a159ea0c8e14cb7225c80c49071 237 Pfam PF04654 Protein of unknown function, DUF599 11 218 5.5E-57 T 22-04-2016 IPR006747 Protein of unknown function DUF599 AMK58_RS05110 0c3e5a159ea0c8e14cb7225c80c49071 237 PANTHER PTHR31881 2 237 2.0E-57 T 22-04-2016 AMK58_RS05110 0c3e5a159ea0c8e14cb7225c80c49071 237 PANTHER PTHR31881:SF3 2 237 2.0E-57 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 7.8E-33 T 22-04-2016 IPR024478 4HB MCP domain AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 Gene3D G3DSA:1.10.287.950 319 521 1.6E-45 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 SMART SM00283 299 553 1.6E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PANTHER PTHR32089:SF40 177 245 1.4E-138 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PANTHER PTHR32089:SF40 277 556 1.4E-138 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 552 2.7E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 2.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 2.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 2.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 424 2.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 Pfam PF00672 HAMP domain 191 258 1.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 SMART SM00304 210 263 2.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 SUPERFAMILY SSF58104 305 552 3.14E-60 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 SUPERFAMILY SSF58104 239 265 3.14E-60 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PANTHER PTHR32089 177 245 1.4E-138 T 22-04-2016 AMK58_RS02615 4a7e9875545c2260ee1b254252f44140 559 PANTHER PTHR32089 277 556 1.4E-138 T 22-04-2016 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 SUPERFAMILY SSF53187 146 458 5.02E-104 T 22-04-2016 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PANTHER PTHR11963:SF13 104 460 7.6E-144 T 22-04-2016 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 3.8E-40 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PRINTS PR00481 Cytosol aminopeptidase signature 306 326 3.8E-40 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PRINTS PR00481 Cytosol aminopeptidase signature 334 349 3.8E-40 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PRINTS PR00481 Cytosol aminopeptidase signature 225 242 3.8E-40 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PRINTS PR00481 Cytosol aminopeptidase signature 247 268 3.8E-40 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 Gene3D G3DSA:3.40.630.10 141 459 4.3E-113 T 22-04-2016 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 PANTHER PTHR11963 104 460 7.6E-144 T 22-04-2016 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 310 317 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK58_RS12005 d32f344150f2cd6a8cb54f31b09f146a 462 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 151 449 5.9E-100 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 Pfam PF10442 FIST C domain 238 376 1.1E-26 T 22-04-2016 IPR019494 FIST, C-domain AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 SMART SM01204 238 378 1.3E-37 T 22-04-2016 IPR019494 FIST, C-domain AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 PANTHER PTHR14939 209 380 1.1E-19 T 22-04-2016 AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 Pfam PF08495 FIST N domain 44 236 2.3E-26 T 22-04-2016 IPR013702 FIST domain, N-terminal AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 PANTHER PTHR14939:SF5 209 380 1.1E-19 T 22-04-2016 AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 PIRSF PIRSF018953 6 391 1.2E-51 T 22-04-2016 IPR016741 Uncharacterised conserved protein UCP018953 AMK58_RS13720 e3fba6e989de501b598fe7d71c4b739b 391 SMART SM00897 43 237 2.5E-24 T 22-04-2016 IPR013702 FIST domain, N-terminal AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 38 56 2.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 62 75 2.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 3 17 2.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 Gene3D G3DSA:3.30.565.10 2 76 1.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 PANTHER PTHR24423 2 129 4.6E-35 T 22-04-2016 AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 SUPERFAMILY SSF55874 2 76 2.23E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 SMART SM00387 2 78 2.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS25950 56f666e92d464d72a81b6684ab8dcb00 129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2 76 9.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 292 510 3.0E-50 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 PANTHER PTHR33209 54 520 2.2E-159 T 22-04-2016 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Pfam PF01343 Peptidase family S49 361 512 1.9E-45 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Pfam PF01343 Peptidase family S49 130 261 1.4E-27 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 PIRSF PIRSF001217 1 569 1.3E-145 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 32 550 1.9E-98 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 PANTHER PTHR33209:SF1 54 520 2.2E-159 T 22-04-2016 AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Gene3D G3DSA:3.90.226.10 285 401 1.6E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Gene3D G3DSA:3.90.226.10 193 274 5.7E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Gene3D G3DSA:3.90.226.10 13 150 5.7E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 Gene3D G3DSA:3.90.226.10 439 515 1.6E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 SUPERFAMILY SSF52096 194 255 1.56E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 SUPERFAMILY SSF52096 65 161 1.56E-19 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 SUPERFAMILY SSF52096 438 498 1.7E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS09700 9f0ce52e06682463f1b91ebead3ee256 583 SUPERFAMILY SSF52096 283 409 1.7E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 SUPERFAMILY SSF55021 17 73 2.24E-10 T 22-04-2016 AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 Pfam PF13840 ACT domain 72 133 2.2E-22 T 22-04-2016 IPR027795 GATS-like ACT domain AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 SUPERFAMILY SSF55021 75 135 2.91E-17 T 22-04-2016 AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 Gene3D G3DSA:3.30.2130.10 45 135 6.8E-17 T 22-04-2016 AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 PANTHER PTHR31131 16 134 1.0E-28 T 22-04-2016 AMK58_RS08560 08ccf5126bd812b92e181f4108fa2e1a 142 PIRSF PIRSF008459 15 140 5.8E-33 T 22-04-2016 IPR016540 Uncharacterised conserved protein UCP008459 AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 Pfam PF02021 Uncharacterised protein family UPF0102 18 107 1.7E-21 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 PANTHER PTHR34039 7 120 3.6E-29 T 22-04-2016 AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 Gene3D G3DSA:3.40.1350.10 17 121 7.2E-30 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 PANTHER PTHR34039:SF1 7 120 3.6E-29 T 22-04-2016 AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 SUPERFAMILY SSF52980 14 120 2.68E-24 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS13835 d6e0a1e63b3e303a1392c9be5985c7ff 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 11 120 19.042 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK58_RS02240 4189defbae61f535f093649bf001ed9e 268 PANTHER PTHR30399:SF3 22 248 5.5E-51 T 22-04-2016 AMK58_RS02240 4189defbae61f535f093649bf001ed9e 268 Pfam PF01863 Protein of unknown function DUF45 41 238 1.3E-49 T 22-04-2016 IPR002725 Protein of unknown function DUF45 AMK58_RS02240 4189defbae61f535f093649bf001ed9e 268 PANTHER PTHR30399 22 248 5.5E-51 T 22-04-2016 AMK58_RS05375 f886e73948088df87fa7af5ba40b67a6 82 Hamap MF_00797 UPF0335 protein . 3 80 23.145 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 AMK58_RS05375 f886e73948088df87fa7af5ba40b67a6 82 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 8 79 2.1E-36 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 Pfam PF00483 Nucleotidyl transferase 16 285 1.9E-67 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 Gene3D G3DSA:3.90.550.10 16 296 3.1E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 Gene3D G3DSA:3.90.550.10 339 382 3.1E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 107 115 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 PANTHER PTHR22572 15 393 6.5E-172 T 22-04-2016 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 SUPERFAMILY SSF53448 14 289 6.98E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 SUPERFAMILY SSF53448 373 385 6.98E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 15 392 9.1E-156 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 PANTHER PTHR22572:SF10 15 393 6.5E-172 T 22-04-2016 AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 SUPERFAMILY SSF51161 305 409 2.72E-16 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS01315 9fe0cd479b502251df27a77007d452a2 423 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 11 418 52.255 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 Gene3D G3DSA:2.30.42.10 275 364 2.3E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 Gene3D G3DSA:2.40.10.10 162 274 1.4E-45 T 22-04-2016 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 SUPERFAMILY SSF50156 231 355 2.6E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 Gene3D G3DSA:2.40.10.10 47 161 4.7E-35 T 22-04-2016 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PANTHER PTHR22939:SF101 33 363 2.2E-133 T 22-04-2016 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 SUPERFAMILY SSF50494 45 265 1.11E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PANTHER PTHR22939 33 363 2.2E-133 T 22-04-2016 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 170 194 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 313 325 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 109 121 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 PRINTS PR00834 HtrA/DegQ protease family signature 130 150 7.1E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 SMART SM00228 273 355 1.3E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 48 363 8.5E-130 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 Pfam PF13180 PDZ domain 273 362 1.5E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK58_RS01995 ec445e060365a971606125c3fe301d86 366 Pfam PF13365 Trypsin-like peptidase domain 99 234 2.1E-33 T 22-04-2016 AMK58_RS09530 1f32b0b7322367ecc474993c075359ef 309 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 294 1.5E-102 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMK58_RS09530 1f32b0b7322367ecc474993c075359ef 309 PANTHER PTHR11048 21 298 1.9E-77 T 22-04-2016 AMK58_RS09530 1f32b0b7322367ecc474993c075359ef 309 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 72 94 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site AMK58_RS09530 1f32b0b7322367ecc474993c075359ef 309 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 18 298 20.212 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMK58_RS09530 1f32b0b7322367ecc474993c075359ef 309 Pfam PF01040 UbiA prenyltransferase family 35 279 2.4E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK58_RS21270 508ec9b9b473b72b9eeb317c650e42d9 174 SUPERFAMILY SSF103481 2 53 1.7E-8 T 22-04-2016 AMK58_RS21270 508ec9b9b473b72b9eeb317c650e42d9 174 SUPERFAMILY SSF103481 97 172 7.98E-8 T 22-04-2016 AMK58_RS21270 508ec9b9b473b72b9eeb317c650e42d9 174 Pfam PF00892 EamA-like transporter family 58 172 4.5E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS21270 508ec9b9b473b72b9eeb317c650e42d9 174 PANTHER PTHR22911 2 174 7.7E-30 T 22-04-2016 AMK58_RS21270 508ec9b9b473b72b9eeb317c650e42d9 174 PANTHER PTHR22911:SF6 2 174 7.7E-30 T 22-04-2016 AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 Pfam PF01471 Putative peptidoglycan binding domain 370 425 4.6E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 Gene3D G3DSA:1.10.530.10 238 354 4.7E-54 T 22-04-2016 AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 Gene3D G3DSA:1.10.530.10 100 157 4.7E-54 T 22-04-2016 AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 PANTHER PTHR30163:SF2 34 428 2.0E-150 T 22-04-2016 AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 SUPERFAMILY SSF53955 46 354 2.25E-95 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 56 353 1.6E-113 T 22-04-2016 IPR011970 Lytic murein transglycosylase AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 SUPERFAMILY SSF47090 358 429 3.92E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 Pfam PF13406 Transglycosylase SLT domain 56 349 8.2E-108 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 Gene3D G3DSA:1.10.101.10 369 430 2.1E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS05035 0c30ce370ae56e46529f4f3536d9a0e9 436 PANTHER PTHR30163 34 428 2.0E-150 T 22-04-2016 IPR011757 Lytic transglycosylase MltB AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 287 372 5.0E-31 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 SMART SM00932 287 373 5.2E-49 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 PANTHER PTHR11178:SF1 284 380 1.5E-43 T 22-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 PANTHER PTHR11178 284 380 1.5E-43 T 22-04-2016 AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 Gene3D G3DSA:3.30.1370.70 284 374 7.8E-35 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS14460 49fb98defc0d3bc7bf5d28b12494257e 391 SUPERFAMILY SSF110836 285 374 1.7E-30 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS02890 0e6797d090b080cc238a716076443827 397 Pfam PF07690 Major Facilitator Superfamily 23 350 5.3E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS02890 0e6797d090b080cc238a716076443827 397 Gene3D G3DSA:1.20.1250.20 213 385 3.8E-11 T 22-04-2016 AMK58_RS02890 0e6797d090b080cc238a716076443827 397 PANTHER PTHR23501:SF28 15 392 1.1E-109 T 22-04-2016 AMK58_RS02890 0e6797d090b080cc238a716076443827 397 Gene3D G3DSA:1.20.1250.20 16 194 5.3E-27 T 22-04-2016 AMK58_RS02890 0e6797d090b080cc238a716076443827 397 PANTHER PTHR23501 15 392 1.1E-109 T 22-04-2016 AMK58_RS02890 0e6797d090b080cc238a716076443827 397 SUPERFAMILY SSF103473 15 389 1.7E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 Pfam PF13091 PLD-like domain 268 392 6.5E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 SMART SM00155 352 379 3.7E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 SMART SM00155 134 161 0.0027 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 PANTHER PTHR18896:SF76 260 427 1.9E-16 T 22-04-2016 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 PANTHER PTHR18896:SF76 137 240 1.9E-16 T 22-04-2016 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 SUPERFAMILY SSF56024 16 251 6.28E-30 T 22-04-2016 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 PANTHER PTHR18896 260 427 1.9E-16 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 PANTHER PTHR18896 137 240 1.9E-16 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 Pfam PF00614 Phospholipase D Active site motif 137 161 1.4E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 SUPERFAMILY SSF56024 264 419 1.44E-24 T 22-04-2016 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 Gene3D G3DSA:3.30.870.10 24 251 5.1E-23 T 22-04-2016 AMK58_RS01955 154a3b7d8b20d34a9cbd9375ac3dcea5 525 Gene3D G3DSA:3.30.870.10 266 393 2.2E-18 T 22-04-2016 AMK58_RS24635 60467465a588dad4ffe1a311d8100321 262 PANTHER PTHR22683 7 262 1.2E-117 T 22-04-2016 AMK58_RS24635 60467465a588dad4ffe1a311d8100321 262 Pfam PF01580 FtsK/SpoIIIE family 117 259 7.0E-49 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK58_RS24635 60467465a588dad4ffe1a311d8100321 262 Gene3D G3DSA:3.40.50.300 94 251 1.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS24635 60467465a588dad4ffe1a311d8100321 262 SUPERFAMILY SSF52540 104 251 8.38E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS24635 60467465a588dad4ffe1a311d8100321 262 PANTHER PTHR22683:SF41 7 262 1.2E-117 T 22-04-2016 AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 PANTHER PTHR12526:SF363 2 329 3.0E-78 T 22-04-2016 AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 SUPERFAMILY SSF53756 2 328 1.53E-66 T 22-04-2016 AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 PANTHER PTHR12526 2 329 3.0E-78 T 22-04-2016 AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 Pfam PF13692 Glycosyl transferases group 1 179 292 1.2E-18 T 22-04-2016 AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 Pfam PF13439 Glycosyltransferase Family 4 14 165 3.5E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK58_RS10835 5351e68d9283899d9448cfd6c4b52a7e 332 Gene3D G3DSA:3.40.50.2000 159 302 5.2E-18 T 22-04-2016 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 Gene3D G3DSA:2.30.30.40 84 137 9.2E-7 T 22-04-2016 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 SUPERFAMILY SSF50341 4 144 7.32E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 Gene3D G3DSA:2.40.50.180 47 83 1.4E-10 T 22-04-2016 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 SMART SM00260 5 143 4.1E-41 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 Pfam PF01584 CheW-like domain 9 144 9.6E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK58_RS02400 e5b6c6ce95fdf54d2670f4611c2ae78d 164 PANTHER PTHR22617 8 159 5.8E-42 T 22-04-2016 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 Gene3D G3DSA:1.10.10.10 137 198 5.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 2.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 2.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 2.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 SMART SM00421 138 195 1.3E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 SUPERFAMILY SSF46894 123 198 1.33E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS08055 d6e7035e21890a640fda250d942aad83 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 3.0E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS05385 d432a5b3192b552786af5dfc41a260aa 140 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 54 137 9.0E-37 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 AMK58_RS05385 d432a5b3192b552786af5dfc41a260aa 140 PANTHER PTHR10160 50 137 2.3E-36 T 22-04-2016 AMK58_RS08610 762f05ee93250e0d07dab49182f5abc1 298 SUPERFAMILY SSF47240 1 285 1.59E-84 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS08610 762f05ee93250e0d07dab49182f5abc1 298 PANTHER PTHR30565:SF3 2 273 3.4E-118 T 22-04-2016 AMK58_RS08610 762f05ee93250e0d07dab49182f5abc1 298 Pfam PF05067 Manganese containing catalase 1 266 2.0E-85 T 22-04-2016 IPR007760 Manganese catalase AMK58_RS08610 762f05ee93250e0d07dab49182f5abc1 298 PANTHER PTHR30565 2 273 3.4E-118 T 22-04-2016 AMK58_RS08610 762f05ee93250e0d07dab49182f5abc1 298 Gene3D G3DSA:1.20.1260.10 1 198 4.0E-74 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 SMART SM00052 7 248 5.2E-34 T 22-04-2016 IPR001633 EAL domain AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 PANTHER PTHR33121 22 248 9.9E-83 T 22-04-2016 AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 Pfam PF00563 EAL domain 23 243 1.3E-50 T 22-04-2016 IPR001633 EAL domain AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 PANTHER PTHR33121:SF15 22 248 9.9E-83 T 22-04-2016 AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 Gene3D G3DSA:3.20.20.450 22 244 5.7E-54 T 22-04-2016 IPR001633 EAL domain AMK58_RS05685 20cc9b36d53de9783fc946b796e8c5d0 260 SUPERFAMILY SSF141868 22 244 4.58E-59 T 22-04-2016 IPR001633 EAL domain AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 Gene3D G3DSA:1.10.490.10 11 159 2.1E-8 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 SUPERFAMILY SSF46458 10 159 6.04E-8 T 22-04-2016 IPR009050 Globin-like AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 SUPERFAMILY SSF58104 154 444 1.44E-57 T 22-04-2016 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 Gene3D G3DSA:1.10.287.950 210 414 2.1E-41 T 22-04-2016 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PANTHER PTHR32089 169 448 4.0E-112 T 22-04-2016 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 Pfam PF11563 Protoglobin 12 167 1.4E-13 T 22-04-2016 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PANTHER PTHR32089:SF40 169 448 4.0E-112 T 22-04-2016 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 269 444 5.7E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 212 241 1.78E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 395 1.78E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 1.78E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 316 1.78E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS10840 7d68a804b6470e940196d3fb69cd1f38 451 SMART SM00283 191 445 9.2E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 SUPERFAMILY SSF50447 2 89 1.24E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 SMART SM00863 187 230 1.2E-12 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 SUPERFAMILY SSF55186 90 231 4.84E-29 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 Pfam PF01411 tRNA synthetases class II (A) 14 93 6.7E-11 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 PANTHER PTHR11777 7 230 2.8E-52 T 22-04-2016 AMK58_RS07705 26047047fa1a13f9cc3e2c0d71633574 235 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 187 230 5.5E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS07820 75fedbe78b0c113f8b3fd03bdcfda3c9 224 Pfam PF14326 Domain of unknown function (DUF4384) 114 182 1.5E-7 T 22-04-2016 IPR025493 Domain of unknown function DUF4384 AMK58_RS12220 5f611febd643d8b770bed98d43ad69cb 229 Pfam PF08279 HTH domain 6 59 8.6E-20 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK58_RS12220 5f611febd643d8b770bed98d43ad69cb 229 SUPERFAMILY SSF46785 3 62 6.63E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12220 5f611febd643d8b770bed98d43ad69cb 229 Gene3D G3DSA:1.10.10.10 2 63 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12220 5f611febd643d8b770bed98d43ad69cb 229 Pfam PF13280 WYL domain 138 227 2.7E-13 T 22-04-2016 IPR026881 WYL domain AMK58_RS12220 5f611febd643d8b770bed98d43ad69cb 229 PANTHER PTHR34580 1 223 5.1E-40 T 22-04-2016 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 PANTHER PTHR26402 13 160 8.5E-42 T 22-04-2016 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 Gene3D G3DSA:3.40.50.2300 11 136 1.4E-41 T 22-04-2016 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 SMART SM00448 13 127 3.5E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 SUPERFAMILY SSF52172 9 146 5.69E-42 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 Pfam PF00072 Response regulator receiver domain 15 127 1.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 SMART SM00331 174 392 3.9E-12 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 205 392 2.7E-35 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS02355 dfa91b692c6212901c404584e90952bf 394 SUPERFAMILY SSF81606 246 390 6.02E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 SMART SM00387 224 342 2.8E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 SUPERFAMILY SSF55874 181 339 7.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423:SF445 146 347 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423:SF445 82 126 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423:SF445 1 10 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 341 2.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 Gene3D G3DSA:3.30.565.10 186 339 1.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423 146 347 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423 82 126 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PANTHER PTHR24423 1 10 5.2E-58 T 22-04-2016 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 319 3.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 3.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 339 3.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS09145 0af30c5850b82db6c513c31f3453b0b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 3.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 SUPERFAMILY SSF53850 19 233 6.59E-38 T 22-04-2016 AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 SMART SM00062 17 235 6.1E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 PANTHER PTHR35936 1 235 8.6E-20 T 22-04-2016 AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 Gene3D G3DSA:3.40.190.10 2 116 9.6E-19 T 22-04-2016 AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 19 233 8.1E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS11280 fa454403ff05d38993976d845ae81100 235 Gene3D G3DSA:3.40.190.10 117 193 9.9E-8 T 22-04-2016 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 Pfam PF11741 AMIN domain 51 124 8.7E-7 T 22-04-2016 IPR021731 AMIN domain AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 205 420 1.1E-44 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 SUPERFAMILY SSF53187 346 424 2.67E-47 T 22-04-2016 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 SUPERFAMILY SSF53187 203 299 2.67E-47 T 22-04-2016 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 Gene3D G3DSA:3.40.630.40 347 424 6.0E-54 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 Gene3D G3DSA:3.40.630.40 204 300 6.0E-54 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 PANTHER PTHR30404 201 424 9.2E-76 T 22-04-2016 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 PANTHER PTHR30404:SF0 201 424 9.2E-76 T 22-04-2016 AMK58_RS10730 01688c04d5a703852b28c24ed25d649f 432 SMART SM00646 265 420 1.3E-39 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK58_RS27225 fa76f0584b84017ad25cf58c6faf0628 186 PANTHER PTHR21021 1 143 7.2E-16 T 22-04-2016 AMK58_RS27225 fa76f0584b84017ad25cf58c6faf0628 186 PANTHER PTHR21021:SF21 1 143 7.2E-16 T 22-04-2016 AMK58_RS27225 fa76f0584b84017ad25cf58c6faf0628 186 SMART SM00331 1 186 0.0033 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS27225 fa76f0584b84017ad25cf58c6faf0628 186 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1 185 1.1E-31 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 Gene3D G3DSA:3.50.50.60 113 336 2.8E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 SUPERFAMILY SSF51905 161 338 3.01E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PANTHER PTHR22912 205 337 1.8E-34 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PANTHER PTHR22912 1 151 1.8E-34 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PANTHER PTHR22912 168 189 1.8E-34 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 333 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 SUPERFAMILY SSF51905 12 228 3.7E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.0E-12 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.0E-12 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 4.0E-12 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 4.0E-12 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 Gene3D G3DSA:3.50.50.60 15 112 3.8E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.4E-8 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 1.4E-8 T 22-04-2016 AMK58_RS01610 d457cb37a19d54f6dd65db2433d7717f 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.4E-8 T 22-04-2016 AMK58_RS07180 62ba8d282d048fca24d7c9bd4bfe661f 111 Pfam PF12118 SprA-related family 4 108 2.1E-33 T 22-04-2016 IPR021973 SprA-related family AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 Pfam PF00106 short chain dehydrogenase 13 201 1.1E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 Gene3D G3DSA:3.40.50.720 12 238 2.2E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PANTHER PTHR24320 14 242 2.0E-38 T 22-04-2016 AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 207 6.7E-4 T 22-04-2016 AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 SUPERFAMILY SSF51735 8 266 1.53E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09190 562a9e35068dca9cda43265b9a152912 343 PANTHER PTHR24320:SF1 14 242 2.0E-38 T 22-04-2016 AMK58_RS26030 e8ce4ac64d114ae079561e802cb9cf79 161 Pfam PF00271 Helicase conserved C-terminal domain 70 139 1.2E-5 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS26030 e8ce4ac64d114ae079561e802cb9cf79 161 PANTHER PTHR12131 4 161 5.0E-48 T 22-04-2016 AMK58_RS26030 e8ce4ac64d114ae079561e802cb9cf79 161 Gene3D G3DSA:3.40.50.300 68 138 1.4E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS26030 e8ce4ac64d114ae079561e802cb9cf79 161 PANTHER PTHR12131:SF4 4 161 5.0E-48 T 22-04-2016 AMK58_RS26030 e8ce4ac64d114ae079561e802cb9cf79 161 SUPERFAMILY SSF52540 43 148 1.01E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05935 8325197d4bc18bb619d7327c2301a31a 183 SUPERFAMILY SSF55811 8 91 4.48E-8 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS05935 8325197d4bc18bb619d7327c2301a31a 183 SUPERFAMILY SSF55811 120 141 4.48E-8 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS05935 8325197d4bc18bb619d7327c2301a31a 183 Gene3D G3DSA:3.90.79.10 10 142 4.6E-8 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 SUPERFAMILY SSF48179 180 300 1.36E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 Gene3D G3DSA:3.40.50.720 1 177 2.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 SUPERFAMILY SSF51735 1 155 5.05E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 Gene3D G3DSA:1.10.1040.10 180 300 4.5E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 300 2.7E-24 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 PANTHER PTHR21708 1 302 7.3E-89 T 22-04-2016 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 PANTHER PTHR21708:SF26 1 302 7.3E-89 T 22-04-2016 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 153 2.3E-40 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS03315 90b67b849060e3e5ad5eca76b3196081 307 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 299 7.1E-71 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 PANTHER PTHR10937:SF0 1 608 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Gene3D G3DSA:3.60.20.10 2 234 3.7E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Pfam PF13522 Glutamine amidotransferase domain 62 193 1.6E-23 T 22-04-2016 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 PANTHER PTHR10937 1 608 0.0 T 22-04-2016 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 SUPERFAMILY SSF53697 246 608 7.21E-112 T 22-04-2016 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 39.493 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 SUPERFAMILY SSF56235 2 234 2.92E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 3.6E-244 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Pfam PF01380 SIS domain 461 590 1.5E-22 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Pfam PF01380 SIS domain 288 415 3.0E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Gene3D G3DSA:3.40.50.10490 441 608 1.4E-65 T 22-04-2016 AMK58_RS08675 dc33b298cbc36b1b402fe3c1b98515c6 608 Gene3D G3DSA:3.40.50.10490 244 440 9.2E-70 T 22-04-2016 AMK58_RS02195 134d089a37d25e8454fa5d2fb0126c0e 78 Gene3D G3DSA:2.20.25.10 26 72 9.4E-26 T 22-04-2016 AMK58_RS02195 134d089a37d25e8454fa5d2fb0126c0e 78 Pfam PF03966 Trm112p-like protein 20 59 3.3E-10 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AMK58_RS02195 134d089a37d25e8454fa5d2fb0126c0e 78 SUPERFAMILY SSF158997 19 72 3.27E-21 T 22-04-2016 AMK58_RS02195 134d089a37d25e8454fa5d2fb0126c0e 78 PANTHER PTHR33505 20 72 4.9E-27 T 22-04-2016 AMK58_RS02195 134d089a37d25e8454fa5d2fb0126c0e 78 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 19 72 28.056 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AMK58_RS00375 d97d10e901c0c0932f79a600233a548f 119 Gene3D G3DSA:3.40.30.10 9 110 6.3E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00375 d97d10e901c0c0932f79a600233a548f 119 PANTHER PTHR11780 9 107 9.4E-26 T 22-04-2016 AMK58_RS00375 d97d10e901c0c0932f79a600233a548f 119 SUPERFAMILY SSF52833 8 108 4.25E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS00375 d97d10e901c0c0932f79a600233a548f 119 PANTHER PTHR11780:SF12 9 107 9.4E-26 T 22-04-2016 AMK58_RS11090 d1f1ec46f89f581c9ba856494832cbe6 290 Gene3D G3DSA:3.90.1580.10 1 288 5.2E-90 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS11090 d1f1ec46f89f581c9ba856494832cbe6 290 PANTHER PTHR23150 1 287 7.1E-93 T 22-04-2016 AMK58_RS11090 d1f1ec46f89f581c9ba856494832cbe6 290 SUPERFAMILY SSF56436 1 287 6.22E-89 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS11090 d1f1ec46f89f581c9ba856494832cbe6 290 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1 286 3.9E-84 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme AMK58_RS11085 501d543f27e136572b834d6ff607c87d 345 SUPERFAMILY SSF53850 32 263 1.62E-27 T 22-04-2016 AMK58_RS11085 501d543f27e136572b834d6ff607c87d 345 Gene3D G3DSA:3.40.190.10 115 243 6.0E-11 T 22-04-2016 AMK58_RS11085 501d543f27e136572b834d6ff607c87d 345 Pfam PF09084 NMT1/THI5 like 43 248 6.2E-33 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS11085 501d543f27e136572b834d6ff607c87d 345 PANTHER PTHR31528 23 345 4.6E-51 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK58_RS02785 2768795287dc2f15dba6d0c77726da5f 149 Pfam PF13467 Ribbon-helix-helix domain 57 118 3.1E-17 T 22-04-2016 IPR027373 Ribbon-helix-helix domain AMK58_RS28135 9fbc2e359cec41744016a0bc2779d978 125 Gene3D G3DSA:2.40.160.10 1 125 3.5E-15 T 22-04-2016 IPR023614 Porin domain AMK58_RS28135 9fbc2e359cec41744016a0bc2779d978 125 Pfam PF13609 Gram-negative porin 2 125 8.3E-14 T 22-04-2016 AMK58_RS28135 9fbc2e359cec41744016a0bc2779d978 125 SUPERFAMILY SSF56935 6 102 5.04E-5 T 22-04-2016 AMK58_RS02815 5e649a03a020669e11f20d6ba5467817 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 112 1.0E-34 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 AMK58_RS02815 5e649a03a020669e11f20d6ba5467817 119 Pfam PF13811 Domain of unknown function (DUF4186) 5 112 3.0E-44 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 Gene3D G3DSA:3.40.50.720 10 204 1.0E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PANTHER PTHR24322:SF317 15 146 7.9E-59 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PANTHER PTHR24322:SF317 162 194 7.9E-59 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 SUPERFAMILY SSF51735 9 258 1.37E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PIRSF PIRSF000094 5 263 9.8E-113 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.86E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 5.86E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 5.86E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.86E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.86E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PANTHER PTHR24322 15 146 7.9E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 PANTHER PTHR24322 162 194 7.9E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS09670 efa9fc0aeb1aa88d4beecf7406415f1c 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.3E-90 T 22-04-2016 AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 SUPERFAMILY SSF81296 23 115 3.67E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 Pfam PF04234 CopC domain 24 114 2.5E-17 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 Gene3D G3DSA:2.60.40.1220 23 115 1.6E-15 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 Pfam PF05425 Copper resistance protein D 312 412 7.2E-21 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 PANTHER PTHR34820 1 538 1.8E-74 T 22-04-2016 AMK58_RS00925 98a4f94624ad960d257c40b5c126d25a 538 PANTHER PTHR34820:SF2 1 538 1.8E-74 T 22-04-2016 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 9 157 8.1E-66 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 PANTHER PTHR22960 7 163 9.9E-102 T 22-04-2016 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 SUPERFAMILY SSF55040 16 160 1.96E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 Gene3D G3DSA:3.30.70.640 9 161 3.6E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 7 163 37.592 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 AMK58_RS06385 083d20af17702b482f744391a475dce7 164 Pfam PF01967 MoaC family 20 155 5.2E-57 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK58_RS08680 26314e12a12a3fba3bd3df1e9ede4d3e 195 PANTHER PTHR37425 16 193 1.6E-49 T 22-04-2016 AMK58_RS08680 26314e12a12a3fba3bd3df1e9ede4d3e 195 Pfam PF05951 Bacterial protein of unknown function (DUF882) 46 193 1.4E-57 T 22-04-2016 IPR010275 Protein of unknown function DUF882 AMK58_RS08680 26314e12a12a3fba3bd3df1e9ede4d3e 195 Gene3D G3DSA:3.30.1380.10 78 194 5.6E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS08680 26314e12a12a3fba3bd3df1e9ede4d3e 195 SUPERFAMILY SSF55166 76 194 4.32E-34 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS15760 c837c9c6151bd5b4833cf90b3a1757cf 133 Gene3D G3DSA:1.10.287.500 66 112 3.7E-11 T 22-04-2016 AMK58_RS15760 c837c9c6151bd5b4833cf90b3a1757cf 133 Gene3D G3DSA:1.10.287.500 19 59 1.9E-6 T 22-04-2016 AMK58_RS15760 c837c9c6151bd5b4833cf90b3a1757cf 133 SUPERFAMILY SSF75708 2 125 1.28E-29 T 22-04-2016 AMK58_RS13580 9511d6006d9cf9560232f3d9483ac17f 801 Gene3D G3DSA:3.40.50.200 438 637 3.0E-11 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS13580 9511d6006d9cf9560232f3d9483ac17f 801 Gene3D G3DSA:3.40.50.200 262 404 3.0E-11 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS13580 9511d6006d9cf9560232f3d9483ac17f 801 Pfam PF00082 Subtilase family 284 601 1.4E-11 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS13580 9511d6006d9cf9560232f3d9483ac17f 801 SUPERFAMILY SSF52743 441 643 2.36E-22 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS13580 9511d6006d9cf9560232f3d9483ac17f 801 SUPERFAMILY SSF52743 250 405 2.36E-22 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS13200 da08ab541ed7a72e63496ba21ec27e67 163 Pfam PF00959 Phage lysozyme 30 128 1.7E-18 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMK58_RS13200 da08ab541ed7a72e63496ba21ec27e67 163 SUPERFAMILY SSF53955 4 149 3.22E-48 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS13200 da08ab541ed7a72e63496ba21ec27e67 163 Gene3D G3DSA:1.10.530.40 6 149 7.1E-53 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 AMK58_RS13200 da08ab541ed7a72e63496ba21ec27e67 163 PANTHER PTHR38107 7 151 3.1E-34 T 22-04-2016 AMK58_RS13200 da08ab541ed7a72e63496ba21ec27e67 163 PANTHER PTHR38107:SF2 7 151 3.1E-34 T 22-04-2016 AMK58_RS08215 2ca41d4b132a149c69478fd695f13302 115 Pfam PF11011 Protein of unknown function (DUF2849) 14 107 1.4E-22 T 22-04-2016 IPR021270 Protein of unknown function DUF2849 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 4.4E-224 T 22-04-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 SUPERFAMILY SSF55931 304 452 4.12E-71 T 22-04-2016 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 SUPERFAMILY SSF55931 25 265 4.12E-71 T 22-04-2016 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 PANTHER PTHR34378:SF1 8 454 2.8E-261 T 22-04-2016 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 51 358 4.6E-101 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 PANTHER PTHR34378 8 454 2.8E-261 T 22-04-2016 AMK58_RS10770 94103f0898835f5f129bb4be216c8550 454 PIRSF PIRSF017901 1 454 1.3E-192 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 SUPERFAMILY SSF53756 2 385 7.22E-53 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 PANTHER PTHR12526:SF397 128 396 5.7E-33 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 PANTHER PTHR12526:SF397 1 108 5.7E-33 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 PANTHER PTHR12526 128 396 5.7E-33 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 PANTHER PTHR12526 1 108 5.7E-33 T 22-04-2016 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 Pfam PF00534 Glycosyl transferases group 1 273 372 7.8E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK58_RS00195 5e4ce8698194d0f17e04bf9a3eee8080 400 Gene3D G3DSA:3.40.50.2000 169 372 6.9E-27 T 22-04-2016 AMK58_RS10095 5ea917eb8f423a19efd80b79d1caba88 111 Pfam PF04347 Flagellar biosynthesis protein, FliO 25 79 3.9E-9 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMK58_RS12640 65f9178678cfd605c4a9992d2c7fb16e 268 Pfam PF09955 Predicted integral membrane protein (DUF2189) 76 198 7.8E-32 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 AMK58_RS10825 b368c20f9df168fc18f27e3ba9fcd0d9 317 SMART SM00046 25 156 2.4E-12 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK58_RS10825 b368c20f9df168fc18f27e3ba9fcd0d9 317 PANTHER PTHR12358 23 317 4.6E-47 T 22-04-2016 AMK58_RS10825 b368c20f9df168fc18f27e3ba9fcd0d9 317 SUPERFAMILY SSF111331 23 316 1.53E-66 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK58_RS10825 b368c20f9df168fc18f27e3ba9fcd0d9 317 Pfam PF00781 Diacylglycerol kinase catalytic domain 25 150 3.4E-27 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK58_RS23515 7b28323027f3565b1df7f4aa994a9600 171 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 2 170 2.3E-52 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK58_RS23515 7b28323027f3565b1df7f4aa994a9600 171 PANTHER PTHR11606:SF1 6 120 2.5E-31 T 22-04-2016 AMK58_RS23515 7b28323027f3565b1df7f4aa994a9600 171 PANTHER PTHR11606 6 120 2.5E-31 T 22-04-2016 AMK58_RS25925 00e0e3440d5ddd54dbd5b5f3ca0dee9d 254 TIGRFAM TIGR00576 dut: dUTP diphosphatase 145 254 8.3E-45 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK58_RS25925 00e0e3440d5ddd54dbd5b5f3ca0dee9d 254 Gene3D G3DSA:2.70.40.10 141 253 7.2E-46 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS25925 00e0e3440d5ddd54dbd5b5f3ca0dee9d 254 SUPERFAMILY SSF51283 138 253 3.93E-42 T 22-04-2016 IPR029054 dUTPase-like AMK58_RS25925 00e0e3440d5ddd54dbd5b5f3ca0dee9d 254 Pfam PF00692 dUTPase 151 253 8.4E-26 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMK58_RS25925 00e0e3440d5ddd54dbd5b5f3ca0dee9d 254 PANTHER PTHR11241 140 254 4.2E-44 T 22-04-2016 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 3.4E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 31.511 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 SUPERFAMILY SSF50104 1 120 4.31E-46 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.1E-37 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.1E-37 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.1E-37 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 PANTHER PTHR15680 2 117 7.6E-56 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 Pfam PF01245 Ribosomal protein L19 3 117 1.2E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12240 83439e58301ae08776f86ebb947f0194 131 PIRSF PIRSF002191 1 131 4.0E-55 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS21565 e71d5df4602246d59302fae5f05aea54 210 Gene3D G3DSA:2.160.10.10 164 208 9.2E-5 T 22-04-2016 AMK58_RS03350 98d91d9927633fd5f9a17dfff1c69d27 329 PANTHER PTHR33986:SF2 74 329 2.6E-54 T 22-04-2016 AMK58_RS03350 98d91d9927633fd5f9a17dfff1c69d27 329 PANTHER PTHR33986 74 329 2.6E-54 T 22-04-2016 AMK58_RS03350 98d91d9927633fd5f9a17dfff1c69d27 329 Pfam PF06258 Mitochondrial fission ELM1 19 320 4.2E-109 T 22-04-2016 IPR009367 Mitochondrial fission protein ELM1-like AMK58_RS02190 11fa7b7732a2e583339a5858329cc426 229 SUPERFAMILY SSF88697 16 211 4.97E-46 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS02190 11fa7b7732a2e583339a5858329cc426 229 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 17 120 4.0E-15 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK58_RS02190 11fa7b7732a2e583339a5858329cc426 229 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 173 211 1.3E-6 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK58_RS02190 11fa7b7732a2e583339a5858329cc426 229 PANTHER PTHR10046 4 212 3.2E-26 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMK58_RS02190 11fa7b7732a2e583339a5858329cc426 229 SMART SM00464 16 213 2.4E-10 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 14 389 48.775 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 17 386 1.1E-139 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 SUPERFAMILY SSF52021 15 159 2.35E-54 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 16 143 5.5E-50 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 Pfam PF00117 Glutamine amidotransferase class-I 206 383 4.7E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 SUPERFAMILY SSF52317 167 387 6.11E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 360 373 3.0E-12 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 275 286 3.0E-12 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 246 255 3.0E-12 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PANTHER PTHR11405 14 386 3.5E-213 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 Gene3D G3DSA:3.40.50.880 167 387 7.2E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 275 291 2.3E-37 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 309 2.3E-37 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 317 328 2.3E-37 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 257 2.3E-37 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 204 218 2.3E-37 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00097 Anthranilate synthase component II signature 246 255 1.2E-6 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00097 Anthranilate synthase component II signature 275 286 1.2E-6 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 PRINTS PR00097 Anthranilate synthase component II signature 360 373 1.2E-6 T 22-04-2016 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 Gene3D G3DSA:3.50.30.20 16 158 6.7E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS09865 1fb7592990208ccc8804224b466e5936 391 SMART SM01097 14 144 3.8E-85 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK58_RS12895 a7fcb3fca3cc6ee90e7f8d20d0ce2495 172 Pfam PF13302 Acetyltransferase (GNAT) domain 14 148 8.6E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS12895 a7fcb3fca3cc6ee90e7f8d20d0ce2495 172 Gene3D G3DSA:3.40.630.30 8 164 2.9E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS12895 a7fcb3fca3cc6ee90e7f8d20d0ce2495 172 SUPERFAMILY SSF55729 7 165 3.78E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS12895 a7fcb3fca3cc6ee90e7f8d20d0ce2495 172 PANTHER PTHR13256 4 165 6.2E-28 T 22-04-2016 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PANTHER PTHR10366 2 326 4.9E-156 T 22-04-2016 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 Gene3D G3DSA:3.40.50.720 1 185 1.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 SUPERFAMILY SSF51735 1 324 4.27E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PANTHER PTHR10366:SF77 2 326 4.9E-156 T 22-04-2016 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 Gene3D G3DSA:3.90.25.10 186 324 1.0E-27 T 22-04-2016 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 2.5E-22 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PRINTS PR01713 Nucleotide sugar epimerase signature 286 303 2.5E-22 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.5E-22 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 PRINTS PR01713 Nucleotide sugar epimerase signature 247 262 2.5E-22 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK58_RS09230 8ae700e904a12110504dcf50fbbafc4b 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 253 4.9E-55 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PANTHER PTHR11739 6 436 6.5E-206 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 20 430 6.3E-237 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 Gene3D G3DSA:1.10.230.10 288 381 1.5E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PIRSF PIRSF001369 44 437 1.3E-169 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 Pfam PF00285 Citrate synthase, C-terminal domain 53 419 6.5E-134 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 367 383 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 248 276 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 387 401 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 226 241 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 303 323 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 PRINTS PR00143 Citrate synthase signature 172 185 1.3E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 Gene3D G3DSA:1.10.580.10 59 287 2.6E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK58_RS06360 b82e6ecead6f3ab95aa8ec871dd0c5e7 437 SUPERFAMILY SSF48256 12 436 5.63E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK58_RS09000 4a04905259fcd9f2ef6ef65e56329bd9 181 Pfam PF13463 Winged helix DNA-binding domain 64 128 7.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS09000 4a04905259fcd9f2ef6ef65e56329bd9 181 ProSitePatterns PS01117 MarR-type HTH domain signature. 94 128 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK58_RS09000 4a04905259fcd9f2ef6ef65e56329bd9 181 SUPERFAMILY SSF46785 29 171 3.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS09000 4a04905259fcd9f2ef6ef65e56329bd9 181 SMART SM00347 56 155 3.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS09000 4a04905259fcd9f2ef6ef65e56329bd9 181 Gene3D G3DSA:1.10.10.10 30 172 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 PANTHER PTHR24220:SF568 7 234 1.6E-87 T 22-04-2016 AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 Gene3D G3DSA:3.40.50.300 2 224 8.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 SUPERFAMILY SSF52540 3 225 9.67E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 SMART SM00382 30 213 3.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 PANTHER PTHR24220 7 234 1.6E-87 T 22-04-2016 AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 Pfam PF00005 ABC transporter 22 164 2.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS05650 fa9671565f4ac4b24c6065a5f9a28967 235 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 SUPERFAMILY SSF51735 2 240 4.26E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 7.7E-56 T 22-04-2016 AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 4.6E-120 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PANTHER PTHR24322 153 184 1.8E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PANTHER PTHR24322 7 137 1.8E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 Gene3D G3DSA:3.40.50.720 2 240 4.4E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS11155 7d260f34afd7199dadbdb86f4a0fb5c7 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 5.7E-5 T 22-04-2016 AMK58_RS09840 44f4af059de4ddf11cf0c08fdb78b304 159 SUPERFAMILY SSF55729 13 118 2.3E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS09840 44f4af059de4ddf11cf0c08fdb78b304 159 Gene3D G3DSA:3.40.630.30 10 118 4.2E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS09840 44f4af059de4ddf11cf0c08fdb78b304 159 Pfam PF00583 Acetyltransferase (GNAT) family 49 114 3.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS12430 8d796419cc81d06b8015ade4ffe4ed45 307 Pfam PF00535 Glycosyl transferase family 2 5 127 2.1E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS12430 8d796419cc81d06b8015ade4ffe4ed45 307 Gene3D G3DSA:3.90.550.10 2 220 5.5E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS12430 8d796419cc81d06b8015ade4ffe4ed45 307 SUPERFAMILY SSF53448 1 228 2.01E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS12430 8d796419cc81d06b8015ade4ffe4ed45 307 PANTHER PTHR22916 1 286 4.5E-40 T 22-04-2016 AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 Gene3D G3DSA:3.10.580.10 6 123 1.9E-35 T 22-04-2016 AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 Pfam PF00571 CBS domain 72 124 4.3E-11 T 22-04-2016 IPR000644 CBS domain AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 Pfam PF00571 CBS domain 13 56 1.6E-9 T 22-04-2016 IPR000644 CBS domain AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 SMART SM00116 14 61 1.4E-10 T 22-04-2016 IPR000644 CBS domain AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 SMART SM00116 79 126 3.9E-5 T 22-04-2016 IPR000644 CBS domain AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 PANTHER PTHR11911 13 141 2.9E-28 T 22-04-2016 AMK58_RS01195 64d5cf7044436637bfc982e1f59a4d0c 142 SUPERFAMILY SSF54631 5 135 2.91E-31 T 22-04-2016 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 PANTHER PTHR13501 9 128 1.4E-32 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 Gene3D G3DSA:3.90.470.10 14 123 1.3E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 20 119 7.5E-27 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 Pfam PF00237 Ribosomal protein L22p/L17e 22 119 7.1E-25 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 SUPERFAMILY SSF54843 11 123 1.83E-35 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10380 2bc954fe6a04997d2550fbc9dc2fafbf 131 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 23.121 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK58_RS08960 3f618d2b4d32068cb964a6c8a7e22a07 74 Pfam PF06620 Protein of unknown function (DUF1150) 37 74 5.4E-6 T 22-04-2016 IPR009531 Protein of unknown function DUF1150 AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 SUPERFAMILY SSF52540 52 241 2.02E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 PANTHER PTHR34383 22 275 2.6E-118 T 22-04-2016 AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 6 251 3.3E-75 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 PANTHER PTHR34383:SF3 22 275 2.6E-118 T 22-04-2016 AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 22 241 4.5E-89 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 PIRSF PIRSF028756 5 263 1.1E-82 T 22-04-2016 IPR016898 Polyphosphate kinase 2 AMK58_RS05670 aff6e52174fa159c7c64ac37d69c4432 275 Gene3D G3DSA:3.40.50.300 5 243 8.4E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 Pfam PF02954 Bacterial regulatory protein, Fis family 156 189 1.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 SMART SM00448 22 133 4.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 Gene3D G3DSA:1.10.10.60 136 191 1.4E-29 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 PANTHER PTHR26402 22 133 1.0E-49 T 22-04-2016 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 PANTHER PTHR26402:SF344 22 133 1.0E-49 T 22-04-2016 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 SUPERFAMILY SSF52172 23 179 8.82E-32 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 Gene3D G3DSA:3.40.50.2300 23 133 3.9E-28 T 22-04-2016 AMK58_RS12350 cc8050e511e170a149977e21e3c14bac 194 Pfam PF00072 Response regulator receiver domain 25 132 1.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 37 199 2.5E-32 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 Pfam PF01066 CDP-alcohol phosphatidyltransferase 32 95 1.4E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 214 250 1.1E-13 T 22-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 73 95 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 PANTHER PTHR15362:SF2 22 160 2.9E-30 T 22-04-2016 AMK58_RS09910 f47a7ebccde46a3af7b26c3625a36321 302 PANTHER PTHR15362 22 160 2.9E-30 T 22-04-2016 AMK58_RS07585 5bb506110f4e443f756e52648dab3016 126 Pfam PF08905 Domain of unknown function (DUF1850) 23 108 5.0E-28 T 22-04-2016 IPR015001 Protein of unknown function DUF1850 AMK58_RS00865 d8bad4f08aef93705acca63745b822d2 243 Gene3D G3DSA:3.40.50.300 32 221 4.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00865 d8bad4f08aef93705acca63745b822d2 243 Pfam PF13189 Cytidylate kinase-like family 34 204 1.3E-31 T 22-04-2016 IPR026865 Cytidylate kinase-like family MetaCyc: PWY-7205 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 14 295 58.615 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 SUPERFAMILY SSF55681 15 290 1.96E-134 T 22-04-2016 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 Gene3D G3DSA:3.30.930.10 11 218 3.0E-104 T 22-04-2016 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PANTHER PTHR30075 1 289 5.2E-228 T 22-04-2016 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 Gene3D G3DSA:1.20.58.180 219 291 7.3E-35 T 22-04-2016 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 16 290 1.6E-150 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 15 290 7.6E-146 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 89 109 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 120 144 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 146 166 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 255 271 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 169 184 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS04085 f3ca3f6cfc4b7583e07f659c4645d55a 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 68 83 2.1E-66 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 15 390 45.843 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 154 237 1.8E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 PANTHER PTHR30525 6 395 5.9E-207 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 PIRSF PIRSF006205 12 396 4.8E-149 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 SUPERFAMILY SSF69055 300 392 3.53E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Gene3D G3DSA:3.40.50.720 10 158 1.4E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 SUPERFAMILY SSF51735 12 158 4.14E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 15 140 1.4E-41 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 14 393 9.4E-140 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 3.9E-40 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 Gene3D G3DSA:1.10.1740.10 311 392 4.1E-27 T 22-04-2016 AMK58_RS06295 605f828b013cc4cb53aaf0435187e025 396 SUPERFAMILY SSF55347 134 272 5.23E-59 T 22-04-2016 AMK58_RS03270 970dc6d2c97dc328f3278d95bd7742c6 344 SUPERFAMILY SSF50494 128 331 1.01E-28 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS03270 970dc6d2c97dc328f3278d95bd7742c6 344 Gene3D G3DSA:2.40.10.10 227 331 2.4E-17 T 22-04-2016 AMK58_RS03270 970dc6d2c97dc328f3278d95bd7742c6 344 Gene3D G3DSA:2.40.10.10 145 220 4.3E-6 T 22-04-2016 AMK58_RS03270 970dc6d2c97dc328f3278d95bd7742c6 344 Pfam PF13365 Trypsin-like peptidase domain 147 302 3.0E-17 T 22-04-2016 AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 SUPERFAMILY SSF53448 1 157 1.17E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 PANTHER PTHR22572:SF10 1 157 1.2E-69 T 22-04-2016 AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 PANTHER PTHR22572 1 157 1.2E-69 T 22-04-2016 AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 Pfam PF00483 Nucleotidyl transferase 2 156 8.1E-35 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 50 58 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS26175 4730ceebae49e69d33d91a4d4456b377 157 Gene3D G3DSA:3.90.550.10 1 156 2.0E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 Pfam PF07722 Peptidase C26 5 224 1.3E-71 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 SUPERFAMILY SSF52317 4 240 1.55E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 PANTHER PTHR11922 21 69 1.7E-50 T 22-04-2016 AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 PANTHER PTHR11922 85 247 1.7E-50 T 22-04-2016 AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 Gene3D G3DSA:3.40.50.880 3 249 1.1E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 PANTHER PTHR11922:SF18 21 69 1.7E-50 T 22-04-2016 AMK58_RS00170 759ddf5fedb9891f68efa10533499071 253 PANTHER PTHR11922:SF18 85 247 1.7E-50 T 22-04-2016 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 SUPERFAMILY SSF56327 140 306 1.34E-45 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 142 309 9.2E-22 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 139 3.3E-36 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PANTHER PTHR11540 1 310 3.2E-118 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 5 303 2.4E-102 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PANTHER PTHR11540:SF3 1 310 3.2E-118 T 22-04-2016 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 1 309 36.36 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 SUPERFAMILY SSF51735 1 139 7.08E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 Gene3D G3DSA:3.90.110.10 142 310 2.2E-51 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 169 175 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PIRSF PIRSF000102 1 312 1.9E-93 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PRINTS PR00086 L-lactate dehydrogenase signature 167 180 9.3E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PRINTS PR00086 L-lactate dehydrogenase signature 137 155 9.3E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 9.3E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 9.3E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 PRINTS PR00086 L-lactate dehydrogenase signature 113 133 9.3E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK58_RS00850 e4880e54af1484c407941740b1ae733a 313 Gene3D G3DSA:3.40.50.720 1 141 1.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 Pfam PF01106 NifU-like domain 115 180 1.4E-30 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 SUPERFAMILY SSF117916 103 183 3.6E-29 T 22-04-2016 AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 1.1E-31 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 183 4.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 Gene3D G3DSA:3.30.1370.70 1 90 4.1E-35 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 SUPERFAMILY SSF110836 1 90 5.36E-31 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 PANTHER PTHR11178:SF1 1 183 1.4E-99 T 22-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 SMART SM00932 3 89 5.2E-49 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 PANTHER PTHR11178 1 183 1.4E-99 T 22-04-2016 AMK58_RS00655 2fe6b352adf679c7403fd8226afba92a 184 PIRSF PIRSF036773 1 184 7.6E-79 T 22-04-2016 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 308 6.2E-47 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 PIRSF PIRSF000446 1 318 1.9E-93 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 Pfam PF00698 Acyl transferase domain 5 283 3.1E-38 T 22-04-2016 IPR014043 Acyl transferase AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 SUPERFAMILY SSF55048 131 205 1.09E-14 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 Gene3D G3DSA:3.30.70.250 128 204 1.0E-23 T 22-04-2016 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 SUPERFAMILY SSF52151 4 131 7.15E-74 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 SUPERFAMILY SSF52151 206 305 7.15E-74 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 299 1.5E-95 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 Gene3D G3DSA:3.40.366.10 205 306 1.2E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 Gene3D G3DSA:3.40.366.10 3 125 1.2E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK58_RS07400 559afde169a87432fd054c0349f0cc94 318 PANTHER PTHR10982 1 316 3.1E-140 T 22-04-2016 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Pfam PF13181 Tetratricopeptide repeat 154 181 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Gene3D G3DSA:1.25.40.10 6 215 7.5E-37 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SMART SM00028 45 78 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SMART SM00028 116 149 33.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SMART SM00028 11 44 0.93 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SMART SM00028 82 115 1.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SMART SM00028 150 183 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 PANTHER PTHR23083 5 230 3.0E-24 T 22-04-2016 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SUPERFAMILY SSF48452 6 206 1.39E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 SUPERFAMILY SSF53756 454 589 8.9E-6 T 22-04-2016 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Pfam PF13844 Glycosyl transferase family 41 266 397 7.8E-31 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Pfam PF13844 Glycosyl transferase family 41 436 619 6.5E-16 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Pfam PF13176 Tetratricopeptide repeat 120 147 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS05440 fb4d405b37bae44a31dada5b8c0642c0 636 Pfam PF13432 Tetratricopeptide repeat 17 76 8.3E-5 T 22-04-2016 AMK58_RS16700 43fb3c393cb8d82b3e939c461cc8a580 134 Pfam PF12236 Bacteriophage head to tail connecting protein 1 134 6.8E-43 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type AMK58_RS04685 ff5cff28a6595df277389ae66a3c7580 143 Gene3D G3DSA:3.40.30.10 1 116 9.9E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS04685 ff5cff28a6595df277389ae66a3c7580 143 Pfam PF03960 ArsC family 58 112 4.7E-8 T 22-04-2016 IPR006660 Arsenate reductase-like AMK58_RS04685 ff5cff28a6595df277389ae66a3c7580 143 TIGRFAM TIGR01616 nitro_assoc: nitrogenase-associated protein 2 128 1.3E-56 T 22-04-2016 IPR006503 Nitrogenase-associated protein AMK58_RS04685 ff5cff28a6595df277389ae66a3c7580 143 SUPERFAMILY SSF52833 3 121 1.28E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS01030 7dd541c1a2b8b34a87160c7b7fcb184f 332 PANTHER PTHR30570:SF1 8 297 2.6E-34 T 22-04-2016 AMK58_RS01030 7dd541c1a2b8b34a87160c7b7fcb184f 332 PANTHER PTHR30570 8 297 2.6E-34 T 22-04-2016 AMK58_RS01030 7dd541c1a2b8b34a87160c7b7fcb184f 332 Gene3D G3DSA:3.40.190.10 16 171 9.9E-30 T 22-04-2016 AMK58_RS01030 7dd541c1a2b8b34a87160c7b7fcb184f 332 Pfam PF12849 PBP superfamily domain 7 295 2.7E-44 T 22-04-2016 IPR024370 PBP domain AMK58_RS01030 7dd541c1a2b8b34a87160c7b7fcb184f 332 SUPERFAMILY SSF53850 15 324 1.57E-68 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 PANTHER PTHR11606:SF1 95 519 0.0 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 PANTHER PTHR11606:SF1 544 754 0.0 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 Gene3D G3DSA:3.40.50.720 364 475 8.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 Gene3D G3DSA:3.40.50.720 521 602 8.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 SUPERFAMILY SSF53223 175 362 1.06E-23 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 PANTHER PTHR11606 95 519 0.0 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 PANTHER PTHR11606 544 754 0.0 T 22-04-2016 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 1 754 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 SUPERFAMILY SSF51735 367 469 2.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS27025 e7857d5d4b85075fed23dc8ecbb3d3c2 754 SUPERFAMILY SSF51735 505 703 2.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 PANTHER PTHR11496:SF73 1 360 8.8E-178 T 22-04-2016 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 346 5.4E-65 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 Gene3D G3DSA:1.20.1090.10 159 361 5.0E-66 T 22-04-2016 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 149 177 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 Gene3D G3DSA:3.40.50.1970 3 157 6.1E-42 T 22-04-2016 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 PANTHER PTHR11496 1 360 8.8E-178 T 22-04-2016 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 240 260 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 PIRSF PIRSF000112 1 359 4.9E-96 T 22-04-2016 AMK58_RS06790 41e17f88fdd21cdf6f5f27863495f7fa 363 SUPERFAMILY SSF56796 4 355 6.54E-87 T 22-04-2016 AMK58_RS02745 947692de8453c4c53f512be3f08a6ac6 71 Pfam PF13808 DDE_Tnp_1-associated 7 71 5.8E-19 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 PANTHER PTHR13734:SF45 110 232 2.7E-31 T 22-04-2016 AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 SUPERFAMILY SSF81891 126 229 3.01E-10 T 22-04-2016 AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 Pfam PF08335 GlnD PII-uridylyltransferase 2 83 2.1E-16 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 PANTHER PTHR13734 110 232 2.7E-31 T 22-04-2016 AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 232 84.24 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK58_RS28805 66e8c783ec8aa0e0da157edade7a709d 232 Gene3D G3DSA:1.10.3090.10 126 227 1.3E-4 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 Gene3D G3DSA:3.40.50.300 20 186 4.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 SUPERFAMILY SSF52540 19 186 1.15E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 Pfam PF01202 Shikimate kinase 28 184 1.5E-46 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 ProSitePatterns PS01128 Shikimate kinase signature. 75 101 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PANTHER PTHR21087:SF0 20 187 5.0E-54 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PRINTS PR01100 Shikimate kinase family signature 74 82 4.1E-20 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PRINTS PR01100 Shikimate kinase family signature 46 59 4.1E-20 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PRINTS PR01100 Shikimate kinase family signature 93 102 4.1E-20 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PRINTS PR01100 Shikimate kinase family signature 114 131 4.1E-20 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PRINTS PR01100 Shikimate kinase family signature 22 37 4.1E-20 T 22-04-2016 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 Hamap MF_00109 Shikimate kinase [aroK]. 19 185 28.378 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK58_RS12525 f6aed832c58c1cf738f8b89dfe366343 211 PANTHER PTHR21087 20 187 5.0E-54 T 22-04-2016 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 Gene3D G3DSA:1.10.3720.10 94 164 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 Gene3D G3DSA:1.10.3720.10 203 336 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 SUPERFAMILY SSF161098 203 324 1.57E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 SUPERFAMILY SSF161098 96 164 1.57E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 339 4.0E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 PANTHER PTHR30465 197 339 1.3E-109 T 22-04-2016 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 PANTHER PTHR30465 14 173 1.3E-109 T 22-04-2016 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 PANTHER PTHR30465:SF0 197 339 1.3E-109 T 22-04-2016 AMK58_RS13040 93c676389c1b2ccc953e5c6e7fd0d875 339 PANTHER PTHR30465:SF0 14 173 1.3E-109 T 22-04-2016 AMK58_RS05755 508f2921152a686a78460180544a3b0c 292 SUPERFAMILY SSF53335 64 227 8.26E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05755 508f2921152a686a78460180544a3b0c 292 Gene3D G3DSA:3.40.50.150 135 225 3.6E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS05755 508f2921152a686a78460180544a3b0c 292 Pfam PF08241 Methyltransferase domain 86 176 7.7E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK58_RS00825 d8f771e656ebab8b5a625f3ebe409e5a 197 Pfam PF12007 Protein of unknown function (DUF3501) 8 196 1.1E-61 T 22-04-2016 IPR021890 Protein of unknown function DUF3501 AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 PIRSF PIRSF015617 16 213 4.1E-70 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 42 213 7.8E-64 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 SUPERFAMILY SSF52540 23 213 6.25E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 Gene3D G3DSA:3.40.50.300 18 213 1.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 PANTHER PTHR30069 1 213 7.0E-61 T 22-04-2016 AMK58_RS08510 e817beced1f1bb900ca4a74a698cc47f 213 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 41 213 3.6E-70 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 SUPERFAMILY SSF52540 48 162 2.75E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 312 2.4E-57 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 330 34.048 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 PANTHER PTHR30160 18 310 1.4E-64 T 22-04-2016 AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 321 1.9E-89 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK58_RS10850 fce31bb5200e80bba7a0cfad16d8c815 336 PANTHER PTHR30160:SF13 18 310 1.4E-64 T 22-04-2016 AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 136 2.9E-51 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 SUPERFAMILY SSF52540 1 163 3.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 PANTHER PTHR19136:SF82 3 137 1.1E-24 T 22-04-2016 AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 PANTHER PTHR19136 3 137 1.1E-24 T 22-04-2016 AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 Gene3D G3DSA:3.40.50.300 1 163 9.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07965 63b45e15684841f64eafaddc95fa02e0 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 161 5.0E-47 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMK58_RS25340 4f8f3ba081aacf8393e3adad21406be3 97 SUPERFAMILY SSF52317 1 96 1.68E-23 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS25340 4f8f3ba081aacf8393e3adad21406be3 97 Gene3D G3DSA:3.40.50.880 1 97 1.8E-28 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS25340 4f8f3ba081aacf8393e3adad21406be3 97 PANTHER PTHR21235:SF1 1 97 5.0E-29 T 22-04-2016 AMK58_RS25340 4f8f3ba081aacf8393e3adad21406be3 97 Pfam PF00117 Glutamine amidotransferase class-I 11 81 4.4E-7 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS25340 4f8f3ba081aacf8393e3adad21406be3 97 PANTHER PTHR21235 1 97 5.0E-29 T 22-04-2016 AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.2E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.2E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.2E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 Gene3D G3DSA:3.40.50.720 2 250 1.3E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 2.2E-62 T 22-04-2016 AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 SUPERFAMILY SSF51735 1 250 4.17E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PANTHER PTHR24322 157 189 2.1E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS08930 72cb33e44f21a70f407dab2ee928f8ef 253 PANTHER PTHR24322 12 141 2.1E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 PANTHER PTHR24220 9 248 1.1E-129 T 22-04-2016 AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 PANTHER PTHR24220:SF366 9 248 1.1E-129 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 7 248 3.7E-114 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 SUPERFAMILY SSF52540 6 246 6.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 Gene3D G3DSA:3.40.50.300 4 245 2.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 Pfam PF00005 ABC transporter 23 178 3.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10600 7999596dc598f14e7ffd6ebfe31bc1c1 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 7.8E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS06245 7f0c3784d73e922c24632b5eaeaccd41 285 Gene3D G3DSA:3.40.50.1820 62 284 2.1E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06245 7f0c3784d73e922c24632b5eaeaccd41 285 PANTHER PTHR17630 73 284 2.8E-42 T 22-04-2016 AMK58_RS06245 7f0c3784d73e922c24632b5eaeaccd41 285 SUPERFAMILY SSF53474 62 284 2.21E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06245 7f0c3784d73e922c24632b5eaeaccd41 285 PANTHER PTHR17630:SF42 73 284 2.8E-42 T 22-04-2016 AMK58_RS06245 7f0c3784d73e922c24632b5eaeaccd41 285 Pfam PF01738 Dienelactone hydrolase family 75 282 5.4E-48 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK58_RS13320 87f21bd7a7ba1fab61b5f6474204550b 183 PANTHER PTHR30565 18 183 1.6E-52 T 22-04-2016 AMK58_RS13320 87f21bd7a7ba1fab61b5f6474204550b 183 PANTHER PTHR30565:SF1 18 183 1.6E-52 T 22-04-2016 AMK58_RS13320 87f21bd7a7ba1fab61b5f6474204550b 183 Gene3D G3DSA:1.20.1260.10 15 173 1.7E-44 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS13320 87f21bd7a7ba1fab61b5f6474204550b 183 SUPERFAMILY SSF47240 15 169 4.2E-41 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS13320 87f21bd7a7ba1fab61b5f6474204550b 183 Pfam PF05974 Domain of unknown function (DUF892) 17 170 1.1E-42 T 22-04-2016 IPR010287 Domain of unknown function DUF892 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 PANTHER PTHR11476:SF5 12 325 4.2E-42 T 22-04-2016 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 21 368 25.174 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 Gene3D G3DSA:3.30.930.10 25 322 1.2E-49 T 22-04-2016 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 PIRSF PIRSF001549 6 351 5.4E-40 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 Pfam PF13393 Histidyl-tRNA synthetase 14 321 6.2E-91 T 22-04-2016 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 SUPERFAMILY SSF55681 11 324 2.99E-46 T 22-04-2016 AMK58_RS09635 db5f6a186566942fe172b1c1d2a8c693 387 PANTHER PTHR11476 12 325 4.2E-42 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 41 0.009 T 22-04-2016 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 SUPERFAMILY SSF57840 1 41 1.31E-13 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 PANTHER PTHR18804:SF11 1 41 1.8E-15 T 22-04-2016 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 PANTHER PTHR18804 1 41 1.8E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.1E-7 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 Pfam PF00444 Ribosomal protein L36 1 41 4.0E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04805 767fc3b35d29d88c636759a03aeb7a4c 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.829 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 PANTHER PTHR22789 1 219 7.7E-80 T 22-04-2016 AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 Gene3D G3DSA:3.40.225.10 9 210 1.6E-60 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 SMART SM01007 11 185 9.5E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 SUPERFAMILY SSF53639 2 210 1.24E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 PANTHER PTHR22789:SF0 1 219 7.7E-80 T 22-04-2016 AMK58_RS04360 74ca7e49efea218a9b4552283dd09f2e 232 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 185 3.0E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 SUPERFAMILY SSF48613 207 328 2.22E-6 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 SMART SM01236 209 314 1.0E-23 T 22-04-2016 AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 Gene3D G3DSA:1.20.910.10 162 331 5.4E-21 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 Gene3D G3DSA:2.60.120.10 393 455 2.8E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 Pfam PF14518 Iron-containing redox enzyme 179 335 2.1E-30 T 22-04-2016 IPR028201 PqqC-like protein AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 Pfam PF07883 Cupin domain 398 455 1.0E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS02770 ab4091778e91637528fa62d6ef259d07 471 SUPERFAMILY SSF51182 395 455 1.27E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS08485 c005dedd10559344a14699073c497d26 241 Pfam PF04367 Protein of unknown function (DUF502) 85 187 3.4E-33 T 22-04-2016 IPR007462 Protein of unknown function DUF502 AMK58_RS08485 c005dedd10559344a14699073c497d26 241 PANTHER PTHR31876 1 223 4.8E-61 T 22-04-2016 AMK58_RS08485 c005dedd10559344a14699073c497d26 241 PANTHER PTHR31876:SF1 1 223 4.8E-61 T 22-04-2016 AMK58_RS09690 f1eb411daaf9439a0bef1d7da084a32b 364 Gene3D G3DSA:3.40.50.2300 15 146 9.5E-28 T 22-04-2016 AMK58_RS09690 f1eb411daaf9439a0bef1d7da084a32b 364 SMART SM00448 15 140 3.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09690 f1eb411daaf9439a0bef1d7da084a32b 364 SUPERFAMILY SSF52172 16 149 1.99E-29 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS09690 f1eb411daaf9439a0bef1d7da084a32b 364 Pfam PF00072 Response regulator receiver domain 17 137 1.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS09690 f1eb411daaf9439a0bef1d7da084a32b 364 PANTHER PTHR26402 15 150 2.2E-28 T 22-04-2016 AMK58_RS07250 9e8f6360cb71382bc844484df186c904 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 285 3.2E-54 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS07250 9e8f6360cb71382bc844484df186c904 301 PANTHER PTHR11795 1 301 2.7E-130 T 22-04-2016 AMK58_RS07250 9e8f6360cb71382bc844484df186c904 301 PANTHER PTHR11795:SF371 1 301 2.7E-130 T 22-04-2016 AMK58_RS07945 81ac80333a5f8b4c2fbc48a73d31bd5a 216 Gene3D G3DSA:2.20.110.10 59 156 6.2E-13 T 22-04-2016 AMK58_RS07945 81ac80333a5f8b4c2fbc48a73d31bd5a 216 SUPERFAMILY SSF82185 56 146 3.53E-13 T 22-04-2016 AMK58_RS07945 81ac80333a5f8b4c2fbc48a73d31bd5a 216 Pfam PF02493 MORN repeat 62 77 6.5 T 22-04-2016 IPR003409 MORN motif AMK58_RS07945 81ac80333a5f8b4c2fbc48a73d31bd5a 216 Pfam PF02493 MORN repeat 107 129 0.016 T 22-04-2016 IPR003409 MORN motif AMK58_RS07945 81ac80333a5f8b4c2fbc48a73d31bd5a 216 Pfam PF02493 MORN repeat 130 150 0.18 T 22-04-2016 IPR003409 MORN motif AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 PANTHER PTHR10357:SF137 445 607 3.1E-205 T 22-04-2016 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Pfam PF00128 Alpha amylase, catalytic domain 690 801 6.8E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Pfam PF11896 Domain of unknown function (DUF3416) 482 665 3.2E-52 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 480 1122 45.645 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Pfam PF14701 Glucanotransferase of human glycogen debranching enzyme 20 121 3.9E-11 T 22-04-2016 IPR032792 Glycogen debranching enzyme, glucanotransferase domain KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Gene3D G3DSA:3.20.20.80 615 1024 8.7E-68 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Gene3D G3DSA:3.20.20.80 16 336 4.0E-49 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Gene3D G3DSA:3.20.20.80 535 572 8.7E-68 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 SMART SM00642 13 347 1.2E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 SUPERFAMILY SSF51445 662 1025 4.49E-81 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 SUPERFAMILY SSF51445 15 353 4.23E-58 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 PANTHER PTHR10357:SF137 637 1124 3.1E-205 T 22-04-2016 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 PANTHER PTHR10357 445 607 3.1E-205 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 PANTHER PTHR10357 637 1124 3.1E-205 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS05675 72badf52c9ba837307c2fc898d5d5935 1125 Gene3D G3DSA:2.60.40.1180 1031 1111 4.9E-5 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 Pfam PF00005 ABC transporter 22 177 7.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 SUPERFAMILY SSF52540 4 246 8.15E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 246 2.1E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 PANTHER PTHR24220 7 252 1.2E-109 T 22-04-2016 AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 PANTHER PTHR24220:SF358 7 252 1.2E-109 T 22-04-2016 AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 Gene3D G3DSA:3.40.50.300 3 244 1.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11645 10a0e39b80b573579d6488a94a3c5be5 252 SMART SM00382 30 224 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03080 606c6f3146baff28ed9538cc769d50ca 397 PANTHER PTHR34219 1 371 6.3E-77 T 22-04-2016 AMK58_RS03080 606c6f3146baff28ed9538cc769d50ca 397 PANTHER PTHR34219:SF3 1 371 6.3E-77 T 22-04-2016 AMK58_RS03080 606c6f3146baff28ed9538cc769d50ca 397 Pfam PF03929 PepSY-associated TM region 12 359 1.0E-51 T 22-04-2016 IPR005625 PepSY-associated TM protein AMK58_RS07970 680aef57558275682d3da6d31f20dfe4 203 PANTHER PTHR14269 5 176 1.7E-43 T 22-04-2016 AMK58_RS07970 680aef57558275682d3da6d31f20dfe4 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.7E-16 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK58_RS07970 680aef57558275682d3da6d31f20dfe4 203 PIRSF PIRSF000847 1 190 4.0E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK58_RS07970 680aef57558275682d3da6d31f20dfe4 203 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 181 3.7E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK58_RS07970 680aef57558275682d3da6d31f20dfe4 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 Pfam PF01048 Phosphorylase superfamily 10 244 4.0E-44 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 10 246 1.0E-94 T 22-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 56 96 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 PANTHER PTHR11904:SF1 11 291 2.6E-131 T 22-04-2016 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 SUPERFAMILY SSF53167 8 275 2.23E-91 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 PANTHER PTHR11904 11 291 2.6E-131 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 Gene3D G3DSA:3.40.50.1580 6 268 2.2E-88 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK58_RS08410 ea3db5f67cf284deea9514c9bc553d97 294 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 8 275 41.775 T 22-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 AMK58_RS01580 c7e3f55e5d19a483b638794f1f89b12d 165 SUPERFAMILY SSF52540 30 136 4.78E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01580 c7e3f55e5d19a483b638794f1f89b12d 165 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 14 146 1.3E-28 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK58_RS01580 c7e3f55e5d19a483b638794f1f89b12d 165 PANTHER PTHR33540 1 142 1.8E-39 T 22-04-2016 AMK58_RS01580 c7e3f55e5d19a483b638794f1f89b12d 165 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 15 134 2.5E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK58_RS01580 c7e3f55e5d19a483b638794f1f89b12d 165 Gene3D G3DSA:3.40.50.300 11 154 7.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 PANTHER PTHR30124 50 319 1.1E-88 T 22-04-2016 AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 Pfam PF06725 3D domain 279 319 1.2E-6 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 PIRSF PIRSF019422 2 319 1.8E-116 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 Pfam PF03562 MltA specific insert domain 15 260 5.1E-85 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 SMART SM00925 103 260 1.0E-88 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 SUPERFAMILY SSF50685 3 319 2.83E-109 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 Gene3D G3DSA:2.40.40.10 4 168 1.4E-35 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 Gene3D G3DSA:2.40.40.10 171 319 2.5E-37 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK58_RS28245 1283cf3bfa253639e6d8febd68742107 319 PANTHER PTHR30124:SF0 50 319 1.1E-88 T 22-04-2016 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 SUPERFAMILY SSF161098 133 348 7.68E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 PANTHER PTHR30465 73 364 6.6E-201 T 22-04-2016 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 PANTHER PTHR30465 1 45 6.6E-201 T 22-04-2016 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 PANTHER PTHR30465:SF66 73 364 6.6E-201 T 22-04-2016 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 PANTHER PTHR30465:SF66 1 45 6.6E-201 T 22-04-2016 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 362 1.9E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11955 51cbbc282c563a6c8d6958112468a151 369 Gene3D G3DSA:1.10.3720.10 132 355 4.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS03545 47a941501e90e186112d4239cf2758b8 195 TIGRFAM TIGR03865 PQQ_CXXCW: PQQ-dependent catabolism-associated CXXCW motif protein 33 189 3.8E-58 T 22-04-2016 IPR022376 PQQ-dependent catabolism-associated CXXCW motif AMK58_RS03545 47a941501e90e186112d4239cf2758b8 195 Gene3D G3DSA:3.40.250.10 102 186 1.8E-10 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS03545 47a941501e90e186112d4239cf2758b8 195 SUPERFAMILY SSF52821 100 190 1.83E-14 T 22-04-2016 IPR001763 Rhodanese-like domain AMK58_RS10680 48d60cea046d29db48ad1e637f008a51 139 SUPERFAMILY SSF51182 22 130 2.8E-17 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS10680 48d60cea046d29db48ad1e637f008a51 139 Pfam PF07883 Cupin domain 55 120 4.7E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS10680 48d60cea046d29db48ad1e637f008a51 139 Gene3D G3DSA:2.60.120.10 14 130 2.2E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 PANTHER PTHR34354:SF1 3 147 1.6E-55 T 22-04-2016 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 68.103 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 23 133 1.3E-44 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 Gene3D G3DSA:3.30.1130.10 19 141 8.8E-45 T 22-04-2016 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 SUPERFAMILY SSF55620 24 141 5.26E-26 T 22-04-2016 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 PANTHER PTHR34354 3 147 1.6E-55 T 22-04-2016 AMK58_RS05260 68beb99d2688623480bea69ce18fc3f5 154 Pfam PF14489 QueF-like protein 58 136 6.2E-32 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 SUPERFAMILY SSF103481 179 275 4.32E-13 T 22-04-2016 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 Pfam PF00892 EamA-like transporter family 143 271 4.7E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 Pfam PF00892 EamA-like transporter family 3 133 5.2E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 SUPERFAMILY SSF103481 36 137 5.1E-16 T 22-04-2016 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 PANTHER PTHR22911:SF56 1 284 1.0E-63 T 22-04-2016 AMK58_RS01400 63d94a8865218d4873b9017dad2a956d 289 PANTHER PTHR22911 1 284 1.0E-63 T 22-04-2016 AMK58_RS00570 47c14613537e85452800c9d6b581eb12 199 PANTHER PTHR30086 1 198 3.0E-76 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS00570 47c14613537e85452800c9d6b581eb12 199 Pfam PF01810 LysE type translocator 13 198 7.4E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS00570 47c14613537e85452800c9d6b581eb12 199 PANTHER PTHR30086:SF0 1 198 3.0E-76 T 22-04-2016 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 SUPERFAMILY SSF56104 4 236 1.01E-76 T 22-04-2016 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 Pfam PF01259 SAICAR synthetase 6 235 2.3E-59 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 1.0E-62 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 PANTHER PTHR11609:SF2 3 238 2.0E-112 T 22-04-2016 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 PANTHER PTHR11609 3 238 2.0E-112 T 22-04-2016 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 Gene3D G3DSA:3.30.200.20 7 93 1.9E-35 T 22-04-2016 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 Gene3D G3DSA:3.30.470.20 94 223 1.2E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK58_RS11430 53d73d01db5d8a4ae062059cfa6c99ad 254 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 31.44 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 Pfam PF07732 Multicopper oxidase 163 268 1.2E-35 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 SUPERFAMILY SSF49503 269 387 4.02E-20 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 Pfam PF00394 Multicopper oxidase 277 388 1.8E-11 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 SUPERFAMILY SSF49503 166 287 2.81E-36 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 PANTHER PTHR11709 168 393 6.4E-62 T 22-04-2016 AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 Gene3D G3DSA:2.60.40.420 266 390 7.9E-25 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 Gene3D G3DSA:2.60.40.420 136 265 1.0E-32 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS28680 1aee67f0a18aee18aa87d23e9cc514a6 408 PANTHER PTHR11709:SF33 168 393 6.4E-62 T 22-04-2016 AMK58_RS04475 921a4f9cac0989db6df96e60c418613e 112 Gene3D G3DSA:3.30.1360.20 2 91 6.6E-26 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS04475 921a4f9cac0989db6df96e60c418613e 112 PANTHER PTHR12599 6 97 1.2E-22 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS04475 921a4f9cac0989db6df96e60c418613e 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 88 7.2E-27 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS04475 921a4f9cac0989db6df96e60c418613e 112 SUPERFAMILY SSF55248 4 92 3.66E-28 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 Pfam PF01883 Domain of unknown function DUF59 6 77 8.6E-21 T 22-04-2016 IPR002744 Domain of unknown function DUF59 AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 SUPERFAMILY SSF117916 2 93 2.22E-19 T 22-04-2016 AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 129 371 1.2E-105 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 ProSitePatterns PS01215 Mrp family signature. 235 251 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 Hamap MF_02040 Iron-sulfur cluster carrier protein. 123 372 38.769 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 SUPERFAMILY SSF52540 132 376 5.27E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 Gene3D G3DSA:3.40.50.300 120 370 8.8E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 PANTHER PTHR23264 1 74 1.5E-159 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK58_RS05475 866e27c25a03db3ccdfe66604bb6d572 391 PANTHER PTHR23264 91 376 1.5E-159 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK58_RS03575 6e8fa0b3ad4415a94587e2c91ed4d2bc 187 PANTHER PTHR33877 11 186 1.9E-67 T 22-04-2016 AMK58_RS03575 6e8fa0b3ad4415a94587e2c91ed4d2bc 187 SMART SM00507 79 132 1.9E-10 T 22-04-2016 IPR003615 HNH nuclease AMK58_RS03575 6e8fa0b3ad4415a94587e2c91ed4d2bc 187 Pfam PF14279 HNH endonuclease 92 142 5.8E-19 T 22-04-2016 IPR029471 HNH endonuclease 5 AMK58_RS03575 6e8fa0b3ad4415a94587e2c91ed4d2bc 187 PANTHER PTHR33877:SF2 11 186 1.9E-67 T 22-04-2016 AMK58_RS08550 bb2f1845715a9ae4ce1a67cc9882bb25 110 Pfam PF05239 PRC-barrel domain 18 82 1.9E-11 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS08550 bb2f1845715a9ae4ce1a67cc9882bb25 110 SUPERFAMILY SSF50346 14 97 8.44E-16 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS08550 bb2f1845715a9ae4ce1a67cc9882bb25 110 Gene3D G3DSA:2.30.30.240 16 71 2.3E-10 T 22-04-2016 AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 Gene3D G3DSA:3.30.450.20 24 111 4.0E-19 T 22-04-2016 AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 PANTHER PTHR32089:SF52 15 155 3.3E-16 T 22-04-2016 AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 Pfam PF00989 PAS fold 29 111 2.0E-11 T 22-04-2016 IPR013767 PAS fold GO:0006355 AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 SUPERFAMILY SSF55785 25 109 7.25E-24 T 22-04-2016 IPR000014 PAS domain AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 108 4.1E-13 T 22-04-2016 IPR000014 PAS domain AMK58_RS08095 e9c4c45b7efea6730840e553a1f246b0 183 PANTHER PTHR32089 15 155 3.3E-16 T 22-04-2016 AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 Pfam PF00565 Staphylococcal nuclease homologue 13 114 3.8E-11 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 SMART SM00318 2 115 1.4E-4 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 Gene3D G3DSA:2.40.50.90 3 116 4.7E-14 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 SUPERFAMILY SSF50199 2 117 2.75E-23 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 PANTHER PTHR12302:SF0 3 133 4.8E-22 T 22-04-2016 AMK58_RS05700 7ec3aba76fcc64ed80f58197a27adabe 133 PANTHER PTHR12302 3 133 4.8E-22 T 22-04-2016 AMK58_RS07795 5d67f062c23ca0b64037be2be2c4fabf 372 Gene3D G3DSA:3.40.50.300 23 206 1.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07795 5d67f062c23ca0b64037be2be2c4fabf 372 PANTHER PTHR11669:SF8 10 245 3.9E-48 T 22-04-2016 AMK58_RS07795 5d67f062c23ca0b64037be2be2c4fabf 372 Pfam PF13177 DNA polymerase III, delta subunit 27 207 1.3E-31 T 22-04-2016 AMK58_RS07795 5d67f062c23ca0b64037be2be2c4fabf 372 SUPERFAMILY SSF52540 23 246 1.82E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07795 5d67f062c23ca0b64037be2be2c4fabf 372 PANTHER PTHR11669 10 245 3.9E-48 T 22-04-2016 AMK58_RS12915 62471d5a3e745b1902c37543dd3e94ea 525 SUPERFAMILY SSF53756 326 504 1.53E-14 T 22-04-2016 AMK58_RS12915 62471d5a3e745b1902c37543dd3e94ea 525 Pfam PF13692 Glycosyl transferases group 1 351 473 4.7E-7 T 22-04-2016 AMK58_RS05065 f73797ccb3251f0cb2121e89d510ace2 255 SUPERFAMILY SSF88874 28 168 1.57E-27 T 22-04-2016 AMK58_RS05065 f73797ccb3251f0cb2121e89d510ace2 255 PANTHER PTHR34720 28 129 1.3E-19 T 22-04-2016 AMK58_RS05065 f73797ccb3251f0cb2121e89d510ace2 255 Pfam PF07484 Phage Tail Collar Domain 33 88 4.5E-20 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS05065 f73797ccb3251f0cb2121e89d510ace2 255 Gene3D G3DSA:3.90.1340.10 26 94 6.0E-24 T 22-04-2016 IPR011083 Phage tail collar domain AMK58_RS03605 49109f9c984bd402eb2aeb0cf939aeb5 430 PANTHER PTHR30510 1 430 3.3E-142 T 22-04-2016 AMK58_RS03605 49109f9c984bd402eb2aeb0cf939aeb5 430 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 428 37.568 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 AMK58_RS03605 49109f9c984bd402eb2aeb0cf939aeb5 430 Pfam PF04285 Protein of unknown function (DUF444) 3 426 1.8E-170 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 171 1.6E-53 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 SUPERFAMILY SSF52833 32 171 2.67E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 PANTHER PTHR10681:SF107 1 175 1.8E-50 T 22-04-2016 AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 PANTHER PTHR10681 1 175 1.8E-50 T 22-04-2016 AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 Gene3D G3DSA:3.40.30.10 7 173 4.4E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS01415 b2ffdfb509499035710c7a897f70153a 178 Pfam PF08534 Redoxin 38 163 4.9E-14 T 22-04-2016 IPR013740 Redoxin GO:0016491 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 29 238 5.5E-61 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 PANTHER PTHR10889:SF3 26 267 6.2E-87 T 22-04-2016 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 SUPERFAMILY SSF51569 27 255 2.72E-72 T 22-04-2016 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 PANTHER PTHR10889 26 267 6.2E-87 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 SMART SM01133 26 256 1.6E-63 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 Gene3D G3DSA:3.20.20.70 26 260 8.0E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS05610 d15b6aa3b19be2c45ccfdc78f3e72704 296 Pfam PF01791 DeoC/LacD family aldolase 30 253 4.9E-29 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK58_RS05200 e4dc31782e511b8851ca6ff9a8f12c32 1104 Pfam PF05170 AsmA family 3 191 9.4E-30 T 22-04-2016 IPR007844 AsmA AMK58_RS05200 e4dc31782e511b8851ca6ff9a8f12c32 1104 Pfam PF13502 AsmA-like C-terminal region 884 1086 5.4E-26 T 22-04-2016 IPR032712 AsmA-like, C-terminal AMK58_RS05200 e4dc31782e511b8851ca6ff9a8f12c32 1104 PANTHER PTHR30441 854 1070 1.2E-29 T 22-04-2016 AMK58_RS05200 e4dc31782e511b8851ca6ff9a8f12c32 1104 PANTHER PTHR30441 1 428 1.2E-29 T 22-04-2016 AMK58_RS03775 32ca9155351b3e3206ce70bd10309d27 385 Pfam PF11294 Protein of unknown function (DUF3095) 3 375 1.3E-95 T 22-04-2016 IPR021445 Protein of unknown function DUF3095 AMK58_RS00325 40003c55e922619745acad7547f45005 179 Pfam PF12100 Domain of unknown function (DUF3576) 72 171 7.7E-44 T 22-04-2016 IPR021959 Protein of unknown function DUF3576 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 Gene3D G3DSA:3.40.190.10 223 335 5.3E-25 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 Gene3D G3DSA:3.90.76.10 71 222 1.8E-31 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 519 1.0E-75 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 SUPERFAMILY SSF53850 398 604 9.59E-120 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 SUPERFAMILY SSF53850 56 368 9.59E-120 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 PANTHER PTHR30290 30 367 1.8E-175 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 PANTHER PTHR30290 392 603 1.8E-175 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 PANTHER PTHR30290:SF2 30 367 1.8E-175 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 PANTHER PTHR30290:SF2 392 603 1.8E-175 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 PIRSF PIRSF002741 28 605 2.8E-97 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 Gene3D G3DSA:3.10.105.10 336 369 5.5E-47 T 22-04-2016 AMK58_RS00860 3d404553b05eb98aa7f57693a2e11381 607 Gene3D G3DSA:3.10.105.10 403 574 5.5E-47 T 22-04-2016 AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 SUPERFAMILY SSF48008 82 212 4.97E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 PANTHER PTHR11751 21 102 5.0E-19 T 22-04-2016 AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 Gene3D G3DSA:1.10.10.10 6 77 2.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 SMART SM00895 86 208 4.1E-16 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 Gene3D G3DSA:1.20.120.530 80 212 2.7E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 SUPERFAMILY SSF46785 11 80 5.46E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 72 8.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 Pfam PF07729 FCD domain 86 207 2.5E-20 T 22-04-2016 IPR011711 GntR, C-terminal AMK58_RS11070 d3e2cf38f23a257972ae2477a7b48500 234 SMART SM00345 18 76 1.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK58_RS00680 92d6123157df66774e941aa10315d958 84 Gene3D G3DSA:3.30.110.40 4 84 1.2E-18 T 22-04-2016 IPR001455 TusA-like domain AMK58_RS00680 92d6123157df66774e941aa10315d958 84 Pfam PF01206 Sulfurtransferase TusA 11 83 4.4E-17 T 22-04-2016 IPR001455 TusA-like domain AMK58_RS00680 92d6123157df66774e941aa10315d958 84 SUPERFAMILY SSF64307 6 84 1.83E-16 T 22-04-2016 IPR001455 TusA-like domain AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PANTHER PTHR30376 1 280 1.2E-87 T 22-04-2016 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 SUPERFAMILY SSF88946 10 118 1.01E-35 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 12 281 4.4E-100 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 Gene3D G3DSA:1.10.10.10 223 280 1.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 279 9.4E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 Pfam PF04545 Sigma-70, region 4 227 278 7.4E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 Pfam PF04542 Sigma-70 region 2 50 115 1.3E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 SUPERFAMILY SSF88659 188 280 7.85E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PRINTS PR00046 Major sigma-70 factor signature 74 87 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PRINTS PR00046 Major sigma-70 factor signature 231 243 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PRINTS PR00046 Major sigma-70 factor signature 98 106 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PRINTS PR00046 Major sigma-70 factor signature 250 265 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 PRINTS PR00046 Major sigma-70 factor signature 265 276 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS07915 6cd272a8f859c6ddd9de7e3c7ae93c2a 296 Gene3D G3DSA:1.10.601.10 10 115 1.8E-36 T 22-04-2016 AMK58_RS11040 8a38d2bec9c295507cda28b0ed147b02 93 Pfam PF13937 Domain of unknown function (DUF4212) 15 91 1.0E-34 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted AMK58_RS11040 8a38d2bec9c295507cda28b0ed147b02 93 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 17 92 6.9E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 PANTHER PTHR11709 56 470 1.7E-79 T 22-04-2016 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 ProSitePatterns PS00080 Multicopper oxidases signature 2. 452 463 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Gene3D G3DSA:2.60.40.420 28 157 1.3E-32 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Gene3D G3DSA:2.60.40.420 346 470 3.6E-37 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Gene3D G3DSA:2.60.40.420 158 282 9.7E-25 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Pfam PF00394 Multicopper oxidase 169 280 2.2E-11 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 SUPERFAMILY SSF49503 58 179 3.76E-36 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 ProSitePatterns PS00079 Multicopper oxidases signature 1. 447 467 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 PANTHER PTHR11709:SF2 56 470 1.7E-79 T 22-04-2016 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 SUPERFAMILY SSF49503 161 319 2.89E-20 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Pfam PF07732 Multicopper oxidase 55 160 1.6E-35 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 Pfam PF07731 Multicopper oxidase 369 470 6.7E-26 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMK58_RS00960 4b1d387fd03f8ad2616c9d512fb062e0 471 SUPERFAMILY SSF49503 320 469 5.4E-30 T 22-04-2016 IPR008972 Cupredoxin AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 1 108 9.5E-52 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 Gene3D G3DSA:3.40.50.300 1 124 1.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 Gene3D G3DSA:1.10.8.300 143 200 4.9E-13 T 22-04-2016 AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 PANTHER PTHR11603:SF148 1 201 3.1E-82 T 22-04-2016 AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 PANTHER PTHR11603 1 201 3.1E-82 T 22-04-2016 AMK58_RS16915 a85f005f47bccee4fbc26b7074474ff8 201 SUPERFAMILY SSF52540 5 162 1.0E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 Gene3D G3DSA:2.160.10.10 19 204 1.1E-50 T 22-04-2016 AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 PANTHER PTHR23416 51 206 1.9E-65 T 22-04-2016 AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.1E-9 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 PANTHER PTHR23416:SF61 51 206 1.9E-65 T 22-04-2016 AMK58_RS00135 69606095824dc46a4d542d374ded1678 211 SUPERFAMILY SSF51161 20 204 1.52E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 PANTHER PTHR30026 1 455 5.8E-89 T 22-04-2016 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 31 444 2.8E-97 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 PANTHER PTHR30026:SF3 1 455 5.8E-89 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 Gene3D G3DSA:1.20.1600.10 30 432 4.1E-64 T 22-04-2016 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 SUPERFAMILY SSF56954 9 431 2.09E-77 T 22-04-2016 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 Pfam PF02321 Outer membrane efflux protein 34 222 2.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK58_RS07755 e086fb7ffb68a13c0d7979abd6000832 463 Pfam PF02321 Outer membrane efflux protein 241 415 8.8E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 SUPERFAMILY SSF69754 4 114 1.57E-17 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 SUPERFAMILY SSF50249 119 185 4.41E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 Pfam PF00313 'Cold-shock' DNA-binding domain 122 183 6.8E-8 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 Gene3D G3DSA:3.30.160.100 4 111 1.2E-17 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 Gene3D G3DSA:2.40.50.140 121 183 2.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK58_RS04170 7da96863d9f3d3d8e796a3af0100be5d 194 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 6 110 1.0E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK58_RS10045 200c28e6b3084245a03e5d217c836df1 167 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 6 144 1.9E-35 T 22-04-2016 IPR025690 Methyltransferase, putative AMK58_RS10045 200c28e6b3084245a03e5d217c836df1 167 SUPERFAMILY SSF53335 15 138 1.02E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS12215 4d435f8985decdae4513753235d5f46a 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 117 1.3E-5 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK58_RS12215 4d435f8985decdae4513753235d5f46a 125 Gene3D G3DSA:3.10.180.10 5 122 8.1E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS12215 4d435f8985decdae4513753235d5f46a 125 SUPERFAMILY SSF54593 7 124 1.24E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS12215 4d435f8985decdae4513753235d5f46a 125 PIRSF PIRSF039020 1 124 1.4E-45 T 22-04-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.719 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 Pfam PF00831 Ribosomal L29 protein 5 60 1.0E-26 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 PANTHER PTHR10916:SF0 1 68 1.5E-26 T 22-04-2016 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.5E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 Gene3D G3DSA:1.10.287.310 1 61 1.4E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 SUPERFAMILY SSF46561 1 63 1.31E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10365 548dc001470d42a452cc0f841e43aae5 68 PANTHER PTHR10916 1 68 1.5E-26 T 22-04-2016 AMK58_RS09985 2f1c077a83e8701465e31808235fce41 234 SUPERFAMILY SSF48097 117 199 2.5E-7 T 22-04-2016 IPR016137 RGS domain AMK58_RS09985 2f1c077a83e8701465e31808235fce41 234 Gene3D G3DSA:1.10.167.10 151 197 2.5E-4 T 22-04-2016 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 SUPERFAMILY SSF103088 226 343 3.92E-28 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 Gene3D G3DSA:3.30.1330.60 238 343 3.7E-28 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 SUPERFAMILY SSF56925 23 218 5.49E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 PRINTS PR01021 OMPA domain signature 243 265 3.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 PRINTS PR01021 OMPA domain signature 288 304 3.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 PRINTS PR01021 OMPA domain signature 273 288 3.9E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 Pfam PF13505 Outer membrane protein beta-barrel domain 10 213 1.3E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 Pfam PF00691 OmpA family 242 337 5.7E-18 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 PANTHER PTHR30128 238 344 6.9E-28 T 22-04-2016 AMK58_RS07290 960eba76756ae935ec342cdb4baf2bfe 346 Gene3D G3DSA:2.40.160.20 11 233 5.2E-34 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK58_RS03595 ae495ff138e5882a955cfd185f6cb649 129 Pfam PF00072 Response regulator receiver domain 10 121 1.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03595 ae495ff138e5882a955cfd185f6cb649 129 SUPERFAMILY SSF52172 7 127 2.7E-33 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS03595 ae495ff138e5882a955cfd185f6cb649 129 Gene3D G3DSA:3.40.50.2300 7 124 2.5E-33 T 22-04-2016 AMK58_RS03595 ae495ff138e5882a955cfd185f6cb649 129 SMART SM00448 8 124 4.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS03595 ae495ff138e5882a955cfd185f6cb649 129 PANTHER PTHR26402 8 121 2.4E-31 T 22-04-2016 AMK58_RS08065 396075823d2b1ea47bed2687d066f9f1 513 SMART SM00382 167 336 0.0035 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08065 396075823d2b1ea47bed2687d066f9f1 513 Pfam PF13401 AAA domain 167 317 4.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS08065 396075823d2b1ea47bed2687d066f9f1 513 SUPERFAMILY SSF52540 148 403 2.56E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08065 396075823d2b1ea47bed2687d066f9f1 513 Gene3D G3DSA:3.40.50.300 147 302 4.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04960 4131637da552895e19875806e670dc98 118 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 43 116 1.6E-41 T 22-04-2016 IPR020955 Uncharacterised protein family Atu4866 AMK58_RS13680 8a09a59e32c82b09a0ae31bba3fb91b5 206 PANTHER PTHR34989 6 196 1.5E-28 T 22-04-2016 AMK58_RS13680 8a09a59e32c82b09a0ae31bba3fb91b5 206 Pfam PF03729 Short repeat of unknown function (DUF308) 87 152 1.8E-12 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane AMK58_RS13680 8a09a59e32c82b09a0ae31bba3fb91b5 206 Pfam PF03729 Short repeat of unknown function (DUF308) 141 188 2.6E-4 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane AMK58_RS13680 8a09a59e32c82b09a0ae31bba3fb91b5 206 Pfam PF03729 Short repeat of unknown function (DUF308) 29 78 1.5E-7 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane AMK58_RS13680 8a09a59e32c82b09a0ae31bba3fb91b5 206 PANTHER PTHR34989:SF1 6 196 1.5E-28 T 22-04-2016 AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 135 219 1.1E-12 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 SUPERFAMILY SSF52172 1 83 4.55E-20 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 PANTHER PTHR21021 80 214 1.5E-18 T 22-04-2016 AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 Pfam PF00072 Response regulator receiver domain 1 61 4.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 PANTHER PTHR21021:SF19 80 214 1.5E-18 T 22-04-2016 AMK58_RS17410 be8108fbb04fe4e54d342464e663d208 219 Gene3D G3DSA:3.40.50.2300 1 75 2.5E-17 T 22-04-2016 AMK58_RS07170 6ab11cc184ea058ac64c9da56403b963 276 Pfam PF00535 Glycosyl transferase family 2 12 126 1.7E-5 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS07170 6ab11cc184ea058ac64c9da56403b963 276 PANTHER PTHR22916 9 232 4.2E-26 T 22-04-2016 AMK58_RS07170 6ab11cc184ea058ac64c9da56403b963 276 Gene3D G3DSA:3.90.550.10 11 227 8.9E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07170 6ab11cc184ea058ac64c9da56403b963 276 SUPERFAMILY SSF53448 9 224 2.65E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07170 6ab11cc184ea058ac64c9da56403b963 276 PANTHER PTHR22916:SF4 9 232 4.2E-26 T 22-04-2016 AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 SUPERFAMILY SSF103088 74 185 1.44E-28 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 Gene3D G3DSA:3.30.1330.60 80 185 2.1E-28 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 PRINTS PR01021 OMPA domain signature 117 132 4.0E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 PRINTS PR01021 OMPA domain signature 87 109 4.0E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 PRINTS PR01021 OMPA domain signature 132 148 4.0E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 PANTHER PTHR30128 68 186 3.3E-29 T 22-04-2016 AMK58_RS06745 c395cb30f10ffb539e11a8d5270d1e32 195 Pfam PF00691 OmpA family 86 181 3.1E-18 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS06640 8586fd880091be2f0ff5e24e892e1f64 629 Pfam PF00072 Response regulator receiver domain 506 617 9.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06640 8586fd880091be2f0ff5e24e892e1f64 629 Gene3D G3DSA:3.40.50.2300 503 623 4.7E-31 T 22-04-2016 AMK58_RS06640 8586fd880091be2f0ff5e24e892e1f64 629 SUPERFAMILY SSF52172 504 622 1.42E-32 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06640 8586fd880091be2f0ff5e24e892e1f64 629 PANTHER PTHR26402 504 617 3.1E-32 T 22-04-2016 AMK58_RS06640 8586fd880091be2f0ff5e24e892e1f64 629 SMART SM00448 504 617 3.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06170 da83b3715c0b893ce106209b16842dff 102 PANTHER PTHR11434 5 102 5.2E-42 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK58_RS06170 da83b3715c0b893ce106209b16842dff 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 19.608 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK58_RS06170 da83b3715c0b893ce106209b16842dff 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 3.7E-24 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 Pfam PF00005 ABC transporter 22 165 2.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 5 241 1.3E-104 T 22-04-2016 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 SUPERFAMILY SSF52540 4 225 5.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 SMART SM00382 31 214 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 PANTHER PTHR24220 7 224 6.5E-78 T 22-04-2016 AMK58_RS03480 e8c0510fe72b43e4c996438294f82cd7 246 Gene3D G3DSA:3.40.50.300 2 228 6.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02340 f5975342bcd6ba9cef1b526bf9db44a8 219 Pfam PF09335 SNARE associated Golgi protein 51 171 5.5E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS02340 f5975342bcd6ba9cef1b526bf9db44a8 219 PANTHER PTHR30353:SF8 7 216 1.1E-31 T 22-04-2016 AMK58_RS02340 f5975342bcd6ba9cef1b526bf9db44a8 219 PANTHER PTHR30353 7 216 1.1E-31 T 22-04-2016 IPR032818 DedA family AMK58_RS00605 3f6490d75bbff8aacc6129daaa8d417f 180 Pfam PF10003 Integral membrane protein (DUF2244) 28 166 5.6E-52 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane AMK58_RS00605 3f6490d75bbff8aacc6129daaa8d417f 180 PIRSF PIRSF032162 6 175 1.8E-49 T 22-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane AMK58_RS09210 594ca1bb14cda25b92aa0a7992436d70 146 Pfam PF00583 Acetyltransferase (GNAT) family 59 120 3.4E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS09210 594ca1bb14cda25b92aa0a7992436d70 146 SUPERFAMILY SSF55729 14 141 4.22E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS09210 594ca1bb14cda25b92aa0a7992436d70 146 PANTHER PTHR23091 39 144 4.1E-13 T 22-04-2016 AMK58_RS09210 594ca1bb14cda25b92aa0a7992436d70 146 PANTHER PTHR23091:SF259 39 144 4.1E-13 T 22-04-2016 AMK58_RS09210 594ca1bb14cda25b92aa0a7992436d70 146 Gene3D G3DSA:3.40.630.30 44 141 9.2E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS14420 f7e1feba2c6dacfc819e2c9320beda07 201 SUPERFAMILY SSF53613 2 199 1.59E-42 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS14420 f7e1feba2c6dacfc819e2c9320beda07 201 PANTHER PTHR10584 1 201 1.2E-55 T 22-04-2016 AMK58_RS14420 f7e1feba2c6dacfc819e2c9320beda07 201 Pfam PF00294 pfkB family carbohydrate kinase 2 199 4.1E-27 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK58_RS14420 f7e1feba2c6dacfc819e2c9320beda07 201 Gene3D G3DSA:3.40.1190.20 1 200 8.2E-41 T 22-04-2016 IPR029056 Ribokinase-like AMK58_RS14420 f7e1feba2c6dacfc819e2c9320beda07 201 PANTHER PTHR10584:SF153 1 201 1.2E-55 T 22-04-2016 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 PANTHER PTHR32071:SF33 1 255 1.2E-135 T 22-04-2016 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 99 114 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 Gene3D G3DSA:3.40.50.300 10 185 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 Gene3D G3DSA:1.10.8.60 186 260 6.8E-23 T 22-04-2016 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 Pfam PF00158 Sigma-54 interaction domain 14 180 8.7E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 PANTHER PTHR32071 1 255 1.2E-135 T 22-04-2016 AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 SMART SM00382 33 176 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS22580 5ec45f29df4be34baeb620f7af8f9a57 292 SUPERFAMILY SSF52540 13 255 1.38E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 PANTHER PTHR36573 3 201 4.3E-32 T 22-04-2016 AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 PIRSF PIRSF004649 2 205 3.4E-39 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 Gene3D G3DSA:3.10.450.50 116 170 1.7E-15 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 Gene3D G3DSA:3.10.450.50 33 72 1.7E-15 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 Gene3D G3DSA:1.10.10.640 171 203 9.3E-22 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 Gene3D G3DSA:1.10.10.640 73 113 9.3E-22 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical AMK58_RS08825 f974c479a335b7e355ff40d5eaccae87 205 Pfam PF05494 MlaC protein 40 199 2.3E-47 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMK58_RS11170 e271a0236270c68eab9582043c124e1c 200 Pfam PF11659 Protein of unknown function (DUF3261) 11 161 1.7E-22 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 AMK58_RS27720 c6287a6db0f8e368c56ab668f5cc3471 275 Pfam PF13175 AAA ATPase domain 5 219 5.6E-19 T 22-04-2016 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 2.3E-31 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 Gene3D G3DSA:1.10.1040.10 170 290 1.9E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 SUPERFAMILY SSF51735 11 168 2.51E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 PANTHER PTHR22981:SF48 12 290 4.0E-96 T 22-04-2016 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 Gene3D G3DSA:3.40.50.720 11 168 2.4E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 PIRSF PIRSF000103 7 292 4.7E-70 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 11 167 8.5E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 PANTHER PTHR22981 12 290 4.0E-96 T 22-04-2016 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 14 27 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMK58_RS02650 f3aa016ba4ffd11df4983a56630540a9 292 SUPERFAMILY SSF48179 168 290 3.74E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK58_RS13140 543ca61d9dbcab3947731efb7c6e07ee 223 PANTHER PTHR31088:SF7 2 217 3.8E-68 T 22-04-2016 AMK58_RS13140 543ca61d9dbcab3947731efb7c6e07ee 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.3E-84 T 22-04-2016 IPR014319 Phage shock protein, PspA AMK58_RS13140 543ca61d9dbcab3947731efb7c6e07ee 223 PANTHER PTHR31088 2 217 3.8E-68 T 22-04-2016 AMK58_RS13140 543ca61d9dbcab3947731efb7c6e07ee 223 Pfam PF04012 PspA/IM30 family 2 216 4.5E-38 T 22-04-2016 IPR007157 PspA/IM30 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 2.0E-7 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 PANTHER PTHR21109 2 66 6.6E-30 T 22-04-2016 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 7.5E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 13.58 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 7.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 7.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 7.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 PANTHER PTHR21109:SF3 2 66 6.6E-30 T 22-04-2016 AMK58_RS05405 60173b8c9a5ff196cd993a3bad3d9e73 67 Pfam PF01165 Ribosomal protein S21 2 55 2.8E-20 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 361 1.8E-143 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 SUPERFAMILY SSF53659 2 368 1.21E-113 T 22-04-2016 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 PANTHER PTHR11835:SF35 1 371 1.7E-182 T 22-04-2016 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 PANTHER PTHR11835 1 371 1.7E-182 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 Gene3D G3DSA:3.40.718.10 1 366 1.8E-120 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 366 49.484 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 362 4.2E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS02505 957ff736da893516f0d2ca273013c004 371 SMART SM01329 6 362 1.4E-183 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 PANTHER PTHR14136 37 229 9.0E-35 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 PANTHER PTHR14136 304 392 9.0E-35 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 SUPERFAMILY SSF141571 34 122 1.31E-22 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 PANTHER PTHR14136:SF0 37 229 9.0E-35 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 PANTHER PTHR14136:SF0 304 392 9.0E-35 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 189 221 8.7E-10 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 323 360 9.3E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 149 188 1.0E-7 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 379 418 1.2E-8 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 78 114 9.7E-11 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 Pfam PF00805 Pentapeptide repeats (8 copies) 284 320 8.2E-5 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 SUPERFAMILY SSF141571 144 226 8.11E-20 T 22-04-2016 AMK58_RS02005 8f54f6cb7b36e106746c3e35b1811c13 424 SUPERFAMILY SSF141571 281 421 3.63E-27 T 22-04-2016 AMK58_RS02450 3f46a43c8b34ee836a2eba3f8ad138d9 190 PANTHER PTHR36917:SF1 2 190 1.4E-48 T 22-04-2016 AMK58_RS02450 3f46a43c8b34ee836a2eba3f8ad138d9 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 7 179 1.8E-50 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 AMK58_RS02450 3f46a43c8b34ee836a2eba3f8ad138d9 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 5 179 17.723 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 AMK58_RS02450 3f46a43c8b34ee836a2eba3f8ad138d9 190 Pfam PF04279 Intracellular septation protein A 6 176 4.1E-55 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 AMK58_RS02450 3f46a43c8b34ee836a2eba3f8ad138d9 190 PANTHER PTHR36917 2 190 1.4E-48 T 22-04-2016 AMK58_RS10135 2033610d9bbcfef2cb4db3bfd377c591 319 Gene3D G3DSA:1.25.60.10 217 297 9.3E-5 T 22-04-2016 AMK58_RS10135 2033610d9bbcfef2cb4db3bfd377c591 319 SUPERFAMILY SSF158791 250 306 1.2E-6 T 22-04-2016 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 PANTHER PTHR20941 122 385 2.4E-105 T 22-04-2016 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 125 140 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 PANTHER PTHR20941:SF1 122 385 2.4E-105 T 22-04-2016 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 SUPERFAMILY SSF51717 118 381 8.11E-94 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 125 378 1.6E-92 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 Pfam PF00809 Pterin binding enzyme 126 365 3.7E-76 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 Gene3D G3DSA:3.20.20.20 120 381 3.8E-100 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS05985 0b653953fd54fe11e89119271e4444f2 386 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 159 172 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 Gene3D G3DSA:3.10.580.10 470 591 6.0E-10 T 22-04-2016 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 SUPERFAMILY SSF81340 28 462 3.14E-78 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 SUPERFAMILY SSF54631 470 599 4.95E-9 T 22-04-2016 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 PANTHER PTHR11689 27 613 9.5E-39 T 22-04-2016 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 PRINTS PR00762 Chloride channel signature 142 161 5.9E-5 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 PRINTS PR00762 Chloride channel signature 193 212 5.9E-5 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 Pfam PF00654 Voltage gated chloride channel 100 439 9.3E-55 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 Gene3D G3DSA:1.10.3080.10 36 459 7.6E-51 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK58_RS05660 4de9899d25c81475f7213806cfe43e15 613 PANTHER PTHR11689:SF14 27 613 9.5E-39 T 22-04-2016 AMK58_RS07775 84bba3510d4438aa55b30e095211e21a 277 Gene3D G3DSA:3.40.50.620 76 219 6.8E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07775 84bba3510d4438aa55b30e095211e21a 277 PANTHER PTHR30336:SF1 3 266 8.4E-47 T 22-04-2016 AMK58_RS07775 84bba3510d4438aa55b30e095211e21a 277 Pfam PF02698 DUF218 domain 80 249 9.6E-24 T 22-04-2016 IPR003848 Domain of unknown function DUF218 AMK58_RS07775 84bba3510d4438aa55b30e095211e21a 277 PANTHER PTHR30336 3 266 8.4E-47 T 22-04-2016 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 Gene3D G3DSA:3.40.640.10 54 247 4.8E-54 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 PANTHER PTHR11751 8 359 6.7E-67 T 22-04-2016 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 SUPERFAMILY SSF53383 6 360 1.22E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 360 48.246 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 Pfam PF00155 Aminotransferase class I and II 50 355 1.8E-40 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 PANTHER PTHR11751:SF347 8 359 6.7E-67 T 22-04-2016 AMK58_RS07680 924c495e206efee1346b569d1b9aa895 361 Gene3D G3DSA:3.90.1150.10 248 359 4.6E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 PANTHER PTHR11079 8 151 6.1E-38 T 22-04-2016 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 151 43.495 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 SUPERFAMILY SSF53927 7 150 9.21E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 Pfam PF14437 MafB19-like deaminase 11 113 5.2E-22 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMK58_RS11315 7bd26e4622598a7a801cdf99044959a5 151 Gene3D G3DSA:3.40.140.10 7 149 3.3E-50 T 22-04-2016 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 PANTHER PTHR12526:SF295 1 487 1.0E-138 T 22-04-2016 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 PANTHER PTHR12526 1 487 1.0E-138 T 22-04-2016 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 Hamap MF_00484 Glycogen synthase [glgA]. 1 486 45.509 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 SUPERFAMILY SSF53756 3 488 1.74E-119 T 22-04-2016 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 Pfam PF00534 Glycosyl transferases group 1 300 458 9.2E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 485 2.7E-161 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 Gene3D G3DSA:3.40.50.2000 259 468 7.8E-71 T 22-04-2016 AMK58_RS01310 8d477ac73e531db1cc37bdabdf289b7a 492 Pfam PF08323 Starch synthase catalytic domain 2 245 8.6E-71 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK58_RS05000 5043270d77809a29f20a98b9c24c1c76 134 PANTHER PTHR26402 11 134 9.9E-31 T 22-04-2016 AMK58_RS05000 5043270d77809a29f20a98b9c24c1c76 134 Pfam PF00072 Response regulator receiver domain 13 127 1.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS05000 5043270d77809a29f20a98b9c24c1c76 134 Gene3D G3DSA:3.40.50.2300 10 133 1.5E-31 T 22-04-2016 AMK58_RS05000 5043270d77809a29f20a98b9c24c1c76 134 SUPERFAMILY SSF52172 10 132 1.57E-32 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS05000 5043270d77809a29f20a98b9c24c1c76 134 SMART SM00448 11 127 1.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 SUPERFAMILY SSF109635 5 97 1.7E-32 T 22-04-2016 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 19 128 3.5E-43 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 PANTHER PTHR33823 1 137 8.1E-42 T 22-04-2016 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 15 137 27.979 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 PANTHER PTHR33823:SF2 1 137 8.1E-42 T 22-04-2016 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 101 125 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 SUPERFAMILY SSF57716 98 136 2.42E-8 T 22-04-2016 AMK58_RS10180 1b47747c970bcbe68ae0abe96940c693 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 96 131 7.9E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMK58_RS03680 12e88e74aad784bd4da3fa8ad1e30df0 370 PANTHER PTHR21716 21 370 1.4E-85 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS03680 12e88e74aad784bd4da3fa8ad1e30df0 370 PANTHER PTHR21716:SF16 21 370 1.4E-85 T 22-04-2016 AMK58_RS03680 12e88e74aad784bd4da3fa8ad1e30df0 370 Pfam PF01594 Domain of unknown function DUF20 37 358 7.8E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK58_RS10880 3e2468d16f2252f6a4514fae90cfa593 63 SUPERFAMILY SSF160113 7 54 1.31E-13 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 AMK58_RS10880 3e2468d16f2252f6a4514fae90cfa593 63 Pfam PF07411 Domain of unknown function (DUF1508) 15 53 1.8E-12 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 AMK58_RS10880 3e2468d16f2252f6a4514fae90cfa593 63 Gene3D G3DSA:3.30.160.160 8 53 4.4E-18 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 PANTHER PTHR22912 13 91 1.7E-20 T 22-04-2016 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 Gene3D G3DSA:3.50.50.60 372 441 2.2E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 Gene3D G3DSA:3.50.50.60 25 77 2.2E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 Gene3D G3DSA:3.50.50.60 125 199 2.2E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 SUPERFAMILY SSF51905 392 444 1.12E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 SUPERFAMILY SSF51905 21 242 1.12E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 Pfam PF12831 FAD dependent oxidoreductase 28 462 1.4E-118 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS07880 1bd3f6b7d1f1f18e646c94c2cfea6eb4 474 PANTHER PTHR22912:SF179 13 91 1.7E-20 T 22-04-2016 AMK58_RS00820 b90cf9ca95de57db7743b055dfc455ed 139 PANTHER PTHR33746 1 139 6.5E-55 T 22-04-2016 AMK58_RS00820 b90cf9ca95de57db7743b055dfc455ed 139 Gene3D G3DSA:1.20.1260.10 1 137 1.9E-53 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS00820 b90cf9ca95de57db7743b055dfc455ed 139 SUPERFAMILY SSF47240 3 138 2.25E-42 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS00820 b90cf9ca95de57db7743b055dfc455ed 139 PANTHER PTHR33746:SF3 1 139 6.5E-55 T 22-04-2016 AMK58_RS00820 b90cf9ca95de57db7743b055dfc455ed 139 Pfam PF02915 Rubrerythrin 11 133 1.0E-27 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 PANTHER PTHR30446:SF0 1 197 9.9E-94 T 22-04-2016 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 95.879 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 SMART SM00493 79 164 9.1E-4 T 22-04-2016 IPR006171 Toprim domain AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 PANTHER PTHR30446 1 197 9.9E-94 T 22-04-2016 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 Pfam PF02132 RecR protein 41 77 3.5E-12 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 SUPERFAMILY SSF111304 3 197 4.97E-69 T 22-04-2016 IPR023627 Recombination protein RecR AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 TIGRFAM TIGR00615 recR: recombination protein RecR 4 195 1.3E-64 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK58_RS11885 154313338cadcd9ad4490d67a95119cd 197 Pfam PF13662 Toprim domain 79 170 1.7E-23 T 22-04-2016 IPR006171 Toprim domain AMK58_RS08225 f8cbaea443a16d47607b6a9c9cf664f7 165 Pfam PF06073 Bacterial protein of unknown function (DUF934) 51 156 2.3E-36 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 AMK58_RS08225 f8cbaea443a16d47607b6a9c9cf664f7 165 PIRSF PIRSF030820 2 164 3.1E-44 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 Gene3D G3DSA:3.40.50.2000 177 370 1.9E-8 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 PANTHER PTHR12526 135 232 3.8E-23 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 PANTHER PTHR12526 260 320 3.8E-23 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 PANTHER PTHR12526 337 394 3.8E-23 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 SUPERFAMILY SSF53756 130 216 7.33E-31 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 SUPERFAMILY SSF53756 247 394 7.33E-31 T 22-04-2016 AMK58_RS04470 f39e5efe9994b763e7ebab322d962161 394 Pfam PF13524 Glycosyl transferases group 1 281 384 2.3E-9 T 22-04-2016 AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 Gene3D G3DSA:3.40.50.10540 297 352 5.0E-82 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 Gene3D G3DSA:3.40.50.10540 4 215 5.0E-82 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 Pfam PF02515 CoA-transferase family III 6 336 4.1E-96 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 PANTHER PTHR24023:SF545 86 366 1.1E-39 T 22-04-2016 AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 Gene3D G3DSA:3.30.1540.10 229 296 9.1E-13 T 22-04-2016 AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 SUPERFAMILY SSF89796 3 360 2.88E-99 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS10885 0a1eab3f673e45769833f735c65a4a06 370 PANTHER PTHR24023 86 366 1.1E-39 T 22-04-2016 AMK58_RS08145 769a78c131a054fe44ee537db1919047 170 Pfam PF13279 Thioesterase-like superfamily 32 163 1.8E-24 T 22-04-2016 AMK58_RS08145 769a78c131a054fe44ee537db1919047 170 PANTHER PTHR12475 18 165 8.9E-37 T 22-04-2016 AMK58_RS08145 769a78c131a054fe44ee537db1919047 170 SUPERFAMILY SSF54637 27 163 4.89E-24 T 22-04-2016 IPR029069 HotDog domain AMK58_RS08145 769a78c131a054fe44ee537db1919047 170 Gene3D G3DSA:3.10.129.10 28 163 1.1E-19 T 22-04-2016 IPR029069 HotDog domain AMK58_RS13005 7ad94cc5a528accb8082135eefef38ae 258 Pfam PF14907 Uncharacterised nucleotidyltransferase 28 180 2.1E-7 T 22-04-2016 AMK58_RS13005 7ad94cc5a528accb8082135eefef38ae 258 SUPERFAMILY SSF81301 28 151 1.46E-11 T 22-04-2016 AMK58_RS03125 297b5f364bbd49914c0bf2a934071e8b 156 Pfam PF14316 Domain of unknown function (DUF4381) 9 150 8.8E-41 T 22-04-2016 IPR025489 Protein of unknown function (DUF4381 AMK58_RS06555 24f1ae84040d28172019d042fd8ef988 470 SUPERFAMILY SSF52540 202 388 2.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06555 24f1ae84040d28172019d042fd8ef988 470 Gene3D G3DSA:3.40.50.300 204 280 1.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 SUPERFAMILY SSF51690 106 269 6.67E-40 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 SUPERFAMILY SSF54675 3 105 1.11E-20 T 22-04-2016 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 Gene3D G3DSA:3.90.1170.20 5 124 1.3E-25 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 Gene3D G3DSA:3.20.20.70 125 261 1.3E-35 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 257 4.3E-27 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 PANTHER PTHR11948 1 273 4.0E-47 T 22-04-2016 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 104 5.5E-18 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 PANTHER PTHR11948:SF1 1 273 4.0E-47 T 22-04-2016 AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 PIRSF PIRSF006250 1 274 1.9E-56 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AMK58_RS01475 35c8a786f4ad078c7c7ad25035276287 275 TIGRFAM TIGR01334 modD: modD protein 2 272 5.0E-79 T 22-04-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.- AMK58_RS03330 beeb240abcccd4e741b1d13440dd8054 151 PANTHER PTHR33452:SF6 1 151 1.1E-36 T 22-04-2016 AMK58_RS03330 beeb240abcccd4e741b1d13440dd8054 151 Pfam PF07681 DoxX 23 105 9.2E-20 T 22-04-2016 IPR032808 DoxX family AMK58_RS03330 beeb240abcccd4e741b1d13440dd8054 151 PANTHER PTHR33452 1 151 1.1E-36 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 25 205 9.2E-46 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 SMART SM00833 292 386 1.4E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748 23 232 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748 248 267 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748 288 387 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 Gene3D G3DSA:3.30.1220.10 275 387 4.3E-32 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 292 385 2.2E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 SUPERFAMILY SSF52540 23 214 2.28E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 Gene3D G3DSA:3.40.50.300 23 224 6.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748:SF43 23 232 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748:SF43 248 267 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 PANTHER PTHR13748:SF43 288 387 1.7E-91 T 22-04-2016 AMK58_RS09065 c2ea1b6770b62d8b925cb844e2737536 393 SUPERFAMILY SSF90002 292 386 5.1E-21 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK58_RS10805 e758debba9c43151987ebb811f4c66dd 370 Pfam PF12275 Protein of unknown function (DUF3616) 25 350 1.3E-122 T 22-04-2016 IPR022060 Protein of unknown function DUF3616 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 167 2.9E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 Gene3D G3DSA:1.10.1740.10 11 100 2.1E-11 T 22-04-2016 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 PANTHER PTHR30173 12 171 1.5E-32 T 22-04-2016 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 Pfam PF04542 Sigma-70 region 2 15 81 6.6E-9 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 SUPERFAMILY SSF88659 94 170 2.16E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 SUPERFAMILY SSF88946 12 92 2.24E-11 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 Pfam PF08281 Sigma-70, region 4 113 164 7.5E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK58_RS03095 77850c4d2dfb43c0b6c59f01bb9431be 174 Gene3D G3DSA:1.10.10.10 105 169 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 Gene3D G3DSA:3.20.20.70 1 215 5.4E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 44.523 T 22-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 PANTHER PTHR10683 1 212 5.1E-80 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 Pfam PF00923 Transaldolase 3 213 4.8E-60 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 4.3E-89 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK58_RS11800 8883db6b04a131b2bb42c2f5d257df06 218 SUPERFAMILY SSF51569 1 216 1.67E-78 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 PANTHER PTHR30290:SF2 40 375 1.6E-208 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 PANTHER PTHR30290:SF2 400 622 1.6E-208 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 SUPERFAMILY SSF53850 63 610 2.9E-122 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 Gene3D G3DSA:3.10.105.10 343 580 3.1E-37 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 Gene3D G3DSA:3.40.190.10 231 342 6.3E-25 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 Gene3D G3DSA:3.90.76.10 78 230 1.7E-33 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 PANTHER PTHR30290 40 375 1.6E-208 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 PANTHER PTHR30290 400 622 1.6E-208 T 22-04-2016 AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 523 8.8E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK58_RS11950 a77452ea6e2dad724ef90ef4afefedd2 628 PIRSF PIRSF002741 22 615 2.4E-101 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK58_RS19335 4aa1994e80e64711cf0c3129afd30669 79 SUPERFAMILY SSF52418 1 78 4.32E-20 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS19335 4aa1994e80e64711cf0c3129afd30669 79 PANTHER PTHR10515:SF0 1 79 3.5E-32 T 22-04-2016 AMK58_RS19335 4aa1994e80e64711cf0c3129afd30669 79 Gene3D G3DSA:3.40.1030.10 2 79 4.6E-29 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK58_RS19335 4aa1994e80e64711cf0c3129afd30669 79 PANTHER PTHR10515 1 79 3.5E-32 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 SUPERFAMILY SSF81442 24 481 1.13E-122 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 220 275 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 PANTHER PTHR10422:SF21 10 475 1.2E-260 T 22-04-2016 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 PANTHER PTHR10422 10 475 1.2E-260 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 Gene3D G3DSA:1.20.210.10 25 483 6.5E-73 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 27 460 1.1E-116 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS00980 1ae3eb394fbb31f89adc7f451822af85 498 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 24 488 6.8E-225 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK58_RS23525 f1f3ffa3ee79bac3f649357b5d3db893 363 PANTHER PTHR11606 158 297 3.3E-29 T 22-04-2016 AMK58_RS23525 f1f3ffa3ee79bac3f649357b5d3db893 363 PANTHER PTHR11606:SF1 158 297 3.3E-29 T 22-04-2016 AMK58_RS23525 f1f3ffa3ee79bac3f649357b5d3db893 363 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 223 353 5.3E-39 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK58_RS04380 22f0bb4542251d2bd4955237d89d87f5 216 Pfam PF00430 ATP synthase B/B' CF(0) 65 193 4.6E-18 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS04380 22f0bb4542251d2bd4955237d89d87f5 216 Hamap MF_01398 ATP synthase subunit b [atpF]. 56 210 10.067 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS09560 4e4ef5fbafd06a69186b271f50c29ed3 691 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 25 672 3.6E-170 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 PANTHER PTHR32089 158 509 2.5E-17 T 22-04-2016 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 SUPERFAMILY SSF158472 181 231 1.23E-11 T 22-04-2016 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 SMART SM00331 278 506 6.3E-7 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 PANTHER PTHR32089:SF27 158 509 2.5E-17 T 22-04-2016 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 303 506 6.3E-21 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 SMART SM00304 181 233 5.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS09135 873bbf2d8e2e10fa6742e5a5439b677d 524 Pfam PF00672 HAMP domain 163 229 6.3E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 3.0E-27 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 Gene3D G3DSA:3.40.190.10 126 202 1.6E-12 T 22-04-2016 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 SUPERFAMILY SSF53850 26 256 2.43E-46 T 22-04-2016 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 Gene3D G3DSA:3.40.190.10 225 248 5.9E-15 T 22-04-2016 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 Gene3D G3DSA:3.40.190.10 34 125 5.9E-15 T 22-04-2016 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 PANTHER PTHR30085 5 309 5.8E-172 T 22-04-2016 AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 SMART SM00062 35 265 2.2E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS07660 63ad3d44e7ae840252660a987d16ed2a 340 PANTHER PTHR30085:SF5 5 309 5.8E-172 T 22-04-2016 AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 SMART SM00382 28 207 2.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 Pfam PF00005 ABC transporter 21 160 5.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 SUPERFAMILY SSF52540 9 195 1.93E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 Gene3D G3DSA:3.40.50.300 13 191 1.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 PANTHER PTHR24220 5 195 1.4E-69 T 22-04-2016 AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 203 4.6E-63 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AMK58_RS01540 a5a6dbe926d8f90e1c2c04f5d3348d2d 229 PANTHER PTHR24220:SF508 5 195 1.4E-69 T 22-04-2016 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 89 8.2E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 PANTHER PTHR23426 3 108 7.7E-48 T 22-04-2016 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 SUPERFAMILY SSF54292 1 101 3.77E-33 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 Gene3D G3DSA:3.10.20.30 1 101 3.1E-42 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 PRINTS PR00355 Adrenodoxin signature 58 72 2.9E-11 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 PRINTS PR00355 Adrenodoxin signature 81 89 2.9E-11 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 PRINTS PR00355 Adrenodoxin signature 39 49 2.9E-11 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK58_RS04925 e3dad41a4e52ac496c7d9f4112652c9d 109 PANTHER PTHR23426:SF25 3 108 7.7E-48 T 22-04-2016 AMK58_RS12210 584d9495bf576b387995a9c2d986a801 146 Gene3D G3DSA:3.10.590.10 9 141 7.3E-37 T 22-04-2016 IPR002740 EVE domain AMK58_RS12210 584d9495bf576b387995a9c2d986a801 146 Pfam PF01878 EVE domain 10 139 2.6E-14 T 22-04-2016 IPR002740 EVE domain AMK58_RS12210 584d9495bf576b387995a9c2d986a801 146 SUPERFAMILY SSF88697 10 141 7.45E-28 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS12210 584d9495bf576b387995a9c2d986a801 146 Hamap MF_00771 UPF0310 protein . 7 141 28.352 T 22-04-2016 IPR022996 Uncharacterised protein family UPF0310 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 Gene3D G3DSA:1.20.1250.20 16 197 2.9E-23 T 22-04-2016 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 PANTHER PTHR11360 12 417 1.1E-93 T 22-04-2016 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 Pfam PF07690 Major Facilitator Superfamily 25 274 2.0E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 SUPERFAMILY SSF103473 12 418 1.7E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 Gene3D G3DSA:1.20.1250.20 222 420 8.5E-18 T 22-04-2016 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 16 419 3.4E-200 T 22-04-2016 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 AMK58_RS06870 dc877244e62949754bbff9a2538c3968 433 PANTHER PTHR11360:SF3 12 417 1.1E-93 T 22-04-2016 AMK58_RS09950 1a3b397d5ee8306cbe71d6f30f4ad9d4 202 PIRSF PIRSF033239 1 200 8.7E-46 T 22-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMK58_RS09950 1a3b397d5ee8306cbe71d6f30f4ad9d4 202 Pfam PF06055 Exopolysaccharide synthesis, ExoD 10 187 1.4E-52 T 22-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMK58_RS09950 1a3b397d5ee8306cbe71d6f30f4ad9d4 202 PANTHER PTHR41795 1 202 1.2E-24 T 22-04-2016 AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Pfam PF13245 Part of AAA domain 34 107 1.8E-7 T 22-04-2016 AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Gene3D G3DSA:3.40.50.300 30 246 1.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Gene3D G3DSA:3.40.50.300 247 296 2.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Gene3D G3DSA:3.40.50.300 443 489 2.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Gene3D G3DSA:3.40.50.300 602 630 2.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 Gene3D G3DSA:3.40.50.300 534 570 2.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 SUPERFAMILY SSF52540 510 571 3.72E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 SUPERFAMILY SSF52540 603 629 3.72E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 SUPERFAMILY SSF52540 29 301 3.72E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02870 2422ccd5e97624f210a742221bffdf81 652 SUPERFAMILY SSF52540 445 480 3.72E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13260 6b90b37ffde53be93c80aa8a5b823e32 603 PANTHER PTHR16631:SF5 34 313 2.5E-66 T 22-04-2016 AMK58_RS13260 6b90b37ffde53be93c80aa8a5b823e32 603 Pfam PF00332 Glycosyl hydrolases family 17 226 303 4.8E-7 T 22-04-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 AMK58_RS13260 6b90b37ffde53be93c80aa8a5b823e32 603 SUPERFAMILY SSF51445 37 303 2.23E-54 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS13260 6b90b37ffde53be93c80aa8a5b823e32 603 Gene3D G3DSA:3.20.20.80 54 303 2.8E-32 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS13260 6b90b37ffde53be93c80aa8a5b823e32 603 PANTHER PTHR16631 34 313 2.5E-66 T 22-04-2016 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 Gene3D G3DSA:1.10.730.10 19 199 8.2E-62 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 Pfam PF08264 Anticodon-binding domain of tRNA 60 206 2.6E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 SUPERFAMILY SSF47323 31 281 1.18E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 PANTHER PTHR11946:SF5 1 243 1.1E-83 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 PANTHER PTHR11946:SF5 262 295 1.1E-83 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 PANTHER PTHR11946 1 243 1.1E-83 T 22-04-2016 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 PANTHER PTHR11946 262 295 1.1E-83 T 22-04-2016 AMK58_RS21335 ad03a123db2f8f1d00ef83c59aefd95a 295 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 266 295 6.1E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK58_RS12845 6338b894096dabd0d03d9103f9ea55a0 298 SUPERFAMILY SSF53335 35 220 1.47E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS12845 6338b894096dabd0d03d9103f9ea55a0 298 Pfam PF13489 Methyltransferase domain 35 192 8.3E-12 T 22-04-2016 AMK58_RS12845 6338b894096dabd0d03d9103f9ea55a0 298 PANTHER PTHR13090 4 291 3.0E-122 T 22-04-2016 AMK58_RS12845 6338b894096dabd0d03d9103f9ea55a0 298 Gene3D G3DSA:3.40.50.150 34 268 8.6E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 Pfam PF00547 Urease, gamma subunit 1 99 9.9E-48 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 SUPERFAMILY SSF54111 1 100 6.02E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 PANTHER PTHR33569:SF1 2 100 1.8E-44 T 22-04-2016 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 PIRSF PIRSF001223 1 100 1.7E-51 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.78 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 Gene3D G3DSA:3.30.280.10 1 100 1.3E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.8E-48 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 PANTHER PTHR33569 2 100 1.8E-44 T 22-04-2016 AMK58_RS07075 2a8fcbfc26ac1d371178a7e1de531e0e 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 25 99 4.0E-33 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK58_RS10970 6ed767cea1d384d843232cb13803534c 231 SUPERFAMILY SSF53271 17 224 7.47E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS10970 6ed767cea1d384d843232cb13803534c 231 Pfam PF00156 Phosphoribosyl transferase domain 59 164 7.0E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS10970 6ed767cea1d384d843232cb13803534c 231 Gene3D G3DSA:3.40.50.2020 14 222 2.0E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS10970 6ed767cea1d384d843232cb13803534c 231 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 231 28.64 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS10970 6ed767cea1d384d843232cb13803534c 231 PANTHER PTHR19278 18 218 3.7E-38 T 22-04-2016 AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 215 3.2E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 216 41.803 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 PANTHER PTHR10285 11 205 7.1E-79 T 22-04-2016 AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 Gene3D G3DSA:3.40.50.2020 9 216 6.7E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 216 1.2E-74 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK58_RS12595 d6c85347a19296b7285474c2f0ccc78b 216 SUPERFAMILY SSF53271 10 214 1.88E-60 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 PANTHER PTHR37164 2 132 6.1E-25 T 22-04-2016 AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 2.5E-12 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 128 2.9E-33 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 Gene3D G3DSA:1.20.120.50 1 128 5.9E-34 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS03880 a41acf5c87ecd282460e98a88e918617 132 SUPERFAMILY SSF47188 1 128 5.23E-31 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 SUPERFAMILY SSF52402 1 143 1.0E-12 T 22-04-2016 AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 Gene3D G3DSA:3.40.50.620 2 143 4.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 Gene3D G3DSA:3.40.50.620 205 272 2.2E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 Pfam PF00582 Universal stress protein family 3 143 2.7E-6 T 22-04-2016 IPR006016 UspA GO:0006950 AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 Pfam PF00582 Universal stress protein family 155 272 4.7E-7 T 22-04-2016 IPR006016 UspA GO:0006950 AMK58_RS07595 c3a93e283ecca1af9e34da84797585ed 274 SUPERFAMILY SSF52402 154 273 2.6E-17 T 22-04-2016 AMK58_RS08545 693af26c7b52feb3c3e8850b905788e3 139 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK58_RS08545 693af26c7b52feb3c3e8850b905788e3 139 Pfam PF00472 RF-1 domain 7 133 1.3E-23 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK58_RS08545 693af26c7b52feb3c3e8850b905788e3 139 Gene3D G3DSA:3.30.160.200 2 108 3.5E-31 T 22-04-2016 AMK58_RS08545 693af26c7b52feb3c3e8850b905788e3 139 PANTHER PTHR11075 8 134 2.3E-38 T 22-04-2016 AMK58_RS08545 693af26c7b52feb3c3e8850b905788e3 139 SUPERFAMILY SSF110916 14 100 3.01E-13 T 22-04-2016 AMK58_RS01665 7ac873f5fbfd439d16d7c75e2ba81b35 169 SUPERFAMILY SSF56524 50 168 6.15E-15 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS01665 7ac873f5fbfd439d16d7c75e2ba81b35 169 Pfam PF00174 Oxidoreductase molybdopterin binding domain 75 138 2.4E-5 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS01665 7ac873f5fbfd439d16d7c75e2ba81b35 169 Gene3D G3DSA:3.90.420.10 76 138 4.2E-5 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS09415 a3936e745b2c19bae0b962b6ffa001f2 521 Gene3D G3DSA:3.40.640.10 107 312 1.0E-31 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS09415 a3936e745b2c19bae0b962b6ffa001f2 521 PANTHER PTHR11773 74 509 1.7E-202 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK58_RS09415 a3936e745b2c19bae0b962b6ffa001f2 521 Pfam PF02347 Glycine cleavage system P-protein 73 409 1.4E-10 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK58_RS09415 a3936e745b2c19bae0b962b6ffa001f2 521 SUPERFAMILY SSF53383 66 510 8.01E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS00545 3c785f02b66d4de1ca8705a5401913f1 194 Pfam PF01713 Smr domain 100 183 9.4E-26 T 22-04-2016 IPR002625 Smr domain AMK58_RS00545 3c785f02b66d4de1ca8705a5401913f1 194 PANTHER PTHR35562:SF2 1 193 3.0E-39 T 22-04-2016 AMK58_RS00545 3c785f02b66d4de1ca8705a5401913f1 194 SUPERFAMILY SSF160443 98 183 4.18E-17 T 22-04-2016 IPR002625 Smr domain AMK58_RS00545 3c785f02b66d4de1ca8705a5401913f1 194 PANTHER PTHR35562 1 193 3.0E-39 T 22-04-2016 AMK58_RS00545 3c785f02b66d4de1ca8705a5401913f1 194 SMART SM00463 97 183 3.5E-8 T 22-04-2016 IPR002625 Smr domain AMK58_RS28575 49724991d158215a8119ec688ffac710 170 Gene3D G3DSA:3.90.1570.10 74 161 1.2E-12 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 AMK58_RS28575 49724991d158215a8119ec688ffac710 170 SUPERFAMILY SSF52980 77 164 7.51E-10 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS28575 49724991d158215a8119ec688ffac710 170 Pfam PF05685 Putative restriction endonuclease 84 162 1.2E-8 T 22-04-2016 IPR008538 Domain of unknown function DUF820 AMK58_RS03590 c0d892281600b1873fa8581d8e751ffe 282 Gene3D G3DSA:3.90.79.10 85 265 4.9E-47 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS03590 c0d892281600b1873fa8581d8e751ffe 282 PANTHER PTHR13622:SF8 86 282 1.1E-65 T 22-04-2016 AMK58_RS03590 c0d892281600b1873fa8581d8e751ffe 282 Pfam PF15916 Domain of unknown function (DUF4743) 3 114 1.6E-22 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 AMK58_RS03590 c0d892281600b1873fa8581d8e751ffe 282 SUPERFAMILY SSF55811 88 262 5.28E-17 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS03590 c0d892281600b1873fa8581d8e751ffe 282 PANTHER PTHR13622 86 282 1.1E-65 T 22-04-2016 AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 SUPERFAMILY SSF53335 51 276 4.41E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 Gene3D G3DSA:3.40.50.150 222 264 6.6E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 Gene3D G3DSA:3.40.50.150 45 167 6.6E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 Pfam PF13649 Methyltransferase domain 58 158 9.1E-17 T 22-04-2016 AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 PANTHER PTHR10108:SF705 212 268 4.6E-18 T 22-04-2016 AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 PANTHER PTHR10108:SF705 58 171 4.6E-18 T 22-04-2016 AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 PANTHER PTHR10108 212 268 4.6E-18 T 22-04-2016 AMK58_RS02030 5bea6bfb5f2cc0dfc117c7d2a2d57893 283 PANTHER PTHR10108 58 171 4.6E-18 T 22-04-2016 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 PANTHER PTHR30425:SF2 4 59 3.9E-93 T 22-04-2016 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 PANTHER PTHR30425:SF2 169 420 3.9E-93 T 22-04-2016 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 179 418 1.5E-65 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 PANTHER PTHR30425 4 59 3.9E-93 T 22-04-2016 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 PANTHER PTHR30425 169 420 3.9E-93 T 22-04-2016 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 218 417 2.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 Gene3D G3DSA:1.10.3720.10 36 61 3.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 Gene3D G3DSA:1.10.3720.10 179 420 3.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 SUPERFAMILY SSF161098 195 414 4.71E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS01040 6e3e7cb08a709bf441477ee4037adb07 421 Pfam PF11812 Domain of unknown function (DUF3333) 17 155 7.4E-51 T 22-04-2016 IPR024573 Domain of unknown function DUF3333 AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 ProSitePatterns PS00622 LuxR-type HTH domain signature. 294 321 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 Gene3D G3DSA:3.30.450.20 152 229 8.8E-5 T 22-04-2016 AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 Pfam PF00196 Bacterial regulatory proteins, luxR family 280 332 1.3E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 Gene3D G3DSA:1.10.10.10 260 337 1.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 SUPERFAMILY SSF46894 273 336 3.03E-9 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK58_RS13635 519d2351a7ee30943b0f8c2888ab7c59 380 SMART SM00421 277 334 4.0E-4 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK58_RS05710 3f30d3c155bd810f228aadba6760e29f 85 Pfam PF04226 Transglycosylase associated protein 33 79 1.6E-14 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 AMK58_RS05710 3f30d3c155bd810f228aadba6760e29f 85 PANTHER PTHR33884 1 84 7.5E-35 T 22-04-2016 AMK58_RS05710 3f30d3c155bd810f228aadba6760e29f 85 PANTHER PTHR33884:SF1 1 84 7.5E-35 T 22-04-2016 AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 Pfam PF13545 Crp-like helix-turn-helix domain 160 223 5.5E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 Pfam PF00027 Cyclic nucleotide-binding domain 39 126 1.0E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 PANTHER PTHR24567:SF29 36 217 7.7E-33 T 22-04-2016 AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 PANTHER PTHR24567 36 217 7.7E-33 T 22-04-2016 AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 SUPERFAMILY SSF46785 158 224 6.62E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 Gene3D G3DSA:1.10.10.10 159 218 1.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 Gene3D G3DSA:2.60.120.10 16 154 2.2E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 SUPERFAMILY SSF51206 16 154 1.83E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK58_RS12360 05e47f3801fae8659352912e6a0ed6e8 230 SMART SM00419 169 217 2.5E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 PANTHER PTHR30137:SF2 3 331 7.3E-146 T 22-04-2016 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 Gene3D G3DSA:3.20.20.30 6 335 1.0E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 11 330 1.8E-139 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 Pfam PF00296 Luciferase-like monooxygenase 24 307 2.7E-36 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 SUPERFAMILY SSF51679 11 330 7.2E-87 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK58_RS12970 9c9f7ceb81fee8fcc97d5301af26e505 339 PANTHER PTHR30137 3 331 7.3E-146 T 22-04-2016 AMK58_RS09545 6b671c248367232249b0d812686cb0fe 445 Pfam PF11902 Protein of unknown function (DUF3422) 18 439 1.3E-170 T 22-04-2016 IPR021830 Protein of unknown function DUF3422 AMK58_RS03495 ce54d1adb92be485587179f825c91dde 147 SUPERFAMILY SSF46626 10 144 1.58E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03495 ce54d1adb92be485587179f825c91dde 147 Gene3D G3DSA:1.10.760.10 54 146 5.8E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03495 ce54d1adb92be485587179f825c91dde 147 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 17 147 1.5E-63 T 22-04-2016 IPR030991 Cytochrome c-550 PedF AMK58_RS03495 ce54d1adb92be485587179f825c91dde 147 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 64 141 2.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 Pfam PF01145 SPFH domain / Band 7 family 27 197 1.3E-32 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 SMART SM00244 23 181 1.5E-55 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PANTHER PTHR10264:SF27 2 333 1.9E-123 T 22-04-2016 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PANTHER PTHR10264 2 333 1.9E-123 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 SUPERFAMILY SSF117892 54 188 1.57E-40 T 22-04-2016 IPR001107 Band 7 domain AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PRINTS PR00721 Stomatin signature 176 197 3.53E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PRINTS PR00721 Stomatin signature 78 99 3.53E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PRINTS PR00721 Stomatin signature 113 130 3.53E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PRINTS PR00721 Stomatin signature 157 175 3.53E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 PRINTS PR00721 Stomatin signature 133 156 3.53E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK58_RS03675 3967a33f810caffbb7b0f041648c654f 350 ProSitePatterns PS01270 Band 7 protein family signature. 137 165 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 PIRSF PIRSF031890 4 224 4.3E-75 T 22-04-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 ProDom PD111165 RP434 8 217 1.0E-10 T 22-04-2016 AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 Pfam PF04280 Tim44-like domain 77 220 1.2E-48 T 22-04-2016 IPR007379 Tim44-like domain AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 SMART SM00978 76 222 8.2E-52 T 22-04-2016 IPR007379 Tim44-like domain AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 PANTHER PTHR10721 72 221 5.4E-34 T 22-04-2016 AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 PANTHER PTHR10721:SF2 72 221 5.4E-34 T 22-04-2016 AMK58_RS00465 8f1c9c5c774a237371b970b6fa631a64 224 SUPERFAMILY SSF54427 19 221 1.31E-52 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 SUPERFAMILY SSF51011 461 542 1.94E-11 T 22-04-2016 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Pfam PF16657 Maltogenic Amylase, C-terminal domain 461 539 1.5E-7 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Gene3D G3DSA:2.60.40.1180 461 542 1.1E-8 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Gene3D G3DSA:3.90.400.10 106 173 8.7E-23 T 22-04-2016 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Gene3D G3DSA:3.20.20.80 8 105 2.7E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Gene3D G3DSA:3.20.20.80 181 454 2.7E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 SMART SM00642 14 416 1.0E-89 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 SUPERFAMILY SSF51445 353 458 2.98E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 SUPERFAMILY SSF51445 5 320 2.98E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 Pfam PF00128 Alpha amylase, catalytic domain 29 384 1.8E-76 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 PANTHER PTHR10357 437 542 8.2E-202 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 PANTHER PTHR10357 5 400 8.2E-202 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 PANTHER PTHR10357:SF164 437 542 8.2E-202 T 22-04-2016 AMK58_RS11290 385024c2a929dc25c52a0e245308c96c 562 PANTHER PTHR10357:SF164 5 400 8.2E-202 T 22-04-2016 AMK58_RS09945 4c4f347b60db02a05b2f075721642fb2 126 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 12 87 6.7E-5 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMK58_RS09945 4c4f347b60db02a05b2f075721642fb2 126 SUPERFAMILY SSF51735 6 103 1.92E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09945 4c4f347b60db02a05b2f075721642fb2 126 Gene3D G3DSA:3.40.50.720 6 87 1.5E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS09075 17f4d6e123c00fc05b7976109685a403 338 Gene3D G3DSA:3.90.550.10 30 232 7.6E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS09075 17f4d6e123c00fc05b7976109685a403 338 SUPERFAMILY SSF53448 26 239 4.59E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS09075 17f4d6e123c00fc05b7976109685a403 338 Pfam PF00535 Glycosyl transferase family 2 29 195 1.4E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS09075 17f4d6e123c00fc05b7976109685a403 338 PANTHER PTHR22916:SF29 27 235 2.1E-35 T 22-04-2016 AMK58_RS09075 17f4d6e123c00fc05b7976109685a403 338 PANTHER PTHR22916 27 235 2.1E-35 T 22-04-2016 AMK58_RS02490 b5e83826e168e6ca016162a60f017dec 316 PANTHER PTHR10859 5 304 8.4E-75 T 22-04-2016 AMK58_RS02490 b5e83826e168e6ca016162a60f017dec 316 PANTHER PTHR10859:SF95 5 304 8.4E-75 T 22-04-2016 AMK58_RS02490 b5e83826e168e6ca016162a60f017dec 316 Pfam PF00535 Glycosyl transferase family 2 7 157 2.2E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS02490 b5e83826e168e6ca016162a60f017dec 316 Gene3D G3DSA:3.90.550.10 2 115 4.2E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS02490 b5e83826e168e6ca016162a60f017dec 316 SUPERFAMILY SSF53448 2 243 1.97E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 35 213 2.6E-43 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 SUPERFAMILY SSF52402 29 212 1.83E-46 T 22-04-2016 AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 PANTHER PTHR11807:SF2 16 257 1.6E-60 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 Gene3D G3DSA:3.40.50.620 31 185 1.4E-13 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 PANTHER PTHR11807 16 257 1.6E-60 T 22-04-2016 AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 19 306 19.489 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK58_RS06505 4769a739c6f8baf674eb9972cafa05cb 452 Pfam PF01171 PP-loop family 35 213 6.3E-49 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK58_RS02300 6cee96595e69ffcf1c20bc517a757b13 156 SUPERFAMILY SSF46785 5 132 3.29E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS02300 6cee96595e69ffcf1c20bc517a757b13 156 PANTHER PTHR33202 1 132 1.2E-35 T 22-04-2016 AMK58_RS02300 6cee96595e69ffcf1c20bc517a757b13 156 Pfam PF01475 Ferric uptake regulator family 11 130 7.7E-37 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK58_RS02300 6cee96595e69ffcf1c20bc517a757b13 156 Gene3D G3DSA:1.10.10.10 3 81 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05455 dd9e86ab1ba90e153af3ba90cedf0638 322 PANTHER PTHR35271 1 321 7.4E-76 T 22-04-2016 AMK58_RS05455 dd9e86ab1ba90e153af3ba90cedf0638 322 SUPERFAMILY SSF53822 35 287 3.47E-24 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS05455 dd9e86ab1ba90e153af3ba90cedf0638 322 Gene3D G3DSA:3.40.50.2300 155 286 4.5E-50 T 22-04-2016 AMK58_RS05455 dd9e86ab1ba90e153af3ba90cedf0638 322 Pfam PF04392 ABC transporter substrate binding protein 28 319 5.7E-107 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein AMK58_RS05455 dd9e86ab1ba90e153af3ba90cedf0638 322 Gene3D G3DSA:3.40.50.2300 26 154 3.8E-57 T 22-04-2016 AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 Pfam PF00929 Exonuclease 13 194 1.1E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 PANTHER PTHR30231 43 198 2.3E-27 T 22-04-2016 AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 Gene3D G3DSA:3.30.420.10 10 198 3.0E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 38 201 8.2E-29 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 SMART SM00479 11 203 6.9E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS02880 6d8387dfb908379c4ee43aa0352a67a1 210 SUPERFAMILY SSF53098 10 197 6.17E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 Gene3D G3DSA:3.65.10.10 228 425 5.4E-55 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 Gene3D G3DSA:3.65.10.10 21 227 2.8E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 SUPERFAMILY SSF55205 1 426 1.26E-134 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 424 7.6E-170 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 415 4.8E-96 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 PANTHER PTHR21090 1 428 3.1E-183 T 22-04-2016 AMK58_RS09205 9cdc1d788f984fbaf470c8cda1fa6477 430 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 425 45.76 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 Pfam PF06508 Queuosine biosynthesis protein QueC 6 220 1.1E-76 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 PANTHER PTHR11587 1 228 7.4E-110 T 22-04-2016 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 226 55.095 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 Gene3D G3DSA:3.40.50.620 5 228 4.8E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 PANTHER PTHR11587:SF3 1 228 7.4E-110 T 22-04-2016 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 213 8.5E-62 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 PIRSF PIRSF006293 2 230 4.9E-78 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK58_RS11625 61916432ccaac8ac821f12de157e0588 231 SUPERFAMILY SSF52402 5 228 6.62E-61 T 22-04-2016 AMK58_RS01120 826e37b38a3bd926f868ceed8803c9b6 401 Pfam PF00950 ABC 3 transport family 24 288 3.7E-55 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK58_RS01120 826e37b38a3bd926f868ceed8803c9b6 401 Gene3D G3DSA:1.10.3470.10 61 284 6.4E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK58_RS01120 826e37b38a3bd926f868ceed8803c9b6 401 PANTHER PTHR30477 10 321 1.8E-73 T 22-04-2016 AMK58_RS01120 826e37b38a3bd926f868ceed8803c9b6 401 PANTHER PTHR30477:SF3 10 321 1.8E-73 T 22-04-2016 AMK58_RS01120 826e37b38a3bd926f868ceed8803c9b6 401 SUPERFAMILY SSF81345 28 284 1.31E-25 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK58_RS15620 2a1f7c87710f8f679b6f6ef7c415b716 274 SUPERFAMILY SSF52540 1 63 5.04E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05695 4f22d549f0e84dcb33e226b2c2bee221 236 SUPERFAMILY SSF143081 2 224 3.14E-78 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS05695 4f22d549f0e84dcb33e226b2c2bee221 236 Pfam PF02586 SOS response associated peptidase (SRAP) 1 213 1.2E-68 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS05695 4f22d549f0e84dcb33e226b2c2bee221 236 PANTHER PTHR13604 2 225 1.5E-84 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS05695 4f22d549f0e84dcb33e226b2c2bee221 236 Gene3D G3DSA:3.90.1680.10 1 223 8.5E-76 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK58_RS04825 54fc312319edd0b8d5fb75fb6c021c90 249 PIRSF PIRSF000851 16 248 4.5E-85 T 22-04-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 Gene3D G3DSA:2.40.10.10 132 235 1.8E-7 T 22-04-2016 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 SUPERFAMILY SSF50494 8 236 3.03E-26 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PRINTS PR00839 V8 serine protease family signature 53 70 3.1E-10 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PRINTS PR00839 V8 serine protease family signature 147 160 3.1E-10 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PRINTS PR00839 V8 serine protease family signature 184 200 3.1E-10 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PRINTS PR00839 V8 serine protease family signature 28 45 3.1E-10 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 Pfam PF13365 Trypsin-like peptidase domain 53 200 7.7E-11 T 22-04-2016 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 Gene3D G3DSA:2.40.10.10 38 131 2.0E-12 T 22-04-2016 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PANTHER PTHR15462 27 202 7.4E-12 T 22-04-2016 AMK58_RS09775 8f7d67fb2ce5006af2145cba7d103d8f 250 PANTHER PTHR15462:SF8 27 202 7.4E-12 T 22-04-2016 AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 254 8.8E-119 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 Gene3D G3DSA:3.20.20.150 1 257 5.1E-94 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 SUPERFAMILY SSF51658 1 256 4.19E-89 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 6.7E-34 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 PIRSF PIRSF006241 1 259 3.3E-95 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 PANTHER PTHR12110:SF3 1 255 1.5E-98 T 22-04-2016 AMK58_RS06975 dad284cec408bd924364b6955d1515b7 265 PANTHER PTHR12110 1 255 1.5E-98 T 22-04-2016 AMK58_RS02915 5393bfd94826c65e9205a48afb33ba65 276 SUPERFAMILY SSF56349 40 258 2.16E-15 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS02915 5393bfd94826c65e9205a48afb33ba65 276 Gene3D G3DSA:1.10.443.10 39 258 2.0E-16 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS06235 813cc400d98186e72edab5bc3c5cfa1a 415 PANTHER PTHR30489 10 415 1.6E-78 T 22-04-2016 AMK58_RS06235 813cc400d98186e72edab5bc3c5cfa1a 415 PANTHER PTHR30489:SF8 10 415 1.6E-78 T 22-04-2016 AMK58_RS06235 813cc400d98186e72edab5bc3c5cfa1a 415 Pfam PF12704 MacB-like periplasmic core domain 30 244 2.7E-20 T 22-04-2016 IPR025857 MacB-like periplasmic core domain AMK58_RS06235 813cc400d98186e72edab5bc3c5cfa1a 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 415 4.1E-150 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMK58_RS06235 813cc400d98186e72edab5bc3c5cfa1a 415 Pfam PF02687 FtsX-like permease family 275 408 4.5E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK58_RS06740 652b09d708148fce9731715681b9b550 172 Gene3D G3DSA:2.160.10.10 9 170 8.1E-46 T 22-04-2016 AMK58_RS06740 652b09d708148fce9731715681b9b550 172 PANTHER PTHR13061 4 171 1.4E-78 T 22-04-2016 AMK58_RS06740 652b09d708148fce9731715681b9b550 172 SUPERFAMILY SSF51161 7 170 1.94E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK58_RS06740 652b09d708148fce9731715681b9b550 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 125 2.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS06740 652b09d708148fce9731715681b9b550 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 7.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK58_RS06740 652b09d708148fce9731715681b9b550 172 PANTHER PTHR13061:SF11 4 171 1.4E-78 T 22-04-2016 AMK58_RS11180 0bad1193d8b79e1ed258885a19d7718a 204 SUPERFAMILY SSF89392 24 187 5.1E-11 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMK58_RS11180 0bad1193d8b79e1ed258885a19d7718a 204 Gene3D G3DSA:2.50.20.10 25 190 2.9E-7 T 22-04-2016 AMK58_RS07140 87689783c57c5610ec6863164a29ab34 156 Pfam PF11736 Protein of unknown function (DUF3299) 68 141 5.0E-5 T 22-04-2016 IPR021727 Protein of unknown function DUF3299 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 Pfam PF01019 Gamma-glutamyltranspeptidase 67 579 2.1E-153 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PANTHER PTHR11686 31 583 2.2E-208 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 53 576 1.2E-122 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 SUPERFAMILY SSF56235 44 583 1.27E-168 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 149 167 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 74 99 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 167 186 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 3.1E-68 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 405 429 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK58_RS12660 ab8ea2a4ecf99f8bbf97fb4cda5b872b 584 PANTHER PTHR11686:SF27 31 583 2.2E-208 T 22-04-2016 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 PANTHER PTHR21152 2 376 6.9E-172 T 22-04-2016 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 PIRSF PIRSF000525 3 380 9.2E-47 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 Gene3D G3DSA:3.40.640.10 20 259 1.3E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 6 379 2.4E-193 T 22-04-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 PANTHER PTHR21152:SF23 2 376 6.9E-172 T 22-04-2016 AMK58_RS09650 6685ca934c98f114964f77a62cad3d6e 386 SUPERFAMILY SSF53383 7 376 4.3E-68 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS00335 41dd81d55d0edd642b89aae257ca33d5 183 Pfam PF04390 Lipopolysaccharide-assembly 28 175 6.7E-12 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 SUPERFAMILY SSF55821 6 170 1.79E-13 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 PANTHER PTHR21327 122 367 1.0E-96 T 22-04-2016 AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 SUPERFAMILY SSF142695 175 346 1.7E-57 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 174 368 38.416 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 Pfam PF00925 GTP cyclohydrolase II 177 344 3.4E-60 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS00290 58a0a77ae3e17b0e792caa4ad64262f7 368 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 193 367 1.7E-65 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 SUPERFAMILY SSF53850 22 312 1.06E-74 T 22-04-2016 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 Gene3D G3DSA:3.40.190.10 111 242 9.0E-37 T 22-04-2016 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 Gene3D G3DSA:3.40.190.10 21 102 1.3E-52 T 22-04-2016 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 Gene3D G3DSA:3.40.190.10 243 312 1.3E-52 T 22-04-2016 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 Pfam PF16868 NMT1-like family 27 310 6.2E-92 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 PANTHER PTHR30024 5 312 1.2E-100 T 22-04-2016 AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 310 7.0E-115 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family AMK58_RS07575 fa40d7a639fa9313aae432d27c11a8bd 312 PANTHER PTHR30024:SF5 5 312 1.2E-100 T 22-04-2016 AMK58_RS13220 c18f8a2c3e0c343eaea9927a14371d7a 270 SUPERFAMILY SSF56219 34 270 6.41E-40 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS13220 c18f8a2c3e0c343eaea9927a14371d7a 270 Gene3D G3DSA:3.60.10.10 42 198 1.9E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS13220 c18f8a2c3e0c343eaea9927a14371d7a 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 45 260 7.0E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK58_RS13220 c18f8a2c3e0c343eaea9927a14371d7a 270 PANTHER PTHR14859 3 270 1.0E-33 T 22-04-2016 IPR027317 PGAP2-interacting protein AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 Gene3D G3DSA:1.10.150.240 17 86 1.1E-29 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 Gene3D G3DSA:3.40.50.1000 87 225 3.1E-45 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 34 182 2.8E-8 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 PANTHER PTHR12725 2 225 1.7E-76 T 22-04-2016 AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 SUPERFAMILY SSF56784 1 225 8.55E-34 T 22-04-2016 IPR023214 HAD-like domain AMK58_RS02215 a2543379f4c051880bb9e6ac48c30697 228 PANTHER PTHR12725:SF59 2 225 1.7E-76 T 22-04-2016 AMK58_RS13385 23cd3eba80b6cb2cb58b01413f168001 51 Pfam PF05717 IS66 Orf2 like protein 9 51 3.7E-16 T 22-04-2016 IPR008878 Transposase IS66, Orf2 AMK58_RS13385 23cd3eba80b6cb2cb58b01413f168001 51 PANTHER PTHR36455:SF1 2 50 7.4E-18 T 22-04-2016 AMK58_RS13385 23cd3eba80b6cb2cb58b01413f168001 51 PANTHER PTHR36455 2 50 7.4E-18 T 22-04-2016 AMK58_RS26525 c990539c7923ef7c5b38caabf272ef49 276 SUPERFAMILY SSF110069 198 276 1.22E-29 T 22-04-2016 IPR007474 ApaG domain AMK58_RS26525 c990539c7923ef7c5b38caabf272ef49 276 Pfam PF04379 Protein of unknown function (DUF525) 213 276 6.9E-24 T 22-04-2016 IPR007474 ApaG domain AMK58_RS26525 c990539c7923ef7c5b38caabf272ef49 276 PANTHER PTHR14289 198 276 3.0E-31 T 22-04-2016 AMK58_RS26525 c990539c7923ef7c5b38caabf272ef49 276 Gene3D G3DSA:2.60.40.1470 196 276 2.9E-30 T 22-04-2016 IPR007474 ApaG domain AMK58_RS07255 a09a1ebfe85c4d36e71d8b06b6b4254b 505 PANTHER PTHR30482 120 476 1.1E-158 T 22-04-2016 AMK58_RS07255 a09a1ebfe85c4d36e71d8b06b6b4254b 505 Pfam PF02653 Branched-chain amino acid transport system / permease component 175 459 2.2E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS07255 a09a1ebfe85c4d36e71d8b06b6b4254b 505 Pfam PF11862 Domain of unknown function (DUF3382) 17 76 1.3E-12 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AMK58_RS07255 a09a1ebfe85c4d36e71d8b06b6b4254b 505 PANTHER PTHR30482:SF9 120 476 1.1E-158 T 22-04-2016 AMK58_RS04395 a7c209ab3d0478ef19e0455899c7a481 120 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 93 1.7E-18 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMK58_RS04395 a7c209ab3d0478ef19e0455899c7a481 120 PIRSF PIRSF032126 1 119 6.7E-25 T 22-04-2016 IPR016989 ATP synthase protein I, alphaproteobacterial AMK58_RS01505 df70606f4d24bb8ab1c5ad0eeb8fac55 345 SUPERFAMILY SSF103481 196 287 1.7E-10 T 22-04-2016 AMK58_RS01505 df70606f4d24bb8ab1c5ad0eeb8fac55 345 SUPERFAMILY SSF103481 60 145 4.18E-14 T 22-04-2016 AMK58_RS01505 df70606f4d24bb8ab1c5ad0eeb8fac55 345 PANTHER PTHR12715 1 281 2.2E-23 T 22-04-2016 AMK58_RS01505 df70606f4d24bb8ab1c5ad0eeb8fac55 345 Pfam PF00892 EamA-like transporter family 4 141 4.5E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS01505 df70606f4d24bb8ab1c5ad0eeb8fac55 345 Pfam PF00892 EamA-like transporter family 152 282 8.4E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS05030 692aa0a4d16aea31cdce8084931361a0 129 Pfam PF06803 Protein of unknown function (DUF1232) 32 68 7.0E-14 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 SMART SM00388 252 341 8.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 Gene3D G3DSA:3.30.565.10 328 499 2.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 341 4.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 SUPERFAMILY SSF47384 236 342 6.08E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 SMART SM00387 387 500 9.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 SUPERFAMILY SSF55874 331 498 5.63E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 499 2.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 453 1.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 1.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 1.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 PANTHER PTHR24423 231 280 7.7E-66 T 22-04-2016 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 PANTHER PTHR24423 305 500 7.7E-66 T 22-04-2016 AMK58_RS01670 c33c1c16f6e9005a596e3ee4f49ec7e6 514 Gene3D G3DSA:1.10.287.130 244 327 4.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS13130 48bf9e69e25e9302668c15e48dca1beb 133 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 131 1.9E-33 T 22-04-2016 IPR014320 Phage shock protein, PspC AMK58_RS13130 48bf9e69e25e9302668c15e48dca1beb 133 PANTHER PTHR33885 13 114 7.5E-15 T 22-04-2016 AMK58_RS13130 48bf9e69e25e9302668c15e48dca1beb 133 Pfam PF04024 PspC domain 14 70 4.3E-17 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal AMK58_RS02710 c434f45e4d2b55ec4f240fbabc077d47 210 Gene3D G3DSA:2.10.109.10 85 207 1.5E-20 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK58_RS02710 c434f45e4d2b55ec4f240fbabc077d47 210 Gene3D G3DSA:1.10.260.40 6 72 2.8E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02710 c434f45e4d2b55ec4f240fbabc077d47 210 SUPERFAMILY SSF47413 5 76 5.2E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK58_RS02710 c434f45e4d2b55ec4f240fbabc077d47 210 Pfam PF00717 Peptidase S24-like 128 195 4.4E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B AMK58_RS02710 c434f45e4d2b55ec4f240fbabc077d47 210 SUPERFAMILY SSF51306 85 207 3.53E-23 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK58_RS07225 17e021d01ba1ca5dbdd25c4e62fe832b 107 SMART SM01259 22 93 3.5E-42 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS07225 17e021d01ba1ca5dbdd25c4e62fe832b 107 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 22 92 4.3E-31 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS07225 17e021d01ba1ca5dbdd25c4e62fe832b 107 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 19 94 2.0E-25 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK58_RS07225 17e021d01ba1ca5dbdd25c4e62fe832b 107 PIRSF PIRSF028440 1 104 1.2E-37 T 22-04-2016 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 PANTHER PTHR30212:SF2 24 227 3.5E-77 T 22-04-2016 AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 SUPERFAMILY SSF50800 4 227 4.24E-75 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 Pfam PF03475 3-alpha domain 174 217 1.1E-15 T 22-04-2016 IPR005163 3-alpha domain AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 Pfam PF03473 MOSC domain 49 164 4.3E-26 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 PANTHER PTHR30212 24 227 3.5E-77 T 22-04-2016 AMK58_RS11445 f5baa5ab9590a2f7f8492d45ff7f4fe1 229 Gene3D G3DSA:2.40.33.20 3 227 6.6E-92 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 Gene3D G3DSA:3.40.50.1980 75 173 9.3E-27 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 2 255 4.1E-62 T 22-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 PANTHER PTHR33712 1 113 2.2E-43 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 PANTHER PTHR33712 132 255 2.2E-43 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 Gene3D G3DSA:1.20.89.10 178 255 7.0E-27 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 PANTHER PTHR33712:SF2 132 255 2.2E-43 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 SUPERFAMILY SSF53807 2 255 4.91E-66 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 Gene3D G3DSA:3.40.50.1980 2 74 9.9E-14 T 22-04-2016 AMK58_RS18370 41d628168146a16490cd5946fb792a58 256 PANTHER PTHR33712:SF2 1 113 2.2E-43 T 22-04-2016 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 SUPERFAMILY SSF53098 119 286 4.8E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 PANTHER PTHR35004 2 377 4.1E-72 T 22-04-2016 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 SUPERFAMILY SSF46689 9 87 7.17E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 Gene3D G3DSA:3.30.420.10 118 285 8.7E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 Pfam PF13551 Winged helix-turn helix 9 57 2.6E-7 T 22-04-2016 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 Pfam PF00665 Integrase core domain 118 251 1.5E-20 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK58_RS13450 a93267ae5df2634ebe5588492e5a8520 427 PANTHER PTHR35004:SF2 2 377 4.1E-72 T 22-04-2016 AMK58_RS02085 bce3ca566ec919256105f59b8b692265 296 PANTHER PTHR10120:SF19 1 286 5.7E-107 T 22-04-2016 AMK58_RS02085 bce3ca566ec919256105f59b8b692265 296 Pfam PF01435 Peptidase family M48 73 284 7.8E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK58_RS02085 bce3ca566ec919256105f59b8b692265 296 Gene3D G3DSA:3.30.2010.10 57 147 9.4E-35 T 22-04-2016 AMK58_RS02085 bce3ca566ec919256105f59b8b692265 296 PANTHER PTHR10120 1 286 5.7E-107 T 22-04-2016 AMK58_RS02085 bce3ca566ec919256105f59b8b692265 296 Hamap MF_00188 Protease HtpX [htpX]. 4 284 28.917 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AMK58_RS05145 00d8a8b3753768bd25587aa5d6116ed3 195 SUPERFAMILY SSF55729 1 154 5.8E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05145 00d8a8b3753768bd25587aa5d6116ed3 195 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 3.0E-32 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS05145 00d8a8b3753768bd25587aa5d6116ed3 195 PANTHER PTHR13256 7 185 1.6E-48 T 22-04-2016 AMK58_RS05145 00d8a8b3753768bd25587aa5d6116ed3 195 Gene3D G3DSA:3.40.630.30 2 185 8.6E-50 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05145 00d8a8b3753768bd25587aa5d6116ed3 195 PANTHER PTHR13256:SF19 7 185 1.6E-48 T 22-04-2016 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 Pfam PF00156 Phosphoribosyl transferase domain 269 385 3.9E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 Pfam PF13522 Glutamine amidotransferase domain 82 209 2.1E-19 T 22-04-2016 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 PANTHER PTHR11907:SF0 13 475 4.4E-227 T 22-04-2016 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 SUPERFAMILY SSF53271 250 469 9.01E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 Gene3D G3DSA:3.40.50.2020 271 438 2.3E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 15 463 46.9 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 PANTHER PTHR11907 13 475 4.4E-227 T 22-04-2016 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 Gene3D G3DSA:3.60.20.10 16 258 1.0E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 SUPERFAMILY SSF56235 16 257 1.29E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 16 462 3.2E-158 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK58_RS07325 93ab457a0cd218f226d335104c46e6d6 482 PIRSF PIRSF000485 12 477 1.9E-170 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK58_RS02170 12c673b432a586636b3daa43c1474af3 225 PANTHER PTHR33254:SF5 1 211 4.0E-43 T 22-04-2016 AMK58_RS02170 12c673b432a586636b3daa43c1474af3 225 PANTHER PTHR33254 1 211 4.0E-43 T 22-04-2016 AMK58_RS02170 12c673b432a586636b3daa43c1474af3 225 SUPERFAMILY SSF89562 24 185 4.58E-42 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMK58_RS02170 12c673b432a586636b3daa43c1474af3 225 Pfam PF03737 Demethylmenaquinone methyltransferase 30 174 1.1E-35 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMK58_RS02170 12c673b432a586636b3daa43c1474af3 225 Gene3D G3DSA:3.50.30.40 28 183 2.3E-43 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMK58_RS09275 6a22e8f99a6f36481c65439d2a80fca1 160 Pfam PF02472 Biopolymer transport protein ExbD/TolR 21 141 7.6E-28 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMK58_RS09275 6a22e8f99a6f36481c65439d2a80fca1 160 PANTHER PTHR30558 4 150 9.8E-36 T 22-04-2016 AMK58_RS09275 6a22e8f99a6f36481c65439d2a80fca1 160 TIGRFAM TIGR02801 tolR: protein TolR 22 142 1.3E-37 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AMK58_RS09275 6a22e8f99a6f36481c65439d2a80fca1 160 PANTHER PTHR30558:SF7 4 150 9.8E-36 T 22-04-2016 AMK58_RS00075 7ab83a2ab22c1ed59bdb2dd4b8fd37b7 199 SMART SM00014 77 188 3.6E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS00075 7ab83a2ab22c1ed59bdb2dd4b8fd37b7 199 Gene3D G3DSA:1.20.144.10 58 190 5.0E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS00075 7ab83a2ab22c1ed59bdb2dd4b8fd37b7 199 SUPERFAMILY SSF48317 54 193 3.01E-20 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS00075 7ab83a2ab22c1ed59bdb2dd4b8fd37b7 199 Pfam PF01569 PAP2 superfamily 82 190 1.2E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK58_RS00840 189089e3375bc14a9814019553b57cfe 190 Pfam PF05685 Putative restriction endonuclease 13 159 5.1E-23 T 22-04-2016 IPR008538 Domain of unknown function DUF820 AMK58_RS00840 189089e3375bc14a9814019553b57cfe 190 PANTHER PTHR36558:SF1 3 190 7.7E-33 T 22-04-2016 AMK58_RS00840 189089e3375bc14a9814019553b57cfe 190 Gene3D G3DSA:3.90.1570.10 3 157 8.6E-24 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 AMK58_RS00840 189089e3375bc14a9814019553b57cfe 190 SUPERFAMILY SSF52980 7 158 1.02E-22 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK58_RS00840 189089e3375bc14a9814019553b57cfe 190 PANTHER PTHR36558 3 190 7.7E-33 T 22-04-2016 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 PANTHER PTHR33164 7 146 1.4E-35 T 22-04-2016 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 PANTHER PTHR33164:SF8 7 146 1.4E-35 T 22-04-2016 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 Pfam PF01047 MarR family 42 99 6.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 SMART SM00347 35 135 5.9E-21 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 1.2E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 SUPERFAMILY SSF46785 7 145 6.23E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS10530 e835ef6ccbdbf19215fa7a0573f3508d 146 Gene3D G3DSA:1.10.10.10 6 145 1.7E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13315 82a4998bcae962074195fb064f638edb 155 PIRSF PIRSF029477 8 155 1.3E-33 T 22-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 AMK58_RS13315 82a4998bcae962074195fb064f638edb 155 Pfam PF09537 Domain of unknown function (DUF2383) 14 122 2.7E-29 T 22-04-2016 IPR019052 Domain of unknown function DUF2383 AMK58_RS13315 82a4998bcae962074195fb064f638edb 155 SUPERFAMILY SSF47240 8 122 2.71E-6 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS13315 82a4998bcae962074195fb064f638edb 155 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 14 151 2.7E-33 T 22-04-2016 IPR011971 Conserved hypothetical protein CHP02284 AMK58_RS13315 82a4998bcae962074195fb064f638edb 155 Gene3D G3DSA:1.20.1260.10 7 123 2.6E-7 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 Pfam PF12796 Ankyrin repeats (3 copies) 37 124 2.0E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 SUPERFAMILY SSF48403 35 186 2.19E-39 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 SMART SM00248 95 124 2.8E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 SMART SM00248 62 91 0.0015 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 SMART SM00248 128 157 0.0087 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 PANTHER PTHR24198 37 187 7.5E-41 T 22-04-2016 AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 Pfam PF13606 Ankyrin repeat 129 153 6.7E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 Gene3D G3DSA:1.25.40.20 107 186 1.6E-24 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS12860 fba2d9d81d7a544402e6c51b6bb11abb 187 Gene3D G3DSA:1.25.40.20 36 106 2.9E-22 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK58_RS04105 4f1c34118d2b64c33c0ea00843d91ee8 124 PANTHER PTHR33931:SF2 1 111 2.3E-30 T 22-04-2016 AMK58_RS04105 4f1c34118d2b64c33c0ea00843d91ee8 124 Pfam PF03788 LrgA family 12 105 9.4E-30 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 AMK58_RS04105 4f1c34118d2b64c33c0ea00843d91ee8 124 PANTHER PTHR33931 1 111 2.3E-30 T 22-04-2016 AMK58_RS03685 8367b62ebb168105c8570e8bd02d48f7 177 Pfam PF05981 CreA protein 38 164 1.7E-43 T 22-04-2016 IPR010292 Uncharacterised protein family CreA AMK58_RS03685 8367b62ebb168105c8570e8bd02d48f7 177 PANTHER PTHR37952 1 167 1.6E-35 T 22-04-2016 AMK58_RS03685 8367b62ebb168105c8570e8bd02d48f7 177 PANTHER PTHR37952:SF2 1 167 1.6E-35 T 22-04-2016 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 Gene3D G3DSA:3.40.50.1820 20 307 4.0E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 Pfam PF12697 Alpha/beta hydrolase family 59 303 1.6E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 PANTHER PTHR10992 36 310 1.2E-39 T 22-04-2016 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 SUPERFAMILY SSF53474 30 307 4.5E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 4.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 4.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 PRINTS PR00111 Alpha/beta hydrolase fold signature 254 268 4.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS09005 b3eecf678ed4a0510f6794718432b295 321 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 4.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK58_RS13650 fbea0bbd6fce459cbdb96d72eeaa402c 303 Pfam PF05621 Bacterial TniB protein 22 278 3.3E-72 T 22-04-2016 IPR008868 Bacterial TniB AMK58_RS13650 fbea0bbd6fce459cbdb96d72eeaa402c 303 SUPERFAMILY SSF52540 43 279 1.3E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13650 fbea0bbd6fce459cbdb96d72eeaa402c 303 Gene3D G3DSA:3.40.50.300 47 204 5.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12460 d4481e73978fece3cbe6f96e7cd8c981 422 Pfam PF00999 Sodium/hydrogen exchanger family 17 406 2.0E-49 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK58_RS12460 d4481e73978fece3cbe6f96e7cd8c981 422 PANTHER PTHR32468 36 407 1.1E-92 T 22-04-2016 AMK58_RS13735 99566d17654fbc42a275c0397b85e65d 841 PANTHER PTHR30287 2 841 2.4E-114 T 22-04-2016 AMK58_RS13735 99566d17654fbc42a275c0397b85e65d 841 Pfam PF02687 FtsX-like permease family 722 830 2.3E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK58_RS13735 99566d17654fbc42a275c0397b85e65d 841 Pfam PF02687 FtsX-like permease family 265 380 3.9E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK58_RS13340 3607476a0fefdbb4bdb58f0b23c64d64 281 Gene3D G3DSA:1.10.3720.10 66 273 6.5E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13340 3607476a0fefdbb4bdb58f0b23c64d64 281 PANTHER PTHR30465:SF10 1 277 2.2E-83 T 22-04-2016 AMK58_RS13340 3607476a0fefdbb4bdb58f0b23c64d64 281 PANTHER PTHR30465 1 277 2.2E-83 T 22-04-2016 AMK58_RS13340 3607476a0fefdbb4bdb58f0b23c64d64 281 SUPERFAMILY SSF161098 70 257 3.14E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS13340 3607476a0fefdbb4bdb58f0b23c64d64 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 2.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12715 4e5346b73ab52d9dad8064ef6b5b1914 371 Pfam PF00535 Glycosyl transferase family 2 12 174 4.1E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS12715 4e5346b73ab52d9dad8064ef6b5b1914 371 PANTHER PTHR10859:SF86 9 340 2.2E-133 T 22-04-2016 AMK58_RS12715 4e5346b73ab52d9dad8064ef6b5b1914 371 SUPERFAMILY SSF53448 11 273 1.85E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS12715 4e5346b73ab52d9dad8064ef6b5b1914 371 Gene3D G3DSA:3.90.550.10 8 139 8.1E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS12715 4e5346b73ab52d9dad8064ef6b5b1914 371 PANTHER PTHR10859 9 340 2.2E-133 T 22-04-2016 AMK58_RS02255 a29b4c498675e25ae4210ebb7a2ab33d 445 Pfam PF13416 Bacterial extracellular solute-binding protein 49 357 8.1E-33 T 22-04-2016 AMK58_RS02255 a29b4c498675e25ae4210ebb7a2ab33d 445 PANTHER PTHR30061:SF7 1 444 8.3E-128 T 22-04-2016 AMK58_RS02255 a29b4c498675e25ae4210ebb7a2ab33d 445 SUPERFAMILY SSF53850 32 432 9.24E-72 T 22-04-2016 AMK58_RS02255 a29b4c498675e25ae4210ebb7a2ab33d 445 Gene3D G3DSA:3.40.190.10 153 352 2.6E-35 T 22-04-2016 AMK58_RS02255 a29b4c498675e25ae4210ebb7a2ab33d 445 PANTHER PTHR30061 1 444 8.3E-128 T 22-04-2016 AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 Pfam PF13279 Thioesterase-like superfamily 13 126 5.1E-12 T 22-04-2016 AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 PIRSF PIRSF003230 1 133 2.8E-20 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 PANTHER PTHR31793 5 135 1.8E-32 T 22-04-2016 AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 Gene3D G3DSA:3.10.129.10 4 127 1.0E-34 T 22-04-2016 IPR029069 HotDog domain AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 PANTHER PTHR31793:SF9 5 135 1.8E-32 T 22-04-2016 AMK58_RS11185 8e63f3142191bb6913a1b02708b9563f 135 SUPERFAMILY SSF54637 5 133 4.43E-32 T 22-04-2016 IPR029069 HotDog domain AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 Gene3D G3DSA:3.30.930.10 3 242 1.2E-114 T 22-04-2016 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PANTHER PTHR11777 1 888 0.0 T 22-04-2016 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 SUPERFAMILY SSF50447 453 553 9.27E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 SUPERFAMILY SSF55186 553 721 6.8E-47 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 SMART SM00863 654 705 1.1E-20 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PANTHER PTHR11777:SF9 1 888 0.0 T 22-04-2016 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 Pfam PF01411 tRNA synthetases class II (A) 6 557 1.0E-220 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.3E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.3E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.3E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.3E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.3E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 SUPERFAMILY SSF55681 3 245 2.46E-109 T 22-04-2016 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 705 4.4E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 866 2.8E-295 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 SUPERFAMILY SSF101353 246 461 4.18E-59 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 887 198.364 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMK58_RS10035 1247e0dde8509d59bc63059f09f27f5c 889 Pfam PF02272 DHHA1 domain 811 880 1.5E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 Pfam PF00460 Flagella basal body rod protein 7 37 6.3E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 366 454 5.8E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 SUPERFAMILY SSF117143 81 390 5.62E-36 T 22-04-2016 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 436 3.9E-51 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 PANTHER PTHR30435:SF1 1 139 1.2E-42 T 22-04-2016 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 PANTHER PTHR30435:SF1 322 455 1.2E-42 T 22-04-2016 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 PANTHER PTHR30435 1 139 1.2E-42 T 22-04-2016 AMK58_RS05160 c1889329f312545e59fa26016bc626c8 456 PANTHER PTHR30435 322 455 1.2E-42 T 22-04-2016 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 PANTHER PTHR14413:SF5 1 129 7.6E-62 T 22-04-2016 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 SUPERFAMILY SSF64263 1 119 1.96E-48 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 PANTHER PTHR14413 1 129 7.6E-62 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.086 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.9E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS05820 3d2e5be089a1e4c50aee7938a5f72bdc 140 Pfam PF01196 Ribosomal protein L17 20 116 1.9E-33 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12740 9c091e0bd2d4987cc70dcd285641c12e 137 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 22 128 7.4E-28 T 22-04-2016 IPR018673 Protein of unknown function DUF2141 AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 PANTHER PTHR35923 13 358 7.8E-61 T 22-04-2016 AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 16 336 6.0E-57 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 SUPERFAMILY SSF51445 5 360 3.27E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 Gene3D G3DSA:3.20.20.80 4 361 3.0E-100 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 158 167 - T 22-04-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMK58_RS09500 b7ce0c9ed4c42e209f68ef3a062569fe 442 PANTHER PTHR35923:SF2 13 358 7.8E-61 T 22-04-2016 AMK58_RS12045 c013da9fb97b5b9ef586e08ccc14380b 218 PANTHER PTHR21392 1 189 2.3E-32 T 22-04-2016 AMK58_RS12045 c013da9fb97b5b9ef586e08ccc14380b 218 SMART SM01144 1 196 2.1E-32 T 22-04-2016 IPR005636 DTW AMK58_RS12045 c013da9fb97b5b9ef586e08ccc14380b 218 Pfam PF03942 DTW domain 2 190 1.2E-31 T 22-04-2016 IPR005636 DTW AMK58_RS01285 304ba1e6e5556062be8f4336f8008672 319 Pfam PF08239 Bacterial SH3 domain 54 103 2.0E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK58_RS04100 3fdd68ae1487951b2af1a2a061c8ad31 240 PANTHER PTHR30249 1 238 8.1E-93 T 22-04-2016 AMK58_RS04100 3fdd68ae1487951b2af1a2a061c8ad31 240 Pfam PF04172 LrgB-like family 23 236 8.8E-82 T 22-04-2016 IPR007300 CidB/LrgB family AMK58_RS04100 3fdd68ae1487951b2af1a2a061c8ad31 240 PANTHER PTHR30249:SF5 1 238 8.1E-93 T 22-04-2016 AMK58_RS08435 1c06a494148b733382b9fb4f1ba5dcef 157 SUPERFAMILY SSF82784 5 151 1.7E-45 T 22-04-2016 IPR003718 OsmC/Ohr family AMK58_RS08435 1c06a494148b733382b9fb4f1ba5dcef 157 Gene3D G3DSA:3.30.300.20 4 153 9.1E-63 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK58_RS08435 1c06a494148b733382b9fb4f1ba5dcef 157 Pfam PF02566 OsmC-like protein 52 151 3.4E-15 T 22-04-2016 IPR003718 OsmC/Ohr family AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 PANTHER PTHR10173:SF18 29 146 1.2E-45 T 22-04-2016 AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 PANTHER PTHR10173 29 146 1.2E-45 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 SUPERFAMILY SSF51316 25 152 6.28E-52 T 22-04-2016 IPR011057 Mss4-like AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 26 146 1.0E-43 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 Gene3D G3DSA:2.170.150.20 20 149 7.1E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK58_RS12975 d6ec3189db5103a03128c7f3b2905e12 164 Pfam PF01641 SelR domain 29 144 3.1E-45 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK58_RS06525 8eb346ebc276119b1115c925ee19aa3c 176 PANTHER PTHR10430 2 153 4.9E-66 T 22-04-2016 AMK58_RS06525 8eb346ebc276119b1115c925ee19aa3c 176 PANTHER PTHR10430:SF19 2 153 4.9E-66 T 22-04-2016 AMK58_RS06525 8eb346ebc276119b1115c925ee19aa3c 176 Gene3D G3DSA:3.40.30.10 2 174 1.1E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06525 8eb346ebc276119b1115c925ee19aa3c 176 SUPERFAMILY SSF52833 2 175 8.67E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06525 8eb346ebc276119b1115c925ee19aa3c 176 Pfam PF08534 Redoxin 29 151 3.9E-28 T 22-04-2016 IPR013740 Redoxin GO:0016491 AMK58_RS26120 ef69047c659965ff2e0fe52a3f116d1f 165 Pfam PF11849 Domain of unknown function (DUF3369) 1 128 9.4E-36 T 22-04-2016 IPR021800 Domain of unknown function DUF3369 AMK58_RS12555 81c82b9fc24dbb02c9bdbf9f44b4086d 194 SMART SM00271 135 193 5.6E-11 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS12555 81c82b9fc24dbb02c9bdbf9f44b4086d 194 SUPERFAMILY SSF46565 99 189 2.49E-16 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS12555 81c82b9fc24dbb02c9bdbf9f44b4086d 194 Pfam PF00226 DnaJ domain 140 189 5.4E-12 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS12555 81c82b9fc24dbb02c9bdbf9f44b4086d 194 Gene3D G3DSA:1.10.287.110 130 190 2.4E-13 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 PANTHER PTHR22777 45 303 7.2E-84 T 22-04-2016 AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 SMART SM00116 149 197 4.2 T 22-04-2016 IPR000644 CBS domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 SMART SM00116 87 136 1.7 T 22-04-2016 IPR000644 CBS domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 Pfam PF00571 CBS domain 148 197 8.5E-7 T 22-04-2016 IPR000644 CBS domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 Pfam PF00571 CBS domain 79 136 1.0E-5 T 22-04-2016 IPR000644 CBS domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 SUPERFAMILY SSF54631 73 210 5.31E-32 T 22-04-2016 AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 SMART SM01091 213 295 5.5E-24 T 22-04-2016 IPR005170 Transporter-associated domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 Pfam PF03471 Transporter associated domain 214 293 1.3E-18 T 22-04-2016 IPR005170 Transporter-associated domain AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 Gene3D G3DSA:3.10.580.10 65 204 3.1E-19 T 22-04-2016 AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 Gene3D G3DSA:3.30.465.10 205 293 1.0E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS00715 bee67cfb9ba2fef2893b3b982d3c8a70 305 SUPERFAMILY SSF56176 211 297 4.36E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 Pfam PF00571 CBS domain 79 128 2.4E-12 T 22-04-2016 IPR000644 CBS domain AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 Pfam PF00571 CBS domain 4 65 6.8E-10 T 22-04-2016 IPR000644 CBS domain AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 PANTHER PTHR11911 1 127 4.1E-28 T 22-04-2016 AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 SMART SM00116 83 130 1.3E-9 T 22-04-2016 IPR000644 CBS domain AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 SMART SM00116 13 65 3.1E-8 T 22-04-2016 IPR000644 CBS domain AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 Gene3D G3DSA:3.10.580.10 1 128 1.4E-30 T 22-04-2016 AMK58_RS07010 6741b905d9425f1c4fce953aaf9d303c 149 SUPERFAMILY SSF54631 1 130 4.55E-30 T 22-04-2016 AMK58_RS07220 d5dd79cf4d8016d05cd0eb558366cf28 252 SUPERFAMILY SSF53448 11 238 5.5E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS07220 d5dd79cf4d8016d05cd0eb558366cf28 252 PANTHER PTHR10859 2 241 1.2E-74 T 22-04-2016 AMK58_RS07220 d5dd79cf4d8016d05cd0eb558366cf28 252 PANTHER PTHR10859:SF49 2 241 1.2E-74 T 22-04-2016 AMK58_RS07220 d5dd79cf4d8016d05cd0eb558366cf28 252 Pfam PF00535 Glycosyl transferase family 2 14 179 1.1E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS07220 d5dd79cf4d8016d05cd0eb558366cf28 252 Gene3D G3DSA:3.90.550.10 12 219 5.6E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS13565 bc1d4aa50c8a3a893b89dff731453634 79 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 78 2.9E-23 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family AMK58_RS13565 bc1d4aa50c8a3a893b89dff731453634 79 PANTHER PTHR30007 16 78 2.6E-25 T 22-04-2016 AMK58_RS13565 bc1d4aa50c8a3a893b89dff731453634 79 PANTHER PTHR30007:SF0 16 78 2.6E-25 T 22-04-2016 AMK58_RS10865 0f08116863a474cc559ad5807c5153ba 130 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 24 129 1.9E-25 T 22-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMK58_RS10865 0f08116863a474cc559ad5807c5153ba 130 PANTHER PTHR12910 3 129 1.9E-23 T 22-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 SMART SM00479 2 166 2.7E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 Gene3D G3DSA:3.30.420.10 1 162 1.6E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 SUPERFAMILY SSF53098 3 162 2.88E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 PANTHER PTHR30231 1 180 1.2E-51 T 22-04-2016 AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 Pfam PF00929 Exonuclease 4 153 2.5E-19 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK58_RS12775 b919183e9775ff36c6800c2d7aa99658 206 PANTHER PTHR30231:SF10 1 180 1.2E-51 T 22-04-2016 AMK58_RS06390 f93464f7c1fc03c9cc0892f720cd44a4 159 Pfam PF00583 Acetyltransferase (GNAT) family 61 137 8.6E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS06390 f93464f7c1fc03c9cc0892f720cd44a4 159 Gene3D G3DSA:3.40.630.30 40 159 9.1E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06390 f93464f7c1fc03c9cc0892f720cd44a4 159 SUPERFAMILY SSF55729 21 159 2.62E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06390 f93464f7c1fc03c9cc0892f720cd44a4 159 PANTHER PTHR13947 56 157 4.4E-21 T 22-04-2016 AMK58_RS08040 8d5392fd7e95611d7a8adcaa70d34b77 214 Pfam PF09976 Tetratricopeptide repeat-like domain 21 197 4.1E-7 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain AMK58_RS00515 3ee7d44d280e5bd98dc8a606b3c13ee5 522 SUPERFAMILY SSF50494 356 488 6.33E-6 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK58_RS10235 6052cb9a06db31388bf3db5269ffffd6 508 Gene3D G3DSA:3.40.50.150 18 157 8.6E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10235 6052cb9a06db31388bf3db5269ffffd6 508 Pfam PF13649 Methyltransferase domain 50 146 7.9E-10 T 22-04-2016 AMK58_RS10235 6052cb9a06db31388bf3db5269ffffd6 508 SUPERFAMILY SSF53335 47 178 2.11E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10235 6052cb9a06db31388bf3db5269ffffd6 508 Pfam PF10119 Predicted methyltransferase regulatory domain 219 301 2.9E-30 T 22-04-2016 IPR018773 Methyltransferase regulatory domain, predicted AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 24 214 6.7E-79 T 22-04-2016 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 SUPERFAMILY SSF52518 22 215 1.92E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 PANTHER PTHR18968:SF40 16 261 2.8E-96 T 22-04-2016 AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 Gene3D G3DSA:3.40.50.970 23 215 4.1E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 PANTHER PTHR18968 16 261 2.8E-96 T 22-04-2016 AMK58_RS13300 8f555da4d7b08cddded28e2d60ecc4c1 280 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 58 206 7.3E-32 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 SUPERFAMILY SSF51430 1 311 9.17E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 Gene3D G3DSA:3.20.20.100 1 311 9.6E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 PANTHER PTHR11732 1 334 6.5E-170 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 PRINTS PR00069 Aldo-keto reductase signature 103 121 4.5E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.5E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 PRINTS PR00069 Aldo-keto reductase signature 134 151 4.5E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 Pfam PF00248 Aldo/keto reductase family 15 310 8.9E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK58_RS11125 b89c3eadb8d781abaf6661f821d3c6dc 341 PANTHER PTHR11732:SF273 1 334 6.5E-170 T 22-04-2016 AMK58_RS04690 ca286d025e653890f2a978c3fca10112 255 PANTHER PTHR11907 1 255 4.4E-116 T 22-04-2016 AMK58_RS04690 ca286d025e653890f2a978c3fca10112 255 SUPERFAMILY SSF56235 2 251 3.86E-46 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS04690 ca286d025e653890f2a978c3fca10112 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 4.7E-114 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 AMK58_RS04690 ca286d025e653890f2a978c3fca10112 255 Gene3D G3DSA:3.60.20.10 1 252 4.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK58_RS04690 ca286d025e653890f2a978c3fca10112 255 PANTHER PTHR11907:SF10 1 255 4.4E-116 T 22-04-2016 AMK58_RS17180 9eac9079d330e957f0573e81ef6b3754 126 PRINTS PR01837 MgtC/SapB protein signature 40 64 2.5E-22 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS17180 9eac9079d330e957f0573e81ef6b3754 126 PRINTS PR01837 MgtC/SapB protein signature 13 35 2.5E-22 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS17180 9eac9079d330e957f0573e81ef6b3754 126 Pfam PF02308 MgtC family 15 86 2.7E-19 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS17180 9eac9079d330e957f0573e81ef6b3754 126 PANTHER PTHR33778 11 88 2.8E-27 T 22-04-2016 AMK58_RS09080 b2350ebf090c19aa5aa8890bcd516d2b 413 PANTHER PTHR10283 9 395 9.5E-63 T 22-04-2016 AMK58_RS09080 b2350ebf090c19aa5aa8890bcd516d2b 413 Pfam PF03600 Citrate transporter 30 336 3.5E-24 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AMK58_RS09080 b2350ebf090c19aa5aa8890bcd516d2b 413 PANTHER PTHR10283:SF95 9 395 9.5E-63 T 22-04-2016 AMK58_RS06880 6245c70f976e2b4d8de592dce9932ebe 160 SUPERFAMILY SSF55729 28 146 1.73E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06880 6245c70f976e2b4d8de592dce9932ebe 160 PANTHER PTHR10545 1 148 3.0E-17 T 22-04-2016 AMK58_RS06880 6245c70f976e2b4d8de592dce9932ebe 160 PANTHER PTHR10545:SF33 1 148 3.0E-17 T 22-04-2016 AMK58_RS06880 6245c70f976e2b4d8de592dce9932ebe 160 Gene3D G3DSA:3.40.630.30 20 154 4.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06880 6245c70f976e2b4d8de592dce9932ebe 160 Pfam PF00583 Acetyltransferase (GNAT) family 70 145 6.6E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 PANTHER PTHR30294:SF21 17 275 9.3E-39 T 22-04-2016 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 Pfam PF01061 ABC-2 type transporter 42 233 1.1E-9 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 8.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 8.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 152 176 8.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK58_RS12335 1ab5862fb7ccf6805ceea1c37acc0921 278 PANTHER PTHR30294 17 275 9.3E-39 T 22-04-2016 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 PANTHER PTHR12715 1 285 1.8E-73 T 22-04-2016 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 PANTHER PTHR12715:SF12 1 285 1.8E-73 T 22-04-2016 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 SUPERFAMILY SSF103481 30 133 2.35E-15 T 22-04-2016 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 Pfam PF00892 EamA-like transporter family 146 279 6.1E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 Pfam PF00892 EamA-like transporter family 2 129 1.9E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS12925 6a4d461548e179f62b6d7bf6dec70191 285 SUPERFAMILY SSF103481 180 282 1.44E-14 T 22-04-2016 AMK58_RS12840 dbbcf798aefa6b63b38215e96c6664ac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS12840 dbbcf798aefa6b63b38215e96c6664ac 88 PANTHER PTHR34040 3 84 3.4E-12 T 22-04-2016 AMK58_RS12840 dbbcf798aefa6b63b38215e96c6664ac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-10 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS12840 dbbcf798aefa6b63b38215e96c6664ac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-10 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS12840 dbbcf798aefa6b63b38215e96c6664ac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-10 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 3.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 3.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 3.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 3.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 PANTHER PTHR33164 4 166 9.8E-27 T 22-04-2016 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 Pfam PF12802 MarR family 48 105 4.2E-13 T 22-04-2016 AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 SUPERFAMILY SSF46785 16 158 9.81E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 Gene3D G3DSA:1.10.10.10 11 156 4.8E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS13020 00c50073846a3b40c19a9819821682db 175 SMART SM00347 42 142 7.1E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 PANTHER PTHR13822:SF7 1 131 6.1E-30 T 22-04-2016 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 80 5.0E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 PANTHER PTHR13822 1 131 6.1E-30 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 1.7E-32 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 Gene3D G3DSA:2.60.15.10 1 89 1.4E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 SUPERFAMILY SSF51344 5 85 1.31E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 5.3E-26 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11760 5942315f9c5c7f7948463f4830d5ff73 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.642 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 SUPERFAMILY SSF46689 16 92 9.48E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 Gene3D G3DSA:1.10.10.60 16 67 2.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 6.4E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 SUPERFAMILY SSF48498 94 215 5.13E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 PANTHER PTHR30055 9 221 9.5E-20 T 22-04-2016 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.7E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.7E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK58_RS11235 a196ec6aff5fc36531cc7185070328d8 222 Gene3D G3DSA:1.10.357.10 68 216 2.3E-18 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 Pfam PF00410 Ribosomal protein S8 5 132 2.1E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 SUPERFAMILY SSF56047 3 132 1.31E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 31.213 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 Gene3D G3DSA:3.30.1490.10 76 132 5.5E-28 T 22-04-2016 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 PANTHER PTHR11758 1 132 1.5E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK58_RS10335 6d2094ed5d9051bc028f33abf78cece1 132 Gene3D G3DSA:3.30.1370.30 3 73 4.5E-22 T 22-04-2016 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 Pfam PF13458 Periplasmic binding protein 25 361 1.6E-56 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 Gene3D G3DSA:3.40.50.2300 24 223 8.4E-64 T 22-04-2016 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PANTHER PTHR30483 1 365 8.9E-112 T 22-04-2016 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PANTHER PTHR30483:SF20 1 365 8.9E-112 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 5.3E-24 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 87 97 5.3E-24 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 5.3E-24 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 5.3E-24 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 5.3E-24 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS07275 ec7267955d8e56b24f6a4fecfd286bab 366 SUPERFAMILY SSF53822 24 365 8.35E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS12175 524c85a4a6a618ea3821a89901dec10d 491 Pfam PF02646 RmuC family 159 446 1.8E-92 T 22-04-2016 IPR003798 DNA recombination RmuC AMK58_RS12175 524c85a4a6a618ea3821a89901dec10d 491 PANTHER PTHR30563 27 484 2.8E-64 T 22-04-2016 AMK58_RS12665 1f3473eca61df84b99adc6def56cab9e 130 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 128 1.5E-22 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMK58_RS12665 1f3473eca61df84b99adc6def56cab9e 130 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 107 8.7E-25 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMK58_RS12565 adb6fb66ad0ce670a192651dacd5355d 126 Pfam PF13366 PD-(D/E)XK nuclease superfamily 11 116 3.4E-37 T 22-04-2016 IPR026350 GxxExxY protein AMK58_RS12565 adb6fb66ad0ce670a192651dacd5355d 126 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 12 124 4.6E-39 T 22-04-2016 IPR026350 GxxExxY protein AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 Gene3D G3DSA:3.10.129.10 17 139 7.6E-40 T 22-04-2016 IPR029069 HotDog domain AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 PANTHER PTHR12418 1 149 1.2E-35 T 22-04-2016 AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 SUPERFAMILY SSF54637 6 137 3.2E-27 T 22-04-2016 IPR029069 HotDog domain AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 135 3.7E-11 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 PANTHER PTHR12418:SF30 1 149 1.2E-35 T 22-04-2016 AMK58_RS06720 a2ff65becefde8f55cc26cdfbac234e3 156 Pfam PF03061 Thioesterase superfamily 51 125 8.4E-10 T 22-04-2016 IPR006683 Thioesterase domain AMK58_RS06340 d861061c21bc590e354763d4cbb8626a 175 PANTHER PTHR23091:SF252 21 175 6.1E-14 T 22-04-2016 AMK58_RS06340 d861061c21bc590e354763d4cbb8626a 175 PANTHER PTHR23091 21 175 6.1E-14 T 22-04-2016 AMK58_RS06340 d861061c21bc590e354763d4cbb8626a 175 Pfam PF00583 Acetyltransferase (GNAT) family 72 149 1.3E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS06340 d861061c21bc590e354763d4cbb8626a 175 Gene3D G3DSA:3.40.630.30 24 175 7.4E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS06340 d861061c21bc590e354763d4cbb8626a 175 SUPERFAMILY SSF55729 22 175 1.28E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 PANTHER PTHR30341:SF1 14 292 3.4E-82 T 22-04-2016 AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 SUPERFAMILY SSF52096 164 226 6.47E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 SUPERFAMILY SSF52096 20 135 6.47E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 PANTHER PTHR30341 14 292 3.4E-82 T 22-04-2016 AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 Pfam PF01343 Peptidase family S49 89 230 3.9E-25 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 Gene3D G3DSA:3.90.226.10 200 230 1.8E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS04070 46f645c7a4b8aaa3bef9b59dd6a10ff7 292 Gene3D G3DSA:3.90.226.10 22 131 1.8E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS04875 7c64d22e54ed279b7ae3fb31300ab303 160 Pfam PF00578 AhpC/TSA family 12 139 2.5E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK58_RS04875 7c64d22e54ed279b7ae3fb31300ab303 160 Gene3D G3DSA:3.40.30.10 5 160 2.6E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS04875 7c64d22e54ed279b7ae3fb31300ab303 160 SUPERFAMILY SSF52833 9 160 4.05E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS04875 7c64d22e54ed279b7ae3fb31300ab303 160 PIRSF PIRSF000239 4 160 3.8E-26 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMK58_RS04875 7c64d22e54ed279b7ae3fb31300ab303 160 PANTHER PTHR10681 7 160 4.6E-54 T 22-04-2016 AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 Gene3D G3DSA:3.40.50.1820 3 211 3.5E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 SUPERFAMILY SSF53474 4 211 1.25E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 Pfam PF12146 Serine aminopeptidase, S33 47 133 4.5E-9 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 Pfam PF00326 Prolyl oligopeptidase family 147 212 2.4E-5 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 PANTHER PTHR12277 3 214 1.4E-50 T 22-04-2016 AMK58_RS04900 bf0c02888ed70693dcdf7c84d856bf8f 220 PANTHER PTHR12277:SF79 3 214 1.4E-50 T 22-04-2016 AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 SUPERFAMILY SSF52540 6 246 1.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 Pfam PF00005 ABC transporter 28 184 6.5E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 PANTHER PTHR24220:SF586 8 275 4.1E-114 T 22-04-2016 AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 Gene3D G3DSA:3.40.50.300 5 256 1.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 SMART SM00382 34 233 6.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS13030 80133c7208d42a65ecd639386528c7e0 278 PANTHER PTHR24220 8 275 4.1E-114 T 22-04-2016 AMK58_RS05275 5f25bf941cb2e6fcdf9546668ad74f0c 448 Gene3D G3DSA:3.90.1200.10 237 306 1.5E-5 T 22-04-2016 AMK58_RS05275 5f25bf941cb2e6fcdf9546668ad74f0c 448 SUPERFAMILY SSF56112 186 302 2.53E-20 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS05275 5f25bf941cb2e6fcdf9546668ad74f0c 448 SUPERFAMILY SSF56112 87 149 2.53E-20 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS05275 5f25bf941cb2e6fcdf9546668ad74f0c 448 Pfam PF03109 ABC1 family 104 218 1.3E-26 T 22-04-2016 IPR004147 UbiB domain AMK58_RS05275 5f25bf941cb2e6fcdf9546668ad74f0c 448 PANTHER PTHR10566 7 424 4.0E-73 T 22-04-2016 AMK58_RS08600 e0a9dce5798bca418f1edb037f5872cf 151 Pfam PF03748 Flagellar basal body-associated protein FliL 72 149 5.2E-6 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 PANTHER PTHR30183:SF2 405 541 9.0E-230 T 22-04-2016 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 SUPERFAMILY SSF161098 280 532 1.01E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 PANTHER PTHR30183 6 388 9.0E-230 T 22-04-2016 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 PANTHER PTHR30183 405 541 9.0E-230 T 22-04-2016 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 SUPERFAMILY SSF161098 5 258 1.44E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 Gene3D G3DSA:1.10.3720.10 291 536 8.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 Gene3D G3DSA:1.10.3720.10 8 263 2.9E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 252 2.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS12590 bfa1e96419d576b9cb6a3ab3e334fdf9 545 PANTHER PTHR30183:SF2 6 388 9.0E-230 T 22-04-2016 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 PANTHER PTHR30308 3 146 1.4E-71 T 22-04-2016 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 SUPERFAMILY SSF74982 2 127 2.62E-46 T 22-04-2016 IPR023620 Small protein B AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 68.717 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 PANTHER PTHR30308:SF2 3 146 1.4E-71 T 22-04-2016 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 ProSitePatterns PS01317 SsrA-binding protein. 20 32 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 Gene3D G3DSA:2.40.280.10 2 122 1.2E-47 T 22-04-2016 IPR023620 Small protein B AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 2 144 1.1E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-40 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK58_RS07440 03cf3b27352ef32fc5ccad41fd3fef99 148 Pfam PF01668 SmpB protein 3 64 1.1E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK58_RS09150 d81b010a3eeee4e8706cc28e20d41ed5 132 Pfam PF09345 Domain of unknown function (DUF1987) 13 112 5.0E-37 T 22-04-2016 IPR018530 Domain of unknown function DUF1987 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 SUPERFAMILY SSF52172 135 253 3.13E-40 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 SMART SM00448 136 250 9.7E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 Gene3D G3DSA:3.40.50.2300 124 253 3.3E-44 T 22-04-2016 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 Pfam PF00072 Response regulator receiver domain 138 250 6.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 Pfam PF00072 Response regulator receiver domain 13 84 3.3E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 PANTHER PTHR24423 135 253 2.4E-51 T 22-04-2016 AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 SUPERFAMILY SSF52172 12 94 4.41E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS13890 ba485b117601abb022c96b4bfe3ccc40 258 Gene3D G3DSA:3.40.50.2300 11 93 7.7E-13 T 22-04-2016 AMK58_RS04605 ec4650db57d6a375cc39ab066a82c772 196 Pfam PF04891 NifQ 36 193 5.0E-43 T 22-04-2016 IPR006975 NifQ GO:0009399|GO:0030151 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 Pfam PF01814 Hemerythrin HHE cation binding domain 156 258 2.1E-8 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 144 264 1.3E-22 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 SUPERFAMILY SSF47188 141 264 6.15E-23 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 SUPERFAMILY SSF47188 10 127 5.89E-13 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 Gene3D G3DSA:1.20.120.50 11 128 1.3E-10 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 Gene3D G3DSA:1.20.120.50 141 263 9.5E-22 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS08125 5879c827f7dcc88ea5c82669e2bf579b 274 PANTHER PTHR37164 141 262 5.2E-20 T 22-04-2016 AMK58_RS12980 821c5552d06d5069c8846154c8513900 232 Pfam PF01738 Dienelactone hydrolase family 28 231 1.6E-35 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK58_RS12980 821c5552d06d5069c8846154c8513900 232 SUPERFAMILY SSF53474 16 229 1.82E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS12980 821c5552d06d5069c8846154c8513900 232 Gene3D G3DSA:3.40.50.1820 17 229 2.3E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS12980 821c5552d06d5069c8846154c8513900 232 PANTHER PTHR17630 23 230 6.3E-31 T 22-04-2016 AMK58_RS10115 4e85b9188be5f73ad34dd79b72936ba2 245 Gene3D G3DSA:3.30.1330.60 111 204 1.5E-7 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS10115 4e85b9188be5f73ad34dd79b72936ba2 245 SUPERFAMILY SSF103088 118 207 3.27E-7 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS10115 4e85b9188be5f73ad34dd79b72936ba2 245 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 9 61 7.4E-16 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PANTHER PTHR11063 7 376 1.1E-109 T 22-04-2016 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 Pfam PF01472 PUA domain 286 359 3.5E-24 T 22-04-2016 IPR002478 PUA domain GO:0003723 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 267 35.261 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 SUPERFAMILY SSF88697 285 375 4.25E-27 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 Gene3D G3DSA:3.40.1160.10 9 251 2.7E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 SUPERFAMILY SSF53633 9 252 6.94E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 1.7E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 1.7E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 1.7E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 1.7E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 1.7E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PIRSF PIRSF000729 5 376 2.0E-124 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 374 2.7E-122 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 Gene3D G3DSA:2.30.130.10 283 374 6.5E-28 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 PANTHER PTHR11063:SF12 7 376 1.1E-109 T 22-04-2016 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 Pfam PF00696 Amino acid kinase family 10 239 2.8E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK58_RS11680 833165ccb20f30912cc08b6e70e2e2e7 376 SMART SM00359 286 368 4.9E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 AMK58_RS11635 4232d98cb7ed7ce8d2ba155723d36791 434 Gene3D G3DSA:3.30.70.270 12 127 1.2E-6 T 22-04-2016 AMK58_RS11635 4232d98cb7ed7ce8d2ba155723d36791 434 SUPERFAMILY SSF55073 15 126 2.75E-5 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS08570 8bdeb9ca723345cb7b2bee6de8d42418 100 PANTHER PTHR12469 10 92 3.6E-26 T 22-04-2016 AMK58_RS08570 8bdeb9ca723345cb7b2bee6de8d42418 100 SUPERFAMILY SSF109910 12 91 3.4E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMK58_RS08570 8bdeb9ca723345cb7b2bee6de8d42418 100 Pfam PF03937 Flavinator of succinate dehydrogenase 18 89 3.7E-27 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMK58_RS08570 8bdeb9ca723345cb7b2bee6de8d42418 100 Gene3D G3DSA:1.10.150.250 12 93 8.8E-30 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase AMK58_RS12820 7fa78ed0459c5482a96d8e3ee25a7489 192 PANTHER PTHR35529 2 192 1.1E-58 T 22-04-2016 AMK58_RS12820 7fa78ed0459c5482a96d8e3ee25a7489 192 Pfam PF02659 Putative manganese efflux pump 32 186 2.9E-49 T 22-04-2016 IPR003810 Putative manganese efflux pump AMK58_RS12820 7fa78ed0459c5482a96d8e3ee25a7489 192 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 23.365 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP AMK58_RS08075 176759a5a47e840fb28918437296d0c9 614 Pfam PF02705 K+ potassium transporter 6 536 1.2E-210 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMK58_RS08075 176759a5a47e840fb28918437296d0c9 614 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 1 614 33.868 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup AMK58_RS08075 176759a5a47e840fb28918437296d0c9 614 PANTHER PTHR30540 4 614 7.1E-244 T 22-04-2016 AMK58_RS08075 176759a5a47e840fb28918437296d0c9 614 PANTHER PTHR30540:SF36 4 614 7.1E-244 T 22-04-2016 AMK58_RS24240 152c66f8bf8810c4d8ab94f5be1c366c 192 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 1 192 3.7E-60 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK58_RS24240 152c66f8bf8810c4d8ab94f5be1c366c 192 PANTHER PTHR11938 1 192 3.4E-51 T 22-04-2016 AMK58_RS24240 152c66f8bf8810c4d8ab94f5be1c366c 192 Pfam PF01180 Dihydroorotate dehydrogenase 1 192 3.7E-47 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK58_RS24240 152c66f8bf8810c4d8ab94f5be1c366c 192 SUPERFAMILY SSF51395 1 192 1.21E-49 T 22-04-2016 AMK58_RS24240 152c66f8bf8810c4d8ab94f5be1c366c 192 Gene3D G3DSA:3.20.20.70 1 192 2.6E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS00615 67b206a7e225afc0bd15a62dfa3b5257 273 PANTHER PTHR35024 145 273 2.1E-17 T 22-04-2016 AMK58_RS00615 67b206a7e225afc0bd15a62dfa3b5257 273 PANTHER PTHR35024:SF2 145 273 2.1E-17 T 22-04-2016 AMK58_RS00615 67b206a7e225afc0bd15a62dfa3b5257 273 Pfam PF04519 Polymer-forming cytoskeletal 145 240 4.7E-19 T 22-04-2016 IPR007607 Protein of unknown function DUF583 AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 SMART SM00670 17 136 0.0064 T 22-04-2016 IPR002716 PIN domain AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 18 136 1.7E-14 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 PANTHER PTHR34610 13 155 6.0E-19 T 22-04-2016 AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 SUPERFAMILY SSF88723 18 140 4.77E-14 T 22-04-2016 IPR029060 PIN domain-like AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 Pfam PF13470 PIN domain 18 132 6.0E-18 T 22-04-2016 IPR002716 PIN domain AMK58_RS02350 128d26a8a97f50439729a4baa97c004d 156 PANTHER PTHR34610:SF3 13 155 6.0E-19 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 Gene3D G3DSA:3.40.190.10 115 202 1.1E-11 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 SUPERFAMILY SSF53850 37 256 1.66E-46 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 255 1.6E-39 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 PANTHER PTHR18966 32 127 1.1E-20 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 Gene3D G3DSA:3.40.190.10 35 114 2.3E-27 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 Gene3D G3DSA:3.40.190.10 219 256 2.3E-27 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 PANTHER PTHR18966:SF243 32 127 1.1E-20 T 22-04-2016 AMK58_RS08080 085c643498db00d421948e8c8e470c4b 265 SMART SM00062 36 260 2.6E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS06630 5bb459746e0bcc90bf388a1aab58afc2 650 Gene3D G3DSA:3.40.50.2300 526 649 2.2E-31 T 22-04-2016 AMK58_RS06630 5bb459746e0bcc90bf388a1aab58afc2 650 SMART SM00448 529 643 2.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06630 5bb459746e0bcc90bf388a1aab58afc2 650 Pfam PF00072 Response regulator receiver domain 531 643 4.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06630 5bb459746e0bcc90bf388a1aab58afc2 650 SUPERFAMILY SSF52172 526 649 1.27E-33 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06630 5bb459746e0bcc90bf388a1aab58afc2 650 PANTHER PTHR26402 529 650 4.6E-33 T 22-04-2016 AMK58_RS07040 0b0d1c73a61d0e2aadccd7984006f12b 244 Pfam PF05239 PRC-barrel domain 53 103 2.6E-5 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS07040 0b0d1c73a61d0e2aadccd7984006f12b 244 Gene3D G3DSA:2.30.30.240 49 105 3.6E-7 T 22-04-2016 AMK58_RS07040 0b0d1c73a61d0e2aadccd7984006f12b 244 SUPERFAMILY SSF50346 48 106 1.51E-7 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS00280 2bf076d5a7e028a8f9155016f4e9a18f 148 PIRSF PIRSF029509 4 144 7.9E-37 T 22-04-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane AMK58_RS11960 cbba3714f163fcde0470bf7efcc0c4ce 370 PANTHER PTHR30325 8 351 1.2E-200 T 22-04-2016 AMK58_RS11960 cbba3714f163fcde0470bf7efcc0c4ce 370 Gene3D G3DSA:1.10.3720.10 138 344 1.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11960 cbba3714f163fcde0470bf7efcc0c4ce 370 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 165 347 2.1E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11960 cbba3714f163fcde0470bf7efcc0c4ce 370 SUPERFAMILY SSF161098 142 329 5.76E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 SUPERFAMILY SSF55120 10 237 2.27E-76 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 239 8.2E-14 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 PANTHER PTHR13767 4 310 3.8E-108 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 310 18.585 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 1.7E-69 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 PANTHER PTHR13767:SF2 4 310 3.8E-108 T 22-04-2016 AMK58_RS00770 37a1255c736d5a930aa53c24134acd8c 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 2.8E-50 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 SUPERFAMILY SSF53383 4 399 3.02E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 234 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 PANTHER PTHR11601 1 400 3.3E-123 T 22-04-2016 AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 Gene3D G3DSA:3.40.640.10 31 283 1.7E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 Pfam PF00266 Aminotransferase class-V 20 393 1.4E-63 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 Gene3D G3DSA:3.90.1150.10 284 399 3.5E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS04465 2d7c763ee359389941e9f6ddadbcb1e6 400 PANTHER PTHR11601:SF42 1 400 3.3E-123 T 22-04-2016 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 ProSitePatterns PS00519 AsnC-type HTH domain signature. 17 43 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 SMART SM00344 2 105 1.0E-11 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 PANTHER PTHR30154 2 142 1.5E-24 T 22-04-2016 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 45 8.5E-7 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 15 26 8.5E-7 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 SUPERFAMILY SSF54909 61 139 1.74E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 Gene3D G3DSA:3.30.70.920 74 135 4.0E-11 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 Pfam PF01037 Lrp/AsnC ligand binding domain 74 135 1.5E-10 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 45 1.1E-13 T 22-04-2016 AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 SUPERFAMILY SSF46785 3 52 8.47E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS02765 7080db9e5433b9d0a674d31bd3590949 142 Gene3D G3DSA:1.10.10.10 2 50 8.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12420 2be498fe167b632315c1ed12b209a560 389 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 235 356 2.7E-6 T 22-04-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 PANTHER PTHR24023:SF593 54 400 4.5E-45 T 22-04-2016 AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 Gene3D G3DSA:3.30.1540.10 240 322 1.7E-31 T 22-04-2016 AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 Pfam PF02515 CoA-transferase family III 26 390 2.2E-128 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 SUPERFAMILY SSF89796 25 413 2.35E-135 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 PANTHER PTHR24023 54 400 4.5E-45 T 22-04-2016 AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 Gene3D G3DSA:3.40.50.10540 24 234 3.4E-114 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS03165 07ff9d4151c900884d59517de2f39709 413 Gene3D G3DSA:3.40.50.10540 323 413 3.4E-114 T 22-04-2016 IPR023606 CoA-transferase family III domain AMK58_RS22415 9db0ee3e43afeca1adb23abf11e1b568 170 PANTHER PTHR34820 12 169 2.1E-26 T 22-04-2016 AMK58_RS22415 9db0ee3e43afeca1adb23abf11e1b568 170 PANTHER PTHR34820:SF2 12 169 2.1E-26 T 22-04-2016 AMK58_RS22415 9db0ee3e43afeca1adb23abf11e1b568 170 Pfam PF05425 Copper resistance protein D 76 170 4.5E-21 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 SUPERFAMILY SSF53383 6 398 1.11E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 PANTHER PTHR11751 14 400 4.2E-211 T 22-04-2016 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 Pfam PF00155 Aminotransferase class I and II 33 379 7.1E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 Gene3D G3DSA:3.90.1150.10 267 399 4.7E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 Gene3D G3DSA:3.40.640.10 46 266 5.4E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS06775 bcf4122355f3e03efea034cf3506b452 424 PANTHER PTHR11751:SF302 14 400 4.2E-211 T 22-04-2016 AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 PANTHER PTHR11085:SF17 2 240 7.0E-71 T 22-04-2016 AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Pfam PF02146 Sir2 family 18 192 3.9E-47 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Gene3D G3DSA:3.40.50.1220 3 26 5.1E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Gene3D G3DSA:3.40.50.1220 76 118 5.1E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Gene3D G3DSA:3.40.50.1220 171 236 5.1E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 PANTHER PTHR11085 2 240 7.0E-71 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 SUPERFAMILY SSF52467 3 240 3.48E-71 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 11 242 53.883 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Gene3D G3DSA:3.30.1600.10 28 66 6.3E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMK58_RS01455 572db3bc5f1caf55875b745a8e3fde18 243 Gene3D G3DSA:3.30.1600.10 119 164 6.3E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMK58_RS04075 72978a5b0c366dea3e96a2e7725af7cd 75 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 6 68 7.0E-9 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system AMK58_RS04075 72978a5b0c366dea3e96a2e7725af7cd 75 SUPERFAMILY SSF143100 14 67 1.96E-14 T 22-04-2016 AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 343 383 2.1E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 SUPERFAMILY SSF56281 2 402 4.72E-80 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 Gene3D G3DSA:3.60.15.10 2 236 1.5E-59 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 PANTHER PTHR11203:SF22 1 505 4.8E-152 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 Pfam PF12706 Beta-lactamase superfamily domain 28 148 1.1E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 SMART SM00849 1 195 1.8E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS06200 e3deed3fb792be0d99b4be6f3d96b34e 533 PANTHER PTHR11203 1 505 4.8E-152 T 22-04-2016 AMK58_RS08975 b18b0bc158fe535658a4e3e6ceddf9d2 521 SUPERFAMILY SSF47090 280 336 8.32E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS08975 b18b0bc158fe535658a4e3e6ceddf9d2 521 Gene3D G3DSA:1.10.101.10 280 335 1.0E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS08975 b18b0bc158fe535658a4e3e6ceddf9d2 521 Pfam PF01471 Putative peptidoglycan binding domain 281 335 2.4E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK58_RS08975 b18b0bc158fe535658a4e3e6ceddf9d2 521 Pfam PF14326 Domain of unknown function (DUF4384) 387 465 7.5E-20 T 22-04-2016 IPR025493 Domain of unknown function DUF4384 AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 Gene3D G3DSA:3.40.50.150 190 401 1.6E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 PANTHER PTHR11061:SF12 14 400 6.7E-90 T 22-04-2016 AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 179 361 2.4E-18 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 SUPERFAMILY SSF88697 13 80 2.73E-11 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 PANTHER PTHR11061 14 400 6.7E-90 T 22-04-2016 AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 SUPERFAMILY SSF53335 92 398 7.33E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 Gene3D G3DSA:3.30.750.80 85 186 2.6E-32 T 22-04-2016 AMK58_RS00970 82fa897faeb7dfc34764a71d9464b353 402 Gene3D G3DSA:2.30.130.10 13 80 1.5E-15 T 22-04-2016 IPR015947 PUA-like domain AMK58_RS01065 54e6617096839ddecc3762bc219281e7 145 SUPERFAMILY SSF75169 84 134 3.03E-13 T 22-04-2016 IPR027396 DsrEFH-like AMK58_RS01065 54e6617096839ddecc3762bc219281e7 145 SUPERFAMILY SSF75169 7 51 3.03E-13 T 22-04-2016 IPR027396 DsrEFH-like AMK58_RS01065 54e6617096839ddecc3762bc219281e7 145 Pfam PF02635 DsrE/DsrF-like family 19 133 1.5E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein AMK58_RS01065 54e6617096839ddecc3762bc219281e7 145 Gene3D G3DSA:3.40.1260.10 3 145 2.8E-23 T 22-04-2016 IPR027396 DsrEFH-like AMK58_RS05085 29b91f7380d9cc2646471913b20494c2 163 Pfam PF00583 Acetyltransferase (GNAT) family 57 138 4.6E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS05085 29b91f7380d9cc2646471913b20494c2 163 Gene3D G3DSA:3.40.630.30 2 157 1.8E-56 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05085 29b91f7380d9cc2646471913b20494c2 163 SUPERFAMILY SSF55729 4 150 2.06E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS05085 29b91f7380d9cc2646471913b20494c2 163 PANTHER PTHR10545 1 160 8.0E-71 T 22-04-2016 AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 SUPERFAMILY SSF55194 1 172 4.97E-65 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 Pfam PF01765 Ribosome recycling factor 8 171 3.5E-60 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 2.6E-62 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 Gene3D G3DSA:1.10.132.20 54 173 7.4E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 PANTHER PTHR20982 1 173 1.3E-76 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK58_RS06280 2e1187b9ae3dfa0bae962e2ac26c1018 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 22.961 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK58_RS08180 149471781458ac52515ed49fc58d4e81 254 PANTHER PTHR30151 20 254 1.4E-52 T 22-04-2016 AMK58_RS08180 149471781458ac52515ed49fc58d4e81 254 Gene3D G3DSA:1.10.3720.10 60 248 7.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08180 149471781458ac52515ed49fc58d4e81 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 8.8E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08180 149471781458ac52515ed49fc58d4e81 254 PANTHER PTHR30151:SF8 20 254 1.4E-52 T 22-04-2016 AMK58_RS08180 149471781458ac52515ed49fc58d4e81 254 SUPERFAMILY SSF161098 57 237 9.68E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11175 db02c080075c44ff9cd5129c9954e069 778 Gene3D G3DSA:1.20.1640.10 616 759 2.0E-10 T 22-04-2016 AMK58_RS11175 db02c080075c44ff9cd5129c9954e069 778 Gene3D G3DSA:1.20.1640.10 242 390 1.1E-9 T 22-04-2016 AMK58_RS11175 db02c080075c44ff9cd5129c9954e069 778 SUPERFAMILY SSF82866 186 390 1.83E-14 T 22-04-2016 AMK58_RS11175 db02c080075c44ff9cd5129c9954e069 778 SUPERFAMILY SSF82866 609 760 3.01E-18 T 22-04-2016 AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 SUPERFAMILY SSF52540 5 227 4.03E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 Pfam PF00005 ABC transporter 26 173 3.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 Gene3D G3DSA:3.40.50.300 3 227 2.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 SMART SM00382 34 222 9.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 PANTHER PTHR24220 7 229 1.7E-92 T 22-04-2016 AMK58_RS06240 57cada9439c23ad263dad1e136e399a4 229 PANTHER PTHR24220:SF111 7 229 1.7E-92 T 22-04-2016 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 1.3E-19 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 PANTHER PTHR18968 1 522 9.5E-92 T 22-04-2016 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Gene3D G3DSA:3.40.50.1220 183 334 2.0E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 PIRSF PIRSF036565 1 545 3.4E-148 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 517 6.7E-25 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 173 2.1E-37 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 SUPERFAMILY SSF52518 349 528 3.69E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 SUPERFAMILY SSF52518 1 182 1.67E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Gene3D G3DSA:3.40.50.970 349 527 7.7E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 Gene3D G3DSA:3.40.50.970 2 179 5.1E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 SUPERFAMILY SSF52467 162 336 1.07E-29 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS11560 0e3ed4411af4886e9239eb337757e330 545 TIGRFAM TIGR03394 indol_phenyl_DC: indolepyruvate/phenylpyruvate decarboxylase 2 535 0.0 T 22-04-2016 IPR017765 Indole-3-pyruvate decarboxylasese GO:0009851|GO:0047434 KEGG: 00380+4.1.1.74|MetaCyc: PWY-5081|UniPathway: UPA00151 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 201 388 4.1E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 PANTHER PTHR30465:SF33 166 389 6.5E-175 T 22-04-2016 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 PANTHER PTHR30465:SF33 32 145 6.5E-175 T 22-04-2016 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 SUPERFAMILY SSF161098 178 375 3.92E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 Gene3D G3DSA:1.10.3720.10 177 387 1.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 PANTHER PTHR30465 166 389 6.5E-175 T 22-04-2016 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 PANTHER PTHR30465 32 145 6.5E-175 T 22-04-2016 AMK58_RS00255 bd2ac268341f1b8f3c952c7121c351a0 390 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 39 91 9.1E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK58_RS13290 a41be1008f4568a26a46277a0f9cfba5 230 SUPERFAMILY SSF56524 27 229 1.44E-63 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS13290 a41be1008f4568a26a46277a0f9cfba5 230 PANTHER PTHR19372 19 229 3.7E-68 T 22-04-2016 AMK58_RS13290 a41be1008f4568a26a46277a0f9cfba5 230 Gene3D G3DSA:3.90.420.10 46 228 2.3E-54 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS13290 a41be1008f4568a26a46277a0f9cfba5 230 Pfam PF00174 Oxidoreductase molybdopterin binding domain 67 211 7.2E-38 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK58_RS06075 1903b11b46d41bfa156c038171d2379e 516 PANTHER PTHR28641 95 511 1.5E-160 T 22-04-2016 AMK58_RS06075 1903b11b46d41bfa156c038171d2379e 516 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 113 485 9.8E-150 T 22-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 AMK58_RS06075 1903b11b46d41bfa156c038171d2379e 516 PANTHER PTHR28641:SF1 95 511 1.5E-160 T 22-04-2016 AMK58_RS01495 b2eac0d8c335295ce2659c83dc179156 94 PANTHER PTHR33219:SF5 1 89 1.6E-19 T 22-04-2016 AMK58_RS01495 b2eac0d8c335295ce2659c83dc179156 94 PANTHER PTHR33219 1 89 1.6E-19 T 22-04-2016 AMK58_RS01495 b2eac0d8c335295ce2659c83dc179156 94 Pfam PF02325 YGGT family 10 86 5.4E-23 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 AMK58_RS04115 33b1a026eaa8881e7fe2bb562a28d555 144 Pfam PF12616 Protein of unknown function (DUF3775) 66 136 5.0E-19 T 22-04-2016 IPR022254 Protein of unknown function DUF3775 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 Gene3D G3DSA:1.20.1250.20 255 442 1.6E-16 T 22-04-2016 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 Gene3D G3DSA:1.20.1250.20 15 212 8.4E-19 T 22-04-2016 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 PANTHER PTHR12778 16 206 2.3E-102 T 22-04-2016 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 PANTHER PTHR12778 226 434 2.3E-102 T 22-04-2016 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 Pfam PF07690 Major Facilitator Superfamily 22 397 1.1E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 SUPERFAMILY SSF103473 14 210 3.14E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS08615 5a7d6dd35740d92498d0bd0272e8a5de 447 SUPERFAMILY SSF103473 238 440 3.14E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 PANTHER PTHR32322 1 284 5.3E-94 T 22-04-2016 AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 PANTHER PTHR32322:SF9 1 284 5.3E-94 T 22-04-2016 AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 SUPERFAMILY SSF103481 203 283 9.02E-10 T 22-04-2016 AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 SUPERFAMILY SSF103481 39 134 2.09E-12 T 22-04-2016 AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 Pfam PF00892 EamA-like transporter family 143 282 4.4E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS06250 19e91e3b7adc2c02c76f3fb6b1b5d070 295 Pfam PF00892 EamA-like transporter family 6 133 1.6E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS00315 46722c6779ee689f085ae99182eed3c8 385 SUPERFAMILY SSF56935 18 385 2.14E-33 T 22-04-2016 AMK58_RS00315 46722c6779ee689f085ae99182eed3c8 385 Gene3D G3DSA:2.40.160.10 28 371 4.7E-44 T 22-04-2016 IPR023614 Porin domain AMK58_RS00315 46722c6779ee689f085ae99182eed3c8 385 Pfam PF13609 Gram-negative porin 10 357 3.5E-48 T 22-04-2016 AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 Pfam PF06850 PHB de-polymerase C-terminus 204 405 1.8E-92 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 Gene3D G3DSA:3.40.50.1820 91 224 5.4E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 Gene3D G3DSA:3.40.50.1820 273 405 5.4E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 SUPERFAMILY SSF53474 91 403 6.58E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 PIRSF PIRSF020818 1 406 2.0E-190 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMK58_RS13215 253a438ec88204015685b7f33d930b16 406 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 405 1.1E-180 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 SUPERFAMILY SSF52540 313 501 6.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 PRINTS PR01874 DNA repair protein radA signature 465 493 4.3E-6 T 22-04-2016 AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 PRINTS PR01874 DNA repair protein radA signature 312 340 4.3E-6 T 22-04-2016 AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 SUPERFAMILY SSF46785 581 637 7.34E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 Gene3D G3DSA:1.10.10.10 585 637 1.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 Gene3D G3DSA:3.40.50.300 304 514 4.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 Pfam PF13481 AAA domain 309 474 4.4E-20 T 22-04-2016 AMK58_RS01750 a48da89303386616f83e12aa5b2fa29b 644 SMART SM00382 320 494 6.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07955 0bfcde0285a62c3889d768846ea33c40 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 83 4.1E-26 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 AMK58_RS07955 0bfcde0285a62c3889d768846ea33c40 83 Pfam PF02597 ThiS family 3 83 1.8E-20 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AMK58_RS07955 0bfcde0285a62c3889d768846ea33c40 83 Gene3D G3DSA:3.10.20.30 1 83 6.8E-25 T 22-04-2016 IPR012675 Beta-grasp domain AMK58_RS07955 0bfcde0285a62c3889d768846ea33c40 83 PANTHER PTHR33359 1 83 2.4E-24 T 22-04-2016 AMK58_RS07955 0bfcde0285a62c3889d768846ea33c40 83 SUPERFAMILY SSF54285 1 83 1.57E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 SUPERFAMILY SSF53383 7 258 1.37E-56 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 Pfam PF00266 Aminotransferase class-V 9 258 1.7E-43 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 PANTHER PTHR11601:SF42 3 258 6.8E-88 T 22-04-2016 AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 PANTHER PTHR11601 3 258 6.8E-88 T 22-04-2016 AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 Gene3D G3DSA:3.40.640.10 9 254 3.2E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK58_RS18210 e4d7e4eb895e7145edfff83a96b962c5 258 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 173 193 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK58_RS09015 a2d688683995c472b92b40902a964192 108 Gene3D G3DSA:1.20.5.340 34 93 7.1E-4 T 22-04-2016 AMK58_RS03115 73ff36b71ab1d0c30534d2b961583d8f 304 SUPERFAMILY SSF53300 98 205 1.07E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03115 73ff36b71ab1d0c30534d2b961583d8f 304 PANTHER PTHR22550:SF5 1 205 1.5E-25 T 22-04-2016 AMK58_RS03115 73ff36b71ab1d0c30534d2b961583d8f 304 Pfam PF13519 von Willebrand factor type A domain 98 202 5.7E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK58_RS03115 73ff36b71ab1d0c30534d2b961583d8f 304 PANTHER PTHR22550 1 205 1.5E-25 T 22-04-2016 AMK58_RS08285 98bee4317eafc9333b2ab5340b598222 155 Pfam PF04355 SmpA / OmlA family 30 104 3.3E-17 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMK58_RS07015 45d17fccfe2a3b40edbf659efc79ff2b 249 PANTHER PTHR30269 1 249 6.7E-73 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS07015 45d17fccfe2a3b40edbf659efc79ff2b 249 PANTHER PTHR30269:SF10 1 249 6.7E-73 T 22-04-2016 AMK58_RS07015 45d17fccfe2a3b40edbf659efc79ff2b 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 241 3.1E-33 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS08130 8f6e960c16342ee6ba2e53ff1d392fc6 187 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 34.67 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 AMK58_RS08130 8f6e960c16342ee6ba2e53ff1d392fc6 187 Pfam PF03079 ARD/ARD' family 29 165 1.2E-27 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 AMK58_RS08130 8f6e960c16342ee6ba2e53ff1d392fc6 187 Gene3D G3DSA:2.60.120.10 4 179 4.4E-46 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS08130 8f6e960c16342ee6ba2e53ff1d392fc6 187 PANTHER PTHR23418 65 177 6.8E-27 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 AMK58_RS08130 8f6e960c16342ee6ba2e53ff1d392fc6 187 SUPERFAMILY SSF51182 3 178 4.65E-39 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS00115 fb54cadd1b053c743913dba3a7f2ca79 253 Pfam PF03692 Putative zinc- or iron-chelating domain 6 112 3.7E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein AMK58_RS06465 37419a558ef48e440e0efb09140b6e24 145 Gene3D G3DSA:1.10.150.320 65 128 8.7E-15 T 22-04-2016 AMK58_RS06465 37419a558ef48e440e0efb09140b6e24 145 SUPERFAMILY SSF81585 63 129 4.84E-16 T 22-04-2016 AMK58_RS06465 37419a558ef48e440e0efb09140b6e24 145 Pfam PF12836 Helix-hairpin-helix motif 69 127 6.4E-14 T 22-04-2016 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 SUPERFAMILY SSF51905 477 520 1.68E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 SUPERFAMILY SSF51905 50 376 1.68E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 PANTHER PTHR10668 50 520 1.0E-70 T 22-04-2016 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 Pfam PF01593 Flavin containing amine oxidoreductase 57 335 7.5E-21 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 Gene3D G3DSA:3.50.50.60 258 358 4.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 Gene3D G3DSA:3.50.50.60 208 209 4.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 Gene3D G3DSA:3.50.50.60 50 109 4.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS05620 a7b719d3123f04d4cb6519b6a2a4c598 535 PANTHER PTHR10668:SF4 50 520 1.0E-70 T 22-04-2016 AMK58_RS06700 ce0c90595466e40f32ce3c2baed86ac1 212 SUPERFAMILY SSF110997 117 190 8.5E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS06700 ce0c90595466e40f32ce3c2baed86ac1 212 Pfam PF05036 Sporulation related domain 117 186 6.6E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS06700 ce0c90595466e40f32ce3c2baed86ac1 212 Gene3D G3DSA:3.30.70.1070 114 190 3.3E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 1 176 26.094 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 Gene3D G3DSA:3.30.1380.10 2 168 8.9E-54 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 PANTHER PTHR22935 1 174 1.8E-48 T 22-04-2016 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 PANTHER PTHR22935:SF81 1 174 1.8E-48 T 22-04-2016 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 Pfam PF01427 D-ala-D-ala dipeptidase 11 174 1.0E-43 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 PIRSF PIRSF026671 2 178 6.0E-49 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AMK58_RS00665 bf00e0ee5e67bec47b712f22b29ab69b 183 SUPERFAMILY SSF55166 3 167 6.02E-54 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK58_RS04310 e62480decfa7e733a52c296d676f484f 164 Pfam PF11749 Protein of unknown function (DUF3305) 13 154 7.0E-45 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 AMK58_RS00345 4432b9ee313d9dcb179591a478153a09 454 Pfam PF13449 Esterase-like activity of phytase 97 425 2.4E-63 T 22-04-2016 IPR027372 Phytase-like domain AMK58_RS00345 4432b9ee313d9dcb179591a478153a09 454 PANTHER PTHR37957 1 453 6.1E-117 T 22-04-2016 AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 Pfam PF13616 PPIC-type PPIASE domain 152 252 2.2E-28 T 22-04-2016 AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 PANTHER PTHR10657:SF11 49 294 3.0E-44 T 22-04-2016 AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 SUPERFAMILY SSF109998 51 189 5.1E-17 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 SUPERFAMILY SSF54534 150 250 8.5E-34 T 22-04-2016 AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 Gene3D G3DSA:3.10.50.40 156 273 4.2E-47 T 22-04-2016 AMK58_RS12885 ca470a7fd6617dc0abc9e471294c5873 315 PANTHER PTHR10657 49 294 3.0E-44 T 22-04-2016 AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 PANTHER PTHR24220 19 241 9.6E-87 T 22-04-2016 AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 SMART SM00382 46 227 3.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 Pfam PF00005 ABC transporter 37 176 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 PANTHER PTHR24220:SF589 19 241 9.6E-87 T 22-04-2016 AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 Gene3D G3DSA:3.40.50.300 12 230 2.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10640 c320509d049c04d56bb9dbddaa0b5802 269 SUPERFAMILY SSF52540 17 247 7.99E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 SUPERFAMILY SSF161098 91 158 8.01E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 PANTHER PTHR30085 1 179 1.7E-156 T 22-04-2016 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 PANTHER PTHR30085 258 399 1.7E-156 T 22-04-2016 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 SUPERFAMILY SSF161098 190 383 2.75E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 90 155 2.3E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 Gene3D G3DSA:1.10.3720.10 266 394 1.3E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 Gene3D G3DSA:1.10.3720.10 89 161 1.3E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 394 2.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 PANTHER PTHR30085:SF1 1 179 1.7E-156 T 22-04-2016 AMK58_RS07665 8591af51f508155017fe5b0037c83e3e 399 PANTHER PTHR30085:SF1 258 399 1.7E-156 T 22-04-2016 AMK58_RS15295 362f4c74cf24e1f89e850641a4605b32 86 SUPERFAMILY SSF53686 2 85 1.33E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK58_RS15295 362f4c74cf24e1f89e850641a4605b32 86 PANTHER PTHR10314 1 86 3.3E-35 T 22-04-2016 AMK58_RS15295 362f4c74cf24e1f89e850641a4605b32 86 Gene3D G3DSA:3.40.50.1100 2 86 4.0E-33 T 22-04-2016 AMK58_RS15295 362f4c74cf24e1f89e850641a4605b32 86 PANTHER PTHR10314:SF3 1 86 3.3E-35 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK58_RS07110 55dba61664e3ffa89a88006805166915 290 Gene3D G3DSA:2.30.30.240 98 156 3.2E-13 T 22-04-2016 AMK58_RS07110 55dba61664e3ffa89a88006805166915 290 PANTHER PTHR36505:SF1 92 209 8.9E-34 T 22-04-2016 AMK58_RS07110 55dba61664e3ffa89a88006805166915 290 PANTHER PTHR36505 92 209 8.9E-34 T 22-04-2016 AMK58_RS07110 55dba61664e3ffa89a88006805166915 290 Pfam PF05239 PRC-barrel domain 96 170 8.2E-12 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS07110 55dba61664e3ffa89a88006805166915 290 SUPERFAMILY SSF50346 96 209 6.47E-21 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS07840 1604eb7dac312bab60471ffcbd01ba11 277 Gene3D G3DSA:1.10.3720.10 9 266 4.7E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07840 1604eb7dac312bab60471ffcbd01ba11 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 266 2.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07840 1604eb7dac312bab60471ffcbd01ba11 277 PANTHER PTHR30222 15 274 2.7E-79 T 22-04-2016 AMK58_RS07840 1604eb7dac312bab60471ffcbd01ba11 277 SUPERFAMILY SSF161098 7 262 6.07E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS07840 1604eb7dac312bab60471ffcbd01ba11 277 PANTHER PTHR30222:SF6 15 274 2.7E-79 T 22-04-2016 AMK58_RS11160 7c4735a62302207665f5d5e097a47afe 160 SUPERFAMILY SSF54637 9 146 1.31E-16 T 22-04-2016 IPR029069 HotDog domain AMK58_RS11160 7c4735a62302207665f5d5e097a47afe 160 PIRSF PIRSF020565 1 156 7.1E-35 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AMK58_RS11160 7c4735a62302207665f5d5e097a47afe 160 Gene3D G3DSA:3.10.129.10 10 142 3.3E-12 T 22-04-2016 IPR029069 HotDog domain AMK58_RS13525 8d4769db80802d24e4334e4ce6083d30 92 Pfam PF03050 Transposase IS66 family 1 91 2.7E-19 T 22-04-2016 IPR004291 Transposase, IS66 AMK58_RS03860 29c03c22e4676ab1936aca2a2d0defd3 608 SUPERFAMILY SSF52743 11 250 1.17E-32 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS03860 29c03c22e4676ab1936aca2a2d0defd3 608 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 415 506 1.1E-29 T 22-04-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784|UniPathway: UPA00114 AMK58_RS03860 29c03c22e4676ab1936aca2a2d0defd3 608 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 278 369 7.2E-30 T 22-04-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784|UniPathway: UPA00114 AMK58_RS03860 29c03c22e4676ab1936aca2a2d0defd3 608 Gene3D G3DSA:3.40.50.200 10 249 2.5E-26 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 Gene3D G3DSA:3.30.70.1350 209 290 4.0E-28 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 PANTHER PTHR11562:SF55 8 298 9.4E-92 T 22-04-2016 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 Pfam PF01545 Cation efflux family 15 208 5.1E-38 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 PANTHER PTHR11562 8 298 9.4E-92 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 SUPERFAMILY SSF160240 212 290 4.45E-22 T 22-04-2016 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 3.8E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 289 3.1E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 SUPERFAMILY SSF161111 8 209 5.23E-48 T 22-04-2016 AMK58_RS09105 1f82db971e9ca0001b27d3cad784162b 311 Gene3D G3DSA:1.20.1510.10 11 208 4.1E-41 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain AMK58_RS13430 c02433a5deb56c42e2e73a46b033f9ad 128 SUPERFAMILY SSF46689 1 111 1.97E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS13430 c02433a5deb56c42e2e73a46b033f9ad 128 Pfam PF01710 Transposase 4 120 5.7E-8 T 22-04-2016 IPR002622 Transposase, Synechocystis PCC 6803 AMK58_RS13430 c02433a5deb56c42e2e73a46b033f9ad 128 PANTHER PTHR23022 3 128 2.9E-13 T 22-04-2016 AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 PANTHER PTHR30289 20 183 1.5E-83 T 22-04-2016 AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 PANTHER PTHR30289:SF0 20 183 1.5E-83 T 22-04-2016 AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 SUPERFAMILY SSF49777 23 182 4.45E-53 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 179 1.4E-43 T 22-04-2016 IPR005247 YbhB/YbcL AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 Gene3D G3DSA:3.90.280.10 22 182 4.3E-56 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK58_RS07455 26810cb0dc6894b593dc21da13bf691d 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 48 181 1.2E-36 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 Gene3D G3DSA:3.90.550.10 8 199 1.0E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 PANTHER PTHR10859:SF84 1 243 6.4E-70 T 22-04-2016 AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 Pfam PF00535 Glycosyl transferase family 2 6 123 2.7E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 SUPERFAMILY SSF53448 5 232 1.69E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 350 545 2.7E-12 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMK58_RS11140 d4c93d2fa6d2fafca15b30f6dfcfe692 557 PANTHER PTHR10859 1 243 6.4E-70 T 22-04-2016 AMK58_RS05140 0e9737567a08914ce0f9e0c9f0168924 153 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 5 110 2.9E-29 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 AMK58_RS05140 0e9737567a08914ce0f9e0c9f0168924 153 Pfam PF09523 Protein of unknown function (DUF2390) 6 107 3.7E-34 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 AMK58_RS05050 737a4d93e4a1691587f1babe68827465 885 PANTHER PTHR38434 59 884 5.7E-46 T 22-04-2016 AMK58_RS05050 737a4d93e4a1691587f1babe68827465 885 PANTHER PTHR38434:SF1 59 884 5.7E-46 T 22-04-2016 AMK58_RS05050 737a4d93e4a1691587f1babe68827465 885 PIRSF PIRSF035905 19 881 3.6E-121 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AMK58_RS05050 737a4d93e4a1691587f1babe68827465 885 Pfam PF10101 Predicted membrane protein (DUF2339) 97 873 5.3E-137 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane AMK58_RS09370 f3a063e65a3742403941b3032060b448 268 PANTHER PTHR30269 4 256 1.8E-92 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS09370 f3a063e65a3742403941b3032060b448 268 Pfam PF01925 Sulfite exporter TauE/SafE 12 247 1.3E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS09370 f3a063e65a3742403941b3032060b448 268 PANTHER PTHR30269:SF0 4 256 1.8E-92 T 22-04-2016 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 PANTHER PTHR32309:SF13 156 756 7.5E-138 T 22-04-2016 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 PANTHER PTHR32309:SF13 40 138 7.5E-138 T 22-04-2016 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 SUPERFAMILY SSF52540 561 741 4.09E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 Pfam PF02706 Chain length determinant protein 38 219 7.3E-22 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 Pfam PF13807 G-rich domain on putative tyrosine kinase 417 492 1.1E-13 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 571 739 1.4E-9 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 PANTHER PTHR32309 156 756 7.5E-138 T 22-04-2016 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 PANTHER PTHR32309 40 138 7.5E-138 T 22-04-2016 AMK58_RS12365 fce056b5fd33c7308dad8d47e01afcd3 757 Gene3D G3DSA:3.40.50.300 557 742 2.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS05045 e0b7bf9911c73f7f82af6056199b1216 256 SUPERFAMILY SSF117396 7 245 1.83E-67 T 22-04-2016 IPR002763 Protein of unknown function DUF72 AMK58_RS05045 e0b7bf9911c73f7f82af6056199b1216 256 PANTHER PTHR30348:SF3 5 246 9.1E-62 T 22-04-2016 AMK58_RS05045 e0b7bf9911c73f7f82af6056199b1216 256 PANTHER PTHR30348 5 246 9.1E-62 T 22-04-2016 AMK58_RS05045 e0b7bf9911c73f7f82af6056199b1216 256 Gene3D G3DSA:3.20.20.410 6 245 1.3E-65 T 22-04-2016 IPR002763 Protein of unknown function DUF72 AMK58_RS05045 e0b7bf9911c73f7f82af6056199b1216 256 Pfam PF01904 Protein of unknown function DUF72 30 242 5.7E-49 T 22-04-2016 IPR002763 Protein of unknown function DUF72 AMK58_RS12790 e663db9db050fd66cd62ea38d15a29d9 161 PANTHER PTHR30231 10 156 7.1E-37 T 22-04-2016 AMK58_RS12790 e663db9db050fd66cd62ea38d15a29d9 161 Gene3D G3DSA:3.30.420.10 56 156 6.9E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS12790 e663db9db050fd66cd62ea38d15a29d9 161 SUPERFAMILY SSF53098 12 154 2.5E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS12790 e663db9db050fd66cd62ea38d15a29d9 161 PANTHER PTHR30231:SF7 10 156 7.1E-37 T 22-04-2016 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 467 5.8E-66 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 SUPERFAMILY SSF55103 200 469 1.64E-72 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 Gene3D G3DSA:3.30.465.10 107 227 1.2E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 Gene3D G3DSA:3.30.43.10 13 106 4.6E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 SUPERFAMILY SSF56176 15 227 1.26E-67 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 Gene3D G3DSA:1.10.45.10 428 467 4.5E-12 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 PANTHER PTHR11748 1 479 1.1E-198 T 22-04-2016 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 PANTHER PTHR11748:SF78 1 479 1.1E-198 T 22-04-2016 AMK58_RS04810 d2a595f5c4e9be7dee40546a4e339503 495 Pfam PF01565 FAD binding domain 52 191 2.1E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK58_RS02990 e713c972058ab927249e9b8ee9a49a9a 513 Gene3D G3DSA:3.40.50.300 49 135 9.8E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS13645 bbbb46a3f273e11f753fbc2920044968 379 Pfam PF06527 TniQ 1 134 2.4E-19 T 22-04-2016 IPR009492 TniQ AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 Pfam PF00850 Histone deacetylase domain 44 320 2.9E-59 T 22-04-2016 IPR023801 Histone deacetylase domain AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 PRINTS PR01270 Histone deacetylase superfamily signature 256 266 1.8E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 PRINTS PR01270 Histone deacetylase superfamily signature 143 166 1.8E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 PRINTS PR01270 Histone deacetylase superfamily signature 176 191 1.8E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 SUPERFAMILY SSF52768 19 370 7.19E-86 T 22-04-2016 AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 PANTHER PTHR10625 29 325 6.0E-79 T 22-04-2016 IPR000286 Histone deacetylase superfamily AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 Gene3D G3DSA:3.40.800.20 20 333 1.2E-72 T 22-04-2016 IPR023801 Histone deacetylase domain AMK58_RS07605 997e1c774a76169a54abae75c8e12852 387 PANTHER PTHR10625:SF10 29 325 6.0E-79 T 22-04-2016 AMK58_RS12205 a537c6488c89f6cb6de4cfb6b82e2e3a 443 PANTHER PTHR11795:SF371 143 437 1.8E-75 T 22-04-2016 AMK58_RS12205 a537c6488c89f6cb6de4cfb6b82e2e3a 443 PANTHER PTHR11795 143 437 1.8E-75 T 22-04-2016 AMK58_RS12205 a537c6488c89f6cb6de4cfb6b82e2e3a 443 Pfam PF02653 Branched-chain amino acid transport system / permease component 147 427 1.4E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS09510 3630b49999915047ff9b95ca5ce287cc 246 PANTHER PTHR23427 3 243 5.0E-51 T 22-04-2016 AMK58_RS09510 3630b49999915047ff9b95ca5ce287cc 246 PANTHER PTHR23427:SF2 3 243 5.0E-51 T 22-04-2016 AMK58_RS09510 3630b49999915047ff9b95ca5ce287cc 246 Pfam PF02104 SURF1 family 24 228 8.8E-45 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 AMK58_RS10625 c7de8469568525ac6606baba83c1b6f0 390 Pfam PF06187 Protein of unknown function (DUF993) 5 387 1.4E-189 T 22-04-2016 IPR009334 Protein of unknown function DUF993 AMK58_RS10625 c7de8469568525ac6606baba83c1b6f0 390 Gene3D G3DSA:3.20.20.70 81 329 4.8E-5 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK58_RS10625 c7de8469568525ac6606baba83c1b6f0 390 SUPERFAMILY SSF51569 58 333 3.87E-11 T 22-04-2016 AMK58_RS13625 1f7822a1da70eef80d6e3fa0a6c4d1bf 112 SUPERFAMILY SSF53335 60 111 6.39E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS13625 1f7822a1da70eef80d6e3fa0a6c4d1bf 112 Gene3D G3DSA:3.40.50.150 59 111 2.8E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04110 88bc3bc646a3dccfe4a6ca6ddb11db6c 219 Pfam PF01738 Dienelactone hydrolase family 103 196 4.1E-6 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK58_RS04110 88bc3bc646a3dccfe4a6ca6ddb11db6c 219 SUPERFAMILY SSF53474 18 215 3.95E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04110 88bc3bc646a3dccfe4a6ca6ddb11db6c 219 Gene3D G3DSA:3.40.50.1820 18 216 3.9E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04110 88bc3bc646a3dccfe4a6ca6ddb11db6c 219 PANTHER PTHR10992 103 214 6.4E-13 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 SUPERFAMILY SSF58104 181 428 9.02E-58 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 SUPERFAMILY SSF58104 83 112 9.02E-58 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 Gene3D G3DSA:1.10.287.950 190 400 1.5E-42 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PANTHER PTHR32089 153 432 1.4E-94 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PANTHER PTHR32089 37 92 1.4E-94 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PANTHER PTHR32089:SF40 153 432 1.4E-94 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PANTHER PTHR32089:SF40 37 92 1.4E-94 T 22-04-2016 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 254 428 1.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 SMART SM00283 175 429 3.9E-37 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 4.7E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 300 4.7E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS04445 a3baf20e26c07317bcaf03b791e10d85 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 196 225 4.7E-17 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK58_RS07940 12d5aa37b2c41f2be62842f0ad937537 211 Pfam PF01810 LysE type translocator 15 207 3.5E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS07940 12d5aa37b2c41f2be62842f0ad937537 211 PIRSF PIRSF006324 1 210 8.9E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS07940 12d5aa37b2c41f2be62842f0ad937537 211 PANTHER PTHR30086:SF14 1 210 1.4E-52 T 22-04-2016 AMK58_RS07940 12d5aa37b2c41f2be62842f0ad937537 211 PANTHER PTHR30086 1 210 1.4E-52 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK58_RS11215 94a461a5cb6bfee07a73752c08f91032 243 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 25 239 3.1E-56 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 Gene3D G3DSA:3.40.190.10 44 119 6.7E-6 T 22-04-2016 AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 PANTHER PTHR30024:SF14 1 272 1.1E-57 T 22-04-2016 AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 SMART SM00062 22 242 1.7E-6 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 SUPERFAMILY SSF53850 20 237 3.01E-42 T 22-04-2016 AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 PANTHER PTHR30024 1 272 1.1E-57 T 22-04-2016 AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 Gene3D G3DSA:3.40.190.10 120 222 5.0E-22 T 22-04-2016 AMK58_RS01910 0e06aeb142d07f9bb3e5518739d7ee64 310 Pfam PF09084 NMT1/THI5 like 31 237 2.2E-25 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SUPERFAMILY SSF53448 468 515 3.94E-8 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 469 496 6.2E-5 T 22-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 PANTHER PTHR23083 242 329 3.1E-34 T 22-04-2016 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 PANTHER PTHR23083 8 210 3.1E-34 T 22-04-2016 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Gene3D G3DSA:3.40.50.150 742 809 5.4E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Gene3D G3DSA:1.25.40.10 222 326 2.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Gene3D G3DSA:1.25.40.10 4 211 1.9E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Pfam PF13432 Tetratricopeptide repeat 78 135 5.1E-6 T 22-04-2016 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Pfam PF13432 Tetratricopeptide repeat 149 208 0.0088 T 22-04-2016 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 Pfam PF13432 Tetratricopeptide repeat 10 71 3.2E-6 T 22-04-2016 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SUPERFAMILY SSF53335 667 802 4.8E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SUPERFAMILY SSF48452 222 340 1.44E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 72 104 55.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 276 309 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 4 37 58.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 177 210 49.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 38 71 0.48 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 242 275 8.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SMART SM00028 105 138 1.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK58_RS10175 db572b5c93a30ff22614331131cb7408 872 SUPERFAMILY SSF48452 6 210 4.14E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 PANTHER PTHR23519 10 421 3.3E-79 T 22-04-2016 AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 Gene3D G3DSA:1.20.1250.20 20 213 7.1E-11 T 22-04-2016 AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 Gene3D G3DSA:1.20.1250.20 241 425 7.8E-17 T 22-04-2016 AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 SUPERFAMILY SSF103473 23 422 7.06E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 Pfam PF11700 Vacuole effluxer Atg22 like 146 419 1.6E-36 T 22-04-2016 IPR024671 Autophagy-related protein 22-like AMK58_RS02120 01b28c30410c5b5076acf6dcdd87baa2 436 Pfam PF11700 Vacuole effluxer Atg22 like 46 139 8.3E-7 T 22-04-2016 IPR024671 Autophagy-related protein 22-like AMK58_RS00320 78d270ca64a29952c951630bb14746b1 390 Gene3D G3DSA:2.40.160.10 28 372 3.1E-48 T 22-04-2016 IPR023614 Porin domain AMK58_RS00320 78d270ca64a29952c951630bb14746b1 390 SUPERFAMILY SSF56935 21 139 9.77E-33 T 22-04-2016 AMK58_RS00320 78d270ca64a29952c951630bb14746b1 390 SUPERFAMILY SSF56935 168 390 9.77E-33 T 22-04-2016 AMK58_RS00320 78d270ca64a29952c951630bb14746b1 390 Pfam PF13609 Gram-negative porin 10 366 1.4E-55 T 22-04-2016 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 SUPERFAMILY SSF51905 456 493 6.64E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 SUPERFAMILY SSF51905 14 343 6.64E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 Gene3D G3DSA:3.50.50.60 16 102 9.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 Gene3D G3DSA:3.50.50.60 222 316 9.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 PANTHER PTHR10668:SF4 16 492 5.3E-80 T 22-04-2016 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 PANTHER PTHR10668 16 492 5.3E-80 T 22-04-2016 AMK58_RS11145 e329b7d1090a8785ac6da25429e09b57 505 Pfam PF01593 Flavin containing amine oxidoreductase 23 492 1.0E-21 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMK58_RS09625 a98572fe517d3dcd3cd3be5ad4fc509c 675 SUPERFAMILY SSF56112 73 278 1.48E-17 T 22-04-2016 IPR011009 Protein kinase-like domain AMK58_RS09625 a98572fe517d3dcd3cd3be5ad4fc509c 675 SMART SM00220 30 280 2.5E-4 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK58_RS09625 a98572fe517d3dcd3cd3be5ad4fc509c 675 Gene3D G3DSA:1.10.510.10 203 299 7.8E-10 T 22-04-2016 AMK58_RS09625 a98572fe517d3dcd3cd3be5ad4fc509c 675 Gene3D G3DSA:1.10.510.10 96 159 7.1E-5 T 22-04-2016 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 SUPERFAMILY SSF53822 27 369 7.71E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PANTHER PTHR30483:SF20 1 370 7.5E-101 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 Pfam PF13458 Periplasmic binding protein 28 364 1.5E-60 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PANTHER PTHR30483 1 370 7.5E-101 T 22-04-2016 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 Gene3D G3DSA:3.40.50.2300 27 226 3.1E-69 T 22-04-2016 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 90 100 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS00090 ddfed777f7ad8b2d7612ce583b321e8a 370 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 279 292 1.2E-32 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK58_RS11310 c397c70291c2c0bb42feda45975b478e 69 PANTHER PTHR39324:SF1 1 69 3.4E-24 T 22-04-2016 AMK58_RS11310 c397c70291c2c0bb42feda45975b478e 69 PANTHER PTHR39324 1 69 3.4E-24 T 22-04-2016 AMK58_RS11310 c397c70291c2c0bb42feda45975b478e 69 Gene3D G3DSA:3.30.1660.10 2 69 3.5E-34 T 22-04-2016 IPR025543 Dodecin-like AMK58_RS11310 c397c70291c2c0bb42feda45975b478e 69 SUPERFAMILY SSF89807 3 68 2.22E-25 T 22-04-2016 IPR009923 Dodecin AMK58_RS11310 c397c70291c2c0bb42feda45975b478e 69 Pfam PF07311 Dodecin 5 68 1.5E-29 T 22-04-2016 IPR009923 Dodecin AMK58_RS03640 42eb20048049998b29232cc67373a325 156 Pfam PF00210 Ferritin-like domain 12 153 1.1E-7 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK58_RS03640 42eb20048049998b29232cc67373a325 156 Gene3D G3DSA:1.20.1260.10 7 151 5.9E-37 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS03640 42eb20048049998b29232cc67373a325 156 SUPERFAMILY SSF47240 10 153 5.59E-29 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS02640 6c8bfaaaacb25d962577a9463ba7c493 315 PANTHER PTHR36838 1 314 1.8E-41 T 22-04-2016 AMK58_RS02640 6c8bfaaaacb25d962577a9463ba7c493 315 Pfam PF03547 Membrane transport protein 4 143 4.0E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK58_RS02640 6c8bfaaaacb25d962577a9463ba7c493 315 Pfam PF03547 Membrane transport protein 161 307 2.4E-18 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK58_RS25955 b675b8611bdb24025d8fa3ba4c43158b 92 PANTHER PTHR24423:SF382 1 92 7.6E-25 T 22-04-2016 AMK58_RS25955 b675b8611bdb24025d8fa3ba4c43158b 92 Gene3D G3DSA:3.30.565.10 10 92 5.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS25955 b675b8611bdb24025d8fa3ba4c43158b 92 SUPERFAMILY SSF55874 23 92 9.02E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS25955 b675b8611bdb24025d8fa3ba4c43158b 92 PANTHER PTHR24423 1 92 7.6E-25 T 22-04-2016 AMK58_RS03720 4a965c584b35e30e82a9664db8a1b81d 187 SUPERFAMILY SSF55729 6 168 7.55E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS03720 4a965c584b35e30e82a9664db8a1b81d 187 Pfam PF13420 Acetyltransferase (GNAT) domain 7 161 1.6E-23 T 22-04-2016 AMK58_RS03720 4a965c584b35e30e82a9664db8a1b81d 187 PANTHER PTHR23091 6 174 6.0E-34 T 22-04-2016 AMK58_RS03720 4a965c584b35e30e82a9664db8a1b81d 187 Gene3D G3DSA:3.40.630.30 6 171 4.5E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS03720 4a965c584b35e30e82a9664db8a1b81d 187 PANTHER PTHR23091:SF187 6 174 6.0E-34 T 22-04-2016 AMK58_RS07635 a660290a9fa4054d17cdad16a7f9486c 98 PANTHER PTHR12219 2 92 1.9E-31 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMK58_RS07635 a660290a9fa4054d17cdad16a7f9486c 98 Gene3D G3DSA:3.30.160.190 1 77 2.3E-33 T 22-04-2016 AMK58_RS07635 a660290a9fa4054d17cdad16a7f9486c 98 Pfam PF04800 ETC complex I subunit conserved region 2 95 6.3E-36 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMK58_RS05305 8aa9ff8b34c7bd121c3d231817d6fe86 363 Pfam PF10503 Esterase PHB depolymerase 42 279 6.2E-23 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 AMK58_RS05305 8aa9ff8b34c7bd121c3d231817d6fe86 363 Gene3D G3DSA:3.40.50.1820 5 326 1.1E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS05305 8aa9ff8b34c7bd121c3d231817d6fe86 363 SUPERFAMILY SSF53474 5 145 3.4E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS05305 8aa9ff8b34c7bd121c3d231817d6fe86 363 SUPERFAMILY SSF53474 309 329 9.34E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS05305 8aa9ff8b34c7bd121c3d231817d6fe86 363 SUPERFAMILY SSF53474 155 276 9.34E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS07895 73d419b9883dcca8fc8cb61c6fef8307 330 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 321 1.1E-123 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMK58_RS07895 73d419b9883dcca8fc8cb61c6fef8307 330 Pfam PF03741 Integral membrane protein TerC family 83 289 7.8E-57 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 AMK58_RS07895 73d419b9883dcca8fc8cb61c6fef8307 330 PANTHER PTHR30238:SF0 14 323 3.2E-143 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMK58_RS07895 73d419b9883dcca8fc8cb61c6fef8307 330 PANTHER PTHR30238 14 323 3.2E-143 T 22-04-2016 AMK58_RS02840 8b16e60daf8989d3aede4c290fda3af9 143 Pfam PF13358 DDE superfamily endonuclease 6 110 1.1E-16 T 22-04-2016 AMK58_RS10510 c62ac8abf8b7117a20be680e4f5dbe66 152 SUPERFAMILY SSF47188 13 120 3.27E-12 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS10510 c62ac8abf8b7117a20be680e4f5dbe66 152 Gene3D G3DSA:1.20.120.50 13 121 9.0E-11 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AMK58_RS11065 f2c2910f14dba1e209e54772e47a7e6a 132 Gene3D G3DSA:3.10.450.50 4 124 1.7E-6 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS11065 f2c2910f14dba1e209e54772e47a7e6a 132 SUPERFAMILY SSF54427 9 125 5.56E-14 T 22-04-2016 IPR032710 NTF2-like domain AMK58_RS12155 85a365896b6a86386f972434c5edf3be 258 SUPERFAMILY SSF47226 15 116 3.53E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12155 85a365896b6a86386f972434c5edf3be 258 Pfam PF01627 Hpt domain 14 110 8.7E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS12155 85a365896b6a86386f972434c5edf3be 258 SUPERFAMILY SSF52172 138 235 5.98E-12 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS12155 85a365896b6a86386f972434c5edf3be 258 Gene3D G3DSA:3.40.50.2300 137 233 1.4E-9 T 22-04-2016 AMK58_RS12155 85a365896b6a86386f972434c5edf3be 258 Gene3D G3DSA:1.20.120.160 11 117 2.7E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK58_RS08875 e7683513826d089de7e2a06342aee493 350 SUPERFAMILY SSF52172 13 133 7.68E-18 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS08875 e7683513826d089de7e2a06342aee493 350 Pfam PF00072 Response regulator receiver domain 13 125 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS08875 e7683513826d089de7e2a06342aee493 350 Gene3D G3DSA:3.40.50.2300 13 133 6.4E-18 T 22-04-2016 AMK58_RS08875 e7683513826d089de7e2a06342aee493 350 SMART SM00448 9 125 1.3E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS11630 41aa557e57041121594bb2425cfbe338 451 SUPERFAMILY SSF55073 13 130 2.12E-6 T 22-04-2016 IPR029787 Nucleotide cyclase AMK58_RS11630 41aa557e57041121594bb2425cfbe338 451 Gene3D G3DSA:3.30.70.270 13 149 7.4E-8 T 22-04-2016 AMK58_RS04700 c7e33ff0d1a4837cefc30f7883dc6654 278 Pfam PF13289 SIR2-like domain 102 258 5.2E-20 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PIRSF PIRSF036761 2 1618 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 78 1613 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606:SF1 686 1110 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606:SF1 1135 1380 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606:SF1 224 576 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606:SF1 13 152 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 SUPERFAMILY SSF53223 766 953 3.36E-23 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 Gene3D G3DSA:3.40.50.720 1112 1193 1.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 Gene3D G3DSA:3.40.50.720 955 1066 1.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606 686 1110 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606 1135 1380 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606 224 576 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 PANTHER PTHR11606 13 152 0.0 T 22-04-2016 AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 SUPERFAMILY SSF51735 1096 1294 9.19E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS02140 bf9fda0dc9629e7bc88d7bc7bf2e926a 1618 SUPERFAMILY SSF51735 958 1060 9.19E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 SUPERFAMILY SSF55895 31 209 1.96E-40 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 Gene3D G3DSA:3.90.730.10 30 211 3.5E-37 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 PANTHER PTHR11240 7 194 2.8E-24 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 67 74 - T 22-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 108 119 - T 22-04-2016 IPR033130 Ribonuclease T2, His active site 2 AMK58_RS04235 09f5da718a4a3510fac765013dffe65c 217 Pfam PF00445 Ribonuclease T2 family 35 199 1.8E-15 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK58_RS25420 17ebfe643065a6872215cf0d5f0d67db 88 PANTHER PTHR32089:SF40 2 88 1.8E-13 T 22-04-2016 AMK58_RS25420 17ebfe643065a6872215cf0d5f0d67db 88 PANTHER PTHR32089 2 88 1.8E-13 T 22-04-2016 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 6.0E-29 T 22-04-2016 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 PANTHER PTHR23321 1 89 2.1E-44 T 22-04-2016 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.208 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 SMART SM01387 8 88 7.5E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 Pfam PF00312 Ribosomal protein S15 8 88 3.4E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 SUPERFAMILY SSF47060 3 89 2.18E-36 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 Gene3D G3DSA:1.10.287.10 3 89 1.9E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK58_RS00775 913e13a5fc4b4767e280bf4c8f6b35cb 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 4.0E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 Gene3D G3DSA:2.40.50.40 131 198 4.3E-20 T 22-04-2016 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 SUPERFAMILY SSF55785 3 90 4.94E-9 T 22-04-2016 IPR000014 PAS domain AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 PANTHER PTHR37299 131 235 9.9E-18 T 22-04-2016 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 Pfam PF08448 PAS fold 6 106 4.8E-8 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 PANTHER PTHR37299:SF1 131 235 9.9E-18 T 22-04-2016 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 SMART SM00850 138 236 3.3E-28 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 Pfam PF04397 LytTr DNA-binding domain 140 235 4.4E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 AMK58_RS11515 6dc781fb05f63b425219a327eafe918b 237 Gene3D G3DSA:3.30.450.20 3 98 1.0E-9 T 22-04-2016 AMK58_RS11830 affbb03f3204f2971733e474d1285ee4 52 Pfam PF08085 Entericidin EcnA/B family 25 44 1.8E-8 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AMK58_RS05240 bd47b77426e4609b9885224b0e592456 411 Pfam PF04932 O-Antigen ligase 204 345 3.1E-17 T 22-04-2016 IPR007016 O-antigen ligase-related AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 259 1.0E-51 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 Gene3D G3DSA:3.90.800.10 69 189 7.1E-24 T 22-04-2016 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PANTHER PTHR11451:SF41 3 267 1.8E-47 T 22-04-2016 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 Gene3D G3DSA:3.40.50.620 4 68 5.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 Gene3D G3DSA:3.40.50.620 194 243 5.1E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 PANTHER PTHR11451 3 267 1.8E-47 T 22-04-2016 AMK58_RS03580 05a297bb15b4f3fa388316280e440dec 283 SUPERFAMILY SSF52374 4 274 1.47E-82 T 22-04-2016 AMK58_RS08995 54d4f4eeb575a85250a5f28435952bb2 389 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 91 352 2.9E-59 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PANTHER PTHR11938:SF96 141 177 3.1E-99 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PANTHER PTHR11938:SF96 1 123 3.1E-99 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 Gene3D G3DSA:3.30.70.20 63 118 1.7E-20 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 Pfam PF13247 4Fe-4S dicluster domain 52 164 3.5E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PRINTS PR00354 7Fe ferredoxin signature 82 99 2.6E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PRINTS PR00354 7Fe ferredoxin signature 55 65 2.6E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PRINTS PR00354 7Fe ferredoxin signature 65 75 2.6E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PANTHER PTHR11938 141 177 3.1E-99 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 PANTHER PTHR11938 1 123 3.1E-99 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 Gene3D G3DSA:3.30.70.20 3 62 1.9E-22 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 Gene3D G3DSA:3.30.70.20 119 176 1.9E-22 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 SUPERFAMILY SSF54862 1 180 1.88E-49 T 22-04-2016 AMK58_RS04335 2fab8e1ac7ded53a776dc4c7a7a73d56 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PANTHER PTHR20854 1 248 2.1E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 7.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 7.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 7.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 7.1E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 Gene3D G3DSA:3.30.540.10 9 156 1.1E-40 T 22-04-2016 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 Pfam PF00459 Inositol monophosphatase family 15 249 2.8E-49 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 SUPERFAMILY SSF56655 9 253 1.03E-67 T 22-04-2016 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 PANTHER PTHR20854:SF5 1 248 2.1E-61 T 22-04-2016 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 Gene3D G3DSA:3.40.190.80 157 256 9.1E-38 T 22-04-2016 AMK58_RS08905 fc69efb54063a7d70abb5bb2502bb9ad 257 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 255 7.1E-87 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 Pfam PF03030 Inorganic H+ pyrophosphatase 13 691 8.3E-256 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 697 25.092 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 PANTHER PTHR31998 5 700 0.0 T 22-04-2016 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 PANTHER PTHR31998:SF0 5 700 0.0 T 22-04-2016 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 6 698 2.2E-266 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK58_RS08290 ef5b44d63ff6356e1ca9d6ee6684e2eb 700 PIRSF PIRSF001265 1 700 5.0E-244 T 22-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK58_RS01410 b7b77afc2de67da34d489639042c12bd 162 PANTHER PTHR30009 3 125 3.2E-26 T 22-04-2016 AMK58_RS01410 b7b77afc2de67da34d489639042c12bd 162 Pfam PF03918 Cytochrome C biogenesis protein 8 157 1.0E-51 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family AMK58_RS11970 5c2b04fdfe06304cdb080f891b403d17 144 Pfam PF06170 Protein of unknown function (DUF983) 30 114 2.3E-31 T 22-04-2016 IPR009325 Protein of unknown function DUF983 AMK58_RS05330 b83d2d6426f5ffeaf84b24934777c54c 220 SUPERFAMILY SSF52266 3 184 8.55E-7 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS05330 b83d2d6426f5ffeaf84b24934777c54c 220 Gene3D G3DSA:3.40.50.1110 3 215 3.7E-5 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain AMK58_RS03540 817d94d3a2b6eea815a5f159dec65a3e 325 Gene3D G3DSA:3.40.190.10 70 119 1.8E-4 T 22-04-2016 AMK58_RS03540 817d94d3a2b6eea815a5f159dec65a3e 325 Pfam PF09084 NMT1/THI5 like 66 249 1.1E-11 T 22-04-2016 IPR015168 SsuA/THI5-like AMK58_RS03540 817d94d3a2b6eea815a5f159dec65a3e 325 Gene3D G3DSA:3.40.190.10 120 239 8.6E-12 T 22-04-2016 AMK58_RS03540 817d94d3a2b6eea815a5f159dec65a3e 325 PANTHER PTHR30024 1 257 5.2E-19 T 22-04-2016 AMK58_RS03540 817d94d3a2b6eea815a5f159dec65a3e 325 SUPERFAMILY SSF53850 25 253 8.86E-25 T 22-04-2016 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PIRSF PIRSF019574 1 366 4.1E-108 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 4.7E-37 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PANTHER PTHR30222:SF11 1 366 5.8E-112 T 22-04-2016 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 SUPERFAMILY SSF53850 27 365 1.83E-79 T 22-04-2016 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 Pfam PF13416 Bacterial extracellular solute-binding protein 44 331 3.0E-24 T 22-04-2016 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 PANTHER PTHR30222 1 366 5.8E-112 T 22-04-2016 AMK58_RS07855 f503b1f0d656ffe4a195ee88fbfa40aa 366 Gene3D G3DSA:3.40.190.10 134 314 4.0E-59 T 22-04-2016 AMK58_RS16885 40120b934826c2e778da27343764e2d6 285 PANTHER PTHR40940:SF1 48 280 1.5E-21 T 22-04-2016 AMK58_RS16885 40120b934826c2e778da27343764e2d6 285 Pfam PF13584 Oxygen tolerance 5 235 2.5E-27 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD AMK58_RS16885 40120b934826c2e778da27343764e2d6 285 PANTHER PTHR40940 48 280 1.5E-21 T 22-04-2016 AMK58_RS04060 c805bbe1f6650544566802247d57b9fa 71 SUPERFAMILY SSF54913 1 68 8.89E-23 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK58_RS04060 c805bbe1f6650544566802247d57b9fa 71 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 1.6E-19 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 AMK58_RS04060 c805bbe1f6650544566802247d57b9fa 71 Gene3D G3DSA:3.30.70.790 1 68 2.9E-31 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK58_RS10150 bad7549524336f9922bf7747e4d3cfbc 173 PANTHER PTHR35091 5 173 9.2E-27 T 22-04-2016 AMK58_RS10150 bad7549524336f9922bf7747e4d3cfbc 173 Pfam PF03748 Flagellar basal body-associated protein FliL 76 173 7.6E-18 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PIRSF PIRSF002560 1 157 2.0E-68 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 Gene3D G3DSA:1.20.1260.10 2 154 2.6E-60 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.2E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 SUPERFAMILY SSF47240 2 153 2.71E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 TIGRFAM TIGR00754 bfr: bacterioferritin 2 155 1.7E-71 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PANTHER PTHR30295 2 154 6.1E-53 T 22-04-2016 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 Pfam PF00210 Ferritin-like domain 8 144 1.5E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK58_RS11365 12ac538af93d397092939b59b6d07a07 158 PANTHER PTHR30295:SF9 2 154 6.1E-53 T 22-04-2016 AMK58_RS08275 4186b9ec2ee11ad078eae7d9b8487c61 202 Pfam PF02620 Uncharacterized ACR, COG1399 73 199 2.5E-14 T 22-04-2016 IPR003772 Protein of unknown function DUF177 AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 PANTHER PTHR37816:SF1 8 171 2.1E-22 T 22-04-2016 AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 Pfam PF01745 Isopentenyl transferase 11 41 8.7E-5 T 22-04-2016 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 SUPERFAMILY SSF52540 9 121 3.11E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 Gene3D G3DSA:3.40.50.300 20 51 9.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 PANTHER PTHR37816 8 171 2.1E-22 T 22-04-2016 AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 Gene3D G3DSA:3.40.50.300 7 19 3.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS06680 22f4617e98e9e3f1d3b579714fddac81 175 Gene3D G3DSA:3.40.50.300 91 138 3.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS10540 1e94f291315f8b5e6f08d9b76d3dc152 613 Pfam PF02653 Branched-chain amino acid transport system / permease component 334 591 7.3E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS10540 1e94f291315f8b5e6f08d9b76d3dc152 613 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 278 6.9E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS10540 1e94f291315f8b5e6f08d9b76d3dc152 613 PANTHER PTHR11795:SF381 2 353 7.9E-118 T 22-04-2016 AMK58_RS10540 1e94f291315f8b5e6f08d9b76d3dc152 613 PANTHER PTHR11795 2 353 7.9E-118 T 22-04-2016 AMK58_RS05905 ca8d361a4b6cdf0380f57baf672e64bd 363 PANTHER PTHR32196:SF22 2 363 1.5E-82 T 22-04-2016 AMK58_RS05905 ca8d361a4b6cdf0380f57baf672e64bd 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 339 1.7E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS05905 ca8d361a4b6cdf0380f57baf672e64bd 363 PANTHER PTHR32196 2 363 1.5E-82 T 22-04-2016 AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 Gene3D G3DSA:1.10.10.10 3 133 2.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 SUPERFAMILY SSF46785 3 131 1.77E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 PANTHER PTHR33221:SF1 3 147 2.1E-33 T 22-04-2016 AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 PANTHER PTHR33221 3 147 2.1E-33 T 22-04-2016 AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 Pfam PF02082 Transcriptional regulator 3 84 9.0E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS01085 44edeb94139caadbf214535e5055bd0b 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.2E-31 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK58_RS05720 5f117fb53153d2c9196bac72918c68f4 139 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 82 4.3E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK58_RS05720 5f117fb53153d2c9196bac72918c68f4 139 SUPERFAMILY SSF46785 3 99 2.95E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS05720 5f117fb53153d2c9196bac72918c68f4 139 PANTHER PTHR30432 3 113 3.4E-24 T 22-04-2016 AMK58_RS05720 5f117fb53153d2c9196bac72918c68f4 139 Gene3D G3DSA:1.10.10.10 3 111 1.5E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS26245 f49fe9a6a340013577ceef6236f99cb6 121 Gene3D G3DSA:3.90.1260.10 1 119 8.5E-55 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS26245 f49fe9a6a340013577ceef6236f99cb6 121 PANTHER PTHR11587:SF2 1 121 2.8E-66 T 22-04-2016 AMK58_RS26245 f49fe9a6a340013577ceef6236f99cb6 121 Pfam PF00764 Arginosuccinate synthase 1 119 9.4E-47 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK58_RS26245 f49fe9a6a340013577ceef6236f99cb6 121 PANTHER PTHR11587 1 121 2.8E-66 T 22-04-2016 AMK58_RS26245 f49fe9a6a340013577ceef6236f99cb6 121 SUPERFAMILY SSF69864 1 120 1.96E-52 T 22-04-2016 AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 SUPERFAMILY SSF54211 35 160 3.79E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 PANTHER PTHR21569:SF1 28 160 2.5E-68 T 22-04-2016 AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 Pfam PF00380 Ribosomal protein S9/S16 40 160 1.9E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 Gene3D G3DSA:3.30.230.10 34 160 6.2E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 31 160 32.814 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 PANTHER PTHR21569 28 160 2.5E-68 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK58_RS06730 410b12c71e80f7ba3b4b0937072b0f13 160 ProSitePatterns PS00360 Ribosomal protein S9 signature. 99 117 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMK58_RS10910 a7b9fe80dda281a9ce2ec287b5f7b39d 621 SUPERFAMILY SSF64518 302 379 6.93E-13 T 22-04-2016 AMK58_RS10910 a7b9fe80dda281a9ce2ec287b5f7b39d 621 SUPERFAMILY SSF64518 442 621 6.93E-13 T 22-04-2016 AMK58_RS10910 a7b9fe80dda281a9ce2ec287b5f7b39d 621 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 146 3.4E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK58_RS10910 a7b9fe80dda281a9ce2ec287b5f7b39d 621 SUPERFAMILY SSF64518 6 331 9.68E-23 T 22-04-2016 AMK58_RS02220 1f47bdc24c15871cb34053496f78dd64 75 Pfam PF06568 Domain of unknown function (DUF1127) 30 61 2.6E-12 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 SUPERFAMILY SSF51905 2 183 3.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 SUPERFAMILY SSF51905 285 384 3.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.3E-9 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 9.3E-9 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.3E-9 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 PANTHER PTHR10617 1 415 7.0E-140 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 Gene3D G3DSA:3.50.50.60 3 167 1.1E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 Gene3D G3DSA:3.30.9.10 168 340 1.4E-15 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 PANTHER PTHR10617:SF98 1 415 7.0E-140 T 22-04-2016 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 Pfam PF01494 FAD binding domain 5 192 2.6E-7 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 AMK58_RS04555 6421b648c2ec4e0cbf3e9a491e8d976e 433 SUPERFAMILY SSF54373 182 285 1.18E-23 T 22-04-2016 AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 SUPERFAMILY SSF110111 62 185 8.76E-52 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 PANTHER PTHR21320 4 189 3.5E-77 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 Gene3D G3DSA:2.60.370.10 63 192 5.3E-57 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 36 181 2.5E-59 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 PANTHER PTHR21320:SF3 4 189 3.5E-77 T 22-04-2016 AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 PIRSF PIRSF005413 3 198 3.3E-75 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK58_RS09525 c523bdce984a895518b3d4c2401ee6dc 207 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 187 40.539 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK58_RS06040 26d592557f8b6fec581271eb2687c0ac 151 Gene3D G3DSA:3.10.129.10 2 146 2.6E-43 T 22-04-2016 IPR029069 HotDog domain AMK58_RS06040 26d592557f8b6fec581271eb2687c0ac 151 PANTHER PTHR13078 1 148 1.8E-32 T 22-04-2016 AMK58_RS06040 26d592557f8b6fec581271eb2687c0ac 151 Pfam PF01575 MaoC like domain 11 122 9.6E-21 T 22-04-2016 IPR002539 MaoC-like domain AMK58_RS06040 26d592557f8b6fec581271eb2687c0ac 151 SUPERFAMILY SSF54637 2 146 5.1E-37 T 22-04-2016 IPR029069 HotDog domain AMK58_RS27045 70b797517e6762c7b04f56f73287206a 280 PANTHER PTHR30349:SF16 2 267 8.8E-62 T 22-04-2016 AMK58_RS27045 70b797517e6762c7b04f56f73287206a 280 PANTHER PTHR30349 2 267 8.8E-62 T 22-04-2016 AMK58_RS27045 70b797517e6762c7b04f56f73287206a 280 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 34 270 2.9E-49 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS27045 70b797517e6762c7b04f56f73287206a 280 PIRSF PIRSF017082 1 279 5.7E-84 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 Gene3D G3DSA:3.40.50.970 65 233 3.9E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 65 232 1.2E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 PANTHER PTHR18968:SF138 43 320 2.0E-102 T 22-04-2016 AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 Gene3D G3DSA:3.40.50.1220 248 318 6.6E-22 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 PANTHER PTHR18968 43 320 2.0E-102 T 22-04-2016 AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 256 318 1.7E-17 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 SUPERFAMILY SSF52467 250 317 3.51E-20 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK58_RS20570 add82a651973301d5b52887b10a8958f 320 SUPERFAMILY SSF52518 64 234 3.04E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK58_RS00635 68c9c4229a5ba953087185f7a84c5f0c 259 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 37 258 3.5E-85 T 22-04-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AMK58_RS00205 032c48f1f9c6795149d2337a5bd971ca 424 PANTHER PTHR12526 116 403 5.3E-39 T 22-04-2016 AMK58_RS00205 032c48f1f9c6795149d2337a5bd971ca 424 PANTHER PTHR12526 62 81 5.3E-39 T 22-04-2016 AMK58_RS00205 032c48f1f9c6795149d2337a5bd971ca 424 Gene3D G3DSA:3.40.50.2000 220 383 2.8E-22 T 22-04-2016 AMK58_RS00205 032c48f1f9c6795149d2337a5bd971ca 424 SUPERFAMILY SSF53756 15 401 1.62E-60 T 22-04-2016 AMK58_RS00205 032c48f1f9c6795149d2337a5bd971ca 424 Pfam PF00534 Glycosyl transferases group 1 223 383 4.7E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK58_RS12815 2e950c04d5c76d7b45a99a24132dcb17 202 Pfam PF13489 Methyltransferase domain 20 129 1.4E-6 T 22-04-2016 AMK58_RS12815 2e950c04d5c76d7b45a99a24132dcb17 202 SUPERFAMILY SSF53335 15 175 1.42E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS12815 2e950c04d5c76d7b45a99a24132dcb17 202 Gene3D G3DSA:3.40.50.150 18 176 4.8E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 120 2.7E-41 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 Gene3D G3DSA:3.30.420.100 25 120 2.0E-41 T 22-04-2016 AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 SUPERFAMILY SSF53137 5 118 9.16E-55 T 22-04-2016 AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 120 7.0E-44 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 PANTHER PTHR12899 9 120 9.3E-45 T 22-04-2016 AMK58_RS10325 053d60105674da1927c92c43de05dcfd 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 29.22 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS01755 8c2958ade36a0828cbe47f238730c740 219 Pfam PF11726 Protein of unknown function (DUF3296) 16 180 3.4E-15 T 22-04-2016 IPR021723 Inovirus Gp2 AMK58_RS11130 7ad488c1d64384cd8cddcf725624f71a 159 Pfam PF03923 Uncharacterized lipoprotein 9 117 1.3E-4 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG AMK58_RS02455 91ce07c57ca18ff7d87b6bbb30198dd7 363 Gene3D G3DSA:2.40.128.140 56 361 9.2E-93 T 22-04-2016 AMK58_RS02455 91ce07c57ca18ff7d87b6bbb30198dd7 363 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 62 362 1.0E-95 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 AMK58_RS08850 f4585a6657c2431bc50166a7e86d704f 227 SUPERFAMILY SSF56436 35 204 2.95E-33 T 22-04-2016 IPR016187 C-type lectin fold AMK58_RS08850 f4585a6657c2431bc50166a7e86d704f 227 Gene3D G3DSA:3.10.100.10 36 226 4.0E-37 T 22-04-2016 IPR016186 C-type lectin-like AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 SUPERFAMILY SSF47384 139 215 1.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 PANTHER PTHR24423 145 377 6.5E-71 T 22-04-2016 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 214 2.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 Gene3D G3DSA:1.10.287.130 142 200 1.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 SMART SM00387 261 374 7.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 SMART SM00388 146 215 1.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 6.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 371 6.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 6.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 6.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 SUPERFAMILY SSF55874 205 371 6.68E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 372 2.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS03735 aed4aa514cf4b3515b30bbfbfc73752b 389 Gene3D G3DSA:3.30.565.10 201 371 7.7E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 PANTHER PTHR24031:SF261 1 451 2.6E-170 T 22-04-2016 AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 PANTHER PTHR24031 1 451 2.6E-170 T 22-04-2016 AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 Pfam PF00270 DEAD/DEAH box helicase 20 187 3.9E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 SMART SM00487 15 215 1.5E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 Gene3D G3DSA:3.40.50.300 1 209 7.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 SMART SM00490 252 333 3.8E-33 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 SUPERFAMILY SSF52540 69 355 7.71E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 Gene3D G3DSA:3.40.50.300 210 362 2.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 Pfam PF00271 Helicase conserved C-terminal domain 237 333 1.7E-27 T 22-04-2016 IPR001650 Helicase, C-terminal AMK58_RS12870 625e347f61a33922d44d987a14d32665 465 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 147 155 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMK58_RS12150 971b88d26b80d086b9a8c982555ecf5f 181 Gene3D G3DSA:1.20.1280.20 104 181 3.7E-33 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 AMK58_RS12150 971b88d26b80d086b9a8c982555ecf5f 181 SUPERFAMILY SSF46785 13 180 1.97E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS12150 971b88d26b80d086b9a8c982555ecf5f 181 Pfam PF14557 Putative AphA-like transcriptional regulator 2 177 6.9E-79 T 22-04-2016 IPR029434 Putative transcriptional regulator AMK58_RS12150 971b88d26b80d086b9a8c982555ecf5f 181 Gene3D G3DSA:1.10.10.10 1 100 9.2E-48 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS04460 4a6eef5370320232f68010396478ee8f 126 SUPERFAMILY SSF51182 31 110 1.5E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS04460 4a6eef5370320232f68010396478ee8f 126 Pfam PF07883 Cupin domain 53 109 1.4E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS04460 4a6eef5370320232f68010396478ee8f 126 Gene3D G3DSA:2.60.120.10 20 111 1.4E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS10635 827d1af2f4a23ccd842af6da118cbb53 443 Gene3D G3DSA:3.20.20.120 167 412 6.2E-13 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS10635 827d1af2f4a23ccd842af6da118cbb53 443 SUPERFAMILY SSF51604 174 344 4.52E-12 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK58_RS11450 0b8f5b5eb3284bb08dca7ba6c077b922 391 SUPERFAMILY SSF103473 6 386 3.14E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK58_RS11450 0b8f5b5eb3284bb08dca7ba6c077b922 391 Pfam PF07690 Major Facilitator Superfamily 18 352 1.4E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK58_RS11450 0b8f5b5eb3284bb08dca7ba6c077b922 391 PANTHER PTHR11360:SF126 1 391 1.7E-42 T 22-04-2016 AMK58_RS11450 0b8f5b5eb3284bb08dca7ba6c077b922 391 PANTHER PTHR11360 1 391 1.7E-42 T 22-04-2016 AMK58_RS11450 0b8f5b5eb3284bb08dca7ba6c077b922 391 Gene3D G3DSA:1.20.1250.20 6 183 3.5E-12 T 22-04-2016 AMK58_RS13605 cdddbbc2617ada692ec09efe20525215 217 Pfam PF03923 Uncharacterized lipoprotein 38 196 3.6E-22 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG AMK58_RS12060 b7c20debf162ac04e8461e09805dde90 140 PANTHER PTHR35519 26 140 1.7E-22 T 22-04-2016 AMK58_RS12060 b7c20debf162ac04e8461e09805dde90 140 Pfam PF13430 Domain of unknown function (DUF4112) 31 133 1.4E-30 T 22-04-2016 IPR025187 Protein of unknown function DUF4112 AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 PANTHER PTHR12919 2 115 2.0E-43 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 Gene3D G3DSA:3.30.1320.10 3 83 2.8E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 Pfam PF00886 Ribosomal protein S16 9 70 2.3E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 SUPERFAMILY SSF54565 3 96 5.23E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 3.5E-31 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS12255 6be58a65683e9f6f0276f1ed2dcc89d8 117 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.824 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK58_RS01185 5d87333edacaf20e224b7697f6f4ac11 145 SMART SM00363 23 86 5.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS01185 5d87333edacaf20e224b7697f6f4ac11 145 Gene3D G3DSA:3.10.290.10 22 111 1.1E-31 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS01185 5d87333edacaf20e224b7697f6f4ac11 145 SUPERFAMILY SSF55174 22 107 1.83E-23 T 22-04-2016 AMK58_RS01185 5d87333edacaf20e224b7697f6f4ac11 145 Pfam PF01479 S4 domain 24 70 2.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK58_RS01230 dfb19545fa25b7d24d9ba58b484ec006 278 Gene3D G3DSA:2.40.50.90 23 151 4.1E-19 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS01230 dfb19545fa25b7d24d9ba58b484ec006 278 SMART SM00318 21 151 2.3E-5 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS01230 dfb19545fa25b7d24d9ba58b484ec006 278 Pfam PF00565 Staphylococcal nuclease homologue 45 150 4.8E-9 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS01230 dfb19545fa25b7d24d9ba58b484ec006 278 SUPERFAMILY SSF50199 26 151 4.32E-21 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK58_RS12355 d36f36f103877fe47e4c0780c3fec9d5 63 Pfam PF11127 Protein of unknown function (DUF2892) 1 60 3.9E-24 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 AMK58_RS02150 7b55a6b05b7f1157715917e6018fa7e2 323 PANTHER PTHR30349:SF16 1 281 2.9E-63 T 22-04-2016 AMK58_RS02150 7b55a6b05b7f1157715917e6018fa7e2 323 PANTHER PTHR30349 1 281 2.9E-63 T 22-04-2016 AMK58_RS02150 7b55a6b05b7f1157715917e6018fa7e2 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 287 2.9E-49 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS02150 7b55a6b05b7f1157715917e6018fa7e2 323 PIRSF PIRSF017082 1 323 1.7E-90 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK58_RS04375 096c8ac320ae9edf4920d530d05197a6 159 Pfam PF00430 ATP synthase B/B' CF(0) 7 134 2.9E-26 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS04375 096c8ac320ae9edf4920d530d05197a6 159 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 154 11.305 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK58_RS03695 ab9605ff045e6a071ce2a80f454edaac 316 SUPERFAMILY SSF53187 7 313 1.35E-51 T 22-04-2016 AMK58_RS03695 ab9605ff045e6a071ce2a80f454edaac 316 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 36 305 1.9E-13 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AMK58_RS03695 ab9605ff045e6a071ce2a80f454edaac 316 Gene3D G3DSA:3.40.630.10 29 220 2.4E-7 T 22-04-2016 AMK58_RS10855 31adfc61011ea992b78cfab42aaf259f 302 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 23 300 3.3E-56 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMK58_RS10855 31adfc61011ea992b78cfab42aaf259f 302 PIRSF PIRSF026649 13 302 2.5E-61 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMK58_RS10855 31adfc61011ea992b78cfab42aaf259f 302 PANTHER PTHR30606 4 300 3.0E-67 T 22-04-2016 AMK58_RS13380 9ae1725a0e60505be4c588e0bb11a59e 132 SUPERFAMILY SSF48295 11 62 1.41E-10 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK58_RS13380 9ae1725a0e60505be4c588e0bb11a59e 132 PANTHER PTHR37936 5 132 9.4E-19 T 22-04-2016 AMK58_RS13380 9ae1725a0e60505be4c588e0bb11a59e 132 Pfam PF01527 Transposase 13 79 5.6E-17 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK58_RS13380 9ae1725a0e60505be4c588e0bb11a59e 132 Gene3D G3DSA:1.10.10.10 12 61 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK58_RS02730 0eaab3b1ba7ff350fc00b4c70ea97570 271 Pfam PF12236 Bacteriophage head to tail connecting protein 38 271 1.4E-66 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type AMK58_RS00930 e12a2409e82bb8f57b7bbd15d627f783 179 Pfam PF07987 Domain of unkown function (DUF1775) 30 175 1.5E-49 T 22-04-2016 IPR012533 GLE1, N-terminal, bacteria AMK58_RS12575 c0c51c6616a5c27eded4fda662bfdff9 170 Pfam PF06776 Invasion associated locus B (IalB) protein 38 165 3.1E-6 T 22-04-2016 IPR010642 Invasion protein B AMK58_RS06475 82d69752d951c10e9f304d22de35ae71 95 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 12 93 1.3E-13 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 AMK58_RS06475 82d69752d951c10e9f304d22de35ae71 95 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 93 3.4E-10 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 AMK58_RS06600 fc980b93f089c991b6e9bddba629b202 232 PANTHER PTHR38050 2 128 2.9E-14 T 22-04-2016 AMK58_RS06600 fc980b93f089c991b6e9bddba629b202 232 SUPERFAMILY SSF53474 4 167 2.32E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS06600 fc980b93f089c991b6e9bddba629b202 232 Gene3D G3DSA:3.40.50.1820 3 165 1.8E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS02875 b884e21e0ed3b0f74636049ef85611e6 122 PANTHER PTHR34310 4 117 2.1E-50 T 22-04-2016 AMK58_RS02875 b884e21e0ed3b0f74636049ef85611e6 122 Pfam PF04248 Domain of unknown function (DUF427) 19 111 4.3E-32 T 22-04-2016 IPR007361 Domain of unknown function DUF427 AMK58_RS02875 b884e21e0ed3b0f74636049ef85611e6 122 PANTHER PTHR34310:SF3 4 117 2.1E-50 T 22-04-2016 AMK58_RS02985 bf211f954f831eb9f5b3b0be6b04f261 676 SUPERFAMILY SSF51126 186 369 4.44E-23 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor AMK58_RS02985 bf211f954f831eb9f5b3b0be6b04f261 676 Gene3D G3DSA:2.160.20.10 186 251 2.0E-16 T 22-04-2016 IPR012334 Pectin lyase fold AMK58_RS02985 bf211f954f831eb9f5b3b0be6b04f261 676 Pfam PF12708 Pectate lyase superfamily protein 189 266 8.0E-16 T 22-04-2016 IPR024535 Pectate lyase superfamily protein AMK58_RS08575 8ee55a03739e909ad47382aa98ee3785 259 Gene3D G3DSA:3.90.226.10 5 257 2.9E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS08575 8ee55a03739e909ad47382aa98ee3785 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 257 3.3E-54 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK58_RS08575 8ee55a03739e909ad47382aa98ee3785 259 PANTHER PTHR11941 1 259 3.0E-77 T 22-04-2016 AMK58_RS08575 8ee55a03739e909ad47382aa98ee3785 259 SUPERFAMILY SSF52096 6 258 3.78E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 SUPERFAMILY SSF52540 12 239 2.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 PANTHER PTHR24220 13 257 1.3E-112 T 22-04-2016 AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 PANTHER PTHR24220:SF567 13 257 1.3E-112 T 22-04-2016 AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 SMART SM00382 36 226 2.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 Pfam PF00005 ABC transporter 27 176 8.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS07355 7a1e189e15a4e432d7af2a4478cefed8 263 Gene3D G3DSA:3.40.50.300 11 247 3.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00560 db0f3e6a84c43a176c398e5e9cc710f9 261 PANTHER PTHR30296:SF0 9 252 1.5E-104 T 22-04-2016 AMK58_RS00560 db0f3e6a84c43a176c398e5e9cc710f9 261 Pfam PF02754 Cysteine-rich domain 10 91 8.5E-13 T 22-04-2016 IPR004017 Cysteine-rich domain AMK58_RS00560 db0f3e6a84c43a176c398e5e9cc710f9 261 Pfam PF02754 Cysteine-rich domain 139 223 1.3E-11 T 22-04-2016 IPR004017 Cysteine-rich domain AMK58_RS00560 db0f3e6a84c43a176c398e5e9cc710f9 261 PANTHER PTHR30296 9 252 1.5E-104 T 22-04-2016 AMK58_RS09375 c66cf568d8db6c3fdd9ce37149343afc 448 PANTHER PTHR35093:SF2 5 448 1.0E-98 T 22-04-2016 AMK58_RS09375 c66cf568d8db6c3fdd9ce37149343afc 448 Gene3D G3DSA:2.40.160.60 28 448 3.5E-116 T 22-04-2016 AMK58_RS09375 c66cf568d8db6c3fdd9ce37149343afc 448 SUPERFAMILY SSF56935 28 444 1.24E-85 T 22-04-2016 AMK58_RS09375 c66cf568d8db6c3fdd9ce37149343afc 448 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 25 448 3.5E-103 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMK58_RS09375 c66cf568d8db6c3fdd9ce37149343afc 448 PANTHER PTHR35093 5 448 1.0E-98 T 22-04-2016 AMK58_RS08790 1a201d90addf65aa275f46ea2606332b 170 Pfam PF00805 Pentapeptide repeats (8 copies) 41 75 9.0E-6 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08790 1a201d90addf65aa275f46ea2606332b 170 Pfam PF00805 Pentapeptide repeats (8 copies) 112 151 8.0E-13 T 22-04-2016 IPR001646 Pentapeptide repeat AMK58_RS08790 1a201d90addf65aa275f46ea2606332b 170 SUPERFAMILY SSF141571 37 155 1.31E-34 T 22-04-2016 AMK58_RS08790 1a201d90addf65aa275f46ea2606332b 170 PANTHER PTHR14136 37 156 1.3E-26 T 22-04-2016 AMK58_RS07465 3a58dabcf419e377c51c380ff1b6ccc2 282 PANTHER PTHR12905 3 237 6.9E-28 T 22-04-2016 AMK58_RS07465 3a58dabcf419e377c51c380ff1b6ccc2 282 Pfam PF00149 Calcineurin-like phosphoesterase 3 192 9.9E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK58_RS07465 3a58dabcf419e377c51c380ff1b6ccc2 282 SUPERFAMILY SSF56300 3 243 1.63E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS07465 3a58dabcf419e377c51c380ff1b6ccc2 282 PANTHER PTHR12905:SF17 3 237 6.9E-28 T 22-04-2016 AMK58_RS07465 3a58dabcf419e377c51c380ff1b6ccc2 282 Gene3D G3DSA:3.60.21.10 3 243 4.3E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS12865 cbd3b69c4e850b7700148878a027f720 335 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 334 63.439 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK58_RS12865 cbd3b69c4e850b7700148878a027f720 335 PANTHER PTHR34308 12 335 1.4E-57 T 22-04-2016 AMK58_RS12865 cbd3b69c4e850b7700148878a027f720 335 Pfam PF03186 CobD/Cbib protein 24 313 6.8E-64 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK58_RS12865 cbd3b69c4e850b7700148878a027f720 335 PANTHER PTHR34308:SF1 12 335 1.4E-57 T 22-04-2016 AMK58_RS01430 632283737c5b60b617f4d05359363796 72 Pfam PF04995 Heme exporter protein D (CcmD) 8 47 8.8E-13 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMK58_RS01430 632283737c5b60b617f4d05359363796 72 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 47 1.5E-13 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMK58_RS07210 cbc86cfa3617739df12b6fa41ec41996 269 Gene3D G3DSA:1.10.10.60 25 61 4.2E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS00225 e990955c54376926771392419efb5f67 385 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 276 351 7.0E-10 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS00225 e990955c54376926771392419efb5f67 385 Gene3D G3DSA:3.40.50.2000 186 352 2.0E-20 T 22-04-2016 AMK58_RS00225 e990955c54376926771392419efb5f67 385 SUPERFAMILY SSF53756 1 353 1.05E-18 T 22-04-2016 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 PANTHER PTHR11825 11 278 6.8E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 Gene3D G3DSA:3.30.470.10 10 124 5.8E-19 T 22-04-2016 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 ProSitePatterns PS00770 Aminotransferases class-IV signature. 184 213 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 Pfam PF01063 Amino-transferase class IV 37 258 5.6E-40 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 Gene3D G3DSA:3.20.10.10 128 279 2.7E-42 T 22-04-2016 AMK58_RS02695 da5299fee52cd0800e5a3923ace4c52c 282 SUPERFAMILY SSF56752 10 280 6.54E-71 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK58_RS00355 cc1f582c00ff7fd44b9d4d65cad0d9e6 268 PANTHER PTHR13696 12 265 1.5E-89 T 22-04-2016 AMK58_RS00355 cc1f582c00ff7fd44b9d4d65cad0d9e6 268 PANTHER PTHR13696:SF52 12 265 1.5E-89 T 22-04-2016 AMK58_RS00355 cc1f582c00ff7fd44b9d4d65cad0d9e6 268 Gene3D G3DSA:3.40.50.300 13 264 1.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS00355 cc1f582c00ff7fd44b9d4d65cad0d9e6 268 Pfam PF13614 AAA domain 13 188 8.3E-63 T 22-04-2016 IPR025669 AAA domain AMK58_RS00355 cc1f582c00ff7fd44b9d4d65cad0d9e6 268 SUPERFAMILY SSF52540 12 264 1.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11425 8019951d687a3d7e220fc9f0fcb9ed0a 259 Pfam PF05742 Transport and Golgi organisation 2 1 157 9.3E-25 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 AMK58_RS11425 8019951d687a3d7e220fc9f0fcb9ed0a 259 PANTHER PTHR17985 2 157 1.5E-27 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 AMK58_RS11755 d89b314a01ec3ccdb427daa1bedc67a8 272 SUPERFAMILY SSF47240 4 255 9.42E-46 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS11755 d89b314a01ec3ccdb427daa1bedc67a8 272 Gene3D G3DSA:1.10.620.20 10 219 8.4E-22 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AMK58_RS06490 89d7c6619c3cd1856d32bad6be00f88e 26 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 4 24 1.5E-7 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 AMK58_RS06490 89d7c6619c3cd1856d32bad6be00f88e 26 Pfam PF08042 PqqA family 3 21 3.2E-8 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 AMK58_RS04800 a5022a5734ce3bba546dff85697920dd 320 SUPERFAMILY SSF53335 83 318 1.69E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04800 a5022a5734ce3bba546dff85697920dd 320 Gene3D G3DSA:3.40.50.150 92 261 6.7E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS04800 a5022a5734ce3bba546dff85697920dd 320 Pfam PF13489 Methyltransferase domain 101 252 2.0E-6 T 22-04-2016 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 PANTHER PTHR22769:SF17 24 194 2.5E-65 T 22-04-2016 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 Gene3D G3DSA:2.20.70.10 23 44 5.1E-7 T 22-04-2016 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 SUPERFAMILY SSF55811 23 171 4.2E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 Pfam PF14803 Nudix N-terminal 22 44 3.8E-7 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- AMK58_RS12170 6783732187a3404737be33c962b78d18 194 Gene3D G3DSA:3.90.79.10 45 189 1.8E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 Pfam PF00293 NUDIX domain 53 155 3.2E-10 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS12170 6783732187a3404737be33c962b78d18 194 PANTHER PTHR22769 24 194 2.5E-65 T 22-04-2016 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 PANTHER PTHR34040 1 89 2.4E-20 T 22-04-2016 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.6E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 PANTHER PTHR34040:SF2 1 89 2.4E-20 T 22-04-2016 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.7E-14 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.7E-14 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS10065 6d3df1c285078c608c1927358b338418 106 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.7E-14 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK58_RS05825 d722cd3879d54d1a9aaf960e88934c99 192 Pfam PF09335 SNARE associated Golgi protein 52 153 1.1E-10 T 22-04-2016 IPR032816 SNARE associated Golgi protein AMK58_RS05020 f986df44ba9b41cfc21a4115389332ef 147 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 144 1.8E-24 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G AMK58_RS05020 f986df44ba9b41cfc21a4115389332ef 147 PANTHER PTHR38588 2 144 3.2E-25 T 22-04-2016 AMK58_RS05020 f986df44ba9b41cfc21a4115389332ef 147 SUPERFAMILY SSF55961 1 144 3.3E-32 T 22-04-2016 AMK58_RS05020 f986df44ba9b41cfc21a4115389332ef 147 Gene3D G3DSA:3.30.530.20 1 144 3.8E-41 T 22-04-2016 IPR023393 START-like domain AMK58_RS05020 f986df44ba9b41cfc21a4115389332ef 147 PANTHER PTHR38588:SF1 2 144 3.2E-25 T 22-04-2016 AMK58_RS01705 e104677437d4d52050316f093b054b63 219 Gene3D G3DSA:3.40.630.30 5 130 6.2E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS01705 e104677437d4d52050316f093b054b63 219 SUPERFAMILY SSF55729 1 130 6.85E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK58_RS01705 e104677437d4d52050316f093b054b63 219 Pfam PF00583 Acetyltransferase (GNAT) family 55 128 1.8E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK58_RS20810 c966d9c227eb1e6e2fe70e13d2781de7 118 Pfam PF00535 Glycosyl transferase family 2 40 113 4.0E-5 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK58_RS20810 c966d9c227eb1e6e2fe70e13d2781de7 118 SUPERFAMILY SSF53448 37 112 3.04E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS20810 c966d9c227eb1e6e2fe70e13d2781de7 118 Gene3D G3DSA:3.90.550.10 39 112 2.8E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 Pfam PF13437 HlyD family secretion protein 305 414 4.6E-12 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 Pfam PF13533 Biotin-lipoyl like 82 114 1.0E-8 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PANTHER PTHR30386 164 452 1.5E-68 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PANTHER PTHR30386 1 126 1.5E-68 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 41 64 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 83 103 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 432 452 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 432 3.1E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 35 450 3.5E-86 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PANTHER PTHR30386:SF3 164 452 1.5E-68 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 PANTHER PTHR30386:SF3 1 126 1.5E-68 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 Gene3D G3DSA:2.40.50.100 76 105 9.7E-12 T 22-04-2016 AMK58_RS06540 ae0b9d6b9e71cefb205f5a1e6c5132c4 453 Gene3D G3DSA:2.40.50.100 302 336 9.7E-12 T 22-04-2016 AMK58_RS11080 88e3963bdf5561c28098998c527a3e02 257 Gene3D G3DSA:1.10.3720.10 53 244 2.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11080 88e3963bdf5561c28098998c527a3e02 257 PANTHER PTHR30151 1 257 2.0E-64 T 22-04-2016 AMK58_RS11080 88e3963bdf5561c28098998c527a3e02 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 244 1.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS11080 88e3963bdf5561c28098998c527a3e02 257 SUPERFAMILY SSF161098 52 233 3.27E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 SUPERFAMILY SSF103088 186 289 2.09E-29 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 Pfam PF00691 OmpA family 191 284 1.9E-19 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 ProSitePatterns PS01068 OmpA-like domain. 224 269 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 PRINTS PR01021 OMPA domain signature 222 237 4.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 PRINTS PR01021 OMPA domain signature 237 253 4.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 PRINTS PR01021 OMPA domain signature 192 214 4.4E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 PANTHER PTHR30128 190 288 9.6E-29 T 22-04-2016 AMK58_RS08970 b72e1409edaaf24dca04a0ebd1545dc6 292 Gene3D G3DSA:3.30.1330.60 189 289 5.8E-30 T 22-04-2016 IPR006665 OmpA-like domain AMK58_RS01385 4866bc2100b04ce28e479af8e82b9ee2 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 126 1.4E-11 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK58_RS01385 4866bc2100b04ce28e479af8e82b9ee2 144 PANTHER PTHR36503:SF1 2 143 1.4E-60 T 22-04-2016 AMK58_RS01385 4866bc2100b04ce28e479af8e82b9ee2 144 SUPERFAMILY SSF54593 4 132 2.61E-31 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS01385 4866bc2100b04ce28e479af8e82b9ee2 144 Gene3D G3DSA:3.10.180.10 1 142 4.7E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK58_RS01385 4866bc2100b04ce28e479af8e82b9ee2 144 PANTHER PTHR36503 2 143 1.4E-60 T 22-04-2016 AMK58_RS07305 38e7b13c1d521001613de43299879fae 95 Gene3D G3DSA:3.30.70.20 40 91 1.7E-10 T 22-04-2016 AMK58_RS07305 38e7b13c1d521001613de43299879fae 95 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 73 84 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK58_RS07305 38e7b13c1d521001613de43299879fae 95 SUPERFAMILY SSF54862 20 91 1.35E-12 T 22-04-2016 AMK58_RS07305 38e7b13c1d521001613de43299879fae 95 Pfam PF12838 4Fe-4S dicluster domain 41 87 2.6E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 SUPERFAMILY SSF52833 1 85 2.93E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 7.2E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 Gene3D G3DSA:3.40.30.10 1 89 1.0E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 SUPERFAMILY SSF47616 81 198 2.78E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 Gene3D G3DSA:1.20.1050.10 90 188 3.0E-41 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 PANTHER PTHR11260:SF154 1 201 2.7E-95 T 22-04-2016 AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 189 2.2E-16 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal AMK58_RS02275 8ba20c4f459a26c84375dca62d849761 201 PANTHER PTHR11260 1 201 2.7E-95 T 22-04-2016 AMK58_RS03280 5edcbe7e09225eea351a6986f9fc7d04 79 Pfam PF13773 Domain of unknown function (DUF4170) 4 71 1.3E-34 T 22-04-2016 IPR025226 Protein of unknown function DUF4170 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PANTHER PTHR24423:SF468 296 547 1.2E-34 T 22-04-2016 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PANTHER PTHR24423:SF468 3 13 1.2E-34 T 22-04-2016 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 Pfam PF02743 Cache domain 60 235 1.1E-13 T 22-04-2016 IPR033479 Double Cache domain 1 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 Pfam PF07568 Histidine kinase 352 425 6.7E-24 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 SUPERFAMILY SSF55874 412 547 1.63E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 Gene3D G3DSA:3.30.565.10 406 548 1.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 SMART SM00387 446 550 4.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PANTHER PTHR24423 296 547 1.2E-34 T 22-04-2016 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PANTHER PTHR24423 3 13 1.2E-34 T 22-04-2016 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 Gene3D G3DSA:3.30.450.20 109 196 3.6E-11 T 22-04-2016 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 547 2.4E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 501 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS12785 eaa8788df7b6e1fe31815605486a816b 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 7.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK58_RS11875 04caa907c528874fd8d264d4e4d1f506 360 SUPERFAMILY SSF53335 153 345 5.68E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS11875 04caa907c528874fd8d264d4e4d1f506 360 Pfam PF13649 Methyltransferase domain 195 290 5.1E-18 T 22-04-2016 AMK58_RS11875 04caa907c528874fd8d264d4e4d1f506 360 PANTHER PTHR10108 149 343 5.7E-35 T 22-04-2016 AMK58_RS11875 04caa907c528874fd8d264d4e4d1f506 360 PANTHER PTHR10108:SF830 149 343 5.7E-35 T 22-04-2016 AMK58_RS11875 04caa907c528874fd8d264d4e4d1f506 360 Gene3D G3DSA:3.40.50.150 151 339 7.7E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS06020 fdfb82e1e9d7ed9de6656d938c5d53a7 430 Pfam PF10011 Predicted membrane protein (DUF2254) 13 377 2.7E-103 T 22-04-2016 IPR018723 Protein of unknown function DUF2254, membrane AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 SUPERFAMILY SSF111331 11 228 8.37E-52 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 PANTHER PTHR20275 1 237 3.8E-97 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 Gene3D G3DSA:2.60.200.30 98 213 8.8E-28 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 PANTHER PTHR20275:SF7 1 237 3.8E-97 T 22-04-2016 AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 Gene3D G3DSA:3.40.50.10330 14 97 2.3E-14 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK58_RS03705 afa243785850cf8423215c4335994e5b 243 Pfam PF01513 ATP-NAD kinase 17 204 2.3E-15 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK58_RS03620 a7858adf8853d0c76f1b7c6922cd609b 175 Gene3D G3DSA:3.40.50.450 3 142 4.9E-25 T 22-04-2016 AMK58_RS03620 a7858adf8853d0c76f1b7c6922cd609b 175 SUPERFAMILY SSF102405 3 144 9.16E-23 T 22-04-2016 AMK58_RS00740 efa9197a899700bd71f1cad69ad621e0 104 Gene3D G3DSA:3.30.70.900 4 92 5.9E-16 T 22-04-2016 AMK58_RS00740 efa9197a899700bd71f1cad69ad621e0 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 76 2.6E-11 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK58_RS00740 efa9197a899700bd71f1cad69ad621e0 104 SUPERFAMILY SSF54909 2 93 3.09E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK58_RS25145 18e5e697c2db4fed57f40e08f70bc371 124 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 124 9.8E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK58_RS25145 18e5e697c2db4fed57f40e08f70bc371 124 PANTHER PTHR30465:SF43 2 124 7.6E-37 T 22-04-2016 AMK58_RS25145 18e5e697c2db4fed57f40e08f70bc371 124 PANTHER PTHR30465 2 124 7.6E-37 T 22-04-2016 AMK58_RS01190 9853725af045fd78e933d0bf2014f2ce 243 PANTHER PTHR30060 1 241 8.0E-111 T 22-04-2016 AMK58_RS01190 9853725af045fd78e933d0bf2014f2ce 243 Pfam PF03741 Integral membrane protein TerC family 15 203 1.3E-48 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 AMK58_RS01190 9853725af045fd78e933d0bf2014f2ce 243 PANTHER PTHR30060:SF1 1 241 8.0E-111 T 22-04-2016 AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 Gene3D G3DSA:3.40.50.300 1 228 3.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 Pfam PF00005 ABC transporter 19 161 7.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 PANTHER PTHR24220:SF568 3 233 5.9E-108 T 22-04-2016 AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 SMART SM00382 26 210 3.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 SUPERFAMILY SSF52540 2 230 4.24E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11650 c56ef0713b7aa57fb1a8a2829ebdae8b 233 PANTHER PTHR24220 3 233 5.9E-108 T 22-04-2016 AMK58_RS01595 0905490bf3bbc72d609d6e432e48a053 190 Pfam PF07813 LTXXQ motif family protein 55 147 3.0E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 AMK58_RS01870 ca1f7e0d8d2a3b6969d09dfebf1eec9f 461 SUPERFAMILY SSF116734 268 438 2.13E-8 T 22-04-2016 AMK58_RS04265 3e0645910aa369eb12acb0b84144ad90 161 Pfam PF09361 Phasin protein 47 144 2.9E-24 T 22-04-2016 IPR018968 Phasin AMK58_RS04265 3e0645910aa369eb12acb0b84144ad90 161 TIGRFAM TIGR01841 phasin: phasin family protein 67 150 1.7E-12 T 22-04-2016 IPR010127 Phasin, subfamily 1 AMK58_RS00460 067b5e3d54df16158f510edfff2836d6 204 PANTHER PTHR35335:SF1 1 179 2.2E-33 T 22-04-2016 AMK58_RS00460 067b5e3d54df16158f510edfff2836d6 204 PANTHER PTHR35335 1 179 2.2E-33 T 22-04-2016 AMK58_RS00460 067b5e3d54df16158f510edfff2836d6 204 Pfam PF04186 FxsA cytoplasmic membrane protein 6 111 3.3E-33 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AMK58_RS02000 cb8453fa461baacd76c52826f325cfcc 325 SUPERFAMILY SSF75708 86 264 6.41E-39 T 22-04-2016 AMK58_RS02000 cb8453fa461baacd76c52826f325cfcc 325 Gene3D G3DSA:1.10.287.500 160 206 1.6E-10 T 22-04-2016 AMK58_RS02000 cb8453fa461baacd76c52826f325cfcc 325 Gene3D G3DSA:1.10.287.500 113 153 1.0E-5 T 22-04-2016 AMK58_RS02000 cb8453fa461baacd76c52826f325cfcc 325 Pfam PF04344 Chemotaxis phosphatase, CheZ 166 264 3.7E-7 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- AMK58_RS05185 6d0c7264f26cb95fa4688fbf551e81c7 62 Pfam PF06698 Protein of unknown function (DUF1192) 4 59 5.9E-22 T 22-04-2016 IPR009579 Protein of unknown function DUF1192 AMK58_RS13195 ece7f00d2af44da23b8474e9a4e8c192 87 Pfam PF06233 Usg-like family 7 85 8.9E-40 T 22-04-2016 IPR009354 Usg-like UniPathway: UPA00035 AMK58_RS06545 f5efddaf5ea73e981ec046dacc4c6e04 174 SMART SM00448 51 162 3.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06545 f5efddaf5ea73e981ec046dacc4c6e04 174 SUPERFAMILY SSF52172 49 170 2.28E-26 T 22-04-2016 IPR011006 CheY-like superfamily AMK58_RS06545 f5efddaf5ea73e981ec046dacc4c6e04 174 PANTHER PTHR26402 51 168 1.3E-19 T 22-04-2016 AMK58_RS06545 f5efddaf5ea73e981ec046dacc4c6e04 174 Pfam PF00072 Response regulator receiver domain 54 162 1.0E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK58_RS06545 f5efddaf5ea73e981ec046dacc4c6e04 174 Gene3D G3DSA:3.40.50.2300 49 168 4.8E-25 T 22-04-2016 AMK58_RS05555 242ede51e6dcaa5192d9488cf029868a 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 16 161 3.1E-21 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMK58_RS05555 242ede51e6dcaa5192d9488cf029868a 170 Pfam PF04093 rod shape-determining protein MreD 17 156 6.3E-17 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMK58_RS03105 41a7cc17dbf7c71d70af1400d19a7e3f 418 PANTHER PTHR40940:SF1 39 373 3.8E-21 T 22-04-2016 AMK58_RS03105 41a7cc17dbf7c71d70af1400d19a7e3f 418 PANTHER PTHR40940 39 373 3.8E-21 T 22-04-2016 AMK58_RS03105 41a7cc17dbf7c71d70af1400d19a7e3f 418 Pfam PF13584 Oxygen tolerance 20 328 1.8E-31 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD AMK58_RS12325 958a856ff0be5be9f3b0b3c2aa64b00a 169 Gene3D G3DSA:2.30.110.10 7 167 1.9E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK58_RS12325 958a856ff0be5be9f3b0b3c2aa64b00a 169 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 9 157 2.2E-50 T 22-04-2016 AMK58_RS12325 958a856ff0be5be9f3b0b3c2aa64b00a 169 PANTHER PTHR34818 1 169 4.7E-43 T 22-04-2016 AMK58_RS12325 958a856ff0be5be9f3b0b3c2aa64b00a 169 SUPERFAMILY SSF50475 11 141 1.14E-35 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK58_RS05205 ec82d050cac6f138f2b446e6fcb54298 111 Pfam PF04380 Membrane fusogenic activity 3 78 6.4E-26 T 22-04-2016 IPR007475 Membrane fusogenic activity AMK58_RS20965 f8db344342e3896e934acff6d597e8e8 185 Pfam PF02674 Colicin V production protein 1 141 6.8E-28 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMK58_RS20965 f8db344342e3896e934acff6d597e8e8 185 PANTHER PTHR36926 1 153 1.4E-25 T 22-04-2016 AMK58_RS20965 f8db344342e3896e934acff6d597e8e8 185 PANTHER PTHR36926:SF1 1 153 1.4E-25 T 22-04-2016 AMK58_RS05190 c52edf839f3eb784c5e97a0179fbc998 279 Pfam PF09955 Predicted integral membrane protein (DUF2189) 89 212 1.3E-38 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 AMK58_RS04165 ceba27a8043e015e904e6956b555c646 97 Pfam PF11154 Protein of unknown function (DUF2934) 5 39 1.3E-12 T 22-04-2016 IPR021327 Protein of unknown function DUF2934 AMK58_RS12765 ac669a9d8c8e7159673055957703fdbf 339 Pfam PF13489 Methyltransferase domain 123 271 6.2E-9 T 22-04-2016 AMK58_RS12765 ac669a9d8c8e7159673055957703fdbf 339 Gene3D G3DSA:3.40.50.150 116 300 1.2E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS12765 ac669a9d8c8e7159673055957703fdbf 339 SUPERFAMILY SSF53335 107 324 2.17E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK58_RS06515 0152568d13b1b53120a58667c099e2a2 244 PANTHER PTHR22936 32 212 9.3E-34 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK58_RS06515 0152568d13b1b53120a58667c099e2a2 244 PANTHER PTHR22936 1 14 9.3E-34 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK58_RS06515 0152568d13b1b53120a58667c099e2a2 244 Gene3D G3DSA:1.20.1540.10 2 205 6.7E-42 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK58_RS06515 0152568d13b1b53120a58667c099e2a2 244 SUPERFAMILY SSF144091 2 205 5.89E-40 T 22-04-2016 AMK58_RS06515 0152568d13b1b53120a58667c099e2a2 244 Pfam PF01694 Rhomboid family 52 203 6.7E-40 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK58_RS13445 d53b726e47957819183dbfd01d9dbc51 144 SUPERFAMILY SSF48295 8 61 4.6E-10 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK58_RS13445 d53b726e47957819183dbfd01d9dbc51 144 Pfam PF01527 Transposase 13 80 5.2E-16 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK58_RS13445 d53b726e47957819183dbfd01d9dbc51 144 Gene3D G3DSA:1.10.10.60 21 55 1.6E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS16090 66a81299c74a6a3e970f56640890f11a 84 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 12 83 1.2E-11 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 SMART SM00849 27 216 1.4E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 Gene3D G3DSA:3.60.15.10 5 273 1.5E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 Pfam PF12706 Beta-lactamase superfamily domain 39 239 1.6E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 SUPERFAMILY SSF56281 5 273 4.06E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 PANTHER PTHR12553 1 273 2.2E-79 T 22-04-2016 AMK58_RS09085 0c16160291b124e2612942eec79409fa 274 PANTHER PTHR12553:SF29 1 273 2.2E-79 T 22-04-2016 AMK58_RS04245 8be083b6319923a23c2d721378b46111 116 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 22 113 9.2E-35 T 22-04-2016 IPR019225 Protein of unknown function DUF2155 AMK58_RS02920 5fdf2d6bae634c114fb536731dc20087 446 SUPERFAMILY SSF53098 147 395 1.44E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK58_RS02920 5fdf2d6bae634c114fb536731dc20087 446 Pfam PF13701 Transposase DDE domain group 1 12 445 8.0E-157 T 22-04-2016 IPR025668 Transposase DDE domain AMK58_RS09725 8c4edce531684082c2109bb3f6b5e213 267 PANTHER PTHR30028 1 265 5.8E-76 T 22-04-2016 AMK58_RS09725 8c4edce531684082c2109bb3f6b5e213 267 PANTHER PTHR30028:SF0 1 265 5.8E-76 T 22-04-2016 IPR005226 UPF0014 family AMK58_RS09725 8c4edce531684082c2109bb3f6b5e213 267 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 5 256 1.8E-52 T 22-04-2016 IPR005226 UPF0014 family AMK58_RS09725 8c4edce531684082c2109bb3f6b5e213 267 Pfam PF03649 Uncharacterised protein family (UPF0014) 8 248 8.7E-82 T 22-04-2016 IPR005226 UPF0014 family AMK58_RS05250 c2803b00b3cd7cef991d387d9f600155 320 PANTHER PTHR40277 3 320 3.5E-34 T 22-04-2016 AMK58_RS05250 c2803b00b3cd7cef991d387d9f600155 320 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 20 307 8.7E-36 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMK58_RS08360 f7470c63703c1302e38454872305d29f 170 Gene3D G3DSA:1.20.1260.10 1 163 7.4E-67 T 22-04-2016 IPR012347 Ferritin-related AMK58_RS08360 f7470c63703c1302e38454872305d29f 170 SUPERFAMILY SSF47240 1 152 4.78E-54 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK58_RS08360 f7470c63703c1302e38454872305d29f 170 Pfam PF05974 Domain of unknown function (DUF892) 5 161 1.0E-59 T 22-04-2016 IPR010287 Domain of unknown function DUF892 AMK58_RS08360 f7470c63703c1302e38454872305d29f 170 PANTHER PTHR30565 1 168 1.1E-61 T 22-04-2016 AMK58_RS12280 7c76173700aa566562c658212ef8c0f6 444 PANTHER PTHR40253 57 272 9.0E-14 T 22-04-2016 AMK58_RS12280 7c76173700aa566562c658212ef8c0f6 444 SUPERFAMILY SSF48371 11 134 1.25E-7 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK58_RS12280 7c76173700aa566562c658212ef8c0f6 444 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 153 435 2.8E-76 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 AMK58_RS05490 0aa6fb0aec4e3aa50e790ec0b616a7ed 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 6.1E-21 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 AMK58_RS04415 7972ed37afb456cd8326144b19ea5230 245 PANTHER PTHR30473 42 239 6.0E-102 T 22-04-2016 AMK58_RS04415 7972ed37afb456cd8326144b19ea5230 245 Gene3D G3DSA:3.40.50.300 43 242 6.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS04415 7972ed37afb456cd8326144b19ea5230 245 Pfam PF02562 PhoH-like protein 43 243 5.2E-81 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 AMK58_RS04415 7972ed37afb456cd8326144b19ea5230 245 PANTHER PTHR30473:SF1 42 239 6.0E-102 T 22-04-2016 AMK58_RS04415 7972ed37afb456cd8326144b19ea5230 245 SUPERFAMILY SSF52540 43 222 5.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS09350 f324a87099a6b86ea9624ed2f24cf8e8 147 Gene3D G3DSA:3.20.20.30 2 123 9.8E-5 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK58_RS07330 d4a9992c23523c56469a42877c3b4eb3 228 PANTHER PTHR36926 5 163 3.8E-29 T 22-04-2016 AMK58_RS07330 d4a9992c23523c56469a42877c3b4eb3 228 PANTHER PTHR36926:SF1 5 163 3.8E-29 T 22-04-2016 AMK58_RS07330 d4a9992c23523c56469a42877c3b4eb3 228 Pfam PF02674 Colicin V production protein 10 151 4.3E-29 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMK58_RS05980 dca9c381d8b62db8da426d821b53e6f8 152 Gene3D G3DSA:1.20.120.520 10 138 2.6E-11 T 22-04-2016 AMK58_RS05980 dca9c381d8b62db8da426d821b53e6f8 152 PANTHER PTHR35585 1 141 3.1E-14 T 22-04-2016 AMK58_RS05980 dca9c381d8b62db8da426d821b53e6f8 152 Pfam PF01814 Hemerythrin HHE cation binding domain 4 116 5.5E-12 T 22-04-2016 IPR012312 Haemerythrin-like AMK58_RS10110 c6645bd2b729ce49e77c42dd3f01c8b1 1137 SUPERFAMILY SSF48452 598 667 6.96E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS10110 c6645bd2b729ce49e77c42dd3f01c8b1 1137 Gene3D G3DSA:1.25.40.10 584 800 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS11610 30c3e26e7bc8de3b6c18cc0e352fd891 212 Pfam PF04315 Elongation factor P hydroxylase 91 116 1.0E-4 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- AMK58_RS21195 0e8d46b779c5076702ef67faabf3f84d 68 Pfam PF16980 Putative citrate transport 1 68 1.4E-22 T 22-04-2016 IPR031566 Putative citrate transporter AMK58_RS11100 9e4407817448de5c122b7cbed40840ca 295 PANTHER PTHR32308 1 285 1.7E-79 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like AMK58_RS11100 9e4407817448de5c122b7cbed40840ca 295 SUPERFAMILY SSF51621 6 233 9.42E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS11100 9e4407817448de5c122b7cbed40840ca 295 Gene3D G3DSA:3.20.20.60 6 233 7.8E-69 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK58_RS11100 9e4407817448de5c122b7cbed40840ca 295 PIRSF PIRSF015582 1 290 7.5E-80 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like AMK58_RS11100 9e4407817448de5c122b7cbed40840ca 295 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 222 1.2E-40 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMK58_RS05070 925a29a39a947854b8ac9e5c2cc7e84c 358 SUPERFAMILY SSF53756 2 350 1.36E-12 T 22-04-2016 AMK58_RS05070 925a29a39a947854b8ac9e5c2cc7e84c 358 Pfam PF13524 Glycosyl transferases group 1 255 347 1.3E-17 T 22-04-2016 AMK58_RS01075 ce808924292e262b7c929993b41931bf 270 SUPERFAMILY SSF89260 25 89 3.92E-6 T 22-04-2016 AMK58_RS01075 ce808924292e262b7c929993b41931bf 270 Gene3D G3DSA:2.60.120.380 28 105 1.1E-7 T 22-04-2016 AMK58_RS12395 c1678615b4f03d3dd32989079c30592e 403 SUPERFAMILY SSF53756 27 373 2.72E-43 T 22-04-2016 AMK58_RS12395 c1678615b4f03d3dd32989079c30592e 403 PANTHER PTHR12526 200 354 1.6E-31 T 22-04-2016 AMK58_RS12395 c1678615b4f03d3dd32989079c30592e 403 Gene3D G3DSA:3.40.50.2000 195 354 1.6E-20 T 22-04-2016 AMK58_RS12395 c1678615b4f03d3dd32989079c30592e 403 Pfam PF00534 Glycosyl transferases group 1 198 354 3.2E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK58_RS07530 f5595bbf139d85cc2eb6a454924dc393 237 Gene3D G3DSA:3.40.50.880 1 229 3.8E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS07530 f5595bbf139d85cc2eb6a454924dc393 237 Pfam PF00117 Glutamine amidotransferase class-I 20 180 2.4E-20 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK58_RS07530 f5595bbf139d85cc2eb6a454924dc393 237 SUPERFAMILY SSF52317 1 194 1.38E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK58_RS07530 f5595bbf139d85cc2eb6a454924dc393 237 PANTHER PTHR11922 1 224 5.5E-42 T 22-04-2016 AMK58_RS07530 f5595bbf139d85cc2eb6a454924dc393 237 PANTHER PTHR11922:SF11 1 224 5.5E-42 T 22-04-2016 AMK58_RS27790 5e88f0d6856bff81d9bbed41c8c6f07a 233 SUPERFAMILY SSF56349 55 127 2.75E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS27790 5e88f0d6856bff81d9bbed41c8c6f07a 233 SUPERFAMILY SSF56349 158 215 2.75E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK58_RS27790 5e88f0d6856bff81d9bbed41c8c6f07a 233 Gene3D G3DSA:1.10.443.10 170 218 1.9E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK58_RS27790 5e88f0d6856bff81d9bbed41c8c6f07a 233 Gene3D G3DSA:1.10.150.130 58 115 7.7E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK58_RS07990 43d1d1004cba0ff8e95040beb83fd740 108 Pfam PF03692 Putative zinc- or iron-chelating domain 21 92 7.6E-9 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein AMK58_RS11385 79532e96bcc4dea5fc2496647d092907 258 PANTHER PTHR23293 2 172 2.0E-50 T 22-04-2016 AMK58_RS11385 79532e96bcc4dea5fc2496647d092907 258 Pfam PF00994 Probable molybdopterin binding domain 13 172 2.8E-33 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS11385 79532e96bcc4dea5fc2496647d092907 258 SUPERFAMILY SSF53218 9 197 1.14E-38 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS11385 79532e96bcc4dea5fc2496647d092907 258 Gene3D G3DSA:3.40.980.10 9 209 5.0E-37 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS11385 79532e96bcc4dea5fc2496647d092907 258 SMART SM00852 13 174 5.0E-30 T 22-04-2016 IPR001453 MoaB/Mog domain AMK58_RS11010 dd4b86cbad4f8f2f3c29a772c618a035 135 SUPERFAMILY SSF51120 10 107 8.63E-6 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK58_RS25230 f28d1a26a4ca625f1d7e0c430263f5a5 150 Pfam PF12100 Domain of unknown function (DUF3576) 56 150 1.8E-40 T 22-04-2016 IPR021959 Protein of unknown function DUF3576 AMK58_RS05015 6b20194789f31956efd8acd2ecbdda9a 208 Pfam PF04891 NifQ 34 188 2.2E-55 T 22-04-2016 IPR006975 NifQ GO:0009399|GO:0030151 AMK58_RS09570 68c90f64c81c2331ff96fff09d5a40d6 62 Pfam PF07043 Protein of unknown function (DUF1328) 14 50 2.5E-14 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK58_RS09570 68c90f64c81c2331ff96fff09d5a40d6 62 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 9 58 20.453 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK58_RS09570 68c90f64c81c2331ff96fff09d5a40d6 62 PIRSF PIRSF036466 9 62 1.8E-22 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 SUPERFAMILY SSF54995 1 104 1.01E-32 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 Pfam PF01250 Ribosomal protein S6 4 92 4.7E-29 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.5E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 Gene3D G3DSA:3.30.70.60 1 105 1.7E-35 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.374 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK58_RS07395 48609c13e3205b176503f0999a0358b7 145 PANTHER PTHR21011 1 126 3.3E-29 T 22-04-2016 AMK58_RS01445 190fedd15745e3dc7baf5bd49a67a343 64 Pfam PF06568 Domain of unknown function (DUF1127) 19 54 5.6E-13 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 AMK58_RS00685 54a6225f8e2a2f15bb5b1a2f27752002 138 Pfam PF05443 ROS/MUCR transcriptional regulator protein 10 130 3.5E-51 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMK58_RS04725 e413fb03f424f304d2a018320a4b9e28 103 Pfam PF04319 NifZ domain 19 89 1.3E-23 T 22-04-2016 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 SUPERFAMILY SSF55811 5 174 1.76E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 PANTHER PTHR11839:SF9 4 157 2.4E-22 T 22-04-2016 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 Gene3D G3DSA:3.90.79.10 7 175 2.4E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 PANTHER PTHR11839 4 157 2.4E-22 T 22-04-2016 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK58_RS07345 9153a9ab48dc637e4ba26e55e67f01ca 196 Pfam PF00293 NUDIX domain 51 169 4.2E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK58_RS06620 722d42496c530700bb6864f1fd38b1df 143 TIGRFAM TIGR01616 nitro_assoc: nitrogenase-associated protein 3 119 2.8E-41 T 22-04-2016 IPR006503 Nitrogenase-associated protein AMK58_RS06620 722d42496c530700bb6864f1fd38b1df 143 Gene3D G3DSA:3.40.30.10 4 114 8.6E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06620 722d42496c530700bb6864f1fd38b1df 143 SUPERFAMILY SSF52833 4 117 5.59E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK58_RS06620 722d42496c530700bb6864f1fd38b1df 143 Pfam PF03960 ArsC family 57 110 7.9E-7 T 22-04-2016 IPR006660 Arsenate reductase-like AMK58_RS08770 77db2715ce1e24d5ec159c195f8cbcf8 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 237 1.7E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK58_RS08770 77db2715ce1e24d5ec159c195f8cbcf8 251 Gene3D G3DSA:3.40.190.10 51 149 6.0E-5 T 22-04-2016 AMK58_RS08770 77db2715ce1e24d5ec159c195f8cbcf8 251 SUPERFAMILY SSF53850 43 241 1.21E-17 T 22-04-2016 AMK58_RS08770 77db2715ce1e24d5ec159c195f8cbcf8 251 Gene3D G3DSA:3.40.190.10 150 207 4.7E-4 T 22-04-2016 AMK58_RS05590 9e5771512f6a52736a92e71160717614 386 Pfam PF02653 Branched-chain amino acid transport system / permease component 72 357 1.2E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS05590 9e5771512f6a52736a92e71160717614 386 PANTHER PTHR32196 11 383 5.0E-97 T 22-04-2016 AMK58_RS05590 9e5771512f6a52736a92e71160717614 386 PANTHER PTHR32196:SF30 11 383 5.0E-97 T 22-04-2016 AMK58_RS07310 3a9f141adbf15d16399a0faeed21be39 146 Pfam PF14325 Domain of unknown function (DUF4383) 4 130 7.3E-37 T 22-04-2016 IPR025492 Protein of unknown function DUF4383 AMK58_RS05885 060a8e483cc11954c2bb7272cfc6dd68 206 SUPERFAMILY SSF50346 42 159 1.16E-18 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS05885 060a8e483cc11954c2bb7272cfc6dd68 206 PANTHER PTHR36505:SF2 51 182 3.2E-18 T 22-04-2016 AMK58_RS05885 060a8e483cc11954c2bb7272cfc6dd68 206 Gene3D G3DSA:2.30.30.240 69 124 1.4E-13 T 22-04-2016 AMK58_RS05885 060a8e483cc11954c2bb7272cfc6dd68 206 PANTHER PTHR36505 51 182 3.2E-18 T 22-04-2016 AMK58_RS05885 060a8e483cc11954c2bb7272cfc6dd68 206 Pfam PF05239 PRC-barrel domain 71 135 4.5E-13 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS07205 7cfd9ba2c4599f9bd0cefbdda6b1837f 74 SUPERFAMILY SSF140376 4 73 2.09E-19 T 22-04-2016 AMK58_RS07205 7cfd9ba2c4599f9bd0cefbdda6b1837f 74 Pfam PF06150 ChaB 9 73 2.4E-19 T 22-04-2016 IPR009317 ChaB AMK58_RS09240 1d1a0bebb8da1ec5b50b70c51d55c983 333 PANTHER PTHR22926:SF3 4 326 4.4E-60 T 22-04-2016 AMK58_RS09240 1d1a0bebb8da1ec5b50b70c51d55c983 333 Pfam PF00953 Glycosyl transferase family 4 80 228 1.8E-29 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS09240 1d1a0bebb8da1ec5b50b70c51d55c983 333 PANTHER PTHR22926 4 326 4.4E-60 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK58_RS11990 93d63e0a85cdeffd126a94bbfe5a3094 92 Pfam PF10387 Protein of unknown function (DUF2442) 13 81 1.7E-22 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 AMK58_RS03460 3dcfcd4348718021557285306958e406 127 PIRSF PIRSF009151 1 121 4.2E-56 T 22-04-2016 IPR008497 Protein of unknown function DUF779 AMK58_RS03460 3dcfcd4348718021557285306958e406 127 Pfam PF05610 Protein of unknown function (DUF779) 14 107 3.6E-46 T 22-04-2016 IPR008497 Protein of unknown function DUF779 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 PANTHER PTHR33498:SF1 292 480 9.9E-40 T 22-04-2016 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 PANTHER PTHR33498:SF1 1 188 9.9E-40 T 22-04-2016 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 PANTHER PTHR33498 292 480 9.9E-40 T 22-04-2016 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 Gene3D G3DSA:1.10.10.60 239 268 1.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 PANTHER PTHR33498 1 188 9.9E-40 T 22-04-2016 AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 Pfam PF01610 Transposase 355 478 9.2E-8 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AMK58_RS02860 1e7b674fa685069fccd7d6752189511d 483 Pfam PF01610 Transposase 88 191 8.4E-19 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 PANTHER PTHR33778 10 149 3.0E-37 T 22-04-2016 AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 Pfam PF02308 MgtC family 16 143 4.2E-29 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 PRINTS PR01837 MgtC/SapB protein signature 38 56 1.4E-36 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 PRINTS PR01837 MgtC/SapB protein signature 101 125 1.4E-36 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 PRINTS PR01837 MgtC/SapB protein signature 19 38 1.4E-36 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS02230 d161628de4dd39cdd20f0593220cdd6d 157 PRINTS PR01837 MgtC/SapB protein signature 74 96 1.4E-36 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK58_RS06210 b91f06b747f70171bdc1abe1e532ac27 82 Pfam PF07330 Protein of unknown function (DUF1467) 1 78 8.8E-27 T 22-04-2016 IPR009935 Protein of unknown function DUF1467 AMK58_RS17645 2aed727217541a90c4a15715d0cf1352 167 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 64 155 5.5E-31 T 22-04-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784|UniPathway: UPA00114 AMK58_RS06900 913a0f9a8d1e2ef7308c419b8267077a 144 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 58 141 9.7E-37 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 AMK58_RS06900 913a0f9a8d1e2ef7308c419b8267077a 144 PANTHER PTHR10160 54 141 2.3E-36 T 22-04-2016 AMK58_RS05175 7bbe031964e2c6f5439b7662c6ffde25 205 Pfam PF06242 Protein of unknown function (DUF1013) 34 169 5.3E-63 T 22-04-2016 IPR010421 Protein of unknown function DUF1013 AMK58_RS11505 de9dc1ad9236a56f9d0ab5c9cf75a9d5 98 Hamap MF_02117 N(2)-fixation sustaining protein CowN [cowN]. 4 98 26.215 T 22-04-2016 IPR024899 Nitrogen fixation-sustaining protein CowN GO:0009399 AMK58_RS00150 14f4b55c56ed3dda54b0cb41f35fae47 401 PIRSF PIRSF028704 1 398 8.7E-66 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AMK58_RS00150 14f4b55c56ed3dda54b0cb41f35fae47 401 Pfam PF10129 OpgC protein 3 385 7.1E-67 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AMK58_RS00150 14f4b55c56ed3dda54b0cb41f35fae47 401 PANTHER PTHR38592 1 306 8.5E-28 T 22-04-2016 AMK58_RS00150 14f4b55c56ed3dda54b0cb41f35fae47 401 PANTHER PTHR38592 322 398 8.5E-28 T 22-04-2016 AMK58_RS08955 cefa5b819b37c58ec51fbca30fccbc61 405 Pfam PF14326 Domain of unknown function (DUF4384) 276 344 1.9E-9 T 22-04-2016 IPR025493 Domain of unknown function DUF4384 AMK58_RS06165 a9d20d8287b32b8abc1e42d6995a3de8 204 PANTHER PTHR33269 1 199 6.3E-63 T 22-04-2016 AMK58_RS06165 a9d20d8287b32b8abc1e42d6995a3de8 204 PANTHER PTHR33269:SF4 1 199 6.3E-63 T 22-04-2016 AMK58_RS06165 a9d20d8287b32b8abc1e42d6995a3de8 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 3.1E-37 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 AMK58_RS19035 69ffb4674414d3a60fdc03e38d3c4c87 179 SUPERFAMILY SSF53323 8 93 2.48E-5 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMK58_RS01250 930421d9996012bc7a351df540f88094 271 SUPERFAMILY SSF56300 11 129 1.14E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS01250 930421d9996012bc7a351df540f88094 271 SUPERFAMILY SSF56300 157 256 1.14E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS01250 930421d9996012bc7a351df540f88094 271 Gene3D G3DSA:3.60.21.10 8 260 1.1E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK58_RS05580 be6b25031ab7820dc5a997749436ed16 330 PANTHER PTHR34296 32 325 5.6E-104 T 22-04-2016 AMK58_RS05580 be6b25031ab7820dc5a997749436ed16 330 Pfam PF02608 Basic membrane protein 32 320 8.0E-60 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK58_RS05580 be6b25031ab7820dc5a997749436ed16 330 PANTHER PTHR34296:SF2 32 325 5.6E-104 T 22-04-2016 AMK58_RS05580 be6b25031ab7820dc5a997749436ed16 330 Gene3D G3DSA:3.40.50.2300 133 294 6.3E-57 T 22-04-2016 AMK58_RS05580 be6b25031ab7820dc5a997749436ed16 330 SUPERFAMILY SSF53822 41 272 2.59E-16 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK58_RS02540 46f68fac2ee55a4203464f577dda7ec8 384 Pfam PF03969 AFG1-like ATPase 8 380 5.2E-124 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMK58_RS02540 46f68fac2ee55a4203464f577dda7ec8 384 PANTHER PTHR12169 4 383 4.7E-162 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMK58_RS02540 46f68fac2ee55a4203464f577dda7ec8 384 SUPERFAMILY SSF52540 69 213 5.99E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS02540 46f68fac2ee55a4203464f577dda7ec8 384 Gene3D G3DSA:3.40.50.300 69 214 1.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK58_RS11995 f9859ab07624eba51c31c0791bf37978 80 Pfam PF13711 Domain of unknown function (DUF4160) 9 73 3.2E-20 T 22-04-2016 IPR025427 Protein of unknown function DUF4160 AMK58_RS00935 f64302481ab017718869d9d743bfa069 121 Pfam PF11162 Protein of unknown function (DUF2946) 3 118 1.4E-6 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 AMK58_RS03790 57f8765ba8b394ed05c20dd8a0a2c974 221 SUPERFAMILY SSF53474 7 193 1.17E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS03790 57f8765ba8b394ed05c20dd8a0a2c974 221 Gene3D G3DSA:3.40.50.1820 9 193 4.3E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK58_RS04790 dae395d2a31f944cd56e654213f50465 377 PANTHER PTHR30294:SF12 3 373 1.6E-99 T 22-04-2016 AMK58_RS04790 dae395d2a31f944cd56e654213f50465 377 Pfam PF12698 ABC-2 family transporter protein 26 369 8.6E-53 T 22-04-2016 AMK58_RS04790 dae395d2a31f944cd56e654213f50465 377 PANTHER PTHR30294 3 373 1.6E-99 T 22-04-2016 AMK58_RS13110 1bbd61c312abdd640403d07a429963a1 161 Pfam PF04214 Protein of unknown function, DUF 68 136 6.5E-34 T 22-04-2016 IPR007332 Protein of unknown function DUF411 AMK58_RS13675 103ece7323f2676ddb00f6bd90e0a5f7 132 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 24 126 1.8E-30 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AMK58_RS13675 103ece7323f2676ddb00f6bd90e0a5f7 132 PANTHER PTHR32039:SF7 7 128 8.2E-33 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK58_RS13675 103ece7323f2676ddb00f6bd90e0a5f7 132 PANTHER PTHR32039 7 128 8.2E-33 T 22-04-2016 AMK58_RS02930 6e558a4967186e11f6206971c0342b11 301 Pfam PF05598 Transposase domain (DUF772) 43 107 9.2E-21 T 22-04-2016 IPR008490 Transposase InsH, N-terminal AMK58_RS12805 4d8a1485583072804cb4599494f431a9 100 PANTHER PTHR38598 1 98 2.7E-42 T 22-04-2016 AMK58_RS12805 4d8a1485583072804cb4599494f431a9 100 Pfam PF04341 Protein of unknown function, DUF485 10 96 1.7E-37 T 22-04-2016 IPR007436 Protein of unknown function DUF485 AMK58_RS04325 7410377b3322623eaccd08a1f1ebbad3 66 PIRSF PIRSF036704 1 65 1.2E-10 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing AMK58_RS13610 f8fb6fa84afe652a45c65e99b246dcd9 204 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 192 2.2E-30 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB AMK58_RS00475 cae3cb6142cf2da0f7693977e710c770 280 Pfam PF06724 Domain of Unknown Function (DUF1206) 20 86 1.3E-20 T 22-04-2016 IPR009597 Domain of unknown function DUF1206 AMK58_RS00475 cae3cb6142cf2da0f7693977e710c770 280 Pfam PF06724 Domain of Unknown Function (DUF1206) 196 264 3.5E-19 T 22-04-2016 IPR009597 Domain of unknown function DUF1206 AMK58_RS00475 cae3cb6142cf2da0f7693977e710c770 280 Pfam PF06724 Domain of Unknown Function (DUF1206) 102 173 6.0E-15 T 22-04-2016 IPR009597 Domain of unknown function DUF1206 AMK58_RS09405 eab561118f8d882b4ec39b1a790d27e9 395 SUPERFAMILY SSF58113 343 379 1.09E-5 T 22-04-2016 AMK58_RS09405 eab561118f8d882b4ec39b1a790d27e9 395 SUPERFAMILY SSF58113 246 310 1.09E-5 T 22-04-2016 AMK58_RS07360 18f4048b1d1af46502baa00dc7c192c0 258 Pfam PF02405 Permease MlaE 42 251 8.5E-81 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMK58_RS07360 18f4048b1d1af46502baa00dc7c192c0 258 PANTHER PTHR30188:SF4 8 255 3.1E-96 T 22-04-2016 AMK58_RS07360 18f4048b1d1af46502baa00dc7c192c0 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 21 255 4.5E-76 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMK58_RS07360 18f4048b1d1af46502baa00dc7c192c0 258 PANTHER PTHR30188 8 255 3.1E-96 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMK58_RS10205 e5cb39a73e93661a5f13c4db36012726 670 Pfam PF02120 Flagellar hook-length control protein FliK 542 625 2.4E-16 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal AMK58_RS00990 582836e5bd0c4b0a23c67698bc4bc040 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 49 3.0E-18 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component AMK58_RS13630 f87ff7697a6869460d6603231d2cf8d2 293 Pfam PF00892 EamA-like transporter family 146 276 2.2E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS13630 f87ff7697a6869460d6603231d2cf8d2 293 Pfam PF00892 EamA-like transporter family 7 136 1.2E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS13630 f87ff7697a6869460d6603231d2cf8d2 293 PANTHER PTHR22911 1 278 2.4E-31 T 22-04-2016 AMK58_RS13630 f87ff7697a6869460d6603231d2cf8d2 293 SUPERFAMILY SSF103481 43 138 1.44E-9 T 22-04-2016 AMK58_RS13630 f87ff7697a6869460d6603231d2cf8d2 293 SUPERFAMILY SSF103481 183 281 3.14E-10 T 22-04-2016 AMK58_RS07115 827bd414baa10d12a23c88414cd0a7f8 131 Pfam PF11127 Protein of unknown function (DUF2892) 16 70 1.1E-10 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 AMK58_RS12500 d956deea65e674ce8a549fee2e33c6c9 304 SUPERFAMILY SSF103481 219 301 4.45E-6 T 22-04-2016 AMK58_RS12500 d956deea65e674ce8a549fee2e33c6c9 304 PANTHER PTHR32322 6 304 2.0E-21 T 22-04-2016 AMK58_RS12500 d956deea65e674ce8a549fee2e33c6c9 304 SUPERFAMILY SSF103481 52 152 3.4E-11 T 22-04-2016 AMK58_RS12500 d956deea65e674ce8a549fee2e33c6c9 304 Pfam PF00892 EamA-like transporter family 19 149 1.1E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK58_RS00620 0e50a583e8382f4f6ee08b08b4c347d9 230 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 203 7.8E-25 T 22-04-2016 AMK58_RS02165 38dc02ba2fd5e95c566154d9ad7965be 309 Pfam PF03547 Membrane transport protein 4 128 1.2E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK58_RS02165 38dc02ba2fd5e95c566154d9ad7965be 309 Pfam PF03547 Membrane transport protein 164 302 1.3E-13 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK58_RS09345 0f50159c60c21dd1cee3c652c669376a 114 Pfam PF05534 HicB family 62 101 6.0E-10 T 22-04-2016 IPR008651 Uncharacterised protein family HicB AMK58_RS09345 0f50159c60c21dd1cee3c652c669376a 114 SUPERFAMILY SSF143100 1 72 2.09E-11 T 22-04-2016 AMK58_RS09345 0f50159c60c21dd1cee3c652c669376a 114 SUPERFAMILY SSF47598 67 106 4.56E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK58_RS03320 db06b4ba16ff93e818bd26ea6897cbf2 163 Pfam PF17200 Single Cache domain 2 58 162 1.9E-15 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS03320 db06b4ba16ff93e818bd26ea6897cbf2 163 SMART SM01049 31 114 1.3E-5 T 22-04-2016 IPR033480 Single Cache domain 2 AMK58_RS03320 db06b4ba16ff93e818bd26ea6897cbf2 163 Gene3D G3DSA:3.30.450.20 38 162 7.9E-23 T 22-04-2016 AMK58_RS00005 d1a2be1d7585e49d295cf4969e983a99 72 Pfam PF08335 GlnD PII-uridylyltransferase 2 52 1.3E-12 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK58_RS01980 506f005de0d7e47368054a5e70001dfa 221 Pfam PF07298 NnrU protein 6 217 1.1E-39 T 22-04-2016 IPR009915 NnrU domain AMK58_RS04845 e7b2ef40de2f3542c15fb3ce9b4f036b 343 SUPERFAMILY SSF53955 28 170 9.0E-10 T 22-04-2016 IPR023346 Lysozyme-like domain AMK58_RS04845 e7b2ef40de2f3542c15fb3ce9b4f036b 343 Gene3D G3DSA:1.10.530.10 24 159 2.4E-10 T 22-04-2016 AMK58_RS01005 f7b3aa3c61a655e2794e759ed5c6112a 174 Pfam PF05751 FixH 26 171 4.4E-32 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH AMK58_RS07385 3776919e83906a46233155d061733272 318 Pfam PF09991 Predicted membrane protein (DUF2232) 19 295 7.3E-11 T 22-04-2016 IPR018710 Protein of unknown function DUF2232 AMK58_RS05765 cd768199566b43481a55c14ca658305b 402 Pfam PF05940 NnrS protein 17 396 1.1E-108 T 22-04-2016 IPR010266 NnrS AMK58_RS02090 3bc072c09d013c93e9903a3dbd860923 310 PIRSF PIRSF028235 1 310 1.3E-148 T 22-04-2016 IPR016877 Uncharacterised conserved protein UCP028235 AMK58_RS02090 3bc072c09d013c93e9903a3dbd860923 310 SUPERFAMILY SSF64182 9 304 5.89E-7 T 22-04-2016 AMK58_RS12730 762e680bdeb9935ecb8144df6b5dfcc6 76 Pfam PF06620 Protein of unknown function (DUF1150) 40 76 1.1E-11 T 22-04-2016 IPR009531 Protein of unknown function DUF1150 AMK58_RS04570 cc0864dc9367d8b2efe05e38426f7495 107 PIRSF PIRSF005790 1 107 1.1E-41 T 22-04-2016 IPR004893 Nitrogen fixation protein NifW GO:0009399 AMK58_RS04570 cc0864dc9367d8b2efe05e38426f7495 107 Pfam PF03206 Nitrogen fixation protein NifW 4 104 3.3E-35 T 22-04-2016 IPR004893 Nitrogen fixation protein NifW GO:0009399 AMK58_RS04570 cc0864dc9367d8b2efe05e38426f7495 107 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 1 105 23.861 T 22-04-2016 IPR004893 Nitrogen fixation protein NifW GO:0009399 AMK58_RS12075 92e5d7189aa18a6eab07900e1344d69a 154 Pfam PF14343 PrcB C-terminal 87 138 5.4E-10 T 22-04-2016 IPR025748 PrcB C-terminal domain AMK58_RS04885 ab428a9ba7d0c0a27cc376e6a8d70c7b 1210 Pfam PF13116 Protein of unknown function 526 794 2.6E-23 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 AMK58_RS04885 ab428a9ba7d0c0a27cc376e6a8d70c7b 1210 Pfam PF13502 AsmA-like C-terminal region 964 1172 4.7E-12 T 22-04-2016 IPR032712 AsmA-like, C-terminal AMK58_RS09175 2aa67c9b2578e6d8a9db92aa992d0a91 180 SUPERFAMILY SSF57997 24 88 1.37E-5 T 22-04-2016 AMK58_RS28370 cf40d9e82fd6278fdf283efa921f1862 88 PANTHER PTHR30269 12 88 2.9E-16 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS28370 cf40d9e82fd6278fdf283efa921f1862 88 Pfam PF01925 Sulfite exporter TauE/SafE 31 87 5.3E-11 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK58_RS28370 cf40d9e82fd6278fdf283efa921f1862 88 PANTHER PTHR30269:SF15 12 88 2.9E-16 T 22-04-2016 AMK58_RS19645 45c4226f7947c38f9f3f0cfed29c4501 179 Pfam PF12867 DinB superfamily 2 100 9.6E-11 T 22-04-2016 IPR024775 DinB-like domain AMK58_RS09975 b7029cf623eb7d747b5735f4460cf1c6 159 Pfam PF06146 Phosphate-starvation-inducible E 69 114 4.4E-8 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like AMK58_RS08720 977c21e5e3ccb00df02da97de185de39 88 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 8.4E-11 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain AMK58_RS05210 e8739e6c89234d0d29519c84b91c317d 167 Pfam PF10722 Putative bacterial sensory transduction regulator 15 144 1.4E-32 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN AMK58_RS07620 860c03727aec6a7b5d9d391afb044daa 160 PANTHER PTHR37953 1 160 1.4E-37 T 22-04-2016 AMK58_RS07620 860c03727aec6a7b5d9d391afb044daa 160 Pfam PF02643 Uncharacterized ACR, COG1430 50 152 5.7E-34 T 22-04-2016 IPR003795 Protein of unknown function DUF192 AMK58_RS07620 860c03727aec6a7b5d9d391afb044daa 160 PANTHER PTHR37953:SF1 1 160 1.4E-37 T 22-04-2016 AMK58_RS09115 0f087c1cf90d2d27d118d0737100dfa7 151 Pfam PF16998 17 kDa outer membrane surface antigen 68 149 3.1E-12 T 22-04-2016 IPR032635 Surface antigen domain AMK58_RS13520 f9f7fda3fc7361006d8e12bb47d79b12 63 Pfam PF03050 Transposase IS66 family 1 35 3.4E-12 T 22-04-2016 IPR004291 Transposase, IS66 AMK58_RS03400 cf3253134b42f91593a51a734af72f10 147 Pfam PF08448 PAS fold 52 141 4.8E-6 T 22-04-2016 IPR013656 PAS fold-4 AMK58_RS03305 fd279c603b1f1cb2b64b76fe1a22db0c 457 Pfam PF01566 Natural resistance-associated macrophage protein 57 411 3.1E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK58_RS13135 029ae2d0aae1f2d53f930f84ca73e156 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.6E-24 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMK58_RS13135 029ae2d0aae1f2d53f930f84ca73e156 75 Pfam PF06667 Phage shock protein B 3 73 1.1E-28 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMK58_RS04730 b525bf93be9a81dc5af3e2c018358cba 98 Pfam PF04319 NifZ domain 18 88 3.9E-29 T 22-04-2016 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 AMK58_RS12020 d969e045142b0d5cbbf3c9cd2644bb5c 187 Pfam PF04955 HupE / UreJ protein 16 180 9.5E-19 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein AMK58_RS27675 707687d548c4cbfc554d60ea7743a527 223 Pfam PF14461 Prokaryotic E2 family B 36 128 2.9E-9 T 22-04-2016 IPR032701 Prokaryotic E2 family B AMK58_RS10930 742c907a2820fcc92bbd480e106a2ff2 169 SUPERFAMILY SSF50346 64 155 1.81E-12 T 22-04-2016 IPR011033 PRC-barrel-like AMK58_RS10930 742c907a2820fcc92bbd480e106a2ff2 169 Pfam PF05239 PRC-barrel domain 73 128 1.2E-9 T 22-04-2016 IPR027275 PRC-barrel domain AMK58_RS10930 742c907a2820fcc92bbd480e106a2ff2 169 Gene3D G3DSA:2.30.30.240 67 116 6.5E-9 T 22-04-2016 AMK58_RS03960 0ff0f671c71a7522b86d3e04c25bda54 241 ProDom PD201674 DIVISION CELL RP568 MEMBRANE TRANSMEMBRANE FTSL 20 83 0.006 T 22-04-2016 AMK58_RS00230 e9a977a1a7cd4231c0436dc7a71248cb 272 SUPERFAMILY SSF88713 87 245 1.65E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK58_RS10240 f08404f4de5cfc34f8eefeb11e1adf12 265 Pfam PF10002 Predicted membrane protein (DUF2243) 21 158 1.3E-46 T 22-04-2016 IPR018719 Protein of unknown function DUF2243, membrane AMK58_RS13150 03033c8e51509925580abb159d2e23f0 103 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 6 95 1.5E-17 T 22-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein AMK58_RS24020 1799cf228788d7f98c20f98353ea7231 186 Pfam PF12236 Bacteriophage head to tail connecting protein 20 186 2.9E-55 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type AMK58_RS10255 cfd260f9319a00d591d42c84d682c78b 135 Pfam PF07323 Protein of unknown function (DUF1465) 4 130 1.3E-31 T 22-04-2016 IPR010848 Protein of unknown function DUF1465 AMK58_RS07905 a78b8ac76273dcfb1324aa6956c5d512 136 Pfam PF05443 ROS/MUCR transcriptional regulator protein 9 129 6.4E-47 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMK58_RS01345 09c14f331b033bad34f183818aaa36bb 228 SUPERFAMILY SSF51182 105 219 4.34E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS01345 09c14f331b033bad34f183818aaa36bb 228 Gene3D G3DSA:2.60.120.10 137 216 4.0E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS01345 09c14f331b033bad34f183818aaa36bb 228 Pfam PF12973 ChrR Cupin-like domain 137 205 6.3E-12 T 22-04-2016 IPR025979 ChrR-like cupin domain AMK58_RS01345 09c14f331b033bad34f183818aaa36bb 228 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 6 227 5.3E-57 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative AMK58_RS03255 fdc9a3fea0cba0822dc510d583242030 1003 PIRSF PIRSF034585 2 1003 2.0E-281 T 22-04-2016 IPR009216 Virulence factor SrfB AMK58_RS03255 fdc9a3fea0cba0822dc510d583242030 1003 Pfam PF07520 Virulence factor SrfB 3 1000 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB AMK58_RS03340 cbbc491e7496f8a29e8f3dfd9b7561ca 214 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 109 184 7.0E-9 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMK58_RS12540 1c81fe5a26aa33fd4a536287c8cc1899 204 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 4.1E-47 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 AMK58_RS18205 058584c32bb45cc2f23d2d6afcd47518 291 SUPERFAMILY SSF51182 211 290 1.91E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK58_RS18205 058584c32bb45cc2f23d2d6afcd47518 291 Gene3D G3DSA:2.60.120.10 200 291 2.2E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK58_RS18205 058584c32bb45cc2f23d2d6afcd47518 291 Pfam PF07883 Cupin domain 233 289 8.1E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK58_RS13455 b00f8f27a7196d597a3468301d8a6e9e 76 Pfam PF01695 IstB-like ATP binding protein 18 72 5.2E-9 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 AMK58_RS13325 1e0bc5807e31c6528876790a35c4ee53 183 Pfam PF10688 Bacterial inner membrane protein 16 171 6.4E-35 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV AMK58_RS05445 e7a0d07261a4025978b9c33c1a55b83c 134 Pfam PF06170 Protein of unknown function (DUF983) 41 124 1.9E-30 T 22-04-2016 IPR009325 Protein of unknown function DUF983 AMK58_RS10670 d8b8f3493c1f8e7754b4a340e8cc6406 76 Pfam PF11324 Protein of unknown function (DUF3126) 5 67 1.2E-27 T 22-04-2016 IPR021473 Protein of unknown function DUF3126 AMK58_RS02510 4c07ea929be2186d5089fa0407cf25f7 81 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 48 68 1.2E-7 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS02510 4c07ea929be2186d5089fa0407cf25f7 81 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 23 42 1.8E-7 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS02510 4c07ea929be2186d5089fa0407cf25f7 81 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 2 17 1.0E-4 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS08625 b49cfe587c41297aae0bb1d1aa22044c 150 Pfam PF03748 Flagellar basal body-associated protein FliL 56 149 2.3E-6 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMK58_RS06005 1db03515c82c13c4bc734a8c356ead44 108 Pfam PF11127 Protein of unknown function (DUF2892) 19 74 7.4E-11 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 AMK58_RS02080 408eeb2788002e9846f92a93354c1838 65 PANTHER PTHR28524 38 65 1.2E-19 T 22-04-2016 AMK58_RS02080 408eeb2788002e9846f92a93354c1838 65 Pfam PF07896 Protein of unknown function (DUF1674) 19 65 4.8E-15 T 22-04-2016 IPR012875 Protein of unknown function DUF1674 AMK58_RS10525 fe55a63dde89430def96b7a24110f00b 434 Pfam PF10082 Putative beta-barrel porin 2 43 434 4.5E-137 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 AMK58_RS02775 988fc77974e49ca289c31b6182330d41 111 SUPERFAMILY SSF50022 7 68 6.81E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS02775 988fc77974e49ca289c31b6182330d41 111 Gene3D G3DSA:2.102.10.10 5 66 5.7E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS02775 988fc77974e49ca289c31b6182330d41 111 Pfam PF00355 Rieske [2Fe-2S] domain 5 67 9.7E-8 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK58_RS09995 88cfce56302d6262f62058d27e68a7df 397 Pfam PF05762 VWA domain containing CoxE-like protein 191 279 1.5E-9 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like AMK58_RS04740 826e4ab445241df1a0886f6839039415 177 Gene3D G3DSA:1.25.40.10 41 155 5.2E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS09200 e74f7f4d1077974af7faa317344907ab 154 Pfam PF11164 Protein of unknown function (DUF2948) 6 148 6.0E-48 T 22-04-2016 IPR021335 Protein of unknown function DUF2948 AMK58_RS07505 d26f2ab5ff8b0ffd483e7279acbf1316 306 PANTHER PTHR30482:SF8 4 305 1.7E-113 T 22-04-2016 AMK58_RS07505 d26f2ab5ff8b0ffd483e7279acbf1316 306 PANTHER PTHR30482 4 305 1.7E-113 T 22-04-2016 AMK58_RS07505 d26f2ab5ff8b0ffd483e7279acbf1316 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 283 2.7E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK58_RS04315 f3a84ec7c9246b8410298fd5ef54bac7 189 Pfam PF11748 Protein of unknown function (DUF3306) 5 116 2.0E-30 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 AMK58_RS10130 5130c9c1313b247c3e0eb9f12673f5a3 112 PANTHER PTHR36569 12 91 1.3E-22 T 22-04-2016 AMK58_RS10130 5130c9c1313b247c3e0eb9f12673f5a3 112 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 60 4.8E-10 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS10130 5130c9c1313b247c3e0eb9f12673f5a3 112 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 18 38 2.7E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS10130 5130c9c1313b247c3e0eb9f12673f5a3 112 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 62 82 4.8E-10 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS10130 5130c9c1313b247c3e0eb9f12673f5a3 112 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 84 104 1.7E-10 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat AMK58_RS12270 eb3298982e9b5de162a1c3d6b583fb58 231 SUPERFAMILY SSF46565 159 219 4.19E-6 T 22-04-2016 IPR001623 DnaJ domain AMK58_RS04600 ea0c4d2d8f6dba275e95f9872430cf07 165 SUPERFAMILY SSF48452 27 148 3.32E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK58_RS13850 3964c4707e4501e9f5031e80332d4af1 171 Pfam PF09361 Phasin protein 62 154 1.4E-7 T 22-04-2016 IPR018968 Phasin AMK58_RS01785 005dac450385403257fd5868d745a495 382 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 33 54 - T 22-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 AMK58_RS01395 60ef050c34a9ae080b8007310f7b7862 147 Pfam PF06803 Protein of unknown function (DUF1232) 68 103 6.1E-12 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMK58_RS09960 31e8f322bf181c2e946f7803c0df5198 263 Pfam PF13490 Putative zinc-finger 12 36 4.7E-5 T 22-04-2016 IPR027383 Putative zinc-finger AMK58_RS17030 3414434c8745988c505cfe1aea1d262b 316 Pfam PF10139 Putative bacterial virulence factor 3 314 7.3E-79 T 22-04-2016 IPR017030 Virulence effector, SrfC AMK58_RS01855 e30fe260807194763828a1a17f069bd0 179 SUPERFAMILY SSF116734 1 120 8.34E-8 T 22-04-2016 AMK58_RS01890 fe61bb48cf298e7e58e2e01b944d2126 75 Pfam PF13441 YMGG-like Gly-zipper 27 70 3.0E-7 T 22-04-2016 IPR027367 YMGG-like Gly-zipper