B425_RS00025 SM00530 Helix-turn-helix XRE-family like proteins B425_RS00030 SM00530 Helix-turn-helix XRE-family like proteins B425_RS00040 SM01040 BRO family, N-terminal domain B425_RS00080 SM00382 ATPases associated with a variety of cellular activities B425_RS00235 SM00060 Fibronectin type 3 domain B425_RS00315 SM00257 Lysin motif B425_RS00315 SM00644 B425_RS00315 B425_RS00340 SM00829 Enoylreductase B425_RS00410 SM00710 Parallel beta-helix repeats B425_RS00455 SM00257 Lysin motif B425_RS00460 SM00857 Resolvase, N terminal domain B425_RS00470 SM00861 Transketolase, pyrimidine binding domain B425_RS00495 SM00448 cheY-homologous receiver domain B425_RS00560 SM01207 B425_RS00560 B425_RS00565 SM00881 CoA binding domain B425_RS00570 SM00387 Histidine kinase-like ATPases B425_RS00570 SM00433 TopoisomeraseII B425_RS00575 SM00434 DNA Topoisomerase IV B425_RS00615 SM00387 Histidine kinase-like ATPases B425_RS00615 SM00388 His Kinase A (phosphoacceptor) domain B425_RS00620 SM00448 cheY-homologous receiver domain B425_RS00620 SM00862 Transcriptional regulatory protein, C terminal B425_RS00630 SM00606 Cellulose Binding Domain Type IV B425_RS00635 SM00823 Phosphopantetheine attachment site B425_RS00635 SM00824 Thioesterase B425_RS00640 SM00823 Phosphopantetheine attachment site B425_RS00645 SM00823 Phosphopantetheine attachment site B425_RS00645 SM00825 Beta-ketoacyl synthase B425_RS00650 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B425_RS00660 SM00882 Coenzyme A transferase B425_RS00665 SM00882 Coenzyme A transferase B425_RS00675 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS00675 SM00876 Biotin and Thiamin Synthesis associated domain B425_RS00735 SM00878 Biotin carboxylase C-terminal domain B425_RS00815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS00820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B425_RS00840 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B425_RS00855 SM00822 B425_RS00855 B425_RS00920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS00930 SM00564 beta-propeller repeat B425_RS00955 SM00421 helix_turn_helix, Lux Regulon B425_RS00955 SM00448 cheY-homologous receiver domain B425_RS00965 SM00387 Histidine kinase-like ATPases B425_RS00980 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS00980 SM01134 B425_RS00980 B425_RS01035 SM00448 cheY-homologous receiver domain B425_RS01035 SM00862 Transcriptional regulatory protein, C terminal B425_RS01040 SM00387 Histidine kinase-like ATPases B425_RS01045 SM00382 ATPases associated with a variety of cellular activities B425_RS01100 SM01133 B425_RS01100 B425_RS01110 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain B425_RS01200 SM00656 B425_RS01200 B425_RS01240 SM00487 DEAD-like helicases superfamily B425_RS01240 SM00490 helicase superfamily c-terminal domain B425_RS01250 SM01061 CAT RNA binding domain B425_RS01265 SM01060 B425_RS01265 B425_RS01330 SM00382 ATPases associated with a variety of cellular activities B425_RS01355 SM00382 ATPases associated with a variety of cellular activities B425_RS01360 SM00382 ATPases associated with a variety of cellular activities B425_RS01380 SM01060 B425_RS01380 B425_RS01425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS01515 SM00954 Region found in RelA / SpoT proteins B425_RS01540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B425_RS01550 SM00422 helix_turn_helix, mercury resistance B425_RS01685 SM00886 Stress responsive A/B Barrel Domain B425_RS01720 SM01061 CAT RNA binding domain B425_RS01730 SM00640 Glycosyl hydrolases family 32 B425_RS01755 SM00986 Uracil DNA glycosylase superfamily B425_RS01755 SM00987 UreE urease accessory protein, C-terminal domain B425_RS01800 SM00858 B425_RS01800 B425_RS01840 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B425_RS01910 SM00530 Helix-turn-helix XRE-family like proteins B425_RS01965 SM00382 ATPases associated with a variety of cellular activities B425_RS01990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS02005 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS02050 SM00028 Tetratricopeptide repeats B425_RS02070 SM00836 DALR anticodon binding domain B425_RS02070 SM01016 Arginyl tRNA synthetase N terminal dom B425_RS02080 SM00100 Cyclic nucleotide-monophosphate binding domain B425_RS02080 SM00419 helix_turn_helix, cAMP Regulatory protein B425_RS02095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B425_RS02115 SM00155 Phospholipase D. Active site motifs. B425_RS02120 SM00382 ATPases associated with a variety of cellular activities B425_RS02135 SM00155 Phospholipase D. Active site motifs. B425_RS02160 SM00448 cheY-homologous receiver domain B425_RS02185 SM00357 Cold shock protein domain B425_RS02185 SM00382 ATPases associated with a variety of cellular activities B425_RS02185 SM00959 Rho termination factor, N-terminal domain B425_RS02200 SM00919 Malic enzyme, NAD binding domain B425_RS02200 SM01274 B425_RS02200 B425_RS02220 SM00937 B425_RS02220 B425_RS02260 SM00226 Low molecular weight phosphatase family B425_RS02320 SM00382 ATPases associated with a variety of cellular activities B425_RS02355 SM00327 von Willebrand factor (vWF) type A domain B425_RS02360 SM00327 von Willebrand factor (vWF) type A domain B425_RS02370 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS02375 SM00028 Tetratricopeptide repeats B425_RS02425 SM00155 Phospholipase D. Active site motifs. B425_RS02455 SM00014 Acid phosphatase homologues B425_RS02465 SM00938 Nitrogen regulatory protein P-II B425_RS02495 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS02550 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS02550 SM01134 B425_RS02550 B425_RS02560 SM00487 DEAD-like helicases superfamily B425_RS02560 SM00490 helicase superfamily c-terminal domain B425_RS02590 SM00984 UDP binding domain B425_RS02625 SM00860 SMI1 / KNR4 family B425_RS02650 SM00344 helix_turn_helix ASNC type B425_RS02665 SM00903 Flavin reductase like domain B425_RS02715 SM00287 Bacterial SH3 domain homologues B425_RS02730 SM00382 ATPases associated with a variety of cellular activities B425_RS02745 SM00354 helix_turn _helix lactose operon repressor B425_RS02780 SM00854 Bacterial capsule synthesis protein PGA_cap B425_RS02835 SM00047 Lysozyme subfamily 2 B425_RS02835 SM00287 Bacterial SH3 domain homologues B425_RS02870 SM00382 ATPases associated with a variety of cellular activities B425_RS02900 SM00646 B425_RS02900 B425_RS02920 SM00984 UDP binding domain B425_RS02960 SM00387 Histidine kinase-like ATPases B425_RS02965 SM00421 helix_turn_helix, Lux Regulon B425_RS02965 SM00448 cheY-homologous receiver domain B425_RS02975 SM00487 DEAD-like helicases superfamily B425_RS02975 SM00490 helicase superfamily c-terminal domain B425_RS03060 SM00957 SecA DEAD-like domain B425_RS03060 SM00958 SecA preprotein cross-linking domain B425_RS03065 SM00937 B425_RS03065 B425_RS03080 SM00382 ATPases associated with a variety of cellular activities B425_RS03090 SM00710 Parallel beta-helix repeats B425_RS03090 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses B425_RS03095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS03095 SM00245 tail specific protease B425_RS03105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS03140 SM00487 DEAD-like helicases superfamily B425_RS03140 SM00490 helicase superfamily c-terminal domain B425_RS03145 SM00382 ATPases associated with a variety of cellular activities B425_RS03185 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS03185 SM00866 B425_RS03185 B425_RS03265 SM00382 ATPases associated with a variety of cellular activities B425_RS03270 SM00448 cheY-homologous receiver domain B425_RS03270 SM00862 Transcriptional regulatory protein, C terminal B425_RS03275 SM00387 Histidine kinase-like ATPases B425_RS03275 SM00388 His Kinase A (phosphoacceptor) domain B425_RS03280 SM00028 Tetratricopeptide repeats B425_RS03340 SM00947 Carbonic anhydrase B425_RS03385 SM00354 helix_turn _helix lactose operon repressor B425_RS03395 SM00640 Glycosyl hydrolases family 32 B425_RS03450 SM00849 Metallo-beta-lactamase superfamily B425_RS03475 SM00530 Helix-turn-helix XRE-family like proteins B425_RS03570 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS03570 SM00895 B425_RS03570 B425_RS03630 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS03645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B425_RS03670 SM01192 B425_RS03670 B425_RS03670 SM01193 B425_RS03670 B425_RS03680 SM00984 UDP binding domain B425_RS03750 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS03750 SM00382 ATPases associated with a variety of cellular activities B425_RS03775 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS03775 SM00382 ATPases associated with a variety of cellular activities B425_RS03795 SM00382 ATPases associated with a variety of cellular activities B425_RS03810 SM00448 cheY-homologous receiver domain B425_RS03810 SM00862 Transcriptional regulatory protein, C terminal B425_RS03815 SM00387 Histidine kinase-like ATPases B425_RS03815 SM00388 His Kinase A (phosphoacceptor) domain B425_RS03825 SM00530 Helix-turn-helix XRE-family like proteins B425_RS03830 SM00530 Helix-turn-helix XRE-family like proteins B425_RS03835 SM00530 Helix-turn-helix XRE-family like proteins B425_RS03850 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS03850 SM00357 Cold shock protein domain B425_RS03850 SM00955 B425_RS03850 B425_RS03885 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS03890 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS03905 SM00382 ATPases associated with a variety of cellular activities B425_RS04015 SM00382 ATPases associated with a variety of cellular activities B425_RS04025 SM00421 helix_turn_helix, Lux Regulon B425_RS04025 SM00448 cheY-homologous receiver domain B425_RS04090 SM00382 ATPases associated with a variety of cellular activities B425_RS04100 SM00835 Cupin B425_RS04115 SM00448 cheY-homologous receiver domain B425_RS04115 SM00862 Transcriptional regulatory protein, C terminal B425_RS04120 SM00387 Histidine kinase-like ATPases B425_RS04120 SM00388 His Kinase A (phosphoacceptor) domain B425_RS04145 SM00382 ATPases associated with a variety of cellular activities B425_RS04180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS04180 SM00387 Histidine kinase-like ATPases B425_RS04185 SM00421 helix_turn_helix, Lux Regulon B425_RS04185 SM00448 cheY-homologous receiver domain B425_RS04220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS04220 SM00387 Histidine kinase-like ATPases B425_RS04220 SM00388 His Kinase A (phosphoacceptor) domain B425_RS04225 SM00448 cheY-homologous receiver domain B425_RS04225 SM00862 Transcriptional regulatory protein, C terminal B425_RS04230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS04240 SM00822 B425_RS04240 B425_RS04255 SM00382 ATPases associated with a variety of cellular activities B425_RS04270 SM00530 Helix-turn-helix XRE-family like proteins B425_RS04285 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS04285 SM00529 Helix-turn-helix diphteria tox regulatory element B425_RS04350 SM00382 ATPases associated with a variety of cellular activities B425_RS04350 SM00930 B425_RS04350 B425_RS04375 SM00382 ATPases associated with a variety of cellular activities B425_RS04420 SM00465 GIY-YIG type nucleases (URI domain) B425_RS04435 SM00752 Horizontally Transferred TransMembrane Domain B425_RS04445 SM00422 helix_turn_helix, mercury resistance B425_RS04475 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS04475 SM00866 B425_RS04475 B425_RS04480 SM00382 ATPases associated with a variety of cellular activities B425_RS04555 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS04665 SM00382 ATPases associated with a variety of cellular activities B425_RS04680 SM01240 B425_RS04680 B425_RS04760 SM00823 Phosphopantetheine attachment site B425_RS04760 SM00824 Thioesterase B425_RS04765 SM00923 MbtH-like protein B425_RS04775 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B425_RS04775 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B425_RS04820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS04860 SM00052 Putative diguanylate phosphodiesterase B425_RS04890 SM00421 helix_turn_helix, Lux Regulon B425_RS04890 SM00448 cheY-homologous receiver domain B425_RS04950 SM00382 ATPases associated with a variety of cellular activities B425_RS04960 SM00448 cheY-homologous receiver domain B425_RS04965 SM00091 PAS domain B425_RS04965 SM00387 Histidine kinase-like ATPases B425_RS04990 SM00479 B425_RS04990 B425_RS04995 SM01298 B425_RS04995 B425_RS05020 SM00344 helix_turn_helix ASNC type B425_RS05030 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS05085 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS05085 SM01091 Transporter associated domain B425_RS05090 SM00642 Alpha-amylase domain B425_RS05110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS05110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS05110 SM00319 Homologues of the ligand binding domain of Tar B425_RS05115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS05115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS05115 SM00319 Homologues of the ligand binding domain of Tar B425_RS05120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS05120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS05120 SM00319 Homologues of the ligand binding domain of Tar B425_RS05125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS05125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS05125 SM00319 Homologues of the ligand binding domain of Tar B425_RS05160 SM00028 Tetratricopeptide repeats B425_RS05185 SM00047 Lysozyme subfamily 2 B425_RS05230 SM00244 prohibitin homologues B425_RS05245 SM01251 B425_RS05245 B425_RS05260 SM00646 B425_RS05260 B425_RS05295 SM00382 ATPases associated with a variety of cellular activities B425_RS05300 SM00382 ATPases associated with a variety of cellular activities B425_RS05310 SM00662 RNA polymerases D B425_RS05330 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS05390 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B425_RS05395 SM01374 B425_RS05395 B425_RS05415 SM00322 K homology RNA-binding domain B425_RS05430 SM01382 B425_RS05430 B425_RS05430 SM01383 B425_RS05430 B425_RS05450 SM01403 B425_RS05450 B425_RS05465 SM00838 Elongation factor G C-terminus B425_RS05465 SM00889 Elongation factor G, domain IV B425_RS05485 SM00663 RNA polymerase I subunit A N-terminus B425_RS05515 SM00649 Ribosomal protein L11/L12 B425_RS05520 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B425_RS05520 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B425_RS05545 SM00967 RNA 2'-O ribose methyltransferase substrate binding B425_RS05550 SM00535 Ribonuclease III family B425_RS05555 SM00840 B425_RS05555 B425_RS05580 SM00670 Large family of predicted nucleotide-binding domains B425_RS05590 SM00382 ATPases associated with a variety of cellular activities B425_RS05595 SM00382 ATPases associated with a variety of cellular activities B425_RS05595 SM01086 C-terminal, D2-small domain, of ClpB protein B425_RS05620 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS05620 SM01240 B425_RS05620 B425_RS05625 SM00936 Penicillin-binding protein 5, C-terminal domain B425_RS05665 SM00257 Lysin motif B425_RS05665 SM00636 B425_RS05665 B425_RS05685 SM00382 ATPases associated with a variety of cellular activities B425_RS05695 SM00493 B425_RS05695 B425_RS05795 SM00382 ATPases associated with a variety of cellular activities B425_RS05810 SM00530 Helix-turn-helix XRE-family like proteins B425_RS05835 SM00028 Tetratricopeptide repeats B425_RS05855 SM00387 Histidine kinase-like ATPases B425_RS05855 SM00388 His Kinase A (phosphoacceptor) domain B425_RS05860 SM00448 cheY-homologous receiver domain B425_RS05860 SM00862 Transcriptional regulatory protein, C terminal B425_RS05870 SM00354 helix_turn _helix lactose operon repressor B425_RS05900 SM00382 ATPases associated with a variety of cellular activities B425_RS05935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B425_RS05935 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B425_RS05955 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS05970 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS05970 SM01134 B425_RS05970 B425_RS05995 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS06085 SM00155 Phospholipase D. Active site motifs. B425_RS06140 SM00857 Resolvase, N terminal domain B425_RS06160 SM00387 Histidine kinase-like ATPases B425_RS06165 SM00448 cheY-homologous receiver domain B425_RS06180 SM00849 Metallo-beta-lactamase superfamily B425_RS06250 SM00642 Alpha-amylase domain B425_RS06255 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS06255 SM00866 B425_RS06255 B425_RS06285 SM00354 helix_turn _helix lactose operon repressor B425_RS06310 SM00226 Low molecular weight phosphatase family B425_RS06380 SM00478 endonuclease III B425_RS06400 SM00382 ATPases associated with a variety of cellular activities B425_RS06405 SM00220 Serine/Threonine protein kinases, catalytic domain B425_RS06405 SM01260 B425_RS06405 B425_RS06415 SM00823 Phosphopantetheine attachment site B425_RS06420 SM00823 Phosphopantetheine attachment site B425_RS06435 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B425_RS06475 SM00833 Cobalamin synthesis protein cobW C-terminal domain B425_RS06590 SM00829 Enoylreductase B425_RS06625 SM00342 helix_turn_helix, arabinose operon control protein B425_RS06755 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS06775 SM00421 helix_turn_helix, Lux Regulon B425_RS06775 SM00448 cheY-homologous receiver domain B425_RS06780 SM00382 ATPases associated with a variety of cellular activities B425_RS06855 SM00530 Helix-turn-helix XRE-family like proteins B425_RS06890 SM00450 Rhodanese Homology Domain B425_RS06925 SM00387 Histidine kinase-like ATPases B425_RS06930 SM00448 cheY-homologous receiver domain B425_RS07060 SM00028 Tetratricopeptide repeats B425_RS07070 SM00642 Alpha-amylase domain B425_RS07090 SM00382 ATPases associated with a variety of cellular activities B425_RS07140 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS07140 SM00382 ATPases associated with a variety of cellular activities B425_RS07185 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS07205 SM00530 Helix-turn-helix XRE-family like proteins B425_RS07215 SM00905 Dihydroneopterin aldolase B425_RS07260 SM00382 ATPases associated with a variety of cellular activities B425_RS07270 SM00977 TilS substrate C-terminal domain B425_RS07275 SM00220 Serine/Threonine protein kinases, catalytic domain B425_RS07285 SM00331 Sigma factor PP2C-like phosphatases B425_RS07285 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B425_RS07300 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS07320 SM00363 S4 RNA-binding domain B425_RS07335 SM00966 SpoVT / AbrB like domain B425_RS07340 SM00487 DEAD-like helicases superfamily B425_RS07340 SM00490 helicase superfamily c-terminal domain B425_RS07340 SM00982 B425_RS07340 B425_RS07340 SM01058 CarD-like/TRCF domain B425_RS07360 SM01400 B425_RS07360 B425_RS07405 SM00650 Ribosomal RNA adenine dimethylases B425_RS07410 SM00493 B425_RS07410 B425_RS07415 SM01208 B425_RS07415 B425_RS07430 SM00966 SpoVT / AbrB like domain B425_RS07440 SM00465 GIY-YIG type nucleases (URI domain) B425_RS07520 SM00883 Chaperonin 10 Kd subunit B425_RS07545 SM00881 CoA binding domain B425_RS07625 SM00382 ATPases associated with a variety of cellular activities B425_RS07655 SM00478 endonuclease III B425_RS07655 SM00525 B425_RS07655 B425_RS07685 SM00287 Bacterial SH3 domain homologues B425_RS07750 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS07800 SM00382 ATPases associated with a variety of cellular activities B425_RS07805 SM00382 ATPases associated with a variety of cellular activities B425_RS07850 SM00861 Transketolase, pyrimidine binding domain B425_RS07955 SM00813 Alpha-L-arabinofuranosidase C-terminus B425_RS07985 SM00967 RNA 2'-O ribose methyltransferase substrate binding B425_RS07995 SM00873 B3/4 domain B425_RS07995 SM00874 tRNA synthetase B5 domain B425_RS07995 SM00896 Ferredoxin-fold anticodon binding domain B425_RS08015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B425_RS08015 SM00481 DNA polymerase alpha chain like domain B425_RS08015 SM00483 DNA polymerase X family B425_RS08020 SM00463 Small MutS-related domain B425_RS08020 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B425_RS08020 SM00534 ATPase domain of DNA mismatch repair MUTS family B425_RS08050 SM00893 Electron transfer flavoprotein domain B425_RS08055 SM00893 Electron transfer flavoprotein domain B425_RS08060 SM00813 Alpha-L-arabinofuranosidase C-terminus B425_RS08070 SM00465 GIY-YIG type nucleases (URI domain) B425_RS08105 SM00421 helix_turn_helix, Lux Regulon B425_RS08110 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS08120 SM00909 Sporulation and spore germination B425_RS08175 SM00917 LeuA allosteric (dimerisation) domain B425_RS08180 SM01329 B425_RS08180 B425_RS08205 SM00382 ATPases associated with a variety of cellular activities B425_RS08205 SM00994 ClpX C4-type zinc finger B425_RS08205 SM01086 C-terminal, D2-small domain, of ClpB protein B425_RS08210 SM00382 ATPases associated with a variety of cellular activities B425_RS08215 SM00382 ATPases associated with a variety of cellular activities B425_RS08215 SM00464 Found in ATP-dependent protease La (LON) B425_RS08250 SM01004 Delta-aminolevulinic acid dehydratase B425_RS08260 SM00257 Lysin motif B425_RS08355 SM01317 B425_RS08355 B425_RS08400 SM00257 Lysin motif B425_RS08415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B425_RS08420 SM00382 ATPases associated with a variety of cellular activities B425_RS08440 SM01323 B425_RS08440 B425_RS08490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS08490 SM00954 Region found in RelA / SpoT proteins B425_RS08500 SM00287 Bacterial SH3 domain homologues B425_RS08500 SM00646 B425_RS08500 B425_RS08530 SM00382 ATPases associated with a variety of cellular activities B425_RS08550 SM00028 Tetratricopeptide repeats B425_RS08555 SM00382 ATPases associated with a variety of cellular activities B425_RS08580 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS08580 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B425_RS08585 SM00382 ATPases associated with a variety of cellular activities B425_RS08595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B425_RS08605 SM00732 Likely ribonuclease with RNase H fold. B425_RS08690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B425_RS08690 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B425_RS08740 SM00849 Metallo-beta-lactamase superfamily B425_RS08825 SM00422 helix_turn_helix, mercury resistance B425_RS08855 SM00860 SMI1 / KNR4 family B425_RS08985 SM00530 Helix-turn-helix XRE-family like proteins B425_RS08990 SM00530 Helix-turn-helix XRE-family like proteins B425_RS08995 SM00530 Helix-turn-helix XRE-family like proteins B425_RS09025 SM00382 ATPases associated with a variety of cellular activities B425_RS09140 SM00507 HNH nucleases B425_RS09155 SM00257 Lysin motif B425_RS09215 SM00644 B425_RS09215 B425_RS09230 SM00860 SMI1 / KNR4 family B425_RS09260 SM00857 Resolvase, N terminal domain B425_RS09315 SM01103 B425_RS09315 B425_RS09325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS09345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B425_RS09355 SM00849 Metallo-beta-lactamase superfamily B425_RS09385 SM00838 Elongation factor G C-terminus B425_RS09390 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS09410 SM00271 DnaJ molecular chaperone homology domain B425_RS09425 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS09475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS09515 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS09530 SM00400 zinc finger B425_RS09530 SM00493 B425_RS09530 B425_RS09565 SM00487 DEAD-like helicases superfamily B425_RS09565 SM00490 helicase superfamily c-terminal domain B425_RS09570 SM00518 AP endonuclease family 2 B425_RS09605 SM00257 Lysin motif B425_RS09650 SM00382 ATPases associated with a variety of cellular activities B425_RS09655 SM00382 ATPases associated with a variety of cellular activities B425_RS09690 SM00631 B425_RS09690 B425_RS09705 SM00849 Metallo-beta-lactamase superfamily B425_RS09730 SM01091 Transporter associated domain B425_RS09740 SM00382 ATPases associated with a variety of cellular activities B425_RS09815 SM00487 DEAD-like helicases superfamily B425_RS09815 SM00490 helicase superfamily c-terminal domain B425_RS09835 SM00450 Rhodanese Homology Domain B425_RS09845 SM00529 Helix-turn-helix diphteria tox regulatory element B425_RS09875 SM00841 Elongation factor P, C-terminal B425_RS09875 SM01185 B425_RS09875 B425_RS09885 SM00382 ATPases associated with a variety of cellular activities B425_RS09930 SM00878 Biotin carboxylase C-terminal domain B425_RS09965 SM00861 Transketolase, pyrimidine binding domain B425_RS09970 SM00363 S4 RNA-binding domain B425_RS09985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS09990 SM00448 cheY-homologous receiver domain B425_RS09995 SM01005 Alanine racemase, C-terminal domain B425_RS10015 SM00530 Helix-turn-helix XRE-family like proteins B425_RS10030 SM00646 B425_RS10030 B425_RS10075 SM00091 PAS domain B425_RS10075 SM00382 ATPases associated with a variety of cellular activities B425_RS10085 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B425_RS10105 SM00861 Transketolase, pyrimidine binding domain B425_RS10115 SM00046 Diacylglycerol kinase catalytic domain (presumed) B425_RS10125 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS10125 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B425_RS10135 SM00382 ATPases associated with a variety of cellular activities B425_RS10180 SM01350 B425_RS10180 B425_RS10230 SM00849 Metallo-beta-lactamase superfamily B425_RS10320 SM00530 Helix-turn-helix XRE-family like proteins B425_RS10325 SM00870 B425_RS10325 B425_RS10340 SM00919 Malic enzyme, NAD binding domain B425_RS10340 SM01274 B425_RS10340 B425_RS10385 SM00936 Penicillin-binding protein 5, C-terminal domain B425_RS10395 SM00387 Histidine kinase-like ATPases B425_RS10530 SM00363 S4 RNA-binding domain B425_RS10550 SM00448 cheY-homologous receiver domain B425_RS10550 SM00862 Transcriptional regulatory protein, C terminal B425_RS10555 SM00091 PAS domain B425_RS10555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS10555 SM00387 Histidine kinase-like ATPases B425_RS10555 SM00388 His Kinase A (phosphoacceptor) domain B425_RS10590 SM00487 DEAD-like helicases superfamily B425_RS10590 SM00490 helicase superfamily c-terminal domain B425_RS10600 SM00257 Lysin motif B425_RS10620 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B425_RS10655 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS10695 SM00411 bacterial (prokaryotic) histone like domain B425_RS10725 SM00562 B425_RS10725 B425_RS10730 SM00138 Methyltransferase, chemotaxis proteins B425_RS10795 SM00028 Tetratricopeptide repeats B425_RS10800 SM00914 B425_RS10800 B425_RS10835 SM00835 Cupin B425_RS10855 SM00851 MGS-like domain B425_RS10895 SM00479 B425_RS10895 B425_RS10895 SM00487 DEAD-like helicases superfamily B425_RS10895 SM00491 B425_RS10895 B425_RS10920 SM00478 endonuclease III B425_RS10920 SM00525 B425_RS10920 B425_RS10930 SM00060 Fibronectin type 3 domain B425_RS10980 SM00487 DEAD-like helicases superfamily B425_RS10980 SM00490 helicase superfamily c-terminal domain B425_RS11005 SM00981 B425_RS11005 B425_RS11020 SM00491 B425_RS11020 B425_RS11075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B425_RS11075 SM00475 5'-3' exonuclease B425_RS11115 SM00357 Cold shock protein domain B425_RS11135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS11140 SM00567 E-Z type HEAT repeats B425_RS11140 SM00932 Scaffold protein Nfu/NifU N terminal B425_RS11215 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS11235 SM00857 Resolvase, N terminal domain B425_RS11300 SM00871 Bacterial transcription activator, effector binding domain B425_RS11315 SM00882 Coenzyme A transferase B425_RS11320 SM00882 Coenzyme A transferase B425_RS11360 SM00014 Acid phosphatase homologues B425_RS11390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS11390 SM00245 tail specific protease B425_RS11395 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS11395 SM00866 B425_RS11395 B425_RS11500 SM00257 Lysin motif B425_RS11510 SM00382 ATPases associated with a variety of cellular activities B425_RS11515 SM00327 von Willebrand factor (vWF) type A domain B425_RS11520 SM00861 Transketolase, pyrimidine binding domain B425_RS11530 SM00849 Metallo-beta-lactamase superfamily B425_RS11615 SM00341 Helicase and RNase D C-terminal B425_RS11615 SM00487 DEAD-like helicases superfamily B425_RS11615 SM00490 helicase superfamily c-terminal domain B425_RS11615 SM00956 B425_RS11615 B425_RS11620 SM00257 Lysin motif B425_RS11655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS11665 SM00849 Metallo-beta-lactamase superfamily B425_RS11675 SM00342 helix_turn_helix, arabinose operon control protein B425_RS11695 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS11710 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B425_RS11765 SM00530 Helix-turn-helix XRE-family like proteins B425_RS11910 SM00710 Parallel beta-helix repeats B425_RS11965 SM00481 DNA polymerase alpha chain like domain B425_RS12080 SM00507 HNH nucleases B425_RS12090 SM00497 Intron encoded nuclease repeat motif B425_RS12130 SM00496 Intron-encoded nuclease repeat 2 B425_RS12215 SM00859 Semialdehyde dehydrogenase, NAD binding domain B425_RS12225 SM01130 B425_RS12225 B425_RS12230 SM00849 Metallo-beta-lactamase superfamily B425_RS12245 SM00382 ATPases associated with a variety of cellular activities B425_RS12245 SM00843 B425_RS12245 B425_RS12250 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS12250 SM00866 B425_RS12250 B425_RS12260 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS12295 SM00530 Helix-turn-helix XRE-family like proteins B425_RS12305 SM00852 Probable molybdopterin binding domain B425_RS12310 SM00382 ATPases associated with a variety of cellular activities B425_RS12320 SM00322 K homology RNA-binding domain B425_RS12320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS12335 SM00829 Enoylreductase B425_RS12345 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS12360 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B425_RS12360 SM00534 ATPase domain of DNA mismatch repair MUTS family B425_RS12365 SM00853 MutL C terminal dimerisation domain B425_RS12365 SM01340 B425_RS12365 B425_RS12375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B425_RS12380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B425_RS12385 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B425_RS12410 SM00822 B425_RS12410 B425_RS12410 SM00823 Phosphopantetheine attachment site B425_RS12410 SM00825 Beta-ketoacyl synthase B425_RS12410 SM00826 B425_RS12410 B425_RS12410 SM01294 B425_RS12410 B425_RS12415 SM00822 B425_RS12415 B425_RS12415 SM00823 Phosphopantetheine attachment site B425_RS12415 SM00825 Beta-ketoacyl synthase B425_RS12415 SM00826 B425_RS12415 B425_RS12415 SM01294 B425_RS12415 B425_RS12420 SM00822 B425_RS12420 B425_RS12420 SM00823 Phosphopantetheine attachment site B425_RS12420 SM00825 Beta-ketoacyl synthase B425_RS12420 SM00826 B425_RS12420 B425_RS12420 SM01294 B425_RS12420 B425_RS12425 SM00822 B425_RS12425 B425_RS12425 SM00823 Phosphopantetheine attachment site B425_RS12425 SM00825 Beta-ketoacyl synthase B425_RS12425 SM00826 B425_RS12425 B425_RS12425 SM01294 B425_RS12425 B425_RS12430 SM00823 Phosphopantetheine attachment site B425_RS12430 SM00825 Beta-ketoacyl synthase B425_RS12430 SM01294 B425_RS12430 B425_RS12545 SM00382 ATPases associated with a variety of cellular activities B425_RS12560 SM00422 helix_turn_helix, mercury resistance B425_RS12565 SM01230 B425_RS12565 B425_RS12640 SM00829 Enoylreductase B425_RS12725 SM00257 Lysin motif B425_RS12725 SM00644 B425_RS12725 B425_RS12770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS12795 SM00382 ATPases associated with a variety of cellular activities B425_RS12810 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B425_RS12820 SM00382 ATPases associated with a variety of cellular activities B425_RS12860 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B425_RS12875 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS12895 SM00028 Tetratricopeptide repeats B425_RS12910 SM00100 Cyclic nucleotide-monophosphate binding domain B425_RS12935 SM00382 ATPases associated with a variety of cellular activities B425_RS12945 SM00257 Lysin motif B425_RS12945 SM00636 B425_RS12945 B425_RS12950 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS12950 SM00924 MgtE intracellular N domain B425_RS12955 SM00422 helix_turn_helix, mercury resistance B425_RS12965 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS12980 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen B425_RS12985 SM00052 Putative diguanylate phosphodiesterase B425_RS12985 SM00267 diguanylate cyclase B425_RS13040 SM00091 PAS domain B425_RS13040 SM00387 Histidine kinase-like ATPases B425_RS13040 SM00388 His Kinase A (phosphoacceptor) domain B425_RS13080 SM01007 Class II Aldolase and Adducin N-terminal domain B425_RS13095 SM00387 Histidine kinase-like ATPases B425_RS13095 SM00388 His Kinase A (phosphoacceptor) domain B425_RS13100 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS13115 SM00382 ATPases associated with a variety of cellular activities B425_RS13115 SM01086 C-terminal, D2-small domain, of ClpB protein B425_RS13190 SM00354 helix_turn _helix lactose operon repressor B425_RS13195 SM01061 CAT RNA binding domain B425_RS13225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS13225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS13250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B425_RS13250 SM00091 PAS domain B425_RS13250 SM00387 Histidine kinase-like ATPases B425_RS13250 SM00388 His Kinase A (phosphoacceptor) domain B425_RS13260 SM00260 Two component signalling adaptor domain B425_RS13260 SM00448 cheY-homologous receiver domain B425_RS13275 SM00257 Lysin motif B425_RS13295 SM00052 Putative diguanylate phosphodiesterase B425_RS13390 SM00852 Probable molybdopterin binding domain B425_RS13420 SM00382 ATPases associated with a variety of cellular activities B425_RS13430 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS13430 SM01134 B425_RS13430 B425_RS13455 SM00382 ATPases associated with a variety of cellular activities B425_RS13475 SM00966 SpoVT / AbrB like domain B425_RS13480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B425_RS13480 SM00091 PAS domain B425_RS13480 SM00387 Histidine kinase-like ATPases B425_RS13480 SM00388 His Kinase A (phosphoacceptor) domain B425_RS13500 SM00849 Metallo-beta-lactamase superfamily B425_RS13535 SM00861 Transketolase, pyrimidine binding domain B425_RS13615 SM00838 Elongation factor G C-terminus B425_RS13635 SM00670 Large family of predicted nucleotide-binding domains B425_RS13660 SM00878 Biotin carboxylase C-terminal domain B425_RS13705 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS13805 SM00740 B425_RS13805 B425_RS13810 SM00740 B425_RS13810 B425_RS13850 SM00842 Cell division protein FtsA B425_RS13855 SM00864 Tubulin/FtsZ family, GTPase domain B425_RS13855 SM00865 Tubulin/FtsZ family, C-terminal domain B425_RS13880 SM00382 ATPases associated with a variety of cellular activities B425_RS13915 SM00363 S4 RNA-binding domain B425_RS13945 SM00363 S4 RNA-binding domain B425_RS13970 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B425_RS13975 SM00851 MGS-like domain B425_RS13975 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B425_RS13990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B425_RS14035 SM00642 Alpha-amylase domain B425_RS14045 SM00831 Cation transporter/ATPase, N-terminus B425_RS14060 SM00072 Guanylate kinase homologues. B425_RS14065 SM01409 B425_RS14065 B425_RS14075 SM00487 DEAD-like helicases superfamily B425_RS14075 SM00490 helicase superfamily c-terminal domain B425_RS14100 SM00331 Sigma factor PP2C-like phosphatases B425_RS14100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B425_RS14105 SM00220 Serine/Threonine protein kinases, catalytic domain B425_RS14105 SM00740 B425_RS14105 B425_RS14120 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain B425_RS14140 SM01120 B425_RS14140 B425_RS14140 SM01121 B425_RS14140 B425_RS14155 SM00487 DEAD-like helicases superfamily B425_RS14155 SM00490 helicase superfamily c-terminal domain B425_RS14170 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B425_RS14175 SM00822 B425_RS14175 B425_RS14185 SM00358 Double-stranded RNA binding motif B425_RS14185 SM00535 Ribonuclease III family B425_RS14190 SM00968 SMC proteins Flexible Hinge Domain B425_RS14195 SM00382 ATPases associated with a variety of cellular activities B425_RS14195 SM00962 SRP54-type protein, GTPase domain B425_RS14195 SM00963 SRP54-type protein, helical bundle domain B425_RS14205 SM00382 ATPases associated with a variety of cellular activities B425_RS14205 SM00962 SRP54-type protein, GTPase domain B425_RS14205 SM00963 SRP54-type protein, helical bundle domain B425_RS14265 SM00881 CoA binding domain B425_RS14275 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B425_RS14275 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B425_RS14275 SM00493 B425_RS14275 B425_RS14295 SM00382 ATPases associated with a variety of cellular activities B425_RS14295 SM01086 C-terminal, D2-small domain, of ClpB protein B425_RS14335 SM00382 ATPases associated with a variety of cellular activities B425_RS14385 SM00448 cheY-homologous receiver domain B425_RS14420 SM00962 SRP54-type protein, GTPase domain B425_RS14430 SM00448 cheY-homologous receiver domain B425_RS14435 SM00073 Histidine Phosphotransfer domain B425_RS14435 SM00260 Two component signalling adaptor domain B425_RS14435 SM00387 Histidine kinase-like ATPases B425_RS14435 SM01231 B425_RS14435 B425_RS14440 SM00260 Two component signalling adaptor domain B425_RS14500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS14510 SM00479 B425_RS14510 B425_RS14510 SM00481 DNA polymerase alpha chain like domain B425_RS14520 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS14520 SM00322 K homology RNA-binding domain B425_RS14555 SM00904 Riboflavin kinase B425_RS14560 SM01387 B425_RS14560 B425_RS14565 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS14565 SM00322 K homology RNA-binding domain B425_RS14595 SM00857 Resolvase, N terminal domain B425_RS14600 SM00318 Staphylococcal nuclease homologues B425_RS14600 SM00894 Excalibur calcium-binding domain B425_RS14605 SM00860 SMI1 / KNR4 family B425_RS14620 SM00860 SMI1 / KNR4 family B425_RS14675 SM00644 B425_RS14675 B425_RS14680 SM00710 Parallel beta-helix repeats B425_RS14840 SM00448 cheY-homologous receiver domain B425_RS14845 SM00387 Histidine kinase-like ATPases B425_RS14845 SM00388 His Kinase A (phosphoacceptor) domain B425_RS14845 SM00448 cheY-homologous receiver domain B425_RS14890 SM00656 B425_RS14890 B425_RS14910 SM00487 DEAD-like helicases superfamily B425_RS14910 SM00490 helicase superfamily c-terminal domain B425_RS14915 SM00382 ATPases associated with a variety of cellular activities B425_RS14925 SM00422 helix_turn_helix, mercury resistance B425_RS14930 SM00382 ATPases associated with a variety of cellular activities B425_RS14945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS15015 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS15120 SM00382 ATPases associated with a variety of cellular activities B425_RS15125 SM00382 ATPases associated with a variety of cellular activities B425_RS15135 SM00046 Diacylglycerol kinase catalytic domain (presumed) B425_RS15150 SM00845 GatB domain B425_RS15185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B425_RS15185 SM00292 breast cancer carboxy-terminal domain B425_RS15185 SM00532 Ligase N family B425_RS15235 SM00344 helix_turn_helix ASNC type B425_RS15240 SM01209 B425_RS15240 B425_RS15240 SM01210 B425_RS15240 B425_RS15245 SM00798 AICARFT/IMPCHase bienzyme B425_RS15245 SM00851 MGS-like domain B425_RS15270 SM01211 B425_RS15270 B425_RS15285 SM00998 Adenylosuccinate lyase C-terminus B425_RS15295 SM01001 AIR carboxylase B425_RS15335 SM00460 Transglutaminase/protease-like homologues B425_RS15385 SM00829 Enoylreductase B425_RS15440 SM00829 Enoylreductase B425_RS15445 SM00028 Tetratricopeptide repeats B425_RS15445 SM00382 ATPases associated with a variety of cellular activities B425_RS15475 SM00530 Helix-turn-helix XRE-family like proteins B425_RS15510 SM01007 Class II Aldolase and Adducin N-terminal domain B425_RS15570 SM00448 cheY-homologous receiver domain B425_RS15570 SM00850 LytTr DNA-binding domain B425_RS15575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B425_RS15575 SM00387 Histidine kinase-like ATPases B425_RS15585 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B425_RS15600 SM00382 ATPases associated with a variety of cellular activities B425_RS15620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B425_RS15650 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B425_RS15650 SM01232 B425_RS15650 B425_RS15655 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B425_RS15655 SM00474 3'-5' exonuclease B425_RS15655 SM00475 5'-3' exonuclease B425_RS15655 SM00482 DNA polymerase A domain B425_RS15660 SM00091 PAS domain B425_RS15660 SM00387 Histidine kinase-like ATPases B425_RS15660 SM00388 His Kinase A (phosphoacceptor) domain B425_RS15665 SM00448 cheY-homologous receiver domain B425_RS15665 SM00862 Transcriptional regulatory protein, C terminal B425_RS15675 SM01329 B425_RS15675 B425_RS15725 SM00919 Malic enzyme, NAD binding domain B425_RS15725 SM01274 B425_RS15725 B425_RS15730 SM00481 DNA polymerase alpha chain like domain B425_RS15760 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS15765 SM00849 Metallo-beta-lactamase superfamily B425_RS15785 SM00852 Probable molybdopterin binding domain B425_RS15845 SM00981 B425_RS15845 B425_RS15880 SM00267 diguanylate cyclase B425_RS15885 SM00363 S4 RNA-binding domain B425_RS15885 SM01390 B425_RS15885 B425_RS15935 SM00363 S4 RNA-binding domain B425_RS15950 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS15970 SM00354 helix_turn _helix lactose operon repressor B425_RS15975 SM00830 Chorismate mutase type II B425_RS16000 SM00382 ATPases associated with a variety of cellular activities B425_RS16000 SM00843 B425_RS16000 B425_RS16035 SM00919 Malic enzyme, NAD binding domain B425_RS16035 SM01274 B425_RS16035 B425_RS16040 SM00849 Metallo-beta-lactamase superfamily B425_RS16060 SM00046 Diacylglycerol kinase catalytic domain (presumed) B425_RS16095 SM00382 ATPases associated with a variety of cellular activities B425_RS16100 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS16105 SM00363 S4 RNA-binding domain B425_RS16130 SM00354 helix_turn _helix lactose operon repressor B425_RS16155 SM00450 Rhodanese Homology Domain B425_RS16170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B425_RS16190 SM00382 ATPases associated with a variety of cellular activities B425_RS16195 SM00387 Histidine kinase-like ATPases B425_RS16200 SM00448 cheY-homologous receiver domain B425_RS16200 SM00862 Transcriptional regulatory protein, C terminal B425_RS16210 SM00382 ATPases associated with a variety of cellular activities B425_RS16230 SM00382 ATPases associated with a variety of cellular activities B425_RS16235 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS16250 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS16315 SM00382 ATPases associated with a variety of cellular activities B425_RS16355 SM01234 B425_RS16355 B425_RS16360 SM00947 Carbonic anhydrase B425_RS16380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B425_RS16520 SM00823 Phosphopantetheine attachment site B425_RS16545 SM00382 ATPases associated with a variety of cellular activities B425_RS16555 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS16590 SM00710 Parallel beta-helix repeats B425_RS16625 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS16635 SM00382 ATPases associated with a variety of cellular activities B425_RS16650 SM00382 ATPases associated with a variety of cellular activities B425_RS16660 SM00448 cheY-homologous receiver domain B425_RS16660 SM00862 Transcriptional regulatory protein, C terminal B425_RS16665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS16665 SM00387 Histidine kinase-like ATPases B425_RS16665 SM00388 His Kinase A (phosphoacceptor) domain B425_RS16670 SM00028 Tetratricopeptide repeats B425_RS16700 SM00382 ATPases associated with a variety of cellular activities B425_RS16730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS16735 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS16770 SM00420 helix_turn_helix, Deoxyribose operon repressor B425_RS16820 SM00796 Allophanate hydrolase subunit 1 B425_RS16825 SM00797 Allophanate hydrolase subunit 2 B425_RS16830 SM00346 helix_turn_helix isocitrate lyase regulation B425_RS16900 SM00344 helix_turn_helix ASNC type B425_RS16905 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B425_RS16905 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B425_RS16905 SM00493 B425_RS16905 B425_RS16915 SM00267 diguanylate cyclase B425_RS16950 SM00257 Lysin motif B425_RS16970 SM00028 Tetratricopeptide repeats B425_RS17045 SM00448 cheY-homologous receiver domain B425_RS17060 SM00382 ATPases associated with a variety of cellular activities B425_RS17105 SM00487 DEAD-like helicases superfamily B425_RS17105 SM00490 helicase superfamily c-terminal domain B425_RS17135 SM01005 Alanine racemase, C-terminal domain B425_RS17160 SM00387 Histidine kinase-like ATPases B425_RS17165 SM00331 Sigma factor PP2C-like phosphatases B425_RS17185 SM00331 Sigma factor PP2C-like phosphatases B425_RS17185 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B425_RS17190 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS17190 SM00732 Likely ribonuclease with RNase H fold. B425_RS17195 SM00731 SprT homologues. B425_RS17235 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS17260 SM00357 Cold shock protein domain B425_RS17280 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17330 SM00342 helix_turn_helix, arabinose operon control protein B425_RS17330 SM00871 Bacterial transcription activator, effector binding domain B425_RS17355 SM00829 Enoylreductase B425_RS17360 SM00422 helix_turn_helix, mercury resistance B425_RS17370 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17395 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17435 SM00382 ATPases associated with a variety of cellular activities B425_RS17460 SM00825 Beta-ketoacyl synthase B425_RS17465 SM00530 Helix-turn-helix XRE-family like proteins B425_RS17480 SM00422 helix_turn_helix, mercury resistance B425_RS17500 SM01329 B425_RS17500 B425_RS17505 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17505 SM00895 B425_RS17505 B425_RS17535 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17535 SM00866 B425_RS17535 B425_RS17540 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS17540 SM00895 B425_RS17540 B425_RS17580 SM00829 Enoylreductase B425_RS17725 SM00530 Helix-turn-helix XRE-family like proteins B425_RS17730 SM00530 Helix-turn-helix XRE-family like proteins B425_RS17825 SM00843 B425_RS17825 B425_RS17915 SM00710 Parallel beta-helix repeats B425_RS17940 SM00644 B425_RS17940 B425_RS18000 SM00382 ATPases associated with a variety of cellular activities B425_RS18005 SM00382 ATPases associated with a variety of cellular activities B425_RS18020 SM00382 ATPases associated with a variety of cellular activities B425_RS18025 SM00062 Bacterial periplasmic substrate-binding proteins B425_RS18055 SM00530 Helix-turn-helix XRE-family like proteins B425_RS18070 SM00567 E-Z type HEAT repeats B425_RS18100 SM00763 PrkA AAA domain B425_RS18140 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS18145 SM00382 ATPases associated with a variety of cellular activities B425_RS18150 SM00382 ATPases associated with a variety of cellular activities B425_RS18160 SM00357 Cold shock protein domain B425_RS18170 SM00267 diguanylate cyclase B425_RS18225 SM00116 Domain in cystathionine beta-synthase and other proteins. B425_RS18270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B425_RS18270 SM00387 Histidine kinase-like ATPases B425_RS18275 SM00421 helix_turn_helix, Lux Regulon B425_RS18275 SM00448 cheY-homologous receiver domain B425_RS18295 SM00257 Lysin motif B425_RS18315 SM00098 Alkaline phosphatase homologues B425_RS18320 SM00257 Lysin motif B425_RS18365 SM00563 Phosphate acyltransferases B425_RS18370 SM01091 Transporter associated domain B425_RS18375 SM00422 helix_turn_helix, mercury resistance B425_RS18385 SM00825 Beta-ketoacyl synthase B425_RS18390 SM01091 Transporter associated domain B425_RS18445 SM00382 ATPases associated with a variety of cellular activities B425_RS18450 SM00382 ATPases associated with a variety of cellular activities B425_RS18500 SM00729 Elongator protein 3, MiaB family, Radical SAM B425_RS18535 SM00382 ATPases associated with a variety of cellular activities B425_RS18555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B425_RS18590 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS18620 SM00382 ATPases associated with a variety of cellular activities B425_RS18700 SM00849 Metallo-beta-lactamase superfamily B425_RS18740 SM00855 Phosphoglycerate mutase family B425_RS18760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B425_RS18775 SM00914 B425_RS18775 B425_RS18800 SM00894 Excalibur calcium-binding domain B425_RS18840 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS18960 SM00342 helix_turn_helix, arabinose operon control protein B425_RS18965 SM00354 helix_turn _helix lactose operon repressor B425_RS18985 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS19010 SM00316 Ribosomal protein S1-like RNA-binding domain B425_RS19080 SM00859 Semialdehyde dehydrogenase, NAD binding domain B425_RS19100 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B425_RS19105 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B425_RS19105 SM01209 B425_RS19105 B425_RS19155 SM00825 Beta-ketoacyl synthase B425_RS19165 SM00382 ATPases associated with a variety of cellular activities B425_RS19170 SM00382 ATPases associated with a variety of cellular activities B425_RS19215 SM00382 ATPases associated with a variety of cellular activities B425_RS19220 SM00382 ATPases associated with a variety of cellular activities B425_RS19275 SM01118 B425_RS19275 B425_RS19285 SM00954 Region found in RelA / SpoT proteins B425_RS19410 SM00849 Metallo-beta-lactamase superfamily B425_RS19420 SM00382 ATPases associated with a variety of cellular activities B425_RS19425 SM00966 SpoVT / AbrB like domain B425_RS19475 SM00860 SMI1 / KNR4 family B425_RS19510 SM01092 CO dehydrogenase flavoprotein C-terminal domain B425_RS19515 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B425_RS19580 SM00028 Tetratricopeptide repeats B425_RS19605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B425_RS19610 SM00382 ATPases associated with a variety of cellular activities B425_RS19625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS19625 SM00387 Histidine kinase-like ATPases B425_RS19625 SM00388 His Kinase A (phosphoacceptor) domain B425_RS19630 SM00448 cheY-homologous receiver domain B425_RS19630 SM00862 Transcriptional regulatory protein, C terminal B425_RS19640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B425_RS19645 SM00849 Metallo-beta-lactamase superfamily B425_RS19660 SM00091 PAS domain B425_RS19660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B425_RS19660 SM00387 Histidine kinase-like ATPases B425_RS19660 SM00388 His Kinase A (phosphoacceptor) domain B425_RS19665 SM00448 cheY-homologous receiver domain B425_RS19665 SM00862 Transcriptional regulatory protein, C terminal B425_RS19695 SM00788 Adenylosuccinate synthetase B425_RS19705 SM00382 ATPases associated with a variety of cellular activities B425_RS19755 SM00267 diguanylate cyclase B425_RS19775 SM01131 B425_RS19775 B425_RS19790 SM00640 Glycosyl hydrolases family 32 B425_RS19795 SM00345 helix_turn_helix gluconate operon transcriptional repressor B425_RS19795 SM00895 B425_RS19795 B425_RS19825 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS19835 SM00347 helix_turn_helix multiple antibiotic resistance protein B425_RS19850 SM00857 Resolvase, N terminal domain B425_RS19855 SM00028 Tetratricopeptide repeats B425_RS19955 SM00530 Helix-turn-helix XRE-family like proteins B425_RS19995 SM00354 helix_turn _helix lactose operon repressor B425_RS20010 SM00342 helix_turn_helix, arabinose operon control protein B425_RS20035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B425_RS20060 SM00470 ParB-like nuclease domain B425_RS20070 SM00470 ParB-like nuclease domain B425_RS20080 SM01228 B425_RS20080 B425_RS20090 SM00393 Putative single-stranded nucleic acids-binding domain B425_RS20090 SM01245 B425_RS20090 B425_RS20105 SM00382 ATPases associated with a variety of cellular activities B425_RS20105 SM00760 Bacterial dnaA protein helix-turn-helix domain B425_RS20110 SM00480 DNA polymerase III beta subunit B425_RS20130 SM00387 Histidine kinase-like ATPases B425_RS20130 SM00433 TopoisomeraseII B425_RS20135 SM00434 DNA Topoisomerase IV B425_RS20265 SM00060 Fibronectin type 3 domain B425_RS20630 SM00305 Hint (Hedgehog/Intein) domain C-terminal region B425_RS20745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor