locus-tag	class	description
BAMF_RS20230	COG0592	DNA-directed DNA polymerase activity
BAMF_RS20235	COG2501	S4 domain
BAMF_RS20250	COG0187	DNA topoisomerase II activity
BAMF_RS20255	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMF_RS20290	COG0517	IMP dehydrogenase activity
BAMF_RS20290	COG0516	GMP reductase activity
BAMF_RS20295	COG1686	Belongs to the peptidase S11 family
BAMF_RS20315	COG1929	Belongs to the glycerate kinase type-1 family
BAMF_RS20325	COG1428	Deoxynucleoside kinase
BAMF_RS20330	COG1428	Deoxynucleoside kinase
BAMF_RS20335	COG3858	chitin binding
BAMF_RS20335	COG1388	LysM domain
BAMF_RS20340	COG1335	isochorismatase
BAMF_RS20345	COG0590	tRNA wobble adenosine to inosine editing
BAMF_RS20350	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAMF_RS20355	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BAMF_RS20405	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BAMF_RS20410	COG3853	Toxic anion resistance protein (TelA)
BAMF_RS20415	COG1982	Orn Lys Arg decarboxylase major
BAMF_RS20425	COG3870	Protein conserved in bacteria
BAMF_RS20430	COG1728	Protein conserved in bacteria
BAMF_RS20435	COG0470	DNA polymerase III
BAMF_RS20440	COG1774	PSP1 C-terminal conserved region
BAMF_RS20450	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BAMF_RS20460	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAMF_RS20465	COG2002	toxin-antitoxin pair type II binding
BAMF_RS20470	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMF_RS20470	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMF_RS20475	COG0084	hydrolase, TatD family'
BAMF_RS20480	COG3584	3D domain protein
BAMF_RS20480	COG3583	domain protein
BAMF_RS20485	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAMF_RS20490	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BAMF_RS20500	COG4466	Protein conserved in bacteria
BAMF_RS20515	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAMF_RS20520	COG0251	oxidation-reduction process
BAMF_RS20535	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAMF_RS20555	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAMF_RS20560	COG2002	toxin-antitoxin pair type II binding
BAMF_RS20565	COG2244	polysaccharide biosynthetic process
BAMF_RS20570	COG3956	TIGRFAM MazG family protein
BAMF_RS20575	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BAMF_RS20590	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BAMF_RS20595	COG1098	S1 RNA binding domain
BAMF_RS20610	COG2208	phosphoserine phosphatase activity
BAMF_RS20615	COG2304	oxidoreductase activity
BAMF_RS20620	COG0515	serine threonine protein kinase
BAMF_RS20625	COG0037	tRNA processing
BAMF_RS20630	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BAMF_RS20635	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAMF_RS20650	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMF_RS20655	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMF_RS20660	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAMF_RS20665	COG0512	Glutamine amidotransferase of anthranilate synthase
BAMF_RS20670	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS20675	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BAMF_RS20680	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BAMF_RS20685	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BAMF_RS20690	COG1396	sequence-specific DNA binding
BAMF_RS20695	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMF_RS20700	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BAMF_RS20780	COG4463	regulation of RNA biosynthetic process
BAMF_RS20785	COG3880	PFAM UvrB UvrC protein
BAMF_RS20795	COG0542	response to heat
BAMF_RS20800	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BAMF_RS20805	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BAMF_RS20810	COG4956	integral membrane protein (PIN domain superfamily)
BAMF_RS20830	COG1045	serine acetyltransferase
BAMF_RS20840	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BAMF_RS20845	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMF_RS20850	COG3688	RNA-binding protein containing a PIN domain
BAMF_RS20855	COG1595	DNA-templated transcription, initiation
BAMF_RS20865	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMF_RS20870	COG0250	Participates in transcription elongation, termination and antitermination
BAMF_RS20895	COG2813	Specifically methylates the guanine in position
BAMF_RS20910	COG1358	cellular component organization or biogenesis
BAMF_RS20935	COG0596	Alpha beta hydrolase
BAMF_RS21040	COG0201	protein transport
BAMF_RS21050	COG0024	Methionine aminopeptidase
BAMF_RS21060	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BAMF_RS21085	COG1122	ATPase activity
BAMF_RS21090	COG1122	ATPase activity
BAMF_RS21095	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMF_RS21105	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BAMF_RS21115	COG2226	methyltransferase
BAMF_RS21125	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS21130	COG0489	protein tyrosine kinase activity
BAMF_RS21140	COG2194	sulfuric ester hydrolase activity
BAMF_RS21145	COG0726	polysaccharide deacetylase
BAMF_RS21230	COG0738	Major facilitator superfamily
BAMF_RS21235	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS21250	COG0659	secondary active sulfate transmembrane transporter activity
BAMF_RS21255	COG0385	Bile acid
BAMF_RS21260	COG2819	hydrolase of the alpha beta superfamily
BAMF_RS21265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS21270	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS21275	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMF_RS21280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMF_RS21280	COG2207	Transcriptional regulator
BAMF_RS21285	COG3876	Protein conserved in bacteria
BAMF_RS21290	COG1472	Belongs to the glycosyl hydrolase 3 family
BAMF_RS21295	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMF_RS21300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS21300	COG1263	PTS System
BAMF_RS21310	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMF_RS21315	COG1683	Conserved Protein
BAMF_RS21345	COG1595	DNA-templated transcription, initiation
BAMF_RS21350	COG5662	AntiSigma factor
BAMF_RS21355	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAMF_RS21360	COG4856	YbbR-like protein
BAMF_RS21405	COG1346	cytolysis
BAMF_RS21410	COG1380	Effector of murein hydrolase LrgA
BAMF_RS21415	COG1846	Transcriptional regulator
BAMF_RS21420	COG1113	amino acid transport
BAMF_RS21425	COG1011	Hydrolase
BAMF_RS21430	COG4585	Histidine kinase
BAMF_RS21435	COG2197	response regulator
BAMF_RS21440	COG1131	(ABC) transporter
BAMF_RS21450	COG0842	Transport permease protein
BAMF_RS21450	COG1511	domain protein
BAMF_RS21480	COG0531	amino acid
BAMF_RS21490	COG0584	glycerophosphoryl diester phosphodiesterase
BAMF_RS21495	COG2271	Major facilitator Superfamily
BAMF_RS21505	COG2368	4-hydroxyphenylacetate
BAMF_RS21520	COG0371	Dehydrogenase
BAMF_RS21530	COG1183	phosphatidylcholine synthase activity
BAMF_RS21535	COG0586	Pfam SNARE associated Golgi protein
BAMF_RS21540	COG0688	phosphatidylethanolamine metabolic process
BAMF_RS21555	COG1301	dicarboxylic acid transport
BAMF_RS21560	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS21565	COG0833	amino acid
BAMF_RS21570	COG2040	homocysteine
BAMF_RS21575	COG1115	amino acid carrier protein
BAMF_RS21585	COG4191	Histidine kinase
BAMF_RS21590	COG0784	Response regulator, receiver
BAMF_RS21595	COG3173	Aminoglycoside phosphotransferase
BAMF_RS21610	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMF_RS21615	COG0778	Nitroreductase
BAMF_RS21620	COG0346	lactoylglutathione lyase activity
BAMF_RS21625	COG2259	Doxx family
BAMF_RS21630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS21645	COG3773	Cell wall hydrolase
BAMF_RS21650	COG3540	Alkaline phosphatase
BAMF_RS21655	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAMF_RS21660	COG0805	protein transport
BAMF_RS21665	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BAMF_RS21670	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAMF_RS21675	COG0477	Major facilitator Superfamily
BAMF_RS21680	COG1309	transcriptional regulator
BAMF_RS21690	COG3012	SEC-C Motif Domain Protein
BAMF_RS21690	COG1405	negative regulation of cell septum assembly
BAMF_RS21695	COG0667	Aldo Keto reductase
BAMF_RS21705	COG1595	DNA-templated transcription, initiation
BAMF_RS21710	COG1595	DNA-templated transcription, initiation
BAMF_RS21715	COG1876	peptidase activity
BAMF_RS21720	COG0457	Tetratricopeptide repeat
BAMF_RS21725	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS21730	COG0366	Alpha amylase catalytic
BAMF_RS21740	COG1695	Transcriptional regulator
BAMF_RS21745	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAMF_RS21750	COG1121	(ABC) transporter
BAMF_RS21755	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAMF_RS21760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS21765	COG2310	stress, protein
BAMF_RS21770	COG2310	stress, protein
BAMF_RS21775	COG2310	stress, protein
BAMF_RS21780	COG0861	Integral membrane protein TerC family
BAMF_RS21790	COG3853	Toxic anion resistance protein (TelA)
BAMF_RS21795	COG0477	Major facilitator Superfamily
BAMF_RS21800	COG0517	IMP dehydrogenase activity
BAMF_RS21800	COG4175	Glycine betaine
BAMF_RS21805	COG4176	ABC-type proline glycine betaine transport system permease component
BAMF_RS21810	COG2113	Glycine betaine
BAMF_RS21815	COG1473	amidohydrolase
BAMF_RS21830	COG1714	RDD family
BAMF_RS21840	COG2814	Major facilitator Superfamily
BAMF_RS21845	COG1846	Transcriptional regulator
BAMF_RS21860	COG3403	YqcI/YcgG family
BAMF_RS21865	COG1113	amino acid transport
BAMF_RS21870	COG3665	Urea carboxylase-associated protein
BAMF_RS21880	COG1082	Xylose isomerase domain protein TIM barrel
BAMF_RS21890	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BAMF_RS21895	COG3458	cephalosporin-C deacetylase activity
BAMF_RS21900	COG3541	Predicted nucleotidyltransferase
BAMF_RS21905	COG0506	proline dehydrogenase activity
BAMF_RS21910	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS21915	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMF_RS21920	COG2508	Transcriptional regulator
BAMF_RS21930	COG1587	Uroporphyrinogen-III synthase
BAMF_RS21930	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAMF_RS21935	COG2146	nitrite reductase [NAD(P)H] activity
BAMF_RS21940	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAMF_RS21945	COG2223	nitrite transmembrane transporter activity
BAMF_RS21950	COG0523	cobalamin synthesis protein
BAMF_RS21955	COG1063	alcohol dehydrogenase
BAMF_RS21960	COG1714	RDD family
BAMF_RS21970	COG2723	6-phospho-beta-galactosidase activity
BAMF_RS21980	COG3209	COG3209 Rhs family protein
BAMF_RS21985	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BAMF_RS21990	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BAMF_RS21995	COG1733	regulation of RNA biosynthetic process
BAMF_RS22005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS22010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS22015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS22020	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BAMF_RS22035	COG2364	Membrane
BAMF_RS22040	COG1126	abc transporter atp-binding protein
BAMF_RS22045	COG0765	amino acid transport
BAMF_RS22050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS22055	COG0583	DNA-binding transcription factor activity
BAMF_RS22060	COG0163	prenyltransferase activity
BAMF_RS22065	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BAMF_RS22080	COG3104	oligopeptide transport
BAMF_RS22085	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS22090	COG0697	spore germination
BAMF_RS22100	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BAMF_RS22105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS22110	COG0456	acetyltransferase
BAMF_RS22115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS22120	COG0765	amino acid transport
BAMF_RS22125	COG1126	abc transporter atp-binding protein
BAMF_RS22130	COG1473	amidohydrolase
BAMF_RS22135	COG2079	MmgE PrpD family protein
BAMF_RS22140	COG1136	(ABC) transporter
BAMF_RS22145	COG0577	efflux transmembrane transporter activity
BAMF_RS22150	COG0745	RESPONSE REGULATOR receiver
BAMF_RS22155	COG5002	protein histidine kinase activity
BAMF_RS22155	COG3850	Histidine kinase
BAMF_RS22160	COG0457	Tetratricopeptide repeat
BAMF_RS22175	COG0527	aspartate kinase activity
BAMF_RS22180	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS22185	COG4605	iron ion homeostasis
BAMF_RS22190	COG4604	ABC transporter, ATP-binding protein
BAMF_RS22195	COG4607	ABC-type enterochelin transport system periplasmic component
BAMF_RS22200	COG2814	Major facilitator Superfamily
BAMF_RS22205	COG1309	transcriptional regulator
BAMF_RS22210	COG0778	Nitroreductase
BAMF_RS22215	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BAMF_RS22220	COG0640	Transcriptional regulator
BAMF_RS22225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS22230	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS22235	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS22240	COG4975	Glucose uptake
BAMF_RS22245	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS22250	COG4549	nuclear export factor GLE1
BAMF_RS22255	COG2372	response to copper ion
BAMF_RS22255	COG1276	copper resistance
BAMF_RS22260	COG1349	DNA-binding transcription factor activity
BAMF_RS22270	COG2213	PTS system mannitol-specific
BAMF_RS22275	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS22285	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BAMF_RS22290	COG0561	phosphatase activity
BAMF_RS22300	COG1914	H( )-stimulated, divalent metal cation uptake system
BAMF_RS22310	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAMF_RS22315	COG1984	allophanate hydrolase subunit 2
BAMF_RS22320	COG1414	Transcriptional regulator
BAMF_RS22325	COG2755	lipolytic protein G-D-S-L family
BAMF_RS22335	COG2329	Antibiotic biosynthesis monooxygenase
BAMF_RS22340	COG0768	penicillin binding
BAMF_RS22345	COG4989	oxidoreductase activity
BAMF_RS22350	COG3711	transcriptional antiterminator
BAMF_RS22355	COG0318	PFAM AMP-dependent synthetase and ligase
BAMF_RS22360	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS22365	COG1917	Cupin 2, conserved barrel domain protein
BAMF_RS22370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMF_RS22375	COG3871	stress protein (general stress protein 26)
BAMF_RS22385	COG2814	Major facilitator Superfamily
BAMF_RS22390	COG1522	sequence-specific DNA binding
BAMF_RS22395	COG0551	DNA topoisomerase type I activity
BAMF_RS22395	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMF_RS22400	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BAMF_RS22405	COG3706	GGDEF domain
BAMF_RS22410	COG5298	Protein conserved in bacteria
BAMF_RS22415	COG1215	transferase activity, transferring glycosyl groups
BAMF_RS22425	COG0531	amino acid
BAMF_RS22430	COG0028	Belongs to the TPP enzyme family
BAMF_RS22460	COG0457	Tetratricopeptide repeat
BAMF_RS22475	COG1914	H( )-stimulated, divalent metal cation uptake system
BAMF_RS22490	COG4876	unkown
BAMF_RS22500	COG2076	Multidrug Resistance protein
BAMF_RS22505	COG2217	Heavy metal translocating P-type atpase
BAMF_RS22510	COG3729	General stress protein
BAMF_RS22515	COG0662	Cupin 2, conserved barrel domain protein
BAMF_RS22520	COG2329	Antibiotic biosynthesis monooxygenase
BAMF_RS22525	COG3546	catalase activity
BAMF_RS22535	COG3290	protein histidine kinase activity
BAMF_RS22540	COG4565	transcriptional regulatory protein
BAMF_RS22545	COG1301	dicarboxylic acid transport
BAMF_RS22550	COG0628	permease
BAMF_RS22555	COG1131	(ABC) transporter
BAMF_RS22560	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMF_RS22570	COG1960	acyl-CoA dehydrogenase activity
BAMF_RS22580	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMF_RS22585	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS22595	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAMF_RS22600	COG0513	Belongs to the DEAD box helicase family
BAMF_RS22605	COG3402	PFAM membrane-flanked domain
BAMF_RS22610	COG3428	Bacterial PH domain
BAMF_RS22615	COG0705	Rhomboid family
BAMF_RS22625	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAMF_RS22630	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMF_RS22635	COG0864	Transcriptional regulator
BAMF_RS22640	COG2337	Toxic component of a toxin-antitoxin (TA) module
BAMF_RS22645	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS22650	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS22655	COG2172	sigma factor antagonist activity
BAMF_RS22660	COG2208	phosphoserine phosphatase activity
BAMF_RS22665	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS22675	COG1191	sigma factor activity
BAMF_RS22680	COG2208	phosphoserine phosphatase activity
BAMF_RS22685	COG2183	response to ionizing radiation
BAMF_RS22735	COG1959	2 iron, 2 sulfur cluster binding
BAMF_RS22745	COG1278	Cold shock
BAMF_RS22750	COG1794	racemase activity, acting on amino acids and derivatives
BAMF_RS22765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS22770	COG0477	Major facilitator Superfamily
BAMF_RS22785	COG0277	FAD linked oxidase domain protein
BAMF_RS22805	COG0662	Cupin 2, conserved barrel domain protein
BAMF_RS22810	COG0456	acetyltransferase
BAMF_RS22815	COG2207	Transcriptional regulator
BAMF_RS22815	COG3708	Transcriptional regulator
BAMF_RS22840	COG1064	alcohol dehydrogenase
BAMF_RS22845	COG0789	Transcriptional regulator
BAMF_RS22855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS22860	COG2808	Putative FMN-binding domain
BAMF_RS22865	COG2814	Major facilitator Superfamily
BAMF_RS22870	COG1309	transcriptional regulator
BAMF_RS22875	COG0697	spore germination
BAMF_RS22880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS22885	COG5577	PFAM Coat F domain
BAMF_RS22895	COG1063	alcohol dehydrogenase
BAMF_RS22900	COG5577	PFAM Coat F domain
BAMF_RS22910	COG2409	Drug exporters of the RND superfamily
BAMF_RS22915	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BAMF_RS22920	COG0488	(ABC) transporter
BAMF_RS22925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMF_RS22930	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS22940	COG2814	Major facilitator Superfamily
BAMF_RS22945	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMF_RS22955	COG0730	response to heat
BAMF_RS22960	COG0456	acetyltransferase
BAMF_RS22965	COG4978	Transcriptional regulator
BAMF_RS22965	COG0789	Transcriptional regulator
BAMF_RS22970	COG0697	spore germination
BAMF_RS22975	COG1051	belongs to the nudix hydrolase family
BAMF_RS22980	COG0596	Alpha beta hydrolase
BAMF_RS22985	COG0473	3-isopropylmalate dehydrogenase activity
BAMF_RS22990	COG1802	Transcriptional regulator
BAMF_RS23005	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMF_RS23010	COG1388	LysM domain
BAMF_RS23015	COG2814	Major facilitator Superfamily
BAMF_RS23020	COG2188	Transcriptional regulator
BAMF_RS23025	COG2186	Transcriptional regulator
BAMF_RS23030	COG2807	transmembrane transport
BAMF_RS23035	COG2076	Multidrug Resistance protein
BAMF_RS23040	COG2076	Multidrug Resistance protein
BAMF_RS23045	COG1309	transcriptional regulator
BAMF_RS23050	COG0531	amino acid
BAMF_RS23060	COG3832	glyoxalase III activity
BAMF_RS23065	COG0604	alcohol dehydrogenase
BAMF_RS23070	COG2814	Major facilitator Superfamily
BAMF_RS23125	COG0802	atpase or kinase
BAMF_RS23130	COG1214	PFAM Peptidase M22, glycoprotease
BAMF_RS23135	COG0456	acetyltransferase
BAMF_RS23140	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BAMF_RS23145	COG0488	(ABC) transporter
BAMF_RS23160	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAMF_RS23165	COG0805	protein transport
BAMF_RS23175	COG1266	CAAX protease self-immunity
BAMF_RS23195	COG2856	Zn peptidase
BAMF_RS23210	COG1396	sequence-specific DNA binding
BAMF_RS23255	COG3723	Recombinational DNA repair protein, rece pathway
BAMF_RS23260	COG3935	DnaD domain protein
BAMF_RS23265	COG1484	DNA-dependent DNA replication
BAMF_RS23370	COG1595	DNA-templated transcription, initiation
BAMF_RS23395	COG5484	DNA packaging
BAMF_RS23400	COG1783	phage Terminase large subunit
BAMF_RS23510	COG1388	LysM domain
BAMF_RS23510	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS23510	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS23525	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS23540	COG0457	Tetratricopeptide repeat
BAMF_RS23545	COG1063	alcohol dehydrogenase
BAMF_RS23550	COG2211	Major facilitator Superfamily
BAMF_RS23555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMF_RS23565	COG1842	Phage shock protein A
BAMF_RS23570	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAMF_RS23575	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BAMF_RS23580	COG4260	virion core protein, lumpy skin disease virus
BAMF_RS23585	COG2755	lipolytic protein G-D-S-L family
BAMF_RS23585	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BAMF_RS23595	COG1595	DNA-templated transcription, initiation
BAMF_RS23600	COG1063	alcohol dehydrogenase
BAMF_RS23605	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BAMF_RS23610	COG0823	Involved in the tonB-independent uptake of proteins
BAMF_RS23625	COG2132	Multicopper oxidase
BAMF_RS23630	COG1113	amino acid transport
BAMF_RS23645	COG0714	Associated with various cellular activities
BAMF_RS23650	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BAMF_RS23655	COG1305	Transglutaminase-like
BAMF_RS23675	COG2252	PERMEase
BAMF_RS23680	COG3064	Membrane
BAMF_RS23695	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAMF_RS23700	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAMF_RS23705	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BAMF_RS23710	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BAMF_RS23715	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAMF_RS23730	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BAMF_RS23740	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAMF_RS23745	COG0138	bifunctional purine biosynthesis protein purh
BAMF_RS23750	COG0151	Belongs to the GarS family
BAMF_RS23755	COG1522	sequence-specific DNA binding
BAMF_RS23760	COG0531	amino acid
BAMF_RS23770	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BAMF_RS23775	COG1470	cell adhesion involved in biofilm formation
BAMF_RS23780	COG4496	protein, YerC YecD
BAMF_RS23785	COG0069	glutamate synthase activity
BAMF_RS23800	COG0210	DNA helicase
BAMF_RS23810	COG4851	CamS sex pheromone cAM373 precursor
BAMF_RS23815	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMF_RS23820	COG1285	pathogenesis
BAMF_RS23825	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMF_RS23845	COG1309	transcriptional regulator
BAMF_RS23850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAMF_RS23855	COG1597	lipid kinase activity
BAMF_RS23860	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMF_RS23870	COG1131	(ABC) transporter
BAMF_RS23895	COG5444	nuclease activity
BAMF_RS23900	COG5444	nuclease activity
BAMF_RS23930	COG3546	catalase activity
BAMF_RS23935	COG0454	-acetyltransferase
BAMF_RS23945	COG2323	membrane
BAMF_RS23950	COG2329	Antibiotic biosynthesis monooxygenase
BAMF_RS23955	COG0346	lactoylglutathione lyase activity
BAMF_RS23960	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS23965	COG0196	riboflavin kinase activity
BAMF_RS23970	COG0670	Belongs to the BI1 family
BAMF_RS23975	COG1846	Transcriptional regulator
BAMF_RS23980	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMF_RS23990	COG2124	cytochrome p450
BAMF_RS23990	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMF_RS24000	COG1368	sulfuric ester hydrolase activity
BAMF_RS24005	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAMF_RS24010	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMF_RS24015	COG1442	glycosyl transferase family 8
BAMF_RS24020	COG1216	Glycosyl transferase, family 2
BAMF_RS24025	COG1442	glycosyl transferase family 8
BAMF_RS24030	COG2223	nitrite transmembrane transporter activity
BAMF_RS24035	COG0531	amino acid
BAMF_RS24040	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS24045	COG0840	transmembrane signaling receptor activity
BAMF_RS24050	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS24055	COG0463	Glycosyl transferase, family 2
BAMF_RS24055	COG0457	Tetratricopeptide repeat
BAMF_RS24060	COG0488	(ABC) transporter
BAMF_RS24065	COG0789	Transcriptional regulator
BAMF_RS24070	COG2814	Major facilitator Superfamily
BAMF_RS24075	COG0488	(ABC) transporter
BAMF_RS24080	COG0513	Belongs to the DEAD box helicase family
BAMF_RS24100	COG3866	Pectate lyase
BAMF_RS24105	COG0471	metal ion transport
BAMF_RS24125	COG0745	RESPONSE REGULATOR receiver
BAMF_RS24125	COG2972	Histidine kinase
BAMF_RS24140	COG3764	Sortase (surface protein transpeptidase)
BAMF_RS24145	COG3290	protein histidine kinase activity
BAMF_RS24150	COG4565	transcriptional regulatory protein
BAMF_RS24155	COG3181	Tripartite tricarboxylate transporter family receptor
BAMF_RS24160	COG2851	Citrate transporter
BAMF_RS24170	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BAMF_RS24180	COG2258	MOSC domain
BAMF_RS24190	COG0024	Methionine aminopeptidase
BAMF_RS24195	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS24195	COG1263	PTS System
BAMF_RS24205	COG1368	sulfuric ester hydrolase activity
BAMF_RS24215	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMF_RS24235	COG0366	Alpha amylase catalytic
BAMF_RS24240	COG2188	Transcriptional regulator
BAMF_RS24245	COG0778	Nitroreductase
BAMF_RS24260	COG0737	Belongs to the 5'-nucleotidase family
BAMF_RS24265	COG0693	protein deglycase activity
BAMF_RS24270	COG1609	Transcriptional regulator
BAMF_RS24285	COG2814	Major facilitator Superfamily
BAMF_RS24295	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAMF_RS24300	COG4980	gas vesicle protein
BAMF_RS24305	COG1295	ribonuclease BN
BAMF_RS24310	COG0477	Major facilitator Superfamily
BAMF_RS24315	COG0387	Pfam Sodium calcium exchanger
BAMF_RS24325	COG0668	transmembrane transport
BAMF_RS24340	COG0726	polysaccharide deacetylase
BAMF_RS24355	COG0598	Magnesium transport protein CorA
BAMF_RS24360	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAMF_RS24365	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMF_RS24380	COG1132	(ABC) transporter
BAMF_RS24385	COG1132	(ABC) transporter
BAMF_RS24390	COG0515	serine threonine protein kinase
BAMF_RS24400	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMF_RS24405	COG4637	Psort location Cytoplasmic, score
BAMF_RS24410	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMF_RS24415	COG0022	dehydrogenase e1 component
BAMF_RS24420	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMF_RS24425	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMF_RS24430	COG3284	Transcriptional regulator
BAMF_RS24440	COG1486	melibiose metabolic process
BAMF_RS24445	COG1737	Transcriptional regulator
BAMF_RS24450	COG1263	PTS System
BAMF_RS24450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS24455	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS24460	COG1132	(ABC) transporter
BAMF_RS24465	COG1132	(ABC) transporter
BAMF_RS24470	COG2259	Doxx family
BAMF_RS24475	COG2514	catechol 2,3-dioxygenase activity
BAMF_RS24485	COG1695	Transcriptional regulator
BAMF_RS24490	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMF_RS24495	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
BAMF_RS24500	COG2732	(Barnase) inhibitor
BAMF_RS24505	COG2318	DinB family
BAMF_RS24510	COG2814	Major facilitator Superfamily
BAMF_RS24515	COG1846	Transcriptional regulator
BAMF_RS24520	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BAMF_RS24520	COG0392	lysyltransferase activity
BAMF_RS24525	COG0384	phenazine biosynthesis protein PhzF
BAMF_RS24530	COG0778	Nitroreductase
BAMF_RS24540	COG1090	epimerase
BAMF_RS24565	COG3591	Belongs to the peptidase S1B family
BAMF_RS24580	COG3103	Sh3 type 3 domain protein
BAMF_RS24595	COG0463	Glycosyl transferase, family 2
BAMF_RS24600	COG4485	Bacterial membrane protein, YfhO
BAMF_RS24605	COG1988	membrane-bound metal-dependent
BAMF_RS24615	COG0582	viral genome integration into host DNA
BAMF_RS24650	COG3645	SOS response
BAMF_RS24650	COG3646	Phage regulatory protein
BAMF_RS24675	COG0305	Participates in initiation and elongation during chromosome replication
BAMF_RS24700	COG1595	DNA-templated transcription, initiation
BAMF_RS24745	COG0740	serine-type endopeptidase activity
BAMF_RS24855	COG1194	a g-specific adenine glycosylase
BAMF_RS24865	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS24885	COG1132	(ABC) transporter
BAMF_RS24890	COG4129	membrane
BAMF_RS24900	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAMF_RS24905	COG0735	belongs to the Fur family
BAMF_RS25020	COG4974	Belongs to the 'phage' integrase family
BAMF_RS25080	COG1484	DNA-dependent DNA replication
BAMF_RS25140	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS25140	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS25180	COG1780	Probably involved in ribonucleotide reductase function
BAMF_RS25185	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMF_RS25195	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMF_RS25200	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMF_RS25205	COG0756	dUTP diphosphatase activity
BAMF_RS25215	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BAMF_RS25250	COG1595	DNA-templated transcription, initiation
BAMF_RS25265	COG1793	dna ligase
BAMF_RS25310	COG0582	viral genome integration into host DNA
BAMF_RS25400	COG1705	Flagellar rod assembly protein muramidase FlgJ
BAMF_RS25410	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS25435	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS25435	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS25435	COG1388	LysM domain
BAMF_RS25475	COG3340	Belongs to the peptidase S51 family
BAMF_RS25485	COG0277	FAD linked oxidase domain protein
BAMF_RS25495	COG0747	negative chemotaxis
BAMF_RS25500	COG0601	transmembrane transport
BAMF_RS25505	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMF_RS25510	COG0444	Belongs to the ABC transporter superfamily
BAMF_RS25520	COG0753	catalase activity
BAMF_RS25530	COG1116	anion transmembrane transporter activity
BAMF_RS25535	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMF_RS25540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMF_RS25565	COG1476	TRANSCRIPTIONal
BAMF_RS25575	COG3382	B3 4 domain protein
BAMF_RS25580	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAMF_RS25590	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BAMF_RS25595	COG0789	Transcriptional regulator
BAMF_RS25600	COG1664	Polymer-forming cytoskeletal
BAMF_RS25605	COG1664	Polymer-forming cytoskeletal
BAMF_RS25610	COG2766	serine protein kinase
BAMF_RS25620	COG1846	Transcriptional regulator
BAMF_RS25625	COG1566	PFAM secretion protein HlyD family protein
BAMF_RS25630	COG2814	Major facilitator Superfamily
BAMF_RS25635	COG0655	NAD(P)H dehydrogenase (quinone) activity
BAMF_RS25650	COG1725	Transcriptional regulator
BAMF_RS25655	COG1131	(ABC) transporter
BAMF_RS25660	COG1131	(ABC) transporter
BAMF_RS25665	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMF_RS25670	COG1278	Cold shock
BAMF_RS25675	COG1464	Belongs to the NlpA lipoprotein family
BAMF_RS25680	COG3706	GGDEF domain
BAMF_RS25685	COG1823	symporter activity
BAMF_RS25690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMF_RS25710	COG5577	PFAM Coat F domain
BAMF_RS25715	COG0737	Belongs to the 5'-nucleotidase family
BAMF_RS25715	COG1525	nuclease
BAMF_RS25715	COG4085	toxin activity
BAMF_RS25720	COG3764	Sortase (surface protein transpeptidase)
BAMF_RS25725	COG0564	pseudouridine synthase activity
BAMF_RS25735	COG0517	IMP dehydrogenase activity
BAMF_RS25740	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAMF_RS25745	COG3153	acetyltransferase
BAMF_RS25745	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAMF_RS25750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMF_RS25755	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAMF_RS25760	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BAMF_RS25770	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAMF_RS25775	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAMF_RS25780	COG2203	Gaf domain
BAMF_RS25780	COG4585	Histidine kinase
BAMF_RS25785	COG2197	response regulator
BAMF_RS25790	COG0431	NADPH-dependent FMN reductase
BAMF_RS25805	COG1388	LysM domain
BAMF_RS25805	COG0791	NLP P60 protein
BAMF_RS25810	COG1959	2 iron, 2 sulfur cluster binding
BAMF_RS25815	COG0668	transmembrane transport
BAMF_RS25820	COG2719	SpoVR family
BAMF_RS25825	COG1785	Belongs to the alkaline phosphatase family
BAMF_RS25830	COG1388	LysM domain
BAMF_RS25830	COG0791	NLP P60 protein
BAMF_RS25835	COG0583	DNA-binding transcription factor activity
BAMF_RS25840	COG0372	Belongs to the citrate synthase family
BAMF_RS25845	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS25850	COG0531	amino acid
BAMF_RS25855	COG0733	neurotransmitter:sodium symporter activity
BAMF_RS25870	COG1595	DNA-templated transcription, initiation
BAMF_RS25875	COG0204	Acyl-transferase
BAMF_RS25880	COG1253	flavin adenine dinucleotide binding
BAMF_RS25885	COG0789	Transcriptional regulator
BAMF_RS25890	COG0436	Aminotransferase
BAMF_RS25895	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMF_RS25900	COG1253	flavin adenine dinucleotide binding
BAMF_RS25905	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMF_RS25910	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMF_RS25915	COG0584	glycerophosphoryl diester phosphodiesterase
BAMF_RS25920	COG0668	transmembrane transport
BAMF_RS25925	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BAMF_RS25930	COG0726	polysaccharide deacetylase
BAMF_RS25935	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS25940	COG3226	Transcriptional regulator
BAMF_RS25950	COG0589	response to stress
BAMF_RS25955	COG1132	(ABC) transporter
BAMF_RS25960	COG1132	(ABC) transporter
BAMF_RS25965	COG0702	epimerase
BAMF_RS25985	COG0189	ligase activity
BAMF_RS25990	COG0189	ligase activity
BAMF_RS26005	COG0561	phosphatase activity
BAMF_RS26010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMF_RS26020	COG0475	glutathione-regulated potassium exporter activity
BAMF_RS26025	COG0490	domain, Protein
BAMF_RS26035	COG1024	Enoyl-CoA hydratase
BAMF_RS26045	COG4152	abc transporter atp-binding protein
BAMF_RS26050	COG1668	transmembrane transport
BAMF_RS26055	COG0420	3'-5' exonuclease activity
BAMF_RS26060	COG4717	serine-type aminopeptidase activity
BAMF_RS26075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMF_RS26110	COG4980	gas vesicle protein
BAMF_RS26125	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BAMF_RS26130	COG0537	adenosine 5'-monophosphoramidase activity
BAMF_RS26135	COG1131	(ABC) transporter
BAMF_RS26140	COG4473	ABC transporter
BAMF_RS26150	COG1473	amidohydrolase
BAMF_RS26155	COG3069	C4-dicarboxylate transmembrane transporter activity
BAMF_RS26160	COG2329	Antibiotic biosynthesis monooxygenase
BAMF_RS26165	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMF_RS26175	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BAMF_RS26180	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BAMF_RS26185	COG1309	transcriptional regulator
BAMF_RS26190	COG1511	domain protein
BAMF_RS26195	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS26205	COG1363	Peptidase, m42
BAMF_RS26210	COG1301	dicarboxylic acid transport
BAMF_RS26215	COG1234	tRNA 3'-trailer cleavage
BAMF_RS26220	COG0095	Lipoate-protein ligase
BAMF_RS26225	COG0702	epimerase
BAMF_RS26230	COG0318	PFAM AMP-dependent synthetase and ligase
BAMF_RS26240	COG0501	Belongs to the peptidase M48B family
BAMF_RS26245	COG1404	Belongs to the peptidase S8 family
BAMF_RS26250	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BAMF_RS26255	COG0406	alpha-ribazole phosphatase activity
BAMF_RS26260	COG0183	Belongs to the thiolase family
BAMF_RS26270	COG1268	BioY protein
BAMF_RS26280	COG0723	plastoquinol--plastocyanin reductase activity
BAMF_RS26280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMF_RS26285	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS26295	COG4903	ComK protein
BAMF_RS26300	COG5646	InterPro IPR014922
BAMF_RS26325	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMF_RS26340	COG0398	Pfam SNARE associated Golgi protein
BAMF_RS26345	COG0681	Belongs to the peptidase S26 family
BAMF_RS26350	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMF_RS26355	COG1846	Transcriptional regulator
BAMF_RS26360	COG3180	Ammonia monooxygenase
BAMF_RS26365	COG2814	Major facilitator Superfamily
BAMF_RS26375	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BAMF_RS26380	COG2323	membrane
BAMF_RS26395	COG0420	3'-5' exonuclease activity
BAMF_RS26400	COG0419	ATPase involved in DNA repair
BAMF_RS26405	COG1403	HNH endonuclease
BAMF_RS26445	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAMF_RS26455	COG1404	Belongs to the peptidase S8 family
BAMF_RS26465	COG0367	asparagine synthase
BAMF_RS26470	COG1562	ergosterol biosynthetic process
BAMF_RS26475	COG0534	Mate efflux family protein
BAMF_RS26480	COG1917	Cupin 2, conserved barrel domain protein
BAMF_RS26480	COG2207	Transcriptional regulator
BAMF_RS26485	COG1609	Transcriptional regulator
BAMF_RS26490	COG0673	inositol 2-dehydrogenase activity
BAMF_RS26495	COG2318	DinB family
BAMF_RS26500	COG1279	arginine transmembrane transporter activity
BAMF_RS26505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS26510	COG1357	PFAM Pentapeptide repeats (8 copies)
BAMF_RS26515	COG2153	protein acetylation
BAMF_RS26520	COG0646	methionine synthase
BAMF_RS26520	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAMF_RS26530	COG2996	Protein conserved in bacteria
BAMF_RS26535	COG1744	ABC transporter substrate-binding protein PnrA-like
BAMF_RS26540	COG0840	transmembrane signaling receptor activity
BAMF_RS26545	COG2124	cytochrome p450
BAMF_RS26550	COG1307	EDD domain protein, DegV family
BAMF_RS26555	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS26570	COG0561	phosphatase activity
BAMF_RS26575	COG1073	alpha beta
BAMF_RS26580	COG2151	metal-sulfur cluster biosynthetic enzyme
BAMF_RS26590	COG0277	FAD linked oxidase domain protein
BAMF_RS26595	COG2271	Major facilitator Superfamily
BAMF_RS26605	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BAMF_RS26615	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMF_RS26620	COG0505	Belongs to the CarA family
BAMF_RS26625	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAMF_RS26630	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BAMF_RS26645	COG2267	carboxylic ester hydrolase activity
BAMF_RS26655	COG1744	ABC transporter substrate-binding protein PnrA-like
BAMF_RS26670	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS26675	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMF_RS26680	COG5504	Zn-dependent protease
BAMF_RS26685	COG0444	Belongs to the ABC transporter superfamily
BAMF_RS26690	COG4608	Belongs to the ABC transporter superfamily
BAMF_RS26700	COG0601	transmembrane transport
BAMF_RS26705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMF_RS26715	COG0180	Tryptophanyl-tRNA synthetase
BAMF_RS26720	COG4166	transmembrane transport
BAMF_RS26725	COG0601	transmembrane transport
BAMF_RS26730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMF_RS26735	COG0444	Belongs to the ABC transporter superfamily
BAMF_RS26740	COG4608	Belongs to the ABC transporter superfamily
BAMF_RS26750	COG0456	acetyltransferase
BAMF_RS26755	COG1393	Belongs to the ArsC family
BAMF_RS26760	COG0861	Integral membrane protein TerC family
BAMF_RS26765	COG4862	establishment of competence for transformation
BAMF_RS26770	COG4469	Competence protein
BAMF_RS26775	COG1164	Oligoendopeptidase f
BAMF_RS26785	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAMF_RS26790	COG2346	COG2346, Truncated hemoglobins
BAMF_RS26795	COG0741	lytic transglycosylase activity
BAMF_RS26800	COG4116	CYTH
BAMF_RS26810	COG2357	RelA SpoT domain protein
BAMF_RS26815	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMF_RS26820	COG0564	pseudouridine synthase activity
BAMF_RS26835	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAMF_RS26840	COG0352	thiamine-phosphate diphosphorylase activity
BAMF_RS26845	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMF_RS26850	COG2104	thiamine diphosphate biosynthetic process
BAMF_RS26860	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMF_RS26865	COG0351	phosphomethylpyrimidine kinase
BAMF_RS26870	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BAMF_RS26925	COG0210	DNA helicase
BAMF_RS26935	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS26945	COG1131	(ABC) transporter
BAMF_RS26955	COG2153	protein acetylation
BAMF_RS26965	COG2382	esterase
BAMF_RS26970	COG0626	cystathionine gamma-synthase activity
BAMF_RS26975	COG0626	cystathionine gamma-synthase activity
BAMF_RS27000	COG4282	regulation of fungal-type cell wall biogenesis
BAMF_RS27025	COG5290	Psort location Cytoplasmic, score
BAMF_RS27045	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMF_RS27095	COG2367	Beta-lactamase
BAMF_RS27100	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BAMF_RS27105	COG0477	Major facilitator Superfamily
BAMF_RS27110	COG1846	Transcriptional regulator
BAMF_RS27125	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS27125	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS27130	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMF_RS27135	COG2723	6-phospho-beta-galactosidase activity
BAMF_RS27140	COG1349	DNA-binding transcription factor activity
BAMF_RS27160	COG1285	pathogenesis
BAMF_RS27165	COG2205	protein histidine kinase activity
BAMF_RS27175	COG3383	formate dehydrogenase (NAD+) activity
BAMF_RS27180	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMF_RS27185	COG0390	transport system, permease component
BAMF_RS27190	COG1587	Uroporphyrinogen-III synthase
BAMF_RS27200	COG1819	glycosyl
BAMF_RS27205	COG2124	cytochrome p450
BAMF_RS27210	COG2427	Protein of unknown function (DUF1641)
BAMF_RS27215	COG3383	formate dehydrogenase (NAD+) activity
BAMF_RS27220	COG3383	formate dehydrogenase (NAD+) activity
BAMF_RS27225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMF_RS27230	COG0697	spore germination
BAMF_RS27235	COG4297	protein containing double-stranded beta helix domain
BAMF_RS27245	COG1252	NADH dehydrogenase
BAMF_RS27255	COG1609	Transcriptional regulator
BAMF_RS27260	COG2721	sulfolactate sulfo-lyase activity
BAMF_RS27265	COG0745	RESPONSE REGULATOR receiver
BAMF_RS27270	COG5002	protein histidine kinase activity
BAMF_RS27280	COG0730	response to heat
BAMF_RS27285	COG2318	DinB family
BAMF_RS27290	COG0457	Tetratricopeptide repeat
BAMF_RS27300	COG1388	LysM domain
BAMF_RS27300	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS27300	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS27310	COG4195	phage-related replication protein
BAMF_RS27315	COG2856	Zn peptidase
BAMF_RS27320	COG1396	sequence-specific DNA binding
BAMF_RS27330	COG1522	sequence-specific DNA binding
BAMF_RS27335	COG1484	DNA-dependent DNA replication
BAMF_RS27350	COG1595	DNA-templated transcription, initiation
BAMF_RS27355	COG3728	DNA packaging
BAMF_RS27355	COG5484	DNA packaging
BAMF_RS27360	COG1783	phage Terminase large subunit
BAMF_RS27365	COG5518	Phage portal protein
BAMF_RS27370	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BAMF_RS27375	COG4653	Phage capsid family
BAMF_RS27435	COG1652	LysM domain
BAMF_RS27440	COG4193	domain, Protein
BAMF_RS27450	COG3628	GPW Gp25 family protein
BAMF_RS27455	COG3299	homolog of phage Mu protein gp47
BAMF_RS27460	COG3778	Protein conserved in bacteria
BAMF_RS27500	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS27500	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS27515	COG0306	phosphate transporter
BAMF_RS27520	COG1392	Phosphate transport regulator
BAMF_RS27525	COG0531	amino acid
BAMF_RS27530	COG0346	lactoylglutathione lyase activity
BAMF_RS27535	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BAMF_RS27540	COG0463	Glycosyl transferase, family 2
BAMF_RS27545	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMF_RS27550	COG0477	Major facilitator Superfamily
BAMF_RS27555	COG2362	D-Aminopeptidase
BAMF_RS27560	COG0601	transmembrane transport
BAMF_RS27565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMF_RS27570	COG0444	Belongs to the ABC transporter superfamily
BAMF_RS27575	COG4166	transmembrane transport
BAMF_RS27580	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMF_RS27585	COG4948	Mandelate Racemase Muconate Lactonizing
BAMF_RS27590	COG0791	NLP P60 protein
BAMF_RS27595	COG4608	Belongs to the ABC transporter superfamily
BAMF_RS27600	COG2706	6-phosphogluconolactonase activity
BAMF_RS27605	COG1834	amidinotransferase
BAMF_RS27610	COG1607	acyl-coa hydrolase
BAMF_RS27615	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMF_RS27620	COG2076	Multidrug Resistance protein
BAMF_RS27625	COG2076	Multidrug Resistance protein
BAMF_RS27630	COG0788	formyltetrahydrofolate deformylase activity
BAMF_RS27635	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAMF_RS27645	COG1764	response to oxidative stress
BAMF_RS27650	COG1846	Transcriptional regulator
BAMF_RS27655	COG1764	response to oxidative stress
BAMF_RS27670	COG0463	Glycosyl transferase, family 2
BAMF_RS27670	COG0457	Tetratricopeptide repeat
BAMF_RS27680	COG2814	Major facilitator Superfamily
BAMF_RS27685	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMF_RS27695	COG1404	Belongs to the peptidase S8 family
BAMF_RS27700	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS27705	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMF_RS27710	COG1122	ATPase activity
BAMF_RS27715	COG4721	ABC-type cobalt transport system, permease component
BAMF_RS27720	COG1388	LysM domain
BAMF_RS27720	COG3858	chitin binding
BAMF_RS27725	COG2239	Acts as a magnesium transporter
BAMF_RS27730	COG0789	Transcriptional regulator
BAMF_RS27740	COG1846	Transcriptional regulator
BAMF_RS27745	COG0726	polysaccharide deacetylase
BAMF_RS27750	COG3285	dna ligase
BAMF_RS27750	COG1793	dna ligase
BAMF_RS27755	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BAMF_RS27760	COG3300	MHYT domain
BAMF_RS27760	COG5001	Diguanylate cyclase
BAMF_RS27765	COG0586	Pfam SNARE associated Golgi protein
BAMF_RS27770	COG0861	Integral membrane protein TerC family
BAMF_RS27775	COG1191	sigma factor activity
BAMF_RS27800	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMF_RS27805	COG2323	membrane
BAMF_RS27810	COG3594	Acyltransferase
BAMF_RS27815	COG5002	protein histidine kinase activity
BAMF_RS27820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMF_RS27835	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAMF_RS27840	COG0436	Aminotransferase
BAMF_RS27870	COG3852	Histidine kinase
BAMF_RS27875	COG1846	Transcriptional regulator
BAMF_RS27880	COG1360	Flagellar Motor Protein
BAMF_RS27885	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMF_RS27890	COG0542	response to heat
BAMF_RS27895	COG3949	Membrane
BAMF_RS27910	COG0720	synthase
BAMF_RS27915	COG0602	queuosine metabolic process
BAMF_RS27930	COG4873	Protein conserved in bacteria
BAMF_RS27940	COG3773	Cell wall hydrolase
BAMF_RS27945	COG2244	polysaccharide biosynthetic process
BAMF_RS27950	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS27955	COG2217	Heavy metal translocating P-type atpase
BAMF_RS27960	COG0006	proline dipeptidase activity
BAMF_RS27965	COG1609	Transcriptional regulator
BAMF_RS27970	COG3711	transcriptional antiterminator
BAMF_RS27975	COG1263	PTS System
BAMF_RS27975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS27975	COG2190	(PTS) system
BAMF_RS27980	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS27985	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BAMF_RS27995	COG1533	DNA photolyase activity
BAMF_RS28000	COG0840	transmembrane signaling receptor activity
BAMF_RS28005	COG2084	Dehydrogenase
BAMF_RS28015	COG2340	Cysteine-rich secretory protein family
BAMF_RS28020	COG0768	penicillin binding
BAMF_RS28025	COG4191	Histidine kinase
BAMF_RS28030	COG0436	Aminotransferase
BAMF_RS28035	COG0835	chemotaxis
BAMF_RS28035	COG0784	Response regulator, receiver
BAMF_RS28045	COG2814	Major facilitator Superfamily
BAMF_RS28050	COG1376	ErfK ybiS ycfS ynhG family protein
BAMF_RS28055	COG1408	metallophosphoesterase
BAMF_RS28060	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS28070	COG2200	EAL domain
BAMF_RS28075	COG4703	Protein of unknown function (DUF1797)
BAMF_RS28080	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BAMF_RS28090	COG0517	IMP dehydrogenase activity
BAMF_RS28095	COG0583	DNA-binding transcription factor activity
BAMF_RS28100	COG0716	FMN binding
BAMF_RS28110	COG0716	FMN binding
BAMF_RS28130	COG0668	transmembrane transport
BAMF_RS28160	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMF_RS28165	COG0303	'Molybdopterin
BAMF_RS28170	COG1763	Mo-molybdopterin cofactor biosynthetic process
BAMF_RS28175	COG0314	molybdopterin synthase activity
BAMF_RS28180	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BAMF_RS28190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAMF_RS28195	COG1136	(ABC) transporter
BAMF_RS28200	COG0577	efflux transmembrane transporter activity
BAMF_RS28205	COG1349	DNA-binding transcription factor activity
BAMF_RS28210	COG1105	Belongs to the carbohydrate kinase PfkB family
BAMF_RS28215	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMF_RS28215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMF_RS28215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS28220	COG0681	Belongs to the peptidase S26 family
BAMF_RS28230	COG0488	(ABC) transporter
BAMF_RS28235	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMF_RS28240	COG2309	aminopeptidase activity
BAMF_RS28245	COG1077	Cell shape determining protein MreB Mrl
BAMF_RS28250	COG2002	toxin-antitoxin pair type II binding
BAMF_RS28255	COG3852	Histidine kinase
BAMF_RS28260	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BAMF_RS28260	COG2105	PFAM AIG2 family protein
BAMF_RS28265	COG0569	domain protein
BAMF_RS28275	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMF_RS28285	COG0561	phosphatase activity
BAMF_RS28290	COG0242	peptide deformylase activity
BAMF_RS28300	COG0497	DNA recombination
BAMF_RS28305	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMF_RS28310	COG0022	dehydrogenase e1 component
BAMF_RS28315	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMF_RS28320	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMF_RS28325	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS28335	COG1982	Orn Lys Arg decarboxylase major
BAMF_RS28355	COG0483	inositol monophosphate 1-phosphatase activity
BAMF_RS28365	COG3227	Zinc metalloprotease (Elastase)
BAMF_RS28390	COG1217	gtp-binding protein TYPA
BAMF_RS28400	COG4896	Protein conserved in bacteria
BAMF_RS28410	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAMF_RS28415	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAMF_RS28420	COG2066	Belongs to the glutaminase family
BAMF_RS28430	COG0772	Belongs to the SEDS family
BAMF_RS28435	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAMF_RS28450	COG2010	Cytochrome c
BAMF_RS28450	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAMF_RS28455	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAMF_RS28460	COG1845	cytochrome c oxidase, subunit III
BAMF_RS28465	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BAMF_RS28470	COG3336	cytochrome c oxidase
BAMF_RS28480	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BAMF_RS28485	COG2340	Cysteine-rich secretory protein family
BAMF_RS28500	COG3679	Belongs to the UPF0342 family
BAMF_RS28510	COG0742	ribosomal rna small subunit methyltransferase
BAMF_RS28520	COG3314	Sporulation integral membrane protein YlbJ
BAMF_RS28525	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMF_RS28530	COG3480	Lon protease (S16) C-terminal proteolytic domain
BAMF_RS28540	COG1399	metal-binding, possibly nucleic acid-binding protein
BAMF_RS28555	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMF_RS28575	COG4839	cell division protein FtsL
BAMF_RS28580	COG0768	penicillin binding
BAMF_RS28585	COG0768	penicillin binding
BAMF_RS28605	COG0772	Belongs to the SEDS family
BAMF_RS28620	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAMF_RS28625	COG0849	cell division
BAMF_RS28630	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BAMF_RS28635	COG4412	M6 family metalloprotease domain protein
BAMF_RS28635	COG1404	Belongs to the peptidase S8 family
BAMF_RS28645	COG1191	sigma factor activity
BAMF_RS28650	COG1191	sigma factor activity
BAMF_RS28655	COG1119	ATPase activity
BAMF_RS28660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMF_RS28665	COG1873	PFAM PRC-barrel domain
BAMF_RS28670	COG1496	oxidoreductase activity
BAMF_RS28675	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAMF_RS28685	COG0762	integral membrane protein
BAMF_RS28690	COG2302	S4 RNA-binding domain
BAMF_RS28695	COG3599	regulation of cell shape
BAMF_RS28705	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAMF_RS28710	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMF_RS28720	COG0564	pseudouridine synthase activity
BAMF_RS28730	COG2233	PERMEase
BAMF_RS28740	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BAMF_RS28745	COG0505	Belongs to the CarA family
BAMF_RS28750	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAMF_RS28765	COG0284	orotidine-5'-phosphate decarboxylase activity
BAMF_RS28770	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BAMF_RS28785	COG0306	phosphate transporter
BAMF_RS28800	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAMF_RS28805	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BAMF_RS28810	COG1648	precorrin-2 dehydrogenase activity
BAMF_RS28820	COG1293	RNA-binding protein homologous to eukaryotic snRNP
BAMF_RS28825	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAMF_RS28830	COG1561	YicC-like family, N-terminal region
BAMF_RS28840	COG0194	GDP metabolic process
BAMF_RS28850	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMF_RS28855	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAMF_RS28860	COG0242	peptide deformylase activity
BAMF_RS28870	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAMF_RS28870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAMF_RS28880	COG0631	protein serine/threonine phosphatase activity
BAMF_RS28885	COG0515	serine threonine protein kinase
BAMF_RS28885	COG2815	serine threonine protein kinase
BAMF_RS28895	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAMF_RS28900	COG1564	THIamine pyrophosphokinase
BAMF_RS28915	COG1302	Protein conserved in bacteria
BAMF_RS28920	COG1461	Dihydroxyacetone kinase
BAMF_RS28925	COG1760	l-serine dehydratase
BAMF_RS28930	COG1760	l-serine dehydratase
BAMF_RS28935	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAMF_RS28950	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAMF_RS28955	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS28970	COG1196	nuclear chromosome segregation
BAMF_RS28975	COG0552	protein localization to endoplasmic reticulum
BAMF_RS28985	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAMF_RS28995	COG1837	Belongs to the UPF0109 family
BAMF_RS29020	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAMF_RS29035	COG2257	FlhB HrpN YscU SpaS Family
BAMF_RS29045	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAMF_RS29050	COG0758	DNA mediated transformation
BAMF_RS29055	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMF_RS29065	COG4974	Belongs to the 'phage' integrase family
BAMF_RS29085	COG1815	bacterial-type flagellum-dependent cell motility
BAMF_RS29090	COG1558	bacterial-type flagellum-dependent cell motility
BAMF_RS29095	COG1677	Flagellar hook-basal body complex protein FliE
BAMF_RS29100	COG1766	The M ring may be actively involved in energy transduction
BAMF_RS29105	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMF_RS29110	COG1317	bacterial-type flagellum organization
BAMF_RS29115	COG1157	protein secretion by the type III secretion system
BAMF_RS29120	COG2882	bacterial-type flagellum organization
BAMF_RS29125	COG3334	PFAM MgtE intracellular
BAMF_RS29130	COG3144	bacterial-type flagellum assembly
BAMF_RS29135	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BAMF_RS29140	COG4786	Flagellar basal body rod
BAMF_RS29145	COG1582	Flagellar protein (FlbD)
BAMF_RS29150	COG1580	Controls the rotational direction of flagella during chemotaxis
BAMF_RS29155	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMF_RS29160	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMF_RS29160	COG1776	CheC inhibitor of MCP methylation
BAMF_RS29165	COG2201	protein-glutamate methylesterase activity
BAMF_RS29170	COG3190	flagellar
BAMF_RS29175	COG1338	Plays a role in the flagellum-specific transport system
BAMF_RS29180	COG1987	bacterial-type flagellum assembly
BAMF_RS29185	COG1684	flagellar biosynthetic protein fliR
BAMF_RS29190	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMF_RS29195	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMF_RS29200	COG1419	protein localization to endoplasmic reticulum
BAMF_RS29205	COG0455	bacterial-type flagellum organization
BAMF_RS29215	COG2198	Histidine kinase
BAMF_RS29215	COG0643	Histidine kinase
BAMF_RS29220	COG0835	chemotaxis
BAMF_RS29225	COG1776	CheC inhibitor of MCP methylation
BAMF_RS29235	COG1191	sigma factor activity
BAMF_RS29265	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BAMF_RS29270	COG4589	Belongs to the CDS family
BAMF_RS29280	COG0750	zinc metalloprotease
BAMF_RS29290	COG2176	DNA-directed DNA polymerase activity
BAMF_RS29300	COG0195	Participates in both transcription termination and antitermination
BAMF_RS29305	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BAMF_RS29310	COG1358	cellular component organization or biogenesis
BAMF_RS29320	COG1550	Protein conserved in bacteria
BAMF_RS29335	COG0196	riboflavin kinase activity
BAMF_RS29350	COG0726	polysaccharide deacetylase
BAMF_RS29355	COG0612	Peptidase, M16
BAMF_RS29360	COG1873	PFAM PRC-barrel domain
BAMF_RS29365	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMF_RS29370	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMF_RS29375	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAMF_RS29380	COG0527	aspartate kinase activity
BAMF_RS29390	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMF_RS29395	COG0740	serine-type endopeptidase activity
BAMF_RS29405	COG1674	ftsk spoiiie
BAMF_RS29405	COG4980	gas vesicle protein
BAMF_RS29410	COG2188	Transcriptional regulator
BAMF_RS29415	COG2814	Major facilitator Superfamily
BAMF_RS29420	COG1846	Transcriptional regulator
BAMF_RS29425	COG1033	growth of symbiont in host cell
BAMF_RS29425	COG2409	Drug exporters of the RND superfamily
BAMF_RS29430	COG0612	Peptidase, M16
BAMF_RS29435	COG0612	Peptidase, M16
BAMF_RS29440	COG0300	oxidoreductase activity
BAMF_RS29455	COG1426	Protein conserved in bacteria
BAMF_RS29460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAMF_RS29475	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMF_RS29485	COG1692	metallophosphoesterase
BAMF_RS29490	COG2359	stage V sporulation protein S
BAMF_RS29510	COG4550	Control of competence regulator ComK, YlbF/YmcA
BAMF_RS29550	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMF_RS29555	COG3425	synthase
BAMF_RS29560	COG1024	Enoyl-CoA hydratase
BAMF_RS29565	COG1024	Enoyl-CoA hydratase
BAMF_RS29570	COG0300	oxidoreductase activity
BAMF_RS29570	COG3321	synthase
BAMF_RS29570	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS29570	COG0318	PFAM AMP-dependent synthetase and ligase
BAMF_RS29570	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS29575	COG0300	oxidoreductase activity
BAMF_RS29575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMF_RS29575	COG3321	synthase
BAMF_RS29575	COG4221	oxidoreductase activity
BAMF_RS29580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS29580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMF_RS29580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS29580	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS29580	COG3321	synthase
BAMF_RS29580	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS29580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMF_RS29580	COG3321	synthase
BAMF_RS29580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMF_RS29580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMF_RS29585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS29585	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS29585	COG3321	synthase
BAMF_RS29585	COG4221	oxidoreductase activity
BAMF_RS29590	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BAMF_RS29590	COG3321	synthase
BAMF_RS29590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMF_RS29590	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BAMF_RS29595	COG2124	cytochrome p450
BAMF_RS29600	COG3209	COG3209 Rhs family protein
BAMF_RS29605	COG3619	membrane
BAMF_RS29615	COG1404	Belongs to the peptidase S8 family
BAMF_RS29625	COG4195	phage-related replication protein
BAMF_RS29630	COG1764	response to oxidative stress
BAMF_RS29640	COG2076	Multidrug Resistance protein
BAMF_RS29680	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMF_RS29685	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMF_RS29690	COG4112	unkown
BAMF_RS29695	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS29705	COG0464	growth
BAMF_RS29710	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAMF_RS29715	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BAMF_RS29720	COG0789	Transcriptional regulator
BAMF_RS29725	COG0174	glutamine synthetase
BAMF_RS29730	COG0582	viral genome integration into host DNA
BAMF_RS29740	COG1525	nuclease
BAMF_RS29745	COG4282	regulation of fungal-type cell wall biogenesis
BAMF_RS29755	COG5444	nuclease activity
BAMF_RS29780	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMF_RS29790	COG2226	methyltransferase
BAMF_RS29810	COG3848	Pyruvate phosphate dikinase
BAMF_RS29810	COG0574	Belongs to the PEP-utilizing enzyme family
BAMF_RS29820	COG1063	alcohol dehydrogenase
BAMF_RS29830	COG0457	Tetratricopeptide repeat
BAMF_RS29870	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS29885	COG2323	membrane
BAMF_RS29895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS29910	COG2318	DinB family
BAMF_RS29915	COG1064	alcohol dehydrogenase
BAMF_RS29940	COG0456	acetyltransferase
BAMF_RS29975	COG3397	chitin binding
BAMF_RS29990	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS29995	COG2314	TM2 domain
BAMF_RS30000	COG0756	dUTP diphosphatase activity
BAMF_RS30010	COG4195	phage-related replication protein
BAMF_RS30040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMF_RS30050	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BAMF_RS30070	COG0785	Cytochrome C biogenesis protein
BAMF_RS30075	COG2201	protein-glutamate methylesterase activity
BAMF_RS30080	COG4846	Membrane protein involved in cytochrome C biogenesis
BAMF_RS30090	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMF_RS30105	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAMF_RS30110	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS30125	COG0824	Thioesterase
BAMF_RS30135	COG4841	protein insertion into membrane
BAMF_RS30145	COG1832	CoA-binding protein
BAMF_RS30150	COG0187	DNA topoisomerase II activity
BAMF_RS30155	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMF_RS30165	COG1115	amino acid carrier protein
BAMF_RS30195	COG2205	protein histidine kinase activity
BAMF_RS30200	COG0745	RESPONSE REGULATOR receiver
BAMF_RS30210	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMF_RS30235	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS30240	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAMF_RS30245	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAMF_RS30250	COG2124	cytochrome p450
BAMF_RS30270	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMF_RS30280	COG2246	polysaccharide biosynthetic process
BAMF_RS30285	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMF_RS30290	COG0586	Pfam SNARE associated Golgi protein
BAMF_RS30295	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAMF_RS30300	COG1024	Enoyl-CoA hydratase
BAMF_RS30305	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAMF_RS30310	COG0511	ligase activity, forming carbon-carbon bonds
BAMF_RS30315	COG0439	Biotin carboxylase
BAMF_RS30325	COG1960	acyl-CoA dehydrogenase activity
BAMF_RS30330	COG1649	PFAM Uncharacterised BCR, COG1649
BAMF_RS30340	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BAMF_RS30340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS30345	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS30350	COG2027	D-alanyl-D-alanine carboxypeptidase
BAMF_RS30355	COG2017	converts alpha-aldose to the beta-anomer
BAMF_RS30360	COG0534	Mate efflux family protein
BAMF_RS30375	COG0582	viral genome integration into host DNA
BAMF_RS30380	COG0166	Belongs to the GPI family
BAMF_RS30385	COG0405	Gamma-glutamyltransferase
BAMF_RS30390	COG2814	Major facilitator Superfamily
BAMF_RS30395	COG0640	Transcriptional regulator
BAMF_RS30400	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAMF_RS30405	COG0493	'glutamate synthase
BAMF_RS30410	COG0067	glutamate synthase
BAMF_RS30410	COG0069	glutamate synthase activity
BAMF_RS30410	COG0070	glutamate synthase
BAMF_RS30415	COG0583	DNA-binding transcription factor activity
BAMF_RS30420	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAMF_RS30435	COG0300	oxidoreductase activity
BAMF_RS30440	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BAMF_RS30455	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS30465	COG2323	membrane
BAMF_RS30480	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS30520	COG2814	Major facilitator Superfamily
BAMF_RS30525	COG1070	Carbohydrate kinase
BAMF_RS30535	COG0243	molybdopterin cofactor binding
BAMF_RS30565	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMF_RS30570	COG0662	Cupin 2, conserved barrel domain protein
BAMF_RS30570	COG2207	Transcriptional regulator
BAMF_RS30575	COG1309	transcriptional regulator
BAMF_RS30580	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS30590	COG0640	Transcriptional regulator
BAMF_RS30595	COG0741	lytic transglycosylase activity
BAMF_RS30600	COG2322	membrane
BAMF_RS30615	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMF_RS30625	COG1388	LysM domain
BAMF_RS30625	COG3584	3D domain protein
BAMF_RS30630	COG0514	ATP-dependent DNA helicase (RecQ)
BAMF_RS30640	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAMF_RS30645	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMF_RS30660	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMF_RS30690	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS30695	COG1657	PFAM Prenyltransferase squalene oxidase
BAMF_RS30700	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMF_RS30705	COG0733	neurotransmitter:sodium symporter activity
BAMF_RS30710	COG0385	Bile acid
BAMF_RS30715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS30720	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMF_RS30730	COG4548	von Willebrand factor, type A
BAMF_RS30735	COG0714	Associated with various cellular activities
BAMF_RS30740	COG2032	superoxide dismutase activity
BAMF_RS30745	COG0791	NLP P60 protein
BAMF_RS30745	COG1388	LysM domain
BAMF_RS30750	COG1819	glycosyl
BAMF_RS30755	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAMF_RS30760	COG0534	Mate efflux family protein
BAMF_RS30765	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS30770	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMF_RS30775	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMF_RS30785	COG2962	Rard protein
BAMF_RS30800	COG1942	4-Oxalocrotonate Tautomerase
BAMF_RS30810	COG1733	regulation of RNA biosynthetic process
BAMF_RS30815	COG0778	Nitroreductase
BAMF_RS30825	COG0346	lactoylglutathione lyase activity
BAMF_RS30835	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMF_RS30845	COG2723	6-phospho-beta-galactosidase activity
BAMF_RS30850	COG2188	Transcriptional regulator
BAMF_RS30855	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS30855	COG0793	Belongs to the peptidase S41A family
BAMF_RS30870	COG1876	peptidase activity
BAMF_RS30885	COG0671	phosphoesterase, PA-phosphatase related
BAMF_RS30900	COG0346	lactoylglutathione lyase activity
BAMF_RS30915	COG1509	lysine 2,3-aminomutase activity
BAMF_RS30920	COG0456	acetyltransferase
BAMF_RS30925	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMF_RS30930	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAMF_RS30935	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAMF_RS30940	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMF_RS30950	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BAMF_RS30960	COG0456	acetyltransferase
BAMF_RS30965	COG0463	Glycosyl transferase, family 2
BAMF_RS30980	COG4641	Protein conserved in bacteria
BAMF_RS30990	COG1086	Polysaccharide biosynthesis protein
BAMF_RS31015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMF_RS31020	COG1086	Polysaccharide biosynthesis protein
BAMF_RS31035	COG1846	Transcriptional regulator
BAMF_RS31040	COG4698	Protein conserved in bacteria
BAMF_RS31045	COG2755	lipolytic protein G-D-S-L family
BAMF_RS31050	COG1999	signal sequence binding
BAMF_RS31060	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAMF_RS31065	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BAMF_RS31070	COG1272	protein, Hemolysin III
BAMF_RS31075	COG0204	Acyl-transferase
BAMF_RS31080	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAMF_RS31085	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BAMF_RS31095	COG2136	Putative SAM-dependent methyltransferase
BAMF_RS31095	COG2521	methyltransferase
BAMF_RS31110	COG1413	lyase activity
BAMF_RS31115	COG1418	mRNA catabolic process
BAMF_RS31120	COG0386	Belongs to the glutathione peroxidase family
BAMF_RS31130	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAMF_RS31135	COG1278	Cold shock
BAMF_RS31155	COG0328	RNA-DNA hybrid ribonuclease activity
BAMF_RS31160	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BAMF_RS31165	COG0328	RNA-DNA hybrid ribonuclease activity
BAMF_RS31175	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS31185	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMF_RS31190	COG1755	Isoprenylcysteine carboxyl methyltransferase
BAMF_RS31195	COG3424	synthase
BAMF_RS31215	COG2233	PERMEase
BAMF_RS31225	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BAMF_RS31230	COG1199	ATP-dependent helicase activity
BAMF_RS31245	COG0116	Belongs to the methyltransferase superfamily
BAMF_RS31260	COG3359	exonuclease
BAMF_RS31265	COG1111	helicase
BAMF_RS31265	COG1205	dead DEAH box helicase
BAMF_RS31270	COG2190	(PTS) system
BAMF_RS31315	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMF_RS31315	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMF_RS31325	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAMF_RS31330	COG3935	DnaD domain protein
BAMF_RS31340	COG0436	Aminotransferase
BAMF_RS31345	COG5353	protein conserved in bacteria
BAMF_RS31350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAMF_RS31350	COG1199	ATP-dependent helicase activity
BAMF_RS31380	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS31385	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMF_RS31400	COG1694	Mazg nucleotide pyrophosphohydrolase
BAMF_RS31405	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS31410	COG2140	Oxalate decarboxylase
BAMF_RS31420	COG4347	Protein of unknown function (DUF1405)
BAMF_RS31425	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAMF_RS31425	COG2010	Cytochrome c
BAMF_RS31430	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAMF_RS31435	COG0723	plastoquinol--plastocyanin reductase activity
BAMF_RS31450	COG0457	Tetratricopeptide repeat
BAMF_RS31460	COG0287	Prephenate dehydrogenase
BAMF_RS31495	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAMF_RS31500	COG4401	Chorismate mutase type I
BAMF_RS31515	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAMF_RS31520	COG0105	UTP biosynthetic process
BAMF_RS31525	COG0142	geranyltranstransferase activity
BAMF_RS31535	COG0142	geranyltranstransferase activity
BAMF_RS31550	COG0776	regulation of translation
BAMF_RS31555	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMF_RS31590	COG0539	negative regulation of cytoplasmic translation
BAMF_RS31600	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BAMF_RS31605	COG2959	enzyme of heme biosynthesis
BAMF_RS31610	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS31610	COG3773	Cell wall hydrolase
BAMF_RS31615	COG2339	peptidase activity
BAMF_RS31620	COG0492	ferredoxin-NADP+ reductase activity
BAMF_RS31625	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMF_RS31630	COG4862	establishment of competence for transformation
BAMF_RS31635	COG1408	metallophosphoesterase
BAMF_RS31645	COG1388	LysM domain
BAMF_RS31650	COG1266	CAAX protease self-immunity
BAMF_RS31655	COG0514	ATP-dependent DNA helicase (RecQ)
BAMF_RS31660	COG4955	Helix-turn-helix domain
BAMF_RS31665	COG1141	Ferredoxin
BAMF_RS31670	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BAMF_RS31675	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAMF_RS31685	COG1595	DNA-templated transcription, initiation
BAMF_RS31690	COG5002	protein histidine kinase activity
BAMF_RS31695	COG0745	RESPONSE REGULATOR receiver
BAMF_RS31700	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMF_RS31705	COG1333	cytochrome c biogenesis protein
BAMF_RS31710	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS31715	COG1187	pseudouridine synthase activity
BAMF_RS31720	COG0700	Nucleoside recognition
BAMF_RS31725	COG2715	membrane protein required for spore maturation
BAMF_RS31730	COG1686	Belongs to the peptidase S11 family
BAMF_RS31750	COG1547	Domain of unknown function (DUF309)
BAMF_RS31755	COG0456	acetyltransferase
BAMF_RS31760	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BAMF_RS31765	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAMF_RS31765	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BAMF_RS31770	COG0307	riboflavin synthase, alpha
BAMF_RS31775	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMF_RS31775	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMF_RS31785	COG0681	Belongs to the peptidase S26 family
BAMF_RS31795	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAMF_RS31800	COG4086	secreted protein
BAMF_RS31805	COG0019	diaminopimelate decarboxylase activity
BAMF_RS31810	COG0697	spore germination
BAMF_RS31825	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS31840	COG1191	sigma factor activity
BAMF_RS31850	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS31855	COG1686	Belongs to the peptidase S11 family
BAMF_RS31860	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BAMF_RS31865	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BAMF_RS31870	COG4974	Belongs to the 'phage' integrase family
BAMF_RS31880	COG0735	belongs to the Fur family
BAMF_RS31885	COG1300	Membrane
BAMF_RS31900	COG0281	malic enzyme
BAMF_RS31905	COG1757	Na H antiporter
BAMF_RS31910	COG1027	Aspartate ammonia-lyase
BAMF_RS31915	COG0252	asparaginase activity
BAMF_RS31920	COG1396	sequence-specific DNA binding
BAMF_RS31925	COG1379	DNA repair
BAMF_RS31930	COG0494	nUDIX hydrolase
BAMF_RS31940	COG0667	Aldo Keto reductase
BAMF_RS31960	COG4918	Iron-sulphur cluster biosynthesis
BAMF_RS31965	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAMF_RS31965	COG0456	acetyltransferase
BAMF_RS31970	COG0456	acetyltransferase
BAMF_RS31975	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMF_RS31990	COG0628	permease
BAMF_RS32000	COG3048	D-serine ammonia-lyase activity
BAMF_RS32005	COG0300	oxidoreductase activity
BAMF_RS32010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS32015	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMF_RS32040	COG0596	Alpha beta hydrolase
BAMF_RS32055	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAMF_RS32060	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BAMF_RS32075	COG0706	membrane insertase activity
BAMF_RS32080	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAMF_RS32085	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAMF_RS32090	COG0346	lactoylglutathione lyase activity
BAMF_RS32095	COG1376	ErfK ybiS ycfS ynhG family protein
BAMF_RS32100	COG4129	membrane
BAMF_RS32105	COG1126	abc transporter atp-binding protein
BAMF_RS32110	COG0765	amino acid transport
BAMF_RS32115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS32125	COG1597	lipid kinase activity
BAMF_RS32130	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMF_RS32135	COG0022	dehydrogenase e1 component
BAMF_RS32140	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMF_RS32145	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMF_RS32150	COG3426	butyrate kinase activity
BAMF_RS32155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMF_RS32160	COG0280	phosphate acetyltransferase
BAMF_RS32165	COG3290	protein histidine kinase activity
BAMF_RS32165	COG3829	transcription factor binding
BAMF_RS32175	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BAMF_RS32180	COG2079	MmgE PrpD family protein
BAMF_RS32185	COG0372	Belongs to the citrate synthase family
BAMF_RS32190	COG1960	acyl-CoA dehydrogenase activity
BAMF_RS32200	COG0183	Belongs to the thiolase family
BAMF_RS32205	COG0584	glycerophosphoryl diester phosphodiesterase
BAMF_RS32210	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS32230	COG1902	pentaerythritol trinitrate reductase activity
BAMF_RS32245	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMF_RS32250	COG0745	RESPONSE REGULATOR receiver
BAMF_RS32255	COG0750	zinc metalloprotease
BAMF_RS32260	COG0497	DNA recombination
BAMF_RS32270	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BAMF_RS32280	COG0142	geranyltranstransferase activity
BAMF_RS32290	COG1570	exodeoxyribonuclease VII activity
BAMF_RS32305	COG1302	Protein conserved in bacteria
BAMF_RS32310	COG0439	Biotin carboxylase
BAMF_RS32315	COG0511	ligase activity, forming carbon-carbon bonds
BAMF_RS32355	COG3854	ATPases associated with a variety of cellular activities
BAMF_RS32370	COG0006	proline dipeptidase activity
BAMF_RS32380	COG3872	metal-dependent enzyme
BAMF_RS32390	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMF_RS32405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMF_RS32425	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMF_RS32440	COG1396	sequence-specific DNA binding
BAMF_RS32450	COG0681	Belongs to the peptidase S26 family
BAMF_RS32475	COG4940	Competence protein ComGF
BAMF_RS32485	COG4970	Tfp pilus assembly protein FimT
BAMF_RS32490	COG4537	Required for transformation and DNA binding
BAMF_RS32495	COG1459	type II secretion system
BAMF_RS32500	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BAMF_RS32505	COG0598	Magnesium transport protein CorA
BAMF_RS32510	COG1253	flavin adenine dinucleotide binding
BAMF_RS32515	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS32525	COG1393	Belongs to the ArsC family
BAMF_RS32535	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS32545	COG0011	TIGRFAM Protein of
BAMF_RS32555	COG2866	Carboxypeptidase
BAMF_RS32560	COG1940	carbohydrate kinase activity
BAMF_RS32565	COG4483	Protein conserved in bacteria
BAMF_RS32570	COG1757	Na H antiporter
BAMF_RS32575	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAMF_RS32585	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAMF_RS32590	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMF_RS32595	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMF_RS32600	COG0581	inorganic phosphate transmembrane transporter activity
BAMF_RS32605	COG0573	inorganic phosphate transmembrane transporter activity
BAMF_RS32610	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAMF_RS32615	COG0768	penicillin binding
BAMF_RS32620	COG0477	Major facilitator Superfamily
BAMF_RS32625	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMF_RS32630	COG2839	Protein conserved in bacteria
BAMF_RS32635	COG5521	maltodextrose utilization protein MalA
BAMF_RS32640	COG1388	LysM domain
BAMF_RS32650	COG4709	membrane
BAMF_RS32655	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BAMF_RS32660	COG0735	belongs to the Fur family
BAMF_RS32665	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS32680	COG0513	Belongs to the DEAD box helicase family
BAMF_RS32695	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAMF_RS32700	COG2384	SAM-dependent methyltransferase
BAMF_RS32705	COG2010	Cytochrome c
BAMF_RS32710	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAMF_RS32715	COG0358	DNA primase activity
BAMF_RS32730	COG0517	IMP dehydrogenase activity
BAMF_RS32735	COG0751	glycine-tRNA ligase activity
BAMF_RS32750	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAMF_RS32755	COG0295	cytidine deaminase activity
BAMF_RS32760	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAMF_RS32770	COG1480	7TM receptor with intracellular HD hydrolase
BAMF_RS32775	COG1702	phosphate starvation-inducible protein PhoH
BAMF_RS32780	COG0561	phosphatase activity
BAMF_RS32795	COG4864	UPF0365 protein
BAMF_RS32800	COG1030	water channel activity
BAMF_RS32805	COG1610	YqeY-like protein
BAMF_RS32815	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAMF_RS32820	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAMF_RS32825	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAMF_RS32855	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMF_RS32870	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS32885	COG1466	dna polymerase III delta subunit
BAMF_RS32895	COG0658	competence protein
BAMF_RS32895	COG2333	competence protein COMEC
BAMF_RS32900	COG2131	deaminase
BAMF_RS32905	COG1596	polysaccharide export
BAMF_RS32905	COG1555	photosystem II stabilization
BAMF_RS32910	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMF_RS32915	COG2226	methyltransferase
BAMF_RS32920	COG0799	negative regulation of ribosome biogenesis
BAMF_RS32925	COG1713	HD superfamily hydrolase involved in NAD metabolism
BAMF_RS32935	COG1534	Rna-binding protein
BAMF_RS32940	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BAMF_RS32945	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAMF_RS32950	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAMF_RS32960	COG2755	lipolytic protein G-D-S-L family
BAMF_RS32970	COG0398	Pfam SNARE associated Golgi protein
BAMF_RS33015	COG0512	Glutamine amidotransferase of anthranilate synthase
BAMF_RS33040	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BAMF_RS33055	COG2378	regulation of single-species biofilm formation
BAMF_RS33060	COG0693	protein deglycase activity
BAMF_RS33105	COG3628	GPW Gp25 family protein
BAMF_RS33110	COG1794	racemase activity, acting on amino acids and derivatives
BAMF_RS33120	COG0656	L-ascorbic acid biosynthetic process
BAMF_RS33155	COG0563	adenylate kinase activity
BAMF_RS33165	COG2814	Major facilitator Superfamily
BAMF_RS33170	COG0456	acetyltransferase
BAMF_RS33175	COG2318	DinB family
BAMF_RS33185	COG0561	phosphatase activity
BAMF_RS33200	COG1482	cell wall glycoprotein biosynthetic process
BAMF_RS33205	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMF_RS33205	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMF_RS33205	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS33210	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS33210	COG3711	transcriptional antiterminator
BAMF_RS33220	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAMF_RS33225	COG0583	DNA-binding transcription factor activity
BAMF_RS33230	COG2814	Major facilitator Superfamily
BAMF_RS33235	COG2124	cytochrome p450
BAMF_RS33235	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMF_RS33240	COG1309	transcriptional regulator
BAMF_RS33245	COG2226	methyltransferase
BAMF_RS33255	COG2116	formate transmembrane transporter activity
BAMF_RS33260	COG5609	conserved protein (DUF2294)
BAMF_RS33265	COG3383	formate dehydrogenase (NAD+) activity
BAMF_RS33270	COG2427	Protein of unknown function (DUF1641)
BAMF_RS33280	COG0626	cystathionine gamma-synthase activity
BAMF_RS33285	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMF_RS33310	COG0768	penicillin binding
BAMF_RS33325	COG0826	peptidase U32
BAMF_RS33330	COG0826	peptidase U32
BAMF_RS33335	COG4122	O-methyltransferase activity
BAMF_RS33340	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAMF_RS33365	COG0628	permease
BAMF_RS33370	COG1126	abc transporter atp-binding protein
BAMF_RS33375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS33380	COG0765	amino acid transport
BAMF_RS33385	COG0765	amino acid transport
BAMF_RS33395	COG3881	PFAM PRC-barrel domain
BAMF_RS33400	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BAMF_RS33405	COG0457	Tetratricopeptide repeat
BAMF_RS33415	COG1104	cysteine desulfurase activity
BAMF_RS33420	COG1959	2 iron, 2 sulfur cluster binding
BAMF_RS33425	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAMF_RS33430	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAMF_RS33450	COG4991	sh3 domain protein
BAMF_RS33450	COG3103	Sh3 type 3 domain protein
BAMF_RS33450	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS33455	COG1490	D-aminoacyl-tRNA deacylase activity
BAMF_RS33460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAMF_RS33470	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BAMF_RS33470	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAMF_RS33475	COG5416	Lipopolysaccharide assembly protein A domain
BAMF_RS33480	COG0490	domain, Protein
BAMF_RS33485	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMF_RS33485	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMF_RS33495	COG2244	polysaccharide biosynthetic process
BAMF_RS33500	COG2323	membrane
BAMF_RS33510	COG1862	Preprotein translocase
BAMF_RS33550	COG1388	LysM domain
BAMF_RS33560	COG0157	Belongs to the NadC ModD family
BAMF_RS33565	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BAMF_RS33570	COG1104	cysteine desulfurase activity
BAMF_RS33575	COG1827	regulation of RNA biosynthetic process
BAMF_RS33580	COG0077	Prephenate dehydratase
BAMF_RS33595	COG3290	protein histidine kinase activity
BAMF_RS33600	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BAMF_RS33605	COG2868	ribosomal protein
BAMF_RS33615	COG1994	Peptidase M50
BAMF_RS33620	COG0739	heme binding
BAMF_RS33625	COG2894	cell division
BAMF_RS33630	COG0850	regulation of cytokinetic process
BAMF_RS33635	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BAMF_RS33645	COG1077	Cell shape determining protein MreB Mrl
BAMF_RS33665	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAMF_RS33670	COG0285	dihydrofolate synthase activity
BAMF_RS33675	COG0525	valine-tRNA ligase activity
BAMF_RS33685	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMF_RS33690	COG1388	LysM domain
BAMF_RS33700	COG0113	porphobilinogen synthase activity
BAMF_RS33705	COG1587	Uroporphyrinogen-III synthase
BAMF_RS33715	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMF_RS33735	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BAMF_RS33740	COG1067	ATP-dependent peptidase activity
BAMF_RS33740	COG0470	DNA polymerase III
BAMF_RS33755	COG0457	Tetratricopeptide repeat
BAMF_RS33755	COG1477	protein flavinylation
BAMF_RS33770	COG0473	3-isopropylmalate dehydrogenase activity
BAMF_RS33785	COG0440	acetolactate synthase activity
BAMF_RS33790	COG0028	Belongs to the TPP enzyme family
BAMF_RS33815	COG0622	Phosphoesterase
BAMF_RS33820	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BAMF_RS33830	COG5401	PFAM Sporulation and spore germination
BAMF_RS33840	COG1846	Transcriptional regulator
BAMF_RS33845	COG2197	response regulator
BAMF_RS33850	COG0824	Thioesterase
BAMF_RS33855	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAMF_RS33860	COG1053	succinate dehydrogenase
BAMF_RS33865	COG2009	succinate dehydrogenase
BAMF_RS33870	COG1719	4-vinyl reductase, 4VR
BAMF_RS33875	COG0527	aspartate kinase activity
BAMF_RS33885	COG3118	belongs to the thioredoxin family
BAMF_RS33890	COG3534	alpha-L-arabinofuranosidase
BAMF_RS33895	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAMF_RS33900	COG2086	electron transfer activity
BAMF_RS33905	COG1024	Enoyl-CoA hydratase
BAMF_RS33910	COG1309	transcriptional regulator
BAMF_RS33915	COG0318	PFAM AMP-dependent synthetase and ligase
BAMF_RS33925	COG3766	membrane
BAMF_RS33935	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMF_RS33935	COG1796	DNA polymerase
BAMF_RS33940	COG1286	toxin biosynthetic process
BAMF_RS33955	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMF_RS33955	COG0072	phenylalanine-tRNA ligase activity
BAMF_RS33960	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BAMF_RS33965	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMF_RS33975	COG3835	regulator
BAMF_RS33980	COG0277	FAD linked oxidase domain protein
BAMF_RS33985	COG0247	lactate metabolic process
BAMF_RS33990	COG1966	Carbon starvation protein
BAMF_RS33995	COG3534	alpha-L-arabinofuranosidase
BAMF_RS34000	COG0395	ABC-type sugar transport system, permease component
BAMF_RS34005	COG1175	transmembrane transport
BAMF_RS34010	COG1653	transport
BAMF_RS34020	COG0647	UMP catabolic process
BAMF_RS34025	COG0235	Class ii aldolase
BAMF_RS34030	COG1069	ribulokinase activity
BAMF_RS34035	COG2160	L-arabinose isomerase activity
BAMF_RS34040	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMF_RS34045	COG1363	Peptidase, m42
BAMF_RS34055	COG3326	Membrane
BAMF_RS34060	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BAMF_RS34070	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAMF_RS34075	COG1346	cytolysis
BAMF_RS34080	COG1380	Effector of murein hydrolase LrgA
BAMF_RS34085	COG3279	Response regulator of the LytR AlgR family
BAMF_RS34090	COG3275	phosphorelay sensor kinase activity
BAMF_RS34095	COG1011	Hydrolase
BAMF_RS34110	COG0398	Pfam SNARE associated Golgi protein
BAMF_RS34115	COG1484	DNA-dependent DNA replication
BAMF_RS34120	COG3611	Membrane attachment protein
BAMF_RS34135	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMF_RS34140	COG1733	regulation of RNA biosynthetic process
BAMF_RS34145	COG2814	Major facilitator Superfamily
BAMF_RS34150	COG0656	L-ascorbic acid biosynthetic process
BAMF_RS34155	COG0237	dephospho-CoA kinase activity
BAMF_RS34160	COG1971	Probably functions as a manganese efflux pump
BAMF_RS34165	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAMF_RS34170	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS34170	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS34175	COG5002	protein histidine kinase activity
BAMF_RS34180	COG0745	RESPONSE REGULATOR receiver
BAMF_RS34190	COG0538	isocitrate dehydrogenase activity
BAMF_RS34195	COG0372	Belongs to the citrate synthase family
BAMF_RS34205	COG0628	permease
BAMF_RS34210	COG3030	protein affecting phage T7 exclusion by the F plasmid
BAMF_RS34215	COG0469	pyruvate kinase activity
BAMF_RS34240	COG0281	malic enzyme
BAMF_RS34245	COG0587	DNA-directed DNA polymerase activity
BAMF_RS34265	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BAMF_RS34275	COG4109	DRTGG domain
BAMF_RS34285	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS34300	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAMF_RS34310	COG0827	DNA restriction-modification system
BAMF_RS34315	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BAMF_RS34320	COG3874	Sporulation protein YtfJ
BAMF_RS34330	COG1714	RDD family
BAMF_RS34335	COG0616	signal peptide processing
BAMF_RS34340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMF_RS34345	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BAMF_RS34350	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMF_RS34365	COG1104	cysteine desulfurase activity
BAMF_RS34370	COG1114	Component of the transport system for branched-chain amino acids
BAMF_RS34380	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMF_RS34385	COG1309	transcriptional regulator
BAMF_RS34390	COG1956	GAF domain-containing protein
BAMF_RS34395	COG2199	diguanylate cyclase activity
BAMF_RS34395	COG2203	Gaf domain
BAMF_RS34405	COG1017	nitric oxide dioxygenase activity
BAMF_RS34405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAMF_RS34415	COG0693	protein deglycase activity
BAMF_RS34430	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMF_RS34435	COG1378	Sugar-specific transcriptional regulator TrmB
BAMF_RS34440	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BAMF_RS34455	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMF_RS34460	COG0454	-acetyltransferase
BAMF_RS34465	COG0517	IMP dehydrogenase activity
BAMF_RS34470	COG0123	including yeast histone deacetylase and acetoin utilization protein
BAMF_RS34475	COG1360	Flagellar Motor Protein
BAMF_RS34480	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMF_RS34485	COG1609	Transcriptional regulator
BAMF_RS34490	COG1605	Chorismate mutase
BAMF_RS34490	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BAMF_RS34495	COG3118	belongs to the thioredoxin family
BAMF_RS34500	COG4980	gas vesicle protein
BAMF_RS34505	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BAMF_RS34515	COG1674	ftsk spoiiie
BAMF_RS34520	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMF_RS34530	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS34540	COG1363	Peptidase, m42
BAMF_RS34545	COG5584	Small secreted protein
BAMF_RS34555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMF_RS34570	COG0510	thiamine kinase activity
BAMF_RS34575	COG1597	lipid kinase activity
BAMF_RS34585	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BAMF_RS34590	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMF_RS34595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMF_RS34600	COG2252	PERMEase
BAMF_RS34605	COG4473	ABC transporter
BAMF_RS34610	COG1131	(ABC) transporter
BAMF_RS34615	COG1349	DNA-binding transcription factor activity
BAMF_RS34620	COG1187	pseudouridine synthase activity
BAMF_RS34625	COG2244	polysaccharide biosynthetic process
BAMF_RS34630	COG2081	HI0933 family
BAMF_RS34635	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAMF_RS34650	COG1653	transport
BAMF_RS34655	COG1175	transmembrane transport
BAMF_RS34660	COG0395	ABC-type sugar transport system, permease component
BAMF_RS34665	COG1486	melibiose metabolic process
BAMF_RS34675	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMF_RS34690	COG2202	Pas domain
BAMF_RS34690	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMF_RS34695	COG2814	Major facilitator Superfamily
BAMF_RS34705	COG0577	efflux transmembrane transporter activity
BAMF_RS34710	COG1136	(ABC) transporter
BAMF_RS34715	COG2205	protein histidine kinase activity
BAMF_RS34720	COG0745	RESPONSE REGULATOR receiver
BAMF_RS34725	COG0577	efflux transmembrane transporter activity
BAMF_RS34730	COG1136	(ABC) transporter
BAMF_RS34750	COG1131	(ABC) transporter
BAMF_RS34755	COG1725	Transcriptional regulator
BAMF_RS34770	COG1242	4 iron, 4 sulfur cluster binding
BAMF_RS34775	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BAMF_RS34790	COG2267	carboxylic ester hydrolase activity
BAMF_RS34795	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BAMF_RS34800	COG1113	amino acid transport
BAMF_RS34805	COG0367	asparagine synthase
BAMF_RS34825	COG1506	peptidase
BAMF_RS34830	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMF_RS34835	COG1116	anion transmembrane transporter activity
BAMF_RS34840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMF_RS34845	COG0494	nUDIX hydrolase
BAMF_RS34850	COG4824	toxin secretion phage lysis holin
BAMF_RS34855	COG0783	Belongs to the Dps family
BAMF_RS34880	COG0288	reversible hydration of carbon dioxide
BAMF_RS34890	COG1271	oxidase subunit
BAMF_RS34895	COG1294	oxidase, subunit
BAMF_RS34900	COG4948	Mandelate Racemase Muconate Lactonizing
BAMF_RS34910	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAMF_RS34915	COG0596	Alpha beta hydrolase
BAMF_RS34925	COG1169	isochorismate synthase
BAMF_RS34930	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMF_RS34935	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BAMF_RS35070	COG3859	Proton-coupled thiamine transporter YuaJ
BAMF_RS35075	COG2268	Band 7 protein
BAMF_RS35080	COG1585	Membrane protein implicated in regulation of membrane protease activity
BAMF_RS35085	COG2318	DinB family
BAMF_RS35095	COG1454	alcohol dehydrogenase
BAMF_RS35100	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS35105	COG1510	regulation of RNA biosynthetic process
BAMF_RS35115	COG0569	domain protein
BAMF_RS35120	COG1705	Flagellar rod assembly protein muramidase FlgJ
BAMF_RS35125	COG1017	nitric oxide dioxygenase activity
BAMF_RS35125	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAMF_RS35145	COG0457	Tetratricopeptide repeat
BAMF_RS35200	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS35205	COG4824	toxin secretion phage lysis holin
BAMF_RS35225	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS35240	COG3953	SLT domain
BAMF_RS35240	COG5412	phage tail tape measure protein
BAMF_RS35375	COG0582	viral genome integration into host DNA
BAMF_RS35390	COG0628	permease
BAMF_RS35395	COG0673	inositol 2-dehydrogenase activity
BAMF_RS35400	COG0693	protein deglycase activity
BAMF_RS35405	COG0840	transmembrane signaling receptor activity
BAMF_RS35410	COG0840	transmembrane signaling receptor activity
BAMF_RS35415	COG0840	transmembrane signaling receptor activity
BAMF_RS35420	COG0840	transmembrane signaling receptor activity
BAMF_RS35435	COG2070	2-Nitropropane dioxygenase
BAMF_RS35440	COG0366	Alpha amylase catalytic
BAMF_RS35445	COG1253	flavin adenine dinucleotide binding
BAMF_RS35450	COG2738	Putative neutral zinc metallopeptidase
BAMF_RS35465	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAMF_RS35485	COG1979	alcohol dehydrogenase
BAMF_RS35490	COG1979	alcohol dehydrogenase
BAMF_RS35495	COG2155	Conserved Protein
BAMF_RS35500	COG1098	S1 RNA binding domain
BAMF_RS35505	COG0436	Aminotransferase
BAMF_RS35510	COG1522	sequence-specific DNA binding
BAMF_RS35515	COG2267	carboxylic ester hydrolase activity
BAMF_RS35525	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BAMF_RS35530	COG2205	protein histidine kinase activity
BAMF_RS35540	COG5018	Exonuclease
BAMF_RS35545	COG2814	Major facilitator Superfamily
BAMF_RS35550	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMF_RS35555	COG3011	Protein conserved in bacteria
BAMF_RS35565	COG3290	protein histidine kinase activity
BAMF_RS35570	COG4565	transcriptional regulatory protein
BAMF_RS35575	COG1744	ABC transporter substrate-binding protein PnrA-like
BAMF_RS35580	COG3845	ABC transporter
BAMF_RS35585	COG4603	Belongs to the binding-protein-dependent transport system permease family
BAMF_RS35590	COG1079	Belongs to the binding-protein-dependent transport system permease family
BAMF_RS35600	COG2111	Na H antiporter
BAMF_RS35600	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAMF_RS35605	COG2111	Na H antiporter
BAMF_RS35610	COG1006	Multisubunit Na H antiporter MnhC subunit
BAMF_RS35615	COG0651	ATP synthesis coupled electron transport
BAMF_RS35620	COG1863	multisubunit Na H antiporter MnhE subunit
BAMF_RS35625	COG2212	antiporter activity
BAMF_RS35630	COG1320	monovalent cation:proton antiporter activity
BAMF_RS35635	COG2050	protein possibly involved in aromatic compounds catabolism
BAMF_RS35640	COG2197	response regulator
BAMF_RS35645	COG4585	Histidine kinase
BAMF_RS35655	COG0142	geranyltranstransferase activity
BAMF_RS35670	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BAMF_RS35675	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAMF_RS35680	COG1335	isochorismatase
BAMF_RS35685	COG5506	Protein of unknown function (DUF1694)
BAMF_RS35700	COG0628	permease
BAMF_RS35710	COG1418	mRNA catabolic process
BAMF_RS35715	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS35725	COG1511	domain protein
BAMF_RS35730	COG1674	ftsk spoiiie
BAMF_RS35730	COG0433	COG0433 Predicted ATPase
BAMF_RS35735	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMF_RS35740	COG5417	Belongs to the EsaB family
BAMF_RS35745	COG4842	Belongs to the WXG100 family
BAMF_RS35750	COG2508	Transcriptional regulator
BAMF_RS35750	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BAMF_RS35755	COG0686	Belongs to the AlaDH PNT family
BAMF_RS35760	COG5634	Uncharacterized conserved protein (DUF2278)
BAMF_RS35765	COG3251	PFAM MbtH domain protein
BAMF_RS35770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMF_RS35775	COG1535	isochorismatase
BAMF_RS35775	COG3433	isochorismatase activity
BAMF_RS35780	COG1021	2,3-dihydroxybenzoate-AMP ligase
BAMF_RS35785	COG1169	isochorismate synthase
BAMF_RS35790	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS35795	COG2819	hydrolase of the alpha beta superfamily
BAMF_RS35800	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAMF_RS35805	COG1268	BioY protein
BAMF_RS35810	COG2056	Na+-H+ antiporter family
BAMF_RS35820	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BAMF_RS35825	COG3584	3D domain protein
BAMF_RS35840	COG1252	NADH dehydrogenase
BAMF_RS35865	COG1131	(ABC) transporter
BAMF_RS35890	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BAMF_RS35895	COG0316	Belongs to the HesB IscA family
BAMF_RS35905	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMF_RS35915	COG1252	NADH dehydrogenase
BAMF_RS35920	COG4837	Protein of unknown function (DUF1462)
BAMF_RS35925	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BAMF_RS35940	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BAMF_RS35945	COG0460	homoserine dehydrogenase
BAMF_RS35950	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMF_RS35955	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAMF_RS35960	COG0647	UMP catabolic process
BAMF_RS35965	COG2445	Protein of unknown function DUF86
BAMF_RS35970	COG4470	Protein conserved in bacteria
BAMF_RS35980	COG0739	heme binding
BAMF_RS35990	COG0737	Belongs to the 5'-nucleotidase family
BAMF_RS35995	COG0730	response to heat
BAMF_RS36000	COG1801	Protein of unknown function DUF72
BAMF_RS36015	COG2508	Transcriptional regulator
BAMF_RS36025	COG2814	Major facilitator Superfamily
BAMF_RS36030	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BAMF_RS36035	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMF_RS36040	COG2356	endonuclease I
BAMF_RS36045	COG3842	ATPase activity
BAMF_RS36050	COG2188	Transcriptional regulator
BAMF_RS36055	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMF_RS36060	COG0395	ABC-type sugar transport system, permease component
BAMF_RS36065	COG1175	transmembrane transport
BAMF_RS36070	COG1653	transport
BAMF_RS36075	COG2222	sugar isomerase
BAMF_RS36080	COG0789	Transcriptional regulator
BAMF_RS36105	COG0322	excinuclease ABC activity
BAMF_RS36110	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMF_RS36125	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS36145	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS36145	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS36150	COG4824	toxin secretion phage lysis holin
BAMF_RS36170	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMF_RS36175	COG1705	Flagellar rod assembly protein muramidase FlgJ
BAMF_RS36185	COG5412	phage tail tape measure protein
BAMF_RS36185	COG3953	SLT domain
BAMF_RS36285	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS36285	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMF_RS36340	COG1396	sequence-specific DNA binding
BAMF_RS36355	COG0719	Fe-S assembly protein
BAMF_RS36360	COG0822	iron-sulfur transferase activity
BAMF_RS36365	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAMF_RS36370	COG0719	Fe-S assembly protein
BAMF_RS36375	COG0396	ATPase activity
BAMF_RS36385	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAMF_RS36390	COG1464	Belongs to the NlpA lipoprotein family
BAMF_RS36395	COG2011	ABC-type metal ion transport system permease component
BAMF_RS36400	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAMF_RS36410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMF_RS36430	COG1393	Belongs to the ArsC family
BAMF_RS36435	COG1960	acyl-CoA dehydrogenase activity
BAMF_RS36440	COG0183	Belongs to the thiolase family
BAMF_RS36445	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAMF_RS36445	COG1024	Enoyl-CoA hydratase
BAMF_RS36460	COG5577	PFAM Coat F domain
BAMF_RS36465	COG1846	Transcriptional regulator
BAMF_RS36470	COG0477	Major facilitator Superfamily
BAMF_RS36495	COG1120	ATPase activity
BAMF_RS36510	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS36515	COG0783	Belongs to the Dps family
BAMF_RS36520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMF_RS36525	COG0745	RESPONSE REGULATOR receiver
BAMF_RS36530	COG2205	protein histidine kinase activity
BAMF_RS36530	COG2770	Histidine kinase
BAMF_RS36535	COG1309	transcriptional regulator
BAMF_RS36540	COG0114	fumarate hydratase activity
BAMF_RS36550	COG0697	spore germination
BAMF_RS36555	COG0814	amino acid
BAMF_RS36565	COG2197	response regulator
BAMF_RS36570	COG4585	Histidine kinase
BAMF_RS36575	COG4758	membrane
BAMF_RS36580	COG3595	metallopeptidase activity
BAMF_RS36585	COG1842	Phage shock protein A
BAMF_RS36590	COG4758	membrane
BAMF_RS36595	COG2814	Major facilitator Superfamily
BAMF_RS36600	COG2096	Adenosyltransferase
BAMF_RS36605	COG1120	ATPase activity
BAMF_RS36610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS36615	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMF_RS36620	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS36625	COG3386	PFAM SMP-30 Gluconolaconase
BAMF_RS36630	COG2205	protein histidine kinase activity
BAMF_RS36635	COG0745	RESPONSE REGULATOR receiver
BAMF_RS36645	COG1191	sigma factor activity
BAMF_RS36650	COG2140	Oxalate decarboxylase
BAMF_RS36660	COG1120	ATPase activity
BAMF_RS36665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS36670	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS36675	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMF_RS36680	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAMF_RS36685	COG0531	amino acid
BAMF_RS36695	COG1988	membrane-bound metal-dependent
BAMF_RS36700	COG1368	sulfuric ester hydrolase activity
BAMF_RS36705	COG1368	sulfuric ester hydrolase activity
BAMF_RS36710	COG1910	domain protein
BAMF_RS36715	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAMF_RS36720	COG4149	molybdate abc transporter
BAMF_RS36725	COG2197	response regulator
BAMF_RS36735	COG1131	(ABC) transporter
BAMF_RS36745	COG0842	Transport permease protein
BAMF_RS36750	COG0656	L-ascorbic acid biosynthetic process
BAMF_RS36770	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMF_RS36780	COG2860	membrane
BAMF_RS36790	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAMF_RS36795	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAMF_RS36800	COG2217	Heavy metal translocating P-type atpase
BAMF_RS36805	COG2217	Heavy metal translocating P-type atpase
BAMF_RS36810	COG2608	mercury ion transmembrane transporter activity
BAMF_RS36815	COG1937	Protein conserved in bacteria
BAMF_RS36820	COG0673	inositol 2-dehydrogenase activity
BAMF_RS36830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS36835	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BAMF_RS36840	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS36845	COG1126	abc transporter atp-binding protein
BAMF_RS36850	COG0765	amino acid transport
BAMF_RS36855	COG0765	amino acid transport
BAMF_RS36860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS36865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMF_RS36870	COG0454	-acetyltransferase
BAMF_RS36875	COG0583	DNA-binding transcription factor activity
BAMF_RS36880	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS36885	COG2732	(Barnase) inhibitor
BAMF_RS36895	COG0557	exoribonuclease II activity
BAMF_RS36900	COG1647	Serine aminopeptidase, S33
BAMF_RS36905	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMF_RS36910	COG1476	TRANSCRIPTIONal
BAMF_RS36915	COG1396	sequence-specific DNA binding
BAMF_RS36920	COG1396	sequence-specific DNA binding
BAMF_RS36925	COG1733	regulation of RNA biosynthetic process
BAMF_RS36950	COG1131	(ABC) transporter
BAMF_RS36955	COG1174	glycine betaine transport
BAMF_RS36960	COG1732	Glycine betaine
BAMF_RS36965	COG1174	glycine betaine transport
BAMF_RS36970	COG1125	glycine betaine transport
BAMF_RS36970	COG0517	IMP dehydrogenase activity
BAMF_RS36975	COG1510	regulation of RNA biosynthetic process
BAMF_RS36980	COG1174	glycine betaine transport
BAMF_RS36985	COG1732	Glycine betaine
BAMF_RS36990	COG1174	glycine betaine transport
BAMF_RS36995	COG1125	glycine betaine transport
BAMF_RS36995	COG0517	IMP dehydrogenase activity
BAMF_RS37000	COG1510	regulation of RNA biosynthetic process
BAMF_RS37005	COG2095	MarC family integral membrane protein
BAMF_RS37010	COG3064	Membrane
BAMF_RS37015	COG4640	response to antibiotic
BAMF_RS37020	COG0456	acetyltransferase
BAMF_RS37035	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMF_RS37055	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMF_RS37060	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMF_RS37070	COG2234	aminopeptidase activity
BAMF_RS37090	COG0126	phosphoglycerate kinase activity
BAMF_RS37100	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMF_RS37105	COG2390	Transcriptional regulator
BAMF_RS37110	COG2814	Major facilitator Superfamily
BAMF_RS37115	COG1609	Transcriptional regulator
BAMF_RS37120	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS37130	COG0697	spore germination
BAMF_RS37135	COG1113	amino acid transport
BAMF_RS37140	COG1737	Transcriptional regulator
BAMF_RS37145	COG1070	Carbohydrate kinase
BAMF_RS37170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMF_RS37175	COG2186	Transcriptional regulator
BAMF_RS37180	COG1620	l-lactate permease
BAMF_RS37185	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAMF_RS37195	COG5039	Polysaccharide pyruvyl transferase
BAMF_RS37200	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMF_RS37205	COG0110	maltose O-acetyltransferase activity
BAMF_RS37210	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAMF_RS37215	COG2244	polysaccharide biosynthetic process
BAMF_RS37220	COG1216	Glycosyl transferase, family 2
BAMF_RS37225	COG5039	Polysaccharide pyruvyl transferase
BAMF_RS37230	COG1216	Glycosyl transferase, family 2
BAMF_RS37240	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS37245	COG1215	transferase activity, transferring glycosyl groups
BAMF_RS37250	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS37255	COG1086	Polysaccharide biosynthesis protein
BAMF_RS37260	COG0489	protein tyrosine kinase activity
BAMF_RS37265	COG3944	biosynthesis protein
BAMF_RS37270	COG1396	sequence-specific DNA binding
BAMF_RS37275	COG2272	Belongs to the type-B carboxylesterase lipase family
BAMF_RS37285	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAMF_RS37300	COG2364	Membrane
BAMF_RS37305	COG0456	acetyltransferase
BAMF_RS37310	COG3479	Phenolic acid decarboxylase
BAMF_RS37355	COG2223	nitrite transmembrane transporter activity
BAMF_RS37360	COG1609	Transcriptional regulator
BAMF_RS37370	COG0583	DNA-binding transcription factor activity
BAMF_RS37375	COG2828	Protein conserved in bacteria
BAMF_RS37380	COG0477	Major facilitator Superfamily
BAMF_RS37380	COG2814	Major facilitator Superfamily
BAMF_RS37390	COG1611	Belongs to the LOG family
BAMF_RS37395	COG1694	Mazg nucleotide pyrophosphohydrolase
BAMF_RS37400	COG0659	secondary active sulfate transmembrane transporter activity
BAMF_RS37405	COG0288	reversible hydration of carbon dioxide
BAMF_RS37415	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMF_RS37420	COG4290	ribonuclease
BAMF_RS37425	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BAMF_RS37430	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS37440	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BAMF_RS37450	COG1051	belongs to the nudix hydrolase family
BAMF_RS37455	COG0492	ferredoxin-NADP+ reductase activity
BAMF_RS37460	COG3883	PFAM NLP P60 protein
BAMF_RS37460	COG0791	NLP P60 protein
BAMF_RS37465	COG0457	Tetratricopeptide repeat
BAMF_RS37470	COG5002	protein histidine kinase activity
BAMF_RS37475	COG0745	RESPONSE REGULATOR receiver
BAMF_RS37480	COG1132	(ABC) transporter
BAMF_RS37485	COG0140	phosphoribosyl-ATP diphosphatase activity
BAMF_RS37485	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BAMF_RS37510	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAMF_RS37525	COG4990	cell redox homeostasis
BAMF_RS37530	COG0110	maltose O-acetyltransferase activity
BAMF_RS37550	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BAMF_RS37560	COG2188	Transcriptional regulator
BAMF_RS37565	COG1309	transcriptional regulator
BAMF_RS37570	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAMF_RS37575	COG1950	PFAM Membrane protein of
BAMF_RS37580	COG1983	PspC domain protein
BAMF_RS37585	COG3595	metallopeptidase activity
BAMF_RS37600	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAMF_RS37610	COG4897	Protein conserved in bacteria
BAMF_RS37615	COG0574	Belongs to the PEP-utilizing enzyme family
BAMF_RS37615	COG3848	Pyruvate phosphate dikinase
BAMF_RS37620	COG1309	transcriptional regulator
BAMF_RS37625	COG2814	Major facilitator Superfamily
BAMF_RS37640	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMF_RS37650	COG3409	Peptidoglycan-binding domain 1 protein
BAMF_RS37650	COG0793	Belongs to the peptidase S41A family
BAMF_RS37655	COG3420	alginic acid biosynthetic process
BAMF_RS37660	COG2177	Part of the ABC transporter FtsEX involved in
BAMF_RS37665	COG2884	Cell division ATP-binding protein ftsE
BAMF_RS37670	COG2010	Cytochrome c
BAMF_RS37675	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS37680	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BAMF_RS37690	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAMF_RS37705	COG1516	flagellar protein fliS
BAMF_RS37710	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BAMF_RS37715	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMF_RS37735	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMF_RS37740	COG4786	Flagellar basal body rod
BAMF_RS37740	COG1256	bacterial-type flagellum assembly
BAMF_RS37745	COG3418	PFAM FlgN family protein
BAMF_RS37750	COG2747	anti-sigma28 factor FlgM
BAMF_RS37760	COG1040	competence protein
BAMF_RS37770	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BAMF_RS37775	COG1307	EDD domain protein, DegV family
BAMF_RS37780	COG2197	response regulator
BAMF_RS37785	COG4585	Histidine kinase
BAMF_RS37790	COG1739	Uncharacterized protein family UPF0029
BAMF_RS37795	COG1316	TRANSCRIPTIONal
BAMF_RS37800	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAMF_RS37805	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS37810	COG1215	transferase activity, transferring glycosyl groups
BAMF_RS37815	COG3206	protein involved in exopolysaccharide biosynthesis
BAMF_RS37820	COG3307	-O-antigen
BAMF_RS37825	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMF_RS37830	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS37830	COG0297	glycogen (starch) synthase activity
BAMF_RS37835	COG2244	polysaccharide biosynthetic process
BAMF_RS37845	COG2247	cell wall binding repeat
BAMF_RS37845	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMF_RS37850	COG2385	sporulation resulting in formation of a cellular spore
BAMF_RS37850	COG2247	cell wall binding repeat
BAMF_RS37860	COG1316	TRANSCRIPTIONal
BAMF_RS37865	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAMF_RS37870	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMF_RS37875	COG1134	teichoic acid transport
BAMF_RS37880	COG1682	transport, permease protein
BAMF_RS37885	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMF_RS37890	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS37895	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BAMF_RS37900	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BAMF_RS37905	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMF_RS37910	COG4193	domain, Protein
BAMF_RS37915	COG1482	cell wall glycoprotein biosynthetic process
BAMF_RS37920	COG0697	spore germination
BAMF_RS37925	COG0814	amino acid
BAMF_RS37935	COG1215	transferase activity, transferring glycosyl groups
BAMF_RS37940	COG2814	Major facilitator Superfamily
BAMF_RS37945	COG1316	TRANSCRIPTIONal
BAMF_RS37950	COG0561	phosphatase activity
BAMF_RS37955	COG2433	Pfam Transposase IS66
BAMF_RS37960	COG0791	NLP P60 protein
BAMF_RS37965	COG2843	Capsule synthesis protein
BAMF_RS37975	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BAMF_RS37980	COG0697	spore germination
BAMF_RS37985	COG0814	amino acid
BAMF_RS38000	COG1609	Transcriptional regulator
BAMF_RS38005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMF_RS38015	COG1129	ABC transporter
BAMF_RS38020	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAMF_RS38025	COG1879	ABC-type sugar transport system periplasmic component
BAMF_RS38030	COG3103	Sh3 type 3 domain protein
BAMF_RS38035	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMF_RS38040	COG3527	Alpha-acetolactate decarboxylase
BAMF_RS38045	COG0028	Belongs to the TPP enzyme family
BAMF_RS38050	COG0583	DNA-binding transcription factor activity
BAMF_RS38055	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMF_RS38070	COG5337	Spore coat protein CotH
BAMF_RS38080	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAMF_RS38090	COG0405	Gamma-glutamyltransferase
BAMF_RS38095	COG1522	sequence-specific DNA binding
BAMF_RS38100	COG2059	Chromate
BAMF_RS38105	COG2059	Chromate
BAMF_RS38135	COG5444	nuclease activity
BAMF_RS38150	COG3878	Protein conserved in bacteria
BAMF_RS38155	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMF_RS38160	COG4464	protein tyrosine phosphatase activity
BAMF_RS38165	COG0489	protein tyrosine kinase activity
BAMF_RS38170	COG3944	biosynthesis protein
BAMF_RS38180	COG4715	Zinc finger, swim domain protein
BAMF_RS38185	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMF_RS38190	COG0561	phosphatase activity
BAMF_RS38195	COG1349	DNA-binding transcription factor activity
BAMF_RS38200	COG0629	single-stranded DNA binding
BAMF_RS38225	COG0457	Tetratricopeptide repeat
BAMF_RS38230	COG4786	Flagellar basal body rod
BAMF_RS38235	COG4786	Flagellar basal body rod
BAMF_RS38240	COG1077	Cell shape determining protein MreB Mrl
BAMF_RS38245	COG1609	Transcriptional regulator
BAMF_RS38250	COG1846	Transcriptional regulator
BAMF_RS38255	COG2814	Major facilitator Superfamily
BAMF_RS38260	COG1953	Uracil, thiamine, allantoin
BAMF_RS38265	COG0477	Major facilitator Superfamily
BAMF_RS38270	COG1335	isochorismatase
BAMF_RS38275	COG0004	ammonium transporteR
BAMF_RS38280	COG0347	Belongs to the P(II) protein family
BAMF_RS38285	COG0772	Belongs to the SEDS family
BAMF_RS38290	COG0671	phosphoesterase, PA-phosphatase related
BAMF_RS38300	COG0739	heme binding
BAMF_RS38305	COG1247	-acetyltransferase
BAMF_RS38320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS38335	COG2910	NAD(P)H-binding
BAMF_RS38340	COG1959	2 iron, 2 sulfur cluster binding
BAMF_RS38355	COG0831	urea catabolic process
BAMF_RS38360	COG3237	CsbD-like
BAMF_RS38370	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAMF_RS38375	COG2304	oxidoreductase activity
BAMF_RS38380	COG2304	oxidoreductase activity
BAMF_RS38385	COG2385	sporulation resulting in formation of a cellular spore
BAMF_RS38390	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMF_RS38400	COG4836	Membrane
BAMF_RS38470	COG0698	ribose 5-phosphate isomerase
BAMF_RS38475	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAMF_RS38485	COG0009	L-threonylcarbamoyladenylate synthase
BAMF_RS38490	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BAMF_RS38510	COG2890	protein-(glutamine-N5) methyltransferase activity
BAMF_RS38515	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAMF_RS38520	COG0346	lactoylglutathione lyase activity
BAMF_RS38525	COG0789	Transcriptional regulator
BAMF_RS38530	COG0679	Auxin Efflux Carrier
BAMF_RS38535	COG0281	malic enzyme
BAMF_RS38550	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAMF_RS38555	COG1494	fructose-1,6-bisphosphatase
BAMF_RS38560	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMF_RS38570	COG0191	fructose-bisphosphate aldolase activity
BAMF_RS38575	COG2204	response regulator
BAMF_RS38580	COG4821	SIS domain
BAMF_RS38595	COG0247	lactate metabolic process
BAMF_RS38595	COG2181	nitrate reductase activity
BAMF_RS38600	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS38615	COG1132	(ABC) transporter
BAMF_RS38620	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS38625	COG2181	nitrate reductase activity
BAMF_RS38630	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BAMF_RS38635	COG1140	nitrate reductase beta subunit
BAMF_RS38640	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BAMF_RS38645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMF_RS38660	COG2223	nitrite transmembrane transporter activity
BAMF_RS38670	COG4506	Protein conserved in bacteria
BAMF_RS38685	COG0457	Tetratricopeptide repeat
BAMF_RS38695	COG0010	Belongs to the arginase family
BAMF_RS38700	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAMF_RS38705	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMF_RS38720	COG1994	Peptidase M50
BAMF_RS38725	COG1942	4-Oxalocrotonate Tautomerase
BAMF_RS38730	COG1846	Transcriptional regulator
BAMF_RS38735	COG0531	amino acid
BAMF_RS38740	COG3465	dGTPase activity
BAMF_RS38745	COG1078	dGTPase activity
BAMF_RS38760	COG1695	Transcriptional regulator
BAMF_RS38770	COG1131	(ABC) transporter
BAMF_RS38775	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMF_RS38805	COG0583	DNA-binding transcription factor activity
BAMF_RS38810	COG2855	membrane
BAMF_RS38815	COG0280	phosphate acetyltransferase
BAMF_RS38835	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS38840	COG0436	Aminotransferase
BAMF_RS38850	COG0151	Belongs to the GarS family
BAMF_RS38860	COG1917	Cupin 2, conserved barrel domain protein
BAMF_RS38870	COG2814	Major facilitator Superfamily
BAMF_RS38875	COG2814	Major facilitator Superfamily
BAMF_RS38880	COG0833	amino acid
BAMF_RS38885	COG4187	Peptidase family M20/M25/M40
BAMF_RS38890	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS38895	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMF_RS38905	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
BAMF_RS38910	COG1091	dTDP-4-dehydrorhamnose reductase activity
BAMF_RS38915	COG1088	dTDP-glucose 4,6-dehydratase activity
BAMF_RS38920	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BAMF_RS38925	COG3980	spore coat polysaccharide biosynthesis protein
BAMF_RS38930	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
BAMF_RS38935	COG2089	acid synthase
BAMF_RS38940	COG0456	acetyltransferase
BAMF_RS38945	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMF_RS38950	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMF_RS38955	COG0463	Glycosyl transferase, family 2
BAMF_RS38965	COG2363	Small membrane protein
BAMF_RS38970	COG2233	PERMEase
BAMF_RS38985	COG1216	Glycosyl transferase, family 2
BAMF_RS38995	COG0351	phosphomethylpyrimidine kinase
BAMF_RS39005	COG1621	beta-fructofuranosidase activity
BAMF_RS39010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS39010	COG1263	PTS System
BAMF_RS39015	COG3711	transcriptional antiterminator
BAMF_RS39025	COG1404	Belongs to the peptidase S8 family
BAMF_RS39030	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMF_RS39035	COG2378	regulation of single-species biofilm formation
BAMF_RS39055	COG0778	Nitroreductase
BAMF_RS39060	COG0772	Belongs to the SEDS family
BAMF_RS39065	COG0454	-acetyltransferase
BAMF_RS39085	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAMF_RS39090	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAMF_RS39095	COG2261	transglycosylase associated protein
BAMF_RS39100	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BAMF_RS39105	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BAMF_RS39110	COG2246	polysaccharide biosynthetic process
BAMF_RS39115	COG1309	transcriptional regulator
BAMF_RS39135	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAMF_RS39140	COG2837	iron assimilation
BAMF_RS39145	COG2822	iron ion transport
BAMF_RS39150	COG0672	)-iron permease
BAMF_RS39165	COG0583	DNA-binding transcription factor activity
BAMF_RS39175	COG1346	cytolysis
BAMF_RS39180	COG4895	conserved protein (DUF2196)
BAMF_RS39185	COG0789	Transcriptional regulator
BAMF_RS39190	COG5504	Zn-dependent protease
BAMF_RS39195	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BAMF_RS39200	COG0346	lactoylglutathione lyase activity
BAMF_RS39205	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS39210	COG1404	Belongs to the peptidase S8 family
BAMF_RS39215	COG1442	glycosyl transferase family 8
BAMF_RS39220	COG2357	RelA SpoT domain protein
BAMF_RS39225	COG1575	Belongs to the MenA family. Type 1 subfamily
BAMF_RS39240	COG1696	Membrane protein involved in D-alanine export
BAMF_RS39250	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAMF_RS39255	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMF_RS39260	COG1486	melibiose metabolic process
BAMF_RS39265	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMF_RS39270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS39275	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS39280	COG3711	transcriptional antiterminator
BAMF_RS39280	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMF_RS39290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS39295	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMF_RS39305	COG0640	Transcriptional regulator
BAMF_RS39310	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMF_RS39315	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS39320	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMF_RS39325	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMF_RS39330	COG2723	6-phospho-beta-galactosidase activity
BAMF_RS39335	COG1940	carbohydrate kinase activity
BAMF_RS39340	COG1482	cell wall glycoprotein biosynthetic process
BAMF_RS39350	COG0753	catalase activity
BAMF_RS39355	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BAMF_RS39360	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BAMF_RS39370	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BAMF_RS39375	COG4988	ABC transporter
BAMF_RS39380	COG1294	oxidase, subunit
BAMF_RS39385	COG1271	oxidase subunit
BAMF_RS39390	COG3493	citrate carrier protein
BAMF_RS39395	COG0726	polysaccharide deacetylase
BAMF_RS39400	COG3842	ATPase activity
BAMF_RS39405	COG2508	Transcriptional regulator
BAMF_RS39410	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS39420	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAMF_RS39430	COG4894	glucomannan catabolic process
BAMF_RS39435	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BAMF_RS39440	COG0500	methyltransferase
BAMF_RS39445	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMF_RS39465	COG0693	protein deglycase activity
BAMF_RS39465	COG0753	catalase activity
BAMF_RS39475	COG2273	Hydrolase Family 16
BAMF_RS39480	COG3711	transcriptional antiterminator
BAMF_RS39485	COG2270	Major facilitator Superfamily
BAMF_RS39535	COG0697	spore germination
BAMF_RS39540	COG0589	response to stress
BAMF_RS39545	COG2723	6-phospho-beta-galactosidase activity
BAMF_RS39550	COG1263	PTS System
BAMF_RS39550	COG2190	(PTS) system
BAMF_RS39550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMF_RS39565	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BAMF_RS39585	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMF_RS39610	COG0010	Belongs to the arginase family
BAMF_RS39615	COG0833	amino acid
BAMF_RS39620	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BAMF_RS39625	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMF_RS39635	COG2390	Transcriptional regulator
BAMF_RS39640	COG0561	phosphatase activity
BAMF_RS39670	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMF_RS39675	COG5294	Protein conserved in bacteria
BAMF_RS39680	COG0577	efflux transmembrane transporter activity
BAMF_RS39685	COG1136	(ABC) transporter
BAMF_RS39690	COG2205	protein histidine kinase activity
BAMF_RS39695	COG0745	RESPONSE REGULATOR receiver
BAMF_RS39710	COG1082	Xylose isomerase domain protein TIM barrel
BAMF_RS39720	COG2814	Major facilitator Superfamily
BAMF_RS39750	COG1349	DNA-binding transcription factor activity
BAMF_RS39755	COG0667	Aldo Keto reductase
BAMF_RS39760	COG2814	Major facilitator Superfamily
BAMF_RS39770	COG1028	Short-chain dehydrogenase reductase Sdr
BAMF_RS39775	COG2197	response regulator
BAMF_RS39780	COG4585	Histidine kinase
BAMF_RS39785	COG3239	Fatty acid desaturase
BAMF_RS39790	COG1309	transcriptional regulator
BAMF_RS39795	COG1012	belongs to the aldehyde dehydrogenase family
BAMF_RS39800	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BAMF_RS39810	COG0640	Transcriptional regulator
BAMF_RS39815	COG2814	Major facilitator Superfamily
BAMF_RS39820	COG1714	RDD family
BAMF_RS39830	COG0450	alkyl hydroperoxide reductase
BAMF_RS39835	COG3634	alkyl hydroperoxide reductase activity
BAMF_RS39845	COG1113	amino acid transport
BAMF_RS39900	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMF_RS39915	COG2323	membrane
BAMF_RS39925	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMF_RS39940	COG2080	2 iron, 2 sulfur cluster binding
BAMF_RS39950	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAMF_RS39955	COG2068	MobA-Related Protein
BAMF_RS39960	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BAMF_RS40005	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
BAMF_RS40010	COG0667	Aldo Keto reductase
BAMF_RS40015	COG0456	acetyltransferase
BAMF_RS40020	COG0457	Tetratricopeptide repeat
BAMF_RS40025	COG0010	Belongs to the arginase family
BAMF_RS40030	COG0833	amino acid
BAMF_RS40035	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMF_RS40040	COG5658	integral membrane protein
BAMF_RS40045	COG0640	Transcriptional regulator
BAMF_RS40050	COG3829	transcription factor binding
BAMF_RS40065	COG5002	protein histidine kinase activity
BAMF_RS40065	COG3850	Histidine kinase
BAMF_RS40070	COG0745	RESPONSE REGULATOR receiver
BAMF_RS40080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMF_RS40085	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BAMF_RS40090	COG4853	Protein conserved in bacteria
BAMF_RS40095	COG4863	YycH protein
BAMF_RS40100	COG5002	protein histidine kinase activity
BAMF_RS40105	COG0745	RESPONSE REGULATOR receiver
BAMF_RS40140	COG0346	lactoylglutathione lyase activity
BAMF_RS40145	COG0305	Participates in initiation and elongation during chromosome replication
BAMF_RS40170	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BAMF_RS40175	COG0438	transferase activity, transferring glycosyl groups
BAMF_RS40195	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BAMF_RS40200	COG4241	membrane
BAMF_RS40210	COG5577	PFAM Coat F domain
BAMF_RS40215	COG1733	regulation of RNA biosynthetic process
BAMF_RS40225	COG0697	spore germination
BAMF_RS40230	COG1621	beta-fructofuranosidase activity
BAMF_RS40235	COG1621	beta-fructofuranosidase activity
BAMF_RS40245	COG2318	DinB family
BAMF_RS40250	COG2211	Major facilitator Superfamily
BAMF_RS40265	COG0778	Nitroreductase
BAMF_RS40270	COG1846	Transcriptional regulator
BAMF_RS40275	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMF_RS40280	COG1846	Transcriptional regulator
BAMF_RS40285	COG2153	protein acetylation
BAMF_RS40290	COG2267	carboxylic ester hydrolase activity
BAMF_RS40310	COG1266	CAAX protease self-immunity
BAMF_RS40315	COG0477	Major facilitator Superfamily
BAMF_RS40315	COG2814	Major facilitator Superfamily
BAMF_RS40320	COG0346	lactoylglutathione lyase activity
BAMF_RS40330	COG0708	Exodeoxyribonuclease III
BAMF_RS40335	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMF_RS40340	COG2169	Transcriptional regulator
BAMF_RS40350	COG0629	single-stranded DNA binding
BAMF_RS40360	COG0012	GTP binding
BAMF_RS40365	COG0243	molybdopterin cofactor binding
BAMF_RS40370	COG4481	Protein conserved in bacteria
BAMF_RS40375	COG3949	Membrane
BAMF_RS40390	COG1475	DNA binding
BAMF_RS40395	COG1192	Involved in chromosome partitioning
BAMF_RS40420	COG1847	R3H domain protein
BAMF_RS40425	COG0706	membrane insertase activity