locus-tag	class	description
INQ56_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
INQ56_RS00010	COG0592	DNA-directed DNA polymerase activity
INQ56_RS00015	COG2501	S4 domain
INQ56_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
INQ56_RS00030	COG0187	DNA topoisomerase II activity
INQ56_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
INQ56_RS00070	COG0517	IMP dehydrogenase activity
INQ56_RS00070	COG0516	GMP reductase activity
INQ56_RS00075	COG1686	Belongs to the peptidase S11 family
INQ56_RS00080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS00085	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
INQ56_RS00090	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
INQ56_RS00095	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
INQ56_RS00100	COG0840	transmembrane signaling receptor activity
INQ56_RS00110	COG1428	Deoxynucleoside kinase
INQ56_RS00115	COG1428	Deoxynucleoside kinase
INQ56_RS00120	COG1388	LysM domain
INQ56_RS00120	COG3858	chitin binding
INQ56_RS00125	COG1335	isochorismatase
INQ56_RS00130	COG0590	tRNA wobble adenosine to inosine editing
INQ56_RS00140	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
INQ56_RS00145	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
INQ56_RS00150	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
INQ56_RS00195	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
INQ56_RS00200	COG3853	Toxic anion resistance protein (TelA)
INQ56_RS00205	COG1982	Orn Lys Arg decarboxylase major
INQ56_RS00210	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
INQ56_RS00215	COG3870	Protein conserved in bacteria
INQ56_RS00220	COG1728	Protein conserved in bacteria
INQ56_RS00225	COG0470	DNA polymerase III
INQ56_RS00230	COG1774	PSP1 C-terminal conserved region
INQ56_RS00235	COG4467	Involved in initiation control of chromosome replication
INQ56_RS00240	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
INQ56_RS00245	COG2827	Endonuclease containing a URI domain
INQ56_RS00250	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
INQ56_RS00255	COG2002	toxin-antitoxin pair type II binding
INQ56_RS00260	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INQ56_RS00260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INQ56_RS00265	COG0084	hydrolase, TatD family'
INQ56_RS00270	COG3583	domain protein
INQ56_RS00270	COG3584	3D domain protein
INQ56_RS00275	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
INQ56_RS00280	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
INQ56_RS00290	COG4466	Protein conserved in bacteria
INQ56_RS00300	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
INQ56_RS00305	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
INQ56_RS00310	COG0251	oxidation-reduction process
INQ56_RS00315	COG2088	sporulation resulting in formation of a cellular spore
INQ56_RS00325	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
INQ56_RS00330	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
INQ56_RS00335	COG0193	aminoacyl-tRNA hydrolase activity
INQ56_RS00345	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
INQ56_RS00350	COG2002	toxin-antitoxin pair type II binding
INQ56_RS00355	COG2244	polysaccharide biosynthetic process
INQ56_RS00360	COG3956	TIGRFAM MazG family protein
INQ56_RS00365	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
INQ56_RS00380	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
INQ56_RS00385	COG1098	S1 RNA binding domain
INQ56_RS00400	COG2208	phosphoserine phosphatase activity
INQ56_RS00405	COG2304	oxidoreductase activity
INQ56_RS00410	COG0515	serine threonine protein kinase
INQ56_RS00415	COG0037	tRNA processing
INQ56_RS00420	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
INQ56_RS00425	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
INQ56_RS00430	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
INQ56_RS00435	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
INQ56_RS00440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
INQ56_RS00445	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
INQ56_RS00450	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
INQ56_RS00455	COG0512	Glutamine amidotransferase of anthranilate synthase
INQ56_RS00460	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
INQ56_RS00465	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
INQ56_RS00470	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
INQ56_RS00475	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
INQ56_RS00480	COG1396	sequence-specific DNA binding
INQ56_RS00485	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
INQ56_RS00490	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
INQ56_RS00570	COG4463	regulation of RNA biosynthetic process
INQ56_RS00575	COG3880	PFAM UvrB UvrC protein
INQ56_RS00580	COG3869	Catalyzes the specific phosphorylation of arginine residues in
INQ56_RS00585	COG0542	response to heat
INQ56_RS00590	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
INQ56_RS00595	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
INQ56_RS00600	COG4956	integral membrane protein (PIN domain superfamily)
INQ56_RS00605	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
INQ56_RS00610	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
INQ56_RS00615	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
INQ56_RS00620	COG1045	serine acetyltransferase
INQ56_RS00625	COG0215	cysteine-tRNA ligase activity
INQ56_RS00630	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
INQ56_RS00635	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
INQ56_RS00640	COG3688	RNA-binding protein containing a PIN domain
INQ56_RS00645	COG1595	DNA-templated transcription, initiation
INQ56_RS00650	COG0267	Belongs to the bacterial ribosomal protein bL33 family
INQ56_RS00655	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
INQ56_RS00660	COG0250	Participates in transcription elongation, termination and antitermination
INQ56_RS00670	COG0081	regulation of translation
INQ56_RS00675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
INQ56_RS00680	COG0222	ribosome binding
INQ56_RS00685	COG2813	Specifically methylates the guanine in position
INQ56_RS00690	COG0085	RNA polymerase activity
INQ56_RS00695	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
INQ56_RS00700	COG1358	cellular component organization or biogenesis
INQ56_RS00705	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
INQ56_RS00710	COG0049	tRNA binding
INQ56_RS00715	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
INQ56_RS00720	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
INQ56_RS00725	COG0596	Alpha beta hydrolase
INQ56_RS00735	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
INQ56_RS00740	COG0088	Forms part of the polypeptide exit tunnel
INQ56_RS00745	COG0089	rRNA binding
INQ56_RS00750	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
INQ56_RS00755	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
INQ56_RS00760	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
INQ56_RS00765	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
INQ56_RS00770	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
INQ56_RS00775	COG0255	Belongs to the universal ribosomal protein uL29 family
INQ56_RS00780	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
INQ56_RS00785	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
INQ56_RS00790	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
INQ56_RS00795	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
INQ56_RS00800	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
INQ56_RS00805	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
INQ56_RS00810	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
INQ56_RS00815	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
INQ56_RS00820	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
INQ56_RS00825	COG1841	ribosomal large subunit assembly
INQ56_RS00830	COG0200	Binds to the 23S rRNA
INQ56_RS00835	COG0201	protein transport
INQ56_RS00840	COG0563	adenylate kinase activity
INQ56_RS00845	COG0024	Methionine aminopeptidase
INQ56_RS00850	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
INQ56_RS00855	COG0257	Belongs to the bacterial ribosomal protein bL36 family
INQ56_RS00860	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
INQ56_RS00865	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
INQ56_RS00870	COG0202	RNA polymerase activity
INQ56_RS00875	COG0203	ribosomal protein L17
INQ56_RS00880	COG1122	ATPase activity
INQ56_RS00885	COG1122	ATPase activity
INQ56_RS00890	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INQ56_RS00895	COG0101	tRNA pseudouridine synthase activity
INQ56_RS00900	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
INQ56_RS00905	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
INQ56_RS00910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
INQ56_RS00935	COG0860	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS00940	COG0489	protein tyrosine kinase activity
INQ56_RS00950	COG2194	sulfuric ester hydrolase activity
INQ56_RS00955	COG0726	polysaccharide deacetylase
INQ56_RS00985	COG0659	secondary active sulfate transmembrane transporter activity
INQ56_RS00990	COG0385	Bile acid
INQ56_RS00995	COG3876	Protein conserved in bacteria
INQ56_RS01000	COG1472	Belongs to the glycosyl hydrolase 3 family
INQ56_RS01005	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
INQ56_RS01010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS01010	COG1263	PTS System
INQ56_RS01015	COG1737	Transcriptional regulator
INQ56_RS01020	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
INQ56_RS01055	COG1595	DNA-templated transcription, initiation
INQ56_RS01060	COG5662	AntiSigma factor
INQ56_RS01065	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
INQ56_RS01070	COG4856	YbbR-like protein
INQ56_RS01075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
INQ56_RS01080	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
INQ56_RS01100	COG1131	(ABC) transporter
INQ56_RS01110	COG0577	efflux transmembrane transporter activity
INQ56_RS01110	COG1136	(ABC) transporter
INQ56_RS01120	COG1695	Transcriptional regulator
INQ56_RS01130	COG1131	(ABC) transporter
INQ56_RS01140	COG1413	lyase activity
INQ56_RS01145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS01160	COG2311	Membrane
INQ56_RS01180	COG1476	TRANSCRIPTIONal
INQ56_RS01190	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
INQ56_RS01195	COG2207	Transcriptional regulator
INQ56_RS01200	COG1309	transcriptional regulator
INQ56_RS01215	COG1113	amino acid transport
INQ56_RS01220	COG0584	glycerophosphoryl diester phosphodiesterase
INQ56_RS01225	COG2271	Major facilitator Superfamily
INQ56_RS01235	COG1331	Highly conserved protein containing a thioredoxin domain
INQ56_RS01245	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
INQ56_RS01265	COG0640	Transcriptional regulator
INQ56_RS01280	COG1937	Protein conserved in bacteria
INQ56_RS01285	COG2210	Belongs to the sulfur carrier protein TusA family
INQ56_RS01295	COG0425	Belongs to the sulfur carrier protein TusA family
INQ56_RS01295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
INQ56_RS01300	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
INQ56_RS01300	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS01305	COG0425	Belongs to the sulfur carrier protein TusA family
INQ56_RS01310	COG0730	response to heat
INQ56_RS01320	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
INQ56_RS01325	COG2814	Major facilitator Superfamily
INQ56_RS01340	COG1846	Transcriptional regulator
INQ56_RS01345	COG1683	Conserved Protein
INQ56_RS01355	COG0656	L-ascorbic acid biosynthetic process
INQ56_RS01365	COG0371	Dehydrogenase
INQ56_RS01370	COG1054	Belongs to the UPF0176 family
INQ56_RS01375	COG0531	amino acid
INQ56_RS01385	COG3711	transcriptional antiterminator
INQ56_RS01390	COG2190	(PTS) system
INQ56_RS01390	COG1263	PTS System
INQ56_RS01390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS01395	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS01410	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS01410	COG3711	transcriptional antiterminator
INQ56_RS01415	COG1940	carbohydrate kinase activity
INQ56_RS01420	COG0383	alpha-mannosidase activity
INQ56_RS01425	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS01430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS01435	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS01435	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS01440	COG1404	Belongs to the peptidase S8 family
INQ56_RS01455	COG0833	amino acid
INQ56_RS01460	COG2040	homocysteine
INQ56_RS01465	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
INQ56_RS01485	COG2814	Major facilitator Superfamily
INQ56_RS01490	COG0456	acetyltransferase
INQ56_RS01505	COG1404	Belongs to the peptidase S8 family
INQ56_RS01515	COG1309	transcriptional regulator
INQ56_RS01520	COG1917	Cupin 2, conserved barrel domain protein
INQ56_RS01525	COG1063	alcohol dehydrogenase
INQ56_RS01530	COG1846	Transcriptional regulator
INQ56_RS01535	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS01540	COG0531	amino acid
INQ56_RS01550	COG0596	Alpha beta hydrolase
INQ56_RS01555	COG1115	amino acid carrier protein
INQ56_RS01560	COG2066	Belongs to the glutaminase family
INQ56_RS01565	COG4191	Histidine kinase
INQ56_RS01570	COG0784	Response regulator, receiver
INQ56_RS01575	COG1405	negative regulation of cell septum assembly
INQ56_RS01575	COG3012	SEC-C Motif Domain Protein
INQ56_RS01585	COG0667	Aldo Keto reductase
INQ56_RS01590	COG3290	protein histidine kinase activity
INQ56_RS01595	COG3279	Response regulator of the LytR AlgR family
INQ56_RS01600	COG4555	ABC transporter
INQ56_RS01605	COG1668	transmembrane transport
INQ56_RS01620	COG3773	Cell wall hydrolase
INQ56_RS01625	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS01635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS01640	COG2310	stress, protein
INQ56_RS01645	COG2310	stress, protein
INQ56_RS01650	COG2310	stress, protein
INQ56_RS01655	COG0861	Integral membrane protein TerC family
INQ56_RS01685	COG3853	Toxic anion resistance protein (TelA)
INQ56_RS01690	COG0517	IMP dehydrogenase activity
INQ56_RS01690	COG4175	Glycine betaine
INQ56_RS01695	COG4176	ABC-type proline glycine betaine transport system permease component
INQ56_RS01700	COG2113	Glycine betaine
INQ56_RS01715	COG1473	amidohydrolase
INQ56_RS01720	COG1288	antiporter activity
INQ56_RS01725	COG0039	L-malate dehydrogenase activity
INQ56_RS01730	COG1620	l-lactate permease
INQ56_RS01735	COG1609	Transcriptional regulator
INQ56_RS01740	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
INQ56_RS01745	COG0561	phosphatase activity
INQ56_RS01750	COG0673	inositol 2-dehydrogenase activity
INQ56_RS01755	COG0738	Major facilitator superfamily
INQ56_RS01760	COG1280	lysine exporter protein (LysE YggA)
INQ56_RS01775	COG3403	YqcI/YcgG family
INQ56_RS01780	COG1113	amino acid transport
INQ56_RS01785	COG3665	Urea carboxylase-associated protein
INQ56_RS01790	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
INQ56_RS01800	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS01805	COG0710	3-dehydroquinate dehydratase activity
INQ56_RS01810	COG0028	Belongs to the TPP enzyme family
INQ56_RS01820	COG1804	L-carnitine dehydratase bile acid-inducible protein F
INQ56_RS01825	COG2271	Major facilitator Superfamily
INQ56_RS01840	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
INQ56_RS01845	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
INQ56_RS01855	COG0477	Major facilitator Superfamily
INQ56_RS01860	COG2226	methyltransferase
INQ56_RS01865	COG0583	DNA-binding transcription factor activity
INQ56_RS01870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
INQ56_RS01875	COG3458	cephalosporin-C deacetylase activity
INQ56_RS01885	COG3541	Predicted nucleotidyltransferase
INQ56_RS01890	COG0506	proline dehydrogenase activity
INQ56_RS01895	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS01900	COG2508	Transcriptional regulator
INQ56_RS01905	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
INQ56_RS01910	COG0765	amino acid transport
INQ56_RS01915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS01925	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
INQ56_RS01930	COG1522	sequence-specific DNA binding
INQ56_RS01935	COG2746	aminoglycoside 3-N-acetyltransferase activity
INQ56_RS01945	COG3290	protein histidine kinase activity
INQ56_RS01945	COG0840	transmembrane signaling receptor activity
INQ56_RS01950	COG3209	COG3209 Rhs family protein
INQ56_RS01970	COG3842	ATPase activity
INQ56_RS01975	COG1176	ABC-type spermidine putrescine transport system, permease component I
INQ56_RS01985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
INQ56_RS01990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
INQ56_RS01995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
INQ56_RS02010	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
INQ56_RS02015	COG0697	spore germination
INQ56_RS02020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS02035	COG2364	Membrane
INQ56_RS02045	COG3764	Sortase (surface protein transpeptidase)
INQ56_RS02050	COG2002	toxin-antitoxin pair type II binding
INQ56_RS02055	COG1126	abc transporter atp-binding protein
INQ56_RS02060	COG0765	amino acid transport
INQ56_RS02065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS02070	COG0412	Dienelactone hydrolase
INQ56_RS02075	COG0833	amino acid
INQ56_RS02080	COG3104	oligopeptide transport
INQ56_RS02085	COG5434	Belongs to the glycosyl hydrolase 28 family
INQ56_RS02090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS02095	COG0456	acetyltransferase
INQ56_RS02100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS02105	COG0765	amino acid transport
INQ56_RS02110	COG1126	abc transporter atp-binding protein
INQ56_RS02115	COG1473	amidohydrolase
INQ56_RS02120	COG2079	MmgE PrpD family protein
INQ56_RS02130	COG0745	RESPONSE REGULATOR receiver
INQ56_RS02135	COG5002	protein histidine kinase activity
INQ56_RS02135	COG3850	Histidine kinase
INQ56_RS02140	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS02145	COG0527	aspartate kinase activity
INQ56_RS02150	COG2814	Major facilitator Superfamily
INQ56_RS02155	COG1309	transcriptional regulator
INQ56_RS02165	COG0640	Transcriptional regulator
INQ56_RS02175	COG0583	DNA-binding transcription factor activity
INQ56_RS02180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS02185	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
INQ56_RS02190	COG0531	amino acid
INQ56_RS02195	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS02200	COG2249	NAD(P)H dehydrogenase (quinone) activity
INQ56_RS02205	COG4549	nuclear export factor GLE1
INQ56_RS02210	COG1276	copper resistance
INQ56_RS02210	COG2372	response to copper ion
INQ56_RS02215	COG2213	PTS system mannitol-specific
INQ56_RS02220	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS02225	COG0246	Mannitol dehydrogenase
INQ56_RS02230	COG0840	transmembrane signaling receptor activity
INQ56_RS02265	COG0346	lactoylglutathione lyase activity
INQ56_RS02275	COG0561	phosphatase activity
INQ56_RS02295	COG0457	Tetratricopeptide repeat
INQ56_RS02300	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
INQ56_RS02305	COG1914	H( )-stimulated, divalent metal cation uptake system
INQ56_RS02310	COG4336	lyase activity
INQ56_RS02315	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
INQ56_RS02320	COG1984	allophanate hydrolase subunit 2
INQ56_RS02325	COG1414	Transcriptional regulator
INQ56_RS02330	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
INQ56_RS02335	COG2755	lipolytic protein G-D-S-L family
INQ56_RS02345	COG3711	transcriptional antiterminator
INQ56_RS02350	COG2226	methyltransferase
INQ56_RS02355	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS02360	COG3871	stress protein (general stress protein 26)
INQ56_RS02380	COG2814	Major facilitator Superfamily
INQ56_RS02385	COG1802	Transcriptional regulator
INQ56_RS02395	COG0697	spore germination
INQ56_RS02400	COG0473	3-isopropylmalate dehydrogenase activity
INQ56_RS02405	COG0551	DNA topoisomerase type I activity
INQ56_RS02405	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
INQ56_RS02410	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
INQ56_RS02415	COG3706	GGDEF domain
INQ56_RS02420	COG5298	Protein conserved in bacteria
INQ56_RS02425	COG1215	transferase activity, transferring glycosyl groups
INQ56_RS02435	COG0531	amino acid
INQ56_RS02440	COG0028	Belongs to the TPP enzyme family
INQ56_RS02445	COG5444	nuclease activity
INQ56_RS02470	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
INQ56_RS02475	COG1914	H( )-stimulated, divalent metal cation uptake system
INQ56_RS02480	COG2261	transglycosylase associated protein
INQ56_RS02485	COG2217	Heavy metal translocating P-type atpase
INQ56_RS02490	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
INQ56_RS02495	COG3290	protein histidine kinase activity
INQ56_RS02500	COG4565	transcriptional regulatory protein
INQ56_RS02505	COG1301	dicarboxylic acid transport
INQ56_RS02510	COG0628	permease
INQ56_RS02515	COG1301	dicarboxylic acid transport
INQ56_RS02520	COG1131	(ABC) transporter
INQ56_RS02525	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
INQ56_RS02540	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS02545	COG1181	Belongs to the D-alanine--D-alanine ligase family
INQ56_RS02550	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
INQ56_RS02565	COG0513	Belongs to the DEAD box helicase family
INQ56_RS02570	COG3402	PFAM membrane-flanked domain
INQ56_RS02575	COG3428	Bacterial PH domain
INQ56_RS02580	COG0705	Rhomboid family
INQ56_RS02585	COG0736	holo-[acyl-carrier-protein] synthase activity
INQ56_RS02590	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
INQ56_RS02595	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
INQ56_RS02600	COG0864	Transcriptional regulator
INQ56_RS02605	COG2337	Toxic component of a toxin-antitoxin (TA) module
INQ56_RS02610	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS02615	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS02620	COG2172	sigma factor antagonist activity
INQ56_RS02625	COG2208	phosphoserine phosphatase activity
INQ56_RS02630	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS02635	COG2172	sigma factor antagonist activity
INQ56_RS02640	COG1191	sigma factor activity
INQ56_RS02645	COG2208	phosphoserine phosphatase activity
INQ56_RS02650	COG2183	response to ionizing radiation
INQ56_RS02660	COG3091	SprT-like family
INQ56_RS02665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
INQ56_RS02670	COG0022	dehydrogenase e1 component
INQ56_RS02675	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS02680	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
INQ56_RS02685	COG3284	Transcriptional regulator
INQ56_RS02725	COG1309	transcriptional regulator
INQ56_RS02730	COG0596	Alpha beta hydrolase
INQ56_RS02730	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS02735	COG1902	pentaerythritol trinitrate reductase activity
INQ56_RS02740	COG0300	oxidoreductase activity
INQ56_RS02750	COG0604	alcohol dehydrogenase
INQ56_RS02755	COG1278	Cold shock
INQ56_RS02760	COG1329	Transcriptional regulator
INQ56_RS02765	COG1064	alcohol dehydrogenase
INQ56_RS02770	COG0789	Transcriptional regulator
INQ56_RS02785	COG0477	Major facilitator Superfamily
INQ56_RS02790	COG0657	acetylesterase activity
INQ56_RS02800	COG4221	oxidoreductase activity
INQ56_RS02815	COG0252	asparaginase activity
INQ56_RS02835	COG2814	Major facilitator Superfamily
INQ56_RS02840	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
INQ56_RS02845	COG2409	Drug exporters of the RND superfamily
INQ56_RS02850	COG4585	Histidine kinase
INQ56_RS02855	COG2197	response regulator
INQ56_RS02900	COG1309	transcriptional regulator
INQ56_RS02905	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
INQ56_RS02910	COG1846	Transcriptional regulator
INQ56_RS02915	COG0778	Nitroreductase
INQ56_RS02930	COG1396	sequence-specific DNA binding
INQ56_RS02940	COG0456	acetyltransferase
INQ56_RS02945	COG0583	DNA-binding transcription factor activity
INQ56_RS02950	COG0667	Aldo Keto reductase
INQ56_RS02960	COG4122	O-methyltransferase activity
INQ56_RS02970	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
INQ56_RS02975	COG0697	spore germination
INQ56_RS02985	COG1301	dicarboxylic acid transport
INQ56_RS03025	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
INQ56_RS03030	COG0802	atpase or kinase
INQ56_RS03035	COG1214	PFAM Peptidase M22, glycoprotease
INQ56_RS03040	COG0456	acetyltransferase
INQ56_RS03045	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
INQ56_RS03050	COG0488	(ABC) transporter
INQ56_RS03055	COG0315	cyclic pyranopterin monophosphate synthase activity
INQ56_RS03060	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
INQ56_RS03065	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
INQ56_RS03070	COG0805	protein transport
INQ56_RS03085	COG1266	CAAX protease self-immunity
INQ56_RS03090	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
INQ56_RS03095	COG0459	protein refolding
INQ56_RS03100	COG1846	Transcriptional regulator
INQ56_RS03105	COG0456	acetyltransferase
INQ56_RS03110	COG2808	Putative FMN-binding domain
INQ56_RS03140	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
INQ56_RS03145	COG0823	Involved in the tonB-independent uptake of proteins
INQ56_RS03155	COG2132	Multicopper oxidase
INQ56_RS03160	COG1113	amino acid transport
INQ56_RS03165	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
INQ56_RS03170	COG0714	Associated with various cellular activities
INQ56_RS03175	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
INQ56_RS03180	COG1305	Transglutaminase-like
INQ56_RS03185	COG0518	GMP synthase (glutamine-hydrolyzing) activity
INQ56_RS03185	COG0519	Catalyzes the synthesis of GMP from XMP
INQ56_RS03190	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
INQ56_RS03195	COG1609	Transcriptional regulator
INQ56_RS03195	COG2207	Transcriptional regulator
INQ56_RS03200	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
INQ56_RS03250	COG1595	DNA-templated transcription, initiation
INQ56_RS03260	COG2814	Major facilitator Superfamily
INQ56_RS03265	COG0583	DNA-binding transcription factor activity
INQ56_RS03270	COG2252	PERMEase
INQ56_RS03280	COG5583	Uncharacterized small protein (DUF2292)
INQ56_RS03285	COG3064	Membrane
INQ56_RS03290	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
INQ56_RS03300	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
INQ56_RS03305	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
INQ56_RS03310	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
INQ56_RS03315	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
INQ56_RS03320	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
INQ56_RS03325	COG0047	phosphoribosylformylglycinamidine synthase activity
INQ56_RS03330	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
INQ56_RS03335	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
INQ56_RS03340	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
INQ56_RS03345	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
INQ56_RS03350	COG0138	bifunctional purine biosynthesis protein purh
INQ56_RS03355	COG0151	Belongs to the GarS family
INQ56_RS03375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
INQ56_RS03380	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
INQ56_RS03385	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
INQ56_RS03390	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
INQ56_RS03400	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
INQ56_RS03405	COG4496	protein, YerC YecD
INQ56_RS03415	COG0069	glutamate synthase activity
INQ56_RS03430	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
INQ56_RS03435	COG0210	DNA helicase
INQ56_RS03440	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
INQ56_RS03445	COG4851	CamS sex pheromone cAM373 precursor
INQ56_RS03450	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
INQ56_RS03455	COG1285	pathogenesis
INQ56_RS03460	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
INQ56_RS03465	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
INQ56_RS03470	COG0154	amidase activity
INQ56_RS03475	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
INQ56_RS03480	COG1309	transcriptional regulator
INQ56_RS03485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
INQ56_RS03490	COG1957	nucleoside hydrolase
INQ56_RS03495	COG1597	lipid kinase activity
INQ56_RS03500	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
INQ56_RS03520	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
INQ56_RS03535	COG1959	2 iron, 2 sulfur cluster binding
INQ56_RS03540	COG0492	ferredoxin-NADP+ reductase activity
INQ56_RS03555	COG1486	melibiose metabolic process
INQ56_RS03565	COG2211	Major facilitator Superfamily
INQ56_RS03595	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
INQ56_RS03600	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
INQ56_RS03605	COG1442	glycosyl transferase family 8
INQ56_RS03610	COG1216	Glycosyl transferase, family 2
INQ56_RS03615	COG1442	glycosyl transferase family 8
INQ56_RS03620	COG2223	nitrite transmembrane transporter activity
INQ56_RS03630	COG0471	metal ion transport
INQ56_RS03645	COG0071	Belongs to the small heat shock protein (HSP20) family
INQ56_RS03660	COG0531	amino acid
INQ56_RS03665	COG0463	Glycosyl transferase, family 2
INQ56_RS03665	COG0457	Tetratricopeptide repeat
INQ56_RS03670	COG0488	(ABC) transporter
INQ56_RS03675	COG1469	GTP cyclohydrolase I activity
INQ56_RS03680	COG0789	Transcriptional regulator
INQ56_RS03685	COG2814	Major facilitator Superfamily
INQ56_RS03690	COG0488	(ABC) transporter
INQ56_RS03695	COG0513	Belongs to the DEAD box helicase family
INQ56_RS03700	COG2130	NADP-dependent
INQ56_RS03720	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS03720	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS03735	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INQ56_RS03735	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INQ56_RS03745	COG3290	protein histidine kinase activity
INQ56_RS03750	COG4565	transcriptional regulatory protein
INQ56_RS03755	COG3181	Tripartite tricarboxylate transporter family receptor
INQ56_RS03760	COG2851	Citrate transporter
INQ56_RS03770	COG3479	Phenolic acid decarboxylase
INQ56_RS03775	COG1695	Transcriptional regulator
INQ56_RS03780	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
INQ56_RS03790	COG1254	Belongs to the acylphosphatase family
INQ56_RS03795	COG2258	MOSC domain
INQ56_RS03810	COG0024	Methionine aminopeptidase
INQ56_RS03815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS03815	COG1263	PTS System
INQ56_RS03820	COG3739	integral membrane protein
INQ56_RS03835	COG1368	sulfuric ester hydrolase activity
INQ56_RS03840	COG0076	glutamate decarboxylase activity
INQ56_RS03845	COG0840	transmembrane signaling receptor activity
INQ56_RS03855	COG1263	PTS System
INQ56_RS03855	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS03860	COG0366	Alpha amylase catalytic
INQ56_RS03865	COG2188	Transcriptional regulator
INQ56_RS03875	COG0737	Belongs to the 5'-nucleotidase family
INQ56_RS03880	COG0693	protein deglycase activity
INQ56_RS03885	COG4840	Belongs to the UPF0435 family
INQ56_RS03890	COG1115	amino acid carrier protein
INQ56_RS03895	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
INQ56_RS03900	COG4980	gas vesicle protein
INQ56_RS03905	COG1295	ribonuclease BN
INQ56_RS03915	COG0477	Major facilitator Superfamily
INQ56_RS03925	COG0387	Pfam Sodium calcium exchanger
INQ56_RS03935	COG0217	transcriptional regulatory protein
INQ56_RS03945	COG0668	transmembrane transport
INQ56_RS03950	COG0535	radical SAM domain protein
INQ56_RS03960	COG0726	polysaccharide deacetylase
INQ56_RS03970	COG0598	Magnesium transport protein CorA
INQ56_RS03980	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
INQ56_RS03985	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
INQ56_RS04030	COG0789	Transcriptional regulator
INQ56_RS04035	COG2814	Major facilitator Superfamily
INQ56_RS04085	COG2076	Multidrug Resistance protein
INQ56_RS04090	COG2076	Multidrug Resistance protein
INQ56_RS04095	COG1309	transcriptional regulator
INQ56_RS04105	COG4637	Psort location Cytoplasmic, score
INQ56_RS04110	COG2755	lipolytic protein G-D-S-L family
INQ56_RS04115	COG0492	ferredoxin-NADP+ reductase activity
INQ56_RS04120	COG2169	Transcriptional regulator
INQ56_RS04125	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
INQ56_RS04130	COG1132	(ABC) transporter
INQ56_RS04135	COG1742	UPF0060 membrane protein
INQ56_RS04140	COG1595	DNA-templated transcription, initiation
INQ56_RS04160	COG2318	DinB family
INQ56_RS04170	COG1846	Transcriptional regulator
INQ56_RS04175	COG0392	lysyltransferase activity
INQ56_RS04175	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
INQ56_RS04195	COG0778	Nitroreductase
INQ56_RS04215	COG1090	epimerase
INQ56_RS04220	COG2137	regulation of response to DNA damage stimulus
INQ56_RS04245	COG0463	Glycosyl transferase, family 2
INQ56_RS04250	COG4485	Bacterial membrane protein, YfhO
INQ56_RS04270	COG2140	Oxalate decarboxylase
INQ56_RS04280	COG1191	sigma factor activity
INQ56_RS04290	COG1988	membrane-bound metal-dependent
INQ56_RS04295	COG1194	a g-specific adenine glycosylase
INQ56_RS04305	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS04320	COG3557	Belongs to the UPF0374 family
INQ56_RS04325	COG1132	(ABC) transporter
INQ56_RS04330	COG0444	Belongs to the ABC transporter superfamily
INQ56_RS04335	COG4608	Belongs to the ABC transporter superfamily
INQ56_RS04340	COG0747	negative chemotaxis
INQ56_RS04345	COG0601	transmembrane transport
INQ56_RS04350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
INQ56_RS04355	COG4129	membrane
INQ56_RS04360	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
INQ56_RS04365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
INQ56_RS04370	COG0735	belongs to the Fur family
INQ56_RS04530	COG1368	sulfuric ester hydrolase activity
INQ56_RS04535	COG0681	Belongs to the peptidase S26 family
INQ56_RS04545	COG2873	o-acetylhomoserine
INQ56_RS04555	COG1116	anion transmembrane transporter activity
INQ56_RS04560	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
INQ56_RS04565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
INQ56_RS04570	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS04580	COG1131	(ABC) transporter
INQ56_RS04610	COG3382	B3 4 domain protein
INQ56_RS04615	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
INQ56_RS04625	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
INQ56_RS04630	COG2766	serine protein kinase
INQ56_RS04635	COG2718	Belongs to the UPF0229 family
INQ56_RS04640	COG1566	PFAM secretion protein HlyD family protein
INQ56_RS04645	COG2814	Major facilitator Superfamily
INQ56_RS04650	COG0655	NAD(P)H dehydrogenase (quinone) activity
INQ56_RS04660	COG1278	Cold shock
INQ56_RS04665	COG3706	GGDEF domain
INQ56_RS04690	COG5577	PFAM Coat F domain
INQ56_RS04695	COG5002	protein histidine kinase activity
INQ56_RS04700	COG4085	toxin activity
INQ56_RS04700	COG0737	Belongs to the 5'-nucleotidase family
INQ56_RS04700	COG1525	nuclease
INQ56_RS04705	COG3764	Sortase (surface protein transpeptidase)
INQ56_RS04710	COG0564	pseudouridine synthase activity
INQ56_RS04720	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
INQ56_RS04725	COG3153	acetyltransferase
INQ56_RS04725	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
INQ56_RS04745	COG3835	regulator
INQ56_RS04750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
INQ56_RS04755	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
INQ56_RS04760	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
INQ56_RS04765	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
INQ56_RS04770	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
INQ56_RS04775	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
INQ56_RS04780	COG4585	Histidine kinase
INQ56_RS04780	COG2203	Gaf domain
INQ56_RS04785	COG2197	response regulator
INQ56_RS04800	COG0753	catalase activity
INQ56_RS04805	COG1959	2 iron, 2 sulfur cluster binding
INQ56_RS04810	COG1017	nitric oxide dioxygenase activity
INQ56_RS04810	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
INQ56_RS04815	COG2719	SpoVR family
INQ56_RS04825	COG1785	Belongs to the alkaline phosphatase family
INQ56_RS04830	COG1388	LysM domain
INQ56_RS04830	COG0791	NLP P60 protein
INQ56_RS04845	COG1595	DNA-templated transcription, initiation
INQ56_RS04850	COG0204	Acyl-transferase
INQ56_RS04855	COG1253	flavin adenine dinucleotide binding
INQ56_RS04860	COG0789	Transcriptional regulator
INQ56_RS04865	COG1253	flavin adenine dinucleotide binding
INQ56_RS04880	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
INQ56_RS04885	COG0584	glycerophosphoryl diester phosphodiesterase
INQ56_RS04895	COG0668	transmembrane transport
INQ56_RS04900	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
INQ56_RS04905	COG0726	polysaccharide deacetylase
INQ56_RS04910	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
INQ56_RS04915	COG0589	response to stress
INQ56_RS04920	COG1132	(ABC) transporter
INQ56_RS04925	COG1132	(ABC) transporter
INQ56_RS04930	COG0702	epimerase
INQ56_RS04940	COG3842	ATPase activity
INQ56_RS04945	COG2508	Transcriptional regulator
INQ56_RS04955	COG0189	ligase activity
INQ56_RS04965	COG4399	Belongs to the UPF0754 family
INQ56_RS04970	COG3679	Belongs to the UPF0342 family
INQ56_RS04975	COG0561	phosphatase activity
INQ56_RS04980	COG0635	Involved in the biosynthesis of porphyrin-containing compound
INQ56_RS04990	COG0475	glutathione-regulated potassium exporter activity
INQ56_RS04995	COG0490	domain, Protein
INQ56_RS05005	COG1024	Enoyl-CoA hydratase
INQ56_RS05015	COG0420	3'-5' exonuclease activity
INQ56_RS05020	COG4717	serine-type aminopeptidase activity
INQ56_RS05025	COG3481	metal-dependent phosphohydrolase, HD sub domain
INQ56_RS05035	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
INQ56_RS05060	COG1846	Transcriptional regulator
INQ56_RS05065	COG4980	gas vesicle protein
INQ56_RS05080	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
INQ56_RS05085	COG0537	adenosine 5'-monophosphoramidase activity
INQ56_RS05090	COG1131	(ABC) transporter
INQ56_RS05095	COG4473	ABC transporter
INQ56_RS05105	COG1473	amidohydrolase
INQ56_RS05115	COG2329	Antibiotic biosynthesis monooxygenase
INQ56_RS05120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
INQ56_RS05125	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
INQ56_RS05130	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
INQ56_RS05135	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
INQ56_RS05140	COG1309	transcriptional regulator
INQ56_RS05145	COG1511	domain protein
INQ56_RS05150	COG1363	Peptidase, m42
INQ56_RS05155	COG1301	dicarboxylic acid transport
INQ56_RS05165	COG1234	tRNA 3'-trailer cleavage
INQ56_RS05170	COG0095	Lipoate-protein ligase
INQ56_RS05175	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS05185	COG0501	Belongs to the peptidase M48B family
INQ56_RS05190	COG1404	Belongs to the peptidase S8 family
INQ56_RS05195	COG0406	alpha-ribazole phosphatase activity
INQ56_RS05200	COG0840	transmembrane signaling receptor activity
INQ56_RS05205	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
INQ56_RS05205	COG0723	plastoquinol--plastocyanin reductase activity
INQ56_RS05210	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS05220	COG4903	ComK protein
INQ56_RS05235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS05240	COG2814	Major facilitator Superfamily
INQ56_RS05245	COG2732	(Barnase) inhibitor
INQ56_RS05250	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS05255	COG4605	iron ion homeostasis
INQ56_RS05260	COG4604	ABC transporter, ATP-binding protein
INQ56_RS05265	COG4607	ABC-type enterochelin transport system periplasmic component
INQ56_RS05270	COG1316	TRANSCRIPTIONal
INQ56_RS05285	COG0398	Pfam SNARE associated Golgi protein
INQ56_RS05290	COG0681	Belongs to the peptidase S26 family
INQ56_RS05295	COG3180	Ammonia monooxygenase
INQ56_RS05310	COG2259	Doxx family
INQ56_RS05315	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
INQ56_RS05320	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
INQ56_RS05325	COG1074	ATP-dependent DNA helicase activity
INQ56_RS05330	COG0420	3'-5' exonuclease activity
INQ56_RS05335	COG0419	ATPase involved in DNA repair
INQ56_RS05340	COG1403	HNH endonuclease
INQ56_RS05380	COG5337	Spore coat protein CotH
INQ56_RS05390	COG0179	Fumarylacetoacetate (FAA) hydrolase
INQ56_RS05405	COG0367	asparagine synthase
INQ56_RS05420	COG1562	ergosterol biosynthetic process
INQ56_RS05425	COG0534	Mate efflux family protein
INQ56_RS05430	COG1917	Cupin 2, conserved barrel domain protein
INQ56_RS05430	COG2207	Transcriptional regulator
INQ56_RS05455	COG0076	glutamate decarboxylase activity
INQ56_RS05490	COG1410	methionine synthase
INQ56_RS05490	COG0646	methionine synthase
INQ56_RS05495	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
INQ56_RS05495	COG0646	methionine synthase
INQ56_RS05500	COG1666	GTP binding
INQ56_RS05505	COG2996	Protein conserved in bacteria
INQ56_RS05510	COG1744	ABC transporter substrate-binding protein PnrA-like
INQ56_RS05515	COG0840	transmembrane signaling receptor activity
INQ56_RS05520	COG1307	EDD domain protein, DegV family
INQ56_RS05525	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
INQ56_RS05545	COG0561	phosphatase activity
INQ56_RS05550	COG1073	alpha beta
INQ56_RS05555	COG2151	metal-sulfur cluster biosynthetic enzyme
INQ56_RS05560	COG0277	FAD linked oxidase domain protein
INQ56_RS05565	COG2271	Major facilitator Superfamily
INQ56_RS05570	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
INQ56_RS05575	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
INQ56_RS05580	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
INQ56_RS05585	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
INQ56_RS05590	COG0505	Belongs to the CarA family
INQ56_RS05595	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
INQ56_RS05600	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
INQ56_RS05610	COG2814	Major facilitator Superfamily
INQ56_RS05620	COG2267	carboxylic ester hydrolase activity
INQ56_RS05630	COG1744	ABC transporter substrate-binding protein PnrA-like
INQ56_RS05645	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
INQ56_RS05650	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
INQ56_RS05655	COG5504	Zn-dependent protease
INQ56_RS05660	COG0444	Belongs to the ABC transporter superfamily
INQ56_RS05665	COG4608	Belongs to the ABC transporter superfamily
INQ56_RS05675	COG0601	transmembrane transport
INQ56_RS05680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
INQ56_RS05690	COG0180	Tryptophanyl-tRNA synthetase
INQ56_RS05695	COG4166	transmembrane transport
INQ56_RS05700	COG0601	transmembrane transport
INQ56_RS05705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
INQ56_RS05710	COG0444	Belongs to the ABC transporter superfamily
INQ56_RS05715	COG4608	Belongs to the ABC transporter superfamily
INQ56_RS05735	COG0456	acetyltransferase
INQ56_RS05740	COG1393	Belongs to the ArsC family
INQ56_RS05745	COG0861	Integral membrane protein TerC family
INQ56_RS05750	COG4862	establishment of competence for transformation
INQ56_RS05755	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INQ56_RS05765	COG1164	Oligoendopeptidase f
INQ56_RS05775	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
INQ56_RS05780	COG2346	COG2346, Truncated hemoglobins
INQ56_RS05785	COG0741	lytic transglycosylase activity
INQ56_RS05790	COG4116	CYTH
INQ56_RS05800	COG2357	RelA SpoT domain protein
INQ56_RS05805	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
INQ56_RS05810	COG0564	pseudouridine synthase activity
INQ56_RS05815	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
INQ56_RS05820	COG0475	glutathione-regulated potassium exporter activity
INQ56_RS05820	COG0569	domain protein
INQ56_RS05825	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
INQ56_RS05830	COG0352	thiamine-phosphate diphosphorylase activity
INQ56_RS05840	COG2104	thiamine diphosphate biosynthetic process
INQ56_RS05845	COG2022	thiamine diphosphate biosynthetic process
INQ56_RS05850	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
INQ56_RS05855	COG0351	phosphomethylpyrimidine kinase
INQ56_RS05860	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
INQ56_RS05915	COG0210	DNA helicase
INQ56_RS05925	COG2153	protein acetylation
INQ56_RS05930	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
INQ56_RS05935	COG2382	esterase
INQ56_RS05940	COG0626	cystathionine gamma-synthase activity
INQ56_RS05945	COG0626	cystathionine gamma-synthase activity
INQ56_RS05990	COG3677	Transposase
INQ56_RS06035	COG0825	malonyl-CoA metabolic process
INQ56_RS06095	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
INQ56_RS06100	COG0583	DNA-binding transcription factor activity
INQ56_RS06120	COG0583	DNA-binding transcription factor activity
INQ56_RS06125	COG2807	transmembrane transport
INQ56_RS06145	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
INQ56_RS06165	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
INQ56_RS06170	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
INQ56_RS06190	COG4195	phage-related replication protein
INQ56_RS06195	COG2856	Zn peptidase
INQ56_RS06200	COG3409	Peptidoglycan-binding domain 1 protein
INQ56_RS06200	COG5632	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS06215	COG0306	phosphate transporter
INQ56_RS06220	COG1392	Phosphate transport regulator
INQ56_RS06230	COG0405	Gamma-glutamyltransferase
INQ56_RS06235	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
INQ56_RS06245	COG4208	sulfate ABC transporter
INQ56_RS06250	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
INQ56_RS06260	COG3775	system Galactitol-specific IIC component
INQ56_RS06275	COG1063	alcohol dehydrogenase
INQ56_RS06280	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
INQ56_RS06285	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS06285	COG0022	dehydrogenase e1 component
INQ56_RS06290	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS06295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
INQ56_RS06300	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS06305	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS06310	COG2390	Transcriptional regulator
INQ56_RS06320	COG0531	amino acid
INQ56_RS06325	COG0346	lactoylglutathione lyase activity
INQ56_RS06330	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
INQ56_RS06335	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
INQ56_RS06340	COG2362	D-Aminopeptidase
INQ56_RS06345	COG0601	transmembrane transport
INQ56_RS06350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
INQ56_RS06355	COG0444	Belongs to the ABC transporter superfamily
INQ56_RS06360	COG4166	transmembrane transport
INQ56_RS06365	COG1619	proteins homologs of microcin C7 resistance protein MccF
INQ56_RS06370	COG4948	Mandelate Racemase Muconate Lactonizing
INQ56_RS06375	COG0791	NLP P60 protein
INQ56_RS06380	COG4608	Belongs to the ABC transporter superfamily
INQ56_RS06385	COG1834	amidinotransferase
INQ56_RS06390	COG1607	acyl-coa hydrolase
INQ56_RS06395	COG1695	Transcriptional regulator
INQ56_RS06410	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
INQ56_RS06420	COG2076	Multidrug Resistance protein
INQ56_RS06425	COG2076	Multidrug Resistance protein
INQ56_RS06435	COG0788	formyltetrahydrofolate deformylase activity
INQ56_RS06440	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
INQ56_RS06445	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
INQ56_RS06450	COG0457	Tetratricopeptide repeat
INQ56_RS06460	COG1764	response to oxidative stress
INQ56_RS06465	COG1846	Transcriptional regulator
INQ56_RS06470	COG1764	response to oxidative stress
INQ56_RS06475	COG0590	tRNA wobble adenosine to inosine editing
INQ56_RS06480	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
INQ56_RS06485	COG1404	Belongs to the peptidase S8 family
INQ56_RS06500	COG0745	RESPONSE REGULATOR receiver
INQ56_RS06505	COG3850	Histidine kinase
INQ56_RS06505	COG5002	protein histidine kinase activity
INQ56_RS06510	COG3212	peptidase
INQ56_RS06515	COG3212	peptidase
INQ56_RS06525	COG2239	Acts as a magnesium transporter
INQ56_RS06535	COG0583	DNA-binding transcription factor activity
INQ56_RS06545	COG0789	Transcriptional regulator
INQ56_RS06560	COG1846	Transcriptional regulator
INQ56_RS06565	COG5001	Diguanylate cyclase
INQ56_RS06565	COG3300	MHYT domain
INQ56_RS06570	COG0586	Pfam SNARE associated Golgi protein
INQ56_RS06575	COG0861	Integral membrane protein TerC family
INQ56_RS06580	COG1191	sigma factor activity
INQ56_RS06600	COG0501	Belongs to the peptidase M48B family
INQ56_RS06605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
INQ56_RS06610	COG2323	membrane
INQ56_RS06625	COG3594	Acyltransferase
INQ56_RS06630	COG5002	protein histidine kinase activity
INQ56_RS06635	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
INQ56_RS06640	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
INQ56_RS06645	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
INQ56_RS06650	COG0436	Aminotransferase
INQ56_RS06655	COG1850	ribulose-bisphosphate carboxylase activity
INQ56_RS06660	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
INQ56_RS06665	COG0235	Class ii aldolase
INQ56_RS06670	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
INQ56_RS06680	COG3852	Histidine kinase
INQ56_RS06685	COG1846	Transcriptional regulator
INQ56_RS06690	COG1360	Flagellar Motor Protein
INQ56_RS06695	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
INQ56_RS06705	COG0542	response to heat
INQ56_RS06710	COG3949	Membrane
INQ56_RS06715	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
INQ56_RS06720	COG0720	synthase
INQ56_RS06725	COG0602	queuosine metabolic process
INQ56_RS06730	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
INQ56_RS06740	COG4873	Protein conserved in bacteria
INQ56_RS06750	COG3773	Cell wall hydrolase
INQ56_RS06755	COG2244	polysaccharide biosynthetic process
INQ56_RS06760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS06765	COG2217	Heavy metal translocating P-type atpase
INQ56_RS06770	COG0006	proline dipeptidase activity
INQ56_RS06775	COG1609	Transcriptional regulator
INQ56_RS06780	COG3711	transcriptional antiterminator
INQ56_RS06785	COG1263	PTS System
INQ56_RS06785	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS06785	COG2190	(PTS) system
INQ56_RS06790	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS06795	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
INQ56_RS06805	COG1533	DNA photolyase activity
INQ56_RS06810	COG0840	transmembrane signaling receptor activity
INQ56_RS06820	COG2084	Dehydrogenase
INQ56_RS06825	COG2340	Cysteine-rich secretory protein family
INQ56_RS06830	COG0768	penicillin binding
INQ56_RS06840	COG0436	Aminotransferase
INQ56_RS06845	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
INQ56_RS06855	COG1714	RDD family
INQ56_RS06865	COG0835	chemotaxis
INQ56_RS06865	COG0784	Response regulator, receiver
INQ56_RS06890	COG2814	Major facilitator Superfamily
INQ56_RS06895	COG1376	ErfK ybiS ycfS ynhG family protein
INQ56_RS06900	COG1408	metallophosphoesterase
INQ56_RS06905	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS06910	COG2200	EAL domain
INQ56_RS06915	COG3546	catalase activity
INQ56_RS06920	COG4703	Protein of unknown function (DUF1797)
INQ56_RS06925	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
INQ56_RS06935	COG0517	IMP dehydrogenase activity
INQ56_RS06940	COG0583	DNA-binding transcription factor activity
INQ56_RS06950	COG0716	FMN binding
INQ56_RS06960	COG0716	FMN binding
INQ56_RS06965	COG2171	N-acyltransferase activity
INQ56_RS06970	COG1473	amidohydrolase
INQ56_RS06980	COG0668	transmembrane transport
INQ56_RS06985	COG0450	alkyl hydroperoxide reductase
INQ56_RS06990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS07005	COG0746	molybdenum cofactor guanylyltransferase activity
INQ56_RS07010	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
INQ56_RS07015	COG0303	'Molybdopterin
INQ56_RS07020	COG1763	Mo-molybdopterin cofactor biosynthetic process
INQ56_RS07025	COG0314	molybdopterin synthase activity
INQ56_RS07030	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
INQ56_RS07045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
INQ56_RS07050	COG1136	(ABC) transporter
INQ56_RS07055	COG0577	efflux transmembrane transporter activity
INQ56_RS07060	COG1349	DNA-binding transcription factor activity
INQ56_RS07065	COG1105	Belongs to the carbohydrate kinase PfkB family
INQ56_RS07070	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS07070	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS07070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS07075	COG0681	Belongs to the peptidase S26 family
INQ56_RS07085	COG0488	(ABC) transporter
INQ56_RS07090	COG2309	aminopeptidase activity
INQ56_RS07100	COG1077	Cell shape determining protein MreB Mrl
INQ56_RS07105	COG2002	toxin-antitoxin pair type II binding
INQ56_RS07110	COG3852	Histidine kinase
INQ56_RS07115	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
INQ56_RS07115	COG2105	PFAM AIG2 family protein
INQ56_RS07120	COG0569	domain protein
INQ56_RS07125	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
INQ56_RS07130	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
INQ56_RS07135	COG5503	Protein of unknown function (DUF1447)
INQ56_RS07140	COG0561	phosphatase activity
INQ56_RS07145	COG0242	peptide deformylase activity
INQ56_RS07160	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
INQ56_RS07165	COG0022	dehydrogenase e1 component
INQ56_RS07170	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS07175	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
INQ56_RS07180	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS07190	COG1982	Orn Lys Arg decarboxylase major
INQ56_RS07195	COG4476	Belongs to the UPF0223 family
INQ56_RS07200	COG4493	Belongs to the UPF0637 family
INQ56_RS07210	COG0483	inositol monophosphate 1-phosphatase activity
INQ56_RS07225	COG1595	DNA-templated transcription, initiation
INQ56_RS07245	COG1217	gtp-binding protein TYPA
INQ56_RS07255	COG4896	Protein conserved in bacteria
INQ56_RS07265	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
INQ56_RS07270	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
INQ56_RS07275	COG2066	Belongs to the glutaminase family
INQ56_RS07280	COG4838	Belongs to the UPF0358 family
INQ56_RS07285	COG0772	Belongs to the SEDS family
INQ56_RS07290	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
INQ56_RS07295	COG0415	Belongs to the DNA photolyase family
INQ56_RS07300	COG1612	heme a metabolic process
INQ56_RS07305	COG0109	protoheme IX farnesyltransferase activity
INQ56_RS07310	COG2010	Cytochrome c
INQ56_RS07310	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
INQ56_RS07315	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
INQ56_RS07320	COG1845	cytochrome c oxidase, subunit III
INQ56_RS07325	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
INQ56_RS07330	COG3336	cytochrome c oxidase
INQ56_RS07340	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
INQ56_RS07345	COG2340	Cysteine-rich secretory protein family
INQ56_RS07365	COG3679	Belongs to the UPF0342 family
INQ56_RS07370	COG4471	UPF0298 protein
INQ56_RS07375	COG0742	ribosomal rna small subunit methyltransferase
INQ56_RS07380	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
INQ56_RS07385	COG3314	Sporulation integral membrane protein YlbJ
INQ56_RS07390	COG1752	Esterase of the alpha-beta hydrolase superfamily
INQ56_RS07395	COG3480	Lon protease (S16) C-terminal proteolytic domain
INQ56_RS07405	COG1399	metal-binding, possibly nucleic acid-binding protein
INQ56_RS07410	COG0333	Belongs to the bacterial ribosomal protein bL32 family
INQ56_RS07420	COG0454	-acetyltransferase
INQ56_RS07425	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
INQ56_RS07430	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
INQ56_RS07435	COG2001	Belongs to the MraZ family
INQ56_RS07440	COG0275	rRNA processing
INQ56_RS07445	COG4839	cell division protein FtsL
INQ56_RS07450	COG0768	penicillin binding
INQ56_RS07455	COG0768	penicillin binding
INQ56_RS07460	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
INQ56_RS07465	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
INQ56_RS07470	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
INQ56_RS07475	COG0772	Belongs to the SEDS family
INQ56_RS07480	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
INQ56_RS07485	COG0812	UDP-N-acetylmuramate dehydrogenase activity
INQ56_RS07490	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
INQ56_RS07495	COG3879	Bacterial protein of unknown function (DUF881)
INQ56_RS07500	COG3879	Bacterial protein of unknown function (DUF881)
INQ56_RS07505	COG3856	small basic protein
INQ56_RS07510	COG0849	cell division
INQ56_RS07515	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
INQ56_RS07520	COG1404	Belongs to the peptidase S8 family
INQ56_RS07520	COG4412	M6 family metalloprotease domain protein
INQ56_RS07530	COG1191	sigma factor activity
INQ56_RS07535	COG1191	sigma factor activity
INQ56_RS07540	COG2390	Transcriptional regulator
INQ56_RS07555	COG3730	PTS system glucitol sorbitol-specific
INQ56_RS07560	COG3732	PTS system glucitol sorbitol-specific
INQ56_RS07570	COG1119	ATPase activity
INQ56_RS07575	COG1873	PFAM PRC-barrel domain
INQ56_RS07580	COG1496	oxidoreductase activity
INQ56_RS07585	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
INQ56_RS07590	COG1799	cell septum assembly
INQ56_RS07595	COG0762	integral membrane protein
INQ56_RS07600	COG2302	S4 RNA-binding domain
INQ56_RS07605	COG3599	regulation of cell shape
INQ56_RS07610	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
INQ56_RS07615	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
INQ56_RS07620	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
INQ56_RS07625	COG0564	pseudouridine synthase activity
INQ56_RS07630	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
INQ56_RS07635	COG2233	PERMEase
INQ56_RS07640	COG0540	Belongs to the ATCase OTCase family
INQ56_RS07645	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
INQ56_RS07650	COG0505	Belongs to the CarA family
INQ56_RS07655	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
INQ56_RS07660	COG0543	2 iron, 2 sulfur cluster binding
INQ56_RS07665	COG0167	dihydroorotate dehydrogenase activity
INQ56_RS07670	COG0284	orotidine-5'-phosphate decarboxylase activity
INQ56_RS07675	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
INQ56_RS07685	COG0175	sulfate reduction
INQ56_RS07690	COG0306	phosphate transporter
INQ56_RS07695	COG2046	Belongs to the sulfate adenylyltransferase family
INQ56_RS07700	COG0529	Catalyzes the synthesis of activated sulfate
INQ56_RS07705	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
INQ56_RS07710	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
INQ56_RS07715	COG1648	precorrin-2 dehydrogenase activity
INQ56_RS07725	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
INQ56_RS07730	COG1561	YicC-like family, N-terminal region
INQ56_RS07735	COG2052	Domain of unknown function (DUF370)
INQ56_RS07740	COG0194	GDP metabolic process
INQ56_RS07745	COG1758	RNA polymerase activity
INQ56_RS07750	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
INQ56_RS07755	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
INQ56_RS07760	COG0242	peptide deformylase activity
INQ56_RS07765	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
INQ56_RS07770	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
INQ56_RS07770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
INQ56_RS07775	COG0820	rRNA (adenine-C2-)-methyltransferase activity
INQ56_RS07780	COG0631	protein serine/threonine phosphatase activity
INQ56_RS07785	COG2815	serine threonine protein kinase
INQ56_RS07785	COG0515	serine threonine protein kinase
INQ56_RS07790	COG1162	GTPase activity
INQ56_RS07795	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
INQ56_RS07800	COG1564	THIamine pyrophosphokinase
INQ56_RS07810	COG0227	Belongs to the bacterial ribosomal protein bL28 family
INQ56_RS07815	COG1302	Protein conserved in bacteria
INQ56_RS07820	COG1461	Dihydroxyacetone kinase
INQ56_RS07825	COG1760	l-serine dehydratase
INQ56_RS07830	COG1760	l-serine dehydratase
INQ56_RS07835	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
INQ56_RS07840	COG1349	DNA-binding transcription factor activity
INQ56_RS07845	COG0416	fatty acid biosynthetic process
INQ56_RS07850	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
INQ56_RS07855	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS07860	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
INQ56_RS07870	COG1196	nuclear chromosome segregation
INQ56_RS07875	COG0552	protein localization to endoplasmic reticulum
INQ56_RS07880	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
INQ56_RS07885	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
INQ56_RS07890	COG0228	four-way junction DNA binding
INQ56_RS07895	COG1837	Belongs to the UPF0109 family
INQ56_RS07905	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
INQ56_RS07910	COG0336	Belongs to the RNA methyltransferase TrmD family
INQ56_RS07915	COG0335	large ribosomal subunit rRNA binding
INQ56_RS07920	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
INQ56_RS07925	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
INQ56_RS07935	COG2257	FlhB HrpN YscU SpaS Family
INQ56_RS07940	COG0045	succinate-CoA ligase (ADP-forming) activity
INQ56_RS07945	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
INQ56_RS07950	COG0758	DNA mediated transformation
INQ56_RS07955	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
INQ56_RS07960	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
INQ56_RS07965	COG4974	Belongs to the 'phage' integrase family
INQ56_RS07970	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
INQ56_RS07975	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
INQ56_RS07980	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
INQ56_RS07985	COG1815	bacterial-type flagellum-dependent cell motility
INQ56_RS07990	COG1558	bacterial-type flagellum-dependent cell motility
INQ56_RS07995	COG1677	Flagellar hook-basal body complex protein FliE
INQ56_RS08000	COG1766	The M ring may be actively involved in energy transduction
INQ56_RS08005	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
INQ56_RS08010	COG1317	bacterial-type flagellum organization
INQ56_RS08015	COG1157	protein secretion by the type III secretion system
INQ56_RS08020	COG2882	bacterial-type flagellum organization
INQ56_RS08025	COG3334	PFAM MgtE intracellular
INQ56_RS08030	COG3144	bacterial-type flagellum assembly
INQ56_RS08035	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
INQ56_RS08040	COG4786	Flagellar basal body rod
INQ56_RS08045	COG1582	Flagellar protein (FlbD)
INQ56_RS08050	COG1580	Controls the rotational direction of flagella during chemotaxis
INQ56_RS08055	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
INQ56_RS08060	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
INQ56_RS08060	COG1776	CheC inhibitor of MCP methylation
INQ56_RS08065	COG2201	protein-glutamate methylesterase activity
INQ56_RS08070	COG3190	flagellar
INQ56_RS08075	COG1338	Plays a role in the flagellum-specific transport system
INQ56_RS08080	COG1987	bacterial-type flagellum assembly
INQ56_RS08085	COG1684	flagellar biosynthetic protein fliR
INQ56_RS08090	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
INQ56_RS08095	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
INQ56_RS08100	COG1419	protein localization to endoplasmic reticulum
INQ56_RS08105	COG0455	bacterial-type flagellum organization
INQ56_RS08110	COG2201	protein-glutamate methylesterase activity
INQ56_RS08115	COG0643	Histidine kinase
INQ56_RS08115	COG2198	Histidine kinase
INQ56_RS08120	COG0835	chemotaxis
INQ56_RS08125	COG1776	CheC inhibitor of MCP methylation
INQ56_RS08130	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
INQ56_RS08135	COG1191	sigma factor activity
INQ56_RS08150	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
INQ56_RS08155	COG0528	UMP kinase activity
INQ56_RS08160	COG0233	cytoplasmic translational termination
INQ56_RS08165	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
INQ56_RS08170	COG4589	Belongs to the CDS family
INQ56_RS08175	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
INQ56_RS08180	COG0750	zinc metalloprotease
INQ56_RS08185	COG0442	prolyl-tRNA aminoacylation
INQ56_RS08190	COG2176	DNA-directed DNA polymerase activity
INQ56_RS08205	COG3693	PFAM glycoside hydrolase, family 10
INQ56_RS08215	COG0779	Required for maturation of 30S ribosomal subunits
INQ56_RS08220	COG0195	Participates in both transcription termination and antitermination
INQ56_RS08225	COG2740	Nucleic-acid-binding protein implicated in transcription termination
INQ56_RS08230	COG1358	cellular component organization or biogenesis
INQ56_RS08235	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
INQ56_RS08240	COG1550	Protein conserved in bacteria
INQ56_RS08245	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
INQ56_RS08250	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
INQ56_RS08255	COG0196	riboflavin kinase activity
INQ56_RS08260	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
INQ56_RS08265	COG1185	polyribonucleotide nucleotidyltransferase activity
INQ56_RS08270	COG0726	polysaccharide deacetylase
INQ56_RS08275	COG0612	Peptidase, M16
INQ56_RS08285	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
INQ56_RS08295	COG1132	(ABC) transporter
INQ56_RS08300	COG1132	(ABC) transporter
INQ56_RS08335	COG1812	S-adenosylmethionine synthetase (AdoMet synthetase)
INQ56_RS08355	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS08360	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS08365	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
INQ56_RS08370	COG1260	myo-inositol-1-phosphate synthase
INQ56_RS08415	COG0367	asparagine synthase
INQ56_RS08420	COG1873	PFAM PRC-barrel domain
INQ56_RS08425	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
INQ56_RS08430	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
INQ56_RS08435	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
INQ56_RS08440	COG0527	aspartate kinase activity
INQ56_RS08450	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
INQ56_RS08455	COG0740	serine-type endopeptidase activity
INQ56_RS08465	COG4980	gas vesicle protein
INQ56_RS08465	COG1674	ftsk spoiiie
INQ56_RS08470	COG2188	Transcriptional regulator
INQ56_RS08475	COG2814	Major facilitator Superfamily
INQ56_RS08480	COG2409	Drug exporters of the RND superfamily
INQ56_RS08480	COG1033	growth of symbiont in host cell
INQ56_RS08485	COG0612	Peptidase, M16
INQ56_RS08490	COG0612	Peptidase, M16
INQ56_RS08500	COG2409	Drug exporters of the RND superfamily
INQ56_RS08500	COG1033	growth of symbiont in host cell
INQ56_RS08505	COG0300	oxidoreductase activity
INQ56_RS08520	COG1426	Protein conserved in bacteria
INQ56_RS08525	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
INQ56_RS08530	COG1058	Belongs to the CinA family
INQ56_RS08530	COG1546	Belongs to the CinA family
INQ56_RS08535	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
INQ56_RS08540	COG1418	mRNA catabolic process
INQ56_RS08545	COG1692	metallophosphoesterase
INQ56_RS08550	COG2359	stage V sporulation protein S
INQ56_RS08555	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
INQ56_RS08560	COG1063	alcohol dehydrogenase
INQ56_RS08565	COG0156	8-amino-7-oxononanoate synthase activity
INQ56_RS08575	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
INQ56_RS08580	COG4550	Control of competence regulator ComK, YlbF/YmcA
INQ56_RS08590	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
INQ56_RS08595	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
INQ56_RS08620	COG1329	Transcriptional regulator
INQ56_RS08625	COG4195	phage-related replication protein
INQ56_RS08630	COG0457	Tetratricopeptide repeat
INQ56_RS08635	COG1404	Belongs to the peptidase S8 family
INQ56_RS08640	COG4195	phage-related replication protein
INQ56_RS08645	COG1764	response to oxidative stress
INQ56_RS08650	COG2076	Multidrug Resistance protein
INQ56_RS08675	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
INQ56_RS08680	COG1923	regulation of RNA biosynthetic process
INQ56_RS08695	COG1780	Probably involved in ribonucleotide reductase function
INQ56_RS08700	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
INQ56_RS08705	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
INQ56_RS08710	COG4112	unkown
INQ56_RS08720	COG0464	growth
INQ56_RS08725	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
INQ56_RS08730	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
INQ56_RS08735	COG0789	Transcriptional regulator
INQ56_RS08740	COG0174	glutamine synthetase
INQ56_RS08750	COG5444	nuclease activity
INQ56_RS08790	COG0494	nUDIX hydrolase
INQ56_RS08820	COG0457	Tetratricopeptide repeat
INQ56_RS08830	COG5444	nuclease activity
INQ56_RS08855	COG5646	InterPro IPR014922
INQ56_RS08875	COG0457	Tetratricopeptide repeat
INQ56_RS08885	COG3619	membrane
INQ56_RS08890	COG3285	dna ligase
INQ56_RS08890	COG1793	dna ligase
INQ56_RS08895	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
INQ56_RS08900	COG4876	unkown
INQ56_RS08910	COG1959	2 iron, 2 sulfur cluster binding
INQ56_RS08915	COG0702	epimerase
INQ56_RS08920	COG0247	lactate metabolic process
INQ56_RS08925	COG1139	Iron-sulfur cluster binding protein
INQ56_RS08930	COG1556	Lactate utilization protein
INQ56_RS08950	COG2323	membrane
INQ56_RS08955	COG1309	transcriptional regulator
INQ56_RS08960	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
INQ56_RS08960	COG2124	cytochrome p450
INQ56_RS08965	COG3591	Belongs to the peptidase S1B family
INQ56_RS08970	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
INQ56_RS08975	COG3209	COG3209 Rhs family protein
INQ56_RS08980	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS08995	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
INQ56_RS09000	COG1388	LysM domain
INQ56_RS09005	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
INQ56_RS09010	COG4224	UPF0291 protein
INQ56_RS09015	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
INQ56_RS09025	COG3763	UPF0154 protein
INQ56_RS09035	COG0785	Cytochrome C biogenesis protein
INQ56_RS09040	COG4846	Membrane protein involved in cytochrome C biogenesis
INQ56_RS09050	COG0071	Belongs to the small heat shock protein (HSP20) family
INQ56_RS09065	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
INQ56_RS09070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS09090	COG0824	Thioesterase
INQ56_RS09100	COG4841	protein insertion into membrane
INQ56_RS09105	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
INQ56_RS09110	COG1832	CoA-binding protein
INQ56_RS09115	COG0187	DNA topoisomerase II activity
INQ56_RS09120	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
INQ56_RS09130	COG0738	Major facilitator superfamily
INQ56_RS09135	COG0473	3-isopropylmalate dehydrogenase activity
INQ56_RS09145	COG2249	NAD(P)H dehydrogenase (quinone) activity
INQ56_RS09150	COG1733	regulation of RNA biosynthetic process
INQ56_RS09165	COG0569	domain protein
INQ56_RS09170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
INQ56_RS09175	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
INQ56_RS09180	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
INQ56_RS09195	COG5609	conserved protein (DUF2294)
INQ56_RS09200	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
INQ56_RS09205	COG0251	oxidation-reduction process
INQ56_RS09245	COG0657	acetylesterase activity
INQ56_RS09260	COG2205	protein histidine kinase activity
INQ56_RS09265	COG0745	RESPONSE REGULATOR receiver
INQ56_RS09275	COG3507	Belongs to the glycosyl hydrolase 43 family
INQ56_RS09280	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS09285	COG1486	melibiose metabolic process
INQ56_RS09290	COG0395	ABC-type sugar transport system, permease component
INQ56_RS09295	COG1175	transmembrane transport
INQ56_RS09300	COG1653	transport
INQ56_RS09305	COG1609	Transcriptional regulator
INQ56_RS09310	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
INQ56_RS09325	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS09330	COG0456	acetyltransferase
INQ56_RS09335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS09350	COG5444	nuclease activity
INQ56_RS09355	COG1846	Transcriptional regulator
INQ56_RS09360	COG2814	Major facilitator Superfamily
INQ56_RS09370	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS09370	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS09370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS09375	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS09375	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
INQ56_RS09375	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS09380	COG1105	Belongs to the carbohydrate kinase PfkB family
INQ56_RS09390	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INQ56_RS09415	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
INQ56_RS09420	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
INQ56_RS09425	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
INQ56_RS09430	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
INQ56_RS09435	COG1024	Enoyl-CoA hydratase
INQ56_RS09440	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
INQ56_RS09445	COG0511	ligase activity, forming carbon-carbon bonds
INQ56_RS09450	COG0439	Biotin carboxylase
INQ56_RS09455	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS09460	COG1960	acyl-CoA dehydrogenase activity
INQ56_RS09465	COG1649	PFAM Uncharacterised BCR, COG1649
INQ56_RS09470	COG2365	Tyrosine phosphatase family
INQ56_RS09475	COG1349	DNA-binding transcription factor activity
INQ56_RS09480	COG1942	4-Oxalocrotonate Tautomerase
INQ56_RS09490	COG3835	regulator
INQ56_RS09495	COG0277	FAD linked oxidase domain protein
INQ56_RS09500	COG0247	lactate metabolic process
INQ56_RS09520	COG0166	Belongs to the GPI family
INQ56_RS09525	COG2246	polysaccharide biosynthetic process
INQ56_RS09530	COG1210	Utp--glucose-1-phosphate uridylyltransferase
INQ56_RS09535	COG0586	Pfam SNARE associated Golgi protein
INQ56_RS09540	COG1587	Uroporphyrinogen-III synthase
INQ56_RS09550	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS09570	COG0534	Mate efflux family protein
INQ56_RS09575	COG2027	D-alanyl-D-alanine carboxypeptidase
INQ56_RS09580	COG4677	pectinesterase activity
INQ56_RS09585	COG2323	membrane
INQ56_RS09590	COG0493	'glutamate synthase
INQ56_RS09595	COG0067	glutamate synthase
INQ56_RS09595	COG0069	glutamate synthase activity
INQ56_RS09595	COG0070	glutamate synthase
INQ56_RS09600	COG0583	DNA-binding transcription factor activity
INQ56_RS09610	COG1132	(ABC) transporter
INQ56_RS09615	COG0789	Transcriptional regulator
INQ56_RS09615	COG4978	Transcriptional regulator
INQ56_RS09620	COG0454	-acetyltransferase
INQ56_RS09625	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
INQ56_RS09630	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
INQ56_RS09635	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
INQ56_RS09645	COG0243	molybdopterin cofactor binding
INQ56_RS09655	COG1070	Carbohydrate kinase
INQ56_RS09660	COG2115	Belongs to the xylose isomerase family
INQ56_RS09665	COG1940	carbohydrate kinase activity
INQ56_RS09675	COG2211	Major facilitator Superfamily
INQ56_RS09680	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INQ56_RS09685	COG1994	Peptidase M50
INQ56_RS09705	COG1309	transcriptional regulator
INQ56_RS09710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS09715	COG3708	Transcriptional regulator
INQ56_RS09720	COG2378	regulation of single-species biofilm formation
INQ56_RS09730	COG0640	Transcriptional regulator
INQ56_RS09735	COG0531	amino acid
INQ56_RS09740	COG0741	lytic transglycosylase activity
INQ56_RS09745	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
INQ56_RS09750	COG2079	MmgE PrpD family protein
INQ56_RS09755	COG0372	Belongs to the citrate synthase family
INQ56_RS09760	COG2322	membrane
INQ56_RS09770	COG3584	3D domain protein
INQ56_RS09770	COG1388	LysM domain
INQ56_RS09775	COG0514	ATP-dependent DNA helicase (RecQ)
INQ56_RS09785	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
INQ56_RS09810	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS09820	COG1657	PFAM Prenyltransferase squalene oxidase
INQ56_RS09825	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
INQ56_RS09830	COG0385	Bile acid
INQ56_RS09835	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS09840	COG0567	Dehydrogenase, E1 component
INQ56_RS09845	COG4548	von Willebrand factor, type A
INQ56_RS09850	COG0714	Associated with various cellular activities
INQ56_RS09855	COG2032	superoxide dismutase activity
INQ56_RS09860	COG1388	LysM domain
INQ56_RS09860	COG0791	NLP P60 protein
INQ56_RS09865	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
INQ56_RS09870	COG0534	Mate efflux family protein
INQ56_RS09875	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
INQ56_RS09880	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
INQ56_RS09890	COG2962	Rard protein
INQ56_RS09905	COG1733	regulation of RNA biosynthetic process
INQ56_RS09910	COG0778	Nitroreductase
INQ56_RS09920	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
INQ56_RS09925	COG3409	Peptidoglycan-binding domain 1 protein
INQ56_RS09925	COG0793	Belongs to the peptidase S41A family
INQ56_RS09930	COG2226	methyltransferase
INQ56_RS09940	COG1876	peptidase activity
INQ56_RS09945	COG0813	purine-nucleoside phosphorylase activity
INQ56_RS09955	COG0671	phosphoesterase, PA-phosphatase related
INQ56_RS09975	COG4479	Belongs to the UPF0346 family
INQ56_RS09985	COG1509	lysine 2,3-aminomutase activity
INQ56_RS09990	COG3829	transcription factor binding
INQ56_RS09995	COG0463	Glycosyl transferase, family 2
INQ56_RS10010	COG4641	Protein conserved in bacteria
INQ56_RS10020	COG1086	Polysaccharide biosynthesis protein
INQ56_RS10025	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
INQ56_RS10030	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
INQ56_RS10035	COG1846	Transcriptional regulator
INQ56_RS10055	COG4698	Protein conserved in bacteria
INQ56_RS10060	COG2755	lipolytic protein G-D-S-L family
INQ56_RS10065	COG1999	signal sequence binding
INQ56_RS10080	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
INQ56_RS10085	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
INQ56_RS10090	COG1272	protein, Hemolysin III
INQ56_RS10095	COG0204	Acyl-transferase
INQ56_RS10100	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
INQ56_RS10105	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
INQ56_RS10110	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
INQ56_RS10120	COG2521	methyltransferase
INQ56_RS10120	COG2136	Putative SAM-dependent methyltransferase
INQ56_RS10130	COG0129	dihydroxy-acid dehydratase activity
INQ56_RS10135	COG1413	lyase activity
INQ56_RS10140	COG1418	mRNA catabolic process
INQ56_RS10145	COG0386	Belongs to the glutathione peroxidase family
INQ56_RS10150	COG2759	Belongs to the formate--tetrahydrofolate ligase family
INQ56_RS10155	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
INQ56_RS10160	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
INQ56_RS10170	COG1278	Cold shock
INQ56_RS10185	COG0328	RNA-DNA hybrid ribonuclease activity
INQ56_RS10190	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
INQ56_RS10195	COG0328	RNA-DNA hybrid ribonuclease activity
INQ56_RS10205	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
INQ56_RS10215	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
INQ56_RS10225	COG1755	Isoprenylcysteine carboxyl methyltransferase
INQ56_RS10230	COG3424	synthase
INQ56_RS10235	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
INQ56_RS10240	COG0726	polysaccharide deacetylase
INQ56_RS10245	COG2233	PERMEase
INQ56_RS10250	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
INQ56_RS10255	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
INQ56_RS10260	COG1199	ATP-dependent helicase activity
INQ56_RS10270	COG0116	Belongs to the methyltransferase superfamily
INQ56_RS10280	COG3599	regulation of cell shape
INQ56_RS10285	COG4474	Belongs to the UPF0398 family
INQ56_RS10295	COG3359	exonuclease
INQ56_RS10300	COG1111	helicase
INQ56_RS10300	COG1205	dead DEAH box helicase
INQ56_RS10305	COG1902	pentaerythritol trinitrate reductase activity
INQ56_RS10310	COG2190	(PTS) system
INQ56_RS10315	COG0071	Belongs to the small heat shock protein (HSP20) family
INQ56_RS10345	COG3331	DNA recombination
INQ56_RS10350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
INQ56_RS10350	COG4499	WXG100 protein secretion system (Wss), protein YukC
INQ56_RS10360	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
INQ56_RS10365	COG3935	DnaD domain protein
INQ56_RS10370	COG0017	Asparaginyl-tRNA synthetase
INQ56_RS10375	COG5353	protein conserved in bacteria
INQ56_RS10385	COG1199	ATP-dependent helicase activity
INQ56_RS10385	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
INQ56_RS10390	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
INQ56_RS10395	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
INQ56_RS10400	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
INQ56_RS10410	COG0617	tRNA 3'-terminal CCA addition
INQ56_RS10415	COG0438	transferase activity, transferring glycosyl groups
INQ56_RS10420	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
INQ56_RS10425	COG1803	Methylglyoxal synthase
INQ56_RS10430	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
INQ56_RS10435	COG1694	Mazg nucleotide pyrophosphohydrolase
INQ56_RS10440	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
INQ56_RS10450	COG4347	Protein of unknown function (DUF1405)
INQ56_RS10455	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
INQ56_RS10455	COG2010	Cytochrome c
INQ56_RS10460	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
INQ56_RS10465	COG0723	plastoquinol--plastocyanin reductase activity
INQ56_RS10475	COG5582	Belongs to the UPF0302 family
INQ56_RS10480	COG0457	Tetratricopeptide repeat
INQ56_RS10485	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
INQ56_RS10490	COG0287	Prephenate dehydrogenase
INQ56_RS10495	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
INQ56_RS10500	COG0159	tryptophan synthase activity
INQ56_RS10505	COG0133	tryptophan synthase activity
INQ56_RS10515	COG0134	indole-3-glycerol-phosphate synthase activity
INQ56_RS10520	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
INQ56_RS10530	COG4401	Chorismate mutase type I
INQ56_RS10535	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
INQ56_RS10540	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
INQ56_RS10545	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
INQ56_RS10550	COG0105	UTP biosynthetic process
INQ56_RS10555	COG0142	geranyltranstransferase activity
INQ56_RS10560	COG2226	methyltransferase
INQ56_RS10565	COG0142	geranyltranstransferase activity
INQ56_RS10575	COG0302	gtp cyclohydrolase
INQ56_RS10580	COG0776	regulation of translation
INQ56_RS10585	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
INQ56_RS10600	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
INQ56_RS10605	COG1160	GTP binding
INQ56_RS10630	COG1304	FMN binding
INQ56_RS10635	COG0539	negative regulation of cytoplasmic translation
INQ56_RS10640	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
INQ56_RS10650	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
INQ56_RS10655	COG2959	enzyme of heme biosynthesis
INQ56_RS10660	COG3773	Cell wall hydrolase
INQ56_RS10660	COG3409	Peptidoglycan-binding domain 1 protein
INQ56_RS10665	COG2339	peptidase activity
INQ56_RS10670	COG0492	ferredoxin-NADP+ reductase activity
INQ56_RS10675	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
INQ56_RS10680	COG4862	establishment of competence for transformation
INQ56_RS10685	COG1408	metallophosphoesterase
INQ56_RS10695	COG1388	LysM domain
INQ56_RS10700	COG1266	CAAX protease self-immunity
INQ56_RS10705	COG0514	ATP-dependent DNA helicase (RecQ)
INQ56_RS10710	COG4955	Helix-turn-helix domain
INQ56_RS10715	COG1141	Ferredoxin
INQ56_RS10720	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
INQ56_RS10725	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
INQ56_RS10740	COG1595	DNA-templated transcription, initiation
INQ56_RS10745	COG5002	protein histidine kinase activity
INQ56_RS10750	COG0745	RESPONSE REGULATOR receiver
INQ56_RS10755	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
INQ56_RS10760	COG1333	cytochrome c biogenesis protein
INQ56_RS10765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS10770	COG1187	pseudouridine synthase activity
INQ56_RS10775	COG0700	Nucleoside recognition
INQ56_RS10780	COG2715	membrane protein required for spore maturation
INQ56_RS10785	COG1686	Belongs to the peptidase S11 family
INQ56_RS10795	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
INQ56_RS10800	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
INQ56_RS10810	COG1547	Domain of unknown function (DUF309)
INQ56_RS10815	COG0456	acetyltransferase
INQ56_RS10820	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
INQ56_RS10825	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS10825	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS10830	COG0307	riboflavin synthase, alpha
INQ56_RS10850	COG2814	Major facilitator Superfamily
INQ56_RS10855	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
INQ56_RS10860	COG4086	secreted protein
INQ56_RS10865	COG0019	diaminopimelate decarboxylase activity
INQ56_RS10870	COG0697	spore germination
INQ56_RS10885	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
INQ56_RS10905	COG1191	sigma factor activity
INQ56_RS10910	COG2172	sigma factor antagonist activity
INQ56_RS10920	COG1686	Belongs to the peptidase S11 family
INQ56_RS10925	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
INQ56_RS10930	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
INQ56_RS10935	COG4974	Belongs to the 'phage' integrase family
INQ56_RS10945	COG0735	belongs to the Fur family
INQ56_RS10950	COG1300	Membrane
INQ56_RS10955	COG1404	Belongs to the peptidase S8 family
INQ56_RS10965	COG2153	protein acetylation
INQ56_RS10970	COG1379	DNA repair
INQ56_RS10975	COG0494	nUDIX hydrolase
INQ56_RS10980	COG0667	Aldo Keto reductase
INQ56_RS10990	COG1073	alpha beta
INQ56_RS10995	COG0457	Tetratricopeptide repeat
INQ56_RS11005	COG4918	Iron-sulphur cluster biosynthesis
INQ56_RS11010	COG4305	rare lipoprotein A
INQ56_RS11015	COG0456	acetyltransferase
INQ56_RS11015	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
INQ56_RS11020	COG0456	acetyltransferase
INQ56_RS11030	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
INQ56_RS11040	COG2211	Major facilitator Superfamily
INQ56_RS11045	COG1072	(Pantothenic acid kinase))
INQ56_RS11050	COG0446	pyridine nucleotide-disulphide oxidoreductase
INQ56_RS11060	COG0300	oxidoreductase activity
INQ56_RS11065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS11070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
INQ56_RS11090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
INQ56_RS11095	COG4187	Peptidase family M20/M25/M40
INQ56_RS11100	COG1902	pentaerythritol trinitrate reductase activity
INQ56_RS11105	COG0596	Alpha beta hydrolase
INQ56_RS11110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
INQ56_RS11120	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
INQ56_RS11125	COG2188	Transcriptional regulator
INQ56_RS11130	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS11135	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS11140	COG1447	Phosphotransferase system cellobiose-specific component IIA
INQ56_RS11145	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS11155	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS11165	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
INQ56_RS11170	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
INQ56_RS11180	COG0706	membrane insertase activity
INQ56_RS11185	COG0835	chemotaxis
INQ56_RS11190	COG2195	Cleaves the N-terminal amino acid of tripeptides
INQ56_RS11195	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
INQ56_RS11200	COG0346	lactoylglutathione lyase activity
INQ56_RS11210	COG1376	ErfK ybiS ycfS ynhG family protein
INQ56_RS11215	COG4129	membrane
INQ56_RS11220	COG1126	abc transporter atp-binding protein
INQ56_RS11225	COG0765	amino acid transport
INQ56_RS11230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS11240	COG1597	lipid kinase activity
INQ56_RS11250	COG0508	dehydrogenase complex catalyzes the overall conversion of
INQ56_RS11255	COG0022	dehydrogenase e1 component
INQ56_RS11260	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
INQ56_RS11265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
INQ56_RS11270	COG3426	butyrate kinase activity
INQ56_RS11275	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
INQ56_RS11280	COG0280	phosphate acetyltransferase
INQ56_RS11285	COG3290	protein histidine kinase activity
INQ56_RS11285	COG3829	transcription factor binding
INQ56_RS11295	COG0584	glycerophosphoryl diester phosphodiesterase
INQ56_RS11300	COG0457	Tetratricopeptide repeat
INQ56_RS11305	COG0745	RESPONSE REGULATOR receiver
INQ56_RS11310	COG0750	zinc metalloprotease
INQ56_RS11315	COG0497	DNA recombination
INQ56_RS11320	COG1438	arginine binding
INQ56_RS11325	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
INQ56_RS11330	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
INQ56_RS11335	COG0142	geranyltranstransferase activity
INQ56_RS11340	COG1722	exodeoxyribonuclease VII activity
INQ56_RS11345	COG1570	exodeoxyribonuclease VII activity
INQ56_RS11350	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
INQ56_RS11355	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
INQ56_RS11360	COG1302	Protein conserved in bacteria
INQ56_RS11365	COG0439	Biotin carboxylase
INQ56_RS11370	COG0511	ligase activity, forming carbon-carbon bonds
INQ56_RS11410	COG3854	ATPases associated with a variety of cellular activities
INQ56_RS11420	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
INQ56_RS11425	COG0006	proline dipeptidase activity
INQ56_RS11430	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
INQ56_RS11440	COG3872	metal-dependent enzyme
INQ56_RS11450	COG1752	Esterase of the alpha-beta hydrolase superfamily
INQ56_RS11455	COG1321	iron dependent repressor
INQ56_RS11460	COG0095	Lipoate-protein ligase
INQ56_RS11465	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
INQ56_RS11470	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
INQ56_RS11475	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
INQ56_RS11480	COG0404	The glycine cleavage system catalyzes the degradation of glycine
INQ56_RS11485	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
INQ56_RS11510	COG0681	Belongs to the peptidase S26 family
INQ56_RS11540	COG4970	Tfp pilus assembly protein FimT
INQ56_RS11545	COG4537	Required for transformation and DNA binding
INQ56_RS11550	COG1459	type II secretion system
INQ56_RS11555	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
INQ56_RS11560	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS11570	COG1393	Belongs to the ArsC family
INQ56_RS11580	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS11590	COG0011	TIGRFAM Protein of
INQ56_RS11595	COG2814	Major facilitator Superfamily
INQ56_RS11600	COG2866	Carboxypeptidase
INQ56_RS11605	COG1368	sulfuric ester hydrolase activity
INQ56_RS11610	COG1940	carbohydrate kinase activity
INQ56_RS11615	COG4483	Protein conserved in bacteria
INQ56_RS11620	COG0457	Tetratricopeptide repeat
INQ56_RS11620	COG0705	Rhomboid family
INQ56_RS11635	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
INQ56_RS11640	COG0267	Belongs to the bacterial ribosomal protein bL33 family
INQ56_RS11650	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
INQ56_RS11655	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
INQ56_RS11660	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
INQ56_RS11665	COG0581	inorganic phosphate transmembrane transporter activity
INQ56_RS11670	COG0573	inorganic phosphate transmembrane transporter activity
INQ56_RS11675	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
INQ56_RS11680	COG0768	penicillin binding
INQ56_RS11685	COG0477	Major facilitator Superfamily
INQ56_RS11690	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
INQ56_RS11695	COG2839	Protein conserved in bacteria
INQ56_RS11700	COG5521	maltodextrose utilization protein MalA
INQ56_RS11705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
INQ56_RS11710	COG1388	LysM domain
INQ56_RS11715	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
INQ56_RS11720	COG4709	membrane
INQ56_RS11725	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
INQ56_RS11730	COG1940	carbohydrate kinase activity
INQ56_RS11735	COG0735	belongs to the Fur family
INQ56_RS11740	COG1108	ABC-type Mn2 Zn2 transport systems permease components
INQ56_RS11745	COG1121	(ABC) transporter
INQ56_RS11750	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
INQ56_RS11765	COG0513	Belongs to the DEAD box helicase family
INQ56_RS11775	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
INQ56_RS11780	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
INQ56_RS11785	COG2384	SAM-dependent methyltransferase
INQ56_RS11790	COG2010	Cytochrome c
INQ56_RS11795	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
INQ56_RS11800	COG0358	DNA primase activity
INQ56_RS11805	COG1671	Belongs to the UPF0178 family
INQ56_RS11810	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
INQ56_RS11815	COG0517	IMP dehydrogenase activity
INQ56_RS11820	COG0751	glycine-tRNA ligase activity
INQ56_RS11825	COG0752	glycyl-tRNA synthetase alpha subunit
INQ56_RS11830	COG1381	Involved in DNA repair and RecF pathway recombination
INQ56_RS11840	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
INQ56_RS11845	COG0295	cytidine deaminase activity
INQ56_RS11850	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
INQ56_RS11855	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
INQ56_RS11860	COG1480	7TM receptor with intracellular HD hydrolase
INQ56_RS11865	COG1702	phosphate starvation-inducible protein PhoH
INQ56_RS11870	COG0561	phosphatase activity
INQ56_RS11885	COG4864	UPF0365 protein
INQ56_RS11890	COG1030	water channel activity
INQ56_RS11895	COG1610	YqeY-like protein
INQ56_RS11905	COG1283	sodium-dependent phosphate transmembrane transporter activity
INQ56_RS11910	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
INQ56_RS11915	COG1385	rRNA (uridine-N3-)-methyltransferase activity
INQ56_RS11920	COG2264	protein methyltransferase activity
INQ56_RS11925	COG0484	heat shock protein binding
INQ56_RS11930	COG0443	Heat shock 70 kDa protein
INQ56_RS11935	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
INQ56_RS11940	COG1420	regulation of RNA biosynthetic process
INQ56_RS11945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
INQ56_RS11950	COG0481	GTPase activity
INQ56_RS11960	COG0860	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS11965	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
INQ56_RS11970	COG0268	Binds directly to 16S ribosomal RNA
INQ56_RS11975	COG1466	dna polymerase III delta subunit
INQ56_RS11985	COG0658	competence protein
INQ56_RS11985	COG2333	competence protein COMEC
INQ56_RS11990	COG2131	deaminase
INQ56_RS11995	COG1555	photosystem II stabilization
INQ56_RS11995	COG1596	polysaccharide export
INQ56_RS12000	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
INQ56_RS12005	COG2226	methyltransferase
INQ56_RS12010	COG0799	negative regulation of ribosome biogenesis
INQ56_RS12015	COG1713	HD superfamily hydrolase involved in NAD metabolism
INQ56_RS12020	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
INQ56_RS12025	COG1534	Rna-binding protein
INQ56_RS12030	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
INQ56_RS12035	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
INQ56_RS12040	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
INQ56_RS12055	COG2755	lipolytic protein G-D-S-L family
INQ56_RS12065	COG0457	Tetratricopeptide repeat
INQ56_RS12125	COG1131	(ABC) transporter
INQ56_RS12150	COG2160	L-arabinose isomerase activity
INQ56_RS12165	COG1609	Transcriptional regulator
INQ56_RS12175	COG1846	Transcriptional regulator
INQ56_RS12185	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
INQ56_RS12190	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
INQ56_RS12195	COG1733	regulation of RNA biosynthetic process
INQ56_RS12200	COG0657	acetylesterase activity
INQ56_RS12230	COG2602	Beta-lactamase
INQ56_RS12235	COG1960	acyl-CoA dehydrogenase activity
INQ56_RS12240	COG1126	abc transporter atp-binding protein
INQ56_RS12245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS12250	COG0765	amino acid transport
INQ56_RS12260	COG3546	catalase activity
INQ56_RS12265	COG1063	alcohol dehydrogenase
INQ56_RS12275	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS12285	COG1115	amino acid carrier protein
INQ56_RS12290	COG0583	DNA-binding transcription factor activity
INQ56_RS12295	COG1063	alcohol dehydrogenase
INQ56_RS12300	COG2226	methyltransferase
INQ56_RS12320	COG0626	cystathionine gamma-synthase activity
INQ56_RS12325	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
INQ56_RS12330	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
INQ56_RS12335	COG2226	methyltransferase
INQ56_RS12350	COG0768	penicillin binding
INQ56_RS12355	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
INQ56_RS12360	COG0572	uridine kinase
INQ56_RS12365	COG0826	peptidase U32
INQ56_RS12370	COG0826	peptidase U32
INQ56_RS12375	COG4122	O-methyltransferase activity
INQ56_RS12380	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
INQ56_RS12385	COG0183	Belongs to the thiolase family
INQ56_RS12390	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS12395	COG1268	BioY protein
INQ56_RS12405	COG3906	Belongs to the UPF0473 family
INQ56_RS12410	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
INQ56_RS12415	COG4472	Bacterial protein of unknown function (DUF965)
INQ56_RS12420	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
INQ56_RS12425	COG0628	permease
INQ56_RS12435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS12440	COG0765	amino acid transport
INQ56_RS12445	COG0765	amino acid transport
INQ56_RS12460	COG3881	PFAM PRC-barrel domain
INQ56_RS12465	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
INQ56_RS12470	COG0457	Tetratricopeptide repeat
INQ56_RS12475	COG0482	sulfurtransferase activity
INQ56_RS12480	COG1104	cysteine desulfurase activity
INQ56_RS12485	COG1959	2 iron, 2 sulfur cluster binding
INQ56_RS12490	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
INQ56_RS12495	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
INQ56_RS12510	COG0124	histidyl-tRNA synthetase
INQ56_RS12520	COG3103	Sh3 type 3 domain protein
INQ56_RS12520	COG0860	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS12520	COG4991	sh3 domain protein
INQ56_RS12525	COG1490	D-aminoacyl-tRNA deacylase activity
INQ56_RS12530	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
INQ56_RS12535	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
INQ56_RS12540	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
INQ56_RS12540	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
INQ56_RS12545	COG5416	Lipopolysaccharide assembly protein A domain
INQ56_RS12550	COG0490	domain, Protein
INQ56_RS12555	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
INQ56_RS12555	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
INQ56_RS12565	COG2244	polysaccharide biosynthetic process
INQ56_RS12570	COG2323	membrane
INQ56_RS12580	COG1862	Preprotein translocase
INQ56_RS12585	COG0343	queuine tRNA-ribosyltransferase activity
INQ56_RS12590	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
INQ56_RS12600	COG2255	four-way junction helicase activity
INQ56_RS12605	COG0632	four-way junction helicase activity
INQ56_RS12615	COG2112	serine threonine protein kinase
INQ56_RS12630	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
INQ56_RS12645	COG1388	LysM domain
INQ56_RS12650	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
INQ56_RS12655	COG0157	Belongs to the NadC ModD family
INQ56_RS12660	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
INQ56_RS12665	COG1104	cysteine desulfurase activity
INQ56_RS12670	COG1827	regulation of RNA biosynthetic process
INQ56_RS12675	COG0077	Prephenate dehydratase
INQ56_RS12680	COG4492	Belongs to the UPF0735 family
INQ56_RS12685	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
INQ56_RS12690	COG3290	protein histidine kinase activity
INQ56_RS12695	COG0211	Belongs to the bacterial ribosomal protein bL27 family
INQ56_RS12700	COG2868	ribosomal protein
INQ56_RS12705	COG0261	This protein binds to 23S rRNA in the presence of protein L20
INQ56_RS12710	COG1994	Peptidase M50
INQ56_RS12715	COG0739	heme binding
INQ56_RS12720	COG2894	cell division
INQ56_RS12725	COG0850	regulation of cytokinetic process
INQ56_RS12730	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
INQ56_RS12740	COG1077	Cell shape determining protein MreB Mrl
INQ56_RS12745	COG2003	Belongs to the UPF0758 family
INQ56_RS12750	COG0424	maF-like protein
INQ56_RS12765	COG0285	dihydrofolate synthase activity
INQ56_RS12770	COG0525	valine-tRNA ligase activity
INQ56_RS12780	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
INQ56_RS12785	COG1388	LysM domain
INQ56_RS12790	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
INQ56_RS12795	COG0113	porphobilinogen synthase activity
INQ56_RS12800	COG1587	Uroporphyrinogen-III synthase
INQ56_RS12805	COG0181	hydroxymethylbilane synthase activity
INQ56_RS12810	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
INQ56_RS12815	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
INQ56_RS12840	COG0218	Necessary for normal cell division and for the maintenance of normal septation
INQ56_RS12845	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
INQ56_RS12850	COG1067	ATP-dependent peptidase activity
INQ56_RS12850	COG0470	DNA polymerase III
INQ56_RS12855	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
INQ56_RS12860	COG0544	peptidyl-prolyl cis-trans isomerase activity
INQ56_RS12865	COG0457	Tetratricopeptide repeat
INQ56_RS12865	COG1477	protein flavinylation
INQ56_RS12870	COG0066	3-isopropylmalate dehydratase activity
INQ56_RS12875	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
INQ56_RS12880	COG0473	3-isopropylmalate dehydrogenase activity
INQ56_RS12885	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
INQ56_RS12890	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
INQ56_RS12895	COG0440	acetolactate synthase activity
INQ56_RS12900	COG0028	Belongs to the TPP enzyme family
INQ56_RS12905	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
INQ56_RS12910	COG2706	6-phosphogluconolactonase activity
INQ56_RS12915	COG3339	Conserved Protein
INQ56_RS12920	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
INQ56_RS12925	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
INQ56_RS12930	COG1696	Membrane protein involved in D-alanine export
INQ56_RS12935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
INQ56_RS12970	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
INQ56_RS12990	COG0622	Phosphoesterase
INQ56_RS12995	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
INQ56_RS13000	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
INQ56_RS13005	COG5401	PFAM Sporulation and spore germination
INQ56_RS13010	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
INQ56_RS13015	COG1846	Transcriptional regulator
INQ56_RS13020	COG2197	response regulator
INQ56_RS13025	COG2851	Citrate transporter
INQ56_RS13030	COG0583	DNA-binding transcription factor activity
INQ56_RS13035	COG2828	Protein conserved in bacteria
INQ56_RS13045	COG0824	Thioesterase
INQ56_RS13050	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
INQ56_RS13055	COG1053	succinate dehydrogenase
INQ56_RS13060	COG2009	succinate dehydrogenase
INQ56_RS13065	COG1719	4-vinyl reductase, 4VR
INQ56_RS13070	COG0527	aspartate kinase activity
INQ56_RS13075	COG0322	excinuclease ABC activity
INQ56_RS13080	COG3118	belongs to the thioredoxin family
INQ56_RS13085	COG3534	alpha-L-arabinofuranosidase
INQ56_RS13090	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
INQ56_RS13095	COG2086	electron transfer activity
INQ56_RS13100	COG1024	Enoyl-CoA hydratase
INQ56_RS13105	COG1309	transcriptional regulator
INQ56_RS13110	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS13120	COG3766	membrane
INQ56_RS13125	COG1193	negative regulation of DNA recombination
INQ56_RS13130	COG1796	DNA polymerase
INQ56_RS13130	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
INQ56_RS13135	COG1286	toxin biosynthetic process
INQ56_RS13140	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
INQ56_RS13145	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
INQ56_RS13150	COG0072	phenylalanine-tRNA ligase activity
INQ56_RS13150	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INQ56_RS13155	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
INQ56_RS13160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
INQ56_RS13170	COG1966	Carbon starvation protein
INQ56_RS13175	COG1363	Peptidase, m42
INQ56_RS13185	COG3326	Membrane
INQ56_RS13190	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
INQ56_RS13195	COG0291	Belongs to the bacterial ribosomal protein bL35 family
INQ56_RS13200	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
INQ56_RS13205	COG1346	cytolysis
INQ56_RS13215	COG3279	Response regulator of the LytR AlgR family
INQ56_RS13220	COG3275	phosphorelay sensor kinase activity
INQ56_RS13225	COG1011	Hydrolase
INQ56_RS13235	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
INQ56_RS13245	COG0398	Pfam SNARE associated Golgi protein
INQ56_RS13250	COG1484	DNA-dependent DNA replication
INQ56_RS13255	COG3611	Membrane attachment protein
INQ56_RS13260	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
INQ56_RS13270	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
INQ56_RS13275	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
INQ56_RS13280	COG0237	dephospho-CoA kinase activity
INQ56_RS13285	COG1971	Probably functions as a manganese efflux pump
INQ56_RS13290	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
INQ56_RS13295	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
INQ56_RS13295	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
INQ56_RS13300	COG5002	protein histidine kinase activity
INQ56_RS13305	COG0745	RESPONSE REGULATOR receiver
INQ56_RS13310	COG0039	L-malate dehydrogenase activity
INQ56_RS13315	COG0538	isocitrate dehydrogenase activity
INQ56_RS13320	COG0372	Belongs to the citrate synthase family
INQ56_RS13325	COG2707	UPF0756 membrane protein
INQ56_RS13330	COG0628	permease
INQ56_RS13335	COG3030	protein affecting phage T7 exclusion by the F plasmid
INQ56_RS13345	COG0205	6-phosphofructokinase activity
INQ56_RS13350	COG0825	malonyl-CoA metabolic process
INQ56_RS13355	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
INQ56_RS13360	COG0281	malic enzyme
INQ56_RS13365	COG0587	DNA-directed DNA polymerase activity
INQ56_RS13385	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
INQ56_RS13395	COG4109	DRTGG domain
INQ56_RS13400	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
INQ56_RS13405	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS13415	COG0165	Argininosuccinate lyase
INQ56_RS13420	COG0137	argininosuccinate synthase activity
INQ56_RS13425	COG0521	Mo-molybdopterin cofactor biosynthetic process
INQ56_RS13430	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
INQ56_RS13435	COG0827	DNA restriction-modification system
INQ56_RS13440	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
INQ56_RS13445	COG3874	Sporulation protein YtfJ
INQ56_RS13455	COG1714	RDD family
INQ56_RS13460	COG0616	signal peptide processing
INQ56_RS13465	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
INQ56_RS13475	COG3239	Fatty acid desaturase
INQ56_RS13480	COG4585	Histidine kinase
INQ56_RS13485	COG2197	response regulator
INQ56_RS13490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS13495	COG0745	RESPONSE REGULATOR receiver
INQ56_RS13500	COG2205	protein histidine kinase activity
INQ56_RS13505	COG0772	Belongs to the SEDS family
INQ56_RS13510	COG1695	Transcriptional regulator
INQ56_RS13515	COG1136	(ABC) transporter
INQ56_RS13520	COG0577	efflux transmembrane transporter activity
INQ56_RS13525	COG0402	S-adenosylhomocysteine deaminase activity
INQ56_RS13530	COG2249	NAD(P)H dehydrogenase (quinone) activity
INQ56_RS13545	COG1279	arginine transmembrane transporter activity
INQ56_RS13550	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
INQ56_RS13560	COG0301	tRNA thio-modification
INQ56_RS13565	COG1104	cysteine desulfurase activity
INQ56_RS13570	COG1114	Component of the transport system for branched-chain amino acids
INQ56_RS13575	COG1114	Component of the transport system for branched-chain amino acids
INQ56_RS13580	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
INQ56_RS13585	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
INQ56_RS13590	COG1309	transcriptional regulator
INQ56_RS13595	COG1956	GAF domain-containing protein
INQ56_RS13600	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
INQ56_RS13610	COG1335	isochorismatase
INQ56_RS13620	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
INQ56_RS13625	COG2329	Antibiotic biosynthesis monooxygenase
INQ56_RS13630	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
INQ56_RS13635	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
INQ56_RS13640	COG0454	-acetyltransferase
INQ56_RS13645	COG0517	IMP dehydrogenase activity
INQ56_RS13650	COG0123	including yeast histone deacetylase and acetoin utilization protein
INQ56_RS13655	COG1609	Transcriptional regulator
INQ56_RS13660	COG1605	Chorismate mutase
INQ56_RS13660	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
INQ56_RS13665	COG3118	belongs to the thioredoxin family
INQ56_RS13670	COG4980	gas vesicle protein
INQ56_RS13675	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
INQ56_RS13680	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
INQ56_RS13685	COG1674	ftsk spoiiie
INQ56_RS13690	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INQ56_RS13695	COG4848	Belongs to the UPF0354 family
INQ56_RS13700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS13715	COG1363	Peptidase, m42
INQ56_RS13720	COG5584	Small secreted protein
INQ56_RS13725	COG0281	malic enzyme
INQ56_RS13730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS13735	COG0220	tRNA (guanine-N7-)-methyltransferase activity
INQ56_RS13745	COG0510	thiamine kinase activity
INQ56_RS13750	COG1597	lipid kinase activity
INQ56_RS13760	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
INQ56_RS13765	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
INQ56_RS13770	COG3340	Belongs to the peptidase S51 family
INQ56_RS13775	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
INQ56_RS13780	COG2252	PERMEase
INQ56_RS13785	COG1349	DNA-binding transcription factor activity
INQ56_RS13790	COG1187	pseudouridine synthase activity
INQ56_RS13795	COG2244	polysaccharide biosynthetic process
INQ56_RS13800	COG2081	HI0933 family
INQ56_RS13810	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
INQ56_RS13825	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
INQ56_RS13830	COG5578	integral membrane protein
INQ56_RS13835	COG0673	inositol 2-dehydrogenase activity
INQ56_RS13840	COG1653	transport
INQ56_RS13845	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
INQ56_RS13850	COG4209	transmembrane transport
INQ56_RS13855	COG2207	Transcriptional regulator
INQ56_RS13860	COG1733	regulation of RNA biosynthetic process
INQ56_RS13865	COG2814	Major facilitator Superfamily
INQ56_RS13870	COG0656	L-ascorbic acid biosynthetic process
INQ56_RS13875	COG1653	transport
INQ56_RS13880	COG0395	ABC-type sugar transport system, permease component
INQ56_RS13885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
INQ56_RS13890	COG1073	alpha beta
INQ56_RS13895	COG0495	leucyl-tRNA aminoacylation
INQ56_RS13905	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS13905	COG2202	Pas domain
INQ56_RS13915	COG2433	Pfam Transposase IS66
INQ56_RS13920	COG0577	efflux transmembrane transporter activity
INQ56_RS13925	COG1136	(ABC) transporter
INQ56_RS13935	COG1131	(ABC) transporter
INQ56_RS13940	COG1725	Transcriptional regulator
INQ56_RS13960	COG1242	4 iron, 4 sulfur cluster binding
INQ56_RS13965	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
INQ56_RS13970	COG4326	sporulation control protein
INQ56_RS13980	COG2267	carboxylic ester hydrolase activity
INQ56_RS13985	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
INQ56_RS13990	COG0367	asparagine synthase
INQ56_RS13995	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
INQ56_RS14000	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
INQ56_RS14010	COG1506	peptidase
INQ56_RS14015	COG1233	COG1233 Phytoene dehydrogenase and related
INQ56_RS14035	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
INQ56_RS14040	COG1116	anion transmembrane transporter activity
INQ56_RS14045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
INQ56_RS14055	COG0494	nUDIX hydrolase
INQ56_RS14060	COG2310	stress, protein
INQ56_RS14075	COG4824	toxin secretion phage lysis holin
INQ56_RS14085	COG0783	Belongs to the Dps family
INQ56_RS14100	COG1854	S-ribosylhomocysteine lyase activity
INQ56_RS14105	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
INQ56_RS14110	COG0288	reversible hydration of carbon dioxide
INQ56_RS14115	COG3443	Belongs to the bacterial solute-binding protein 9 family
INQ56_RS14115	COG0803	Belongs to the bacterial solute-binding protein 9 family
INQ56_RS14125	COG1271	oxidase subunit
INQ56_RS14130	COG1294	oxidase, subunit
INQ56_RS14145	COG4948	Mandelate Racemase Muconate Lactonizing
INQ56_RS14150	COG0318	PFAM AMP-dependent synthetase and ligase
INQ56_RS14155	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
INQ56_RS14160	COG0596	Alpha beta hydrolase
INQ56_RS14165	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
INQ56_RS14170	COG1169	isochorismate synthase
INQ56_RS14175	COG1575	Belongs to the MenA family. Type 1 subfamily
INQ56_RS14180	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
INQ56_RS14310	COG3859	Proton-coupled thiamine transporter YuaJ
INQ56_RS14315	COG1247	-acetyltransferase
INQ56_RS14320	COG3339	Conserved Protein
INQ56_RS14325	COG0772	Belongs to the SEDS family
INQ56_RS14330	COG0772	Belongs to the SEDS family
INQ56_RS14335	COG2268	Band 7 protein
INQ56_RS14340	COG1585	Membrane protein implicated in regulation of membrane protease activity
INQ56_RS14345	COG2318	DinB family
INQ56_RS14350	COG1454	alcohol dehydrogenase
INQ56_RS14355	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS14360	COG1510	regulation of RNA biosynthetic process
INQ56_RS14375	COG5632	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS14375	COG3409	Peptidoglycan-binding domain 1 protein
INQ56_RS14430	COG3778	Protein conserved in bacteria
INQ56_RS14435	COG3299	homolog of phage Mu protein gp47
INQ56_RS14440	COG3628	GPW Gp25 family protein
INQ56_RS14450	COG4193	domain, Protein
INQ56_RS14455	COG1652	LysM domain
INQ56_RS14460	COG3953	SLT domain
INQ56_RS14460	COG5280	Phage tail tape measure protein TP901
INQ56_RS14460	COG5280	Phage tail tape measure protein TP901
INQ56_RS14460	COG3953	SLT domain
INQ56_RS14515	COG4653	Phage capsid family
INQ56_RS14520	COG0338	D12 class N6 adenine-specific DNA methyltransferase
INQ56_RS14525	COG5518	Phage portal protein
INQ56_RS14530	COG1783	phage Terminase large subunit
INQ56_RS14535	COG5484	DNA packaging
INQ56_RS14540	COG1595	DNA-templated transcription, initiation
INQ56_RS14550	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
INQ56_RS14570	COG1396	sequence-specific DNA binding
INQ56_RS14580	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
INQ56_RS14595	COG0628	permease
INQ56_RS14605	COG0673	inositol 2-dehydrogenase activity
INQ56_RS14610	COG0693	protein deglycase activity
INQ56_RS14615	COG0840	transmembrane signaling receptor activity
INQ56_RS14620	COG0840	transmembrane signaling receptor activity
INQ56_RS14625	COG0840	transmembrane signaling receptor activity
INQ56_RS14630	COG0840	transmembrane signaling receptor activity
INQ56_RS14645	COG2070	2-Nitropropane dioxygenase
INQ56_RS14650	COG0432	Pfam Uncharacterised protein family UPF0047
INQ56_RS14655	COG1253	flavin adenine dinucleotide binding
INQ56_RS14660	COG2738	Putative neutral zinc metallopeptidase
INQ56_RS14670	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
INQ56_RS14685	COG0166	Belongs to the GPI family
INQ56_RS14690	COG1979	alcohol dehydrogenase
INQ56_RS14695	COG1979	alcohol dehydrogenase
INQ56_RS14700	COG2155	Conserved Protein
INQ56_RS14705	COG1098	S1 RNA binding domain
INQ56_RS14710	COG0436	Aminotransferase
INQ56_RS14715	COG1522	sequence-specific DNA binding
INQ56_RS14720	COG2267	carboxylic ester hydrolase activity
INQ56_RS14730	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
INQ56_RS14735	COG2205	protein histidine kinase activity
INQ56_RS14750	COG5018	Exonuclease
INQ56_RS14755	COG2814	Major facilitator Superfamily
INQ56_RS14760	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
INQ56_RS14765	COG3011	Protein conserved in bacteria
INQ56_RS14775	COG3290	protein histidine kinase activity
INQ56_RS14780	COG4565	transcriptional regulatory protein
INQ56_RS14785	COG1744	ABC transporter substrate-binding protein PnrA-like
INQ56_RS14790	COG3845	ABC transporter
INQ56_RS14795	COG4603	Belongs to the binding-protein-dependent transport system permease family
INQ56_RS14800	COG1079	Belongs to the binding-protein-dependent transport system permease family
INQ56_RS14805	COG3493	citrate carrier protein
INQ56_RS14815	COG2111	Na H antiporter
INQ56_RS14815	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
INQ56_RS14820	COG2111	Na H antiporter
INQ56_RS14825	COG1006	Multisubunit Na H antiporter MnhC subunit
INQ56_RS14830	COG0651	ATP synthesis coupled electron transport
INQ56_RS14835	COG1863	multisubunit Na H antiporter MnhE subunit
INQ56_RS14840	COG2212	antiporter activity
INQ56_RS14845	COG1320	monovalent cation:proton antiporter activity
INQ56_RS14850	COG2050	protein possibly involved in aromatic compounds catabolism
INQ56_RS14855	COG2197	response regulator
INQ56_RS14860	COG4585	Histidine kinase
INQ56_RS14870	COG0142	geranyltranstransferase activity
INQ56_RS14885	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
INQ56_RS14890	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
INQ56_RS14895	COG1335	isochorismatase
INQ56_RS14900	COG5506	Protein of unknown function (DUF1694)
INQ56_RS14920	COG0628	permease
INQ56_RS14935	COG1418	mRNA catabolic process
INQ56_RS14940	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS14950	COG1511	domain protein
INQ56_RS14955	COG1674	ftsk spoiiie
INQ56_RS14955	COG0433	COG0433 Predicted ATPase
INQ56_RS14960	COG4499	WXG100 protein secretion system (Wss), protein YukC
INQ56_RS14965	COG5417	Belongs to the EsaB family
INQ56_RS14970	COG4842	Belongs to the WXG100 family
INQ56_RS14975	COG2508	Transcriptional regulator
INQ56_RS14975	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
INQ56_RS14980	COG0686	Belongs to the AlaDH PNT family
INQ56_RS14985	COG1268	BioY protein
INQ56_RS14990	COG2056	Na+-H+ antiporter family
INQ56_RS14995	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
INQ56_RS15000	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
INQ56_RS15005	COG3584	3D domain protein
INQ56_RS15020	COG1252	NADH dehydrogenase
INQ56_RS15025	COG0492	ferredoxin-NADP+ reductase activity
INQ56_RS15040	COG0789	Transcriptional regulator
INQ56_RS15045	COG5504	Zn-dependent protease
INQ56_RS15050	COG0316	Belongs to the HesB IscA family
INQ56_RS15055	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
INQ56_RS15060	COG4844	belongs to the
INQ56_RS15065	COG1252	NADH dehydrogenase
INQ56_RS15075	COG4837	Protein of unknown function (DUF1462)
INQ56_RS15080	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
INQ56_RS15085	COG1506	peptidase
INQ56_RS15085	COG4946	Tricorn protease homolog
INQ56_RS15085	COG0823	Involved in the tonB-independent uptake of proteins
INQ56_RS15090	COG0083	homoserine kinase activity
INQ56_RS15095	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
INQ56_RS15100	COG0460	homoserine dehydrogenase
INQ56_RS15105	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
INQ56_RS15110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
INQ56_RS15115	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
INQ56_RS15120	COG0647	UMP catabolic process
INQ56_RS15125	COG2445	Protein of unknown function DUF86
INQ56_RS15130	COG4470	Protein conserved in bacteria
INQ56_RS15140	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
INQ56_RS15145	COG0739	heme binding
INQ56_RS15165	COG3377	Domain of unknown function (DUF1805)
INQ56_RS15170	COG0737	Belongs to the 5'-nucleotidase family
INQ56_RS15175	COG1801	Protein of unknown function DUF72
INQ56_RS15180	COG2508	Transcriptional regulator
INQ56_RS15185	COG2140	Oxalate decarboxylase
INQ56_RS15190	COG2814	Major facilitator Superfamily
INQ56_RS15195	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
INQ56_RS15200	COG2356	endonuclease I
INQ56_RS15210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS15215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS15220	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS15240	COG0642	Histidine kinase
INQ56_RS15240	COG5002	protein histidine kinase activity
INQ56_RS15245	COG0745	RESPONSE REGULATOR receiver
INQ56_RS15250	COG2311	Membrane
INQ56_RS15260	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
INQ56_RS15265	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
INQ56_RS15270	COG1309	transcriptional regulator
INQ56_RS15285	COG0719	Fe-S assembly protein
INQ56_RS15290	COG0822	iron-sulfur transferase activity
INQ56_RS15295	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
INQ56_RS15300	COG0719	Fe-S assembly protein
INQ56_RS15305	COG0396	ATPase activity
INQ56_RS15315	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
INQ56_RS15320	COG1464	Belongs to the NlpA lipoprotein family
INQ56_RS15325	COG2011	ABC-type metal ion transport system permease component
INQ56_RS15330	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
INQ56_RS15340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
INQ56_RS15345	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
INQ56_RS15355	COG0509	glycine decarboxylation via glycine cleavage system
INQ56_RS15360	COG1393	Belongs to the ArsC family
INQ56_RS15365	COG1960	acyl-CoA dehydrogenase activity
INQ56_RS15370	COG0183	Belongs to the thiolase family
INQ56_RS15375	COG1250	3-hydroxyacyl-CoA dehydrogenase
INQ56_RS15375	COG1024	Enoyl-CoA hydratase
INQ56_RS15390	COG5577	PFAM Coat F domain
INQ56_RS15400	COG1120	ATPase activity
INQ56_RS15410	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS15415	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
INQ56_RS15420	COG0745	RESPONSE REGULATOR receiver
INQ56_RS15425	COG2770	Histidine kinase
INQ56_RS15425	COG2205	protein histidine kinase activity
INQ56_RS15435	COG1309	transcriptional regulator
INQ56_RS15440	COG0114	fumarate hydratase activity
INQ56_RS15450	COG0697	spore germination
INQ56_RS15455	COG0814	amino acid
INQ56_RS15470	COG2197	response regulator
INQ56_RS15475	COG4585	Histidine kinase
INQ56_RS15480	COG4758	membrane
INQ56_RS15490	COG1842	Phage shock protein A
INQ56_RS15495	COG4758	membrane
INQ56_RS15500	COG2096	Adenosyltransferase
INQ56_RS15505	COG1120	ATPase activity
INQ56_RS15510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS15515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS15525	COG2721	sulfolactate sulfo-lyase activity
INQ56_RS15530	COG0246	Mannitol dehydrogenase
INQ56_RS15535	COG1609	Transcriptional regulator
INQ56_RS15540	COG1904	glucuronate isomerase
INQ56_RS15545	COG2205	protein histidine kinase activity
INQ56_RS15550	COG0745	RESPONSE REGULATOR receiver
INQ56_RS15555	COG1120	ATPase activity
INQ56_RS15560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS15565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS15570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS15575	COG0531	amino acid
INQ56_RS15590	COG1988	membrane-bound metal-dependent
INQ56_RS15595	COG1368	sulfuric ester hydrolase activity
INQ56_RS15600	COG0725	ABC transporter, periplasmic molybdate-binding protein
INQ56_RS15605	COG4149	molybdate abc transporter
INQ56_RS15610	COG0656	L-ascorbic acid biosynthetic process
INQ56_RS15615	COG1940	carbohydrate kinase activity
INQ56_RS15620	COG0025	NhaP-type Na H and K H
INQ56_RS15625	COG2860	membrane
INQ56_RS15630	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
INQ56_RS15635	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
INQ56_RS15640	COG2217	Heavy metal translocating P-type atpase
INQ56_RS15645	COG1121	(ABC) transporter
INQ56_RS15650	COG1108	ABC-type Mn2 Zn2 transport systems permease components
INQ56_RS15655	COG0803	Belongs to the bacterial solute-binding protein 9 family
INQ56_RS15665	COG3226	Transcriptional regulator
INQ56_RS15670	COG0784	Response regulator, receiver
INQ56_RS15675	COG4191	Histidine kinase
INQ56_RS15680	COG1027	Aspartate ammonia-lyase
INQ56_RS15695	COG2217	Heavy metal translocating P-type atpase
INQ56_RS15700	COG2608	mercury ion transmembrane transporter activity
INQ56_RS15705	COG1937	Protein conserved in bacteria
INQ56_RS15725	COG0463	Glycosyl transferase, family 2
INQ56_RS15725	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
INQ56_RS15735	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
INQ56_RS15745	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
INQ56_RS15755	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
INQ56_RS15760	COG0557	exoribonuclease II activity
INQ56_RS15765	COG1647	Serine aminopeptidase, S33
INQ56_RS15770	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
INQ56_RS15775	COG2002	toxin-antitoxin pair type II binding
INQ56_RS15780	COG1476	TRANSCRIPTIONal
INQ56_RS15785	COG1396	sequence-specific DNA binding
INQ56_RS15790	COG1396	sequence-specific DNA binding
INQ56_RS15795	COG1733	regulation of RNA biosynthetic process
INQ56_RS15805	COG1174	glycine betaine transport
INQ56_RS15810	COG1732	Glycine betaine
INQ56_RS15815	COG1174	glycine betaine transport
INQ56_RS15820	COG1125	glycine betaine transport
INQ56_RS15820	COG0517	IMP dehydrogenase activity
INQ56_RS15825	COG1510	regulation of RNA biosynthetic process
INQ56_RS15830	COG2095	MarC family integral membrane protein
INQ56_RS15840	COG0456	acetyltransferase
INQ56_RS15860	COG1131	(ABC) transporter
INQ56_RS15870	COG0148	phosphopyruvate hydratase activity
INQ56_RS15875	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
INQ56_RS15880	COG0149	triose-phosphate isomerase activity
INQ56_RS15885	COG0126	phosphoglycerate kinase activity
INQ56_RS15890	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
INQ56_RS15895	COG2390	Transcriptional regulator
INQ56_RS15900	COG0833	amino acid
INQ56_RS15905	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
INQ56_RS15910	COG3829	transcription factor binding
INQ56_RS15915	COG2186	Transcriptional regulator
INQ56_RS15920	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
INQ56_RS15930	COG0534	Mate efflux family protein
INQ56_RS15935	COG4608	Belongs to the ABC transporter superfamily
INQ56_RS15940	COG0444	Belongs to the ABC transporter superfamily
INQ56_RS15945	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
INQ56_RS15950	COG0601	transmembrane transport
INQ56_RS15955	COG0747	negative chemotaxis
INQ56_RS15960	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
INQ56_RS15965	COG0110	maltose O-acetyltransferase activity
INQ56_RS15970	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
INQ56_RS15975	COG2244	polysaccharide biosynthetic process
INQ56_RS15980	COG5039	Polysaccharide pyruvyl transferase
INQ56_RS15985	COG1216	Glycosyl transferase, family 2
INQ56_RS15995	COG0438	transferase activity, transferring glycosyl groups
INQ56_RS16000	COG1215	transferase activity, transferring glycosyl groups
INQ56_RS16005	COG0438	transferase activity, transferring glycosyl groups
INQ56_RS16010	COG1086	Polysaccharide biosynthesis protein
INQ56_RS16015	COG0489	protein tyrosine kinase activity
INQ56_RS16020	COG3944	biosynthesis protein
INQ56_RS16025	COG1396	sequence-specific DNA binding
INQ56_RS16035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS16040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS16045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS16050	COG0726	polysaccharide deacetylase
INQ56_RS16055	COG0488	(ABC) transporter
INQ56_RS16075	COG0601	transmembrane transport
INQ56_RS16080	COG0747	negative chemotaxis
INQ56_RS16085	COG1819	glycosyl
INQ56_RS16090	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS16110	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
INQ56_RS16135	COG0740	serine-type endopeptidase activity
INQ56_RS16140	COG1611	Belongs to the LOG family
INQ56_RS16145	COG1694	Mazg nucleotide pyrophosphohydrolase
INQ56_RS16150	COG0659	secondary active sulfate transmembrane transporter activity
INQ56_RS16155	COG0288	reversible hydration of carbon dioxide
INQ56_RS16160	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
INQ56_RS16170	COG1301	dicarboxylic acid transport
INQ56_RS16175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
INQ56_RS16180	COG1737	Transcriptional regulator
INQ56_RS16185	COG2162	N-hydroxyarylamine O-acetyltransferase activity
INQ56_RS16190	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS16195	COG1481	regulation of sporulation
INQ56_RS16200	COG0391	Required for morphogenesis under gluconeogenic growth conditions
INQ56_RS16205	COG1660	Displays ATPase and GTPase activities
INQ56_RS16210	COG1051	belongs to the nudix hydrolase family
INQ56_RS16215	COG0492	ferredoxin-NADP+ reductase activity
INQ56_RS16220	COG3883	PFAM NLP P60 protein
INQ56_RS16220	COG0791	NLP P60 protein
INQ56_RS16225	COG0457	Tetratricopeptide repeat
INQ56_RS16230	COG0140	phosphoribosyl-ATP diphosphatase activity
INQ56_RS16230	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
INQ56_RS16235	COG0107	imidazoleglycerol-phosphate synthase activity
INQ56_RS16240	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
INQ56_RS16245	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
INQ56_RS16250	COG0131	Imidazoleglycerol-phosphate dehydratase
INQ56_RS16255	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
INQ56_RS16260	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
INQ56_RS16265	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
INQ56_RS16270	COG4990	cell redox homeostasis
INQ56_RS16275	COG2910	NAD(P)H-binding
INQ56_RS16280	COG1959	2 iron, 2 sulfur cluster binding
INQ56_RS16285	COG0110	maltose O-acetyltransferase activity
INQ56_RS16290	COG0546	phosphoglycolate phosphatase activity
INQ56_RS16295	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
INQ56_RS16300	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
INQ56_RS16305	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
INQ56_RS16310	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
INQ56_RS16315	COG0363	glucosamine-6-phosphate deaminase activity
INQ56_RS16320	COG2188	Transcriptional regulator
INQ56_RS16325	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
INQ56_RS16330	COG1950	PFAM Membrane protein of
INQ56_RS16335	COG1983	PspC domain protein
INQ56_RS16340	COG3595	metallopeptidase activity
INQ56_RS16355	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
INQ56_RS16365	COG4897	Protein conserved in bacteria
INQ56_RS16370	COG3848	Pyruvate phosphate dikinase
INQ56_RS16370	COG0574	Belongs to the PEP-utilizing enzyme family
INQ56_RS16375	COG1309	transcriptional regulator
INQ56_RS16380	COG2814	Major facilitator Superfamily
INQ56_RS16390	COG0745	RESPONSE REGULATOR receiver
INQ56_RS16395	COG5002	protein histidine kinase activity
INQ56_RS16400	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
INQ56_RS16405	COG0463	Glycosyl transferase, family 2
INQ56_RS16410	COG1113	amino acid transport
INQ56_RS16415	COG0778	Nitroreductase
INQ56_RS16420	COG1733	regulation of RNA biosynthetic process
INQ56_RS16425	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
INQ56_RS16435	COG3409	Peptidoglycan-binding domain 1 protein
INQ56_RS16435	COG0793	Belongs to the peptidase S41A family
INQ56_RS16440	COG0730	response to heat
INQ56_RS16445	COG3883	PFAM NLP P60 protein
INQ56_RS16445	COG0791	NLP P60 protein
INQ56_RS16450	COG2177	Part of the ABC transporter FtsEX involved in
INQ56_RS16455	COG2884	Cell division ATP-binding protein ftsE
INQ56_RS16460	COG2010	Cytochrome c
INQ56_RS16465	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
INQ56_RS16485	COG0653	protein targeting
INQ56_RS16490	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
INQ56_RS16495	COG0840	transmembrane signaling receptor activity
INQ56_RS16510	COG1516	flagellar protein fliS
INQ56_RS16515	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
INQ56_RS16520	COG1334	flagellar protein FlaG
INQ56_RS16525	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
INQ56_RS16530	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
INQ56_RS16540	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
INQ56_RS16545	COG4786	Flagellar basal body rod
INQ56_RS16545	COG1256	bacterial-type flagellum assembly
INQ56_RS16550	COG3418	PFAM FlgN family protein
INQ56_RS16565	COG1040	competence protein
INQ56_RS16575	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
INQ56_RS16580	COG1307	EDD domain protein, DegV family
INQ56_RS16585	COG2197	response regulator
INQ56_RS16590	COG4585	Histidine kinase
INQ56_RS16595	COG1739	Uncharacterized protein family UPF0029
INQ56_RS16600	COG1316	TRANSCRIPTIONal
INQ56_RS16605	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
INQ56_RS16610	COG0438	transferase activity, transferring glycosyl groups
INQ56_RS16615	COG1215	transferase activity, transferring glycosyl groups
INQ56_RS16620	COG3206	protein involved in exopolysaccharide biosynthesis
INQ56_RS16625	COG3307	-O-antigen
INQ56_RS16630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
INQ56_RS16635	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
INQ56_RS16640	COG0438	transferase activity, transferring glycosyl groups
INQ56_RS16640	COG0297	glycogen (starch) synthase activity
INQ56_RS16645	COG2244	polysaccharide biosynthetic process
INQ56_RS16660	COG2247	cell wall binding repeat
INQ56_RS16660	COG0860	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS16665	COG0860	N-Acetylmuramoyl-L-alanine amidase
INQ56_RS16665	COG2247	cell wall binding repeat
INQ56_RS16670	COG2385	sporulation resulting in formation of a cellular spore
INQ56_RS16670	COG2247	cell wall binding repeat
INQ56_RS16680	COG1316	TRANSCRIPTIONal
INQ56_RS16685	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
INQ56_RS16690	COG1210	Utp--glucose-1-phosphate uridylyltransferase
INQ56_RS16700	COG1134	teichoic acid transport
INQ56_RS16705	COG1682	transport, permease protein
INQ56_RS16710	COG1216	Glycosyl transferase, family 2
INQ56_RS16745	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
INQ56_RS16750	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
INQ56_RS16755	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
INQ56_RS16760	COG4193	domain, Protein
INQ56_RS16770	COG1482	cell wall glycoprotein biosynthetic process
INQ56_RS16780	COG1175	transmembrane transport
INQ56_RS16785	COG1653	transport
INQ56_RS16790	COG2197	response regulator
INQ56_RS16795	COG2972	Histidine kinase
INQ56_RS16805	COG0454	-acetyltransferase
INQ56_RS16810	COG0800	Aldolase
INQ56_RS16815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
INQ56_RS16820	COG1609	Transcriptional regulator
INQ56_RS16825	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
INQ56_RS16830	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS16835	COG0697	spore germination
INQ56_RS16840	COG0814	amino acid
INQ56_RS16855	COG2814	Major facilitator Superfamily
INQ56_RS16860	COG1316	TRANSCRIPTIONal
INQ56_RS16865	COG0561	phosphatase activity
INQ56_RS16870	COG0791	NLP P60 protein
INQ56_RS16880	COG2843	Capsule synthesis protein
INQ56_RS16890	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
INQ56_RS16895	COG0697	spore germination
INQ56_RS16910	COG1609	Transcriptional regulator
INQ56_RS16915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
INQ56_RS16920	COG1869	D-ribose catabolic process
INQ56_RS16925	COG1129	ABC transporter
INQ56_RS16930	COG1172	Belongs to the binding-protein-dependent transport system permease family
INQ56_RS16935	COG1879	ABC-type sugar transport system periplasmic component
INQ56_RS16940	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
INQ56_RS16945	COG0583	DNA-binding transcription factor activity
INQ56_RS16950	COG0028	Belongs to the TPP enzyme family
INQ56_RS16955	COG3527	Alpha-acetolactate decarboxylase
INQ56_RS16965	COG1522	sequence-specific DNA binding
INQ56_RS16970	COG2059	Chromate
INQ56_RS16975	COG2059	Chromate
INQ56_RS16980	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
INQ56_RS16990	COG4715	Zinc finger, swim domain protein
INQ56_RS16995	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
INQ56_RS17000	COG1366	Belongs to the anti-sigma-factor antagonist family
INQ56_RS17000	COG2202	Pas domain
INQ56_RS17005	COG0561	phosphatase activity
INQ56_RS17020	COG1970	mechanosensitive ion channel activity
INQ56_RS17025	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
INQ56_RS17030	COG0457	Tetratricopeptide repeat
INQ56_RS17035	COG4786	Flagellar basal body rod
INQ56_RS17040	COG4786	Flagellar basal body rod
INQ56_RS17045	COG1077	Cell shape determining protein MreB Mrl
INQ56_RS17050	COG1609	Transcriptional regulator
INQ56_RS17055	COG1846	Transcriptional regulator
INQ56_RS17060	COG2814	Major facilitator Superfamily
INQ56_RS17065	COG0671	phosphoesterase, PA-phosphatase related
INQ56_RS17070	COG0477	Major facilitator Superfamily
INQ56_RS17075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS17080	COG0765	amino acid transport
INQ56_RS17085	COG1126	abc transporter atp-binding protein
INQ56_RS17090	COG0004	ammonium transporteR
INQ56_RS17095	COG0347	Belongs to the P(II) protein family
INQ56_RS17100	COG0739	heme binding
INQ56_RS17105	COG1247	-acetyltransferase
INQ56_RS17115	COG0267	Belongs to the bacterial ribosomal protein bL33 family
INQ56_RS17120	COG0523	cobalamin synthesis protein
INQ56_RS17125	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
INQ56_RS17130	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
INQ56_RS17135	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
INQ56_RS17140	COG2223	nitrite transmembrane transporter activity
INQ56_RS17150	COG2304	oxidoreductase activity
INQ56_RS17155	COG2304	oxidoreductase activity
INQ56_RS17160	COG2385	sporulation resulting in formation of a cellular spore
INQ56_RS17165	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
INQ56_RS17175	COG4836	Membrane
INQ56_RS17185	COG0355	proton-transporting ATP synthase activity, rotational mechanism
INQ56_RS17190	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
INQ56_RS17195	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
INQ56_RS17200	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
INQ56_RS17205	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
INQ56_RS17210	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
INQ56_RS17215	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
INQ56_RS17220	COG0356	it plays a direct role in the translocation of protons across the membrane
INQ56_RS17230	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
INQ56_RS17235	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
INQ56_RS17240	COG4475	Protein of unknown function (DUF436)
INQ56_RS17245	COG0698	ribose 5-phosphate isomerase
INQ56_RS17250	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
INQ56_RS17255	COG1971	Probably functions as a manganese efflux pump
INQ56_RS17260	COG0009	L-threonylcarbamoyladenylate synthase
INQ56_RS17265	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
INQ56_RS17280	COG2890	protein-(glutamine-N5) methyltransferase activity
INQ56_RS17285	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
INQ56_RS17290	COG0789	Transcriptional regulator
INQ56_RS17295	COG0679	Auxin Efflux Carrier
INQ56_RS17300	COG0281	malic enzyme
INQ56_RS17305	COG1435	thymidine kinase activity
INQ56_RS17310	COG0254	rRNA binding
INQ56_RS17315	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
INQ56_RS17320	COG1494	fructose-1,6-bisphosphatase
INQ56_RS17325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
INQ56_RS17330	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
INQ56_RS17335	COG0191	fructose-bisphosphate aldolase activity
INQ56_RS17340	COG2204	response regulator
INQ56_RS17345	COG4821	SIS domain
INQ56_RS17350	COG0504	CTP synthase activity
INQ56_RS17355	COG3343	RNA polymerase activity
INQ56_RS17370	COG1960	acyl-CoA dehydrogenase activity
INQ56_RS17375	COG1960	acyl-CoA dehydrogenase activity
INQ56_RS17380	COG1250	3-hydroxyacyl-CoA dehydrogenase
INQ56_RS17385	COG0183	Belongs to the thiolase family
INQ56_RS17390	COG0247	lactate metabolic process
INQ56_RS17390	COG2181	nitrate reductase activity
INQ56_RS17395	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INQ56_RS17400	COG4294	response to UV
INQ56_RS17410	COG1619	proteins homologs of microcin C7 resistance protein MccF
INQ56_RS17415	COG1132	(ABC) transporter
INQ56_RS17420	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INQ56_RS17425	COG1619	proteins homologs of microcin C7 resistance protein MccF
INQ56_RS17440	COG0018	arginyl-trna synthetase
INQ56_RS17445	COG4506	Protein conserved in bacteria
INQ56_RS17455	COG0010	Belongs to the arginase family
INQ56_RS17460	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
INQ56_RS17465	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
INQ56_RS17475	COG1994	Peptidase M50
INQ56_RS17480	COG1942	4-Oxalocrotonate Tautomerase
INQ56_RS17490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS17495	COG0583	DNA-binding transcription factor activity
INQ56_RS17500	COG0431	NADPH-dependent FMN reductase
INQ56_RS17505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS17510	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
INQ56_RS17515	COG0454	-acetyltransferase
INQ56_RS17520	COG0765	amino acid transport
INQ56_RS17530	COG0765	amino acid transport
INQ56_RS17535	COG1126	abc transporter atp-binding protein
INQ56_RS17540	COG3465	dGTPase activity
INQ56_RS17545	COG1078	dGTPase activity
INQ56_RS17550	COG4844	belongs to the
INQ56_RS17595	COG5444	nuclease activity
INQ56_RS17625	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
INQ56_RS17635	COG0280	phosphate acetyltransferase
INQ56_RS17645	COG1073	alpha beta
INQ56_RS17650	COG1522	sequence-specific DNA binding
INQ56_RS17655	COG2814	Major facilitator Superfamily
INQ56_RS17660	COG0077	Prephenate dehydratase
INQ56_RS17665	COG1917	Cupin 2, conserved barrel domain protein
INQ56_RS17670	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS17675	COG0151	Belongs to the GarS family
INQ56_RS17680	COG0436	Aminotransferase
INQ56_RS17685	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS17690	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
INQ56_RS17695	COG1091	dTDP-4-dehydrorhamnose reductase activity
INQ56_RS17700	COG1088	dTDP-glucose 4,6-dehydratase activity
INQ56_RS17705	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
INQ56_RS17710	COG3980	spore coat polysaccharide biosynthesis protein
INQ56_RS17715	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
INQ56_RS17720	COG2089	acid synthase
INQ56_RS17725	COG0456	acetyltransferase
INQ56_RS17730	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
INQ56_RS17735	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
INQ56_RS17740	COG0463	Glycosyl transferase, family 2
INQ56_RS17760	COG2363	Small membrane protein
INQ56_RS17765	COG2233	PERMEase
INQ56_RS17775	COG1012	belongs to the aldehyde dehydrogenase family
INQ56_RS17780	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
INQ56_RS17785	COG1216	Glycosyl transferase, family 2
INQ56_RS17795	COG0351	phosphomethylpyrimidine kinase
INQ56_RS17825	COG1621	beta-fructofuranosidase activity
INQ56_RS17830	COG1263	PTS System
INQ56_RS17830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS17835	COG3711	transcriptional antiterminator
INQ56_RS17845	COG1404	Belongs to the peptidase S8 family
INQ56_RS17855	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
INQ56_RS17860	COG0778	Nitroreductase
INQ56_RS17865	COG0772	Belongs to the SEDS family
INQ56_RS17875	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
INQ56_RS17880	COG1845	cytochrome c oxidase, subunit III
INQ56_RS17885	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
INQ56_RS17890	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
INQ56_RS17900	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
INQ56_RS17905	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
INQ56_RS17910	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
INQ56_RS17925	COG2246	polysaccharide biosynthetic process
INQ56_RS17950	COG0457	Tetratricopeptide repeat
INQ56_RS17960	COG3162	membrane
INQ56_RS17965	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
INQ56_RS17980	COG0352	thiamine-phosphate diphosphorylase activity
INQ56_RS17985	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
INQ56_RS17990	COG0583	DNA-binding transcription factor activity
INQ56_RS17995	COG1380	Effector of murein hydrolase LrgA
INQ56_RS18000	COG1346	cytolysis
INQ56_RS18005	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
INQ56_RS18010	COG0346	lactoylglutathione lyase activity
INQ56_RS18030	COG0765	amino acid transport
INQ56_RS18035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
INQ56_RS18040	COG0457	Tetratricopeptide repeat
INQ56_RS18050	COG2357	RelA SpoT domain protein
INQ56_RS18055	COG1172	Belongs to the binding-protein-dependent transport system permease family
INQ56_RS18060	COG1129	ABC transporter
INQ56_RS18070	COG3420	alginic acid biosynthetic process
INQ56_RS18075	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
INQ56_RS18085	COG1486	melibiose metabolic process
INQ56_RS18090	COG1447	Phosphotransferase system cellobiose-specific component IIA
INQ56_RS18095	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS18100	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS18105	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS18105	COG3711	transcriptional antiterminator
INQ56_RS18120	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
INQ56_RS18135	COG1595	DNA-templated transcription, initiation
INQ56_RS18145	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
INQ56_RS18150	COG4988	ABC transporter
INQ56_RS18155	COG1294	oxidase, subunit
INQ56_RS18160	COG1271	oxidase subunit
INQ56_RS18170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INQ56_RS18175	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
INQ56_RS18180	COG4509	Sortase family
INQ56_RS18200	COG5386	Cell surface protein
INQ56_RS18205	COG5386	Cell surface protein
INQ56_RS18210	COG5386	Cell surface protein
INQ56_RS18215	COG1733	regulation of RNA biosynthetic process
INQ56_RS18220	COG2514	catechol 2,3-dioxygenase activity
INQ56_RS18225	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS18225	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
INQ56_RS18230	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INQ56_RS18230	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INQ56_RS18240	COG0726	polysaccharide deacetylase
INQ56_RS18245	COG1447	Phosphotransferase system cellobiose-specific component IIA
INQ56_RS18250	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS18255	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS18260	COG1312	Catalyzes the dehydration of D-mannonate
INQ56_RS18265	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
INQ56_RS18270	COG3711	transcriptional antiterminator
INQ56_RS18270	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
INQ56_RS18295	COG1757	Na H antiporter
INQ56_RS18300	COG1027	Aspartate ammonia-lyase
INQ56_RS18305	COG0252	asparaginase activity
INQ56_RS18310	COG1396	sequence-specific DNA binding
INQ56_RS18335	COG4842	Belongs to the WXG100 family
INQ56_RS18340	COG2195	Cleaves the N-terminal amino acid of tripeptides
INQ56_RS18355	COG1737	Transcriptional regulator
INQ56_RS18360	COG2084	Dehydrogenase
INQ56_RS18370	COG2610	gluconate transmembrane transporter activity
INQ56_RS18375	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
INQ56_RS18395	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS18400	COG1263	PTS System
INQ56_RS18400	COG2190	(PTS) system
INQ56_RS18400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS18405	COG3711	transcriptional antiterminator
INQ56_RS18410	COG3878	Protein conserved in bacteria
INQ56_RS18420	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INQ56_RS18425	COG1122	ATPase activity
INQ56_RS18430	COG4721	ABC-type cobalt transport system, permease component
INQ56_RS18435	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
INQ56_RS18470	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
INQ56_RS18475	COG0778	Nitroreductase
INQ56_RS18480	COG1846	Transcriptional regulator
INQ56_RS18485	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
INQ56_RS18490	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
INQ56_RS18495	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
INQ56_RS18500	COG2390	Transcriptional regulator
INQ56_RS18510	COG2755	lipolytic protein G-D-S-L family
INQ56_RS18510	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
INQ56_RS18515	COG0477	Major facilitator Superfamily
INQ56_RS18520	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
INQ56_RS18525	COG2226	methyltransferase
INQ56_RS18535	COG0561	phosphatase activity
INQ56_RS18540	COG0789	Transcriptional regulator
INQ56_RS18545	COG0673	inositol 2-dehydrogenase activity
INQ56_RS18550	COG0840	transmembrane signaling receptor activity
INQ56_RS18555	COG1113	amino acid transport
INQ56_RS18560	COG4335	DNA alkylation repair
INQ56_RS18570	COG1070	Carbohydrate kinase
INQ56_RS18575	COG1737	Transcriptional regulator
INQ56_RS18615	COG0583	DNA-binding transcription factor activity
INQ56_RS18620	COG1609	Transcriptional regulator
INQ56_RS18625	COG2182	Extracellular solute-binding protein
INQ56_RS18630	COG1175	transmembrane transport
INQ56_RS18635	COG3833	ABC-type maltose transport systems, permease component
INQ56_RS18645	COG1874	Beta-galactosidase
INQ56_RS18680	COG2851	Citrate transporter
INQ56_RS18690	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
INQ56_RS18695	COG1131	(ABC) transporter
INQ56_RS18700	COG2824	Alkylphosphonate utilization operon protein PhnA
INQ56_RS18705	COG1929	Belongs to the glycerate kinase type-1 family
INQ56_RS18710	COG2610	gluconate transmembrane transporter activity
INQ56_RS18715	COG3835	regulator
INQ56_RS18720	COG1309	transcriptional regulator
INQ56_RS18725	COG2814	Major facilitator Superfamily
INQ56_RS18735	COG1136	(ABC) transporter
INQ56_RS18740	COG0457	Tetratricopeptide repeat
INQ56_RS18745	COG3711	transcriptional antiterminator
INQ56_RS18750	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS18755	COG2190	(PTS) system
INQ56_RS18755	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS18755	COG1263	PTS System
INQ56_RS18780	COG0494	nUDIX hydrolase
INQ56_RS18795	COG1113	amino acid transport
INQ56_RS18800	COG1609	Transcriptional regulator
INQ56_RS18805	COG2814	Major facilitator Superfamily
INQ56_RS18810	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
INQ56_RS18815	COG2814	Major facilitator Superfamily
INQ56_RS18830	COG5444	nuclease activity
INQ56_RS18845	COG2723	6-phospho-beta-galactosidase activity
INQ56_RS18850	COG1263	PTS System
INQ56_RS18850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
INQ56_RS18850	COG2190	(PTS) system
INQ56_RS18855	COG2188	Transcriptional regulator
INQ56_RS18865	COG0384	phenazine biosynthesis protein PhzF
INQ56_RS18870	COG0583	DNA-binding transcription factor activity
INQ56_RS18890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
INQ56_RS18895	COG3850	Histidine kinase
INQ56_RS18895	COG5002	protein histidine kinase activity
INQ56_RS18905	COG2409	Drug exporters of the RND superfamily
INQ56_RS18910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
INQ56_RS18930	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
INQ56_RS18940	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INQ56_RS18950	COG4720	Psort location CytoplasmicMembrane, score
INQ56_RS18970	COG0456	acetyltransferase
INQ56_RS18975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
INQ56_RS18980	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
INQ56_RS18985	COG4853	Protein conserved in bacteria
INQ56_RS18990	COG4863	YycH protein
INQ56_RS18995	COG5002	protein histidine kinase activity
INQ56_RS19000	COG0745	RESPONSE REGULATOR receiver
INQ56_RS19025	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
INQ56_RS19035	COG2311	Membrane
INQ56_RS19040	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
INQ56_RS19045	COG1309	transcriptional regulator
INQ56_RS19050	COG2124	cytochrome p450
INQ56_RS19055	COG0346	lactoylglutathione lyase activity
INQ56_RS19060	COG0305	Participates in initiation and elongation during chromosome replication
INQ56_RS19075	COG2819	hydrolase of the alpha beta superfamily
INQ56_RS19080	COG1028	Short-chain dehydrogenase reductase Sdr
INQ56_RS19085	COG1169	isochorismate synthase
INQ56_RS19090	COG1021	2,3-dihydroxybenzoate-AMP ligase
INQ56_RS19095	COG3433	isochorismatase activity
INQ56_RS19095	COG1535	isochorismatase
INQ56_RS19100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
INQ56_RS19105	COG3251	PFAM MbtH domain protein
INQ56_RS19110	COG2207	Transcriptional regulator
INQ56_RS19110	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS19115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
INQ56_RS19120	COG2819	hydrolase of the alpha beta superfamily
INQ56_RS19125	COG3093	addiction module antidote protein HigA
INQ56_RS19130	COG2807	transmembrane transport
INQ56_RS19135	COG0359	binds to the 23S rRNA
INQ56_RS19140	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
INQ56_RS19145	COG4241	membrane
INQ56_RS19150	COG1227	inorganic diphosphatase activity
INQ56_RS19160	COG1595	DNA-templated transcription, initiation
INQ56_RS19170	COG0753	catalase activity
INQ56_RS19175	COG0655	NAD(P)H dehydrogenase (quinone) activity
INQ56_RS19180	COG0400	carboxylic ester hydrolase activity
INQ56_RS19185	COG0346	lactoylglutathione lyase activity
INQ56_RS19190	COG1174	glycine betaine transport
INQ56_RS19195	COG0517	IMP dehydrogenase activity
INQ56_RS19195	COG1125	glycine betaine transport
INQ56_RS19200	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
INQ56_RS19205	COG0629	single-stranded DNA binding
INQ56_RS19210	COG0360	Binds together with S18 to 16S ribosomal RNA
INQ56_RS19215	COG0012	GTP binding
INQ56_RS19220	COG4481	Protein conserved in bacteria
INQ56_RS19235	COG3949	Membrane
INQ56_RS19245	COG1475	DNA binding
INQ56_RS19250	COG1192	Involved in chromosome partitioning
INQ56_RS19260	COG1475	DNA binding
INQ56_RS19265	COG0357	Ribosomal RNA small subunit methyltransferase G
INQ56_RS19270	COG0445	tRNA wobble uridine modification
INQ56_RS19275	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
INQ56_RS19280	COG1847	R3H domain protein
INQ56_RS19285	COG0706	membrane insertase activity
INQ56_RS19290	COG0594	ribonuclease P activity
INQ56_RS19295	COG0230	Belongs to the bacterial ribosomal protein bL34 family