Achr_RS00005	SM00382	ATPases associated with a variety of cellular activities
Achr_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
Achr_RS00010	SM00480	DNA polymerase III beta subunit
Achr_RS00020	SM00387	Histidine kinase-like ATPases
Achr_RS00020	SM00433	TopoisomeraseII
Achr_RS00075	SM01001	AIR carboxylase
Achr_RS00080	SM00870	Achr_RS00080
Achr_RS00110	SM00965	Secretin and TonB N terminus short domain
Achr_RS00140	SM00487	DEAD-like helicases superfamily
Achr_RS00140	SM00490	helicase superfamily c-terminal domain
Achr_RS00175	SM00642	Alpha-amylase domain
Achr_RS00185	SM00947	Carbonic anhydrase
Achr_RS00250	SM00829	Enoylreductase
Achr_RS00270	SM00382	ATPases associated with a variety of cellular activities
Achr_RS00285	SM00460	Transglutaminase/protease-like homologues
Achr_RS00290	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Achr_RS00315	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS00340	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Achr_RS00340	SM00474	3'-5' exonuclease
Achr_RS00340	SM00475	5'-3' exonuclease
Achr_RS00340	SM00482	DNA polymerase A domain
Achr_RS00355	SM00052	Putative diguanylate phosphodiesterase
Achr_RS00355	SM00267	diguanylate cyclase
Achr_RS00365	SM00487	DEAD-like helicases superfamily
Achr_RS00365	SM00490	helicase superfamily c-terminal domain
Achr_RS00380	SM01101	Achr_RS00380
Achr_RS00420	SM00978	Achr_RS00420
Achr_RS00425	SM00267	diguanylate cyclase
Achr_RS00430	SM00860	SMI1 / KNR4 family
Achr_RS00445	SM00267	diguanylate cyclase
Achr_RS00510	SM00829	Enoylreductase
Achr_RS00575	SM00563	Phosphate acyltransferases
Achr_RS00600	SM00563	Phosphate acyltransferases
Achr_RS00605	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS00715	SM00382	ATPases associated with a variety of cellular activities
Achr_RS00770	SM00382	ATPases associated with a variety of cellular activities
Achr_RS00770	SM00994	ClpX C4-type zinc finger
Achr_RS00770	SM01086	C-terminal, D2-small domain, of ClpB protein
Achr_RS00860	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Achr_RS00860	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Achr_RS00895	SM01126	Achr_RS00895
Achr_RS00925	SM00849	Metallo-beta-lactamase superfamily
Achr_RS00950	SM00052	Putative diguanylate phosphodiesterase
Achr_RS00955	SM00644	Achr_RS00955
Achr_RS01000	SM00878	Biotin carboxylase C-terminal domain
Achr_RS01020	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01040	SM00966	SpoVT / AbrB like domain 
Achr_RS01065	SM00271	DnaJ molecular chaperone homology domain
Achr_RS01085	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
Achr_RS01150	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01175	SM00642	Alpha-amylase domain
Achr_RS01205	SM01321	Achr_RS01205
Achr_RS01240	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01305	SM00857	Resolvase, N terminal domain
Achr_RS01475	SM00878	Biotin carboxylase C-terminal domain
Achr_RS01515	SM00448	cheY-homologous receiver domain
Achr_RS01515	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS01520	SM00387	Histidine kinase-like ATPases
Achr_RS01520	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS01555	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01590	SM00465	GIY-YIG type nucleases (URI domain)
Achr_RS01640	SM00052	Putative diguanylate phosphodiesterase
Achr_RS01640	SM00091	PAS domain
Achr_RS01640	SM00267	diguanylate cyclase
Achr_RS01645	SM00052	Putative diguanylate phosphodiesterase
Achr_RS01645	SM00091	PAS domain
Achr_RS01645	SM00267	diguanylate cyclase
Achr_RS01655	SM00091	PAS domain
Achr_RS01655	SM00267	diguanylate cyclase
Achr_RS01665	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Achr_RS01680	SM01230	Achr_RS01680
Achr_RS01690	SM01230	Achr_RS01690
Achr_RS01710	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS01725	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01755	SM00248	ankyrin repeats
Achr_RS01755	SM00450	Rhodanese Homology Domain
Achr_RS01800	SM00382	ATPases associated with a variety of cellular activities
Achr_RS01815	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS01815	SM01091	Transporter associated domain
Achr_RS01820	SM00091	PAS domain
Achr_RS01820	SM00387	Histidine kinase-like ATPases
Achr_RS01820	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS01825	SM00448	cheY-homologous receiver domain
Achr_RS01825	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS01845	SM00411	bacterial (prokaryotic) histone like domain
Achr_RS01855	SM00487	DEAD-like helicases superfamily
Achr_RS01855	SM00490	helicase superfamily c-terminal domain
Achr_RS01890	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Achr_RS01955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Achr_RS01960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Achr_RS01960	SM00091	PAS domain
Achr_RS01960	SM00267	diguanylate cyclase
Achr_RS02030	SM00387	Histidine kinase-like ATPases
Achr_RS02030	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS02065	SM00953	Achr_RS02065
Achr_RS02085	SM00382	ATPases associated with a variety of cellular activities
Achr_RS02090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Achr_RS02100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS02115	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Achr_RS02115	SM01232	Achr_RS02115
Achr_RS02170	SM00460	Transglutaminase/protease-like homologues
Achr_RS02180	SM00460	Transglutaminase/protease-like homologues
Achr_RS02195	SM00100	Cyclic nucleotide-monophosphate binding domain
Achr_RS02275	SM00965	Secretin and TonB N terminus short domain
Achr_RS02300	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Achr_RS02300	SM00382	ATPases associated with a variety of cellular activities
Achr_RS02340	SM00419	helix_turn_helix, cAMP Regulatory protein
Achr_RS02350	SM00400	zinc finger
Achr_RS02350	SM00493	Achr_RS02350
Achr_RS02350	SM00766	DNA primase DnaG DnaB-binding
Achr_RS02365	SM01207	Achr_RS02365
Achr_RS02370	SM00905	Dihydroneopterin aldolase
Achr_RS02380	SM00450	Rhodanese Homology Domain
Achr_RS02395	SM00849	Metallo-beta-lactamase superfamily
Achr_RS02400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Achr_RS02415	SM00763	PrkA AAA domain
Achr_RS02420	SM00450	Rhodanese Homology Domain
Achr_RS02435	SM00650	Ribosomal RNA adenine dimethylases
Achr_RS02465	SM00271	DnaJ molecular chaperone homology domain
Achr_RS02515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS02515	SM00387	Histidine kinase-like ATPases
Achr_RS02515	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS02520	SM00448	cheY-homologous receiver domain
Achr_RS02520	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS02540	SM00028	Tetratricopeptide repeats
Achr_RS02580	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Achr_RS02630	SM00854	Bacterial capsule synthesis protein PGA_cap
Achr_RS02645	SM01400	Achr_RS02645
Achr_RS02685	SM00861	Transketolase, pyrimidine binding domain
Achr_RS02735	SM00100	Cyclic nucleotide-monophosphate binding domain
Achr_RS02735	SM00419	helix_turn_helix, cAMP Regulatory protein
Achr_RS02765	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Achr_RS02850	SM00244	prohibitin homologues
Achr_RS02855	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Achr_RS02855	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Achr_RS02875	SM00267	diguanylate cyclase
Achr_RS02905	SM00563	Phosphate acyltransferases
Achr_RS02920	SM00479	Achr_RS02920
Achr_RS02925	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS02955	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS02955	SM00876	Biotin and Thiamin Synthesis associated domain
Achr_RS02980	SM00563	Phosphate acyltransferases
Achr_RS03000	SM00090	RIO-like kinase
Achr_RS03030	SM00100	Cyclic nucleotide-monophosphate binding domain
Achr_RS03030	SM00419	helix_turn_helix, cAMP Regulatory protein
Achr_RS03040	SM00749	bacterial OsmY and nodulation domain
Achr_RS03060	SM00382	ATPases associated with a variety of cellular activities
Achr_RS03060	SM00448	cheY-homologous receiver domain
Achr_RS03065	SM00091	PAS domain
Achr_RS03065	SM00387	Histidine kinase-like ATPases
Achr_RS03065	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS03080	SM01230	Achr_RS03080
Achr_RS03085	SM00981	Achr_RS03085
Achr_RS03285	SM00382	ATPases associated with a variety of cellular activities
Achr_RS03285	SM01086	C-terminal, D2-small domain, of ClpB protein
Achr_RS03300	SM00836	DALR anticodon binding domain
Achr_RS03300	SM01016	Arginyl tRNA synthetase N terminal dom
Achr_RS03305	SM00487	DEAD-like helicases superfamily
Achr_RS03305	SM00490	helicase superfamily c-terminal domain
Achr_RS03315	SM00318	Staphylococcal nuclease homologues
Achr_RS03325	SM00919	Malic enzyme, NAD binding domain
Achr_RS03325	SM01274	Achr_RS03325
Achr_RS03335	SM00842	Cell division protein FtsA
Achr_RS03355	SM00965	Secretin and TonB N terminus short domain
Achr_RS03435	SM01091	Transporter associated domain
Achr_RS03555	SM00382	ATPases associated with a variety of cellular activities
Achr_RS03625	SM00267	diguanylate cyclase
Achr_RS03625	SM01079	Achr_RS03625
Achr_RS03725	SM00382	ATPases associated with a variety of cellular activities
Achr_RS03755	SM00749	bacterial OsmY and nodulation domain
Achr_RS03770	SM00387	Histidine kinase-like ATPases
Achr_RS03770	SM00433	TopoisomeraseII
Achr_RS03780	SM00434	DNA Topoisomerase IV
Achr_RS03795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Achr_RS03795	SM00387	Histidine kinase-like ATPases
Achr_RS03795	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS03825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Achr_RS03825	SM00895	Achr_RS03825
Achr_RS03870	SM00271	DnaJ molecular chaperone homology domain
Achr_RS03880	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Achr_RS03885	SM00851	MGS-like domain
Achr_RS03885	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Achr_RS03895	SM01103	Achr_RS03895
Achr_RS03905	SM00382	ATPases associated with a variety of cellular activities
Achr_RS03940	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS03960	SM01387	Achr_RS03960
Achr_RS03965	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS03965	SM00322	K homology RNA-binding domain
Achr_RS04015	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04015	SM00448	cheY-homologous receiver domain
Achr_RS04020	SM00091	PAS domain
Achr_RS04020	SM00387	Histidine kinase-like ATPases
Achr_RS04020	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS04060	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04160	SM00917	LeuA allosteric (dimerisation) domain
Achr_RS04395	SM00829	Enoylreductase
Achr_RS04405	SM00861	Transketolase, pyrimidine binding domain
Achr_RS04420	SM00822	Achr_RS04420
Achr_RS04425	SM00091	PAS domain
Achr_RS04425	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04445	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS04505	SM01400	Achr_RS04505
Achr_RS04530	SM00028	Tetratricopeptide repeats
Achr_RS04540	SM00937	Achr_RS04540
Achr_RS04565	SM00422	helix_turn_helix, mercury resistance
Achr_RS04680	SM00849	Metallo-beta-lactamase superfamily
Achr_RS04715	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Achr_RS04730	SM00387	Histidine kinase-like ATPases
Achr_RS04730	SM01049	Achr_RS04730
Achr_RS04735	SM00421	helix_turn_helix, Lux Regulon
Achr_RS04735	SM00448	cheY-homologous receiver domain
Achr_RS04745	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04765	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04850	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Achr_RS04870	SM00904	Riboflavin kinase
Achr_RS04935	SM00382	ATPases associated with a variety of cellular activities
Achr_RS04935	SM00448	cheY-homologous receiver domain
Achr_RS04940	SM00387	Histidine kinase-like ATPases
Achr_RS04940	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS05025	SM01323	Achr_RS05025
Achr_RS05045	SM01126	Achr_RS05045
Achr_RS05085	SM00271	DnaJ molecular chaperone homology domain
Achr_RS05105	SM00562	Achr_RS05105
Achr_RS05115	SM00028	Tetratricopeptide repeats
Achr_RS05140	SM00564	beta-propeller repeat
Achr_RS05175	SM00903	Flavin reductase like domain
Achr_RS05190	SM00917	LeuA allosteric (dimerisation) domain
Achr_RS05210	SM00564	beta-propeller repeat
Achr_RS05235	SM00421	helix_turn_helix, Lux Regulon
Achr_RS05305	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS05305	SM01240	Achr_RS05305
Achr_RS05330	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS05335	SM01211	Achr_RS05335
Achr_RS05365	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS05365	SM01091	Transporter associated domain
Achr_RS05375	SM00382	ATPases associated with a variety of cellular activities
Achr_RS05375	SM00962	SRP54-type protein, GTPase domain
Achr_RS05375	SM00963	SRP54-type protein, helical bundle domain
Achr_RS05465	SM00267	diguanylate cyclase
Achr_RS05470	SM01322	Achr_RS05470
Achr_RS05495	SM00937	Achr_RS05495
Achr_RS05515	SM01154	Achr_RS05515
Achr_RS05535	SM00506	Appr-1"-p processing enzyme
Achr_RS05575	SM00382	ATPases associated with a variety of cellular activities
Achr_RS05590	SM00357	Cold shock protein domain
Achr_RS05620	SM00448	cheY-homologous receiver domain
Achr_RS05620	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS05625	SM00387	Histidine kinase-like ATPases
Achr_RS05625	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS05705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Achr_RS05750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Achr_RS05760	SM00935	Outer membrane protein (OmpH-like)
Achr_RS05790	SM00481	DNA polymerase alpha chain like domain
Achr_RS05800	SM00977	TilS substrate C-terminal domain
Achr_RS05815	SM01192	Achr_RS05815
Achr_RS05815	SM01193	Achr_RS05815
Achr_RS05830	SM00829	Enoylreductase
Achr_RS05865	SM00257	Lysin motif
Achr_RS05880	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Achr_RS05880	SM00534	ATPase domain of DNA mismatch repair MUTS family
Achr_RS05890	SM00382	ATPases associated with a variety of cellular activities
Achr_RS05905	SM00849	Metallo-beta-lactamase superfamily
Achr_RS05905	SM01027	Beta-Casp domain
Achr_RS05920	SM01144	Achr_RS05920
Achr_RS05925	SM00421	helix_turn_helix, Lux Regulon
Achr_RS05925	SM00448	cheY-homologous receiver domain
Achr_RS05950	SM00267	diguanylate cyclase
Achr_RS05975	SM00382	ATPases associated with a variety of cellular activities
Achr_RS06000	SM00479	Achr_RS06000
Achr_RS06035	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS06040	SM00882	Coenzyme A transferase
Achr_RS06045	SM00882	Coenzyme A transferase
Achr_RS06055	SM00998	Adenylosuccinate lyase C-terminus
Achr_RS06190	SM00052	Putative diguanylate phosphodiesterase
Achr_RS06190	SM00267	diguanylate cyclase
Achr_RS06210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Achr_RS06220	SM00563	Phosphate acyltransferases
Achr_RS06230	SM00849	Metallo-beta-lactamase superfamily
Achr_RS06270	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS06305	SM00073	Histidine Phosphotransfer domain
Achr_RS06305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS06305	SM00387	Histidine kinase-like ATPases
Achr_RS06305	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS06305	SM00448	cheY-homologous receiver domain
Achr_RS06320	SM00954	Region found in RelA / SpoT proteins
Achr_RS06325	SM00448	cheY-homologous receiver domain
Achr_RS06325	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS06465	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Achr_RS06470	SM00382	ATPases associated with a variety of cellular activities
Achr_RS06505	SM00028	Tetratricopeptide repeats
Achr_RS06555	SM01130	Achr_RS06555
Achr_RS06610	SM00387	Histidine kinase-like ATPases
Achr_RS06610	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS06610	SM00448	cheY-homologous receiver domain
Achr_RS06640	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS06650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Achr_RS06650	SM00245	tail specific protease
Achr_RS06655	SM00829	Enoylreductase
Achr_RS06735	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS06735	SM01091	Transporter associated domain
Achr_RS06750	SM00387	Histidine kinase-like ATPases
Achr_RS06750	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS06750	SM00448	cheY-homologous receiver domain
Achr_RS06770	SM00347	helix_turn_helix multiple antibiotic resistance protein
Achr_RS06820	SM00382	ATPases associated with a variety of cellular activities
Achr_RS06840	SM00749	bacterial OsmY and nodulation domain
Achr_RS06940	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS06965	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Achr_RS06995	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS06995	SM00924	MgtE intracellular N domain
Achr_RS07010	SM01230	Achr_RS07010
Achr_RS07020	SM00382	ATPases associated with a variety of cellular activities
Achr_RS07030	SM00331	Sigma factor PP2C-like phosphatases
Achr_RS07030	SM00448	cheY-homologous receiver domain
Achr_RS07035	SM00073	Histidine Phosphotransfer domain
Achr_RS07080	SM01329	Achr_RS07080
Achr_RS07085	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Achr_RS07090	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Achr_RS07210	SM01236	Achr_RS07210
Achr_RS07215	SM00822	Achr_RS07215
Achr_RS07225	SM00448	cheY-homologous receiver domain
Achr_RS07225	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS07230	SM00387	Histidine kinase-like ATPases
Achr_RS07230	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS07245	SM00357	Cold shock protein domain
Achr_RS07280	SM00028	Tetratricopeptide repeats
Achr_RS07285	SM00327	von Willebrand factor (vWF) type A domain
Achr_RS07355	SM00981	Achr_RS07355
Achr_RS07370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Achr_RS07395	SM00318	Staphylococcal nuclease homologues
Achr_RS07410	SM00490	helicase superfamily c-terminal domain
Achr_RS07435	SM01101	Achr_RS07435
Achr_RS07440	SM00487	DEAD-like helicases superfamily
Achr_RS07440	SM00490	helicase superfamily c-terminal domain
Achr_RS07465	SM01101	Achr_RS07465
Achr_RS07515	SM00487	DEAD-like helicases superfamily
Achr_RS07515	SM00490	helicase superfamily c-terminal domain
Achr_RS07530	SM00382	ATPases associated with a variety of cellular activities
Achr_RS07560	SM00387	Histidine kinase-like ATPases
Achr_RS07600	SM00478	endonuclease III
Achr_RS07600	SM00525	Achr_RS07600
Achr_RS07610	SM00900	Achr_RS07610
Achr_RS07670	SM01240	Achr_RS07670
Achr_RS07735	SM00769	Water Stress and Hypersensitive response
Achr_RS07765	SM00491	Achr_RS07765
Achr_RS07875	SM00382	ATPases associated with a variety of cellular activities
Achr_RS07890	SM00736	Dystroglycan-type cadherin-like domains.
Achr_RS07920	SM00028	Tetratricopeptide repeats
Achr_RS07980	SM01321	Achr_RS07980
Achr_RS07990	SM01321	Achr_RS07990
Achr_RS08010	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Achr_RS08030	SM00731	SprT homologues.
Achr_RS08140	SM00855	Phosphoglycerate mutase family
Achr_RS08165	SM00450	Rhodanese Homology Domain
Achr_RS08185	SM00640	Glycosyl hydrolases family 32
Achr_RS08190	SM00341	Helicase and RNase D C-terminal
Achr_RS08190	SM00474	3'-5' exonuclease
Achr_RS08200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Achr_RS08200	SM00895	Achr_RS08200
Achr_RS08215	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Achr_RS08260	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08270	SM01144	Achr_RS08270
Achr_RS08285	SM00341	Helicase and RNase D C-terminal
Achr_RS08285	SM00487	DEAD-like helicases superfamily
Achr_RS08285	SM00490	helicase superfamily c-terminal domain
Achr_RS08285	SM00956	Achr_RS08285
Achr_RS08290	SM00347	helix_turn_helix multiple antibiotic resistance protein
Achr_RS08310	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Achr_RS08325	SM00331	Sigma factor PP2C-like phosphatases
Achr_RS08325	SM00448	cheY-homologous receiver domain
Achr_RS08390	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS08460	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08490	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08495	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS08525	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08525	SM00930	Achr_RS08525
Achr_RS08580	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Achr_RS08590	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS08595	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS08600	SM01007	Class II Aldolase and Adducin N-terminal domain
Achr_RS08630	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08650	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS08680	SM00450	Rhodanese Homology Domain
Achr_RS08700	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08710	SM00822	Achr_RS08710
Achr_RS08770	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08775	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08810	SM00382	ATPases associated with a variety of cellular activities
Achr_RS08830	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS08995	SM00984	UDP binding domain
Achr_RS09010	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09020	SM00984	UDP binding domain
Achr_RS09030	SM00226	Low molecular weight phosphatase family
Achr_RS09055	SM00479	Achr_RS09055
Achr_RS09090	SM00861	Transketolase, pyrimidine binding domain
Achr_RS09110	SM00881	CoA binding domain
Achr_RS09135	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09160	SM00257	Lysin motif
Achr_RS09165	SM00849	Metallo-beta-lactamase superfamily
Achr_RS09180	SM00479	Achr_RS09180
Achr_RS09190	SM00822	Achr_RS09190
Achr_RS09190	SM00825	Beta-ketoacyl synthase
Achr_RS09190	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Achr_RS09210	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09235	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Achr_RS09270	SM00487	DEAD-like helicases superfamily
Achr_RS09270	SM00490	helicase superfamily c-terminal domain
Achr_RS09325	SM01018	B12 binding domain
Achr_RS09370	SM00448	cheY-homologous receiver domain
Achr_RS09400	SM00965	Secretin and TonB N terminus short domain
Achr_RS09420	SM00825	Beta-ketoacyl synthase
Achr_RS09435	SM00855	Phosphoglycerate mutase family
Achr_RS09440	SM00387	Histidine kinase-like ATPases
Achr_RS09440	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS09445	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09445	SM00448	cheY-homologous receiver domain
Achr_RS09470	SM00640	Glycosyl hydrolases family 32
Achr_RS09485	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09580	SM00357	Cold shock protein domain
Achr_RS09590	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09645	SM00448	cheY-homologous receiver domain
Achr_RS09645	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS09650	SM00387	Histidine kinase-like ATPases
Achr_RS09690	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Achr_RS09690	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Achr_RS09695	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Achr_RS09740	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
Achr_RS09770	SM00357	Cold shock protein domain
Achr_RS09780	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09780	SM01086	C-terminal, D2-small domain, of ClpB protein
Achr_RS09785	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS09805	SM00843	Achr_RS09805
Achr_RS09815	SM00382	ATPases associated with a variety of cellular activities
Achr_RS09865	SM00642	Alpha-amylase domain
Achr_RS09870	SM00642	Alpha-amylase domain
Achr_RS09875	SM00642	Alpha-amylase domain
Achr_RS09895	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS09900	SM00829	Enoylreductase
Achr_RS09920	SM00422	helix_turn_helix, mercury resistance
Achr_RS09940	SM00387	Histidine kinase-like ATPases
Achr_RS09940	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS09945	SM00448	cheY-homologous receiver domain
Achr_RS09945	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS09970	SM00829	Enoylreductase
Achr_RS09985	SM00155	Phospholipase D. Active site motifs.
Achr_RS09995	SM00829	Enoylreductase
Achr_RS10000	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS10005	SM00642	Alpha-amylase domain
Achr_RS10015	SM00642	Alpha-amylase domain
Achr_RS10025	SM00642	Alpha-amylase domain
Achr_RS10080	SM00421	helix_turn_helix, Lux Regulon
Achr_RS10080	SM00448	cheY-homologous receiver domain
Achr_RS10085	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Achr_RS10085	SM00465	GIY-YIG type nucleases (URI domain)
Achr_RS10185	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS10205	SM01040	BRO family, N-terminal domain
Achr_RS10230	SM00990	Achr_RS10230
Achr_RS10245	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS10430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Achr_RS10430	SM00091	PAS domain
Achr_RS10430	SM00387	Histidine kinase-like ATPases
Achr_RS10430	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS10530	SM00421	helix_turn_helix, Lux Regulon
Achr_RS10530	SM00448	cheY-homologous receiver domain
Achr_RS10585	SM00893	Electron transfer flavoprotein domain
Achr_RS10590	SM00893	Electron transfer flavoprotein domain
Achr_RS10670	SM00072	Guanylate kinase homologues.
Achr_RS10675	SM00318	Staphylococcal nuclease homologues
Achr_RS10690	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Achr_RS10740	SM00746	metallochaperone-like domain
Achr_RS10750	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Achr_RS10760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Achr_RS10770	SM00382	ATPases associated with a variety of cellular activities
Achr_RS10790	SM00382	ATPases associated with a variety of cellular activities
Achr_RS10815	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Achr_RS10820	SM00382	ATPases associated with a variety of cellular activities
Achr_RS10825	SM00382	ATPases associated with a variety of cellular activities
Achr_RS10875	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
Achr_RS10890	SM00267	diguanylate cyclase
Achr_RS10905	SM00953	Achr_RS10905
Achr_RS11020	SM00354	helix_turn _helix lactose operon repressor
Achr_RS11055	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS11235	SM00769	Water Stress and Hypersensitive response
Achr_RS11245	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Achr_RS11245	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Achr_RS11245	SM00493	Achr_RS11245
Achr_RS11260	SM01192	Achr_RS11260
Achr_RS11260	SM01193	Achr_RS11260
Achr_RS11290	SM00354	helix_turn _helix lactose operon repressor
Achr_RS11370	SM00855	Phosphoglycerate mutase family
Achr_RS11415	SM00858	Achr_RS11415
Achr_RS11485	SM01007	Class II Aldolase and Adducin N-terminal domain
Achr_RS11515	SM00463	Small MutS-related domain
Achr_RS11540	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS11565	SM00411	bacterial (prokaryotic) histone like domain
Achr_RS11570	SM00382	ATPases associated with a variety of cellular activities
Achr_RS11570	SM00464	Found in ATP-dependent protease La (LON)
Achr_RS11575	SM00382	ATPases associated with a variety of cellular activities
Achr_RS11575	SM00994	ClpX C4-type zinc finger
Achr_RS11575	SM01086	C-terminal, D2-small domain, of ClpB protein
Achr_RS11610	SM00840	Achr_RS11610
Achr_RS11630	SM00382	ATPases associated with a variety of cellular activities
Achr_RS11665	SM00448	cheY-homologous receiver domain
Achr_RS11665	SM01012	Achr_RS11665
Achr_RS11680	SM00364	Leucine-rich repeats, bacterial type
Achr_RS11680	SM00369	Leucine-rich repeats, typical (most populated) subfamily
Achr_RS11700	SM00220	Serine/Threonine protein kinases, catalytic domain
Achr_RS11700	SM00331	Sigma factor PP2C-like phosphatases
Achr_RS11700	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Achr_RS11715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Achr_RS11785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Achr_RS11785	SM00895	Achr_RS11785
Achr_RS11855	SM00382	ATPases associated with a variety of cellular activities
Achr_RS11875	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS11885	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Achr_RS11905	SM00460	Transglutaminase/protease-like homologues
Achr_RS11925	SM00831	Cation transporter/ATPase, N-terminus
Achr_RS11940	SM00382	ATPases associated with a variety of cellular activities
Achr_RS11970	SM00823	Phosphopantetheine attachment site
Achr_RS11970	SM00824	Thioesterase
Achr_RS12005	SM00267	diguanylate cyclase
Achr_RS12020	SM01060	Achr_RS12020
Achr_RS12045	SM00899	Achr_RS12045
Achr_RS12090	SM00965	Secretin and TonB N terminus short domain
Achr_RS12150	SM01092	CO dehydrogenase flavoprotein C-terminal domain
Achr_RS12155	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Achr_RS12180	SM00091	PAS domain
Achr_RS12180	SM00421	helix_turn_helix, Lux Regulon
Achr_RS12210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Achr_RS12210	SM00895	Achr_RS12210
Achr_RS12215	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS12235	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12300	SM00450	Rhodanese Homology Domain
Achr_RS12305	SM00240	Forkhead associated domain
Achr_RS12310	SM00220	Serine/Threonine protein kinases, catalytic domain
Achr_RS12315	SM00331	Sigma factor PP2C-like phosphatases
Achr_RS12315	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Achr_RS12320	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12355	SM00028	Tetratricopeptide repeats
Achr_RS12385	SM01126	Achr_RS12385
Achr_RS12405	SM00422	helix_turn_helix, mercury resistance
Achr_RS12410	SM00411	bacterial (prokaryotic) histone like domain
Achr_RS12415	SM00873	B3/4 domain
Achr_RS12415	SM00874	tRNA synthetase B5 domain
Achr_RS12415	SM00896	Ferredoxin-fold anticodon binding domain
Achr_RS12440	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Achr_RS12500	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS12530	SM00487	DEAD-like helicases superfamily
Achr_RS12530	SM00490	helicase superfamily c-terminal domain
Achr_RS12630	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS12635	SM00100	Cyclic nucleotide-monophosphate binding domain
Achr_RS12635	SM00419	helix_turn_helix, cAMP Regulatory protein
Achr_RS12665	SM00493	Achr_RS12665
Achr_RS12675	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12710	SM01126	Achr_RS12710
Achr_RS12725	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS12765	SM00487	DEAD-like helicases superfamily
Achr_RS12765	SM00490	helicase superfamily c-terminal domain
Achr_RS12770	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Achr_RS12770	SM00292	breast cancer carboxy-terminal domain
Achr_RS12770	SM00532	Ligase N family
Achr_RS12775	SM00771	ZipA, C-terminal domain (FtsZ-binding)
Achr_RS12780	SM00968	SMC proteins Flexible Hinge Domain
Achr_RS12785	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS12800	SM00028	Tetratricopeptide repeats
Achr_RS12840	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12875	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12890	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS12910	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12945	SM00382	ATPases associated with a variety of cellular activities
Achr_RS12945	SM00448	cheY-homologous receiver domain
Achr_RS12950	SM00387	Histidine kinase-like ATPases
Achr_RS12950	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS12955	SM00487	DEAD-like helicases superfamily
Achr_RS12955	SM00490	helicase superfamily c-terminal domain
Achr_RS12960	SM00507	HNH nucleases
Achr_RS12980	SM00357	Cold shock protein domain
Achr_RS13030	SM00448	cheY-homologous receiver domain
Achr_RS13030	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS13035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS13035	SM00387	Histidine kinase-like ATPases
Achr_RS13035	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS13105	SM00091	PAS domain
Achr_RS13105	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13115	SM00822	Achr_RS13115
Achr_RS13125	SM00882	Coenzyme A transferase
Achr_RS13130	SM00882	Coenzyme A transferase
Achr_RS13135	SM00849	Metallo-beta-lactamase superfamily
Achr_RS13165	SM00487	DEAD-like helicases superfamily
Achr_RS13170	SM01321	Achr_RS13170
Achr_RS13215	SM00363	S4 RNA-binding domain
Achr_RS13220	SM00822	Achr_RS13220
Achr_RS13240	SM00829	Enoylreductase
Achr_RS13255	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13280	SM00640	Glycosyl hydrolases family 32
Achr_RS13300	SM00893	Electron transfer flavoprotein domain
Achr_RS13305	SM00893	Electron transfer flavoprotein domain
Achr_RS13325	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS13360	SM00347	helix_turn_helix multiple antibiotic resistance protein
Achr_RS13365	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13365	SM00487	DEAD-like helicases superfamily
Achr_RS13365	SM00490	helicase superfamily c-terminal domain
Achr_RS13365	SM00847	Helicase associated domain (HA2)  Add an annotation
Achr_RS13450	SM00984	UDP binding domain
Achr_RS13530	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13550	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13565	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Achr_RS13570	SM00849	Metallo-beta-lactamase superfamily
Achr_RS13570	SM01027	Beta-Casp domain
Achr_RS13580	SM00411	bacterial (prokaryotic) histone like domain
Achr_RS13585	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS13605	SM00830	Chorismate mutase type II
Achr_RS13615	SM00434	DNA Topoisomerase IV
Achr_RS13645	SM00363	S4 RNA-binding domain
Achr_RS13690	SM00481	DNA polymerase alpha chain like domain
Achr_RS13705	SM00448	cheY-homologous receiver domain
Achr_RS13705	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS13715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS13715	SM00387	Histidine kinase-like ATPases
Achr_RS13715	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS13740	SM00448	cheY-homologous receiver domain
Achr_RS13740	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS13745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS13745	SM00387	Histidine kinase-like ATPases
Achr_RS13745	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS13755	SM00382	ATPases associated with a variety of cellular activities
Achr_RS13790	SM00387	Histidine kinase-like ATPases
Achr_RS13790	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS13790	SM00448	cheY-homologous receiver domain
Achr_RS13830	SM00487	DEAD-like helicases superfamily
Achr_RS13830	SM00490	helicase superfamily c-terminal domain
Achr_RS13890	SM00347	helix_turn_helix multiple antibiotic resistance protein
Achr_RS13900	SM00841	Elongation factor P, C-terminal
Achr_RS13900	SM01185	Achr_RS13900
Achr_RS13925	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Achr_RS13935	SM00448	cheY-homologous receiver domain
Achr_RS13940	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS13940	SM00387	Histidine kinase-like ATPases
Achr_RS13955	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS13960	SM00893	Electron transfer flavoprotein domain
Achr_RS13965	SM00893	Electron transfer flavoprotein domain
Achr_RS13990	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Achr_RS14000	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS14010	SM00903	Flavin reductase like domain
Achr_RS14065	SM00825	Beta-ketoacyl synthase
Achr_RS14075	SM00822	Achr_RS14075
Achr_RS14080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Achr_RS14115	SM00363	S4 RNA-binding domain
Achr_RS14120	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS14130	SM00226	Low molecular weight phosphatase family
Achr_RS14160	SM00849	Metallo-beta-lactamase superfamily
Achr_RS14175	SM00382	ATPases associated with a variety of cellular activities
Achr_RS14220	SM00900	Achr_RS14220
Achr_RS14235	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Achr_RS14240	SM00487	DEAD-like helicases superfamily
Achr_RS14240	SM00490	helicase superfamily c-terminal domain
Achr_RS14240	SM00982	Achr_RS14240
Achr_RS14240	SM01058	CarD-like/TRCF domain
Achr_RS14290	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Achr_RS14290	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Achr_RS14290	SM00493	Achr_RS14290
Achr_RS14310	SM00347	helix_turn_helix multiple antibiotic resistance protein
Achr_RS14315	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS14330	SM00893	Electron transfer flavoprotein domain
Achr_RS14335	SM00893	Electron transfer flavoprotein domain
Achr_RS14390	SM00382	ATPases associated with a variety of cellular activities
Achr_RS14400	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Achr_RS14405	SM00852	Probable molybdopterin binding domain
Achr_RS14410	SM00852	Probable molybdopterin binding domain
Achr_RS14475	SM00479	Achr_RS14475
Achr_RS14495	SM00382	ATPases associated with a variety of cellular activities
Achr_RS14540	SM00382	ATPases associated with a variety of cellular activities
Achr_RS14540	SM00464	Found in ATP-dependent protease La (LON)
Achr_RS14580	SM00358	Double-stranded RNA binding motif
Achr_RS14580	SM00535	Ribonuclease III family
Achr_RS14660	SM00986	Uracil DNA glycosylase superfamily
Achr_RS14660	SM00987	UreE urease accessory protein, C-terminal domain 
Achr_RS14680	SM00363	S4 RNA-binding domain
Achr_RS14690	SM00507	HNH nucleases
Achr_RS14700	SM00883	Chaperonin 10 Kd subunit
Achr_RS14715	SM00822	Achr_RS14715
Achr_RS14740	SM00091	PAS domain
Achr_RS14740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS14740	SM00387	Histidine kinase-like ATPases
Achr_RS14740	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS14765	SM00957	SecA DEAD-like domain
Achr_RS14765	SM00958	SecA preprotein cross-linking domain
Achr_RS14780	SM00864	Tubulin/FtsZ family, GTPase domain
Achr_RS14780	SM00865	Tubulin/FtsZ family, C-terminal domain
Achr_RS14785	SM00842	Cell division protein FtsA
Achr_RS14880	SM00749	bacterial OsmY and nodulation domain
Achr_RS14915	SM01126	Achr_RS14915
Achr_RS14970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Achr_RS15020	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15025	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS15045	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15100	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS15135	SM00845	GatB domain
Achr_RS15155	SM00448	cheY-homologous receiver domain
Achr_RS15160	SM00387	Histidine kinase-like ATPases
Achr_RS15160	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS15185	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15190	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15195	SM00797	Allophanate hydrolase subunit 2
Achr_RS15200	SM00796	Allophanate hydrolase subunit 1
Achr_RS15220	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
Achr_RS15225	SM00671	Sel1-like repeats.
Achr_RS15245	SM01321	Achr_RS15245
Achr_RS15265	SM00354	helix_turn _helix lactose operon repressor
Achr_RS15275	SM00984	UDP binding domain
Achr_RS15290	SM00644	Achr_RS15290
Achr_RS15315	SM00966	SpoVT / AbrB like domain 
Achr_RS15330	SM01321	Achr_RS15330
Achr_RS15410	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15410	SM01086	C-terminal, D2-small domain, of ClpB protein
Achr_RS15440	SM00357	Cold shock protein domain
Achr_RS15480	SM00052	Putative diguanylate phosphodiesterase
Achr_RS15480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Achr_RS15480	SM00267	diguanylate cyclase
Achr_RS15490	SM01091	Transporter associated domain
Achr_RS15570	SM00487	DEAD-like helicases superfamily
Achr_RS15570	SM00490	helicase superfamily c-terminal domain
Achr_RS15590	SM00670	Large family of predicted nucleotide-binding domains
Achr_RS15640	SM00382	ATPases associated with a variety of cellular activities
Achr_RS15640	SM00448	cheY-homologous receiver domain
Achr_RS15655	SM00822	Achr_RS15655
Achr_RS15695	SM00984	UDP binding domain
Achr_RS15710	SM00671	Sel1-like repeats.
Achr_RS15720	SM00710	Parallel beta-helix repeats
Achr_RS15720	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
Achr_RS15760	SM00487	DEAD-like helicases superfamily
Achr_RS15760	SM00490	helicase superfamily c-terminal domain
Achr_RS15795	SM00861	Transketolase, pyrimidine binding domain
Achr_RS15805	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Achr_RS15815	SM01057	Eukaryotic-type carbonic anhydrase
Achr_RS15830	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS15890	SM00387	Histidine kinase-like ATPases
Achr_RS15890	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS15895	SM00448	cheY-homologous receiver domain
Achr_RS15895	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS15925	SM00893	Electron transfer flavoprotein domain
Achr_RS15985	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Achr_RS16025	SM00905	Dihydroneopterin aldolase
Achr_RS16040	SM01235	Achr_RS16040
Achr_RS16110	SM00857	Resolvase, N terminal domain
Achr_RS16160	SM00422	helix_turn_helix, mercury resistance
Achr_RS16180	SM00487	DEAD-like helicases superfamily
Achr_RS16180	SM00490	helicase superfamily c-terminal domain
Achr_RS16190	SM00487	DEAD-like helicases superfamily
Achr_RS16190	SM00490	helicase superfamily c-terminal domain
Achr_RS16190	SM00847	Helicase associated domain (HA2)  Add an annotation
Achr_RS16205	SM00344	helix_turn_helix ASNC type
Achr_RS16275	SM00988	UreE urease accessory protein, N-terminal domain
Achr_RS16355	SM00671	Sel1-like repeats.
Achr_RS16380	SM00091	PAS domain
Achr_RS16380	SM00421	helix_turn_helix, Lux Regulon
Achr_RS16385	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS16400	SM00116	Domain in cystathionine beta-synthase and other proteins.
Achr_RS16400	SM01091	Transporter associated domain
Achr_RS16445	SM00318	Staphylococcal nuclease homologues
Achr_RS16475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Achr_RS16530	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS16580	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS16595	SM00936	Penicillin-binding protein 5, C-terminal domain 
Achr_RS16640	SM00014	Acid phosphatase homologues
Achr_RS16645	SM00642	Alpha-amylase domain
Achr_RS16650	SM00464	Found in ATP-dependent protease La (LON)
Achr_RS16680	SM00382	ATPases associated with a variety of cellular activities
Achr_RS16685	SM00267	diguanylate cyclase
Achr_RS16715	SM00382	ATPases associated with a variety of cellular activities
Achr_RS16730	SM00829	Enoylreductase
Achr_RS16750	SM00052	Putative diguanylate phosphodiesterase
Achr_RS16750	SM00091	PAS domain
Achr_RS16750	SM00267	diguanylate cyclase
Achr_RS16750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS16765	SM00861	Transketolase, pyrimidine binding domain
Achr_RS16825	SM01005	Alanine racemase, C-terminal domain
Achr_RS16830	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS16875	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Achr_RS16880	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS16880	SM00357	Cold shock protein domain
Achr_RS16880	SM00955	Achr_RS16880
Achr_RS16895	SM00788	Adenylosuccinate synthetase
Achr_RS16910	SM00244	prohibitin homologues
Achr_RS16915	SM00244	prohibitin homologues
Achr_RS16935	SM00853	MutL C terminal dimerisation domain
Achr_RS16935	SM01340	Achr_RS16935
Achr_RS16940	SM00257	Lysin motif
Achr_RS16940	SM00646	Achr_RS16940
Achr_RS16960	SM00479	Achr_RS16960
Achr_RS16970	SM00450	Rhodanese Homology Domain
Achr_RS16980	SM00052	Putative diguanylate phosphodiesterase
Achr_RS16980	SM00091	PAS domain
Achr_RS16980	SM00267	diguanylate cyclase
Achr_RS16985	SM00829	Enoylreductase
Achr_RS17025	SM00822	Achr_RS17025
Achr_RS17040	SM00062	Bacterial periplasmic substrate-binding proteins
Achr_RS17055	SM00382	ATPases associated with a variety of cellular activities
Achr_RS17060	SM00870	Achr_RS17060
Achr_RS17265	SM00878	Biotin carboxylase C-terminal domain
Achr_RS17265	SM01209	Achr_RS17265
Achr_RS17290	SM00798	AICARFT/IMPCHase bienzyme
Achr_RS17290	SM00851	MGS-like domain
Achr_RS17295	SM01209	Achr_RS17295
Achr_RS17295	SM01210	Achr_RS17295
Achr_RS17300	SM00387	Histidine kinase-like ATPases
Achr_RS17300	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS17300	SM00448	cheY-homologous receiver domain
Achr_RS17415	SM00382	ATPases associated with a variety of cellular activities
Achr_RS17485	SM00822	Achr_RS17485
Achr_RS17515	SM00662	RNA polymerases D
Achr_RS17520	SM00363	S4 RNA-binding domain
Achr_RS17520	SM01390	Achr_RS17520
Achr_RS17585	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Achr_RS17590	SM01374	Achr_RS17590
Achr_RS17610	SM00322	K homology RNA-binding domain
Achr_RS17625	SM01382	Achr_RS17625
Achr_RS17625	SM01383	Achr_RS17625
Achr_RS17645	SM01403	Achr_RS17645
Achr_RS17655	SM00838	Elongation factor G C-terminus
Achr_RS17655	SM00889	Elongation factor G, domain IV
Achr_RS17670	SM00663	RNA polymerase I subunit A N-terminus
Achr_RS17695	SM00649	Ribosomal protein L11/L12
Achr_RS17700	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Achr_RS17700	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Achr_RS17785	SM00420	helix_turn_helix, Deoxyribose operon repressor
Achr_RS17785	SM01134	Achr_RS17785
Achr_RS17820	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Achr_RS17825	SM00861	Transketolase, pyrimidine binding domain
Achr_RS17830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Achr_RS17840	SM00825	Beta-ketoacyl synthase
Achr_RS17865	SM00155	Phospholipase D. Active site motifs.
Achr_RS17895	SM00825	Beta-ketoacyl synthase
Achr_RS17920	SM00984	UDP binding domain
Achr_RS18005	SM00363	S4 RNA-binding domain
Achr_RS18020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS18020	SM00387	Histidine kinase-like ATPases
Achr_RS18020	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS18025	SM00448	cheY-homologous receiver domain
Achr_RS18025	SM00862	Transcriptional regulatory protein, C terminal
Achr_RS18040	SM00028	Tetratricopeptide repeats
Achr_RS18060	SM00316	Ribosomal protein S1-like RNA-binding domain
Achr_RS18060	SM00732	Likely ribonuclease with RNase H fold.
Achr_RS18075	SM00642	Alpha-amylase domain
Achr_RS18110	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18185	SM00267	diguanylate cyclase
Achr_RS18190	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS18215	SM01118	Achr_RS18215
Achr_RS18225	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18250	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18270	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18300	SM00450	Rhodanese Homology Domain
Achr_RS18315	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Achr_RS18315	SM00245	tail specific protease
Achr_RS18355	SM00478	endonuclease III
Achr_RS18375	SM01126	Achr_RS18375
Achr_RS18435	SM01011	Aminopeptidase P, N-terminal domain
Achr_RS18475	SM00357	Cold shock protein domain
Achr_RS18475	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18475	SM00959	Rho termination factor, N-terminal domain
Achr_RS18495	SM01004	Delta-aminolevulinic acid dehydratase
Achr_RS18525	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18570	SM00448	cheY-homologous receiver domain
Achr_RS18570	SM00850	LytTr DNA-binding domain
Achr_RS18595	SM01219	Achr_RS18595
Achr_RS18650	SM00938	Nitrogen regulatory protein P-II
Achr_RS18675	SM00857	Resolvase, N terminal domain
Achr_RS18685	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18690	SM00244	prohibitin homologues
Achr_RS18730	SM01060	Achr_RS18730
Achr_RS18760	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS18765	SM01005	Alanine racemase, C-terminal domain
Achr_RS18780	SM00344	helix_turn_helix ASNC type
Achr_RS18790	SM00155	Phospholipase D. Active site motifs.
Achr_RS18815	SM01007	Class II Aldolase and Adducin N-terminal domain
Achr_RS18835	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18840	SM00382	ATPases associated with a variety of cellular activities
Achr_RS18840	SM00962	SRP54-type protein, GTPase domain
Achr_RS18840	SM00963	SRP54-type protein, helical bundle domain
Achr_RS18990	SM00530	Helix-turn-helix XRE-family like proteins 
Achr_RS19080	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS19120	SM00387	Histidine kinase-like ATPases
Achr_RS19120	SM00388	His Kinase A (phosphoacceptor) domain
Achr_RS19125	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19125	SM00448	cheY-homologous receiver domain
Achr_RS19175	SM00858	Achr_RS19175
Achr_RS19185	SM01130	Achr_RS19185
Achr_RS19190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Achr_RS19190	SM00895	Achr_RS19190
Achr_RS19195	SM00532	Ligase N family
Achr_RS19205	SM00996	S-adenosyl-L-homocysteine hydrolase
Achr_RS19205	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Achr_RS19215	SM00487	DEAD-like helicases superfamily
Achr_RS19215	SM00490	helicase superfamily c-terminal domain
Achr_RS19230	SM00867	YceI-like domain 
Achr_RS19255	SM00260	Two component signalling adaptor domain
Achr_RS19265	SM00073	Histidine Phosphotransfer domain
Achr_RS19265	SM00260	Two component signalling adaptor domain
Achr_RS19265	SM00387	Histidine kinase-like ATPases
Achr_RS19265	SM00448	cheY-homologous receiver domain
Achr_RS19265	SM01231	Achr_RS19265
Achr_RS19270	SM00138	Methyltransferase, chemotaxis proteins 
Achr_RS19275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Achr_RS19280	SM00260	Two component signalling adaptor domain
Achr_RS19285	SM00448	cheY-homologous receiver domain
Achr_RS19290	SM00448	cheY-homologous receiver domain
Achr_RS19310	SM00732	Likely ribonuclease with RNase H fold.
Achr_RS19340	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19360	SM01152	Achr_RS19360
Achr_RS19385	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS19470	SM00072	Guanylate kinase homologues.
Achr_RS19480	SM01409	Achr_RS19480
Achr_RS19485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Achr_RS19485	SM00954	Region found in RelA / SpoT proteins
Achr_RS19500	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Achr_RS19500	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19525	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19535	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19570	SM00823	Phosphopantetheine attachment site
Achr_RS19570	SM00824	Thioesterase
Achr_RS19575	SM00823	Phosphopantetheine attachment site
Achr_RS19580	SM00823	Phosphopantetheine attachment site
Achr_RS19585	SM00822	Achr_RS19585
Achr_RS19585	SM00823	Phosphopantetheine attachment site
Achr_RS19585	SM00825	Beta-ketoacyl synthase
Achr_RS19585	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Achr_RS19590	SM00823	Phosphopantetheine attachment site
Achr_RS19605	SM00923	MbtH-like protein
Achr_RS19650	SM00923	MbtH-like protein
Achr_RS19695	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19760	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19785	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19830	SM00900	Achr_RS19830
Achr_RS19855	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Achr_RS19855	SM00091	PAS domain
Achr_RS19855	SM00387	Histidine kinase-like ATPases
Achr_RS19860	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Achr_RS19860	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19865	SM00729	Elongator protein 3, MiaB family, Radical SAM
Achr_RS19885	SM00450	Rhodanese Homology Domain
Achr_RS19895	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Achr_RS19895	SM00382	ATPases associated with a variety of cellular activities
Achr_RS19920	SM00710	Parallel beta-helix repeats
Achr_RS19920	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
Achr_RS19925	SM00710	Parallel beta-helix repeats
Achr_RS19925	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
Achr_RS19930	SM00710	Parallel beta-helix repeats
Achr_RS19930	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
Achr_RS19940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Achr_RS19955	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS20000	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS20005	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS20020	SM00342	helix_turn_helix, arabinose operon control protein
Achr_RS20040	SM00822	Achr_RS20040
Achr_RS20055	SM00642	Alpha-amylase domain
Achr_RS20070	SM00642	Alpha-amylase domain
Achr_RS20085	SM00346	helix_turn_helix isocitrate lyase regulation
Achr_RS20125	SM00052	Putative diguanylate phosphodiesterase
Achr_RS20125	SM00267	diguanylate cyclase
Achr_RS20130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Achr_RS20130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Achr_RS20135	SM00855	Phosphoglycerate mutase family
Achr_RS20150	SM00880	Achr_RS20150
Achr_RS20245	SM00640	Glycosyl hydrolases family 32
Achr_RS20250	SM00642	Alpha-amylase domain
Achr_RS20255	SM00354	helix_turn _helix lactose operon repressor
Achr_RS20270	SM00382	ATPases associated with a variety of cellular activities
Achr_RS20385	SM00420	helix_turn_helix, Deoxyribose operon repressor
Achr_RS20385	SM01134	Achr_RS20385
Achr_RS20430	SM00382	ATPases associated with a variety of cellular activities
Achr_RS20435	SM00327	von Willebrand factor (vWF) type A domain
Achr_RS20460	SM00382	ATPases associated with a variety of cellular activities
Achr_RS20495	SM00382	ATPases associated with a variety of cellular activities
Achr_RS20535	SM00470	ParB-like nuclease domain
Achr_RS20550	SM01228	Achr_RS20550
Achr_RS20565	SM01234	Achr_RS20565
Achr_RS20590	SM00433	TopoisomeraseII
Achr_RS21265	SM00433	TopoisomeraseII
Achr_RS21570	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
Achr_RS22190	SM00382	ATPases associated with a variety of cellular activities
Achr_RS23375	SM00028	Tetratricopeptide repeats
Achr_RS23375	SM00327	von Willebrand factor (vWF) type A domain
