AL072_RS00030	SM00387	Histidine kinase-like ATPases
AL072_RS00030	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00030	SM00448	cheY-homologous receiver domain
AL072_RS00050	SM00925	MltA specific insert domain
AL072_RS00065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS00065	SM00091	PAS domain
AL072_RS00065	SM00448	cheY-homologous receiver domain
AL072_RS00065	SM00911	HWE histidine kinase
AL072_RS00095	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL072_RS00120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS00120	SM00091	PAS domain
AL072_RS00120	SM00387	Histidine kinase-like ATPases
AL072_RS00120	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00125	SM00421	helix_turn_helix, Lux Regulon
AL072_RS00125	SM00448	cheY-homologous receiver domain
AL072_RS00130	SM00387	Histidine kinase-like ATPases
AL072_RS00130	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00185	SM00382	ATPases associated with a variety of cellular activities
AL072_RS00195	SM01126	AL072_RS00195
AL072_RS00200	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS00215	SM00267	diguanylate cyclase
AL072_RS00245	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
AL072_RS00255	SM01018	B12 binding domain
AL072_RS00275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL072_RS00310	SM00382	ATPases associated with a variety of cellular activities
AL072_RS00335	SM00861	Transketolase, pyrimidine binding domain
AL072_RS00345	SM00822	AL072_RS00345
AL072_RS00350	SM00829	Enoylreductase
AL072_RS00355	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS00365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS00375	SM00091	PAS domain
AL072_RS00375	SM00387	Histidine kinase-like ATPases
AL072_RS00375	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00395	SM00448	cheY-homologous receiver domain
AL072_RS00400	SM01329	AL072_RS00400
AL072_RS00435	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS00440	SM00382	ATPases associated with a variety of cellular activities
AL072_RS00440	SM00962	SRP54-type protein, GTPase domain
AL072_RS00440	SM00963	SRP54-type protein, helical bundle domain
AL072_RS00495	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS00495	SM00091	PAS domain
AL072_RS00495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00545	SM00448	cheY-homologous receiver domain
AL072_RS00565	SM00986	Uracil DNA glycosylase superfamily
AL072_RS00565	SM00987	UreE urease accessory protein, C-terminal domain 
AL072_RS00575	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL072_RS00585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS00620	SM01049	AL072_RS00620
AL072_RS00660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS00660	SM00387	Histidine kinase-like ATPases
AL072_RS00660	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00660	SM01358	AL072_RS00660
AL072_RS00665	SM01007	Class II Aldolase and Adducin N-terminal domain
AL072_RS00675	SM01126	AL072_RS00675
AL072_RS00695	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL072_RS00745	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS00775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS00780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS00795	SM00028	Tetratricopeptide repeats
AL072_RS00860	SM00387	Histidine kinase-like ATPases
AL072_RS00860	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00860	SM01079	AL072_RS00860
AL072_RS00865	SM00387	Histidine kinase-like ATPases
AL072_RS00865	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00865	SM00448	cheY-homologous receiver domain
AL072_RS00870	SM00387	Histidine kinase-like ATPases
AL072_RS00870	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00880	SM00448	cheY-homologous receiver domain
AL072_RS00915	SM00382	ATPases associated with a variety of cellular activities
AL072_RS00915	SM01086	C-terminal, D2-small domain, of ClpB protein
AL072_RS00925	SM00331	Sigma factor PP2C-like phosphatases
AL072_RS00925	SM00448	cheY-homologous receiver domain
AL072_RS00940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS00940	SM00091	PAS domain
AL072_RS00940	SM00387	Histidine kinase-like ATPases
AL072_RS00945	SM00073	Histidine Phosphotransfer domain
AL072_RS00945	SM00387	Histidine kinase-like ATPases
AL072_RS00945	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS00945	SM00448	cheY-homologous receiver domain
AL072_RS00960	SM00248	ankyrin repeats
AL072_RS00990	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01010	SM00091	PAS domain
AL072_RS01010	SM00387	Histidine kinase-like ATPases
AL072_RS01010	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS01010	SM00448	cheY-homologous receiver domain
AL072_RS01020	SM00052	Putative diguanylate phosphodiesterase
AL072_RS01020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS01020	SM00091	PAS domain
AL072_RS01020	SM00267	diguanylate cyclase
AL072_RS01020	SM01049	AL072_RS01020
AL072_RS01025	SM00998	Adenylosuccinate lyase C-terminus
AL072_RS01105	SM00448	cheY-homologous receiver domain
AL072_RS01120	SM00893	Electron transfer flavoprotein domain
AL072_RS01125	SM00893	Electron transfer flavoprotein domain
AL072_RS01130	SM00387	Histidine kinase-like ATPases
AL072_RS01130	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS01130	SM00448	cheY-homologous receiver domain
AL072_RS01190	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL072_RS01195	SM00478	endonuclease III
AL072_RS01260	SM00904	Riboflavin kinase
AL072_RS01325	SM00091	PAS domain
AL072_RS01325	SM00387	Histidine kinase-like ATPases
AL072_RS01325	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS01365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL072_RS01365	SM00895	AL072_RS01365
AL072_RS01420	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL072_RS01425	SM01374	AL072_RS01425
AL072_RS01445	SM00322	K homology RNA-binding domain
AL072_RS01460	SM01382	AL072_RS01460
AL072_RS01460	SM01383	AL072_RS01460
AL072_RS01480	SM01403	AL072_RS01480
AL072_RS01490	SM00838	Elongation factor G C-terminus
AL072_RS01490	SM00889	Elongation factor G, domain IV
AL072_RS01505	SM00663	RNA polymerase I subunit A N-terminus
AL072_RS01530	SM00649	Ribosomal protein L11/L12
AL072_RS01535	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL072_RS01535	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL072_RS01565	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL072_RS01595	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS01610	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01615	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01630	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01650	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01670	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AL072_RS01675	SM00248	ankyrin repeats
AL072_RS01705	SM00937	AL072_RS01705
AL072_RS01725	SM00646	AL072_RS01725
AL072_RS01775	SM01234	AL072_RS01775
AL072_RS01810	SM00382	ATPases associated with a variety of cellular activities
AL072_RS01810	SM00962	SRP54-type protein, GTPase domain
AL072_RS01810	SM00963	SRP54-type protein, helical bundle domain
AL072_RS01835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS01835	SM00267	diguanylate cyclase
AL072_RS01940	SM00448	cheY-homologous receiver domain
AL072_RS01940	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS01945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS01945	SM00387	Histidine kinase-like ATPases
AL072_RS01945	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS01970	SM00849	Metallo-beta-lactamase superfamily
AL072_RS01985	SM00387	Histidine kinase-like ATPases
AL072_RS01985	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS02005	SM00880	AL072_RS02005
AL072_RS02005	SM01118	AL072_RS02005
AL072_RS02020	SM00382	ATPases associated with a variety of cellular activities
AL072_RS02030	SM00493	AL072_RS02030
AL072_RS02040	SM00507	HNH nucleases
AL072_RS02090	SM00450	Rhodanese Homology Domain
AL072_RS02095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL072_RS02210	SM00852	Probable molybdopterin binding domain
AL072_RS02240	SM00341	Helicase and RNase D C-terminal
AL072_RS02240	SM00487	DEAD-like helicases superfamily
AL072_RS02240	SM00490	helicase superfamily c-terminal domain
AL072_RS02240	SM00956	AL072_RS02240
AL072_RS02260	SM00957	SecA DEAD-like domain
AL072_RS02260	SM00958	SecA preprotein cross-linking domain
AL072_RS02275	SM00052	Putative diguanylate phosphodiesterase
AL072_RS02275	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS02275	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS02275	SM00091	PAS domain
AL072_RS02275	SM00267	diguanylate cyclase
AL072_RS02285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL072_RS02325	SM00881	CoA binding domain
AL072_RS02330	SM00861	Transketolase, pyrimidine binding domain
AL072_RS02350	SM00091	PAS domain
AL072_RS02385	SM00487	DEAD-like helicases superfamily
AL072_RS02385	SM00490	helicase superfamily c-terminal domain
AL072_RS02385	SM00847	Helicase associated domain (HA2)  Add an annotation
AL072_RS02395	SM00052	Putative diguanylate phosphodiesterase
AL072_RS02395	SM00267	diguanylate cyclase
AL072_RS02410	SM00316	Ribosomal protein S1-like RNA-binding domain
AL072_RS02540	SM00382	ATPases associated with a variety of cellular activities
AL072_RS02590	SM00382	ATPases associated with a variety of cellular activities
AL072_RS02615	SM00487	DEAD-like helicases superfamily
AL072_RS02625	SM00028	Tetratricopeptide repeats
AL072_RS02630	SM00382	ATPases associated with a variety of cellular activities
AL072_RS02720	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL072_RS02740	SM00382	ATPases associated with a variety of cellular activities
AL072_RS02740	SM00843	AL072_RS02740
AL072_RS02755	SM00387	Histidine kinase-like ATPases
AL072_RS02755	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS02760	SM00387	Histidine kinase-like ATPases
AL072_RS02760	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS02780	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL072_RS02795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS02795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS02810	SM00851	MGS-like domain
AL072_RS02810	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL072_RS02825	SM00344	helix_turn_helix ASNC type
AL072_RS02865	SM00052	Putative diguanylate phosphodiesterase
AL072_RS02865	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS02865	SM00091	PAS domain
AL072_RS02865	SM00267	diguanylate cyclase
AL072_RS02905	SM00838	Elongation factor G C-terminus
AL072_RS02920	SM00870	AL072_RS02920
AL072_RS02940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS02945	SM00448	cheY-homologous receiver domain
AL072_RS02950	SM00873	B3/4 domain
AL072_RS02950	SM00874	tRNA synthetase B5 domain
AL072_RS02950	SM00896	Ferredoxin-fold anticodon binding domain
AL072_RS02995	SM00893	Electron transfer flavoprotein domain
AL072_RS03000	SM00893	Electron transfer flavoprotein domain
AL072_RS03010	SM00448	cheY-homologous receiver domain
AL072_RS03010	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS03015	SM00091	PAS domain
AL072_RS03015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS03015	SM00387	Histidine kinase-like ATPases
AL072_RS03015	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS03015	SM00448	cheY-homologous receiver domain
AL072_RS03015	SM01049	AL072_RS03015
AL072_RS03035	SM00091	PAS domain
AL072_RS03035	SM00387	Histidine kinase-like ATPases
AL072_RS03035	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS03155	SM00448	cheY-homologous receiver domain
AL072_RS03155	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS03165	SM00849	Metallo-beta-lactamase superfamily
AL072_RS03175	SM00855	Phosphoglycerate mutase family
AL072_RS03190	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS03225	SM00857	Resolvase, N terminal domain
AL072_RS03255	SM00857	Resolvase, N terminal domain
AL072_RS03270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL072_RS03270	SM00382	ATPases associated with a variety of cellular activities
AL072_RS03280	SM00849	Metallo-beta-lactamase superfamily
AL072_RS03350	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS03370	SM00857	Resolvase, N terminal domain
AL072_RS03430	SM01126	AL072_RS03430
AL072_RS03435	SM00487	DEAD-like helicases superfamily
AL072_RS03465	SM01152	AL072_RS03465
AL072_RS03485	SM00881	CoA binding domain
AL072_RS03525	SM00986	Uracil DNA glycosylase superfamily
AL072_RS03525	SM00987	UreE urease accessory protein, C-terminal domain 
AL072_RS03535	SM00226	Low molecular weight phosphatase family
AL072_RS03540	SM00100	Cyclic nucleotide-monophosphate binding domain
AL072_RS03540	SM00387	Histidine kinase-like ATPases
AL072_RS03550	SM00342	helix_turn_helix, arabinose operon control protein
AL072_RS03610	SM00474	3'-5' exonuclease
AL072_RS03615	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS03630	SM00382	ATPases associated with a variety of cellular activities
AL072_RS03675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS03685	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS03700	SM00937	AL072_RS03700
AL072_RS03730	SM00382	ATPases associated with a variety of cellular activities
AL072_RS03730	SM01086	C-terminal, D2-small domain, of ClpB protein
AL072_RS03775	SM00100	Cyclic nucleotide-monophosphate binding domain
AL072_RS03775	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS03825	SM00052	Putative diguanylate phosphodiesterase
AL072_RS03825	SM00091	PAS domain
AL072_RS03825	SM00267	diguanylate cyclase
AL072_RS03850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS03855	SM00448	cheY-homologous receiver domain
AL072_RS03905	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL072_RS03905	SM01232	AL072_RS03905
AL072_RS03925	SM00382	ATPases associated with a variety of cellular activities
AL072_RS03925	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL072_RS03935	SM00382	ATPases associated with a variety of cellular activities
AL072_RS03940	SM00978	AL072_RS03940
AL072_RS03945	SM00363	S4 RNA-binding domain
AL072_RS03950	SM00490	helicase superfamily c-terminal domain
AL072_RS03960	SM00448	cheY-homologous receiver domain
AL072_RS03960	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS03965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS03965	SM00387	Histidine kinase-like ATPases
AL072_RS03965	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS03995	SM00028	Tetratricopeptide repeats
AL072_RS04015	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS04020	SM00996	S-adenosyl-L-homocysteine hydrolase
AL072_RS04020	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AL072_RS04105	SM00448	cheY-homologous receiver domain
AL072_RS04110	SM00357	Cold shock protein domain
AL072_RS04115	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04115	SM00448	cheY-homologous receiver domain
AL072_RS04130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS04130	SM00387	Histidine kinase-like ATPases
AL072_RS04130	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS04130	SM00448	cheY-homologous receiver domain
AL072_RS04135	SM00091	PAS domain
AL072_RS04135	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS04170	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS04190	SM00271	DnaJ molecular chaperone homology domain
AL072_RS04200	SM00327	von Willebrand factor (vWF) type A domain
AL072_RS04205	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AL072_RS04215	SM00318	Staphylococcal nuclease homologues
AL072_RS04255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS04255	SM00387	Histidine kinase-like ATPases
AL072_RS04255	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS04260	SM00448	cheY-homologous receiver domain
AL072_RS04260	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS04310	SM00563	Phosphate acyltransferases
AL072_RS04365	SM00271	DnaJ molecular chaperone homology domain
AL072_RS04370	SM00267	diguanylate cyclase
AL072_RS04385	SM00897	FIST N domain
AL072_RS04385	SM01204	AL072_RS04385
AL072_RS04395	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04415	SM00448	cheY-homologous receiver domain
AL072_RS04415	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS04420	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04440	SM00387	Histidine kinase-like ATPases
AL072_RS04440	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS04445	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS04455	SM00919	Malic enzyme, NAD binding domain
AL072_RS04455	SM01274	AL072_RS04455
AL072_RS04475	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS04485	SM00470	ParB-like nuclease domain
AL072_RS04500	SM01228	AL072_RS04500
AL072_RS04530	SM00829	Enoylreductase
AL072_RS04535	SM00479	AL072_RS04535
AL072_RS04575	SM00357	Cold shock protein domain
AL072_RS04575	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04575	SM00959	Rho termination factor, N-terminal domain
AL072_RS04590	SM00978	AL072_RS04590
AL072_RS04595	SM00925	MltA specific insert domain
AL072_RS04600	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04600	SM01086	C-terminal, D2-small domain, of ClpB protein
AL072_RS04650	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS04655	SM00463	Small MutS-related domain
AL072_RS04665	SM00028	Tetratricopeptide repeats
AL072_RS04715	SM00822	AL072_RS04715
AL072_RS04720	SM00316	Ribosomal protein S1-like RNA-binding domain
AL072_RS04720	SM00322	K homology RNA-binding domain
AL072_RS04725	SM01387	AL072_RS04725
AL072_RS04750	SM00316	Ribosomal protein S1-like RNA-binding domain
AL072_RS04750	SM00322	K homology RNA-binding domain
AL072_RS04775	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS04785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS04785	SM01091	Transporter associated domain
AL072_RS04800	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS04850	SM00478	endonuclease III
AL072_RS04850	SM00525	AL072_RS04850
AL072_RS04865	SM00825	Beta-ketoacyl synthase
AL072_RS04900	SM00932	Scaffold protein Nfu/NifU N terminal
AL072_RS04910	SM00448	cheY-homologous receiver domain
AL072_RS04930	SM00382	ATPases associated with a variety of cellular activities
AL072_RS04950	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS05010	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS05010	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL072_RS05015	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05025	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05090	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS05100	SM00387	Histidine kinase-like ATPases
AL072_RS05100	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS05105	SM00448	cheY-homologous receiver domain
AL072_RS05105	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS05120	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS05130	SM00387	Histidine kinase-like ATPases
AL072_RS05130	SM00433	TopoisomeraseII
AL072_RS05135	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05140	SM00480	DNA polymerase III beta subunit
AL072_RS05155	SM00028	Tetratricopeptide repeats
AL072_RS05280	SM00052	Putative diguanylate phosphodiesterase
AL072_RS05280	SM00091	PAS domain
AL072_RS05280	SM00267	diguanylate cyclase
AL072_RS05320	SM00838	Elongation factor G C-terminus
AL072_RS05320	SM00889	Elongation factor G, domain IV
AL072_RS05325	SM01049	AL072_RS05325
AL072_RS05330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS05330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS05340	SM00387	Histidine kinase-like ATPases
AL072_RS05370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS05385	SM00411	bacterial (prokaryotic) histone like domain
AL072_RS05400	SM00387	Histidine kinase-like ATPases
AL072_RS05415	SM00822	AL072_RS05415
AL072_RS05445	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS05500	SM00798	AICARFT/IMPCHase bienzyme
AL072_RS05500	SM00851	MGS-like domain
AL072_RS05515	SM01058	CarD-like/TRCF domain
AL072_RS05535	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS05555	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS05560	SM00054	EF-hand, calcium binding motif
AL072_RS05575	SM01144	AL072_RS05575
AL072_RS05590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS05590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS05590	SM01358	AL072_RS05590
AL072_RS05595	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05605	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL072_RS05615	SM00267	diguanylate cyclase
AL072_RS05710	SM00100	Cyclic nucleotide-monophosphate binding domain
AL072_RS05710	SM00419	helix_turn_helix, cAMP Regulatory protein
AL072_RS05730	SM00883	Chaperonin 10 Kd subunit
AL072_RS05750	SM00421	helix_turn_helix, Lux Regulon
AL072_RS05750	SM00448	cheY-homologous receiver domain
AL072_RS05765	SM00829	Enoylreductase
AL072_RS05780	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05785	SM00052	Putative diguanylate phosphodiesterase
AL072_RS05785	SM00267	diguanylate cyclase
AL072_RS05800	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05805	SM00382	ATPases associated with a variety of cellular activities
AL072_RS05900	SM00387	Histidine kinase-like ATPases
AL072_RS05900	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS05905	SM00387	Histidine kinase-like ATPases
AL072_RS05920	SM00869	Autotransporter beta-domain
AL072_RS05965	SM00382	ATPases associated with a variety of cellular activities
AL072_RS06000	SM00710	Parallel beta-helix repeats
AL072_RS06050	SM00481	DNA polymerase alpha chain like domain
AL072_RS06065	SM00267	diguanylate cyclase
AL072_RS06065	SM00448	cheY-homologous receiver domain
AL072_RS06125	SM00382	ATPases associated with a variety of cellular activities
AL072_RS06195	SM00448	cheY-homologous receiver domain
AL072_RS06200	SM00763	PrkA AAA domain
AL072_RS06305	SM00448	cheY-homologous receiver domain
AL072_RS06305	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS06365	SM01126	AL072_RS06365
AL072_RS06430	SM00487	DEAD-like helicases superfamily
AL072_RS06430	SM00490	helicase superfamily c-terminal domain
AL072_RS06460	SM00382	ATPases associated with a variety of cellular activities
AL072_RS06480	SM00487	DEAD-like helicases superfamily
AL072_RS06480	SM00490	helicase superfamily c-terminal domain
AL072_RS06555	SM00052	Putative diguanylate phosphodiesterase
AL072_RS06565	SM00966	SpoVT / AbrB like domain 
AL072_RS06570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL072_RS06600	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS06615	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS06615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS06650	SM00382	ATPases associated with a variety of cellular activities
AL072_RS06655	SM00382	ATPases associated with a variety of cellular activities
AL072_RS06665	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS06665	SM00091	PAS domain
AL072_RS06665	SM00387	Histidine kinase-like ATPases
AL072_RS06665	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS06665	SM00448	cheY-homologous receiver domain
AL072_RS06685	SM00357	Cold shock protein domain
AL072_RS06695	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS06720	SM00155	Phospholipase D. Active site motifs.
AL072_RS06740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS06740	SM00091	PAS domain
AL072_RS06740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS06740	SM00387	Histidine kinase-like ATPases
AL072_RS06740	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS06740	SM00448	cheY-homologous receiver domain
AL072_RS06755	SM00479	AL072_RS06755
AL072_RS06820	SM00850	LytTr DNA-binding domain
AL072_RS06835	SM00091	PAS domain
AL072_RS06835	SM00387	Histidine kinase-like ATPases
AL072_RS06835	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS06835	SM00448	cheY-homologous receiver domain
AL072_RS06840	SM00267	diguanylate cyclase
AL072_RS06840	SM00448	cheY-homologous receiver domain
AL072_RS06845	SM00852	Probable molybdopterin binding domain
AL072_RS06850	SM00852	Probable molybdopterin binding domain
AL072_RS06870	SM00917	LeuA allosteric (dimerisation) domain
AL072_RS06895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS06895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS06900	SM00491	AL072_RS06900
AL072_RS06915	SM00487	DEAD-like helicases superfamily
AL072_RS06915	SM00490	helicase superfamily c-terminal domain
AL072_RS06925	SM00855	Phosphoglycerate mutase family
AL072_RS06970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL072_RS07055	SM00855	Phosphoglycerate mutase family
AL072_RS07065	SM00357	Cold shock protein domain
AL072_RS07070	SM00100	Cyclic nucleotide-monophosphate binding domain
AL072_RS07070	SM00419	helix_turn_helix, cAMP Regulatory protein
AL072_RS07115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS07130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS07160	SM00363	S4 RNA-binding domain
AL072_RS07160	SM01390	AL072_RS07160
AL072_RS07165	SM00331	Sigma factor PP2C-like phosphatases
AL072_RS07165	SM00448	cheY-homologous receiver domain
AL072_RS07170	SM00448	cheY-homologous receiver domain
AL072_RS07185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07190	SM00448	cheY-homologous receiver domain
AL072_RS07200	SM00138	Methyltransferase, chemotaxis proteins 
AL072_RS07205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS07205	SM01358	AL072_RS07205
AL072_RS07210	SM00260	Two component signalling adaptor domain
AL072_RS07215	SM00073	Histidine Phosphotransfer domain
AL072_RS07215	SM00260	Two component signalling adaptor domain
AL072_RS07215	SM00387	Histidine kinase-like ATPases
AL072_RS07215	SM01231	AL072_RS07215
AL072_RS07220	SM00448	cheY-homologous receiver domain
AL072_RS07270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS07270	SM00245	tail specific protease
AL072_RS07285	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL072_RS07330	SM00382	ATPases associated with a variety of cellular activities
AL072_RS07390	SM00822	AL072_RS07390
AL072_RS07410	SM00464	Found in ATP-dependent protease La (LON)
AL072_RS07440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS07450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS07450	SM01358	AL072_RS07450
AL072_RS07505	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS07515	SM00840	AL072_RS07515
AL072_RS07535	SM01211	AL072_RS07535
AL072_RS07560	SM00448	cheY-homologous receiver domain
AL072_RS07620	SM00450	Rhodanese Homology Domain
AL072_RS07625	SM00448	cheY-homologous receiver domain
AL072_RS07630	SM00091	PAS domain
AL072_RS07630	SM00387	Histidine kinase-like ATPases
AL072_RS07630	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS07635	SM00091	PAS domain
AL072_RS07635	SM00387	Histidine kinase-like ATPases
AL072_RS07635	SM00448	cheY-homologous receiver domain
AL072_RS07640	SM00387	Histidine kinase-like ATPases
AL072_RS07640	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS07650	SM00091	PAS domain
AL072_RS07650	SM00479	AL072_RS07650
AL072_RS07655	SM00448	cheY-homologous receiver domain
AL072_RS07735	SM00240	Forkhead associated domain
AL072_RS07740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS07740	SM00382	ATPases associated with a variety of cellular activities
AL072_RS07755	SM00382	ATPases associated with a variety of cellular activities
AL072_RS07770	SM00387	Histidine kinase-like ATPases
AL072_RS07770	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS07770	SM00448	cheY-homologous receiver domain
AL072_RS07790	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS07800	SM01400	AL072_RS07800
AL072_RS07825	SM01049	AL072_RS07825
AL072_RS07830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS07835	SM00917	LeuA allosteric (dimerisation) domain
AL072_RS07855	SM00479	AL072_RS07855
AL072_RS07870	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS07870	SM00245	tail specific protease
AL072_RS07875	SM00316	Ribosomal protein S1-like RNA-binding domain
AL072_RS07875	SM00955	AL072_RS07875
AL072_RS07965	SM00421	helix_turn_helix, Lux Regulon
AL072_RS07965	SM00448	cheY-homologous receiver domain
AL072_RS07970	SM00421	helix_turn_helix, Lux Regulon
AL072_RS07970	SM00448	cheY-homologous receiver domain
AL072_RS08000	SM00988	UreE urease accessory protein, N-terminal domain
AL072_RS08215	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL072_RS08220	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL072_RS08270	SM00849	Metallo-beta-lactamase superfamily
AL072_RS08310	SM00382	ATPases associated with a variety of cellular activities
AL072_RS08355	SM00382	ATPases associated with a variety of cellular activities
AL072_RS08410	SM01118	AL072_RS08410
AL072_RS08415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS08415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS08415	SM01358	AL072_RS08415
AL072_RS08465	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL072_RS08465	SM01240	AL072_RS08465
AL072_RS08475	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL072_RS08475	SM00292	breast cancer carboxy-terminal domain
AL072_RS08475	SM00532	Ligase N family
AL072_RS08490	SM00864	Tubulin/FtsZ family, GTPase domain
AL072_RS08490	SM00865	Tubulin/FtsZ family, C-terminal domain
AL072_RS08495	SM00842	Cell division protein FtsA
AL072_RS08580	SM00644	AL072_RS08580
AL072_RS08590	SM00382	ATPases associated with a variety of cellular activities
AL072_RS08600	SM00271	DnaJ molecular chaperone homology domain
AL072_RS08615	SM00382	ATPases associated with a variety of cellular activities
AL072_RS08620	SM00267	diguanylate cyclase
AL072_RS08690	SM00487	DEAD-like helicases superfamily
AL072_RS08690	SM00490	helicase superfamily c-terminal domain
AL072_RS08700	SM01126	AL072_RS08700
AL072_RS08750	SM00857	Resolvase, N terminal domain
AL072_RS08845	SM00052	Putative diguanylate phosphodiesterase
AL072_RS08885	SM00028	Tetratricopeptide repeats
AL072_RS08895	SM01209	AL072_RS08895
AL072_RS08895	SM01210	AL072_RS08895
AL072_RS08900	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS08900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS08910	SM00363	S4 RNA-binding domain
AL072_RS08930	SM00642	Alpha-amylase domain
AL072_RS08955	SM00853	MutL C terminal dimerisation domain
AL072_RS08955	SM01340	AL072_RS08955
AL072_RS08985	SM00421	helix_turn_helix, Lux Regulon
AL072_RS08985	SM00448	cheY-homologous receiver domain
AL072_RS08990	SM00421	helix_turn_helix, Lux Regulon
AL072_RS08990	SM00448	cheY-homologous receiver domain
AL072_RS09020	SM00448	cheY-homologous receiver domain
AL072_RS09070	SM00841	Elongation factor P, C-terminal
AL072_RS09070	SM01185	AL072_RS09070
AL072_RS09095	SM01133	AL072_RS09095
AL072_RS09115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS09115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS09115	SM01049	AL072_RS09115
AL072_RS09120	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL072_RS09125	SM00861	Transketolase, pyrimidine binding domain
AL072_RS09150	SM00854	Bacterial capsule synthesis protein PGA_cap
AL072_RS09165	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL072_RS09170	SM00382	ATPases associated with a variety of cellular activities
AL072_RS09205	SM00028	Tetratricopeptide repeats
AL072_RS09215	SM00382	ATPases associated with a variety of cellular activities
AL072_RS09240	SM00271	DnaJ molecular chaperone homology domain
AL072_RS09260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS09265	SM00849	Metallo-beta-lactamase superfamily
AL072_RS09275	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS09275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS09290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS09290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS09415	SM00411	bacterial (prokaryotic) histone like domain
AL072_RS09420	SM00422	helix_turn_helix, mercury resistance
AL072_RS09480	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS09515	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS09620	SM01126	AL072_RS09620
AL072_RS09745	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS09785	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL072_RS09795	SM00400	zinc finger
AL072_RS09795	SM00493	AL072_RS09795
AL072_RS09810	SM00028	Tetratricopeptide repeats
AL072_RS09845	SM00642	Alpha-amylase domain
AL072_RS09885	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS09915	SM00878	Biotin carboxylase C-terminal domain
AL072_RS09925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS09930	SM00448	cheY-homologous receiver domain
AL072_RS09935	SM00448	cheY-homologous receiver domain
AL072_RS09960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS09965	SM00448	cheY-homologous receiver domain
AL072_RS09965	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS09970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS09970	SM00387	Histidine kinase-like ATPases
AL072_RS09970	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS09995	SM00448	cheY-homologous receiver domain
AL072_RS10000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS10000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS10025	SM00387	Histidine kinase-like ATPases
AL072_RS10025	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS10025	SM00448	cheY-homologous receiver domain
AL072_RS10040	SM00852	Probable molybdopterin binding domain
AL072_RS10060	SM01359	AL072_RS10060
AL072_RS10060	SM01360	AL072_RS10060
AL072_RS10090	SM00487	DEAD-like helicases superfamily
AL072_RS10090	SM00490	helicase superfamily c-terminal domain
AL072_RS10135	SM00829	Enoylreductase
AL072_RS10165	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS10215	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10220	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10270	SM01409	AL072_RS10270
AL072_RS10275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS10275	SM00954	Region found in RelA / SpoT proteins
AL072_RS10295	SM00358	Double-stranded RNA binding motif
AL072_RS10295	SM00535	Ribonuclease III family
AL072_RS10320	SM00235	Zinc-dependent metalloprotease
AL072_RS10350	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AL072_RS10410	SM00091	PAS domain
AL072_RS10410	SM00387	Histidine kinase-like ATPases
AL072_RS10410	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS10410	SM00448	cheY-homologous receiver domain
AL072_RS10415	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10445	SM00487	DEAD-like helicases superfamily
AL072_RS10445	SM00490	helicase superfamily c-terminal domain
AL072_RS10445	SM00982	AL072_RS10445
AL072_RS10445	SM01058	CarD-like/TRCF domain
AL072_RS10485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS10565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS10585	SM00858	AL072_RS10585
AL072_RS10620	SM00434	DNA Topoisomerase IV
AL072_RS10630	SM00052	Putative diguanylate phosphodiesterase
AL072_RS10630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS10630	SM00091	PAS domain
AL072_RS10630	SM00267	diguanylate cyclase
AL072_RS10660	SM00849	Metallo-beta-lactamase superfamily
AL072_RS10685	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL072_RS10735	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10740	SM00562	AL072_RS10740
AL072_RS10750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS10750	SM00091	PAS domain
AL072_RS10750	SM00387	Histidine kinase-like ATPases
AL072_RS10750	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS10750	SM00448	cheY-homologous receiver domain
AL072_RS10755	SM00448	cheY-homologous receiver domain
AL072_RS10780	SM00220	Serine/Threonine protein kinases, catalytic domain
AL072_RS10800	SM00671	Sel1-like repeats.
AL072_RS10865	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10865	SM01086	C-terminal, D2-small domain, of ClpB protein
AL072_RS10885	SM00240	Forkhead associated domain
AL072_RS10925	SM00331	Sigma factor PP2C-like phosphatases
AL072_RS10935	SM00448	cheY-homologous receiver domain
AL072_RS10940	SM00749	bacterial OsmY and nodulation domain
AL072_RS10965	SM00091	PAS domain
AL072_RS10965	SM00387	Histidine kinase-like ATPases
AL072_RS10970	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS10970	SM00387	Histidine kinase-like ATPases
AL072_RS10970	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS10970	SM00448	cheY-homologous receiver domain
AL072_RS10975	SM00382	ATPases associated with a variety of cellular activities
AL072_RS10985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS10985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS11000	SM00448	cheY-homologous receiver domain
AL072_RS11060	SM00052	Putative diguanylate phosphodiesterase
AL072_RS11070	SM01001	AIR carboxylase
AL072_RS11100	SM00028	Tetratricopeptide repeats
AL072_RS11110	SM00947	Carbonic anhydrase
AL072_RS11125	SM00829	Enoylreductase
AL072_RS11190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS11190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS11195	SM00421	helix_turn_helix, Lux Regulon
AL072_RS11200	SM00421	helix_turn_helix, Lux Regulon
AL072_RS11200	SM00448	cheY-homologous receiver domain
AL072_RS11210	SM00564	beta-propeller repeat
AL072_RS11215	SM00382	ATPases associated with a variety of cellular activities
AL072_RS11235	SM00382	ATPases associated with a variety of cellular activities
AL072_RS11260	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL072_RS11260	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL072_RS11280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS11290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL072_RS11300	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL072_RS11330	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL072_RS11330	SM00267	diguanylate cyclase
AL072_RS11340	SM01329	AL072_RS11340
AL072_RS11365	SM00244	prohibitin homologues
AL072_RS11375	SM01329	AL072_RS11375
AL072_RS11410	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL072_RS11415	SM00822	AL072_RS11415
AL072_RS11420	SM00823	Phosphopantetheine attachment site
AL072_RS11425	SM00825	Beta-ketoacyl synthase
AL072_RS11455	SM00487	DEAD-like helicases superfamily
AL072_RS11455	SM00490	helicase superfamily c-terminal domain
AL072_RS11470	SM00100	Cyclic nucleotide-monophosphate binding domain
AL072_RS11470	SM00419	helix_turn_helix, cAMP Regulatory protein
AL072_RS11490	SM00387	Histidine kinase-like ATPases
AL072_RS11495	SM00387	Histidine kinase-like ATPases
AL072_RS11495	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS11500	SM00448	cheY-homologous receiver domain
AL072_RS11500	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS11510	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS11515	SM00382	ATPases associated with a variety of cellular activities
AL072_RS11520	SM00382	ATPases associated with a variety of cellular activities
AL072_RS11530	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS11545	SM00387	Histidine kinase-like ATPases
AL072_RS11545	SM00433	TopoisomeraseII
AL072_RS11565	SM00487	DEAD-like helicases superfamily
AL072_RS11565	SM00490	helicase superfamily c-terminal domain
AL072_RS11585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS11585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS11585	SM01049	AL072_RS11585
AL072_RS11595	SM00072	Guanylate kinase homologues.
AL072_RS11605	SM00822	AL072_RS11605
AL072_RS11615	SM00341	Helicase and RNase D C-terminal
AL072_RS11615	SM00474	3'-5' exonuclease
AL072_RS11620	SM00852	Probable molybdopterin binding domain
AL072_RS11665	SM00834	Putative regulatory protein
AL072_RS11675	SM01130	AL072_RS11675
AL072_RS11700	SM00342	helix_turn_helix, arabinose operon control protein
AL072_RS11710	SM01004	Delta-aminolevulinic acid dehydratase
AL072_RS11730	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS11770	SM00028	Tetratricopeptide repeats
AL072_RS11805	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL072_RS11820	SM00387	Histidine kinase-like ATPases
AL072_RS11820	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS11825	SM00448	cheY-homologous receiver domain
AL072_RS11830	SM00460	Transglutaminase/protease-like homologues
AL072_RS11840	SM00460	Transglutaminase/protease-like homologues
AL072_RS11885	SM00028	Tetratricopeptide repeats
AL072_RS11935	SM00257	Lysin motif
AL072_RS11945	SM01323	AL072_RS11945
AL072_RS12005	SM00880	AL072_RS12005
AL072_RS12005	SM01118	AL072_RS12005
AL072_RS12010	SM00855	Phosphoglycerate mutase family
AL072_RS12085	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS12110	SM00448	cheY-homologous receiver domain
AL072_RS12140	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12200	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12200	SM00448	cheY-homologous receiver domain
AL072_RS12205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS12205	SM00387	Histidine kinase-like ATPases
AL072_RS12205	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS12210	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12210	SM00448	cheY-homologous receiver domain
AL072_RS12215	SM00091	PAS domain
AL072_RS12215	SM00387	Histidine kinase-like ATPases
AL072_RS12215	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS12250	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS12265	SM00830	Chorismate mutase type II
AL072_RS12275	SM00861	Transketolase, pyrimidine binding domain
AL072_RS12295	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12320	SM00448	cheY-homologous receiver domain
AL072_RS12325	SM00318	Staphylococcal nuclease homologues
AL072_RS12335	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AL072_RS12340	SM00052	Putative diguanylate phosphodiesterase
AL072_RS12400	SM00852	Probable molybdopterin binding domain
AL072_RS12420	SM00465	GIY-YIG type nucleases (URI domain)
AL072_RS12460	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12510	SM01207	AL072_RS12510
AL072_RS12555	SM00411	bacterial (prokaryotic) histone like domain
AL072_RS12570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS12595	SM00671	Sel1-like repeats.
AL072_RS12600	SM00487	DEAD-like helicases superfamily
AL072_RS12600	SM00490	helicase superfamily c-terminal domain
AL072_RS12670	SM00935	Outer membrane protein (OmpH-like)
AL072_RS12680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS12770	SM00704	CDGSH-type zinc finger. Function unknown.
AL072_RS12825	SM00434	DNA Topoisomerase IV
AL072_RS12870	SM00382	ATPases associated with a variety of cellular activities
AL072_RS12915	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS12925	SM00448	cheY-homologous receiver domain
AL072_RS12925	SM00862	Transcriptional regulatory protein, C terminal
AL072_RS12930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS12930	SM00387	Histidine kinase-like ATPases
AL072_RS12930	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS12935	SM00421	helix_turn_helix, Lux Regulon
AL072_RS12935	SM00448	cheY-homologous receiver domain
AL072_RS12940	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS12945	SM00244	prohibitin homologues
AL072_RS12950	SM00244	prohibitin homologues
AL072_RS12965	SM00822	AL072_RS12965
AL072_RS12990	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS12995	SM00073	Histidine Phosphotransfer domain
AL072_RS12995	SM00091	PAS domain
AL072_RS12995	SM00387	Histidine kinase-like ATPases
AL072_RS12995	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS12995	SM00448	cheY-homologous receiver domain
AL072_RS13000	SM00448	cheY-homologous receiver domain
AL072_RS13005	SM00331	Sigma factor PP2C-like phosphatases
AL072_RS13005	SM00448	cheY-homologous receiver domain
AL072_RS13015	SM00091	PAS domain
AL072_RS13015	SM00267	diguanylate cyclase
AL072_RS13035	SM00091	PAS domain
AL072_RS13035	SM00387	Histidine kinase-like ATPases
AL072_RS13035	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS13035	SM00448	cheY-homologous receiver domain
AL072_RS13050	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13080	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL072_RS13080	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL072_RS13105	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS13135	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS13170	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13175	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL072_RS13230	SM00450	Rhodanese Homology Domain
AL072_RS13260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL072_RS13275	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL072_RS13280	SM00450	Rhodanese Homology Domain
AL072_RS13310	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13325	SM00062	Bacterial periplasmic substrate-binding proteins
AL072_RS13360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS13360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS13385	SM00903	Flavin reductase like domain
AL072_RS13410	SM00422	helix_turn_helix, mercury resistance
AL072_RS13420	SM00893	Electron transfer flavoprotein domain
AL072_RS13425	SM00893	Electron transfer flavoprotein domain
AL072_RS13435	SM00387	Histidine kinase-like ATPases
AL072_RS13435	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS13435	SM00448	cheY-homologous receiver domain
AL072_RS13480	SM00671	Sel1-like repeats.
AL072_RS13510	SM00838	Elongation factor G C-terminus
AL072_RS13520	SM01091	Transporter associated domain
AL072_RS13540	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13545	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13555	SM00052	Putative diguanylate phosphodiesterase
AL072_RS13555	SM00091	PAS domain
AL072_RS13555	SM00267	diguanylate cyclase
AL072_RS13645	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL072_RS13645	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL072_RS13645	SM00493	AL072_RS13645
AL072_RS13655	SM00881	CoA binding domain
AL072_RS13675	SM00650	Ribosomal RNA adenine dimethylases
AL072_RS13690	SM00342	helix_turn_helix, arabinose operon control protein
AL072_RS13700	SM00487	DEAD-like helicases superfamily
AL072_RS13700	SM00490	helicase superfamily c-terminal domain
AL072_RS13705	SM00014	Acid phosphatase homologues
AL072_RS13710	SM00267	diguanylate cyclase
AL072_RS13710	SM00448	cheY-homologous receiver domain
AL072_RS13715	SM00448	cheY-homologous receiver domain
AL072_RS13720	SM00267	diguanylate cyclase
AL072_RS13740	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13765	SM00662	RNA polymerases D
AL072_RS13785	SM00028	Tetratricopeptide repeats
AL072_RS13790	SM00838	Elongation factor G C-terminus
AL072_RS13790	SM00889	Elongation factor G, domain IV
AL072_RS13805	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL072_RS13805	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL072_RS13805	SM00493	AL072_RS13805
AL072_RS13810	SM00421	helix_turn_helix, Lux Regulon
AL072_RS13845	SM00411	bacterial (prokaryotic) histone like domain
AL072_RS13850	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13850	SM00464	Found in ATP-dependent protease La (LON)
AL072_RS13855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS13855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS13860	SM00382	ATPases associated with a variety of cellular activities
AL072_RS13860	SM00994	ClpX C4-type zinc finger
AL072_RS13860	SM01086	C-terminal, D2-small domain, of ClpB protein
AL072_RS13895	SM00938	Nitrogen regulatory protein P-II
AL072_RS13900	SM01230	AL072_RS13900
AL072_RS13930	SM00857	Resolvase, N terminal domain
AL072_RS13975	SM00732	Likely ribonuclease with RNase H fold.
AL072_RS13980	SM00028	Tetratricopeptide repeats
AL072_RS14025	SM00487	DEAD-like helicases superfamily
AL072_RS14025	SM00490	helicase superfamily c-terminal domain
AL072_RS14490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS14570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS14815	SM00387	Histidine kinase-like ATPases
AL072_RS14815	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS14830	SM00387	Histidine kinase-like ATPases
AL072_RS14905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL072_RS14905	SM00091	PAS domain
AL072_RS16240	SM00382	ATPases associated with a variety of cellular activities
AL072_RS16555	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL072_RS16565	SM00851	MGS-like domain
AL072_RS16670	SM00091	PAS domain
AL072_RS16670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS16670	SM00387	Histidine kinase-like ATPases
AL072_RS16670	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS17480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS17545	SM00996	S-adenosyl-L-homocysteine hydrolase
AL072_RS17545	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AL072_RS17915	SM00530	Helix-turn-helix XRE-family like proteins 
AL072_RS17930	SM00919	Malic enzyme, NAD binding domain
AL072_RS17930	SM01274	AL072_RS17930
AL072_RS18635	SM00889	Elongation factor G, domain IV
AL072_RS18905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS19880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS19915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS19915	SM00387	Histidine kinase-like ATPases
AL072_RS19915	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS20390	SM00387	Histidine kinase-like ATPases
AL072_RS20390	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS21510	SM00267	diguanylate cyclase
AL072_RS21900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL072_RS23670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL072_RS23685	SM00028	Tetratricopeptide repeats
AL072_RS23760	SM01079	AL072_RS23760
AL072_RS23850	SM00387	Histidine kinase-like ATPases
AL072_RS23870	SM00248	ankyrin repeats
AL072_RS25530	SM00387	Histidine kinase-like ATPases
AL072_RS25530	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS26025	SM00387	Histidine kinase-like ATPases
AL072_RS26025	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS26025	SM00448	cheY-homologous receiver domain
AL072_RS26295	SM01018	B12 binding domain
AL072_RS26420	SM00091	PAS domain
AL072_RS26810	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL072_RS27130	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS27960	SM00388	His Kinase A (phosphoacceptor) domain
AL072_RS28760	SM00091	PAS domain
AL072_RS29150	SM00387	Histidine kinase-like ATPases
AL072_RS30115	SM00962	SRP54-type protein, GTPase domain
AL072_RS30315	SM00493	AL072_RS30315
AL072_RS30935	SM00028	Tetratricopeptide repeats
AL072_RS31275	SM00870	AL072_RS31275
AL072_RS32270	SM00387	Histidine kinase-like ATPases
AL072_RS32270	SM00388	His Kinase A (phosphoacceptor) domain
