KSO_RS00015 SM00393 Putative single-stranded nucleic acids-binding domain KSO_RS00015 SM01245 KSO_RS00015 KSO_RS00025 SM01228 KSO_RS00025 KSO_RS00035 SM00470 ParB-like nuclease domain KSO_RS00045 SM00470 ParB-like nuclease domain KSO_RS00070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_RS00095 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS00110 SM00354 helix_turn _helix lactose operon repressor KSO_RS00160 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS00195 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS00205 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS00230 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS00230 SM00895 KSO_RS00230 KSO_RS00235 SM00640 Glycosyl hydrolases family 32 KSO_RS00250 SM01131 KSO_RS00250 KSO_RS00275 SM00267 diguanylate cyclase KSO_RS00330 SM00382 ATPases associated with a variety of cellular activities KSO_RS00340 SM00788 Adenylosuccinate synthetase KSO_RS00370 SM00448 cheY-homologous receiver domain KSO_RS00370 SM00862 Transcriptional regulatory protein, C terminal KSO_RS00375 SM00091 PAS domain KSO_RS00375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS00375 SM00387 Histidine kinase-like ATPases KSO_RS00375 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS00390 SM00849 Metallo-beta-lactamase superfamily KSO_RS00395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS00405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS00405 SM00387 Histidine kinase-like ATPases KSO_RS00405 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS00425 SM00382 ATPases associated with a variety of cellular activities KSO_RS00430 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KSO_RS00435 SM00382 ATPases associated with a variety of cellular activities KSO_RS00440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS00465 SM00028 Tetratricopeptide repeats KSO_RS00505 SM00487 DEAD-like helicases superfamily KSO_RS00505 SM00491 KSO_RS00505 KSO_RS00560 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KSO_RS00565 SM01092 CO dehydrogenase flavoprotein C-terminal domain KSO_RS00610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS00620 SM00564 beta-propeller repeat KSO_RS00645 SM00421 helix_turn_helix, Lux Regulon KSO_RS00645 SM00448 cheY-homologous receiver domain KSO_RS00660 SM00387 Histidine kinase-like ATPases KSO_RS00675 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS00675 SM01134 KSO_RS00675 KSO_RS00730 SM00448 cheY-homologous receiver domain KSO_RS00730 SM00862 Transcriptional regulatory protein, C terminal KSO_RS00735 SM00387 Histidine kinase-like ATPases KSO_RS00740 SM00382 ATPases associated with a variety of cellular activities KSO_RS00795 SM01133 KSO_RS00795 KSO_RS00805 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KSO_RS00850 SM00487 DEAD-like helicases superfamily KSO_RS00850 SM00490 helicase superfamily c-terminal domain KSO_RS00865 SM00656 KSO_RS00865 KSO_RS00935 SM00487 DEAD-like helicases superfamily KSO_RS00935 SM00490 helicase superfamily c-terminal domain KSO_RS00960 SM01060 KSO_RS00960 KSO_RS01020 SM00382 ATPases associated with a variety of cellular activities KSO_RS01045 SM00382 ATPases associated with a variety of cellular activities KSO_RS01050 SM00382 ATPases associated with a variety of cellular activities KSO_RS01070 SM01060 KSO_RS01070 KSO_RS01115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS01200 SM00954 Region found in RelA / SpoT proteins KSO_RS01225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_RS01230 SM00422 helix_turn_helix, mercury resistance KSO_RS01365 SM01061 CAT RNA binding domain KSO_RS01375 SM00640 Glycosyl hydrolases family 32 KSO_RS01410 SM00986 Uracil DNA glycosylase superfamily KSO_RS01410 SM00987 UreE urease accessory protein, C-terminal domain KSO_RS01455 SM00858 KSO_RS01455 KSO_RS01495 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_RS01605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS01625 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS01665 SM00421 helix_turn_helix, Lux Regulon KSO_RS01690 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS01700 SM00028 Tetratricopeptide repeats KSO_RS01710 SM00836 DALR anticodon binding domain KSO_RS01710 SM01016 Arginyl tRNA synthetase N terminal dom KSO_RS01720 SM00100 Cyclic nucleotide-monophosphate binding domain KSO_RS01720 SM00419 helix_turn_helix, cAMP Regulatory protein KSO_RS01735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_RS01760 SM00155 Phospholipase D. Active site motifs. KSO_RS01765 SM00382 ATPases associated with a variety of cellular activities KSO_RS01780 SM00155 Phospholipase D. Active site motifs. KSO_RS01805 SM00448 cheY-homologous receiver domain KSO_RS01830 SM00357 Cold shock protein domain KSO_RS01830 SM00382 ATPases associated with a variety of cellular activities KSO_RS01830 SM00959 Rho termination factor, N-terminal domain KSO_RS01845 SM00919 Malic enzyme, NAD binding domain KSO_RS01845 SM01274 KSO_RS01845 KSO_RS01865 SM00937 KSO_RS01865 KSO_RS01905 SM00226 Low molecular weight phosphatase family KSO_RS01965 SM00382 ATPases associated with a variety of cellular activities KSO_RS02000 SM00327 von Willebrand factor (vWF) type A domain KSO_RS02005 SM00327 von Willebrand factor (vWF) type A domain KSO_RS02015 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS02020 SM00028 Tetratricopeptide repeats KSO_RS02070 SM00155 Phospholipase D. Active site motifs. KSO_RS02100 SM00014 Acid phosphatase homologues KSO_RS02110 SM00938 Nitrogen regulatory protein P-II KSO_RS02140 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS02165 SM00028 Tetratricopeptide repeats KSO_RS02195 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS02195 SM01134 KSO_RS02195 KSO_RS02205 SM00487 DEAD-like helicases superfamily KSO_RS02205 SM00490 helicase superfamily c-terminal domain KSO_RS02230 SM00984 UDP binding domain KSO_RS02280 SM00860 SMI1 / KNR4 family KSO_RS02325 SM00344 helix_turn_helix ASNC type KSO_RS02340 SM00903 Flavin reductase like domain KSO_RS02390 SM00287 Bacterial SH3 domain homologues KSO_RS02405 SM00382 ATPases associated with a variety of cellular activities KSO_RS02420 SM00354 helix_turn _helix lactose operon repressor KSO_RS02450 SM00854 Bacterial capsule synthesis protein PGA_cap KSO_RS02505 SM00047 Lysozyme subfamily 2 KSO_RS02505 SM00287 Bacterial SH3 domain homologues KSO_RS02540 SM00382 ATPases associated with a variety of cellular activities KSO_RS02570 SM00646 KSO_RS02570 KSO_RS02590 SM00984 UDP binding domain KSO_RS02630 SM00387 Histidine kinase-like ATPases KSO_RS02635 SM00421 helix_turn_helix, Lux Regulon KSO_RS02635 SM00448 cheY-homologous receiver domain KSO_RS02645 SM00487 DEAD-like helicases superfamily KSO_RS02645 SM00490 helicase superfamily c-terminal domain KSO_RS02730 SM00957 SecA DEAD-like domain KSO_RS02730 SM00958 SecA preprotein cross-linking domain KSO_RS02735 SM00937 KSO_RS02735 KSO_RS02750 SM00382 ATPases associated with a variety of cellular activities KSO_RS02760 SM00710 Parallel beta-helix repeats KSO_RS02765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS02765 SM00245 tail specific protease KSO_RS02775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS02820 SM00487 DEAD-like helicases superfamily KSO_RS02820 SM00490 helicase superfamily c-terminal domain KSO_RS02825 SM00382 ATPases associated with a variety of cellular activities KSO_RS02865 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS02865 SM00866 KSO_RS02865 KSO_RS02945 SM00382 ATPases associated with a variety of cellular activities KSO_RS02955 SM00448 cheY-homologous receiver domain KSO_RS02955 SM00862 Transcriptional regulatory protein, C terminal KSO_RS02960 SM00387 Histidine kinase-like ATPases KSO_RS02960 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS02965 SM00028 Tetratricopeptide repeats KSO_RS03020 SM00947 Carbonic anhydrase KSO_RS03060 SM00354 helix_turn _helix lactose operon repressor KSO_RS03070 SM00640 Glycosyl hydrolases family 32 KSO_RS03150 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS03245 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS03245 SM00895 KSO_RS03245 KSO_RS03295 SM00354 helix_turn _helix lactose operon repressor KSO_RS03330 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS03345 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_RS03370 SM01192 KSO_RS03370 KSO_RS03370 SM01193 KSO_RS03370 KSO_RS03380 SM00984 UDP binding domain KSO_RS03455 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS03455 SM00382 ATPases associated with a variety of cellular activities KSO_RS03480 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS03480 SM00382 ATPases associated with a variety of cellular activities KSO_RS03500 SM00382 ATPases associated with a variety of cellular activities KSO_RS03515 SM00448 cheY-homologous receiver domain KSO_RS03515 SM00862 Transcriptional regulatory protein, C terminal KSO_RS03520 SM00387 Histidine kinase-like ATPases KSO_RS03520 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS03530 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS03535 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS03540 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS03555 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS03555 SM00357 Cold shock protein domain KSO_RS03555 SM00955 KSO_RS03555 KSO_RS03595 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS03600 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS03615 SM00382 ATPases associated with a variety of cellular activities KSO_RS03650 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS03750 SM00382 ATPases associated with a variety of cellular activities KSO_RS03760 SM00421 helix_turn_helix, Lux Regulon KSO_RS03760 SM00448 cheY-homologous receiver domain KSO_RS03820 SM00382 ATPases associated with a variety of cellular activities KSO_RS03830 SM00835 Cupin KSO_RS03845 SM00448 cheY-homologous receiver domain KSO_RS03845 SM00862 Transcriptional regulatory protein, C terminal KSO_RS03850 SM00387 Histidine kinase-like ATPases KSO_RS03850 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS03875 SM00382 ATPases associated with a variety of cellular activities KSO_RS03910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS03910 SM00387 Histidine kinase-like ATPases KSO_RS03915 SM00421 helix_turn_helix, Lux Regulon KSO_RS03915 SM00448 cheY-homologous receiver domain KSO_RS03950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS03950 SM00387 Histidine kinase-like ATPases KSO_RS03950 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS03955 SM00448 cheY-homologous receiver domain KSO_RS03955 SM00862 Transcriptional regulatory protein, C terminal KSO_RS03960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS03985 SM00382 ATPases associated with a variety of cellular activities KSO_RS04015 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS04070 SM00493 KSO_RS04070 KSO_RS04085 SM00382 ATPases associated with a variety of cellular activities KSO_RS04085 SM00930 KSO_RS04085 KSO_RS04105 SM00382 ATPases associated with a variety of cellular activities KSO_RS04140 SM00465 GIY-YIG type nucleases (URI domain) KSO_RS04150 SM00422 helix_turn_helix, mercury resistance KSO_RS04180 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS04180 SM00866 KSO_RS04180 KSO_RS04185 SM00382 ATPases associated with a variety of cellular activities KSO_RS04255 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS04345 SM00422 helix_turn_helix, mercury resistance KSO_RS04365 SM00382 ATPases associated with a variety of cellular activities KSO_RS04380 SM01240 KSO_RS04380 KSO_RS04440 SM00822 KSO_RS04440 KSO_RS04460 SM00823 Phosphopantetheine attachment site KSO_RS04460 SM00824 Thioesterase KSO_RS04465 SM00923 MbtH-like protein KSO_RS04475 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KSO_RS04475 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KSO_RS04520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS04585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS04585 SM00387 Histidine kinase-like ATPases KSO_RS04590 SM00421 helix_turn_helix, Lux Regulon KSO_RS04590 SM00448 cheY-homologous receiver domain KSO_RS04650 SM00382 ATPases associated with a variety of cellular activities KSO_RS04660 SM00448 cheY-homologous receiver domain KSO_RS04665 SM00091 PAS domain KSO_RS04665 SM00387 Histidine kinase-like ATPases KSO_RS04690 SM00479 KSO_RS04690 KSO_RS04695 SM01298 KSO_RS04695 KSO_RS04700 SM00387 Histidine kinase-like ATPases KSO_RS04700 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS04720 SM00344 helix_turn_helix ASNC type KSO_RS04730 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS04795 SM01091 Transporter associated domain KSO_RS04800 SM00642 Alpha-amylase domain KSO_RS04825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS04825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS04825 SM00319 Homologues of the ligand binding domain of Tar KSO_RS04830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS04830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS04830 SM00319 Homologues of the ligand binding domain of Tar KSO_RS04835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS04835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS04835 SM00319 Homologues of the ligand binding domain of Tar KSO_RS04840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS04840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS04840 SM00319 Homologues of the ligand binding domain of Tar KSO_RS04880 SM00028 Tetratricopeptide repeats KSO_RS04895 SM00835 Cupin KSO_RS04905 SM00047 Lysozyme subfamily 2 KSO_RS04950 SM00244 prohibitin homologues KSO_RS05115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KSO_RS05140 SM00947 Carbonic anhydrase KSO_RS05145 SM01234 KSO_RS05145 KSO_RS05185 SM00382 ATPases associated with a variety of cellular activities KSO_RS05255 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS05265 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS05270 SM00382 ATPases associated with a variety of cellular activities KSO_RS05290 SM00382 ATPases associated with a variety of cellular activities KSO_RS05300 SM00448 cheY-homologous receiver domain KSO_RS05300 SM00862 Transcriptional regulatory protein, C terminal KSO_RS05305 SM00387 Histidine kinase-like ATPases KSO_RS05310 SM00382 ATPases associated with a variety of cellular activities KSO_RS05330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_RS05330 SM00091 PAS domain KSO_RS05345 SM00450 Rhodanese Homology Domain KSO_RS05375 SM00354 helix_turn _helix lactose operon repressor KSO_RS05400 SM00363 S4 RNA-binding domain KSO_RS05405 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS05410 SM00382 ATPases associated with a variety of cellular activities KSO_RS05445 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_RS05465 SM00849 Metallo-beta-lactamase superfamily KSO_RS05470 SM00919 Malic enzyme, NAD binding domain KSO_RS05470 SM01274 KSO_RS05470 KSO_RS05505 SM00382 ATPases associated with a variety of cellular activities KSO_RS05505 SM00843 KSO_RS05505 KSO_RS05530 SM00830 Chorismate mutase type II KSO_RS05535 SM00354 helix_turn _helix lactose operon repressor KSO_RS05555 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS05570 SM00363 S4 RNA-binding domain KSO_RS05620 SM00860 SMI1 / KNR4 family KSO_RS05630 SM00363 S4 RNA-binding domain KSO_RS05630 SM01390 KSO_RS05630 KSO_RS05635 SM00267 diguanylate cyclase KSO_RS05670 SM00981 KSO_RS05670 KSO_RS05730 SM00852 Probable molybdopterin binding domain KSO_RS05750 SM00849 Metallo-beta-lactamase superfamily KSO_RS05755 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS05785 SM00481 DNA polymerase alpha chain like domain KSO_RS05790 SM00919 Malic enzyme, NAD binding domain KSO_RS05790 SM01274 KSO_RS05790 KSO_RS05845 SM01329 KSO_RS05845 KSO_RS05855 SM00448 cheY-homologous receiver domain KSO_RS05855 SM00862 Transcriptional regulatory protein, C terminal KSO_RS05860 SM00091 PAS domain KSO_RS05860 SM00387 Histidine kinase-like ATPases KSO_RS05860 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS05865 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KSO_RS05865 SM00474 3'-5' exonuclease KSO_RS05865 SM00475 5'-3' exonuclease KSO_RS05865 SM00482 DNA polymerase A domain KSO_RS05870 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KSO_RS05870 SM01232 KSO_RS05870 KSO_RS05900 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_RS05920 SM00382 ATPases associated with a variety of cellular activities KSO_RS05935 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KSO_RS05945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KSO_RS05945 SM00387 Histidine kinase-like ATPases KSO_RS05950 SM00448 cheY-homologous receiver domain KSO_RS05950 SM00850 LytTr DNA-binding domain KSO_RS06010 SM01007 Class II Aldolase and Adducin N-terminal domain KSO_RS06040 SM00813 Alpha-L-arabinofuranosidase C-terminus KSO_RS06070 SM00967 RNA 2'-O ribose methyltransferase substrate binding KSO_RS06080 SM00873 B3/4 domain KSO_RS06080 SM00874 tRNA synthetase B5 domain KSO_RS06080 SM00896 Ferredoxin-fold anticodon binding domain KSO_RS06100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_RS06100 SM00481 DNA polymerase alpha chain like domain KSO_RS06100 SM00483 DNA polymerase X family KSO_RS06105 SM00463 Small MutS-related domain KSO_RS06105 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KSO_RS06105 SM00534 ATPase domain of DNA mismatch repair MUTS family KSO_RS06135 SM00893 Electron transfer flavoprotein domain KSO_RS06140 SM00893 Electron transfer flavoprotein domain KSO_RS06145 SM00813 Alpha-L-arabinofuranosidase C-terminus KSO_RS06155 SM00465 GIY-YIG type nucleases (URI domain) KSO_RS06190 SM00421 helix_turn_helix, Lux Regulon KSO_RS06195 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS06205 SM00909 Sporulation and spore germination KSO_RS06260 SM00917 LeuA allosteric (dimerisation) domain KSO_RS06265 SM01329 KSO_RS06265 KSO_RS06290 SM00382 ATPases associated with a variety of cellular activities KSO_RS06290 SM00994 ClpX C4-type zinc finger KSO_RS06290 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_RS06295 SM00382 ATPases associated with a variety of cellular activities KSO_RS06300 SM00382 ATPases associated with a variety of cellular activities KSO_RS06300 SM00464 Found in ATP-dependent protease La (LON) KSO_RS06335 SM01004 Delta-aminolevulinic acid dehydratase KSO_RS06345 SM00257 Lysin motif KSO_RS06440 SM01317 KSO_RS06440 KSO_RS06485 SM00257 Lysin motif KSO_RS06505 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_RS06510 SM00382 ATPases associated with a variety of cellular activities KSO_RS06530 SM01323 KSO_RS06530 KSO_RS06580 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS06580 SM00954 Region found in RelA / SpoT proteins KSO_RS06590 SM00287 Bacterial SH3 domain homologues KSO_RS06590 SM00646 KSO_RS06590 KSO_RS06610 SM00382 ATPases associated with a variety of cellular activities KSO_RS06630 SM00028 Tetratricopeptide repeats KSO_RS06635 SM00382 ATPases associated with a variety of cellular activities KSO_RS06660 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS06660 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KSO_RS06665 SM00382 ATPases associated with a variety of cellular activities KSO_RS06675 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KSO_RS06685 SM00732 Likely ribonuclease with RNase H fold. KSO_RS06740 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS06930 SM00047 Lysozyme subfamily 2 KSO_RS06935 SM00710 Parallel beta-helix repeats KSO_RS06960 SM00644 KSO_RS06960 KSO_RS07030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_RS07030 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_RS07080 SM00849 Metallo-beta-lactamase superfamily KSO_RS07140 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS07140 SM00871 Bacterial transcription activator, effector binding domain KSO_RS07200 SM01103 KSO_RS07200 KSO_RS07210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS07230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_RS07240 SM00849 Metallo-beta-lactamase superfamily KSO_RS07270 SM00838 Elongation factor G C-terminus KSO_RS07275 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS07295 SM00271 DnaJ molecular chaperone homology domain KSO_RS07310 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS07360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS07400 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS07415 SM00400 zinc finger KSO_RS07415 SM00493 KSO_RS07415 KSO_RS07450 SM00487 DEAD-like helicases superfamily KSO_RS07450 SM00490 helicase superfamily c-terminal domain KSO_RS07455 SM00518 AP endonuclease family 2 KSO_RS07490 SM00257 Lysin motif KSO_RS07535 SM00382 ATPases associated with a variety of cellular activities KSO_RS07540 SM00382 ATPases associated with a variety of cellular activities KSO_RS07575 SM00631 KSO_RS07575 KSO_RS07595 SM00849 Metallo-beta-lactamase superfamily KSO_RS07620 SM01091 Transporter associated domain KSO_RS07630 SM00382 ATPases associated with a variety of cellular activities KSO_RS07690 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS07705 SM00487 DEAD-like helicases superfamily KSO_RS07705 SM00490 helicase superfamily c-terminal domain KSO_RS07725 SM00450 Rhodanese Homology Domain KSO_RS07735 SM00529 Helix-turn-helix diphteria tox regulatory element KSO_RS07765 SM00841 Elongation factor P, C-terminal KSO_RS07765 SM01185 KSO_RS07765 KSO_RS07775 SM00382 ATPases associated with a variety of cellular activities KSO_RS07820 SM00878 Biotin carboxylase C-terminal domain KSO_RS07855 SM00861 Transketolase, pyrimidine binding domain KSO_RS07860 SM00363 S4 RNA-binding domain KSO_RS07875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS07880 SM00448 cheY-homologous receiver domain KSO_RS07885 SM01005 Alanine racemase, C-terminal domain KSO_RS07910 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS07925 SM00646 KSO_RS07925 KSO_RS07970 SM00091 PAS domain KSO_RS07970 SM00382 ATPases associated with a variety of cellular activities KSO_RS07980 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_RS08000 SM00861 Transketolase, pyrimidine binding domain KSO_RS08010 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_RS08020 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS08020 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KSO_RS08030 SM00382 ATPases associated with a variety of cellular activities KSO_RS08075 SM01350 KSO_RS08075 KSO_RS08115 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KSO_RS08120 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS08145 SM00822 KSO_RS08145 KSO_RS08145 SM00823 Phosphopantetheine attachment site KSO_RS08145 SM00825 Beta-ketoacyl synthase KSO_RS08145 SM00826 KSO_RS08145 KSO_RS08145 SM01294 KSO_RS08145 KSO_RS08150 SM00822 KSO_RS08150 KSO_RS08150 SM00823 Phosphopantetheine attachment site KSO_RS08150 SM00825 Beta-ketoacyl synthase KSO_RS08150 SM01294 KSO_RS08150 KSO_RS08155 SM00822 KSO_RS08155 KSO_RS08155 SM00823 Phosphopantetheine attachment site KSO_RS08155 SM00825 Beta-ketoacyl synthase KSO_RS08155 SM00826 KSO_RS08155 KSO_RS08155 SM01294 KSO_RS08155 KSO_RS08160 SM00822 KSO_RS08160 KSO_RS08160 SM00823 Phosphopantetheine attachment site KSO_RS08160 SM00825 Beta-ketoacyl synthase KSO_RS08160 SM00826 KSO_RS08160 KSO_RS08160 SM01294 KSO_RS08160 KSO_RS08165 SM00822 KSO_RS08165 KSO_RS08165 SM00823 Phosphopantetheine attachment site KSO_RS08165 SM00825 Beta-ketoacyl synthase KSO_RS08165 SM01294 KSO_RS08165 KSO_RS08170 SM00822 KSO_RS08170 KSO_RS08170 SM00825 Beta-ketoacyl synthase KSO_RS08170 SM00826 KSO_RS08170 KSO_RS08175 SM00823 Phosphopantetheine attachment site KSO_RS08175 SM00825 Beta-ketoacyl synthase KSO_RS08175 SM00829 Enoylreductase KSO_RS08175 SM01294 KSO_RS08175 KSO_RS08200 SM00849 Metallo-beta-lactamase superfamily KSO_RS08300 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS08305 SM00870 KSO_RS08305 KSO_RS08320 SM00919 Malic enzyme, NAD binding domain KSO_RS08320 SM01274 KSO_RS08320 KSO_RS08365 SM00936 Penicillin-binding protein 5, C-terminal domain KSO_RS08375 SM00387 Histidine kinase-like ATPases KSO_RS08510 SM00363 S4 RNA-binding domain KSO_RS08530 SM00448 cheY-homologous receiver domain KSO_RS08530 SM00862 Transcriptional regulatory protein, C terminal KSO_RS08535 SM00091 PAS domain KSO_RS08535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS08535 SM00387 Histidine kinase-like ATPases KSO_RS08535 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS08570 SM00487 DEAD-like helicases superfamily KSO_RS08570 SM00490 helicase superfamily c-terminal domain KSO_RS08580 SM00257 Lysin motif KSO_RS08600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_RS08635 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS08675 SM00411 bacterial (prokaryotic) histone like domain KSO_RS08705 SM00562 KSO_RS08705 KSO_RS08710 SM00138 Methyltransferase, chemotaxis proteins KSO_RS08775 SM00028 Tetratricopeptide repeats KSO_RS08780 SM00914 KSO_RS08780 KSO_RS08815 SM00835 Cupin KSO_RS08835 SM00851 MGS-like domain KSO_RS08875 SM00479 KSO_RS08875 KSO_RS08875 SM00487 DEAD-like helicases superfamily KSO_RS08875 SM00491 KSO_RS08875 KSO_RS08900 SM00478 endonuclease III KSO_RS08900 SM00525 KSO_RS08900 KSO_RS08910 SM00060 Fibronectin type 3 domain KSO_RS08960 SM00487 DEAD-like helicases superfamily KSO_RS08960 SM00490 helicase superfamily c-terminal domain KSO_RS08980 SM00981 KSO_RS08980 KSO_RS08995 SM00491 KSO_RS08995 KSO_RS09065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KSO_RS09065 SM00475 5'-3' exonuclease KSO_RS09105 SM00357 Cold shock protein domain KSO_RS09125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS09130 SM00567 E-Z type HEAT repeats KSO_RS09130 SM00932 Scaffold protein Nfu/NifU N terminal KSO_RS09205 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS09270 SM00882 Coenzyme A transferase KSO_RS09275 SM00882 Coenzyme A transferase KSO_RS09320 SM00014 Acid phosphatase homologues KSO_RS09350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS09350 SM00245 tail specific protease KSO_RS09355 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS09355 SM00866 KSO_RS09355 KSO_RS09460 SM00257 Lysin motif KSO_RS09470 SM00382 ATPases associated with a variety of cellular activities KSO_RS09475 SM00327 von Willebrand factor (vWF) type A domain KSO_RS09480 SM00861 Transketolase, pyrimidine binding domain KSO_RS09490 SM00849 Metallo-beta-lactamase superfamily KSO_RS09565 SM00341 Helicase and RNase D C-terminal KSO_RS09565 SM00487 DEAD-like helicases superfamily KSO_RS09565 SM00490 helicase superfamily c-terminal domain KSO_RS09565 SM00956 KSO_RS09565 KSO_RS09570 SM00257 Lysin motif KSO_RS09605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS09615 SM00849 Metallo-beta-lactamase superfamily KSO_RS09625 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS09640 SM00822 KSO_RS09640 KSO_RS09650 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS09660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_RS09690 SM00822 KSO_RS09690 KSO_RS09705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_RS09730 SM00829 Enoylreductase KSO_RS09745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS09795 SM00823 Phosphopantetheine attachment site KSO_RS09800 SM00823 Phosphopantetheine attachment site KSO_RS09805 SM00823 Phosphopantetheine attachment site KSO_RS09810 SM00823 Phosphopantetheine attachment site KSO_RS09815 SM00824 Thioesterase KSO_RS09840 SM00878 Biotin carboxylase C-terminal domain KSO_RS09900 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS09900 SM00876 Biotin and Thiamin Synthesis associated domain KSO_RS09915 SM00882 Coenzyme A transferase KSO_RS09920 SM00882 Coenzyme A transferase KSO_RS09925 SM00822 KSO_RS09925 KSO_RS09930 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS09935 SM00823 Phosphopantetheine attachment site KSO_RS09935 SM00825 Beta-ketoacyl synthase KSO_RS09940 SM00823 Phosphopantetheine attachment site KSO_RS09945 SM00823 Phosphopantetheine attachment site KSO_RS09945 SM00824 Thioesterase KSO_RS09950 SM00606 Cellulose Binding Domain Type IV KSO_RS09960 SM00448 cheY-homologous receiver domain KSO_RS09960 SM00862 Transcriptional regulatory protein, C terminal KSO_RS09965 SM00387 Histidine kinase-like ATPases KSO_RS09965 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS09975 SM01067 Cellulose binding domain KSO_RS10005 SM00354 helix_turn _helix lactose operon repressor KSO_RS10025 SM00829 Enoylreductase KSO_RS10045 SM00434 DNA Topoisomerase IV KSO_RS10050 SM00387 Histidine kinase-like ATPases KSO_RS10050 SM00433 TopoisomeraseII KSO_RS10055 SM00881 CoA binding domain KSO_RS10060 SM01207 KSO_RS10060 KSO_RS10130 SM00448 cheY-homologous receiver domain KSO_RS10155 SM00861 Transketolase, pyrimidine binding domain KSO_RS10165 SM00857 Resolvase, N terminal domain KSO_RS10170 SM00257 Lysin motif KSO_RS10205 SM00710 Parallel beta-helix repeats KSO_RS10265 SM00829 Enoylreductase KSO_RS10325 SM01230 KSO_RS10325 KSO_RS10330 SM00422 helix_turn_helix, mercury resistance KSO_RS10345 SM00382 ATPases associated with a variety of cellular activities KSO_RS10355 SM00646 KSO_RS10355 KSO_RS10460 SM00823 Phosphopantetheine attachment site KSO_RS10460 SM00825 Beta-ketoacyl synthase KSO_RS10460 SM01294 KSO_RS10460 KSO_RS10465 SM00822 KSO_RS10465 KSO_RS10465 SM00823 Phosphopantetheine attachment site KSO_RS10465 SM00825 Beta-ketoacyl synthase KSO_RS10465 SM00826 KSO_RS10465 KSO_RS10465 SM01294 KSO_RS10465 KSO_RS10470 SM00822 KSO_RS10470 KSO_RS10470 SM00823 Phosphopantetheine attachment site KSO_RS10470 SM00825 Beta-ketoacyl synthase KSO_RS10470 SM00826 KSO_RS10470 KSO_RS10470 SM01294 KSO_RS10470 KSO_RS10475 SM00822 KSO_RS10475 KSO_RS10475 SM00823 Phosphopantetheine attachment site KSO_RS10475 SM00825 Beta-ketoacyl synthase KSO_RS10475 SM00826 KSO_RS10475 KSO_RS10475 SM01294 KSO_RS10475 KSO_RS10480 SM00822 KSO_RS10480 KSO_RS10480 SM00823 Phosphopantetheine attachment site KSO_RS10480 SM00825 Beta-ketoacyl synthase KSO_RS10480 SM00826 KSO_RS10480 KSO_RS10480 SM01294 KSO_RS10480 KSO_RS10505 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS10510 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS10515 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS10520 SM00849 Metallo-beta-lactamase superfamily KSO_RS10530 SM00853 MutL C terminal dimerisation domain KSO_RS10530 SM01340 KSO_RS10530 KSO_RS10535 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KSO_RS10535 SM00534 ATPase domain of DNA mismatch repair MUTS family KSO_RS10550 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS10560 SM00829 Enoylreductase KSO_RS10575 SM00322 K homology RNA-binding domain KSO_RS10575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS10585 SM00382 ATPases associated with a variety of cellular activities KSO_RS10590 SM00852 Probable molybdopterin binding domain KSO_RS10600 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS10635 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS10645 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS10645 SM00866 KSO_RS10645 KSO_RS10650 SM00382 ATPases associated with a variety of cellular activities KSO_RS10650 SM00843 KSO_RS10650 KSO_RS10665 SM00849 Metallo-beta-lactamase superfamily KSO_RS10670 SM01130 KSO_RS10670 KSO_RS10680 SM00859 Semialdehyde dehydrogenase, NAD binding domain KSO_RS10710 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS10710 SM00322 K homology RNA-binding domain KSO_RS10715 SM01387 KSO_RS10715 KSO_RS10720 SM00904 Riboflavin kinase KSO_RS10755 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS10755 SM00322 K homology RNA-binding domain KSO_RS10765 SM00479 KSO_RS10765 KSO_RS10765 SM00481 DNA polymerase alpha chain like domain KSO_RS10775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS10835 SM00260 Two component signalling adaptor domain KSO_RS10840 SM00073 Histidine Phosphotransfer domain KSO_RS10840 SM00260 Two component signalling adaptor domain KSO_RS10840 SM00387 Histidine kinase-like ATPases KSO_RS10840 SM01231 KSO_RS10840 KSO_RS10845 SM00448 cheY-homologous receiver domain KSO_RS10855 SM00962 SRP54-type protein, GTPase domain KSO_RS10890 SM00448 cheY-homologous receiver domain KSO_RS10940 SM00382 ATPases associated with a variety of cellular activities KSO_RS10980 SM00382 ATPases associated with a variety of cellular activities KSO_RS10980 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_RS11000 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KSO_RS11000 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KSO_RS11000 SM00493 KSO_RS11000 KSO_RS11010 SM00881 CoA binding domain KSO_RS11070 SM00382 ATPases associated with a variety of cellular activities KSO_RS11070 SM00962 SRP54-type protein, GTPase domain KSO_RS11070 SM00963 SRP54-type protein, helical bundle domain KSO_RS11085 SM00382 ATPases associated with a variety of cellular activities KSO_RS11085 SM00962 SRP54-type protein, GTPase domain KSO_RS11085 SM00963 SRP54-type protein, helical bundle domain KSO_RS11090 SM00968 SMC proteins Flexible Hinge Domain KSO_RS11095 SM00358 Double-stranded RNA binding motif KSO_RS11095 SM00535 Ribonuclease III family KSO_RS11105 SM00822 KSO_RS11105 KSO_RS11110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS11125 SM00487 DEAD-like helicases superfamily KSO_RS11125 SM00490 helicase superfamily c-terminal domain KSO_RS11140 SM01120 KSO_RS11140 KSO_RS11140 SM01121 KSO_RS11140 KSO_RS11160 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KSO_RS11175 SM00220 Serine/Threonine protein kinases, catalytic domain KSO_RS11175 SM00740 KSO_RS11175 KSO_RS11180 SM00331 Sigma factor PP2C-like phosphatases KSO_RS11180 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_RS11205 SM00487 DEAD-like helicases superfamily KSO_RS11205 SM00490 helicase superfamily c-terminal domain KSO_RS11215 SM01409 KSO_RS11215 KSO_RS11220 SM00072 Guanylate kinase homologues. KSO_RS11235 SM00831 Cation transporter/ATPase, N-terminus KSO_RS11285 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_RS11300 SM00851 MGS-like domain KSO_RS11300 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_RS11305 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_RS11330 SM00363 S4 RNA-binding domain KSO_RS11360 SM00363 S4 RNA-binding domain KSO_RS11395 SM00382 ATPases associated with a variety of cellular activities KSO_RS11420 SM00864 Tubulin/FtsZ family, GTPase domain KSO_RS11420 SM00865 Tubulin/FtsZ family, C-terminal domain KSO_RS11425 SM00842 Cell division protein FtsA KSO_RS11465 SM00740 KSO_RS11465 KSO_RS11470 SM00740 KSO_RS11470 KSO_RS11575 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS11620 SM00878 Biotin carboxylase C-terminal domain KSO_RS11645 SM00670 Large family of predicted nucleotide-binding domains KSO_RS11665 SM00838 Elongation factor G C-terminus KSO_RS11745 SM00861 Transketolase, pyrimidine binding domain KSO_RS11760 SM00822 KSO_RS11760 KSO_RS11760 SM00823 Phosphopantetheine attachment site KSO_RS11760 SM01294 KSO_RS11760 KSO_RS11765 SM00822 KSO_RS11765 KSO_RS11765 SM00823 Phosphopantetheine attachment site KSO_RS11765 SM00825 Beta-ketoacyl synthase KSO_RS11765 SM01294 KSO_RS11765 KSO_RS11770 SM00822 KSO_RS11770 KSO_RS11770 SM00823 Phosphopantetheine attachment site KSO_RS11770 SM00825 Beta-ketoacyl synthase KSO_RS11770 SM01294 KSO_RS11770 KSO_RS11775 SM00822 KSO_RS11775 KSO_RS11775 SM00823 Phosphopantetheine attachment site KSO_RS11775 SM00825 Beta-ketoacyl synthase KSO_RS11775 SM01294 KSO_RS11775 KSO_RS11780 SM00822 KSO_RS11780 KSO_RS11780 SM00823 Phosphopantetheine attachment site KSO_RS11780 SM00825 Beta-ketoacyl synthase KSO_RS11780 SM01294 KSO_RS11780 KSO_RS11785 SM00822 KSO_RS11785 KSO_RS11785 SM00823 Phosphopantetheine attachment site KSO_RS11785 SM00825 Beta-ketoacyl synthase KSO_RS11785 SM00826 KSO_RS11785 KSO_RS11790 SM00822 KSO_RS11790 KSO_RS11790 SM00823 Phosphopantetheine attachment site KSO_RS11790 SM00825 Beta-ketoacyl synthase KSO_RS11790 SM00826 KSO_RS11790 KSO_RS11790 SM01294 KSO_RS11790 KSO_RS11795 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_RS11825 SM00849 Metallo-beta-lactamase superfamily KSO_RS11845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_RS11845 SM00091 PAS domain KSO_RS11845 SM00387 Histidine kinase-like ATPases KSO_RS11845 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS11850 SM00966 SpoVT / AbrB like domain KSO_RS11875 SM00382 ATPases associated with a variety of cellular activities KSO_RS11900 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS11900 SM01134 KSO_RS11900 KSO_RS11905 SM01066 Carbohydrate binding domain KSO_RS11910 SM00382 ATPases associated with a variety of cellular activities KSO_RS11940 SM00852 Probable molybdopterin binding domain KSO_RS12030 SM00052 Putative diguanylate phosphodiesterase KSO_RS12050 SM00257 Lysin motif KSO_RS12065 SM00260 Two component signalling adaptor domain KSO_RS12065 SM00448 cheY-homologous receiver domain KSO_RS12075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_RS12075 SM00091 PAS domain KSO_RS12075 SM00387 Histidine kinase-like ATPases KSO_RS12075 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS12100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS12100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS12130 SM01061 CAT RNA binding domain KSO_RS12135 SM00354 helix_turn _helix lactose operon repressor KSO_RS12215 SM00382 ATPases associated with a variety of cellular activities KSO_RS12215 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_RS12230 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS12235 SM00387 Histidine kinase-like ATPases KSO_RS12235 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS12250 SM01007 Class II Aldolase and Adducin N-terminal domain KSO_RS12290 SM00091 PAS domain KSO_RS12290 SM00387 Histidine kinase-like ATPases KSO_RS12290 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS12350 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen KSO_RS12365 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS12375 SM00422 helix_turn_helix, mercury resistance KSO_RS12380 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS12380 SM00924 MgtE intracellular N domain KSO_RS12385 SM00257 Lysin motif KSO_RS12385 SM00636 KSO_RS12385 KSO_RS12395 SM00382 ATPases associated with a variety of cellular activities KSO_RS12420 SM00100 Cyclic nucleotide-monophosphate binding domain KSO_RS12435 SM00028 Tetratricopeptide repeats KSO_RS12455 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS12470 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_RS12510 SM00382 ATPases associated with a variety of cellular activities KSO_RS12520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KSO_RS12535 SM00382 ATPases associated with a variety of cellular activities KSO_RS12560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_RS12605 SM00257 Lysin motif KSO_RS12605 SM00644 KSO_RS12605 KSO_RS12670 SM00257 Lysin motif KSO_RS12760 SM00382 ATPases associated with a variety of cellular activities KSO_RS12775 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS12795 SM00257 Lysin motif KSO_RS12795 SM00644 KSO_RS12795 KSO_RS12805 SM00028 Tetratricopeptide repeats KSO_RS12820 SM01260 KSO_RS12820 KSO_RS12825 SM00382 ATPases associated with a variety of cellular activities KSO_RS12830 SM01260 KSO_RS12830 KSO_RS12840 SM00421 helix_turn_helix, Lux Regulon KSO_RS12840 SM00448 cheY-homologous receiver domain KSO_RS12860 SM00382 ATPases associated with a variety of cellular activities KSO_RS12865 SM00387 Histidine kinase-like ATPases KSO_RS12865 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS12870 SM00448 cheY-homologous receiver domain KSO_RS12870 SM00862 Transcriptional regulatory protein, C terminal KSO_RS12875 SM00858 KSO_RS12875 KSO_RS12885 SM00354 helix_turn _helix lactose operon repressor KSO_RS12920 SM00382 ATPases associated with a variety of cellular activities KSO_RS12955 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_RS12955 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_RS12980 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS12995 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS12995 SM01134 KSO_RS12995 KSO_RS13035 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS13095 SM00257 Lysin motif KSO_RS13095 SM00644 KSO_RS13095 KSO_RS13210 SM00645 Papain family cysteine protease KSO_RS13255 SM00382 ATPases associated with a variety of cellular activities KSO_RS13315 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS13320 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS13370 SM00966 SpoVT / AbrB like domain KSO_RS13375 SM00382 ATPases associated with a variety of cellular activities KSO_RS13385 SM00849 Metallo-beta-lactamase superfamily KSO_RS13510 SM00954 Region found in RelA / SpoT proteins KSO_RS13520 SM01118 KSO_RS13520 KSO_RS13580 SM00382 ATPases associated with a variety of cellular activities KSO_RS13585 SM00382 ATPases associated with a variety of cellular activities KSO_RS13630 SM00382 ATPases associated with a variety of cellular activities KSO_RS13635 SM00382 ATPases associated with a variety of cellular activities KSO_RS13645 SM00825 Beta-ketoacyl synthase KSO_RS13700 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_RS13705 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_RS13725 SM00859 Semialdehyde dehydrogenase, NAD binding domain KSO_RS13780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS13780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS13790 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS13825 SM00354 helix_turn _helix lactose operon repressor KSO_RS13830 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS13955 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS13995 SM00894 Excalibur calcium-binding domain KSO_RS14020 SM00914 KSO_RS14020 KSO_RS14035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS14055 SM00855 Phosphoglycerate mutase family KSO_RS14100 SM00849 Metallo-beta-lactamase superfamily KSO_RS14180 SM00382 ATPases associated with a variety of cellular activities KSO_RS14210 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS14255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_RS14275 SM00382 ATPases associated with a variety of cellular activities KSO_RS14310 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_RS14360 SM00382 ATPases associated with a variety of cellular activities KSO_RS14365 SM00382 ATPases associated with a variety of cellular activities KSO_RS14420 SM01091 Transporter associated domain KSO_RS14425 SM00825 Beta-ketoacyl synthase KSO_RS14435 SM00422 helix_turn_helix, mercury resistance KSO_RS14440 SM01091 Transporter associated domain KSO_RS14445 SM00563 Phosphate acyltransferases KSO_RS14490 SM00257 Lysin motif KSO_RS14495 SM00098 Alkaline phosphatase homologues KSO_RS14515 SM00257 Lysin motif KSO_RS14535 SM00421 helix_turn_helix, Lux Regulon KSO_RS14535 SM00448 cheY-homologous receiver domain KSO_RS14540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KSO_RS14540 SM00387 Histidine kinase-like ATPases KSO_RS14585 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS14595 SM00363 S4 RNA-binding domain KSO_RS14635 SM00267 diguanylate cyclase KSO_RS14645 SM00357 Cold shock protein domain KSO_RS14655 SM00382 ATPases associated with a variety of cellular activities KSO_RS14660 SM00382 ATPases associated with a variety of cellular activities KSO_RS14665 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS14695 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS14705 SM00763 PrkA AAA domain KSO_RS14735 SM00567 E-Z type HEAT repeats KSO_RS14750 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS14775 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS14780 SM00382 ATPases associated with a variety of cellular activities KSO_RS14790 SM01060 KSO_RS14790 KSO_RS14795 SM00382 ATPases associated with a variety of cellular activities KSO_RS14800 SM00382 ATPases associated with a variety of cellular activities KSO_RS14970 SM00382 ATPases associated with a variety of cellular activities KSO_RS15000 SM00478 endonuclease III KSO_RS15000 SM00525 KSO_RS15000 KSO_RS15030 SM00287 Bacterial SH3 domain homologues KSO_RS15095 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS15150 SM00382 ATPases associated with a variety of cellular activities KSO_RS15155 SM00382 ATPases associated with a variety of cellular activities KSO_RS15180 SM00382 ATPases associated with a variety of cellular activities KSO_RS15195 SM00861 Transketolase, pyrimidine binding domain KSO_RS15225 SM00478 endonuclease III KSO_RS15290 SM00226 Low molecular weight phosphatase family KSO_RS15315 SM00354 helix_turn _helix lactose operon repressor KSO_RS15345 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS15345 SM00866 KSO_RS15345 KSO_RS15350 SM00642 Alpha-amylase domain KSO_RS15420 SM00849 Metallo-beta-lactamase superfamily KSO_RS15435 SM00448 cheY-homologous receiver domain KSO_RS15440 SM00091 PAS domain KSO_RS15440 SM00387 Histidine kinase-like ATPases KSO_RS15455 SM00448 cheY-homologous receiver domain KSO_RS15455 SM00862 Transcriptional regulatory protein, C terminal KSO_RS15460 SM00387 Histidine kinase-like ATPases KSO_RS15460 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS15460 SM00448 cheY-homologous receiver domain KSO_RS15495 SM00656 KSO_RS15495 KSO_RS15510 SM00829 Enoylreductase KSO_RS15520 SM00487 DEAD-like helicases superfamily KSO_RS15520 SM00490 helicase superfamily c-terminal domain KSO_RS15525 SM00382 ATPases associated with a variety of cellular activities KSO_RS15535 SM00422 helix_turn_helix, mercury resistance KSO_RS15540 SM00382 ATPases associated with a variety of cellular activities KSO_RS15555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_RS15620 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS15715 SM00382 ATPases associated with a variety of cellular activities KSO_RS15730 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_RS15745 SM00845 GatB domain KSO_RS15780 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_RS15780 SM00292 breast cancer carboxy-terminal domain KSO_RS15780 SM00532 Ligase N family KSO_RS15825 SM01209 KSO_RS15825 KSO_RS15825 SM01210 KSO_RS15825 KSO_RS15830 SM00798 AICARFT/IMPCHase bienzyme KSO_RS15830 SM00851 MGS-like domain KSO_RS15855 SM01211 KSO_RS15855 KSO_RS15870 SM00998 Adenylosuccinate lyase C-terminus KSO_RS15880 SM01001 AIR carboxylase KSO_RS15920 SM00460 Transglutaminase/protease-like homologues KSO_RS15965 SM00829 Enoylreductase KSO_RS16020 SM00829 Enoylreductase KSO_RS16025 SM00028 Tetratricopeptide repeats KSO_RS16025 SM00382 ATPases associated with a variety of cellular activities KSO_RS16050 SM00883 Chaperonin 10 Kd subunit KSO_RS16075 SM00881 CoA binding domain KSO_RS16085 SM00382 ATPases associated with a variety of cellular activities KSO_RS16155 SM00829 Enoylreductase KSO_RS16195 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16195 SM00895 KSO_RS16195 KSO_RS16200 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16200 SM00866 KSO_RS16200 KSO_RS16235 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16235 SM00895 KSO_RS16235 KSO_RS16240 SM01329 KSO_RS16240 KSO_RS16260 SM00422 helix_turn_helix, mercury resistance KSO_RS16275 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS16280 SM00825 Beta-ketoacyl synthase KSO_RS16305 SM00382 ATPases associated with a variety of cellular activities KSO_RS16320 SM00421 helix_turn_helix, Lux Regulon KSO_RS16320 SM00448 cheY-homologous receiver domain KSO_RS16325 SM00387 Histidine kinase-like ATPases KSO_RS16380 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16390 SM00422 helix_turn_helix, mercury resistance KSO_RS16395 SM00829 Enoylreductase KSO_RS16420 SM01130 KSO_RS16420 KSO_RS16475 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16485 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS16505 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS16505 SM00895 KSO_RS16505 KSO_RS16550 SM00450 Rhodanese Homology Domain KSO_RS16550 SM00849 Metallo-beta-lactamase superfamily KSO_RS16555 SM00450 Rhodanese Homology Domain KSO_RS16570 SM00357 Cold shock protein domain KSO_RS16600 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS16630 SM00860 SMI1 / KNR4 family KSO_RS16635 SM00901 KSO_RS16635 KSO_RS16695 SM00731 SprT homologues. KSO_RS16700 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS16700 SM00732 Likely ribonuclease with RNase H fold. KSO_RS16705 SM00331 Sigma factor PP2C-like phosphatases KSO_RS16705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_RS16725 SM00331 Sigma factor PP2C-like phosphatases KSO_RS16730 SM00387 Histidine kinase-like ATPases KSO_RS16755 SM01005 Alanine racemase, C-terminal domain KSO_RS16785 SM00487 DEAD-like helicases superfamily KSO_RS16785 SM00490 helicase superfamily c-terminal domain KSO_RS16830 SM00382 ATPases associated with a variety of cellular activities KSO_RS16845 SM00448 cheY-homologous receiver domain KSO_RS16850 SM00091 PAS domain KSO_RS16850 SM00387 Histidine kinase-like ATPases KSO_RS16965 SM00267 diguanylate cyclase KSO_RS16975 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KSO_RS16975 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KSO_RS16975 SM00493 KSO_RS16975 KSO_RS16980 SM00344 helix_turn_helix ASNC type KSO_RS17050 SM00346 helix_turn_helix isocitrate lyase regulation KSO_RS17055 SM00797 Allophanate hydrolase subunit 2 KSO_RS17060 SM00796 Allophanate hydrolase subunit 1 KSO_RS17110 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_RS17145 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_RS17150 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_RS17180 SM00382 ATPases associated with a variety of cellular activities KSO_RS17205 SM00028 Tetratricopeptide repeats KSO_RS17210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_RS17210 SM00387 Histidine kinase-like ATPases KSO_RS17210 SM00388 His Kinase A (phosphoacceptor) domain KSO_RS17215 SM00448 cheY-homologous receiver domain KSO_RS17215 SM00862 Transcriptional regulatory protein, C terminal KSO_RS17225 SM00382 ATPases associated with a variety of cellular activities KSO_RS17240 SM00382 ATPases associated with a variety of cellular activities KSO_RS17250 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS17285 SM00710 Parallel beta-helix repeats KSO_RS17285 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses KSO_RS17320 SM00062 Bacterial periplasmic substrate-binding proteins KSO_RS17330 SM00382 ATPases associated with a variety of cellular activities KSO_RS17355 SM00823 Phosphopantetheine attachment site KSO_RS17360 SM00823 Phosphopantetheine attachment site KSO_RS17370 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_RS17410 SM00833 Cobalamin synthesis protein cobW C-terminal domain KSO_RS17515 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS17530 SM00632 KSO_RS17530 KSO_RS17530 SM00642 Alpha-amylase domain KSO_RS17560 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS17560 SM00382 ATPases associated with a variety of cellular activities KSO_RS17610 SM00382 ATPases associated with a variety of cellular activities KSO_RS17620 SM00642 Alpha-amylase domain KSO_RS17630 SM00028 Tetratricopeptide repeats KSO_RS17755 SM00448 cheY-homologous receiver domain KSO_RS17760 SM00387 Histidine kinase-like ATPases KSO_RS17795 SM00450 Rhodanese Homology Domain KSO_RS17830 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS17920 SM00382 ATPases associated with a variety of cellular activities KSO_RS17925 SM00421 helix_turn_helix, Lux Regulon KSO_RS17925 SM00448 cheY-homologous receiver domain KSO_RS17945 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_RS18080 SM00342 helix_turn_helix, arabinose operon control protein KSO_RS18115 SM00829 Enoylreductase KSO_RS18255 SM01251 KSO_RS18255 KSO_RS18270 SM00646 KSO_RS18270 KSO_RS18310 SM00382 ATPases associated with a variety of cellular activities KSO_RS18315 SM00382 ATPases associated with a variety of cellular activities KSO_RS18325 SM00662 RNA polymerases D KSO_RS18345 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS18400 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KSO_RS18405 SM01374 KSO_RS18405 KSO_RS18425 SM00322 K homology RNA-binding domain KSO_RS18440 SM01382 KSO_RS18440 KSO_RS18440 SM01383 KSO_RS18440 KSO_RS18460 SM01403 KSO_RS18460 KSO_RS18475 SM00838 Elongation factor G C-terminus KSO_RS18475 SM00889 Elongation factor G, domain IV KSO_RS18495 SM00663 RNA polymerase I subunit A N-terminus KSO_RS18525 SM00649 Ribosomal protein L11/L12 KSO_RS18530 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KSO_RS18530 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KSO_RS18555 SM00967 RNA 2'-O ribose methyltransferase substrate binding KSO_RS18560 SM00535 Ribonuclease III family KSO_RS18565 SM00840 KSO_RS18565 KSO_RS18590 SM00670 Large family of predicted nucleotide-binding domains KSO_RS18600 SM00382 ATPases associated with a variety of cellular activities KSO_RS18605 SM00382 ATPases associated with a variety of cellular activities KSO_RS18605 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_RS18710 SM00530 Helix-turn-helix XRE-family like proteins KSO_RS18720 SM00905 Dihydroneopterin aldolase KSO_RS18765 SM00382 ATPases associated with a variety of cellular activities KSO_RS18775 SM00977 TilS substrate C-terminal domain KSO_RS18780 SM00220 Serine/Threonine protein kinases, catalytic domain KSO_RS18790 SM00331 Sigma factor PP2C-like phosphatases KSO_RS18790 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_RS18805 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_RS18825 SM00363 S4 RNA-binding domain KSO_RS18840 SM00966 SpoVT / AbrB like domain KSO_RS18845 SM00487 DEAD-like helicases superfamily KSO_RS18845 SM00490 helicase superfamily c-terminal domain KSO_RS18845 SM00982 KSO_RS18845 KSO_RS18845 SM01058 CarD-like/TRCF domain KSO_RS18865 SM01400 KSO_RS18865 KSO_RS18910 SM00650 Ribosomal RNA adenine dimethylases KSO_RS18915 SM00493 KSO_RS18915 KSO_RS18920 SM01208 KSO_RS18920 KSO_RS18935 SM00966 SpoVT / AbrB like domain KSO_RS18945 SM00465 GIY-YIG type nucleases (URI domain) KSO_RS19040 SM00493 KSO_RS19040 KSO_RS19050 SM00382 ATPases associated with a variety of cellular activities KSO_RS19065 SM00257 Lysin motif KSO_RS19065 SM00636 KSO_RS19065 KSO_RS19105 SM00936 Penicillin-binding protein 5, C-terminal domain KSO_RS19110 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_RS19110 SM01240 KSO_RS19110 KSO_RS19145 SM00434 DNA Topoisomerase IV KSO_RS19150 SM00387 Histidine kinase-like ATPases KSO_RS19150 SM00433 TopoisomeraseII KSO_RS19170 SM00480 DNA polymerase III beta subunit KSO_RS19175 SM00382 ATPases associated with a variety of cellular activities KSO_RS19175 SM00760 Bacterial dnaA protein helix-turn-helix domain