locus-tag class description LL3_RS00005 PF00308 Bacterial dnaA protein LL3_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LL3_RS00005 PF11638 DnaA N-terminal domain LL3_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LL3_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LL3_RS00010 PF02767 DNA polymerase III beta subunit, central domain LL3_RS00020 PF02463 RecF/RecN/SMC N terminal domain LL3_RS00025 PF04025 Domain of unknown function (DUF370) LL3_RS00030 PF00204 DNA gyrase B LL3_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS00030 PF01751 Toprim domain LL3_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus LL3_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller LL3_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A LL3_RS00065 PF14175 YaaC-like Protein LL3_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain LL3_RS00070 PF00571 CBS domain LL3_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain LL3_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase LL3_RS00080 PF01680 SOR/SNZ family LL3_RS00085 PF01174 SNO glutamine amidotransferase family LL3_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain LL3_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL3_RS00095 PF02595 Glycerate kinase family LL3_RS00105 PF01712 Deoxynucleoside kinase LL3_RS00110 PF01712 Deoxynucleoside kinase LL3_RS00115 PF00704 Glycosyl hydrolases family 18 LL3_RS00115 PF01476 LysM domain LL3_RS00120 PF00857 Isochorismatase family LL3_RS00125 PF14437 MafB19-like deaminase LL3_RS00130 PF12169 DNA polymerase III subunits gamma and tau domain III LL3_RS00135 PF02575 YbaB/EbfC DNA-binding family LL3_RS00140 PF13662 Toprim domain LL3_RS00140 PF02132 RecR protein LL3_RS00145 PF10704 Protein of unknown function (DUF2508) LL3_RS00150 PF07441 SigmaK-factor processing regulatory protein BofA LL3_RS00180 PF10764 Inhibitor of sigma-G Gin LL3_RS00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LL3_RS00190 PF05816 Toxic anion resistance protein (TelA) LL3_RS00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LL3_RS00195 PF01276 Orn/Lys/Arg decarboxylase, major domain LL3_RS00200 PF02223 Thymidylate kinase LL3_RS00205 PF06153 Cyclic-di-AMP receptor LL3_RS00210 PF03885 Protein of unknown function (DUF327) LL3_RS00215 PF09115 DNA polymerase III, delta subunit, C terminal LL3_RS00220 PF04468 PSP1 C-terminal conserved region LL3_RS00225 PF06156 Initiation control protein YabA LL3_RS00230 PF05175 Methyltransferase small domain LL3_RS00235 PF01541 GIY-YIG catalytic domain LL3_RS00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL3_RS00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LL3_RS00245 PF18277 AbrB C-terminal domain LL3_RS00250 PF09334 tRNA synthetases class I (M) LL3_RS00250 PF08264 Anticodon-binding domain of tRNA LL3_RS00250 PF01588 Putative tRNA binding domain LL3_RS00255 PF01026 TatD related DNase LL3_RS00260 PF03990 G5-linked-Ubiquitin-like domain LL3_RS00260 PF06725 3D domain LL3_RS00260 PF07501 G5 domain LL3_RS00265 PF13662 Toprim domain LL3_RS00265 PF13331 Domain of unknown function (DUF4093) LL3_RS00270 PF00398 Ribosomal RNA adenine dimethylase LL3_RS00275 PF05582 YabG peptidase U57 LL3_RS00280 PF06257 Biofilm formation stimulator VEG LL3_RS00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type LL3_RS00290 PF08544 GHMP kinases C terminal LL3_RS00290 PF00288 GHMP kinases N terminal domain LL3_RS00295 PF00156 Phosphoribosyl transferase domain LL3_RS00295 PF09182 Bacterial purine repressor, N-terminal LL3_RS00300 PF01042 Endoribonuclease L-PSP LL3_RS00305 PF04026 SpoVG LL3_RS00310 PF00132 Bacterial transferase hexapeptide (six repeats) LL3_RS00310 PF00483 Nucleotidyl transferase LL3_RS00315 PF14572 Phosphoribosyl synthetase-associated domain LL3_RS00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LL3_RS00320 PF14693 Ribosomal protein TL5, C-terminal domain LL3_RS00320 PF01386 Ribosomal L25p family LL3_RS00325 PF01195 Peptidyl-tRNA hydrolase LL3_RS00330 PF10955 Protein of unknown function (DUF2757) LL3_RS00335 PF00270 DEAD/DEAH box helicase LL3_RS00335 PF17757 UvrB interaction domain LL3_RS00335 PF03461 TRCF domain LL3_RS00335 PF00271 Helicase conserved C-terminal domain LL3_RS00335 PF02559 CarD-like/TRCF domain LL3_RS00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor LL3_RS00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LL3_RS00345 PF14667 Polysaccharide biosynthesis C-terminal domain LL3_RS00345 PF01943 Polysaccharide biosynthesis protein LL3_RS00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL3_RS00350 PF03819 MazG nucleotide pyrophosphohydrolase domain LL3_RS00355 PF01479 S4 domain LL3_RS00360 PF07873 YabP family LL3_RS00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) LL3_RS00370 PF04977 Septum formation initiator LL3_RS00375 PF00575 S1 RNA binding domain LL3_RS00390 PF07228 Stage II sporulation protein E (SpoIIE) LL3_RS00395 PF00092 von Willebrand factor type A domain LL3_RS00400 PF00069 Protein kinase domain LL3_RS00405 PF11734 TilS substrate C-terminal domain LL3_RS00405 PF09179 TilS substrate binding domain LL3_RS00405 PF01171 PP-loop family LL3_RS00410 PF00156 Phosphoribosyl transferase domain LL3_RS00415 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS00415 PF17862 AAA+ lid domain LL3_RS00415 PF06480 FtsH Extracellular LL3_RS00415 PF01434 Peptidase family M41 LL3_RS00420 PF03309 Type III pantothenate kinase LL3_RS00425 PF01430 Hsp33 protein LL3_RS00430 PF13145 PPIC-type PPIASE domain LL3_RS00435 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS00440 PF00425 chorismate binding enzyme LL3_RS00440 PF04715 Anthranilate synthase component I, N terminal region LL3_RS00445 PF00117 Glutamine amidotransferase class-I LL3_RS00450 PF01063 Amino-transferase class IV LL3_RS00455 PF00809 Pterin binding enzyme LL3_RS00460 PF02152 Dihydroneopterin aldolase LL3_RS00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LL3_RS00470 PF01381 Helix-turn-helix LL3_RS00475 PF01207 Dihydrouridine synthase (Dus) LL3_RS00480 PF01336 OB-fold nucleic acid binding domain LL3_RS00480 PF00152 tRNA synthetases class II (D, K and N) LL3_RS00500 PF05848 CtsR N-terminal HTH domain LL3_RS00500 PF17727 CtsR C-terminal dimerization domain LL3_RS00505 PF02151 UvrB/uvrC motif LL3_RS00510 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LL3_RS00515 PF17871 AAA lid domain LL3_RS00515 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS00515 PF07724 AAA domain (Cdc48 subfamily) LL3_RS00515 PF02861 Clp amino terminal domain, pathogenicity island component LL3_RS00515 PF10431 C-terminal, D2-small domain, of ClpB protein LL3_RS00520 PF18073 Rubredoxin metal binding domain LL3_RS00525 PF10635 DisA bacterial checkpoint controller linker region LL3_RS00525 PF02457 DisA bacterial checkpoint controller nucleotide-binding LL3_RS00535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LL3_RS00540 PF02542 YgbB family LL3_RS00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LL3_RS00550 PF06426 Serine acetyltransferase, N-terminal LL3_RS00550 PF00132 Bacterial transferase hexapeptide (six repeats) LL3_RS00555 PF09190 DALR domain LL3_RS00555 PF01406 tRNA synthetases class I (C) catalytic domain LL3_RS00560 PF00636 Ribonuclease III domain LL3_RS00565 PF08032 RNA 2'-O ribose methyltransferase substrate binding LL3_RS00565 PF00588 SpoU rRNA Methylase family LL3_RS00570 PF05991 YacP-like NYN domain LL3_RS00575 PF08281 Sigma-70, region 4 LL3_RS00575 PF04542 Sigma-70 region 2 LL3_RS00580 PF00471 Ribosomal protein L33 LL3_RS00585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LL3_RS00590 PF02357 Transcription termination factor nusG LL3_RS00590 PF00467 KOW motif LL3_RS00595 PF03946 Ribosomal protein L11, N-terminal domain LL3_RS00595 PF00298 Ribosomal protein L11, RNA binding domain LL3_RS00600 PF00687 Ribosomal protein L1p/L10e family LL3_RS00605 PF00466 Ribosomal protein L10 LL3_RS00610 PF00542 Ribosomal protein L7/L12 C-terminal domain LL3_RS00610 PF16320 Ribosomal protein L7/L12 dimerisation domain LL3_RS00615 PF05175 Methyltransferase small domain LL3_RS00620 PF04560 RNA polymerase Rpb2, domain 7 LL3_RS00620 PF10385 RNA polymerase beta subunit external 1 domain LL3_RS00620 PF04565 RNA polymerase Rpb2, domain 3 LL3_RS00620 PF04561 RNA polymerase Rpb2, domain 2 LL3_RS00620 PF04563 RNA polymerase beta subunit LL3_RS00620 PF00562 RNA polymerase Rpb2, domain 6 LL3_RS00625 PF04998 RNA polymerase Rpb1, domain 5 LL3_RS00625 PF04997 RNA polymerase Rpb1, domain 1 LL3_RS00625 PF05000 RNA polymerase Rpb1, domain 4 LL3_RS00625 PF00623 RNA polymerase Rpb1, domain 2 LL3_RS00625 PF04983 RNA polymerase Rpb1, domain 3 LL3_RS00630 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LL3_RS00635 PF00164 Ribosomal protein S12/S23 LL3_RS00640 PF00177 Ribosomal protein S7p/S5e LL3_RS00645 PF03764 Elongation factor G, domain IV LL3_RS00645 PF00009 Elongation factor Tu GTP binding domain LL3_RS00645 PF03144 Elongation factor Tu domain 2 LL3_RS00645 PF14492 Elongation Factor G, domain II LL3_RS00645 PF00679 Elongation factor G C-terminus LL3_RS00650 PF03143 Elongation factor Tu C-terminal domain LL3_RS00650 PF03144 Elongation factor Tu domain 2 LL3_RS00650 PF00009 Elongation factor Tu GTP binding domain LL3_RS00655 PF12146 Serine aminopeptidase, S33 LL3_RS00660 PF00338 Ribosomal protein S10p/S20e LL3_RS00665 PF00297 Ribosomal protein L3 LL3_RS00670 PF00573 Ribosomal protein L4/L1 family LL3_RS00675 PF00276 Ribosomal protein L23 LL3_RS00680 PF00181 Ribosomal Proteins L2, RNA binding domain LL3_RS00680 PF03947 Ribosomal Proteins L2, C-terminal domain LL3_RS00685 PF00203 Ribosomal protein S19 LL3_RS00690 PF00237 Ribosomal protein L22p/L17e LL3_RS00695 PF00189 Ribosomal protein S3, C-terminal domain LL3_RS00695 PF07650 KH domain LL3_RS00700 PF00252 Ribosomal protein L16p/L10e LL3_RS00705 PF00831 Ribosomal L29 protein LL3_RS00710 PF00366 Ribosomal protein S17 LL3_RS00715 PF00238 Ribosomal protein L14p/L23e LL3_RS00720 PF00467 KOW motif LL3_RS00720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LL3_RS00725 PF00673 ribosomal L5P family C-terminus LL3_RS00725 PF00281 Ribosomal protein L5 LL3_RS00730 PF00410 Ribosomal protein S8 LL3_RS00735 PF00347 Ribosomal protein L6 LL3_RS00740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LL3_RS00745 PF00333 Ribosomal protein S5, N-terminal domain LL3_RS00745 PF03719 Ribosomal protein S5, C-terminal domain LL3_RS00750 PF00327 Ribosomal protein L30p/L7e LL3_RS00755 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LL3_RS00760 PF00344 SecY translocase LL3_RS00765 PF05191 Adenylate kinase, active site lid LL3_RS00770 PF00557 Metallopeptidase family M24 LL3_RS00775 PF01176 Translation initiation factor 1A / IF-1 LL3_RS00780 PF00444 Ribosomal protein L36 LL3_RS00785 PF00416 Ribosomal protein S13/S18 LL3_RS00790 PF00411 Ribosomal protein S11 LL3_RS00795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LL3_RS00795 PF01000 RNA polymerase Rpb3/RpoA insert domain LL3_RS00795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LL3_RS00800 PF01196 Ribosomal protein L17 LL3_RS00805 PF00005 ABC transporter LL3_RS00810 PF00005 ABC transporter LL3_RS00815 PF02361 Cobalt transport protein LL3_RS00820 PF01416 tRNA pseudouridine synthase LL3_RS00825 PF00572 Ribosomal protein L13 LL3_RS00830 PF00380 Ribosomal protein S9/S16 LL3_RS00835 PF08241 Methyltransferase domain LL3_RS00840 PF10730 Protein of unknown function (DUF2521) LL3_RS00845 PF01520 N-acetylmuramoyl-L-alanine amidase LL3_RS00850 PF10609 NUBPL iron-transfer P-loop NTPase LL3_RS00855 PF17898 Spore germination GerD central core domain LL3_RS00860 PF14089 KinB-signalling pathway activation in sporulation LL3_RS00865 PF01522 Polysaccharide deacetylase LL3_RS00885 PF07690 Major Facilitator Superfamily LL3_RS00890 PF00202 Aminotransferase class-III LL3_RS00900 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS00900 PF00107 Zinc-binding dehydrogenase LL3_RS00905 PF01740 STAS domain LL3_RS00905 PF00916 Sulfate permease family LL3_RS00910 PF01758 Sodium Bile acid symporter family LL3_RS00915 PF00756 Putative esterase LL3_RS00920 PF01032 FecCD transport family LL3_RS00925 PF01032 FecCD transport family LL3_RS00930 PF01497 Periplasmic binding protein LL3_RS00935 PF01497 Periplasmic binding protein LL3_RS00935 PF12833 Helix-turn-helix domain LL3_RS00940 PF07075 Protein of unknown function (DUF1343) LL3_RS00945 PF00933 Glycosyl hydrolase family 3 N terminal domain LL3_RS00945 PF01915 Glycosyl hydrolase family 3 C-terminal domain LL3_RS00950 PF00144 Beta-lactamase LL3_RS00955 PF00367 phosphotransferase system, EIIB LL3_RS00955 PF02378 Phosphotransferase system, EIIC LL3_RS00960 PF01380 SIS domain LL3_RS00970 PF04463 Protein of unknown function (DUF523) LL3_RS01000 PF08281 Sigma-70, region 4 LL3_RS01000 PF04542 Sigma-70 region 2 LL3_RS01005 PF13490 Putative zinc-finger LL3_RS01010 PF02457 DisA bacterial checkpoint controller nucleotide-binding LL3_RS01015 PF07949 YbbR-like protein LL3_RS01020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LL3_RS01020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LL3_RS01020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LL3_RS01020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LL3_RS01025 PF01380 SIS domain LL3_RS01050 PF16226 Domain of unknown function (DUF4885) LL3_RS01055 PF00248 Aldo/keto reductase family LL3_RS01060 PF04172 LrgB-like family LL3_RS01065 PF03788 LrgA family LL3_RS01070 PF01047 MarR family LL3_RS01075 PF00324 Amino acid permease LL3_RS01080 PF13419 Haloacid dehalogenase-like hydrolase LL3_RS01085 PF07730 Histidine kinase LL3_RS01090 PF00072 Response regulator receiver domain LL3_RS01090 PF00196 Bacterial regulatory proteins, luxR family LL3_RS01095 PF00005 ABC transporter LL3_RS01115 PF16219 Domain of unknown function (DUF4879) LL3_RS01120 PF17334 Minor curli fiber component A LL3_RS01135 PF13520 Amino acid permease LL3_RS01140 PF10852 Protein of unknown function (DUF2651) LL3_RS01145 PF03009 Glycerophosphoryl diester phosphodiesterase family LL3_RS01150 PF07690 Major Facilitator Superfamily LL3_RS01155 PF10852 Protein of unknown function (DUF2651) LL3_RS01160 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LL3_RS01160 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LL3_RS01175 PF00465 Iron-containing alcohol dehydrogenase LL3_RS01180 PF02222 ATP-grasp domain LL3_RS01185 PF01066 CDP-alcohol phosphatidyltransferase LL3_RS01190 PF09335 SNARE associated Golgi protein LL3_RS01195 PF02666 Phosphatidylserine decarboxylase LL3_RS01205 PF12368 Rhodanase C-terminal LL3_RS01205 PF17773 UPF0176 acylphosphatase like domain LL3_RS01205 PF00581 Rhodanese-like domain LL3_RS01210 PF00375 Sodium:dicarboxylate symporter family LL3_RS01215 PF01063 Amino-transferase class IV LL3_RS01220 PF00324 Amino acid permease LL3_RS01225 PF02574 Homocysteine S-methyltransferase LL3_RS01230 PF01235 Sodium:alanine symporter family LL3_RS01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS01245 PF00072 Response regulator receiver domain LL3_RS01245 PF08664 YcbB domain LL3_RS01250 PF01636 Phosphotransferase enzyme family LL3_RS01255 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein LL3_RS01265 PF16916 Dimerisation domain of Zinc Transporter LL3_RS01265 PF01545 Cation efflux family LL3_RS01270 PF00881 Nitroreductase family LL3_RS01280 PF07681 DoxX LL3_RS01285 PF00085 Thioredoxin LL3_RS01300 PF07486 Cell Wall Hydrolase LL3_RS01305 PF16655 PhoD-like phosphatase, N-terminal domain LL3_RS01305 PF09423 PhoD-like phosphatase LL3_RS01310 PF02416 mttA/Hcf106 family LL3_RS01315 PF00902 Sec-independent protein translocase protein (TatC) LL3_RS01320 PF01470 Pyroglutamyl peptidase LL3_RS01325 PF00266 Aminotransferase class-V LL3_RS01330 PF07690 Major Facilitator Superfamily LL3_RS01335 PF00440 Bacterial regulatory proteins, tetR family LL3_RS01345 PF05225 helix-turn-helix, Psq domain LL3_RS01345 PF02810 SEC-C motif LL3_RS01350 PF00248 Aldo/keto reductase family LL3_RS01355 PF11611 Domain of unknown function (DUF4352) LL3_RS01355 PF17118 Domain of unknown function (DUF5105) LL3_RS01360 PF16244 Domain of unknown function (DUF4901) LL3_RS01365 PF16244 Domain of unknown function (DUF4901) LL3_RS01370 PF13539 D-alanyl-D-alanine carboxypeptidase LL3_RS01375 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS01385 PF00128 Alpha amylase, catalytic domain LL3_RS01395 PF03551 Transcriptional regulator PadR-like family LL3_RS01395 PF10400 Virulence activator alpha C-term LL3_RS01400 PF01297 Zinc-uptake complex component A periplasmic LL3_RS01405 PF00005 ABC transporter LL3_RS01410 PF00950 ABC 3 transport family LL3_RS01415 PF00296 Luciferase-like monooxygenase LL3_RS01420 PF02342 TerD domain LL3_RS01425 PF02342 TerD domain LL3_RS01430 PF02342 TerD domain LL3_RS01435 PF03741 Integral membrane protein TerC family LL3_RS01440 PF14266 Putative component of 'biosynthetic module' LL3_RS01445 PF05816 Toxic anion resistance protein (TelA) LL3_RS01450 PF07690 Major Facilitator Superfamily LL3_RS01455 PF00571 CBS domain LL3_RS01455 PF00005 ABC transporter LL3_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS01465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LL3_RS01470 PF01546 Peptidase family M20/M25/M40 LL3_RS01470 PF07687 Peptidase dimerisation domain LL3_RS01475 PF03606 C4-dicarboxylate anaerobic carrier LL3_RS01485 PF06271 RDD family LL3_RS01490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LL3_RS01490 PF00056 lactate/malate dehydrogenase, NAD binding domain LL3_RS01495 PF07690 Major Facilitator Superfamily LL3_RS01500 PF01047 MarR family LL3_RS01515 PF00324 Amino acid permease LL3_RS01525 PF02540 NAD synthase LL3_RS01530 PF01261 Xylose isomerase-like TIM barrel LL3_RS01535 PF07690 Major Facilitator Superfamily LL3_RS01540 PF01202 Shikimate kinase LL3_RS01545 PF05448 Acetyl xylan esterase (AXE1) LL3_RS01550 PF10127 RNA repair pathway DNA polymerase beta family LL3_RS01555 PF01619 Proline dehydrogenase LL3_RS01560 PF00171 Aldehyde dehydrogenase family LL3_RS01565 PF00474 Sodium:solute symporter family LL3_RS01570 PF13556 PucR C-terminal helix-turn-helix domain LL3_RS01570 PF17853 GGDEF-like domain LL3_RS01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS01580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL3_RS01585 PF00355 Rieske [2Fe-2S] domain LL3_RS01590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL3_RS01590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL3_RS01590 PF04324 BFD-like [2Fe-2S] binding domain LL3_RS01590 PF18267 Rubredoxin NAD+ reductase C-terminal domain LL3_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS01595 PF07690 Major Facilitator Superfamily LL3_RS01600 PF02492 CobW/HypB/UreG, nucleotide-binding domain LL3_RS01600 PF07683 Cobalamin synthesis protein cobW C-terminal domain LL3_RS01605 PF00107 Zinc-binding dehydrogenase LL3_RS01605 PF13823 Alcohol dehydrogenase GroES-associated LL3_RS01605 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS01610 PF06271 RDD family LL3_RS01615 PF10925 Protein of unknown function (DUF2680) LL3_RS01620 PF00232 Glycosyl hydrolase family 1 LL3_RS01625 PF11033 Competence protein J (ComJ) LL3_RS01630 PF14040 Deoxyribonuclease NucA/NucB LL3_RS01635 PF01380 SIS domain LL3_RS01640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LL3_RS01645 PF01638 HxlR-like helix-turn-helix LL3_RS01655 PF00501 AMP-binding enzyme LL3_RS01655 PF00550 Phosphopantetheine attachment site LL3_RS01655 PF13193 AMP-binding enzyme C-terminal domain LL3_RS01655 PF00668 Condensation domain LL3_RS01660 PF13193 AMP-binding enzyme C-terminal domain LL3_RS01660 PF00501 AMP-binding enzyme LL3_RS01660 PF00550 Phosphopantetheine attachment site LL3_RS01660 PF00668 Condensation domain LL3_RS01665 PF00668 Condensation domain LL3_RS01665 PF00550 Phosphopantetheine attachment site LL3_RS01665 PF00975 Thioesterase domain LL3_RS01665 PF00501 AMP-binding enzyme LL3_RS01665 PF13193 AMP-binding enzyme C-terminal domain LL3_RS01670 PF00975 Thioesterase domain LL3_RS01680 PF01648 4'-phosphopantetheinyl transferase superfamily LL3_RS01690 PF00005 ABC transporter LL3_RS01695 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS01700 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL3_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS01705 PF03466 LysR substrate binding domain LL3_RS01710 PF02441 Flavoprotein LL3_RS01715 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LL3_RS01730 PF00854 POT family LL3_RS01735 PF12708 Pectate lyase superfamily protein LL3_RS01735 PF13229 Right handed beta helix region LL3_RS01745 PF03323 Bacillus/Clostridium GerA spore germination protein LL3_RS01750 PF05504 Spore germination B3/ GerAC like, C-terminal LL3_RS01755 PF03845 Spore germination protein LL3_RS01760 PF00296 Luciferase-like monooxygenase LL3_RS01765 PF00583 Acetyltransferase (GNAT) family LL3_RS01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL3_RS01780 PF00005 ABC transporter LL3_RS01785 PF07687 Peptidase dimerisation domain LL3_RS01785 PF01546 Peptidase family M20/M25/M40 LL3_RS01790 PF03972 MmgE/PrpD family LL3_RS01795 PF00005 ABC transporter LL3_RS01800 PF12704 MacB-like periplasmic core domain LL3_RS01800 PF02687 FtsX-like permease family LL3_RS01805 PF00072 Response regulator receiver domain LL3_RS01805 PF00486 Transcriptional regulatory protein, C terminal LL3_RS01810 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS01810 PF00672 HAMP domain LL3_RS01815 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS01820 PF11131 Rap-phr extracellular signalling LL3_RS01830 PF13840 ACT domain LL3_RS01830 PF00696 Amino acid kinase family LL3_RS01835 PF01032 FecCD transport family LL3_RS01840 PF01032 FecCD transport family LL3_RS01845 PF00005 ABC transporter LL3_RS01850 PF01497 Periplasmic binding protein LL3_RS01855 PF07690 Major Facilitator Superfamily LL3_RS01860 PF00440 Bacterial regulatory proteins, tetR family LL3_RS01865 PF00881 Nitroreductase family LL3_RS01870 PF03992 Antibiotic biosynthesis monooxygenase LL3_RS01875 PF01022 Bacterial regulatory protein, arsR family LL3_RS01880 PF00155 Aminotransferase class I and II LL3_RS01880 PF00392 Bacterial regulatory proteins, gntR family LL3_RS01885 PF00202 Aminotransferase class-III LL3_RS01890 PF00171 Aldehyde dehydrogenase family LL3_RS01895 PF06800 Sugar transport protein LL3_RS01905 PF07987 Domain of unkown function (DUF1775) LL3_RS01910 PF13115 YtkA-like LL3_RS01910 PF05425 Copper resistance protein D LL3_RS01910 PF04234 CopC domain LL3_RS01915 PF05573 NosL LL3_RS01915 PF08220 DeoR-like helix-turn-helix domain LL3_RS01925 PF02378 Phosphotransferase system, EIIC LL3_RS01925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS01930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL3_RS01935 PF08125 Mannitol dehydrogenase C-terminal domain LL3_RS01935 PF01232 Mannitol dehydrogenase Rossmann domain LL3_RS01940 PF07977 FabA-like domain LL3_RS01950 PF03746 LamB/YcsF family LL3_RS01955 PF01566 Natural resistance-associated macrophage protein LL3_RS01960 PF07286 Protein of unknown function (DUF1445) LL3_RS01965 PF02682 Carboxyltransferase domain, subdomain C and D LL3_RS01970 PF02626 Carboxyltransferase domain, subdomain A and B LL3_RS01975 PF01614 Bacterial transcriptional regulator LL3_RS01975 PF09339 IclR helix-turn-helix domain LL3_RS01980 PF13472 GDSL-like Lipase/Acylhydrolase family LL3_RS01985 PF13129 Protein of unknown function (DUF3953) LL3_RS01990 PF03992 Antibiotic biosynthesis monooxygenase LL3_RS01995 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS01995 PF00905 Penicillin binding protein transpeptidase domain LL3_RS01995 PF05223 NTF2-like N-terminal transpeptidase domain LL3_RS02000 PF00248 Aldo/keto reductase family LL3_RS02005 PF05043 Mga helix-turn-helix domain LL3_RS02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL3_RS02005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS02005 PF00874 PRD domain LL3_RS02005 PF08279 HTH domain LL3_RS02010 PF13193 AMP-binding enzyme C-terminal domain LL3_RS02010 PF00501 AMP-binding enzyme LL3_RS02025 PF13302 Acetyltransferase (GNAT) domain LL3_RS02030 PF16242 Pyridoxamine 5'-phosphate oxidase like LL3_RS02035 PF10997 Alternate to MurJ LL3_RS02040 PF12823 Domain of unknown function (DUF3817) LL3_RS02045 PF01037 Lrp/AsnC ligand binding domain LL3_RS02050 PF01751 Toprim domain LL3_RS02050 PF01131 DNA topoisomerase LL3_RS02060 PF00990 Diguanylate cyclase, GGDEF domain LL3_RS02065 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LL3_RS02075 PF03170 Bacterial cellulose synthase subunit LL3_RS02080 PF13520 Amino acid permease LL3_RS02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL3_RS02085 PF00205 Thiamine pyrophosphate enzyme, central domain LL3_RS02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL3_RS02095 PF01476 LysM domain LL3_RS02095 PF05257 CHAP domain LL3_RS02115 PF13176 Tetratricopeptide repeat LL3_RS02115 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS02120 PF10676 Spore germination protein gerPA/gerPF LL3_RS02130 PF01566 Natural resistance-associated macrophage protein LL3_RS02145 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LL3_RS02150 PF17314 Family of unknown function (DUF5360) LL3_RS02155 PF00893 Small Multidrug Resistance protein LL3_RS02160 PF12787 EcsC protein family LL3_RS02165 PF10685 Stress-induced bacterial acidophilic repeat motif LL3_RS02165 PF00477 Small hydrophilic plant seed protein LL3_RS02170 PF07883 Cupin domain LL3_RS02175 PF16291 Domain of unknown function (DUF4937 LL3_RS02180 PF05067 Manganese containing catalase LL3_RS02185 PF03480 Bacterial extracellular solute-binding protein, family 7 LL3_RS02190 PF17203 Single cache domain 3 LL3_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS02190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL3_RS02195 PF00072 Response regulator receiver domain LL3_RS02195 PF08279 HTH domain LL3_RS02200 PF00375 Sodium:dicarboxylate symporter family LL3_RS02205 PF01594 AI-2E family transporter LL3_RS02210 PF00005 ABC transporter LL3_RS02235 PF01545 Cation efflux family LL3_RS02235 PF16916 Dimerisation domain of Zinc Transporter LL3_RS02240 PF00085 Thioredoxin LL3_RS02245 PF01820 D-ala D-ala ligase N-terminus LL3_RS02245 PF07478 D-ala D-ala ligase C-terminus LL3_RS02250 PF02875 Mur ligase family, glutamate ligase domain LL3_RS02250 PF01225 Mur ligase family, catalytic domain LL3_RS02250 PF08245 Mur ligase middle domain LL3_RS02255 PF00271 Helicase conserved C-terminal domain LL3_RS02255 PF00270 DEAD/DEAH box helicase LL3_RS02260 PF03703 Bacterial PH domain LL3_RS02265 PF03703 Bacterial PH domain LL3_RS02270 PF01694 Rhomboid family LL3_RS02275 PF01648 4'-phosphopantetheinyl transferase superfamily LL3_RS02285 PF00842 Alanine racemase, C-terminal domain LL3_RS02285 PF01168 Alanine racemase, N-terminal domain LL3_RS02290 PF01402 Ribbon-helix-helix protein, copG family LL3_RS02295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LL3_RS02300 PF01740 STAS domain LL3_RS02300 PF08678 Rsbr N terminal LL3_RS02305 PF01740 STAS domain LL3_RS02310 PF13581 Histidine kinase-like ATPase domain LL3_RS02315 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LL3_RS02315 PF07228 Stage II sporulation protein E (SpoIIE) LL3_RS02320 PF01740 STAS domain LL3_RS02325 PF13581 Histidine kinase-like ATPase domain LL3_RS02330 PF04542 Sigma-70 region 2 LL3_RS02330 PF04539 Sigma-70 region 3 LL3_RS02330 PF04545 Sigma-70, region 4 LL3_RS02335 PF07228 Stage II sporulation protein E (SpoIIE) LL3_RS02340 PF16921 Tex protein YqgF-like domain LL3_RS02340 PF09371 Tex-like protein N-terminal domain LL3_RS02340 PF00575 S1 RNA binding domain LL3_RS02340 PF17674 HHH domain LL3_RS02345 PF10263 SprT-like family LL3_RS02385 PF07859 alpha/beta hydrolase fold LL3_RS02390 PF02566 OsmC-like protein LL3_RS02395 PF01047 MarR family LL3_RS02410 PF02082 Transcriptional regulator LL3_RS02415 PF02525 Flavodoxin-like fold LL3_RS02420 PF00313 'Cold-shock' DNA-binding domain LL3_RS02425 PF01177 Asp/Glu/Hydantoin racemase LL3_RS02440 PF00155 Aminotransferase class I and II LL3_RS02440 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02445 PF07690 Major Facilitator Superfamily LL3_RS02450 PF01734 Patatin-like phospholipase LL3_RS02460 PF01565 FAD binding domain LL3_RS02460 PF08031 Berberine and berberine like LL3_RS02470 PF16916 Dimerisation domain of Zinc Transporter LL3_RS02470 PF01545 Cation efflux family LL3_RS02480 PF07883 Cupin domain LL3_RS02485 PF00583 Acetyltransferase (GNAT) family LL3_RS02490 PF06445 GyrI-like small molecule binding domain LL3_RS02490 PF12833 Helix-turn-helix domain LL3_RS02500 PF04055 Radical SAM superfamily LL3_RS02515 PF00107 Zinc-binding dehydrogenase LL3_RS02515 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS02520 PF13411 MerR HTH family regulatory protein LL3_RS02530 PF00155 Aminotransferase class I and II LL3_RS02530 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02535 PF04299 Putative FMN-binding domain LL3_RS02540 PF07690 Major Facilitator Superfamily LL3_RS02545 PF00440 Bacterial regulatory proteins, tetR family LL3_RS02545 PF16859 Tetracyclin repressor-like, C-terminal domain LL3_RS02550 PF00892 EamA-like transporter family LL3_RS02555 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02555 PF00155 Aminotransferase class I and II LL3_RS02560 PF07875 Coat F domain LL3_RS02570 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS02570 PF13823 Alcohol dehydrogenase GroES-associated LL3_RS02570 PF00107 Zinc-binding dehydrogenase LL3_RS02575 PF07875 Coat F domain LL3_RS02585 PF03176 MMPL family LL3_RS02590 PF07722 Peptidase C26 LL3_RS02595 PF12848 ABC transporter LL3_RS02595 PF00005 ABC transporter LL3_RS02600 PF13302 Acetyltransferase (GNAT) domain LL3_RS02605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS02605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS02610 PF00465 Iron-containing alcohol dehydrogenase LL3_RS02615 PF07690 Major Facilitator Superfamily LL3_RS02620 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS02620 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS02630 PF01925 Sulfite exporter TauE/SafE LL3_RS02635 PF00583 Acetyltransferase (GNAT) family LL3_RS02640 PF06445 GyrI-like small molecule binding domain LL3_RS02640 PF13411 MerR HTH family regulatory protein LL3_RS02650 PF00293 NUDIX domain LL3_RS02655 PF00561 alpha/beta hydrolase fold LL3_RS02660 PF00180 Isocitrate/isopropylmalate dehydrogenase LL3_RS02665 PF07729 FCD domain LL3_RS02665 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02670 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LL3_RS02680 PF00144 Beta-lactamase LL3_RS02680 PF11954 Domain of unknown function (DUF3471) LL3_RS02685 PF07563 Protein of unknown function (DUF1541) LL3_RS02690 PF07690 Major Facilitator Superfamily LL3_RS02695 PF07702 UTRA domain LL3_RS02695 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02700 PF07729 FCD domain LL3_RS02700 PF00392 Bacterial regulatory proteins, gntR family LL3_RS02705 PF07690 Major Facilitator Superfamily LL3_RS02710 PF00893 Small Multidrug Resistance protein LL3_RS02715 PF00893 Small Multidrug Resistance protein LL3_RS02720 PF17934 Tetracyclin repressor-like, C-terminal domain LL3_RS02720 PF00440 Bacterial regulatory proteins, tetR family LL3_RS02725 PF13520 Amino acid permease LL3_RS02735 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LL3_RS02740 PF00107 Zinc-binding dehydrogenase LL3_RS02740 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS02745 PF00083 Sugar (and other) transporter LL3_RS02785 PF00586 AIR synthase related protein, N-terminal domain LL3_RS02785 PF02769 AIR synthase related protein, C-terminal domain LL3_RS02790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LL3_RS02795 PF00814 Glycoprotease family LL3_RS02800 PF00583 Acetyltransferase (GNAT) family LL3_RS02805 PF00814 Glycoprotease family LL3_RS02810 PF00005 ABC transporter LL3_RS02810 PF16326 ABC transporter C-terminal domain LL3_RS02810 PF12848 ABC transporter LL3_RS02815 PF01967 MoaC family LL3_RS02820 PF06971 Putative DNA-binding protein N-terminus LL3_RS02820 PF02629 CoA binding domain LL3_RS02825 PF02416 mttA/Hcf106 family LL3_RS02830 PF00902 Sec-independent protein translocase protein (TatC) LL3_RS02835 PF14146 Domain of unknown function (DUF4305) LL3_RS02840 PF02517 CPBP intramembrane metalloprotease LL3_RS02845 PF00166 Chaperonin 10 Kd subunit LL3_RS02850 PF00118 TCP-1/cpn60 chaperonin family LL3_RS02860 PF06114 IrrE N-terminal-like domain LL3_RS02875 PF01381 Helix-turn-helix LL3_RS02905 PF01381 Helix-turn-helix LL3_RS02910 PF17448 Uncharacterized YqaH-like LL3_RS02915 PF09466 Hypothetical protein Yqai LL3_RS02925 PF09588 YqaJ-like viral recombinase domain LL3_RS02930 PF03837 RecT family LL3_RS02935 PF07261 Replication initiation and membrane attachment LL3_RS02940 PF01695 IstB-like ATP binding protein LL3_RS02960 PF17356 Phage-like element PBSX protein XtrA LL3_RS02975 PF00145 C-5 cytosine-specific DNA methylase LL3_RS02990 PF09643 YopX protein LL3_RS03010 PF08281 Sigma-70, region 4 LL3_RS03030 PF10668 Phage terminase small subunit LL3_RS03035 PF17288 Terminase RNAseH like domain LL3_RS03035 PF04466 Phage terminase large subunit LL3_RS03135 PF05105 Bacteriophage holin family LL3_RS03140 PF01471 Putative peptidoglycan binding domain LL3_RS03140 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS03165 PF01471 Putative peptidoglycan binding domain LL3_RS03165 PF08924 Domain of unknown function (DUF1906) LL3_RS03180 PF13176 Tetratricopeptide repeat LL3_RS03180 PF00931 NB-ARC domain LL3_RS03185 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS03185 PF00107 Zinc-binding dehydrogenase LL3_RS03195 PF00294 pfkB family carbohydrate kinase LL3_RS03200 PF14154 Domain of unknown function (DUF4306) LL3_RS03205 PF04012 PspA/IM30 family LL3_RS03210 PF08271 TFIIB zinc-binding LL3_RS03215 PF04536 TPM domain LL3_RS03220 PF13421 SPFH domain-Band 7 family LL3_RS03225 PF01757 Acyltransferase family LL3_RS03230 PF13739 Deacetylase PdaC LL3_RS03230 PF11738 Protein of unknown function (DUF3298) LL3_RS03235 PF08281 Sigma-70, region 4 LL3_RS03235 PF04542 Sigma-70 region 2 LL3_RS03240 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS03240 PF00107 Zinc-binding dehydrogenase LL3_RS03245 PF03330 Lytic transglycolase LL3_RS03250 PF07676 WD40-like Beta Propeller Repeat LL3_RS03260 PF14169 Cold-inducible protein YdjO LL3_RS03265 PF07731 Multicopper oxidase LL3_RS03265 PF07732 Multicopper oxidase LL3_RS03265 PF00394 Multicopper oxidase LL3_RS03270 PF00324 Amino acid permease LL3_RS03280 PF01545 Cation efflux family LL3_RS03280 PF16916 Dimerisation domain of Zinc Transporter LL3_RS03285 PF07726 ATPase family associated with various cellular activities (AAA) LL3_RS03285 PF17863 AAA lid domain LL3_RS03290 PF01882 Protein of unknown function DUF58 LL3_RS03295 PF13559 Domain of unknown function (DUF4129) LL3_RS03295 PF11992 Domain of unknown function (DUF3488) LL3_RS03295 PF01841 Transglutaminase-like superfamily LL3_RS03300 PF02540 NAD synthase LL3_RS03300 PF00958 GMP synthase C terminal domain LL3_RS03300 PF00117 Glutamine amidotransferase class-I LL3_RS03305 PF04545 Sigma-70, region 4 LL3_RS03305 PF04542 Sigma-70 region 2 LL3_RS03315 PF00860 Permease family LL3_RS03325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS03330 PF14044 NETI protein LL3_RS03335 PF00731 AIR carboxylase LL3_RS03340 PF02222 ATP-grasp domain LL3_RS03340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LL3_RS03345 PF10397 Adenylosuccinate lyase C-terminus LL3_RS03345 PF00206 Lyase LL3_RS03350 PF01259 SAICAR synthetase LL3_RS03355 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LL3_RS03365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LL3_RS03365 PF00586 AIR synthase related protein, N-terminal domain LL3_RS03365 PF02769 AIR synthase related protein, C-terminal domain LL3_RS03370 PF00156 Phosphoribosyl transferase domain LL3_RS03375 PF00586 AIR synthase related protein, N-terminal domain LL3_RS03375 PF02769 AIR synthase related protein, C-terminal domain LL3_RS03380 PF00551 Formyl transferase LL3_RS03385 PF01808 AICARFT/IMPCHase bienzyme LL3_RS03385 PF02142 MGS-like domain LL3_RS03390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LL3_RS03390 PF02843 Phosphoribosylglycinamide synthetase, C domain LL3_RS03390 PF02844 Phosphoribosylglycinamide synthetase, N domain LL3_RS03395 PF01037 Lrp/AsnC ligand binding domain LL3_RS03400 PF13520 Amino acid permease LL3_RS03405 PF11127 Protein of unknown function (DUF2892) LL3_RS03410 PF01979 Amidohydrolase family LL3_RS03410 PF13382 Adenine deaminase C-terminal domain LL3_RS03415 PF17479 Protein of unknown function (DUF3048) C-terminal domain LL3_RS03415 PF11258 Protein of unknown function (DUF3048) N-terminal domain LL3_RS03420 PF01371 Trp repressor protein LL3_RS03425 PF01645 Conserved region in glutamate synthase LL3_RS03435 PF01884 PcrB family LL3_RS03440 PF13361 UvrD-like helicase C-terminal domain LL3_RS03440 PF00580 UvrD/REP helicase N-terminal domain LL3_RS03445 PF03120 NAD-dependent DNA ligase OB-fold domain LL3_RS03445 PF12826 Helix-hairpin-helix motif LL3_RS03445 PF01653 NAD-dependent DNA ligase adenylation domain LL3_RS03445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LL3_RS03445 PF00533 BRCA1 C Terminus (BRCT) domain LL3_RS03450 PF07537 CamS sex pheromone cAM373 precursor LL3_RS03455 PF01636 Phosphotransferase enzyme family LL3_RS03460 PF02308 MgtC family LL3_RS03465 PF00474 Sodium:solute symporter family LL3_RS03470 PF02686 Glu-tRNAGln amidotransferase C subunit LL3_RS03475 PF01425 Amidase LL3_RS03480 PF02934 GatB/GatE catalytic domain LL3_RS03480 PF02637 GatB domain LL3_RS03485 PF00440 Bacterial regulatory proteins, tetR family LL3_RS03490 PF00873 AcrB/AcrD/AcrF family LL3_RS03495 PF00781 Diacylglycerol kinase catalytic domain LL3_RS03500 PF01938 TRAM domain LL3_RS03500 PF05958 tRNA (Uracil-5-)-methyltransferase LL3_RS03510 PF00005 ABC transporter LL3_RS03525 PF04634 Protein of unknown function, DUF600 LL3_RS03530 PF04634 Protein of unknown function, DUF600 LL3_RS03535 PF04740 LXG domain of WXG superfamily LL3_RS03540 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LL3_RS03540 PF04740 LXG domain of WXG superfamily LL3_RS03545 PF01709 Transcriptional regulator LL3_RS03555 PF04439 Streptomycin adenylyltransferase LL3_RS03560 PF11007 Spore coat associated protein JA (CotJA) LL3_RS03565 PF12652 CotJB protein LL3_RS03570 PF05067 Manganese containing catalase LL3_RS03575 PF00583 Acetyltransferase (GNAT) family LL3_RS03585 PF04239 Protein of unknown function (DUF421) LL3_RS03590 PF03992 Antibiotic biosynthesis monooxygenase LL3_RS03595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS03605 PF01687 Riboflavin kinase LL3_RS03610 PF01027 Inhibitor of apoptosis-promoting Bax1 LL3_RS03615 PF01047 MarR family LL3_RS03620 PF01494 FAD binding domain LL3_RS03630 PF00067 Cytochrome P450 LL3_RS03630 PF00175 Oxidoreductase NAD-binding domain LL3_RS03630 PF00258 Flavodoxin LL3_RS03630 PF00667 FAD binding domain LL3_RS03640 PF00884 Sulfatase LL3_RS03645 PF00483 Nucleotidyl transferase LL3_RS03650 PF16363 GDP-mannose 4,6 dehydratase LL3_RS03655 PF03407 Nucleotide-diphospho-sugar transferase LL3_RS03660 PF00535 Glycosyl transferase family 2 LL3_RS03665 PF03407 Nucleotide-diphospho-sugar transferase LL3_RS03670 PF07690 Major Facilitator Superfamily LL3_RS03675 PF13520 Amino acid permease LL3_RS03680 PF00171 Aldehyde dehydrogenase family LL3_RS03685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS03695 PF00535 Glycosyl transferase family 2 LL3_RS03695 PF13181 Tetratricopeptide repeat LL3_RS03700 PF12848 ABC transporter LL3_RS03700 PF16326 ABC transporter C-terminal domain LL3_RS03700 PF00005 ABC transporter LL3_RS03705 PF13411 MerR HTH family regulatory protein LL3_RS03710 PF07690 Major Facilitator Superfamily LL3_RS03715 PF00005 ABC transporter LL3_RS03715 PF12848 ABC transporter LL3_RS03720 PF00270 DEAD/DEAH box helicase LL3_RS03720 PF00271 Helicase conserved C-terminal domain LL3_RS03725 PF00107 Zinc-binding dehydrogenase LL3_RS03725 PF16884 N-terminal domain of oxidoreductase LL3_RS03730 PF11486 Protein of unknown function (DUF3212) LL3_RS03735 PF11181 Heat induced stress protein YflT LL3_RS03740 PF00544 Pectate lyase LL3_RS03745 PF00939 Sodium:sulfate symporter transmembrane region LL3_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS03780 PF06580 Histidine kinase LL3_RS03785 PF00072 Response regulator receiver domain LL3_RS03785 PF04397 LytTr DNA-binding domain LL3_RS03795 PF04203 Sortase domain LL3_RS03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS03800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL3_RS03805 PF00072 Response regulator receiver domain LL3_RS03805 PF08279 HTH domain LL3_RS03805 PF12431 Transcriptional regulator LL3_RS03810 PF03401 Tripartite tricarboxylate transporter family receptor LL3_RS03815 PF03600 Citrate transporter LL3_RS03820 PF00753 Metallo-beta-lactamase superfamily LL3_RS03825 PF02898 Nitric oxide synthase, oxygenase domain LL3_RS03830 PF00708 Acylphosphatase LL3_RS03835 PF03473 MOSC domain LL3_RS03835 PF03475 3-alpha domain LL3_RS03840 PF11588 Protein of unknown function (DUF3243) LL3_RS03845 PF00557 Metallopeptidase family M24 LL3_RS03850 PF02378 Phosphotransferase system, EIIC LL3_RS03850 PF00367 phosphotransferase system, EIIB LL3_RS03855 PF10787 Uncharacterised protein from bacillus cereus group LL3_RS03860 PF00884 Sulfatase LL3_RS03865 PF09350 Domain of unknown function (DUF1992) LL3_RS03870 PF00011 Hsp20/alpha crystallin family LL3_RS03875 PF10676 Spore germination protein gerPA/gerPF LL3_RS03880 PF10676 Spore germination protein gerPA/gerPF LL3_RS03885 PF00367 phosphotransferase system, EIIB LL3_RS03885 PF02378 Phosphotransferase system, EIIC LL3_RS03890 PF00128 Alpha amylase, catalytic domain LL3_RS03890 PF16657 Maltogenic Amylase, C-terminal domain LL3_RS03895 PF00392 Bacterial regulatory proteins, gntR family LL3_RS03895 PF07702 UTRA domain LL3_RS03900 PF00881 Nitroreductase family LL3_RS03915 PF02872 5'-nucleotidase, C-terminal domain LL3_RS03915 PF00149 Calcineurin-like phosphoesterase LL3_RS03920 PF01965 DJ-1/PfpI family LL3_RS03925 PF00356 Bacterial regulatory proteins, lacI family LL3_RS03930 PF08501 Shikimate dehydrogenase substrate binding domain LL3_RS03930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LL3_RS03935 PF01487 Type I 3-dehydroquinase LL3_RS03940 PF07690 Major Facilitator Superfamily LL3_RS03945 PF06569 Protein of unknown function (DUF1128) LL3_RS03950 PF01451 Low molecular weight phosphotyrosine protein phosphatase LL3_RS03960 PF03631 Virulence factor BrkB LL3_RS03965 PF07690 Major Facilitator Superfamily LL3_RS03970 PF01699 Sodium/calcium exchanger protein LL3_RS03975 PF14167 YfkD-like protein LL3_RS03980 PF00924 Mechanosensitive ion channel LL3_RS03985 PF08756 YfkB-like domain LL3_RS03985 PF04055 Radical SAM superfamily LL3_RS03995 PF01522 Polysaccharide deacetylase LL3_RS04000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LL3_RS04000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL3_RS04010 PF01544 CorA-like Mg2+ transporter protein LL3_RS04015 PF00730 HhH-GPD superfamily base excision DNA repair protein LL3_RS04020 PF05958 tRNA (Uracil-5-)-methyltransferase LL3_RS04020 PF01938 TRAM domain LL3_RS04030 PF00082 Subtilase family LL3_RS04035 PF00005 ABC transporter LL3_RS04035 PF00664 ABC transporter transmembrane region LL3_RS04040 PF00069 Protein kinase domain LL3_RS04045 PF14118 YfzA-like protein LL3_RS04050 PF01207 Dihydrouridine synthase (Dus) LL3_RS04060 PF00676 Dehydrogenase E1 component LL3_RS04065 PF02779 Transketolase, pyrimidine binding domain LL3_RS04065 PF02780 Transketolase, C-terminal domain LL3_RS04070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL3_RS04070 PF02817 e3 binding domain LL3_RS04070 PF00364 Biotin-requiring enzyme LL3_RS04075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL3_RS04075 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS04080 PF02954 Bacterial regulatory protein, Fis family LL3_RS04080 PF00158 Sigma-54 interaction domain LL3_RS04080 PF01590 GAF domain LL3_RS04085 PF08141 Small acid-soluble spore protein H family LL3_RS04090 PF11975 Family 4 glycosyl hydrolase C-terminal domain LL3_RS04090 PF02056 Family 4 glycosyl hydrolase LL3_RS04095 PF01380 SIS domain LL3_RS04095 PF01418 Helix-turn-helix domain, rpiR family LL3_RS04100 PF00367 phosphotransferase system, EIIB LL3_RS04100 PF02378 Phosphotransferase system, EIIC LL3_RS04105 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LL3_RS04105 PF12708 Pectate lyase superfamily protein LL3_RS04110 PF00005 ABC transporter LL3_RS04110 PF00664 ABC transporter transmembrane region LL3_RS04115 PF00005 ABC transporter LL3_RS04115 PF00664 ABC transporter transmembrane region LL3_RS04120 PF07681 DoxX LL3_RS04125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS04135 PF10400 Virulence activator alpha C-term LL3_RS04135 PF03551 Transcriptional regulator PadR-like family LL3_RS04140 PF02525 Flavodoxin-like fold LL3_RS04145 PF01757 Acyltransferase family LL3_RS04150 PF01337 Barstar (barnase inhibitor) LL3_RS04155 PF12867 DinB superfamily LL3_RS04160 PF07690 Major Facilitator Superfamily LL3_RS04165 PF01047 MarR family LL3_RS04170 PF09924 Uncharacterised conserved protein (DUF2156) LL3_RS04170 PF03706 Lysylphosphatidylglycerol synthase TM region LL3_RS04175 PF02567 Phenazine biosynthesis-like protein LL3_RS04180 PF00881 Nitroreductase family LL3_RS04185 PF14151 YfhD-like protein LL3_RS04190 PF01370 NAD dependent epimerase/dehydratase family LL3_RS04190 PF08338 Domain of unknown function (DUF1731) LL3_RS04195 PF02631 RecX family LL3_RS04200 PF08838 Protein of unknown function (DUF1811) LL3_RS04210 PF10794 Protein of unknown function (DUF2606) LL3_RS04215 PF00089 Trypsin LL3_RS04220 PF08176 Small acid-soluble spore protein K family LL3_RS04225 PF14043 WVELL protein LL3_RS04230 PF08239 Bacterial SH3 domain LL3_RS04235 PF13630 SdpI/YhfL protein family LL3_RS04240 PF00561 alpha/beta hydrolase fold LL3_RS04245 PF00535 Glycosyl transferase family 2 LL3_RS04250 PF09586 Bacterial membrane protein YfhO LL3_RS04255 PF04307 LexA-binding, inner membrane-associated putative hydrolase LL3_RS04265 PF14659 Phage integrase, N-terminal SAM-like domain LL3_RS04265 PF00589 Phage integrase family LL3_RS04300 PF09669 Phage regulatory protein Rha (Phage_pRha) LL3_RS04300 PF03374 Phage antirepressor protein KilAC domain LL3_RS04325 PF00772 DnaB-like helicase N terminal domain LL3_RS04325 PF03796 DnaB-like helicase C terminal domain LL3_RS04345 PF09397 Ftsk gamma domain LL3_RS04345 PF17854 FtsK alpha domain LL3_RS04345 PF01580 FtsK/SpoIIIE family LL3_RS04380 PF00574 Clp protease LL3_RS04460 PF10960 BhlA holin family LL3_RS04465 PF04688 SPP1 phage holin LL3_RS04470 PF01471 Putative peptidoglycan binding domain LL3_RS04470 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS04490 PF00730 HhH-GPD superfamily base excision DNA repair protein LL3_RS04490 PF14815 NUDIX domain LL3_RS04505 PF04259 Small, acid-soluble spore protein, gamma-type LL3_RS04510 PF14182 YgaB-like protein LL3_RS04515 PF04167 Protein of unknown function (DUF402) LL3_RS04520 PF00005 ABC transporter LL3_RS04520 PF00664 ABC transporter transmembrane region LL3_RS04525 PF06081 Aromatic acid exporter family member 1 LL3_RS04530 PF00202 Aminotransferase class-III LL3_RS04535 PF00578 AhpC/TSA family LL3_RS04540 PF01475 Ferric uptake regulator family LL3_RS04545 PF11023 Zinc-ribbon containing domain LL3_RS04550 PF14540 Nucleotidyltransferase-like LL3_RS04550 PF18576 Helix-turn-helix domain LL3_RS04650 PF03553 Na+/H+ antiporter family LL3_RS04655 PF03575 Peptidase family S51 LL3_RS04660 PF13667 ThiC-associated domain LL3_RS04660 PF01964 Radical SAM ThiC family LL3_RS04665 PF13040 Fur-regulated basic protein B LL3_RS04670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL3_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS04680 PF12911 N-terminal TM domain of oligopeptide transport permease C LL3_RS04685 PF00005 ABC transporter LL3_RS04685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS04690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS04690 PF00005 ABC transporter LL3_RS04695 PF06628 Catalase-related immune-responsive LL3_RS04695 PF00199 Catalase LL3_RS04705 PF00005 ABC transporter LL3_RS04710 PF09084 NMT1/THI5 like LL3_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS04720 PF00296 Luciferase-like monooxygenase LL3_RS04730 PF00253 Ribosomal protein S14p/S29e LL3_RS04740 PF01381 Helix-turn-helix LL3_RS04755 PF08331 Domain of unknown function (DUF1730) LL3_RS04760 PF12671 Putative amidase domain LL3_RS04765 PF00588 SpoU rRNA Methylase family LL3_RS04770 PF13171 Protein of unknown function (DUF4004) LL3_RS04775 PF04519 Polymer-forming cytoskeletal LL3_RS04785 PF08298 PrkA AAA domain LL3_RS04785 PF06798 PrkA serine protein kinase C-terminal domain LL3_RS04790 PF04285 Protein of unknown function (DUF444) LL3_RS04795 PF01047 MarR family LL3_RS04805 PF07690 Major Facilitator Superfamily LL3_RS04810 PF03358 NADPH-dependent FMN reductase LL3_RS04825 PF00392 Bacterial regulatory proteins, gntR family LL3_RS04830 PF00005 ABC transporter LL3_RS04835 PF00005 ABC transporter LL3_RS04840 PF12679 ABC-2 family transporter protein LL3_RS04845 PF00313 'Cold-shock' DNA-binding domain LL3_RS04850 PF03180 NLPA lipoprotein LL3_RS04855 PF07694 5TMR of 5TMR-LYT LL3_RS04855 PF00990 Diguanylate cyclase, GGDEF domain LL3_RS04860 PF00375 Sodium:dicarboxylate symporter family LL3_RS04865 PF01546 Peptidase family M20/M25/M40 LL3_RS04875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LL3_RS04885 PF07875 Coat F domain LL3_RS04890 PF00565 Staphylococcal nuclease homologue LL3_RS04890 PF02872 5'-nucleotidase, C-terminal domain LL3_RS04890 PF00149 Calcineurin-like phosphoesterase LL3_RS04890 PF00746 LPXTG cell wall anchor motif LL3_RS04895 PF04203 Sortase domain LL3_RS04900 PF01479 S4 domain LL3_RS04900 PF00849 RNA pseudouridylate synthase LL3_RS04905 PF17326 Family of unknown function (DUF5365) LL3_RS04910 PF00571 CBS domain LL3_RS04915 PF13419 Haloacid dehalogenase-like hydrolase LL3_RS04920 PF00583 Acetyltransferase (GNAT) family LL3_RS04920 PF00795 Carbon-nitrogen hydrolase LL3_RS04925 PF00202 Aminotransferase class-III LL3_RS04930 PF04309 Glycerol-3-phosphate responsive antiterminator LL3_RS04935 PF00230 Major intrinsic protein LL3_RS04940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL3_RS04940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL3_RS04945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LL3_RS04945 PF01266 FAD dependent oxidoreductase LL3_RS04950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LL3_RS04950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LL3_RS04950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LL3_RS04950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LL3_RS04955 PF13185 GAF domain LL3_RS04955 PF07730 Histidine kinase LL3_RS04960 PF00072 Response regulator receiver domain LL3_RS04960 PF00196 Bacterial regulatory proteins, luxR family LL3_RS04965 PF03358 NADPH-dependent FMN reductase LL3_RS04970 PF14148 YhdB-like protein LL3_RS04975 PF13028 Protein of unknown function (DUF3889) LL3_RS04980 PF00877 NlpC/P60 family LL3_RS04980 PF01476 LysM domain LL3_RS04985 PF02082 Transcriptional regulator LL3_RS04990 PF05552 Conserved TM helix LL3_RS04995 PF04293 SpoVR like protein LL3_RS05000 PF00245 Alkaline phosphatase LL3_RS05005 PF01476 LysM domain LL3_RS05005 PF00877 NlpC/P60 family LL3_RS05010 PF03466 LysR substrate binding domain LL3_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS05015 PF00285 Citrate synthase, C-terminal domain LL3_RS05025 PF13520 Amino acid permease LL3_RS05030 PF00209 Sodium:neurotransmitter symporter family LL3_RS05035 PF17453 Sigma-M inhibitor LL3_RS05040 PF13800 Sigma factor regulator N-terminal LL3_RS05040 PF13791 Sigma factor regulator C-terminal LL3_RS05045 PF08281 Sigma-70, region 4 LL3_RS05045 PF04542 Sigma-70 region 2 LL3_RS05050 PF01553 Acyltransferase LL3_RS05055 PF01595 Cyclin M transmembrane N-terminal domain LL3_RS05055 PF00571 CBS domain LL3_RS05055 PF03471 Transporter associated domain LL3_RS05060 PF13411 MerR HTH family regulatory protein LL3_RS05065 PF00155 Aminotransferase class I and II LL3_RS05070 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS05070 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS05075 PF03471 Transporter associated domain LL3_RS05075 PF00571 CBS domain LL3_RS05075 PF01595 Cyclin M transmembrane N-terminal domain LL3_RS05080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LL3_RS05085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LL3_RS05090 PF03009 Glycerophosphoryl diester phosphodiesterase family LL3_RS05095 PF00924 Mechanosensitive ion channel LL3_RS05100 PF02146 Sir2 family LL3_RS05105 PF01522 Polysaccharide deacetylase LL3_RS05110 PF01063 Amino-transferase class IV LL3_RS05115 PF13977 BetI-type transcriptional repressor, C-terminal LL3_RS05115 PF00440 Bacterial regulatory proteins, tetR family LL3_RS05125 PF00582 Universal stress protein family LL3_RS05130 PF00664 ABC transporter transmembrane region LL3_RS05130 PF00005 ABC transporter LL3_RS05135 PF00005 ABC transporter LL3_RS05135 PF00664 ABC transporter transmembrane region LL3_RS05140 PF13460 NAD(P)H-binding LL3_RS05145 PF00269 Small, acid-soluble spore proteins, alpha/beta type LL3_RS05155 PF17277 Family of unknown function (DUF5342) LL3_RS05160 PF14398 YheC/D like ATP-grasp LL3_RS05165 PF14398 YheC/D like ATP-grasp LL3_RS05170 PF04286 Protein of unknown function (DUF445) LL3_RS05175 PF06133 Control of competence regulator ComK, YlbF/YmcA LL3_RS05185 PF04055 Radical SAM superfamily LL3_RS05190 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LL3_RS05195 PF00999 Sodium/hydrogen exchanger family LL3_RS05200 PF02080 TrkA-C domain LL3_RS05210 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS05215 PF14120 YhzD-like protein LL3_RS05220 PF13732 Domain of unknown function (DUF4162) LL3_RS05220 PF00005 ABC transporter LL3_RS05230 PF00149 Calcineurin-like phosphoesterase LL3_RS05235 PF13514 AAA domain LL3_RS05240 PF01966 HD domain LL3_RS05245 PF14147 Sporulation protein YhaL LL3_RS05260 PF09680 Family of unknown function LL3_RS05270 PF11667 Putative zincin peptidase LL3_RS05275 PF08963 Protein of unknown function (DUF1878) LL3_RS05280 PF01047 MarR family LL3_RS05285 PF12732 YtxH-like protein LL3_RS05295 PF17099 Tryptophan transporter TrpP LL3_RS05300 PF00266 Aminotransferase class-V LL3_RS05305 PF01230 HIT domain LL3_RS05310 PF00005 ABC transporter LL3_RS05315 PF05975 Bacterial ABC transporter protein EcsB LL3_RS05320 PF12787 EcsC protein family LL3_RS05325 PF07687 Peptidase dimerisation domain LL3_RS05325 PF01546 Peptidase family M20/M25/M40 LL3_RS05335 PF03992 Antibiotic biosynthesis monooxygenase LL3_RS05340 PF00905 Penicillin binding protein transpeptidase domain LL3_RS05340 PF00912 Transglycosylase LL3_RS05345 PF01208 Uroporphyrinogen decarboxylase (URO-D) LL3_RS05350 PF00762 Ferrochelatase LL3_RS05355 PF01593 Flavin containing amine oxidoreductase LL3_RS05360 PF17932 Tetracyclin repressor-like, C-terminal domain LL3_RS05360 PF00440 Bacterial regulatory proteins, tetR family LL3_RS05370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LL3_RS05370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LL3_RS05380 PF05343 M42 glutamyl aminopeptidase LL3_RS05385 PF00375 Sodium:dicarboxylate symporter family LL3_RS05390 PF12706 Beta-lactamase superfamily domain LL3_RS05395 PF03099 Biotin/lipoate A/B protein ligase family LL3_RS05395 PF10437 Bacterial lipoate protein ligase C-terminus LL3_RS05400 PF13460 NAD(P)H-binding LL3_RS05405 PF00501 AMP-binding enzyme LL3_RS05405 PF13193 AMP-binding enzyme C-terminal domain LL3_RS05415 PF16491 CAAX prenyl protease N-terminal, five membrane helices LL3_RS05415 PF01435 Peptidase family M48 LL3_RS05420 PF00082 Subtilase family LL3_RS05420 PF05922 Peptidase inhibitor I9 LL3_RS05425 PF01497 Periplasmic binding protein LL3_RS05430 PF00300 Histidine phosphatase superfamily (branch 1) LL3_RS05435 PF00108 Thiolase, N-terminal domain LL3_RS05435 PF02803 Thiolase, C-terminal domain LL3_RS05440 PF00501 AMP-binding enzyme LL3_RS05440 PF13193 AMP-binding enzyme C-terminal domain LL3_RS05445 PF02632 BioY family LL3_RS05450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS05455 PF01266 FAD dependent oxidoreductase LL3_RS05455 PF00355 Rieske [2Fe-2S] domain LL3_RS05465 PF08858 IDEAL domain LL3_RS05470 PF06338 ComK protein LL3_RS05475 PF08818 Domain of unknown function (DU1801) LL3_RS05485 PF15493 Domain of unknown function, YrpD LL3_RS05490 PF05901 Excalibur calcium-binding domain LL3_RS05495 PF01906 Putative heavy-metal-binding LL3_RS05500 PF00474 Sodium:solute symporter family LL3_RS05505 PF11755 Protein of unknown function (DUF3311) LL3_RS05515 PF09335 SNARE associated Golgi protein LL3_RS05520 PF10502 Signal peptidase, peptidase S26 LL3_RS05525 PF01494 FAD binding domain LL3_RS05530 PF01047 MarR family LL3_RS05535 PF05145 Transition state regulatory protein AbrB LL3_RS05540 PF07690 Major Facilitator Superfamily LL3_RS05545 PF08361 MAATS-type transcriptional repressor, C-terminal region LL3_RS05545 PF00440 Bacterial regulatory proteins, tetR family LL3_RS05550 PF02915 Rubrerythrin LL3_RS05555 PF04239 Protein of unknown function (DUF421) LL3_RS05560 PF13361 UvrD-like helicase C-terminal domain LL3_RS05560 PF12705 PD-(D/E)XK nuclease superfamily LL3_RS05565 PF13361 UvrD-like helicase C-terminal domain LL3_RS05565 PF00580 UvrD/REP helicase N-terminal domain LL3_RS05565 PF12705 PD-(D/E)XK nuclease superfamily LL3_RS05570 PF00149 Calcineurin-like phosphoesterase LL3_RS05570 PF12320 Type 5 capsule protein repressor C-terminal domain LL3_RS05575 PF13476 AAA domain LL3_RS05585 PF10676 Spore germination protein gerPA/gerPF LL3_RS05590 PF10970 Spore germination protein GerPE LL3_RS05600 PF10737 Spore germination protein GerPC LL3_RS05605 PF10803 Spore germination GerPB LL3_RS05610 PF10676 Spore germination protein gerPA/gerPF LL3_RS05615 PF09388 Spo0E like sporulation regulatory protein LL3_RS05620 PF01557 Fumarylacetoacetate (FAA) hydrolase family LL3_RS05625 PF07457 Protein of unknown function (DUF1516) LL3_RS05630 PF17936 Bacterial Ig domain LL3_RS05630 PF00082 Subtilase family LL3_RS05635 PF10949 Protein of unknown function (DUF2777) LL3_RS05640 PF13537 Glutamine amidotransferase domain LL3_RS05640 PF00733 Asparagine synthase LL3_RS05650 PF01554 MatE LL3_RS05655 PF02311 AraC-like ligand binding domain LL3_RS05655 PF12833 Helix-turn-helix domain LL3_RS05660 PF00356 Bacterial regulatory proteins, lacI family LL3_RS05665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL3_RS05665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL3_RS05670 PF05163 DinB family LL3_RS05675 PF01810 LysE type translocator LL3_RS05680 PF00392 Bacterial regulatory proteins, gntR family LL3_RS05680 PF00155 Aminotransferase class I and II LL3_RS05685 PF13599 Pentapeptide repeats (9 copies) LL3_RS05690 PF13673 Acetyltransferase (GNAT) domain LL3_RS05695 PF02219 Methylenetetrahydrofolate reductase LL3_RS05695 PF02574 Homocysteine S-methyltransferase LL3_RS05705 PF17783 CvfB-like winged helix domain LL3_RS05705 PF13509 S1 domain LL3_RS05710 PF02608 ABC transporter substrate-binding protein PnrA-like LL3_RS05715 PF00672 HAMP domain LL3_RS05715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS05715 PF12729 Four helix bundle sensory module for signal transduction LL3_RS05720 PF00067 Cytochrome P450 LL3_RS05725 PF02645 Uncharacterised protein, DegV family COG1307 LL3_RS05730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS05730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS05735 PF12690 Intracellular proteinase inhibitor LL3_RS05740 PF12758 Protein of unknown function (DUF3813) LL3_RS05750 PF00326 Prolyl oligopeptidase family LL3_RS05755 PF01883 Iron-sulfur cluster assembly protein LL3_RS05760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS05765 PF01565 FAD binding domain LL3_RS05770 PF07690 Major Facilitator Superfamily LL3_RS05775 PF02774 Semialdehyde dehydrogenase, dimerisation domain LL3_RS05775 PF01118 Semialdehyde dehydrogenase, NAD binding domain LL3_RS05780 PF01960 ArgJ family LL3_RS05785 PF00696 Amino acid kinase family LL3_RS05790 PF00202 Aminotransferase class-III LL3_RS05795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LL3_RS05795 PF00117 Glutamine amidotransferase class-I LL3_RS05800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LL3_RS05800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL3_RS05805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LL3_RS05805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LL3_RS05810 PF14168 YjzC-like protein LL3_RS05815 PF11151 Protein of unknown function (DUF2929) LL3_RS05830 PF02608 ABC transporter substrate-binding protein PnrA-like LL3_RS05835 PF10815 ComZ LL3_RS05845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LL3_RS05845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LL3_RS05850 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS05850 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS05855 PF10026 Predicted Zn-dependent protease (DUF2268) LL3_RS05860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS05860 PF00005 ABC transporter LL3_RS05865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS05865 PF00005 ABC transporter LL3_RS05870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL3_RS05875 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS05880 PF12911 N-terminal TM domain of oligopeptide transport permease C LL3_RS05885 PF12227 Protein of unknown function (DUF3603) LL3_RS05890 PF00579 tRNA synthetases class I (W and Y) LL3_RS05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL3_RS05900 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS05905 PF12911 N-terminal TM domain of oligopeptide transport permease C LL3_RS05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS05910 PF00005 ABC transporter LL3_RS05915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS05915 PF00005 ABC transporter LL3_RS05925 PF13508 Acetyltransferase (GNAT) domain LL3_RS05930 PF03960 ArsC family LL3_RS05935 PF03741 Integral membrane protein TerC family LL3_RS05940 PF05389 Negative regulator of genetic competence (MecA) LL3_RS05945 PF06054 Competence protein CoiA-like family LL3_RS05950 PF01432 Peptidase family M3 LL3_RS05950 PF08439 Oligopeptidase F LL3_RS05965 PF01152 Bacterial-like globin LL3_RS05970 PF01464 Transglycosylase SLT domain LL3_RS05975 PF01928 CYTH domain LL3_RS05985 PF04607 Region found in RelA / SpoT proteins LL3_RS05990 PF01513 ATP-NAD kinase LL3_RS05995 PF00849 RNA pseudouridylate synthase LL3_RS06000 PF00149 Calcineurin-like phosphoesterase LL3_RS06005 PF00999 Sodium/hydrogen exchanger family LL3_RS06005 PF02254 TrkA-N domain LL3_RS06005 PF02080 TrkA-C domain LL3_RS06010 PF03070 TENA/THI-4/PQQC family LL3_RS06015 PF02581 Thiamine monophosphate synthase LL3_RS06020 PF01266 FAD dependent oxidoreductase LL3_RS06025 PF02597 ThiS family LL3_RS06030 PF05690 Thiazole biosynthesis protein ThiG LL3_RS06035 PF00899 ThiF family LL3_RS06040 PF08543 Phosphomethylpyrimidine kinase LL3_RS06050 PF14153 Spore coat protein CotO LL3_RS06055 PF10612 Spore coat protein Z LL3_RS06060 PF10612 Spore coat protein Z LL3_RS06065 PF07552 Spore Coat Protein X and V domain LL3_RS06075 PF07552 Spore Coat Protein X and V domain LL3_RS06080 PF07098 Protein of unknown function (DUF1360) LL3_RS06095 PF14069 Stage VI sporulation protein F LL3_RS06100 PF00580 UvrD/REP helicase N-terminal domain LL3_RS06100 PF13361 UvrD-like helicase C-terminal domain LL3_RS06110 PF00753 Metallo-beta-lactamase superfamily LL3_RS06120 PF00005 ABC transporter LL3_RS06130 PF13673 Acetyltransferase (GNAT) domain LL3_RS06140 PF00756 Putative esterase LL3_RS06145 PF01053 Cys/Met metabolism PLP-dependent enzyme LL3_RS06150 PF01053 Cys/Met metabolism PLP-dependent enzyme LL3_RS06175 PF09346 SMI1 / KNR4 family (SUKH-1) LL3_RS06200 PF07693 KAP family P-loop domain LL3_RS06205 PF07693 KAP family P-loop domain LL3_RS06215 PF08863 YolD-like protein LL3_RS06220 PF11798 IMS family HHH motif LL3_RS06220 PF11799 impB/mucB/samB family C-terminal domain LL3_RS06220 PF00817 impB/mucB/samB family LL3_RS06235 PF14037 YoqO-like protein LL3_RS06255 PF18593 CdiI immunity protein LL3_RS06270 PF03992 Antibiotic biosynthesis monooxygenase LL3_RS06275 PF07690 Major Facilitator Superfamily LL3_RS06280 PF01047 MarR family LL3_RS06285 PF07745 Glycosyl hydrolase family 53 LL3_RS06290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS06290 PF02378 Phosphotransferase system, EIIC LL3_RS06295 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LL3_RS06300 PF00232 Glycosyl hydrolase family 1 LL3_RS06305 PF00455 DeoR C terminal sensor domain LL3_RS06305 PF08220 DeoR-like helix-turn-helix domain LL3_RS06325 PF02308 MgtC family LL3_RS06330 PF10990 Protein of unknown function (DUF2809) LL3_RS06335 PF14172 Domain of unknown function (DUF4309) LL3_RS06340 PF00384 Molybdopterin oxidoreductase LL3_RS06340 PF12838 4Fe-4S dicluster domain LL3_RS06340 PF01568 Molydopterin dinucleotide binding domain LL3_RS06340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LL3_RS06340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL3_RS06345 PF07849 Protein of unknown function (DUF1641) LL3_RS06350 PF00067 Cytochrome P450 LL3_RS06355 PF04101 Glycosyltransferase family 28 C-terminal domain LL3_RS06365 PF02602 Uroporphyrinogen-III synthase HemD LL3_RS06370 PF03649 Uncharacterised protein family (UPF0014) LL3_RS06375 PF00005 ABC transporter LL3_RS06380 PF13536 Putative multidrug resistance efflux transporter LL3_RS06390 PF07849 Protein of unknown function (DUF1641) LL3_RS06395 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS06400 PF02614 Glucuronate isomerase LL3_RS06405 PF00356 Bacterial regulatory proteins, lacI family LL3_RS06410 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LL3_RS06410 PF08666 SAF domain LL3_RS06415 PF00486 Transcriptional regulatory protein, C terminal LL3_RS06415 PF00072 Response regulator receiver domain LL3_RS06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS06420 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS06420 PF00672 HAMP domain LL3_RS06430 PF01925 Sulfite exporter TauE/SafE LL3_RS06435 PF05163 DinB family LL3_RS06440 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS06450 PF01476 LysM domain LL3_RS06450 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS06450 PF01471 Putative peptidoglycan binding domain LL3_RS06455 PF08000 Bacterial PH domain LL3_RS06460 PF05908 Poly-gamma-glutamate hydrolase LL3_RS06465 PF06114 IrrE N-terminal-like domain LL3_RS06470 PF01381 Helix-turn-helix LL3_RS06485 PF01695 IstB-like ATP binding protein LL3_RS06495 PF17356 Phage-like element PBSX protein XtrA LL3_RS06500 PF08281 Sigma-70, region 4 LL3_RS06505 PF10668 Phage terminase small subunit LL3_RS06505 PF03592 Terminase small subunit LL3_RS06510 PF17288 Terminase RNAseH like domain LL3_RS06510 PF04466 Phage terminase large subunit LL3_RS06515 PF04860 Phage portal protein LL3_RS06520 PF14550 Putative phage serine protease XkdF LL3_RS06525 PF05065 Phage capsid family LL3_RS06530 PF11436 Protein of unknown function (DUF3199) LL3_RS06535 PF12206 Domain of unknown function (DUF3599) LL3_RS06540 PF04883 Bacteriophage HK97-gp10, putative tail-component LL3_RS06555 PF04984 Phage tail sheath protein subtilisin-like domain LL3_RS06555 PF17482 Phage tail sheath C-terminal domain LL3_RS06555 PF17481 Phage tail sheath protein beta-sandwich domain LL3_RS06560 PF09393 Phage tail tube protein LL3_RS06565 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC LL3_RS06570 PF01464 Transglycosylase SLT domain LL3_RS06570 PF01464 Transglycosylase SLT domain LL3_RS06570 PF01464 Transglycosylase SLT domain LL3_RS06575 PF01476 LysM domain LL3_RS06585 PF10844 Protein of unknown function (DUF2577) LL3_RS06590 PF10934 Protein of unknown function (DUF2634) LL3_RS06595 PF04865 Baseplate J-like protein LL3_RS06600 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LL3_RS06615 PF09636 XkdW protein LL3_RS06620 PF09693 Phage uncharacterised protein (Phage_XkdX) LL3_RS06630 PF10779 Haemolysin XhlA LL3_RS06635 PF04688 SPP1 phage holin LL3_RS06640 PF01471 Putative peptidoglycan binding domain LL3_RS06640 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS06640 PF01476 LysM domain LL3_RS06645 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system LL3_RS06650 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LL3_RS06655 PF01384 Phosphate transporter family LL3_RS06660 PF01865 Protein of unknown function DUF47 LL3_RS06665 PF13520 Amino acid permease LL3_RS06670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS06675 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LL3_RS06680 PF00535 Glycosyl transferase family 2 LL3_RS06685 PF13180 PDZ domain LL3_RS06690 PF07690 Major Facilitator Superfamily LL3_RS06695 PF04951 D-aminopeptidase LL3_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS06705 PF12911 N-terminal TM domain of oligopeptide transport permease C LL3_RS06710 PF00005 ABC transporter LL3_RS06710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS06715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LL3_RS06720 PF17676 LD-carboxypeptidase C-terminal domain LL3_RS06720 PF02016 LD-carboxypeptidase N-terminal domain LL3_RS06725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL3_RS06725 PF13378 Enolase C-terminal domain-like LL3_RS06730 PF00877 NlpC/P60 family LL3_RS06735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LL3_RS06735 PF00005 ABC transporter LL3_RS06740 PF10282 Lactonase, 7-bladed beta-propeller LL3_RS06750 PF03061 Thioesterase superfamily LL3_RS06755 PF13302 Acetyltransferase (GNAT) domain LL3_RS06760 PF00893 Small Multidrug Resistance protein LL3_RS06765 PF00893 Small Multidrug Resistance protein LL3_RS06770 PF00551 Formyl transferase LL3_RS06770 PF01842 ACT domain LL3_RS06775 PF00696 Amino acid kinase family LL3_RS06775 PF01472 PUA domain LL3_RS06780 PF00171 Aldehyde dehydrogenase family LL3_RS06785 PF02566 OsmC-like protein LL3_RS06790 PF01047 MarR family LL3_RS06795 PF02566 OsmC-like protein LL3_RS06810 PF13181 Tetratricopeptide repeat LL3_RS06810 PF00535 Glycosyl transferase family 2 LL3_RS06820 PF12832 MFS_1 like family LL3_RS06825 PF00027 Cyclic nucleotide-binding domain LL3_RS06830 PF08267 Cobalamin-independent synthase, N-terminal domain LL3_RS06830 PF01717 Cobalamin-independent synthase, Catalytic domain LL3_RS06835 PF00082 Subtilase family LL3_RS06840 PF01740 STAS domain LL3_RS06845 PF02361 Cobalt transport protein LL3_RS06850 PF00005 ABC transporter LL3_RS06855 PF09819 ABC-type cobalt transport system, permease component LL3_RS06860 PF00704 Glycosyl hydrolases family 18 LL3_RS06860 PF01476 LysM domain LL3_RS06865 PF00571 CBS domain LL3_RS06865 PF01769 Divalent cation transporter LL3_RS06865 PF03448 MgtE intracellular N domain LL3_RS06870 PF13411 MerR HTH family regulatory protein LL3_RS06880 PF01047 MarR family LL3_RS06890 PF01068 ATP dependent DNA ligase domain LL3_RS06895 PF02735 Ku70/Ku80 beta-barrel domain LL3_RS06900 PF00563 EAL domain LL3_RS06900 PF03707 Bacterial signalling protein N terminal repeat LL3_RS06900 PF00990 Diguanylate cyclase, GGDEF domain LL3_RS06905 PF09335 SNARE associated Golgi protein LL3_RS06910 PF03741 Integral membrane protein TerC family LL3_RS06915 PF04542 Sigma-70 region 2 LL3_RS06920 PF12791 Anti-sigma factor N-terminus LL3_RS06925 PF00269 Small, acid-soluble spore proteins, alpha/beta type LL3_RS06930 PF08876 Domain of unknown function (DUF1836) LL3_RS06935 PF01435 Peptidase family M48 LL3_RS06940 PF02386 Cation transport protein LL3_RS06945 PF04239 Protein of unknown function (DUF421) LL3_RS06950 PF01757 Acyltransferase family LL3_RS06955 PF00989 PAS fold LL3_RS06955 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS06955 PF13188 PAS domain LL3_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS06955 PF13426 PAS domain LL3_RS06960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LL3_RS06960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LL3_RS06965 PF01008 Initiation factor 2 subunit family LL3_RS06970 PF01636 Phosphotransferase enzyme family LL3_RS06975 PF00795 Carbon-nitrogen hydrolase LL3_RS06980 PF00155 Aminotransferase class I and II LL3_RS06985 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LL3_RS06985 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LL3_RS06995 PF00596 Class II Aldolase and Adducin N-terminal domain LL3_RS07000 PF03079 ARD/ARD' family LL3_RS07005 PF09388 Spo0E like sporulation regulatory protein LL3_RS07010 PF02743 Cache domain LL3_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS07010 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS07015 PF01047 MarR family LL3_RS07020 PF00691 OmpA family LL3_RS07020 PF13677 Membrane MotB of proton-channel complex MotA/MotB LL3_RS07025 PF01618 MotA/TolQ/ExbB proton channel family LL3_RS07030 PF10431 C-terminal, D2-small domain, of ClpB protein LL3_RS07030 PF07724 AAA domain (Cdc48 subfamily) LL3_RS07030 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS07030 PF17871 AAA lid domain LL3_RS07045 PF06508 Queuosine biosynthesis protein QueC LL3_RS07050 PF01242 6-pyruvoyl tetrahydropterin synthase LL3_RS07055 PF04055 Radical SAM superfamily LL3_RS07060 PF14489 QueF-like protein LL3_RS07065 PF11514 Protein of unknown function (DUF3219) LL3_RS07070 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LL3_RS07080 PF07486 Cell Wall Hydrolase LL3_RS07085 PF01943 Polysaccharide biosynthesis protein LL3_RS07090 PF00578 AhpC/TSA family LL3_RS07100 PF01321 Creatinase/Prolidase N-terminal domain LL3_RS07100 PF00557 Metallopeptidase family M24 LL3_RS07105 PF00356 Bacterial regulatory proteins, lacI family LL3_RS07105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LL3_RS07110 PF03123 CAT RNA binding domain LL3_RS07110 PF00874 PRD domain LL3_RS07115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LL3_RS07115 PF02378 Phosphotransferase system, EIIC LL3_RS07115 PF00367 phosphotransferase system, EIIB LL3_RS07120 PF00381 PTS HPr component phosphorylation site LL3_RS07125 PF02896 PEP-utilising enzyme, TIM barrel domain LL3_RS07125 PF00391 PEP-utilising enzyme, mobile domain LL3_RS07125 PF05524 PEP-utilising enzyme, N-terminal LL3_RS07130 PF11132 Transcriptional regulator protein (SplA) LL3_RS07140 PF02743 Cache domain LL3_RS07140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS07140 PF00672 HAMP domain LL3_RS07145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL3_RS07145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LL3_RS07155 PF00188 Cysteine-rich secretory protein family LL3_RS07160 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS07160 PF00905 Penicillin binding protein transpeptidase domain LL3_RS07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS07165 PF08447 PAS fold LL3_RS07165 PF00989 PAS fold LL3_RS07165 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS07170 PF00155 Aminotransferase class I and II LL3_RS07175 PF00072 Response regulator receiver domain LL3_RS07175 PF01584 CheW-like domain LL3_RS07180 PF14177 YkyB-like protein LL3_RS07185 PF07690 Major Facilitator Superfamily LL3_RS07190 PF01476 LysM domain LL3_RS07190 PF03734 L,D-transpeptidase catalytic domain LL3_RS07195 PF10518 TAT (twin-arginine translocation) pathway signal sequence LL3_RS07195 PF00149 Calcineurin-like phosphoesterase LL3_RS07210 PF00563 EAL domain LL3_RS07210 PF10388 EAL-domain associated signalling protein domain LL3_RS07215 PF08796 Protein of unknown function (DUF1797) LL3_RS07220 PF04308 Ribonuclease H-like LL3_RS07225 PF14156 Antirepressor AbbA LL3_RS07235 PF03466 LysR substrate binding domain LL3_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS07240 PF00258 Flavodoxin LL3_RS07250 PF00258 Flavodoxin LL3_RS07255 PF00132 Bacterial transferase hexapeptide (six repeats) LL3_RS07255 PF14602 Hexapeptide repeat of succinyl-transferase LL3_RS07255 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LL3_RS07260 PF07687 Peptidase dimerisation domain LL3_RS07260 PF01546 Peptidase family M20/M25/M40 LL3_RS07265 PF03698 Uncharacterised protein family (UPF0180) LL3_RS07270 PF00924 Mechanosensitive ion channel LL3_RS07280 PF00578 AhpC/TSA family LL3_RS07295 PF12804 MobA-like NTP transferase domain LL3_RS07300 PF00899 ThiF family LL3_RS07305 PF03453 MoeA N-terminal region (domain I and II) LL3_RS07305 PF03454 MoeA C-terminal region (domain IV) LL3_RS07305 PF00994 Probable molybdopterin binding domain LL3_RS07310 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LL3_RS07315 PF02391 MoaE protein LL3_RS07320 PF02597 ThiS family LL3_RS07325 PF04893 Yip1 domain LL3_RS07330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LL3_RS07335 PF00005 ABC transporter LL3_RS07340 PF12704 MacB-like periplasmic core domain LL3_RS07340 PF02687 FtsX-like permease family LL3_RS07345 PF00455 DeoR C terminal sensor domain LL3_RS07345 PF08220 DeoR-like helix-turn-helix domain LL3_RS07350 PF00294 pfkB family carbohydrate kinase LL3_RS07355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL3_RS07355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS07360 PF10502 Signal peptidase, peptidase S26 LL3_RS07370 PF00005 ABC transporter LL3_RS07370 PF12848 ABC transporter LL3_RS07375 PF02558 Ketopantoate reductase PanE/ApbA LL3_RS07375 PF08546 Ketopantoate reductase PanE/ApbA C terminal LL3_RS07380 PF02073 Thermophilic metalloprotease (M29) LL3_RS07390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LL3_RS07390 PF18277 AbrB C-terminal domain LL3_RS07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS07395 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS07395 PF00989 PAS fold LL3_RS07400 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LL3_RS07405 PF02254 TrkA-N domain LL3_RS07405 PF02080 TrkA-C domain LL3_RS07410 PF01979 Amidohydrolase family LL3_RS07410 PF13382 Adenine deaminase C-terminal domain LL3_RS07415 PF17770 Ribonuclease J C-terminal domain LL3_RS07415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LL3_RS07415 PF00753 Metallo-beta-lactamase superfamily LL3_RS07420 PF07288 Protein of unknown function (DUF1447) LL3_RS07430 PF01327 Polypeptide deformylase LL3_RS07440 PF10368 Putative cell-wall binding lipoprotein LL3_RS07445 PF00676 Dehydrogenase E1 component LL3_RS07450 PF02780 Transketolase, C-terminal domain LL3_RS07450 PF02779 Transketolase, pyrimidine binding domain LL3_RS07455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL3_RS07455 PF00364 Biotin-requiring enzyme LL3_RS07455 PF02817 e3 binding domain LL3_RS07460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS07460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL3_RS07470 PF03422 Carbohydrate binding module (family 6) LL3_RS07470 PF01522 Polysaccharide deacetylase LL3_RS07470 PF00457 Glycosyl hydrolases family 11 LL3_RS07475 PF01276 Orn/Lys/Arg decarboxylase, major domain LL3_RS07475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LL3_RS07480 PF05256 Uncharacterised protein family (UPF0223) LL3_RS07485 PF06335 Protein of unknown function (DUF1054) LL3_RS07495 PF00459 Inositol monophosphatase family LL3_RS07500 PF00583 Acetyltransferase (GNAT) family LL3_RS07505 PF03413 Peptidase propeptide and YPEB domain LL3_RS07505 PF01447 Thermolysin metallopeptidase, catalytic domain LL3_RS07505 PF02868 Thermolysin metallopeptidase, alpha-helical domain LL3_RS07505 PF07504 Fungalysin/Thermolysin Propeptide Motif LL3_RS07515 PF13490 Putative zinc-finger LL3_RS07525 PF17259 Family of unknown function (DUF5325) LL3_RS07530 PF00009 Elongation factor Tu GTP binding domain LL3_RS07530 PF14492 Elongation Factor G, domain II LL3_RS07530 PF03144 Elongation factor Tu domain 2 LL3_RS07530 PF00679 Elongation factor G C-terminus LL3_RS07535 PF14036 YlaH-like protein LL3_RS07540 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LL3_RS07545 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LL3_RS07550 PF02562 PhoH-like protein LL3_RS07550 PF13638 PIN domain LL3_RS07650 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS07660 PF06605 Prophage endopeptidase tail LL3_RS07665 PF01464 Transglycosylase SLT domain LL3_RS07665 PF01551 Peptidase family M23 LL3_RS07665 PF10145 Phage-related minor tail protein LL3_RS07670 PF01464 Transglycosylase SLT domain LL3_RS07670 PF01551 Peptidase family M23 LL3_RS07670 PF10145 Phage-related minor tail protein LL3_RS07680 PF00589 Phage integrase family LL3_RS07680 PF02899 Phage integrase, N-terminal SAM-like domain LL3_RS07785 PF04960 Glutaminase LL3_RS07790 PF07408 Protein of unknown function (DUF1507) LL3_RS07795 PF01098 Cell cycle protein LL3_RS07800 PF02436 Conserved carboxylase domain LL3_RS07800 PF02785 Biotin carboxylase C-terminal domain LL3_RS07800 PF00289 Biotin carboxylase, N-terminal domain LL3_RS07800 PF00364 Biotin-requiring enzyme LL3_RS07800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL3_RS07800 PF00682 HMGL-like LL3_RS07805 PF02628 Cytochrome oxidase assembly protein LL3_RS07810 PF01040 UbiA prenyltransferase family LL3_RS07815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LL3_RS07815 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LL3_RS07815 PF00034 Cytochrome c LL3_RS07820 PF00115 Cytochrome C and Quinol oxidase polypeptide I LL3_RS07825 PF00510 Cytochrome c oxidase subunit III LL3_RS07830 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LL3_RS07835 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LL3_RS07840 PF08868 YugN-like family LL3_RS07845 PF00571 CBS domain LL3_RS07850 PF00188 Cysteine-rich secretory protein family LL3_RS07850 PF14504 CAP-associated N-terminal LL3_RS07855 PF14071 Putative coat protein LL3_RS07860 PF14003 YlbE-like protein LL3_RS07865 PF06133 Control of competence regulator ComK, YlbF/YmcA LL3_RS07870 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LL3_RS07880 PF01467 Cytidylyltransferase-like LL3_RS07885 PF07670 Nucleoside recognition LL3_RS07890 PF01734 Patatin-like phospholipase LL3_RS07895 PF05362 Lon protease (S16) C-terminal proteolytic domain LL3_RS07895 PF13180 PDZ domain LL3_RS07900 PF05636 HIGH Nucleotidyl Transferase LL3_RS07905 PF02620 Large ribosomal RNA subunit accumulation protein YceD LL3_RS07915 PF00583 Acetyltransferase (GNAT) family LL3_RS07920 PF02558 Ketopantoate reductase PanE/ApbA LL3_RS07920 PF08546 Ketopantoate reductase PanE/ApbA C terminal LL3_RS07925 PF10079 Bacillithiol biosynthesis BshC LL3_RS07930 PF02381 MraZ protein, putative antitoxin-like LL3_RS07935 PF01795 MraW methylase family LL3_RS07945 PF00905 Penicillin binding protein transpeptidase domain LL3_RS07945 PF03793 PASTA domain LL3_RS07945 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS07950 PF03793 PASTA domain LL3_RS07950 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS07950 PF00905 Penicillin binding protein transpeptidase domain LL3_RS07955 PF01225 Mur ligase family, catalytic domain LL3_RS07955 PF08245 Mur ligase middle domain LL3_RS07955 PF02875 Mur ligase family, glutamate ligase domain LL3_RS07960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LL3_RS07960 PF00953 Glycosyl transferase family 4 LL3_RS07965 PF02875 Mur ligase family, glutamate ligase domain LL3_RS07965 PF08245 Mur ligase middle domain LL3_RS07970 PF01098 Cell cycle protein LL3_RS07975 PF04101 Glycosyltransferase family 28 C-terminal domain LL3_RS07975 PF03033 Glycosyltransferase family 28 N-terminal domain LL3_RS07980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LL3_RS07980 PF01565 FAD binding domain LL3_RS07985 PF08478 POTRA domain, FtsQ-type LL3_RS07990 PF02491 SHS2 domain inserted in FTSA LL3_RS07995 PF12327 FtsZ family, C-terminal domain LL3_RS07995 PF00091 Tubulin/FtsZ family, GTPase domain LL3_RS08000 PF05922 Peptidase inhibitor I9 LL3_RS08000 PF00082 Subtilase family LL3_RS08005 PF03419 Sporulation factor SpoIIGA LL3_RS08010 PF04545 Sigma-70, region 4 LL3_RS08010 PF04542 Sigma-70 region 2 LL3_RS08015 PF04539 Sigma-70 region 3 LL3_RS08015 PF04542 Sigma-70 region 2 LL3_RS08015 PF04545 Sigma-70, region 4 LL3_RS08020 PF00005 ABC transporter LL3_RS08025 PF01546 Peptidase family M20/M25/M40 LL3_RS08025 PF07687 Peptidase dimerisation domain LL3_RS08030 PF05239 PRC-barrel domain LL3_RS08035 PF02578 Multi-copper polyphenol oxidoreductase laccase LL3_RS08040 PF01168 Alanine racemase, N-terminal domain LL3_RS08045 PF04472 Cell division protein SepF LL3_RS08050 PF02325 YGGT family LL3_RS08055 PF17774 Putative RNA-binding domain in YlmH LL3_RS08055 PF01479 S4 domain LL3_RS08060 PF05103 DivIVA protein LL3_RS08070 PF08264 Anticodon-binding domain of tRNA LL3_RS08070 PF00133 tRNA synthetases class I (I, L, M and V) LL3_RS08075 PF01258 Prokaryotic dksA/traR C4-type zinc finger LL3_RS08080 PF01252 Signal peptidase (SPase) II LL3_RS08085 PF01479 S4 domain LL3_RS08085 PF00849 RNA pseudouridylate synthase LL3_RS08090 PF00156 Phosphoribosyl transferase domain LL3_RS08095 PF00860 Permease family LL3_RS08100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LL3_RS08100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LL3_RS08105 PF01979 Amidohydrolase family LL3_RS08110 PF00117 Glutamine amidotransferase class-I LL3_RS08110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LL3_RS08115 PF02142 MGS-like domain LL3_RS08115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL3_RS08115 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LL3_RS08120 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LL3_RS08120 PF00175 Oxidoreductase NAD-binding domain LL3_RS08125 PF01180 Dihydroorotate dehydrogenase LL3_RS08130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LL3_RS08135 PF00156 Phosphoribosyl transferase domain LL3_RS08145 PF01507 Phosphoadenosine phosphosulfate reductase family LL3_RS08150 PF01384 Phosphate transporter family LL3_RS08155 PF01747 ATP-sulfurylase LL3_RS08155 PF14306 PUA-like domain LL3_RS08165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LL3_RS08170 PF01903 CbiX LL3_RS08180 PF00128 Alpha amylase, catalytic domain LL3_RS08180 PF09154 Domain of unknown function (DUF1939) LL3_RS08185 PF05670 NFACT protein RNA binding domain LL3_RS08190 PF00689 Cation transporting ATPase, C-terminus LL3_RS08190 PF00690 Cation transporter/ATPase, N-terminus LL3_RS08195 PF03755 YicC-like family, N-terminal region LL3_RS08195 PF08340 Domain of unknown function (DUF1732) LL3_RS08200 PF04025 Domain of unknown function (DUF370) LL3_RS08205 PF00625 Guanylate kinase LL3_RS08210 PF01192 RNA polymerase Rpb6 LL3_RS08215 PF02441 Flavoprotein LL3_RS08215 PF04127 DNA / pantothenate metabolism flavoprotein LL3_RS08220 PF17764 3′ DNA-binding domain (3′BD) LL3_RS08220 PF18074 Primosomal protein N C-terminal domain LL3_RS08220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LL3_RS08220 PF04851 Type III restriction enzyme, res subunit LL3_RS08220 PF00271 Helicase conserved C-terminal domain LL3_RS08225 PF01327 Polypeptide deformylase LL3_RS08230 PF00551 Formyl transferase LL3_RS08230 PF02911 Formyl transferase, C-terminal domain LL3_RS08235 PF01189 16S rRNA methyltransferase RsmB/F LL3_RS08235 PF01029 NusB family LL3_RS08240 PF04055 Radical SAM superfamily LL3_RS08250 PF03793 PASTA domain LL3_RS08250 PF00069 Protein kinase domain LL3_RS08255 PF16745 RsgA N-terminal domain LL3_RS08255 PF03193 RsgA GTPase LL3_RS08260 PF00834 Ribulose-phosphate 3 epimerase family LL3_RS08265 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LL3_RS08265 PF04263 Thiamin pyrophosphokinase, catalytic domain LL3_RS08270 PF08183 Stage V sporulation protein family LL3_RS08275 PF00830 Ribosomal L28 family LL3_RS08280 PF03780 Asp23 family, cell envelope-related function LL3_RS08285 PF02734 DAK2 domain LL3_RS08285 PF13684 Dihydroxyacetone kinase family LL3_RS08290 PF03315 Serine dehydratase beta chain LL3_RS08290 PF01842 ACT domain LL3_RS08295 PF03313 Serine dehydratase alpha chain LL3_RS08300 PF00270 DEAD/DEAH box helicase LL3_RS08300 PF00271 Helicase conserved C-terminal domain LL3_RS08300 PF17191 RecG wedge domain LL3_RS08305 PF03061 Thioesterase superfamily LL3_RS08310 PF02504 Fatty acid synthesis protein LL3_RS08315 PF00698 Acyl transferase domain LL3_RS08325 PF00550 Phosphopantetheine attachment site LL3_RS08330 PF14622 Ribonuclease-III-like LL3_RS08330 PF00035 Double-stranded RNA binding motif LL3_RS08335 PF06470 SMC proteins Flexible Hinge Domain LL3_RS08335 PF02463 RecF/RecN/SMC N terminal domain LL3_RS08340 PF00448 SRP54-type protein, GTPase domain LL3_RS08340 PF02881 SRP54-type protein, helical bundle domain LL3_RS08345 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LL3_RS08350 PF02978 Signal peptide binding domain LL3_RS08350 PF02881 SRP54-type protein, helical bundle domain LL3_RS08350 PF00448 SRP54-type protein, GTPase domain LL3_RS08355 PF00886 Ribosomal protein S16 LL3_RS08365 PF11068 YlqD protein LL3_RS08370 PF01782 RimM N-terminal domain LL3_RS08370 PF05239 PRC-barrel domain LL3_RS08375 PF01746 tRNA (Guanine-1)-methyltransferase LL3_RS08380 PF01245 Ribosomal protein L19 LL3_RS08385 PF01926 50S ribosome-binding GTPase LL3_RS08390 PF01351 Ribonuclease HII LL3_RS08400 PF01312 FlhB HrpN YscU SpaS Family LL3_RS08405 PF00549 CoA-ligase LL3_RS08405 PF08442 ATP-grasp domain LL3_RS08410 PF02629 CoA binding domain LL3_RS08410 PF00549 CoA-ligase LL3_RS08415 PF02481 DNA recombination-mediator protein A LL3_RS08420 PF01396 Topoisomerase DNA binding C4 zinc finger LL3_RS08420 PF01131 DNA topoisomerase LL3_RS08420 PF01751 Toprim domain LL3_RS08425 PF01134 Glucose inhibited division protein A LL3_RS08430 PF00589 Phage integrase family LL3_RS08430 PF02899 Phage integrase, N-terminal SAM-like domain LL3_RS08435 PF00227 Proteasome subunit LL3_RS08440 PF10431 C-terminal, D2-small domain, of ClpB protein LL3_RS08440 PF07724 AAA domain (Cdc48 subfamily) LL3_RS08440 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS08445 PF08222 CodY helix-turn-helix domain LL3_RS08445 PF06018 CodY GAF-like domain LL3_RS08450 PF00460 Flagella basal body rod protein LL3_RS08455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LL3_RS08455 PF00460 Flagella basal body rod protein LL3_RS08460 PF02049 Flagellar hook-basal body complex protein FliE LL3_RS08465 PF08345 Flagellar M-ring protein C-terminal LL3_RS08465 PF01514 Secretory protein of YscJ/FliF family LL3_RS08470 PF01706 FliG C-terminal domain LL3_RS08470 PF14842 FliG N-terminal domain LL3_RS08470 PF14841 FliG middle domain LL3_RS08475 PF02108 Flagellar assembly protein FliH LL3_RS08480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL3_RS08480 PF18269 T3SS EscN ATPase C-terminal domain LL3_RS08480 PF02874 ATP synthase alpha/beta family, beta-barrel domain LL3_RS08485 PF02050 Flagellar FliJ protein LL3_RS08490 PF03448 MgtE intracellular N domain LL3_RS08495 PF02120 Flagellar hook-length control protein FliK LL3_RS08500 PF03963 Flagellar hook capping protein - N-terminal region LL3_RS08505 PF00460 Flagella basal body rod protein LL3_RS08505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LL3_RS08510 PF06289 Flagellar and Swarming motility proteins LL3_RS08515 PF03748 Flagellar basal body-associated protein FliL LL3_RS08520 PF02154 Flagellar motor switch protein FliM LL3_RS08520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LL3_RS08525 PF04509 CheC-like family LL3_RS08525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LL3_RS08530 PF00072 Response regulator receiver domain LL3_RS08535 PF04347 Flagellar biosynthesis protein, FliO LL3_RS08540 PF00813 FliP family LL3_RS08545 PF01313 Bacterial export proteins, family 3 LL3_RS08550 PF01311 Bacterial export proteins, family 1 LL3_RS08555 PF01312 FlhB HrpN YscU SpaS Family LL3_RS08560 PF00771 FHIPEP family LL3_RS08565 PF00448 SRP54-type protein, GTPase domain LL3_RS08570 PF10609 NUBPL iron-transfer P-loop NTPase LL3_RS08575 PF01339 CheB methylesterase LL3_RS08575 PF00072 Response regulator receiver domain LL3_RS08580 PF01584 CheW-like domain LL3_RS08580 PF02895 Signal transducing histidine kinase, homodimeric domain LL3_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS08580 PF07194 P2 response regulator binding domain LL3_RS08580 PF01627 Hpt domain LL3_RS08585 PF01584 CheW-like domain LL3_RS08590 PF04509 CheC-like family LL3_RS08595 PF03975 CheD chemotactic sensory transduction LL3_RS08600 PF04542 Sigma-70 region 2 LL3_RS08600 PF04539 Sigma-70 region 3 LL3_RS08600 PF04545 Sigma-70, region 4 LL3_RS08610 PF00318 Ribosomal protein S2 LL3_RS08615 PF00889 Elongation factor TS LL3_RS08620 PF00696 Amino acid kinase family LL3_RS08625 PF01765 Ribosome recycling factor LL3_RS08630 PF01255 Putative undecaprenyl diphosphate synthase LL3_RS08640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LL3_RS08640 PF13288 DXP reductoisomerase C-terminal domain LL3_RS08640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LL3_RS08645 PF17820 PDZ domain LL3_RS08645 PF02163 Peptidase family M50 LL3_RS08650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL3_RS08650 PF04073 Aminoacyl-tRNA editing domain LL3_RS08650 PF03129 Anticodon binding domain LL3_RS08655 PF00929 Exonuclease LL3_RS08655 PF02811 PHP domain LL3_RS08655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LL3_RS08655 PF07733 Bacterial DNA polymerase III alpha NTPase domain LL3_RS08655 PF11490 DNA polymerase III polC-type N-terminus II LL3_RS08655 PF14579 Helix-hairpin-helix motif LL3_RS08655 PF14480 DNA polymerase III polC-type N-terminus I LL3_RS08660 PF02576 RimP N-terminal domain LL3_RS08660 PF17384 RimP C-terminal SH3 domain LL3_RS08665 PF08529 NusA N-terminal domain LL3_RS08665 PF13184 NusA-like KH domain LL3_RS08665 PF00575 S1 RNA binding domain LL3_RS08670 PF04296 Protein of unknown function (DUF448) LL3_RS08675 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LL3_RS08680 PF00009 Elongation factor Tu GTP binding domain LL3_RS08680 PF11987 Translation-initiation factor 2 LL3_RS08680 PF04760 Translation initiation factor IF-2, N-terminal region LL3_RS08685 PF04456 Protein of unknown function (DUF503) LL3_RS08690 PF02033 Ribosome-binding factor A LL3_RS08695 PF16198 tRNA pseudouridylate synthase B C-terminal domain LL3_RS08695 PF01509 TruB family pseudouridylate synthase (N terminal domain) LL3_RS08700 PF01687 Riboflavin kinase LL3_RS08700 PF06574 FAD synthetase LL3_RS08705 PF00312 Ribosomal protein S15 LL3_RS08710 PF00575 S1 RNA binding domain LL3_RS08710 PF03725 3' exoribonuclease family, domain 2 LL3_RS08710 PF00013 KH domain LL3_RS08710 PF01138 3' exoribonuclease family, domain 1 LL3_RS08710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LL3_RS08715 PF01522 Polysaccharide deacetylase LL3_RS08720 PF05193 Peptidase M16 inactive domain LL3_RS08720 PF00675 Insulinase (Peptidase family M16) LL3_RS08725 PF05239 PRC-barrel domain LL3_RS08730 PF16924 Dipicolinate synthase subunit A N-terminal domain LL3_RS08730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LL3_RS08735 PF02441 Flavoprotein LL3_RS08740 PF01118 Semialdehyde dehydrogenase, NAD binding domain LL3_RS08740 PF02774 Semialdehyde dehydrogenase, dimerisation domain LL3_RS08745 PF13840 ACT domain LL3_RS08745 PF00696 Amino acid kinase family LL3_RS08750 PF00701 Dihydrodipicolinate synthetase family LL3_RS08755 PF00753 Metallo-beta-lactamase superfamily LL3_RS08755 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LL3_RS08755 PF17770 Ribonuclease J C-terminal domain LL3_RS08760 PF00574 Clp protease LL3_RS08765 PF14035 YlzJ-like protein LL3_RS08770 PF09397 Ftsk gamma domain LL3_RS08770 PF01580 FtsK/SpoIIIE family LL3_RS08770 PF17854 FtsK alpha domain LL3_RS08775 PF00392 Bacterial regulatory proteins, gntR family LL3_RS08775 PF07702 UTRA domain LL3_RS08780 PF07690 Major Facilitator Superfamily LL3_RS08785 PF01047 MarR family LL3_RS08790 PF03176 MMPL family LL3_RS08795 PF05193 Peptidase M16 inactive domain LL3_RS08800 PF00675 Insulinase (Peptidase family M16) LL3_RS08800 PF05193 Peptidase M16 inactive domain LL3_RS08810 PF11588 Protein of unknown function (DUF3243) LL3_RS08815 PF11868 Protein of unknown function (DUF3388) LL3_RS08820 PF13464 Domain of unknown function (DUF4115) LL3_RS08825 PF01066 CDP-alcohol phosphatidyltransferase LL3_RS08830 PF00994 Probable molybdopterin binding domain LL3_RS08830 PF18146 Damage-inducible protein CinA KH domain LL3_RS08830 PF02464 Competence-damaged protein LL3_RS08835 PF00154 recA bacterial DNA recombination protein LL3_RS08840 PF00144 Beta-lactamase LL3_RS08845 PF01966 HD domain LL3_RS08845 PF00013 KH domain LL3_RS08845 PF12072 Domain of unknown function (DUF3552) LL3_RS08850 PF13277 YmdB-like protein LL3_RS08855 PF04232 Stage V sporulation protein S (SpoVS) LL3_RS08860 PF00107 Zinc-binding dehydrogenase LL3_RS08860 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS08865 PF00155 Aminotransferase class I and II LL3_RS08870 PF04055 Radical SAM superfamily LL3_RS08870 PF00919 Uncharacterized protein family UPF0004 LL3_RS08870 PF01938 TRAM domain LL3_RS08875 PF06133 Control of competence regulator ComK, YlbF/YmcA LL3_RS08880 PF10628 Outer spore coat protein E (CotE) LL3_RS08885 PF00488 MutS domain V LL3_RS08885 PF01624 MutS domain I LL3_RS08885 PF05190 MutS family domain IV LL3_RS08885 PF05188 MutS domain II LL3_RS08885 PF05192 MutS domain III LL3_RS08890 PF08676 MutL C terminal dimerisation domain LL3_RS08890 PF01119 DNA mismatch repair protein, C-terminal domain LL3_RS08895 PF00753 Metallo-beta-lactamase superfamily LL3_RS08900 PF00698 Acyl transferase domain LL3_RS08905 PF00698 Acyl transferase domain LL3_RS08910 PF00698 Acyl transferase domain LL3_RS08915 PF00550 Phosphopantetheine attachment site LL3_RS08920 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LL3_RS08920 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LL3_RS08925 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS08930 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS08935 PF00668 Condensation domain LL3_RS08935 PF00501 AMP-binding enzyme LL3_RS08935 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08935 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08935 PF08659 KR domain LL3_RS08935 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08935 PF14765 Polyketide synthase dehydratase LL3_RS08935 PF13193 AMP-binding enzyme C-terminal domain LL3_RS08935 PF00550 Phosphopantetheine attachment site LL3_RS08940 PF08659 KR domain LL3_RS08940 PF00550 Phosphopantetheine attachment site LL3_RS08940 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08940 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08940 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08940 PF14765 Polyketide synthase dehydratase LL3_RS08945 PF08659 KR domain LL3_RS08945 PF08659 KR domain LL3_RS08945 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08945 PF08242 Methyltransferase domain LL3_RS08945 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08945 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08945 PF08242 Methyltransferase domain LL3_RS08945 PF14765 Polyketide synthase dehydratase LL3_RS08945 PF14765 Polyketide synthase dehydratase LL3_RS08945 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08945 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08945 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08945 PF00550 Phosphopantetheine attachment site LL3_RS08945 PF00550 Phosphopantetheine attachment site LL3_RS08950 PF00668 Condensation domain LL3_RS08950 PF13193 AMP-binding enzyme C-terminal domain LL3_RS08950 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08950 PF00501 AMP-binding enzyme LL3_RS08950 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08950 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08950 PF08659 KR domain LL3_RS08950 PF14765 Polyketide synthase dehydratase LL3_RS08950 PF00550 Phosphopantetheine attachment site LL3_RS08955 PF08242 Methyltransferase domain LL3_RS08955 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS08955 PF00550 Phosphopantetheine attachment site LL3_RS08955 PF14765 Polyketide synthase dehydratase LL3_RS08955 PF00975 Thioesterase domain LL3_RS08955 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS08955 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS08960 PF00067 Cytochrome P450 LL3_RS08965 PF14040 Deoxyribonuclease NucA/NucB LL3_RS08970 PF06912 Protein of unknown function (DUF1275) LL3_RS08980 PF00082 Subtilase family LL3_RS08990 PF05908 Poly-gamma-glutamate hydrolase LL3_RS08995 PF02566 OsmC-like protein LL3_RS09000 PF00893 Small Multidrug Resistance protein LL3_RS09005 PF00893 Small Multidrug Resistance protein LL3_RS09015 PF12788 YmaF family LL3_RS09025 PF17209 Hfq protein LL3_RS09030 PF14157 YmzC-like protein LL3_RS09040 PF07972 NrdI Flavodoxin like LL3_RS09045 PF02867 Ribonucleotide reductase, barrel domain LL3_RS09045 PF08343 Ribonucleotide reductase N-terminal LL3_RS09045 PF00317 Ribonucleotide reductase, all-alpha domain LL3_RS09050 PF00268 Ribonucleotide reductase, small chain LL3_RS09070 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS09070 PF17866 AAA lid domain LL3_RS09075 PF13167 GTP-binding GTPase N-terminal LL3_RS09075 PF01926 50S ribosome-binding GTPase LL3_RS09075 PF16360 GTP-binding GTPase Middle Region LL3_RS09080 PF06838 Methionine gamma-lyase LL3_RS09085 PF13411 MerR HTH family regulatory protein LL3_RS09090 PF00120 Glutamine synthetase, catalytic domain LL3_RS09090 PF03951 Glutamine synthetase, beta-Grasp domain LL3_RS09115 PF00457 Glycosyl hydrolases family 11 LL3_RS09120 PF00067 Cytochrome P450 LL3_RS09130 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LL3_RS09130 PF04616 Glycosyl hydrolases family 43 LL3_RS09135 PF00480 ROK family LL3_RS09140 PF01261 Xylose isomerase-like TIM barrel LL3_RS09145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL3_RS09145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL3_RS09150 PF00457 Glycosyl hydrolases family 11 LL3_RS09155 PF00391 PEP-utilising enzyme, mobile domain LL3_RS09155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LL3_RS09165 PF00107 Zinc-binding dehydrogenase LL3_RS09165 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS09175 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS09185 PF05163 DinB family LL3_RS09190 PF00107 Zinc-binding dehydrogenase LL3_RS09190 PF08240 Alcohol dehydrogenase GroES-like domain LL3_RS09205 PF13217 Protein of unknown function (DUF4025) LL3_RS09210 PF17094 Uncharacterised protein family (UPF0715) LL3_RS09215 PF00583 Acetyltransferase (GNAT) family LL3_RS09215 PF14268 YoaP-like LL3_RS09235 PF16302 Domain of unknown function (DUF4944) LL3_RS09240 PF13021 Domain of unknown function (DUF3885) LL3_RS09250 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LL3_RS09250 PF18416 N-acetylglucosamine binding protein domain 2 LL3_RS09265 PF12708 Pectate lyase superfamily protein LL3_RS09265 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LL3_RS09270 PF05154 TM2 domain LL3_RS09275 PF00692 dUTPase LL3_RS09280 PF13783 Domain of unknown function (DUF4177) LL3_RS09285 PF05908 Poly-gamma-glutamate hydrolase LL3_RS09295 PF10710 Protein of unknown function (DUF2512) LL3_RS09305 PF00717 Peptidase S24-like LL3_RS09305 PF01726 LexA DNA binding domain LL3_RS09310 PF01476 LysM domain LL3_RS09315 PF00239 Resolvase, N terminal domain LL3_RS09320 PF05979 Bacterial protein of unknown function (DUF896) LL3_RS09325 PF02779 Transketolase, pyrimidine binding domain LL3_RS09325 PF02780 Transketolase, C-terminal domain LL3_RS09325 PF00456 Transketolase, thiamine diphosphate binding domain LL3_RS09330 PF10747 Sporulation inhibitor of replication protein SirA LL3_RS09335 PF03672 Uncharacterised protein family (UPF0154) LL3_RS09340 PF09388 Spo0E like sporulation regulatory protein LL3_RS09345 PF02683 Cytochrome C biogenesis protein transmembrane region LL3_RS09350 PF00072 Response regulator receiver domain LL3_RS09355 PF07301 Protein of unknown function (DUF1453) LL3_RS09360 PF11084 Protein of unknown function (DUF2621) LL3_RS09370 PF08179 Small acid-soluble spore protein P family LL3_RS09380 PF00330 Aconitase family (aconitate hydratase) LL3_RS09380 PF00694 Aconitase C-terminal domain LL3_RS09385 PF00578 AhpC/TSA family LL3_RS09390 PF08177 Small acid-soluble spore protein N family LL3_RS09400 PF03061 Thioesterase superfamily LL3_RS09410 PF01521 Iron-sulphur cluster biosynthesis LL3_RS09415 PF02660 Glycerol-3-phosphate acyltransferase LL3_RS09420 PF13380 CoA binding domain LL3_RS09425 PF01751 Toprim domain LL3_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS09425 PF00204 DNA gyrase B LL3_RS09425 PF00986 DNA gyrase B subunit, carboxyl terminus LL3_RS09430 PF03989 DNA gyrase C-terminal domain, beta-propeller LL3_RS09430 PF00521 DNA gyrase/topoisomerase IV, subunit A LL3_RS09440 PF01235 Sodium:alanine symporter family LL3_RS09450 PF13761 Domain of unknown function (DUF4166) LL3_RS09455 PF14158 YndJ-like protein LL3_RS09470 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS09475 PF00072 Response regulator receiver domain LL3_RS09475 PF00486 Transcriptional regulatory protein, C terminal LL3_RS09480 PF17189 Glycosyl hydrolase family 30 beta sandwich domain LL3_RS09480 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain LL3_RS09485 PF03422 Carbohydrate binding module (family 6) LL3_RS09485 PF04616 Glycosyl hydrolases family 43 LL3_RS09490 PF00668 Condensation domain LL3_RS09490 PF00550 Phosphopantetheine attachment site LL3_RS09490 PF00975 Thioesterase domain LL3_RS09490 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09490 PF00501 AMP-binding enzyme LL3_RS09495 PF00668 Condensation domain LL3_RS09495 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09495 PF00550 Phosphopantetheine attachment site LL3_RS09495 PF00501 AMP-binding enzyme LL3_RS09500 PF02801 Beta-ketoacyl synthase, C-terminal domain LL3_RS09500 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09500 PF00501 AMP-binding enzyme LL3_RS09500 PF00109 Beta-ketoacyl synthase, N-terminal domain LL3_RS09500 PF00668 Condensation domain LL3_RS09500 PF00550 Phosphopantetheine attachment site LL3_RS09500 PF16197 Ketoacyl-synthetase C-terminal extension LL3_RS09500 PF00202 Aminotransferase class-III LL3_RS09505 PF00698 Acyl transferase domain LL3_RS09515 PF01144 Coenzyme A transferase LL3_RS09520 PF01144 Coenzyme A transferase LL3_RS09525 PF00067 Cytochrome P450 LL3_RS09530 PF06968 Biotin and Thiamin Synthesis associated domain LL3_RS09530 PF04055 Radical SAM superfamily LL3_RS09540 PF00155 Aminotransferase class I and II LL3_RS09545 PF00202 Aminotransferase class-III LL3_RS09550 PF03744 6-carboxyhexanoate--CoA ligase LL3_RS09555 PF04138 GtrA-like protein LL3_RS09560 PF00483 Nucleotidyl transferase LL3_RS09565 PF09335 SNARE associated Golgi protein LL3_RS09570 PF01039 Carboxyl transferase domain LL3_RS09575 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS09580 PF00682 HMGL-like LL3_RS09585 PF00364 Biotin-requiring enzyme LL3_RS09590 PF00289 Biotin carboxylase, N-terminal domain LL3_RS09590 PF02785 Biotin carboxylase C-terminal domain LL3_RS09590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL3_RS09595 PF00501 AMP-binding enzyme LL3_RS09595 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL3_RS09600 PF02770 Acyl-CoA dehydrogenase, middle domain LL3_RS09600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL3_RS09605 PF02638 Glycosyl hydrolase-like 10 LL3_RS09610 PF07098 Protein of unknown function (DUF1360) LL3_RS09615 PF00501 AMP-binding enzyme LL3_RS09615 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09615 PF00668 Condensation domain LL3_RS09615 PF00550 Phosphopantetheine attachment site LL3_RS09615 PF00975 Thioesterase domain LL3_RS09620 PF00550 Phosphopantetheine attachment site LL3_RS09620 PF00501 AMP-binding enzyme LL3_RS09620 PF00668 Condensation domain LL3_RS09620 PF13193 AMP-binding enzyme C-terminal domain LL3_RS09625 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LL3_RS09630 PF01263 Aldose 1-epimerase LL3_RS09635 PF01554 MatE LL3_RS09640 PF16800 IseA DL-endopeptidase inhibitor LL3_RS09650 PF00589 Phage integrase family LL3_RS09655 PF12728 Helix-turn-helix domain LL3_RS09665 PF07690 Major Facilitator Superfamily LL3_RS09680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS09680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LL3_RS09685 PF04898 Glutamate synthase central domain LL3_RS09685 PF01493 GXGXG motif LL3_RS09685 PF00310 Glutamine amidotransferases class-II LL3_RS09685 PF01645 Conserved region in glutamate synthase LL3_RS09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS09690 PF03466 LysR substrate binding domain LL3_RS09695 PF00696 Amino acid kinase family LL3_RS09695 PF01472 PUA domain LL3_RS09700 PF14748 Pyrroline-5-carboxylate reductase dimerisation LL3_RS09700 PF03807 NADP oxidoreductase coenzyme F420-dependent LL3_RS09705 PF02334 Replication terminator protein LL3_RS09710 PF00106 short chain dehydrogenase LL3_RS09715 PF06103 Bacterial protein of unknown function (DUF948) LL3_RS09730 PF13091 PLD-like domain LL3_RS09730 PF13396 Phospholipase_D-nuclease N-terminal LL3_RS09740 PF04239 Protein of unknown function (DUF421) LL3_RS09750 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS09755 PF07451 Stage V sporulation protein AD (SpoVAD) LL3_RS09760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS09785 PF00239 Resolvase, N terminal domain LL3_RS09785 PF02796 Helix-turn-helix domain of resolvase LL3_RS09790 PF13700 Domain of unknown function (DUF4158) LL3_RS09790 PF01526 Tn3 transposase DDE domain LL3_RS09795 PF07690 Major Facilitator Superfamily LL3_RS09800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL3_RS09800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL3_RS09805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL3_RS09805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL3_RS09840 PF01588 Putative tRNA binding domain LL3_RS09845 PF07883 Cupin domain LL3_RS09845 PF12833 Helix-turn-helix domain LL3_RS09850 PF00440 Bacterial regulatory proteins, tetR family LL3_RS09850 PF13305 Tetracyclin repressor-like, C-terminal domain LL3_RS09855 PF00753 Metallo-beta-lactamase superfamily LL3_RS09865 PF01022 Bacterial regulatory protein, arsR family LL3_RS09875 PF04238 Protein of unknown function (DUF420) LL3_RS09880 PF18846 Bacterial archaeo-eukaryotic release factor family 5 LL3_RS09890 PF17676 LD-carboxypeptidase C-terminal domain LL3_RS09890 PF02016 LD-carboxypeptidase N-terminal domain LL3_RS09900 PF01476 LysM domain LL3_RS09900 PF06725 3D domain LL3_RS09905 PF16124 RecQ zinc-binding LL3_RS09905 PF09382 RQC domain LL3_RS09905 PF00570 HRDC domain LL3_RS09905 PF00271 Helicase conserved C-terminal domain LL3_RS09905 PF00270 DEAD/DEAH box helicase LL3_RS09915 PF02525 Flavodoxin-like fold LL3_RS09920 PF01258 Prokaryotic dksA/traR C4-type zinc finger LL3_RS09935 PF00011 Hsp20/alpha crystallin family LL3_RS09950 PF08000 Bacterial PH domain LL3_RS09960 PF00171 Aldehyde dehydrogenase family LL3_RS09965 PF13243 Squalene-hopene cyclase C-terminal domain LL3_RS09965 PF13249 Squalene-hopene cyclase N-terminal domain LL3_RS09970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LL3_RS09970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LL3_RS09975 PF00209 Sodium:neurotransmitter symporter family LL3_RS09980 PF01758 Sodium Bile acid symporter family LL3_RS09985 PF00753 Metallo-beta-lactamase superfamily LL3_RS09990 PF00364 Biotin-requiring enzyme LL3_RS09990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL3_RS09990 PF02817 e3 binding domain LL3_RS09995 PF00676 Dehydrogenase E1 component LL3_RS09995 PF16870 2-oxoglutarate dehydrogenase C-terminal LL3_RS09995 PF02779 Transketolase, pyrimidine binding domain LL3_RS10000 PF00092 von Willebrand factor type A domain LL3_RS10005 PF07728 AAA domain (dynein-related subfamily) LL3_RS10010 PF13627 Prokaryotic lipoprotein-attachment site LL3_RS10010 PF00080 Copper/zinc superoxide dismutase (SODC) LL3_RS10015 PF01476 LysM domain LL3_RS10015 PF00877 NlpC/P60 family LL3_RS10020 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LL3_RS10025 PF02457 DisA bacterial checkpoint controller nucleotide-binding LL3_RS10025 PF10372 Bacterial membrane-spanning protein N-terminus LL3_RS10030 PF01554 MatE LL3_RS10035 PF01740 STAS domain LL3_RS10040 PF02585 GlcNAc-PI de-N-acetylase LL3_RS10045 PF08830 Protein of unknown function (DUF1806) LL3_RS10055 PF00892 EamA-like transporter family LL3_RS10070 PF14552 Tautomerase enzyme LL3_RS10080 PF01638 HxlR-like helix-turn-helix LL3_RS10085 PF00881 Nitroreductase family LL3_RS10090 PF01738 Dienelactone hydrolase family LL3_RS10095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS10100 PF11755 Protein of unknown function (DUF3311) LL3_RS10105 PF00474 Sodium:solute symporter family LL3_RS10115 PF00232 Glycosyl hydrolase family 1 LL3_RS10120 PF07702 UTRA domain LL3_RS10120 PF00392 Bacterial regulatory proteins, gntR family LL3_RS10125 PF03572 Peptidase family S41 LL3_RS10125 PF01471 Putative peptidoglycan binding domain LL3_RS10125 PF17820 PDZ domain LL3_RS10130 PF08241 Methyltransferase domain LL3_RS10140 PF02557 D-alanyl-D-alanine carboxypeptidase LL3_RS10145 PF01048 Phosphorylase superfamily LL3_RS10150 PF14191 YodL-like LL3_RS10155 PF01569 PAP2 superfamily LL3_RS10170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS10175 PF06855 YozE SAM-like fold LL3_RS10180 PF14122 YokU-like protein, putative antitoxin LL3_RS10185 PF12544 Lysine-2,3-aminomutase LL3_RS10190 PF00583 Acetyltransferase (GNAT) family LL3_RS10195 PF01546 Peptidase family M20/M25/M40 LL3_RS10195 PF07687 Peptidase dimerisation domain LL3_RS10200 PF01144 Coenzyme A transferase LL3_RS10205 PF01144 Coenzyme A transferase LL3_RS10210 PF00202 Aminotransferase class-III LL3_RS10220 PF06445 GyrI-like small molecule binding domain LL3_RS10230 PF00583 Acetyltransferase (GNAT) family LL3_RS10235 PF00535 Glycosyl transferase family 2 LL3_RS10250 PF12996 DUF based on E. rectale Gene description (DUF3880) LL3_RS10255 PF02333 Phytase LL3_RS10260 PF08485 Polysaccharide biosynthesis protein C-terminal LL3_RS10260 PF02719 Polysaccharide biosynthesis protein LL3_RS10270 PF01070 FMN-dependent dehydrogenase LL3_RS10285 PF07508 Recombinase LL3_RS10285 PF00239 Resolvase, N terminal domain LL3_RS10290 PF02719 Polysaccharide biosynthesis protein LL3_RS10295 PF01641 SelR domain LL3_RS10300 PF01625 Peptide methionine sulfoxide reductase LL3_RS10305 PF01047 MarR family LL3_RS10310 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LL3_RS10315 PF13472 GDSL-like Lipase/Acylhydrolase family LL3_RS10320 PF02630 SCO1/SenC LL3_RS10325 PF10751 Protein of unknown function (DUF2535) LL3_RS10330 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS10330 PF00585 C-terminal regulatory domain of Threonine dehydratase LL3_RS10335 PF08461 Ribonuclease R winged-helix domain LL3_RS10335 PF00158 Sigma-54 interaction domain LL3_RS10340 PF03006 Haemolysin-III related LL3_RS10350 PF00186 Dihydrofolate reductase LL3_RS10355 PF00303 Thymidylate synthase LL3_RS10360 PF14005 YpjP-like protein LL3_RS10365 PF04445 Putative SAM-dependent methyltransferase LL3_RS10370 PF06491 Disulphide isomerase LL3_RS10375 PF00920 Dehydratase family LL3_RS10380 PF13769 Virulence factor LL3_RS10380 PF08712 Scaffold protein Nfu/NifU N terminal LL3_RS10385 PF01966 HD domain LL3_RS10390 PF00255 Glutathione peroxidase LL3_RS10395 PF04204 Homoserine O-succinyltransferase LL3_RS10400 PF00534 Glycosyl transferases group 1 LL3_RS10400 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LL3_RS10405 PF00313 'Cold-shock' DNA-binding domain LL3_RS10415 PF10819 Protein of unknown function (DUF2564) LL3_RS10420 PF10782 Zinc-finger LL3_RS10425 PF13456 Reverse transcriptase-like LL3_RS10430 PF02592 Putative vitamin uptake transporter LL3_RS10435 PF13456 Reverse transcriptase-like LL3_RS10445 PF01367 5'-3' exonuclease, C-terminal SAM fold LL3_RS10445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL3_RS10450 PF10752 Protein of unknown function (DUF2533) LL3_RS10455 PF00350 Dynamin family LL3_RS10460 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LL3_RS10465 PF02797 Chalcone and stilbene synthases, C-terminal domain LL3_RS10465 PF00195 Chalcone and stilbene synthases, N-terminal domain LL3_RS10485 PF00860 Permease family LL3_RS10495 PF13443 Cro/C1-type HTH DNA-binding domain LL3_RS10520 PF00149 Calcineurin-like phosphoesterase LL3_RS10525 PF00269 Small, acid-soluble spore proteins, alpha/beta type LL3_RS10560 PF00186 Dihydrofolate reductase LL3_RS10565 PF00303 Thymidylate synthase LL3_RS10595 PF00692 dUTPase LL3_RS10605 PF00085 Thioredoxin LL3_RS10615 PF00268 Ribonucleotide reductase, small chain LL3_RS10630 PF14528 LAGLIDADG-like domain LL3_RS10630 PF02867 Ribonucleotide reductase, barrel domain LL3_RS10630 PF00317 Ribonucleotide reductase, all-alpha domain LL3_RS10630 PF08343 Ribonucleotide reductase N-terminal LL3_RS10645 PF08343 Ribonucleotide reductase N-terminal LL3_RS10645 PF00317 Ribonucleotide reductase, all-alpha domain LL3_RS10645 PF14528 LAGLIDADG-like domain LL3_RS10645 PF02867 Ribonucleotide reductase, barrel domain LL3_RS10650 PF07972 NrdI Flavodoxin like LL3_RS10725 PF00145 C-5 cytosine-specific DNA methylase LL3_RS10730 PF01555 DNA methylase LL3_RS10740 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) LL3_RS10745 PF02223 Thymidylate kinase LL3_RS10750 PF09629 YorP protein LL3_RS10755 PF06725 3D domain LL3_RS10760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LL3_RS10760 PF07733 Bacterial DNA polymerase III alpha NTPase domain LL3_RS10760 PF02811 PHP domain LL3_RS10760 PF14579 Helix-hairpin-helix motif LL3_RS10765 PF01368 DHH family LL3_RS10765 PF17768 RecJ OB domain LL3_RS10775 PF03796 DnaB-like helicase C terminal domain LL3_RS10810 PF13229 Right handed beta helix region LL3_RS10815 PF05908 Poly-gamma-glutamate hydrolase LL3_RS10850 PF02586 SOS response associated peptidase (SRAP) LL3_RS10855 PF01068 ATP dependent DNA ligase domain LL3_RS10890 PF14037 YoqO-like protein LL3_RS10945 PF09643 YopX protein LL3_RS10970 PF13443 Cro/C1-type HTH DNA-binding domain LL3_RS10980 PF14072 DNA-sulfur modification-associated LL3_RS11055 PF13443 Cro/C1-type HTH DNA-binding domain LL3_RS11065 PF01757 Acyltransferase family LL3_RS11070 PF17094 Uncharacterised protein family (UPF0715) LL3_RS11085 PF09669 Phage regulatory protein Rha (Phage_pRha) LL3_RS11085 PF03374 Phage antirepressor protein KilAC domain LL3_RS11090 PF13361 UvrD-like helicase C-terminal domain LL3_RS11090 PF00580 UvrD/REP helicase N-terminal domain LL3_RS11160 PF00216 Bacterial DNA-binding protein LL3_RS11170 PF09642 YonK protein LL3_RS11190 PF03237 Terminase-like family LL3_RS11285 PF13495 Phage integrase, N-terminal SAM-like domain LL3_RS11285 PF00589 Phage integrase family LL3_RS11320 PF05709 Phage tail protein LL3_RS11325 PF06605 Prophage endopeptidase tail LL3_RS11340 PF12708 Pectate lyase superfamily protein LL3_RS11340 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LL3_RS11370 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS11375 PF11799 impB/mucB/samB family C-terminal domain LL3_RS11375 PF11798 IMS family HHH motif LL3_RS11375 PF00817 impB/mucB/samB family LL3_RS11380 PF01348 Type II intron maturase LL3_RS11380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LL3_RS11390 PF08863 YolD-like protein LL3_RS11395 PF09560 Sporulation protein YunB (Spo_YunB) LL3_RS11410 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LL3_RS11410 PF04740 LXG domain of WXG superfamily LL3_RS11415 PF05901 Excalibur calcium-binding domain LL3_RS11415 PF00565 Staphylococcal nuclease homologue LL3_RS11425 PF00860 Permease family LL3_RS11430 PF00156 Phosphoribosyl transferase domain LL3_RS11435 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LL3_RS11440 PF13307 Helicase C-terminal domain LL3_RS11455 PF01170 Putative RNA methylase family UPF0020 LL3_RS11455 PF02926 THUMP domain LL3_RS11460 PF05103 DivIVA protein LL3_RS11465 PF06908 YspA SLOG family LL3_RS11470 PF13482 RNase_H superfamily LL3_RS11475 PF09369 Domain of unknown function (DUF1998) LL3_RS11475 PF00271 Helicase conserved C-terminal domain LL3_RS11475 PF00270 DEAD/DEAH box helicase LL3_RS11480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LL3_RS11490 PF14179 YppG-like protein LL3_RS11495 PF14178 YppF-like protein LL3_RS11500 PF08807 Bacterial domain of unknown function (DUF1798) LL3_RS11515 PF10720 Protein of unknown function (DUF2515) LL3_RS11520 PF03838 Recombination protein U LL3_RS11525 PF00905 Penicillin binding protein transpeptidase domain LL3_RS11525 PF00912 Transglycosylase LL3_RS11535 PF10576 Iron-sulfur binding domain of endonuclease III LL3_RS11535 PF00730 HhH-GPD superfamily base excision DNA repair protein LL3_RS11535 PF00633 Helix-hairpin-helix motif LL3_RS11540 PF07261 Replication initiation and membrane attachment LL3_RS11545 PF01336 OB-fold nucleic acid binding domain LL3_RS11545 PF00152 tRNA synthetases class II (D, K and N) LL3_RS11550 PF00155 Aminotransferase class I and II LL3_RS11555 PF03413 Peptidase propeptide and YPEB domain LL3_RS11555 PF17881 Domain of unknown function (DUF5590) LL3_RS11560 PF00929 Exonuclease LL3_RS11560 PF13307 Helicase C-terminal domain LL3_RS11560 PF04851 Type III restriction enzyme, res subunit LL3_RS11565 PF02261 Aspartate decarboxylase LL3_RS11570 PF02569 Pantoate-beta-alanine ligase LL3_RS11575 PF02548 Ketopantoate hydroxymethyltransferase LL3_RS11580 PF02237 Biotin protein ligase C terminal domain LL3_RS11580 PF08279 HTH domain LL3_RS11580 PF03099 Biotin/lipoate A/B protein ligase family LL3_RS11585 PF13735 tRNA nucleotidyltransferase domain 2 putative LL3_RS11585 PF12627 Probable RNA and SrmB- binding site of polymerase A LL3_RS11585 PF01743 Poly A polymerase head domain LL3_RS11590 PF13439 Glycosyltransferase Family 4 LL3_RS11590 PF00534 Glycosyl transferases group 1 LL3_RS11595 PF02585 GlcNAc-PI de-N-acetylase LL3_RS11600 PF02142 MGS-like domain LL3_RS11605 PF01113 Dihydrodipicolinate reductase, N-terminus LL3_RS11605 PF05173 Dihydrodipicolinate reductase, C-terminus LL3_RS11610 PF03819 MazG nucleotide pyrophosphohydrolase domain LL3_RS11615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS11615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS11620 PF00190 Cupin LL3_RS11625 PF09577 Sporulation protein YpjB (SpoYpjB) LL3_RS11630 PF07187 Protein of unknown function (DUF1405) LL3_RS11635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LL3_RS11635 PF00032 Cytochrome b(C-terminal)/b6/petD LL3_RS11640 PF00033 Cytochrome b/b6/petB LL3_RS11645 PF00355 Rieske [2Fe-2S] domain LL3_RS11650 PF10673 Protein of unknown function (DUF2487) LL3_RS11655 PF08864 UPF0302 domain LL3_RS11655 PF08858 IDEAL domain LL3_RS11665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL3_RS11670 PF02153 Prephenate dehydrogenase LL3_RS11670 PF01842 ACT domain LL3_RS11675 PF00155 Aminotransferase class I and II LL3_RS11680 PF00290 Tryptophan synthase alpha chain LL3_RS11685 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS11690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LL3_RS11695 PF00218 Indole-3-glycerol phosphate synthase LL3_RS11700 PF00591 Glycosyl transferase family, a/b domain LL3_RS11700 PF02885 Glycosyl transferase family, helical bundle domain LL3_RS11705 PF00425 chorismate binding enzyme LL3_RS11705 PF04715 Anthranilate synthase component I, N terminal region LL3_RS11710 PF07736 Chorismate mutase type I LL3_RS11715 PF01761 3-dehydroquinate synthase LL3_RS11720 PF01264 Chorismate synthase LL3_RS11725 PF03705 CheR methyltransferase, all-alpha domain LL3_RS11725 PF01739 CheR methyltransferase, SAM binding domain LL3_RS11730 PF00334 Nucleoside diphosphate kinase LL3_RS11735 PF00348 Polyprenyl synthetase LL3_RS11740 PF01209 ubiE/COQ5 methyltransferase family LL3_RS11745 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LL3_RS11750 PF02081 Tryptophan RNA-binding attenuator protein LL3_RS11755 PF01227 GTP cyclohydrolase I LL3_RS11760 PF00216 Bacterial DNA-binding protein LL3_RS11765 PF09547 Stage IV sporulation protein A (spore_IV_A) LL3_RS11775 PF10966 Protein of unknown function (DUF2768) LL3_RS11780 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LL3_RS11780 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LL3_RS11785 PF01926 50S ribosome-binding GTPase LL3_RS11785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LL3_RS11795 PF01070 FMN-dependent dehydrogenase LL3_RS11800 PF00575 S1 RNA binding domain LL3_RS11805 PF02224 Cytidylate kinase LL3_RS11810 PF12945 Flagellar protein YcgR LL3_RS11810 PF07238 PilZ domain LL3_RS11815 PF03413 Peptidase propeptide and YPEB domain LL3_RS11815 PF14620 YpeB sporulation LL3_RS11820 PF07486 Cell Wall Hydrolase LL3_RS11820 PF01471 Putative peptidoglycan binding domain LL3_RS11825 PF13367 PrsW family intramembrane metalloprotease LL3_RS11835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LL3_RS11835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LL3_RS11840 PF05389 Negative regulator of genetic competence (MecA) LL3_RS11845 PF00149 Calcineurin-like phosphoesterase LL3_RS11850 PF10864 Protein of unknown function (DUF2663) LL3_RS11855 PF01476 LysM domain LL3_RS11860 PF02517 CPBP intramembrane metalloprotease LL3_RS11865 PF00271 Helicase conserved C-terminal domain LL3_RS11865 PF00270 DEAD/DEAH box helicase LL3_RS11870 PF14493 Helix-turn-helix domain LL3_RS11880 PF12822 ECF transporter, substrate-specific component LL3_RS11885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL3_RS11885 PF01842 ACT domain LL3_RS11885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL3_RS11895 PF04542 Sigma-70 region 2 LL3_RS11895 PF08281 Sigma-70, region 4 LL3_RS11900 PF00989 PAS fold LL3_RS11900 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS11900 PF18698 Histidine kinase sensor domain LL3_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS11900 PF00672 HAMP domain LL3_RS11905 PF00072 Response regulator receiver domain LL3_RS11905 PF00486 Transcriptional regulatory protein, C terminal LL3_RS11910 PF01578 Cytochrome C assembly protein LL3_RS11915 PF05140 ResB-like family LL3_RS11920 PF00578 AhpC/TSA family LL3_RS11925 PF00849 RNA pseudouridylate synthase LL3_RS11925 PF01479 S4 domain LL3_RS11930 PF07670 Nucleoside recognition LL3_RS11935 PF07670 Nucleoside recognition LL3_RS11940 PF07943 Penicillin-binding protein 5, C-terminal domain LL3_RS11940 PF00768 D-alanyl-D-alanine carboxypeptidase LL3_RS11945 PF13047 Protein of unknown function (DUF3907) LL3_RS11950 PF04079 Segregation and condensation complex subunit ScpB LL3_RS11955 PF02616 Segregation and condensation protein ScpA LL3_RS11960 PF03745 Domain of unknown function (DUF309) LL3_RS11965 PF00583 Acetyltransferase (GNAT) family LL3_RS11970 PF00885 6,7-dimethyl-8-ribityllumazine synthase LL3_RS11975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LL3_RS11975 PF00925 GTP cyclohydrolase II LL3_RS11980 PF00677 Lumazine binding domain LL3_RS11985 PF01872 RibD C-terminal domain LL3_RS11985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LL3_RS11995 PF10502 Signal peptidase, peptidase S26 LL3_RS12005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LL3_RS12010 PF06207 Protein of unknown function (DUF1002) LL3_RS12015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LL3_RS12015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LL3_RS12020 PF03323 Bacillus/Clostridium GerA spore germination protein LL3_RS12025 PF14097 Stage V sporulation protein AE1 LL3_RS12030 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS12035 PF07451 Stage V sporulation protein AD (SpoVAD) LL3_RS12040 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS12045 PF13782 Stage V sporulation protein AB LL3_RS12050 PF12164 Stage V sporulation protein AA LL3_RS12055 PF04542 Sigma-70 region 2 LL3_RS12055 PF04545 Sigma-70, region 4 LL3_RS12055 PF04539 Sigma-70 region 3 LL3_RS12060 PF13581 Histidine kinase-like ATPase domain LL3_RS12065 PF01740 STAS domain LL3_RS12070 PF00768 D-alanyl-D-alanine carboxypeptidase LL3_RS12070 PF07943 Penicillin-binding protein 5, C-terminal domain LL3_RS12075 PF01048 Phosphorylase superfamily LL3_RS12080 PF01676 Metalloenzyme superfamily LL3_RS12085 PF02899 Phage integrase, N-terminal SAM-like domain LL3_RS12085 PF00589 Phage integrase family LL3_RS12090 PF14004 Protein of unknown function (DUF4227) LL3_RS12095 PF01475 Ferric uptake regulator family LL3_RS12100 PF01944 Stage II sporulation protein M LL3_RS12115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL3_RS12115 PF03949 Malic enzyme, NAD binding domain LL3_RS12115 PF00390 Malic enzyme, N-terminal domain LL3_RS12120 PF03553 Na+/H+ antiporter family LL3_RS12125 PF10415 Fumarase C C-terminus LL3_RS12125 PF00206 Lyase LL3_RS12130 PF00710 Asparaginase, N-terminal LL3_RS12130 PF17763 Glutaminase/Asparaginase C-terminal domain LL3_RS12135 PF01381 Helix-turn-helix LL3_RS12145 PF00293 NUDIX domain LL3_RS12150 PF13072 Mother cell inhibitor of FtsZ LL3_RS12155 PF00248 Aldo/keto reductase family LL3_RS12160 PF13025 Protein of unknown function (DUF3886) LL3_RS12165 PF12146 Serine aminopeptidase, S33 LL3_RS12170 PF10827 Protein of unknown function (DUF2552) LL3_RS12175 PF01521 Iron-sulphur cluster biosynthesis LL3_RS12180 PF13673 Acetyltransferase (GNAT) domain LL3_RS12180 PF04229 GrpB protein LL3_RS12185 PF00583 Acetyltransferase (GNAT) family LL3_RS12190 PF00817 impB/mucB/samB family LL3_RS12190 PF11799 impB/mucB/samB family C-terminal domain LL3_RS12195 PF08863 YolD-like protein LL3_RS12200 PF14164 YqzH-like protein LL3_RS12205 PF01594 AI-2E family transporter LL3_RS12210 PF00485 Phosphoribulokinase / Uridine kinase family LL3_RS12215 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS12220 PF00106 short chain dehydrogenase LL3_RS12225 PF00753 Metallo-beta-lactamase superfamily LL3_RS12230 PF03807 NADP oxidoreductase coenzyme F420-dependent LL3_RS12230 PF14748 Pyrroline-5-carboxylate reductase dimerisation LL3_RS12240 PF03466 LysR substrate binding domain LL3_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS12250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LL3_RS12255 PF12146 Serine aminopeptidase, S33 LL3_RS12260 PF00471 Ribosomal protein L33 LL3_RS12265 PF12706 Beta-lactamase superfamily domain LL3_RS12270 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LL3_RS12270 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LL3_RS12275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LL3_RS12275 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LL3_RS12280 PF00817 impB/mucB/samB family LL3_RS12280 PF11799 impB/mucB/samB family C-terminal domain LL3_RS12280 PF11798 IMS family HHH motif LL3_RS12290 PF02096 60Kd inner membrane protein LL3_RS12295 PF07687 Peptidase dimerisation domain LL3_RS12295 PF01546 Peptidase family M20/M25/M40 LL3_RS12300 PF01039 Carboxyl transferase domain LL3_RS12310 PF03734 L,D-transpeptidase catalytic domain LL3_RS12315 PF06081 Aromatic acid exporter family member 1 LL3_RS12315 PF11728 Putative aromatic acid exporter C-terminal domain LL3_RS12320 PF00005 ABC transporter LL3_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS12330 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL3_RS12335 PF06491 Disulphide isomerase LL3_RS12340 PF00781 Diacylglycerol kinase catalytic domain LL3_RS12345 PF00364 Biotin-requiring enzyme LL3_RS12345 PF02817 e3 binding domain LL3_RS12345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LL3_RS12350 PF02779 Transketolase, pyrimidine binding domain LL3_RS12350 PF02780 Transketolase, C-terminal domain LL3_RS12355 PF00676 Dehydrogenase E1 component LL3_RS12360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS12360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LL3_RS12365 PF00871 Acetokinase family LL3_RS12370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LL3_RS12370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LL3_RS12375 PF01515 Phosphate acetyl/butaryl transferase LL3_RS12380 PF00158 Sigma-54 interaction domain LL3_RS12380 PF00989 PAS fold LL3_RS12380 PF02954 Bacterial regulatory protein, Fis family LL3_RS12385 PF11118 Protein of unknown function (DUF2627) LL3_RS12395 PF03972 MmgE/PrpD family LL3_RS12400 PF00285 Citrate synthase, C-terminal domain LL3_RS12405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL3_RS12405 PF02770 Acyl-CoA dehydrogenase, middle domain LL3_RS12405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL3_RS12410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL3_RS12410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL3_RS12415 PF00108 Thiolase, N-terminal domain LL3_RS12415 PF02803 Thiolase, C-terminal domain LL3_RS12420 PF03009 Glycerophosphoryl diester phosphodiesterase family LL3_RS12425 PF01520 N-acetylmuramoyl-L-alanine amidase LL3_RS12445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LL3_RS12450 PF10676 Spore germination protein gerPA/gerPF LL3_RS12455 PF10676 Spore germination protein gerPA/gerPF LL3_RS12460 PF00842 Alanine racemase, C-terminal domain LL3_RS12460 PF01168 Alanine racemase, N-terminal domain LL3_RS12465 PF08769 Sporulation initiation factor Spo0A C terminal LL3_RS12465 PF00072 Response regulator receiver domain LL3_RS12470 PF05580 SpoIVB peptidase S55 LL3_RS12470 PF17820 PDZ domain LL3_RS12475 PF13476 AAA domain LL3_RS12480 PF01316 Arginine repressor, DNA binding domain LL3_RS12480 PF02863 Arginine repressor, C-terminal domain LL3_RS12485 PF01728 FtsJ-like methyltransferase LL3_RS12485 PF01479 S4 domain LL3_RS12490 PF02779 Transketolase, pyrimidine binding domain LL3_RS12490 PF02780 Transketolase, C-terminal domain LL3_RS12490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LL3_RS12495 PF00348 Polyprenyl synthetase LL3_RS12500 PF02609 Exonuclease VII small subunit LL3_RS12505 PF02601 Exonuclease VII, large subunit LL3_RS12505 PF13742 OB-fold nucleic acid binding domain LL3_RS12510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LL3_RS12510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LL3_RS12515 PF01029 NusB family LL3_RS12520 PF03780 Asp23 family, cell envelope-related function LL3_RS12525 PF02785 Biotin carboxylase C-terminal domain LL3_RS12525 PF00289 Biotin carboxylase, N-terminal domain LL3_RS12525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LL3_RS12530 PF00364 Biotin-requiring enzyme LL3_RS12535 PF12685 SpoIIIAH-like protein LL3_RS12545 PF09581 Stage III sporulation protein AF (Spore_III_AF) LL3_RS12550 PF09546 Stage III sporulation protein AE (spore_III_AE) LL3_RS12555 PF06686 Stage III sporulation protein AC/AD protein family LL3_RS12560 PF06686 Stage III sporulation protein AC/AD protein family LL3_RS12565 PF09548 Stage III sporulation protein AB (spore_III_AB) LL3_RS12575 PF10942 Protein of unknown function (DUF2619) LL3_RS12580 PF01132 Elongation factor P (EF-P) OB domain LL3_RS12580 PF08207 Elongation factor P (EF-P) KOW-like domain LL3_RS12580 PF09285 Elongation factor P, C-terminal LL3_RS12585 PF00557 Metallopeptidase family M24 LL3_RS12585 PF01321 Creatinase/Prolidase N-terminal domain LL3_RS12590 PF11085 Conserved membrane protein YqhR LL3_RS12595 PF07136 Protein of unknown function (DUF1385) LL3_RS12605 PF01734 Patatin-like phospholipase LL3_RS12610 PF02742 Iron dependent repressor, metal binding and dimerisation domain LL3_RS12610 PF01325 Iron dependent repressor, N-terminal DNA binding domain LL3_RS12615 PF03099 Biotin/lipoate A/B protein ligase family LL3_RS12620 PF00581 Rhodanese-like domain LL3_RS12625 PF02347 Glycine cleavage system P-protein LL3_RS12630 PF02347 Glycine cleavage system P-protein LL3_RS12635 PF01571 Aminomethyltransferase folate-binding domain LL3_RS12635 PF08669 Glycine cleavage T-protein C-terminal barrel domain LL3_RS12640 PF00271 Helicase conserved C-terminal domain LL3_RS12640 PF00176 SNF2 family N-terminal domain LL3_RS12645 PF11079 Bacterial protein YqhG of unknown function LL3_RS12650 PF08671 Anti-repressor SinI LL3_RS12655 PF01381 Helix-turn-helix LL3_RS12655 PF08671 Anti-repressor SinI LL3_RS12660 PF12389 Camelysin metallo-endopeptidase LL3_RS12675 PF13028 Protein of unknown function (DUF3889) LL3_RS12680 PF14038 YqzE-like protein LL3_RS12685 PF14173 ComG operon protein 7 LL3_RS12690 PF15980 Putative Competence protein ComGF LL3_RS12700 PF07963 Prokaryotic N-terminal methylation motif LL3_RS12705 PF07963 Prokaryotic N-terminal methylation motif LL3_RS12710 PF00482 Type II secretion system (T2SS), protein F LL3_RS12715 PF00437 Type II/IV secretion system protein LL3_RS12720 PF01544 CorA-like Mg2+ transporter protein LL3_RS12725 PF01595 Cyclin M transmembrane N-terminal domain LL3_RS12725 PF00571 CBS domain LL3_RS12725 PF03471 Transporter associated domain LL3_RS12730 PF01740 STAS domain LL3_RS12730 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LL3_RS12740 PF03960 ArsC family LL3_RS12745 PF11117 Protein of unknown function (DUF2626) LL3_RS12750 PF00753 Metallo-beta-lactamase superfamily LL3_RS12760 PF01910 Thiamine-binding protein LL3_RS12770 PF00246 Zinc carboxypeptidase LL3_RS12775 PF00480 ROK family LL3_RS12780 PF06014 Bacterial protein of unknown function (DUF910) LL3_RS12785 PF03553 Na+/H+ antiporter family LL3_RS12790 PF01812 5-formyltetrahydrofolate cyclo-ligase family LL3_RS12805 PF00005 ABC transporter LL3_RS12810 PF00005 ABC transporter LL3_RS12815 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS12825 PF12849 PBP superfamily domain LL3_RS12830 PF00905 Penicillin binding protein transpeptidase domain LL3_RS12830 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS12835 PF07690 Major Facilitator Superfamily LL3_RS12840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LL3_RS12840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LL3_RS12845 PF04306 Protein of unknown function (DUF456) LL3_RS12850 PF06691 Protein of unknown function (DUF1189) LL3_RS12860 PF04551 GcpE protein LL3_RS12875 PF01475 Ferric uptake regulator family LL3_RS12880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS12880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS12885 PF11116 Protein of unknown function (DUF2624) LL3_RS12890 PF01261 Xylose isomerase-like TIM barrel LL3_RS12895 PF00270 DEAD/DEAH box helicase LL3_RS12895 PF00271 Helicase conserved C-terminal domain LL3_RS12900 PF14181 YqfQ-like protein LL3_RS12905 PF02401 LytB protein LL3_RS12910 PF01784 NIF3 (NGG1p interacting factor 3) LL3_RS12915 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LL3_RS12920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LL3_RS12925 PF00140 Sigma-70 factor, region 1.2 LL3_RS12925 PF04545 Sigma-70, region 4 LL3_RS12925 PF03979 Sigma-70 factor, region 1.1 LL3_RS12925 PF04539 Sigma-70 region 3 LL3_RS12925 PF04542 Sigma-70 region 2 LL3_RS12930 PF01807 CHC2 zinc finger LL3_RS12930 PF10410 DnaB-helicase binding domain of primase LL3_RS12930 PF08275 DNA primase catalytic core, N-terminal domain LL3_RS12935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LL3_RS12940 PF03618 Kinase/pyrophosphorylase LL3_RS12945 PF00571 CBS domain LL3_RS12945 PF08279 HTH domain LL3_RS12950 PF02092 Glycyl-tRNA synthetase beta subunit LL3_RS12955 PF02091 Glycyl-tRNA synthetase alpha subunit LL3_RS12960 PF02565 Recombination protein O C terminal LL3_RS12960 PF11967 Recombination protein O N terminal LL3_RS12965 PF01926 50S ribosome-binding GTPase LL3_RS12965 PF07650 KH domain LL3_RS12970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LL3_RS12975 PF01219 Prokaryotic diacylglycerol kinase LL3_RS12980 PF02130 Uncharacterized protein family UPF0054 LL3_RS12985 PF07697 7TM-HD extracellular LL3_RS12985 PF07698 7TM receptor with intracellular HD hydrolase LL3_RS12985 PF01966 HD domain LL3_RS12990 PF02562 PhoH-like protein LL3_RS12995 PF06898 Putative stage IV sporulation protein YqfD LL3_RS13000 PF07873 YabP family LL3_RS13010 PF12127 SigmaW regulon antibacterial LL3_RS13015 PF01972 Serine dehydrogenase proteinase LL3_RS13015 PF01957 NfeD-like C-terminal, partner-binding LL3_RS13020 PF09424 Yqey-like protein LL3_RS13025 PF01165 Ribosomal protein S21 LL3_RS13030 PF02690 Na+/Pi-cotransporter LL3_RS13035 PF00919 Uncharacterized protein family UPF0004 LL3_RS13035 PF01938 TRAM domain LL3_RS13035 PF04055 Radical SAM superfamily LL3_RS13040 PF04452 RNA methyltransferase LL3_RS13050 PF00684 DnaJ central domain LL3_RS13050 PF01556 DnaJ C terminal domain LL3_RS13050 PF00226 DnaJ domain LL3_RS13055 PF00012 Hsp70 protein LL3_RS13060 PF01025 GrpE LL3_RS13065 PF01628 HrcA protein C terminal domain LL3_RS13070 PF04055 Radical SAM superfamily LL3_RS13070 PF06969 HemN C-terminal domain LL3_RS13075 PF06421 GTP-binding protein LepA C-terminus LL3_RS13075 PF03144 Elongation factor Tu domain 2 LL3_RS13075 PF00009 Elongation factor Tu GTP binding domain LL3_RS13075 PF00679 Elongation factor G C-terminus LL3_RS13080 PF12438 Protein of unknown function (DUF3679) LL3_RS13085 PF07454 Stage II sporulation protein P (SpoIIP) LL3_RS13090 PF03418 Germination protease LL3_RS13095 PF01649 Ribosomal protein S20 LL3_RS13100 PF06144 DNA polymerase III, delta subunit LL3_RS13115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LL3_RS13120 PF10531 SLBB domain LL3_RS13125 PF14748 Pyrroline-5-carboxylate reductase dimerisation LL3_RS13125 PF03807 NADP oxidoreductase coenzyme F420-dependent LL3_RS13130 PF13649 Methyltransferase domain LL3_RS13140 PF01966 HD domain LL3_RS13145 PF01467 Cytidylyltransferase-like LL3_RS13150 PF01985 CRS1 / YhbY (CRM) domain LL3_RS13155 PF01488 Shikimate / quinate 5-dehydrogenase LL3_RS13155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LL3_RS13155 PF08501 Shikimate dehydrogenase substrate binding domain LL3_RS13160 PF01926 50S ribosome-binding GTPase LL3_RS13170 PF08970 Sporulation inhibitor A LL3_RS13175 PF00657 GDSL-like Lipase/Acylhydrolase LL3_RS13180 PF01522 Polysaccharide deacetylase LL3_RS13185 PF01471 Putative peptidoglycan binding domain LL3_RS13185 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS13190 PF09335 SNARE associated Golgi protein LL3_RS13205 PF04545 Sigma-70, region 4 LL3_RS13205 PF04542 Sigma-70 region 2 LL3_RS13220 PF04542 Sigma-70 region 2 LL3_RS13220 PF04545 Sigma-70, region 4 LL3_RS13235 PF07690 Major Facilitator Superfamily LL3_RS13240 PF05163 DinB family LL3_RS13255 PF01380 SIS domain LL3_RS13255 PF01418 Helix-turn-helix domain, rpiR family LL3_RS13260 PF01238 Phosphomannose isomerase type I LL3_RS13265 PF02378 Phosphotransferase system, EIIC LL3_RS13265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS13265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL3_RS13270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LL3_RS13270 PF08279 HTH domain LL3_RS13270 PF00874 PRD domain LL3_RS13270 PF05043 Mga helix-turn-helix domain LL3_RS13275 PF12706 Beta-lactamase superfamily domain LL3_RS13280 PF04073 Aminoacyl-tRNA editing domain LL3_RS13285 PF03466 LysR substrate binding domain LL3_RS13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS13290 PF07690 Major Facilitator Superfamily LL3_RS13295 PF00175 Oxidoreductase NAD-binding domain LL3_RS13295 PF00067 Cytochrome P450 LL3_RS13295 PF00667 FAD binding domain LL3_RS13295 PF00258 Flavodoxin LL3_RS13300 PF16295 Tetracyclin repressor-like, C-terminal domain LL3_RS13300 PF00440 Bacterial regulatory proteins, tetR family LL3_RS13305 PF08241 Methyltransferase domain LL3_RS13310 PF01226 Formate/nitrite transporter LL3_RS13315 PF10057 Uncharacterized conserved protein (DUF2294) LL3_RS13320 PF00037 4Fe-4S binding domain LL3_RS13320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL3_RS13320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LL3_RS13320 PF01568 Molydopterin dinucleotide binding domain LL3_RS13320 PF00384 Molybdopterin oxidoreductase LL3_RS13325 PF07849 Protein of unknown function (DUF1641) LL3_RS13330 PF14143 YrhC-like protein LL3_RS13335 PF01053 Cys/Met metabolism PLP-dependent enzyme LL3_RS13340 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS13345 PF01048 Phosphorylase superfamily LL3_RS13350 PF13649 Methyltransferase domain LL3_RS13355 PF10750 Protein of unknown function (DUF2536) LL3_RS13360 PF07423 Domain of unknown function (DUF1510) LL3_RS13365 PF00905 Penicillin binding protein transpeptidase domain LL3_RS13365 PF03717 Penicillin-binding Protein dimerisation domain LL3_RS13370 PF03449 Transcription elongation factor, N-terminal LL3_RS13370 PF01272 Transcription elongation factor, GreA/GreB, C-term LL3_RS13375 PF00485 Phosphoribulokinase / Uridine kinase family LL3_RS13380 PF01136 Peptidase family U32 LL3_RS13380 PF16325 Peptidase family U32 C-terminal domain LL3_RS13385 PF01136 Peptidase family U32 LL3_RS13390 PF01596 O-methyltransferase LL3_RS13395 PF02618 YceG-like family LL3_RS13400 PF06949 Protein of unknown function (DUF1292) LL3_RS13405 PF03652 Holliday junction resolvase LL3_RS13410 PF06135 IreB regulatory phosphoprotein LL3_RS13415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LL3_RS13415 PF01411 tRNA synthetases class II (A) LL3_RS13415 PF02272 DHHA1 domain LL3_RS13420 PF01594 AI-2E family transporter LL3_RS13425 PF00005 ABC transporter LL3_RS13430 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL3_RS13435 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS13440 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS13450 PF05239 PRC-barrel domain LL3_RS13455 PF13538 UvrD-like helicase C-terminal domain LL3_RS13455 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LL3_RS13455 PF14490 Helix-hairpin-helix containing domain LL3_RS13460 PF13181 Tetratricopeptide repeat LL3_RS13460 PF07719 Tetratricopeptide repeat LL3_RS13470 PF00266 Aminotransferase class-V LL3_RS13475 PF02082 Transcriptional regulator LL3_RS13480 PF16193 AAA C-terminal domain LL3_RS13480 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL3_RS13480 PF12002 MgsA AAA+ ATPase C terminal LL3_RS13485 PF00899 ThiF family LL3_RS13490 PF01336 OB-fold nucleic acid binding domain LL3_RS13490 PF00152 tRNA synthetases class II (D, K and N) LL3_RS13490 PF02938 GAD domain LL3_RS13495 PF03129 Anticodon binding domain LL3_RS13495 PF13393 Histidyl-tRNA synthetase LL3_RS13505 PF01520 N-acetylmuramoyl-L-alanine amidase LL3_RS13505 PF08239 Bacterial SH3 domain LL3_RS13510 PF02580 D-Tyr-tRNA(Tyr) deacylase LL3_RS13515 PF02824 TGS domain LL3_RS13515 PF04607 Region found in RelA / SpoT proteins LL3_RS13515 PF13291 ACT domain LL3_RS13520 PF00156 Phosphoribosyl transferase domain LL3_RS13525 PF02272 DHHA1 domain LL3_RS13525 PF01368 DHH family LL3_RS13525 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LL3_RS13525 PF17768 RecJ OB domain LL3_RS13530 PF06305 Lipopolysaccharide assembly protein A domain LL3_RS13535 PF02080 TrkA-C domain LL3_RS13540 PF02355 Protein export membrane protein LL3_RS13540 PF07549 SecD/SecF GG Motif LL3_RS13545 PF13797 Post-transcriptional regulator LL3_RS13550 PF01943 Polysaccharide biosynthesis protein LL3_RS13550 PF14667 Polysaccharide biosynthesis C-terminal domain LL3_RS13555 PF04239 Protein of unknown function (DUF421) LL3_RS13560 PF12670 Protein of unknown function (DUF3792) LL3_RS13565 PF02699 Preprotein translocase subunit LL3_RS13570 PF01702 Queuine tRNA-ribosyltransferase LL3_RS13575 PF02547 Queuosine biosynthesis protein LL3_RS13580 PF11146 Protein of unknown function (DUF2905) LL3_RS13585 PF05496 Holliday junction DNA helicase RuvB P-loop domain LL3_RS13585 PF05491 RuvB C-terminal winged helix domain LL3_RS13585 PF17864 RuvB AAA lid domain LL3_RS13590 PF07499 RuvA, C-terminal domain LL3_RS13590 PF01330 RuvA N terminal domain LL3_RS13595 PF08977 Bypass of Forespore C, N terminal LL3_RS13595 PF08955 BofC C-terminal domain LL3_RS13600 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LL3_RS13605 PF01476 LysM domain LL3_RS13610 PF02445 Quinolinate synthetase A protein LL3_RS13615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LL3_RS13615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LL3_RS13620 PF00890 FAD binding domain LL3_RS13620 PF02910 Fumarate reductase flavoprotein C-term LL3_RS13625 PF00266 Aminotransferase class-V LL3_RS13630 PF02829 3H domain LL3_RS13630 PF08279 HTH domain LL3_RS13635 PF01842 ACT domain LL3_RS13635 PF00800 Prephenate dehydratase LL3_RS13640 PF01842 ACT domain LL3_RS13645 PF09269 Domain of unknown function (DUF1967) LL3_RS13645 PF01018 GTP1/OBG LL3_RS13645 PF01926 50S ribosome-binding GTPase LL3_RS13650 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL3_RS13650 PF14682 Sporulation initiation phospho-transferase B, C-terminal LL3_RS13655 PF01016 Ribosomal L27 protein LL3_RS13660 PF04327 Cysteine protease Prp LL3_RS13665 PF00829 Ribosomal prokaryotic L21 protein LL3_RS13670 PF02163 Peptidase family M50 LL3_RS13675 PF01551 Peptidase family M23 LL3_RS13680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LL3_RS13685 PF03775 Septum formation inhibitor MinC, C-terminal domain LL3_RS13690 PF04093 rod shape-determining protein MreD LL3_RS13695 PF04085 rod shape-determining protein MreC LL3_RS13705 PF04002 RadC-like JAB domain LL3_RS13710 PF02545 Maf-like protein LL3_RS13715 PF05036 Sporulation related domain LL3_RS13720 PF06750 Bacterial Peptidase A24 N-terminal domain LL3_RS13720 PF01478 Type IV leader peptidase family LL3_RS13725 PF08245 Mur ligase middle domain LL3_RS13725 PF02875 Mur ligase family, glutamate ligase domain LL3_RS13730 PF00133 tRNA synthetases class I (I, L, M and V) LL3_RS13730 PF08264 Anticodon-binding domain of tRNA LL3_RS13730 PF10458 Valyl tRNA synthetase tRNA binding arm LL3_RS13745 PF01476 LysM domain LL3_RS13750 PF00202 Aminotransferase class-III LL3_RS13755 PF00490 Delta-aminolevulinic acid dehydratase LL3_RS13760 PF02602 Uroporphyrinogen-III synthase HemD LL3_RS13765 PF03900 Porphobilinogen deaminase, C-terminal domain LL3_RS13765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LL3_RS13770 PF01578 Cytochrome C assembly protein LL3_RS13775 PF01488 Shikimate / quinate 5-dehydrogenase LL3_RS13775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LL3_RS13775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LL3_RS13785 PF01926 50S ribosome-binding GTPase LL3_RS13790 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS13790 PF02190 ATP-dependent protease La (LON) substrate-binding domain LL3_RS13790 PF05362 Lon protease (S16) C-terminal proteolytic domain LL3_RS13795 PF05362 Lon protease (S16) C-terminal proteolytic domain LL3_RS13795 PF00004 ATPase family associated with various cellular activities (AAA) LL3_RS13800 PF07724 AAA domain (Cdc48 subfamily) LL3_RS13800 PF10431 C-terminal, D2-small domain, of ClpB protein LL3_RS13800 PF06689 ClpX C4-type zinc finger LL3_RS13805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LL3_RS13805 PF05697 Bacterial trigger factor protein (TF) LL3_RS13805 PF05698 Bacterial trigger factor protein (TF) C-terminus LL3_RS13815 PF00694 Aconitase C-terminal domain LL3_RS13820 PF00330 Aconitase family (aconitate hydratase) LL3_RS13825 PF00180 Isocitrate/isopropylmalate dehydrogenase LL3_RS13830 PF00682 HMGL-like LL3_RS13830 PF08502 LeuA allosteric (dimerisation) domain LL3_RS13835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LL3_RS13835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LL3_RS13840 PF10369 Small subunit of acetolactate synthase LL3_RS13840 PF01842 ACT domain LL3_RS13845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL3_RS13845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL3_RS13845 PF00205 Thiamine pyrophosphate enzyme, central domain LL3_RS13870 PF12850 Calcineurin-like phosphoesterase superfamily domain LL3_RS13875 PF01725 Ham1 family LL3_RS13880 PF03725 3' exoribonuclease family, domain 2 LL3_RS13880 PF01138 3' exoribonuclease family, domain 1 LL3_RS13885 PF10646 Sporulation and spore germination LL3_RS13890 PF01177 Asp/Glu/Hydantoin racemase LL3_RS13895 PF01047 MarR family LL3_RS13900 PF00196 Bacterial regulatory proteins, luxR family LL3_RS13905 PF03061 Thioesterase superfamily LL3_RS13910 PF13085 2Fe-2S iron-sulfur cluster binding domain LL3_RS13910 PF13183 4Fe-4S dicluster domain LL3_RS13915 PF00890 FAD binding domain LL3_RS13915 PF02910 Fumarate reductase flavoprotein C-term LL3_RS13920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LL3_RS13925 PF10702 Protein of unknown function (DUF2507) LL3_RS13930 PF01842 ACT domain LL3_RS13930 PF13840 ACT domain LL3_RS13930 PF00696 Amino acid kinase family LL3_RS13935 PF01541 GIY-YIG catalytic domain LL3_RS13935 PF02151 UvrB/uvrC motif LL3_RS13935 PF08459 UvrC Helix-hairpin-helix N-terminal LL3_RS13940 PF00085 Thioredoxin LL3_RS13945 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LL3_RS13950 PF00766 Electron transfer flavoprotein FAD-binding domain LL3_RS13950 PF01012 Electron transfer flavoprotein domain LL3_RS13955 PF01012 Electron transfer flavoprotein domain LL3_RS13960 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS13965 PF08359 YsiA-like protein, C-terminal region LL3_RS13965 PF00440 Bacterial regulatory proteins, tetR family LL3_RS13970 PF00501 AMP-binding enzyme LL3_RS13970 PF13193 AMP-binding enzyme C-terminal domain LL3_RS13975 PF10924 Protein of unknown function (DUF2711) LL3_RS13980 PF03994 Domain of Unknown Function (DUF350) LL3_RS13985 PF00488 MutS domain V LL3_RS13985 PF01713 Smr domain LL3_RS13990 PF14791 DNA polymerase beta thumb LL3_RS13990 PF14716 Helix-hairpin-helix domain LL3_RS13990 PF02811 PHP domain LL3_RS13995 PF02674 Colicin V production protein LL3_RS14000 PF05164 Cell division protein ZapA LL3_RS14005 PF01351 Ribonuclease HII LL3_RS14005 PF11858 Domain of unknown function (DUF3378) LL3_RS14010 PF03484 tRNA synthetase B5 domain LL3_RS14010 PF03483 B3/4 domain LL3_RS14010 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LL3_RS14010 PF01588 Putative tRNA binding domain LL3_RS14010 PF03147 Ferredoxin-fold anticodon binding domain LL3_RS14015 PF01409 tRNA synthetases class II core domain (F) LL3_RS14015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LL3_RS14020 PF08032 RNA 2'-O ribose methyltransferase substrate binding LL3_RS14020 PF00588 SpoU rRNA Methylase family LL3_RS14025 PF14098 Small, acid-soluble spore protein I LL3_RS14030 PF13556 PucR C-terminal helix-turn-helix domain LL3_RS14030 PF17853 GGDEF-like domain LL3_RS14030 PF05651 Putative sugar diacid recognition LL3_RS14035 PF02913 FAD linked oxidases, C-terminal domain LL3_RS14035 PF01565 FAD binding domain LL3_RS14040 PF02754 Cysteine-rich domain LL3_RS14040 PF13183 4Fe-4S dicluster domain LL3_RS14045 PF13722 5TM C-terminal transporter carbon starvation CstA LL3_RS14045 PF02554 Carbon starvation protein CstA LL3_RS14050 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LL3_RS14055 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS14060 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS14065 PF01547 Bacterial extracellular solute-binding protein LL3_RS14070 PF13685 Iron-containing alcohol dehydrogenase LL3_RS14075 PF13344 Haloacid dehalogenase-like hydrolase LL3_RS14080 PF00596 Class II Aldolase and Adducin N-terminal domain LL3_RS14085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL3_RS14085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL3_RS14090 PF02610 L-arabinose isomerase LL3_RS14090 PF11762 L-arabinose isomerase C-terminal domain LL3_RS14095 PF04616 Glycosyl hydrolases family 43 LL3_RS14100 PF05343 M42 glutamyl aminopeptidase LL3_RS14110 PF06961 Protein of unknown function (DUF1294) LL3_RS14115 PF00453 Ribosomal protein L20 LL3_RS14120 PF01632 Ribosomal protein L35 LL3_RS14125 PF05198 Translation initiation factor IF-3, N-terminal domain LL3_RS14125 PF00707 Translation initiation factor IF-3, C-terminal domain LL3_RS14130 PF04172 LrgB-like family LL3_RS14135 PF03788 LrgA family LL3_RS14140 PF04397 LytTr DNA-binding domain LL3_RS14140 PF00072 Response regulator receiver domain LL3_RS14145 PF07694 5TMR of 5TMR-LYT LL3_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS14145 PF06580 Histidine kinase LL3_RS14150 PF13419 Haloacid dehalogenase-like hydrolase LL3_RS14155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LL3_RS14155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LL3_RS14155 PF03129 Anticodon binding domain LL3_RS14155 PF02824 TGS domain LL3_RS14160 PF08812 YtxC-like family LL3_RS14165 PF09335 SNARE associated Golgi protein LL3_RS14170 PF01695 IstB-like ATP binding protein LL3_RS14170 PF07319 Primosomal protein DnaI N-terminus LL3_RS14175 PF07261 Replication initiation and membrane attachment LL3_RS14180 PF03477 ATP cone domain LL3_RS14185 PF02675 S-adenosylmethionine decarboxylase LL3_RS14190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LL3_RS14190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LL3_RS14195 PF01638 HxlR-like helix-turn-helix LL3_RS14200 PF07690 Major Facilitator Superfamily LL3_RS14205 PF00248 Aldo/keto reductase family LL3_RS14210 PF01121 Dephospho-CoA kinase LL3_RS14215 PF02659 Putative manganese efflux pump LL3_RS14220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LL3_RS14220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LL3_RS14220 PF06827 Zinc finger found in FPG and IleRS LL3_RS14225 PF01367 5'-3' exonuclease, C-terminal SAM fold LL3_RS14225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL3_RS14225 PF00476 DNA polymerase family A LL3_RS14230 PF16736 Single Cache-like LL3_RS14230 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS14230 PF00989 PAS fold LL3_RS14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS14235 PF00072 Response regulator receiver domain LL3_RS14235 PF00486 Transcriptional regulatory protein, C terminal LL3_RS14240 PF00056 lactate/malate dehydrogenase, NAD binding domain LL3_RS14240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LL3_RS14245 PF00180 Isocitrate/isopropylmalate dehydrogenase LL3_RS14250 PF00285 Citrate synthase, C-terminal domain LL3_RS14255 PF04284 Protein of unknown function (DUF441) LL3_RS14260 PF01594 AI-2E family transporter LL3_RS14265 PF04186 FxsA cytoplasmic membrane protein LL3_RS14270 PF02887 Pyruvate kinase, alpha/beta domain LL3_RS14270 PF00224 Pyruvate kinase, barrel domain LL3_RS14270 PF00391 PEP-utilising enzyme, mobile domain LL3_RS14275 PF00365 Phosphofructokinase LL3_RS14280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LL3_RS14285 PF01039 Carboxyl transferase domain LL3_RS14285 PF17848 Acetyl-coA carboxylase zinc finger domain LL3_RS14295 PF00390 Malic enzyme, N-terminal domain LL3_RS14295 PF03949 Malic enzyme, NAD binding domain LL3_RS14300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LL3_RS14300 PF14579 Helix-hairpin-helix motif LL3_RS14300 PF02811 PHP domain LL3_RS14300 PF01336 OB-fold nucleic acid binding domain LL3_RS14300 PF07733 Bacterial DNA polymerase III alpha NTPase domain LL3_RS14305 PF14034 Sporulation protein YtrH LL3_RS14320 PF01368 DHH family LL3_RS14320 PF02272 DHHA1 domain LL3_RS14325 PF14007 YtpI-like protein LL3_RS14330 PF00392 Bacterial regulatory proteins, gntR family LL3_RS14330 PF07085 DRTGG domain LL3_RS14330 PF03061 Thioesterase superfamily LL3_RS14330 PF00571 CBS domain LL3_RS14345 PF14698 Argininosuccinate lyase C-terminal LL3_RS14345 PF00206 Lyase LL3_RS14350 PF00764 Arginosuccinate synthase LL3_RS14355 PF00994 Probable molybdopterin binding domain LL3_RS14360 PF00871 Acetokinase family LL3_RS14365 PF02384 N-6 DNA Methylase LL3_RS14370 PF08534 Redoxin LL3_RS14375 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LL3_RS14380 PF11167 Protein of unknown function (DUF2953) LL3_RS14385 PF06271 RDD family LL3_RS14390 PF01343 Peptidase family S49 LL3_RS14395 PF01513 ATP-NAD kinase LL3_RS14400 PF07969 Amidohydrolase family LL3_RS14405 PF13193 AMP-binding enzyme C-terminal domain LL3_RS14405 PF00501 AMP-binding enzyme LL3_RS14410 PF00269 Small, acid-soluble spore proteins, alpha/beta type LL3_RS14415 PF02568 Thiamine biosynthesis protein (ThiI) LL3_RS14415 PF02926 THUMP domain LL3_RS14420 PF00266 Aminotransferase class-V LL3_RS14425 PF05525 Branched-chain amino acid transport protein LL3_RS14430 PF06160 Septation ring formation regulator, EzrA LL3_RS14435 PF02811 PHP domain LL3_RS14440 PF00440 Bacterial regulatory proteins, tetR family LL3_RS14445 PF13185 GAF domain LL3_RS14450 PF00990 Diguanylate cyclase, GGDEF domain LL3_RS14455 PF00163 Ribosomal protein S4/S9 N-terminal domain LL3_RS14455 PF01479 S4 domain LL3_RS14460 PF00970 Oxidoreductase FAD-binding domain LL3_RS14460 PF00175 Oxidoreductase NAD-binding domain LL3_RS14460 PF00042 Globin LL3_RS14470 PF01965 DJ-1/PfpI family LL3_RS14485 PF01545 Cation efflux family LL3_RS14485 PF16916 Dimerisation domain of Zinc Transporter LL3_RS14490 PF11495 Archaeal transcriptional regulator TrmB LL3_RS14490 PF01978 Sugar-specific transcriptional regulator TrmB LL3_RS14495 PF03591 AzlC protein LL3_RS14505 PF00579 tRNA synthetases class I (W and Y) LL3_RS14505 PF01479 S4 domain LL3_RS14510 PF13193 AMP-binding enzyme C-terminal domain LL3_RS14510 PF00501 AMP-binding enzyme LL3_RS14515 PF00583 Acetyltransferase (GNAT) family LL3_RS14520 PF00571 CBS domain LL3_RS14525 PF00850 Histone deacetylase domain LL3_RS14530 PF00691 OmpA family LL3_RS14530 PF13677 Membrane MotB of proton-channel complex MotA/MotB LL3_RS14535 PF01618 MotA/TolQ/ExbB proton channel family LL3_RS14540 PF00356 Bacterial regulatory proteins, lacI family LL3_RS14545 PF00793 DAHP synthetase I family LL3_RS14545 PF01817 Chorismate mutase type II LL3_RS14550 PF11009 Protein of unknown function (DUF2847) LL3_RS14555 PF12732 YtxH-like protein LL3_RS14560 PF06103 Bacterial protein of unknown function (DUF948) LL3_RS14565 PF02875 Mur ligase family, glutamate ligase domain LL3_RS14565 PF08245 Mur ligase middle domain LL3_RS14565 PF01225 Mur ligase family, catalytic domain LL3_RS14570 PF01580 FtsK/SpoIIIE family LL3_RS14570 PF09397 Ftsk gamma domain LL3_RS14570 PF17854 FtsK alpha domain LL3_RS14575 PF14794 Domain of unknown function (DUF4479) LL3_RS14575 PF01588 Putative tRNA binding domain LL3_RS14580 PF07285 Protein of unknown function (DUF1444) LL3_RS14585 PF00085 Thioredoxin LL3_RS14590 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LL3_RS14595 PF05343 M42 glutamyl aminopeptidase LL3_RS14600 PF03413 Peptidase propeptide and YPEB domain LL3_RS14605 PF03949 Malic enzyme, NAD binding domain LL3_RS14605 PF00390 Malic enzyme, N-terminal domain LL3_RS14610 PF00753 Metallo-beta-lactamase superfamily LL3_RS14615 PF02390 Putative methyltransferase LL3_RS14620 PF14165 YtzH-like protein LL3_RS14625 PF01636 Phosphotransferase enzyme family LL3_RS14630 PF00781 Diacylglycerol kinase catalytic domain LL3_RS14645 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS14650 PF01546 Peptidase family M20/M25/M40 LL3_RS14655 PF00860 Permease family LL3_RS14660 PF05975 Bacterial ABC transporter protein EcsB LL3_RS14665 PF00005 ABC transporter LL3_RS14670 PF08220 DeoR-like helix-turn-helix domain LL3_RS14675 PF01479 S4 domain LL3_RS14675 PF00849 RNA pseudouridylate synthase LL3_RS14680 PF01943 Polysaccharide biosynthesis protein LL3_RS14680 PF14667 Polysaccharide biosynthesis C-terminal domain LL3_RS14690 PF02028 BCCT, betaine/carnitine/choline family transporter LL3_RS14695 PF10957 Sporulation protein Cse60 LL3_RS14700 PF00356 Bacterial regulatory proteins, lacI family LL3_RS14705 PF01547 Bacterial extracellular solute-binding protein LL3_RS14710 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS14715 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS14720 PF02056 Family 4 glycosyl hydrolase LL3_RS14720 PF11975 Family 4 glycosyl hydrolase C-terminal domain LL3_RS14730 PF00581 Rhodanese-like domain LL3_RS14735 PF13603 Leucyl-tRNA synthetase, Domain 2 LL3_RS14735 PF08264 Anticodon-binding domain of tRNA LL3_RS14735 PF00133 tRNA synthetases class I (I, L, M and V) LL3_RS14735 PF09334 tRNA synthetases class I (M) LL3_RS14740 PF14074 Protein of unknown function (DUF4257) LL3_RS14745 PF01740 STAS domain LL3_RS14745 PF13426 PAS domain LL3_RS14750 PF07690 Major Facilitator Superfamily LL3_RS14755 PF09529 Integral membrane protein (intg_mem_TP0381) LL3_RS14760 PF02687 FtsX-like permease family LL3_RS14765 PF00005 ABC transporter LL3_RS14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS14775 PF00486 Transcriptional regulatory protein, C terminal LL3_RS14775 PF00072 Response regulator receiver domain LL3_RS14780 PF02687 FtsX-like permease family LL3_RS14780 PF12704 MacB-like periplasmic core domain LL3_RS14785 PF00005 ABC transporter LL3_RS14805 PF00005 ABC transporter LL3_RS14810 PF00392 Bacterial regulatory proteins, gntR family LL3_RS14820 PF10732 Protein of unknown function (DUF2524) LL3_RS14825 PF16199 Radical_SAM C-terminal domain LL3_RS14825 PF04055 Radical SAM superfamily LL3_RS14830 PF06962 Putative rRNA methylase LL3_RS14840 PF10776 Protein of unknown function (DUF2600) LL3_RS14845 PF12146 Serine aminopeptidase, S33 LL3_RS14850 PF00132 Bacterial transferase hexapeptide (six repeats) LL3_RS14855 PF00324 Amino acid permease LL3_RS14860 PF00733 Asparagine synthase LL3_RS14860 PF13537 Glutamine amidotransferase domain LL3_RS14865 PF02772 S-adenosylmethionine synthetase, central domain LL3_RS14865 PF02773 S-adenosylmethionine synthetase, C-terminal domain LL3_RS14865 PF00438 S-adenosylmethionine synthetase, N-terminal domain LL3_RS14870 PF01293 Phosphoenolpyruvate carboxykinase LL3_RS14875 PF10763 Protein of unknown function (DUF2584) LL3_RS14880 PF00326 Prolyl oligopeptidase family LL3_RS14890 PF00005 ABC transporter LL3_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS14900 PF00293 NUDIX domain LL3_RS14905 PF05105 Bacteriophage holin family LL3_RS14910 PF00210 Ferritin-like domain LL3_RS14920 PF13115 YtkA-like LL3_RS14925 PF02664 S-Ribosylhomocysteinase (LuxS) LL3_RS14930 PF01809 Putative membrane protein insertion efficiency factor LL3_RS14935 PF00484 Carbonic anhydrase LL3_RS14940 PF01197 Ribosomal protein L31 LL3_RS14945 PF01654 Cytochrome bd terminal oxidase subunit I LL3_RS14950 PF02322 Cytochrome bd terminal oxidase subunit II LL3_RS14955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LL3_RS14955 PF13378 Enolase C-terminal domain-like LL3_RS14960 PF13193 AMP-binding enzyme C-terminal domain LL3_RS14960 PF00501 AMP-binding enzyme LL3_RS14965 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS14970 PF00561 alpha/beta hydrolase fold LL3_RS14975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL3_RS14975 PF16582 Middle domain of thiamine pyrophosphate LL3_RS14975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL3_RS14980 PF00425 chorismate binding enzyme LL3_RS14985 PF01258 Prokaryotic dksA/traR C4-type zinc finger LL3_RS14990 PF03073 TspO/MBR family LL3_RS15115 PF09515 Thiamine transporter protein (Thia_YuaJ) LL3_RS15120 PF01145 SPFH domain / Band 7 family LL3_RS15120 PF15975 Flotillin LL3_RS15130 PF12867 DinB superfamily LL3_RS15140 PF00465 Iron-containing alcohol dehydrogenase LL3_RS15145 PF00171 Aldehyde dehydrogenase family LL3_RS15155 PF17735 Biofilm surface layer A LL3_RS15160 PF02080 TrkA-C domain LL3_RS15160 PF02254 TrkA-N domain LL3_RS15165 PF13457 GW (Gly-Tryp) dipeptide domain LL3_RS15165 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LL3_RS15170 PF00970 Oxidoreductase FAD-binding domain LL3_RS15170 PF00042 Globin LL3_RS15170 PF00175 Oxidoreductase NAD-binding domain LL3_RS15190 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS15190 PF13176 Tetratricopeptide repeat LL3_RS15205 PF02673 Bacitracin resistance protein BacA LL3_RS15210 PF01594 AI-2E family transporter LL3_RS15215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL3_RS15215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL3_RS15220 PF01965 DJ-1/PfpI family LL3_RS15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS15225 PF00672 HAMP domain LL3_RS15225 PF02743 Cache domain LL3_RS15230 PF00672 HAMP domain LL3_RS15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS15230 PF02743 Cache domain LL3_RS15235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS15235 PF02743 Cache domain LL3_RS15235 PF00672 HAMP domain LL3_RS15240 PF00672 HAMP domain LL3_RS15240 PF02743 Cache domain LL3_RS15240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LL3_RS15255 PF03060 Nitronate monooxygenase LL3_RS15260 PF00128 Alpha amylase, catalytic domain LL3_RS15260 PF16657 Maltogenic Amylase, C-terminal domain LL3_RS15265 PF00571 CBS domain LL3_RS15265 PF03471 Transporter associated domain LL3_RS15265 PF01595 Cyclin M transmembrane N-terminal domain LL3_RS15270 PF04298 Putative neutral zinc metallopeptidase LL3_RS15280 PF11458 Membrane-integrating protein Mistic LL3_RS15285 PF07885 Ion channel LL3_RS15285 PF02254 TrkA-N domain LL3_RS15290 PF08868 YugN-like family LL3_RS15300 PF00342 Phosphoglucose isomerase LL3_RS15305 PF00465 Iron-containing alcohol dehydrogenase LL3_RS15310 PF00465 Iron-containing alcohol dehydrogenase LL3_RS15315 PF04070 Domain of unknown function (DUF378) LL3_RS15320 PF00575 S1 RNA binding domain LL3_RS15325 PF00155 Aminotransferase class I and II LL3_RS15330 PF01037 Lrp/AsnC ligand binding domain LL3_RS15335 PF00561 alpha/beta hydrolase fold LL3_RS15335 PF08386 TAP-like protein LL3_RS15340 PF08958 Domain of unknown function (DUF1871) LL3_RS15345 PF00155 Aminotransferase class I and II LL3_RS15350 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS15355 PF08810 Kinase associated protein B LL3_RS15360 PF00929 Exonuclease LL3_RS15365 PF07690 Major Facilitator Superfamily LL3_RS15370 PF00912 Transglycosylase LL3_RS15370 PF00905 Penicillin binding protein transpeptidase domain LL3_RS15375 PF04134 Protein of unknown function, DUF393 LL3_RS15380 PF17328 Family of unknown function (DUF5366) LL3_RS15385 PF17203 Single cache domain 3 LL3_RS15385 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LL3_RS15385 PF00989 PAS fold LL3_RS15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS15390 PF00072 Response regulator receiver domain LL3_RS15395 PF02608 ABC transporter substrate-binding protein PnrA-like LL3_RS15400 PF00005 ABC transporter LL3_RS15405 PF02653 Branched-chain amino acid transport system / permease component LL3_RS15410 PF02653 Branched-chain amino acid transport system / permease component LL3_RS15420 PF00361 Proton-conducting membrane transporter LL3_RS15420 PF13244 Domain of unknown function (DUF4040) LL3_RS15420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LL3_RS15425 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LL3_RS15430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LL3_RS15435 PF00361 Proton-conducting membrane transporter LL3_RS15440 PF01899 Na+/H+ ion antiporter subunit LL3_RS15445 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LL3_RS15450 PF03334 Na+/H+ antiporter subunit LL3_RS15455 PF03061 Thioesterase superfamily LL3_RS15460 PF00072 Response regulator receiver domain LL3_RS15460 PF00196 Bacterial regulatory proteins, luxR family LL3_RS15465 PF07730 Histidine kinase LL3_RS15465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS15475 PF00348 Polyprenyl synthetase LL3_RS15480 PF08181 DegQ (SacQ) family LL3_RS15490 PF08668 HDOD domain LL3_RS15490 PF00563 EAL domain LL3_RS15495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LL3_RS15495 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LL3_RS15495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LL3_RS15500 PF00857 Isochorismatase family LL3_RS15505 PF07997 Protein of unknown function (DUF1694) LL3_RS15510 PF14166 YueH-like protein LL3_RS15515 PF10676 Spore germination protein gerPA/gerPF LL3_RS15520 PF01594 AI-2E family transporter LL3_RS15525 PF10842 Protein of unknown function (DUF2642) LL3_RS15530 PF01966 HD domain LL3_RS15535 PF00106 short chain dehydrogenase LL3_RS15540 PF17355 Family of unknown function (DUF5383) LL3_RS15550 PF12538 DNA transporter LL3_RS15550 PF01580 FtsK/SpoIIIE family LL3_RS15555 PF10140 WXG100 protein secretion system (Wss), protein YukC LL3_RS15560 PF08817 WXG100 protein secretion system (Wss), protein YukD LL3_RS15565 PF06013 Proteins of 100 residues with WXG LL3_RS15570 PF06018 CodY GAF-like domain LL3_RS15570 PF13556 PucR C-terminal helix-turn-helix domain LL3_RS15570 PF17853 GGDEF-like domain LL3_RS15575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LL3_RS15575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LL3_RS15580 PF10042 Uncharacterized conserved protein (DUF2278) LL3_RS15585 PF03621 MbtH-like protein LL3_RS15590 PF00501 AMP-binding enzyme LL3_RS15590 PF00668 Condensation domain LL3_RS15590 PF00975 Thioesterase domain LL3_RS15590 PF13193 AMP-binding enzyme C-terminal domain LL3_RS15590 PF00550 Phosphopantetheine attachment site LL3_RS15595 PF00550 Phosphopantetheine attachment site LL3_RS15595 PF00857 Isochorismatase family LL3_RS15600 PF00501 AMP-binding enzyme LL3_RS15600 PF13193 AMP-binding enzyme C-terminal domain LL3_RS15605 PF00425 chorismate binding enzyme LL3_RS15610 PF00106 short chain dehydrogenase LL3_RS15615 PF00756 Putative esterase LL3_RS15620 PF00174 Oxidoreductase molybdopterin binding domain LL3_RS15625 PF02632 BioY family LL3_RS15630 PF03553 Na+/H+ antiporter family LL3_RS15630 PF13726 Na+-H+ antiporter family LL3_RS15635 PF02789 Cytosol aminopeptidase family, N-terminal domain LL3_RS15635 PF00883 Cytosol aminopeptidase family, catalytic domain LL3_RS15640 PF02681 Divergent PAP2 family LL3_RS15645 PF06725 3D domain LL3_RS15650 PF14068 Putative membrane protein LL3_RS15660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS15665 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS15670 PF00478 IMP dehydrogenase / GMP reductase domain LL3_RS15685 PF00005 ABC transporter LL3_RS15695 PF09221 Bacteriocin class IId cyclical uberolysin-like LL3_RS15710 PF00106 short chain dehydrogenase LL3_RS15715 PF01521 Iron-sulphur cluster biosynthesis LL3_RS15720 PF01678 Diaminopimelate epimerase LL3_RS15725 PF01773 Na+ dependent nucleoside transporter N-terminus LL3_RS15725 PF07662 Na+ dependent nucleoside transporter C-terminus LL3_RS15730 PF07293 Protein of unknown function (DUF1450) LL3_RS15735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS15740 PF07315 Protein of unknown function (DUF1462) LL3_RS15745 PF01106 NifU-like domain LL3_RS15750 PF00326 Prolyl oligopeptidase family LL3_RS15750 PF07676 WD40-like Beta Propeller Repeat LL3_RS15755 PF00288 GHMP kinases N terminal domain LL3_RS15755 PF08544 GHMP kinases C terminal LL3_RS15760 PF00291 Pyridoxal-phosphate dependent enzyme LL3_RS15765 PF00742 Homoserine dehydrogenase LL3_RS15765 PF03447 Homoserine dehydrogenase, NAD binding domain LL3_RS15765 PF01842 ACT domain LL3_RS15775 PF04608 Phosphatidylglycerophosphatase A LL3_RS15780 PF13344 Haloacid dehalogenase-like hydrolase LL3_RS15785 PF01934 Protein of unknown function DUF86 LL3_RS15790 PF06265 Protein of unknown function (DUF1027) LL3_RS15795 PF04055 Radical SAM superfamily LL3_RS15795 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LL3_RS15800 PF01551 Peptidase family M23 LL3_RS15805 PF09560 Sporulation protein YunB (Spo_YunB) LL3_RS15810 PF02872 5'-nucleotidase, C-terminal domain LL3_RS15815 PF01925 Sulfite exporter TauE/SafE LL3_RS15820 PF01904 Protein of unknown function DUF72 LL3_RS15830 PF01979 Amidohydrolase family LL3_RS15835 PF07905 Purine catabolism regulatory protein-like family LL3_RS15835 PF17853 GGDEF-like domain LL3_RS15835 PF13556 PucR C-terminal helix-turn-helix domain LL3_RS15845 PF07690 Major Facilitator Superfamily LL3_RS15850 PF00266 Aminotransferase class-V LL3_RS15855 PF01546 Peptidase family M20/M25/M40 LL3_RS15860 PF04231 Endonuclease I LL3_RS15865 PF00005 ABC transporter LL3_RS15865 PF03459 TOBE domain LL3_RS15865 PF17912 MalK OB fold domain LL3_RS15870 PF07702 UTRA domain LL3_RS15870 PF00392 Bacterial regulatory proteins, gntR family LL3_RS15875 PF00294 pfkB family carbohydrate kinase LL3_RS15880 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS15890 PF01547 Bacterial extracellular solute-binding protein LL3_RS15895 PF01380 SIS domain LL3_RS15900 PF13411 MerR HTH family regulatory protein LL3_RS15915 PF17418 Sporulation delaying protein SdpA LL3_RS15920 PF07853 Protein of unknown function (DUF1648) LL3_RS15925 PF01541 GIY-YIG catalytic domain LL3_RS15930 PF01266 FAD dependent oxidoreductase LL3_RS15940 PF10903 Protein of unknown function (DUF2691) LL3_RS15945 PF01374 Glycosyl hydrolase family 46 LL3_RS15965 PF01471 Putative peptidoglycan binding domain LL3_RS15965 PF01476 LysM domain LL3_RS15965 PF01510 N-acetylmuramoyl-L-alanine amidase LL3_RS15970 PF05105 Bacteriophage holin family LL3_RS15990 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LL3_RS15990 PF12708 Pectate lyase superfamily protein LL3_RS15995 PF13457 GW (Gly-Tryp) dipeptide domain LL3_RS15995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LL3_RS16005 PF01464 Transglycosylase SLT domain LL3_RS16110 PF00145 C-5 cytosine-specific DNA methylase LL3_RS16115 PF01612 3'-5' exonuclease LL3_RS16115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LL3_RS16115 PF00476 DNA polymerase family A LL3_RS16115 PF01367 5'-3' exonuclease, C-terminal SAM fold LL3_RS16165 PF01381 Helix-turn-helix LL3_RS16175 PF02899 Phage integrase, N-terminal SAM-like domain LL3_RS16175 PF00589 Phage integrase family LL3_RS16180 PF01458 Uncharacterized protein family (UPF0051) LL3_RS16185 PF01592 NifU-like N terminal domain LL3_RS16190 PF00266 Aminotransferase class-V LL3_RS16195 PF01458 Uncharacterized protein family (UPF0051) LL3_RS16200 PF00005 ABC transporter LL3_RS16210 PF02627 Carboxymuconolactone decarboxylase family LL3_RS16215 PF03180 NLPA lipoprotein LL3_RS16220 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16225 PF09383 NIL domain LL3_RS16225 PF00005 ABC transporter LL3_RS16230 PF02036 SCP-2 sterol transfer family LL3_RS16235 PF00085 Thioredoxin LL3_RS16240 PF01751 Toprim domain LL3_RS16245 PF10830 Protein of unknown function (DUF2553) LL3_RS16250 PF01597 Glycine cleavage H-protein LL3_RS16255 PF03960 ArsC family LL3_RS16260 PF02770 Acyl-CoA dehydrogenase, middle domain LL3_RS16260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LL3_RS16260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LL3_RS16265 PF02803 Thiolase, C-terminal domain LL3_RS16265 PF00108 Thiolase, N-terminal domain LL3_RS16270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LL3_RS16270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LL3_RS16270 PF00378 Enoyl-CoA hydratase/isomerase LL3_RS16285 PF07875 Coat F domain LL3_RS16290 PF01047 MarR family LL3_RS16295 PF07690 Major Facilitator Superfamily LL3_RS16300 PF02923 Restriction endonuclease BamHI LL3_RS16305 PF01381 Helix-turn-helix LL3_RS16310 PF01555 DNA methylase LL3_RS16315 PF10835 Protein of unknown function (DUF2573) LL3_RS16320 PF00005 ABC transporter LL3_RS16325 PF14039 YusW-like protein LL3_RS16335 PF00106 short chain dehydrogenase LL3_RS16340 PF00210 Ferritin-like domain LL3_RS16345 PF13180 PDZ domain LL3_RS16350 PF00072 Response regulator receiver domain LL3_RS16350 PF00486 Transcriptional regulatory protein, C terminal LL3_RS16355 PF00672 HAMP domain LL3_RS16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS16355 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS16360 PF00440 Bacterial regulatory proteins, tetR family LL3_RS16365 PF00206 Lyase LL3_RS16365 PF10415 Fumarase C C-terminus LL3_RS16370 PF13113 Protein of unknown function (DUF3970) LL3_RS16375 PF03323 Bacillus/Clostridium GerA spore germination protein LL3_RS16380 PF03845 Spore germination protein LL3_RS16390 PF00196 Bacterial regulatory proteins, luxR family LL3_RS16390 PF00072 Response regulator receiver domain LL3_RS16395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS16395 PF00672 HAMP domain LL3_RS16395 PF07730 Histidine kinase LL3_RS16400 PF09922 Cell wall-active antibiotics response 4TMS YvqF LL3_RS16405 PF13349 Putative adhesin LL3_RS16410 PF04012 PspA/IM30 family LL3_RS16420 PF07690 Major Facilitator Superfamily LL3_RS16425 PF01923 Cobalamin adenosyltransferase LL3_RS16430 PF00005 ABC transporter LL3_RS16435 PF01032 FecCD transport family LL3_RS16440 PF01497 Periplasmic binding protein LL3_RS16445 PF00106 short chain dehydrogenase LL3_RS16450 PF08450 SMP-30/Gluconolactonase/LRE-like region LL3_RS16455 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS16460 PF00486 Transcriptional regulatory protein, C terminal LL3_RS16460 PF00072 Response regulator receiver domain LL3_RS16470 PF04545 Sigma-70, region 4 LL3_RS16475 PF00190 Cupin LL3_RS16480 PF14184 Regulatory protein YrvL LL3_RS16485 PF00005 ABC transporter LL3_RS16490 PF01032 FecCD transport family LL3_RS16495 PF01032 FecCD transport family LL3_RS16500 PF01497 Periplasmic binding protein LL3_RS16505 PF04072 Leucine carboxyl methyltransferase LL3_RS16510 PF13520 Amino acid permease LL3_RS16515 PF09575 Small spore protein J (Spore_SspJ) LL3_RS16520 PF04307 LexA-binding, inner membrane-associated putative hydrolase LL3_RS16525 PF00884 Sulfatase LL3_RS16530 PF00884 Sulfatase LL3_RS16535 PF12727 PBP superfamily domain LL3_RS16535 PF12728 Helix-turn-helix domain LL3_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16550 PF00072 Response regulator receiver domain LL3_RS16550 PF00196 Bacterial regulatory proteins, luxR family LL3_RS16560 PF00005 ABC transporter LL3_RS16575 PF00248 Aldo/keto reductase family LL3_RS16585 PF00999 Sodium/hydrogen exchanger family LL3_RS16590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LL3_RS16590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LL3_RS16595 PF00175 Oxidoreductase NAD-binding domain LL3_RS16595 PF00258 Flavodoxin LL3_RS16595 PF00667 FAD binding domain LL3_RS16600 PF13538 UvrD-like helicase C-terminal domain LL3_RS16605 PF03458 UPF0126 domain LL3_RS16615 PF02600 Disulfide bond formation protein DsbB LL3_RS16620 PF13462 Thioredoxin LL3_RS16625 PF00403 Heavy-metal-associated domain LL3_RS16630 PF00403 Heavy-metal-associated domain LL3_RS16635 PF00403 Heavy-metal-associated domain LL3_RS16640 PF02583 Metal-sensitive transcriptional repressor LL3_RS16645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL3_RS16645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL3_RS16650 PF02525 Flavodoxin-like fold LL3_RS16655 PF00296 Luciferase-like monooxygenase LL3_RS16660 PF00462 Glutaredoxin LL3_RS16665 PF00296 Luciferase-like monooxygenase LL3_RS16670 PF00005 ABC transporter LL3_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16690 PF00497 Bacterial extracellular solute-binding proteins, family 3 LL3_RS16695 PF00583 Acetyltransferase (GNAT) family LL3_RS16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS16700 PF03466 LysR substrate binding domain LL3_RS16705 PF00106 short chain dehydrogenase LL3_RS16710 PF01337 Barstar (barnase inhibitor) LL3_RS16715 PF01668 SmpB protein LL3_RS16720 PF17876 Cold shock domain LL3_RS16720 PF00575 S1 RNA binding domain LL3_RS16720 PF08206 Ribonuclease B OB domain LL3_RS16720 PF00773 RNB domain LL3_RS16725 PF12146 Serine aminopeptidase, S33 LL3_RS16730 PF03840 Preprotein translocase SecG subunit LL3_RS16735 PF01381 Helix-turn-helix LL3_RS16750 PF01638 HxlR-like helix-turn-helix LL3_RS16755 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS16760 PF00486 Transcriptional regulatory protein, C terminal LL3_RS16760 PF00072 Response regulator receiver domain LL3_RS16775 PF00005 ABC transporter LL3_RS16780 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LL3_RS16790 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16795 PF00005 ABC transporter LL3_RS16795 PF00571 CBS domain LL3_RS16800 PF12802 MarR family LL3_RS16805 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LL3_RS16815 PF00528 Binding-protein-dependent transport system inner membrane component LL3_RS16820 PF00571 CBS domain LL3_RS16820 PF00005 ABC transporter LL3_RS16825 PF12802 MarR family LL3_RS16830 PF01914 MarC family integral membrane protein LL3_RS16840 PF13240 zinc-ribbon domain LL3_RS16845 PF00583 Acetyltransferase (GNAT) family LL3_RS16860 PF02585 GlcNAc-PI de-N-acetylase LL3_RS16875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL3_RS16880 PF01370 NAD dependent epimerase/dehydratase family LL3_RS16885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL3_RS16890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL3_RS16890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL3_RS16890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL3_RS16895 PF02225 PA domain LL3_RS16895 PF04389 Peptidase family M28 LL3_RS16900 PF03952 Enolase, N-terminal domain LL3_RS16900 PF00113 Enolase, C-terminal TIM barrel domain LL3_RS16905 PF01676 Metalloenzyme superfamily LL3_RS16905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LL3_RS16910 PF00121 Triosephosphate isomerase LL3_RS16915 PF00162 Phosphoglycerate kinase LL3_RS16925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LL3_RS16925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LL3_RS16930 PF04198 Putative sugar-binding domain LL3_RS16935 PF00083 Sugar (and other) transporter LL3_RS16940 PF00392 Bacterial regulatory proteins, gntR family LL3_RS16945 PF00296 Luciferase-like monooxygenase LL3_RS16950 PF03466 LysR substrate binding domain LL3_RS16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS16955 PF00892 EamA-like transporter family LL3_RS16960 PF00324 Amino acid permease LL3_RS16965 PF01418 Helix-turn-helix domain, rpiR family LL3_RS16965 PF01380 SIS domain LL3_RS16970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LL3_RS16970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LL3_RS16975 PF02447 GntP family permease LL3_RS16980 PF02589 LUD domain LL3_RS16985 PF11870 Domain of unknown function (DUF3390) LL3_RS16985 PF02589 LUD domain LL3_RS16985 PF13183 4Fe-4S dicluster domain LL3_RS16990 PF02754 Cysteine-rich domain LL3_RS17000 PF07729 FCD domain LL3_RS17000 PF00392 Bacterial regulatory proteins, gntR family LL3_RS17005 PF02652 L-lactate permease LL3_RS17010 PF00309 Sigma-54 factor, Activator interacting domain (AID) LL3_RS17010 PF04552 Sigma-54, DNA binding domain LL3_RS17010 PF04963 Sigma-54 factor, core binding domain LL3_RS17015 PF09628 YvfG protein LL3_RS17020 PF04230 Polysaccharide pyruvyl transferase LL3_RS17025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL3_RS17030 PF17836 PglD N-terminal domain LL3_RS17030 PF00132 Bacterial transferase hexapeptide (six repeats) LL3_RS17035 PF02397 Bacterial sugar transferase LL3_RS17040 PF01943 Polysaccharide biosynthesis protein LL3_RS17040 PF14667 Polysaccharide biosynthesis C-terminal domain LL3_RS17045 PF00535 Glycosyl transferase family 2 LL3_RS17050 PF04230 Polysaccharide pyruvyl transferase LL3_RS17055 PF00535 Glycosyl transferase family 2 LL3_RS17065 PF00534 Glycosyl transferases group 1 LL3_RS17065 PF13439 Glycosyltransferase Family 4 LL3_RS17070 PF00535 Glycosyl transferase family 2 LL3_RS17075 PF00534 Glycosyl transferases group 1 LL3_RS17075 PF13439 Glycosyltransferase Family 4 LL3_RS17080 PF02719 Polysaccharide biosynthesis protein LL3_RS17085 PF13614 AAA domain LL3_RS17090 PF02706 Chain length determinant protein LL3_RS17095 PF01381 Helix-turn-helix LL3_RS17095 PF08671 Anti-repressor SinI LL3_RS17100 PF00135 Carboxylesterase family LL3_RS17110 PF01872 RibD C-terminal domain LL3_RS17115 PF01494 FAD binding domain LL3_RS17130 PF00583 Acetyltransferase (GNAT) family LL3_RS17135 PF05870 Phenolic acid decarboxylase (PAD) LL3_RS17175 PF08244 Glycosyl hydrolases family 32 C terminal LL3_RS17175 PF00251 Glycosyl hydrolases family 32 N-terminal domain LL3_RS17180 PF01306 LacY proton/sugar symporter LL3_RS17185 PF00356 Bacterial regulatory proteins, lacI family LL3_RS17190 PF00574 Clp protease LL3_RS17195 PF03466 LysR substrate binding domain LL3_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS17200 PF04303 PrpF protein LL3_RS17205 PF00083 Sugar (and other) transporter LL3_RS17215 PF03641 Possible lysine decarboxylase LL3_RS17220 PF03819 MazG nucleotide pyrophosphohydrolase domain LL3_RS17225 PF00916 Sulfate permease family LL3_RS17225 PF01740 STAS domain LL3_RS17230 PF00484 Carbonic anhydrase LL3_RS17240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LL3_RS17240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LL3_RS17245 PF00545 ribonuclease LL3_RS17250 PF00797 N-acetyltransferase LL3_RS17255 PF00381 PTS HPr component phosphorylation site LL3_RS17260 PF02650 WhiA C-terminal HTH domain LL3_RS17260 PF14527 WhiA LAGLIDADG-like domain LL3_RS17260 PF10298 WhiA N-terminal LAGLIDADG-like domain LL3_RS17265 PF01933 Uncharacterised protein family UPF0052 LL3_RS17270 PF03668 P-loop ATPase protein family LL3_RS17275 PF00293 NUDIX domain LL3_RS17280 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS17285 PF00877 NlpC/P60 family LL3_RS17295 PF00989 PAS fold LL3_RS17295 PF00672 HAMP domain LL3_RS17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS17295 PF18698 Histidine kinase sensor domain LL3_RS17295 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS17300 PF00486 Transcriptional regulatory protein, C terminal LL3_RS17300 PF00072 Response regulator receiver domain LL3_RS17305 PF00664 ABC transporter transmembrane region LL3_RS17305 PF00005 ABC transporter LL3_RS17310 PF01502 Phosphoribosyl-AMP cyclohydrolase LL3_RS17310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LL3_RS17315 PF00977 Histidine biosynthesis protein LL3_RS17320 PF00977 Histidine biosynthesis protein LL3_RS17325 PF00117 Glutamine amidotransferase class-I LL3_RS17330 PF00475 Imidazoleglycerol-phosphate dehydratase LL3_RS17335 PF00815 Histidinol dehydrogenase LL3_RS17340 PF01634 ATP phosphoribosyltransferase LL3_RS17345 PF13393 Histidyl-tRNA synthetase LL3_RS17350 PF13529 Peptidase_C39 like family LL3_RS17355 PF14602 Hexapeptide repeat of succinyl-transferase LL3_RS17360 PF13419 Haloacid dehalogenase-like hydrolase LL3_RS17365 PF01790 Prolipoprotein diacylglyceryl transferase LL3_RS17370 PF07475 HPr Serine kinase C-terminal domain LL3_RS17370 PF02603 HPr Serine kinase N terminus LL3_RS17375 PF01979 Amidohydrolase family LL3_RS17380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LL3_RS17385 PF00392 Bacterial regulatory proteins, gntR family LL3_RS17385 PF07702 UTRA domain LL3_RS17390 PF00440 Bacterial regulatory proteins, tetR family LL3_RS17395 PF00149 Calcineurin-like phosphoesterase LL3_RS17400 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LL3_RS17405 PF04024 PspC domain LL3_RS17410 PF13349 Putative adhesin LL3_RS17425 PF00005 ABC transporter LL3_RS17425 PF17755 UvrA DNA-binding domain LL3_RS17425 PF17760 UvrA interaction domain LL3_RS17430 PF12344 Ultra-violet resistance protein B LL3_RS17430 PF00271 Helicase conserved C-terminal domain LL3_RS17430 PF04851 Type III restriction enzyme, res subunit LL3_RS17430 PF02151 UvrB/uvrC motif LL3_RS17430 PF17757 UvrB interaction domain LL3_RS17435 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LL3_RS17440 PF00391 PEP-utilising enzyme, mobile domain LL3_RS17440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LL3_RS17445 PF00440 Bacterial regulatory proteins, tetR family LL3_RS17450 PF07690 Major Facilitator Superfamily LL3_RS17455 PF17735 Biofilm surface layer A LL3_RS17465 PF17820 PDZ domain LL3_RS17470 PF17423 Swarming motility protein LL3_RS17475 PF17820 PDZ domain LL3_RS17475 PF03572 Peptidase family S41 LL3_RS17475 PF01471 Putative peptidoglycan binding domain LL3_RS17480 PF13229 Right handed beta helix region LL3_RS17485 PF18075 FtsX extracellular domain LL3_RS17485 PF02687 FtsX-like permease family LL3_RS17490 PF00005 ABC transporter LL3_RS17495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LL3_RS17500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS17500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS17505 PF03462 PCRF domain LL3_RS17505 PF00472 RF-1 domain LL3_RS17510 PF07517 SecA DEAD-like domain LL3_RS17510 PF07516 SecA Wing and Scaffold domain LL3_RS17510 PF01043 SecA preprotein cross-linking domain LL3_RS17510 PF02810 SEC-C motif LL3_RS17515 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LL3_RS17515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LL3_RS17530 PF02561 Flagellar protein FliS LL3_RS17535 PF07195 Flagellar hook-associated protein 2 C-terminus LL3_RS17535 PF02465 Flagellar hook-associated protein 2 N-terminus LL3_RS17535 PF07196 Flagellin hook IN motif LL3_RS17540 PF00669 Bacterial flagellin N-terminal helical region LL3_RS17540 PF00700 Bacterial flagellin C-terminal helical region LL3_RS17545 PF02599 Global regulator protein family LL3_RS17550 PF02623 FliW protein LL3_RS17560 PF00669 Bacterial flagellin N-terminal helical region LL3_RS17560 PF00700 Bacterial flagellin C-terminal helical region LL3_RS17565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LL3_RS17565 PF00460 Flagella basal body rod protein LL3_RS17570 PF05130 FlgN protein LL3_RS17575 PF04316 Anti-sigma-28 factor, FlgM LL3_RS17590 PF10719 Late competence development protein ComFB LL3_RS17595 PF04851 Type III restriction enzyme, res subunit LL3_RS17595 PF00271 Helicase conserved C-terminal domain LL3_RS17600 PF02645 Uncharacterised protein, DegV family COG1307 LL3_RS17605 PF00196 Bacterial regulatory proteins, luxR family LL3_RS17605 PF00072 Response regulator receiver domain LL3_RS17610 PF07730 Histidine kinase LL3_RS17610 PF05384 Sensor protein DegS LL3_RS17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS17615 PF01205 Uncharacterized protein family UPF0029 LL3_RS17615 PF09186 Domain of unknown function (DUF1949) LL3_RS17620 PF03816 Cell envelope-related transcriptional attenuator domain LL3_RS17625 PF00953 Glycosyl transferase family 4 LL3_RS17635 PF00535 Glycosyl transferase family 2 LL3_RS17640 PF02706 Chain length determinant protein LL3_RS17645 PF04932 O-Antigen ligase LL3_RS17650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL3_RS17650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL3_RS17650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL3_RS17655 PF00534 Glycosyl transferases group 1 LL3_RS17655 PF13439 Glycosyltransferase Family 4 LL3_RS17660 PF14667 Polysaccharide biosynthesis C-terminal domain LL3_RS17660 PF01943 Polysaccharide biosynthesis protein LL3_RS17665 PF02397 Bacterial sugar transferase LL3_RS17670 PF01520 N-acetylmuramoyl-L-alanine amidase LL3_RS17670 PF04122 Putative cell wall binding repeat 2 LL3_RS17675 PF08486 Stage II sporulation protein LL3_RS17675 PF04122 Putative cell wall binding repeat 2 LL3_RS17685 PF03816 Cell envelope-related transcriptional attenuator domain LL3_RS17690 PF02350 UDP-N-acetylglucosamine 2-epimerase LL3_RS17695 PF00483 Nucleotidyl transferase LL3_RS17700 PF00005 ABC transporter LL3_RS17705 PF01061 ABC-2 type transporter LL3_RS17710 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL3_RS17715 PF00534 Glycosyl transferases group 1 LL3_RS17715 PF09318 Glycosyl transferase 1 domain A LL3_RS17720 PF01467 Cytidylyltransferase-like LL3_RS17725 PF03808 Glycosyl transferase WecB/TagA/CpsF family LL3_RS17730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL3_RS17735 PF05036 Sporulation related domain LL3_RS17735 PF08239 Bacterial SH3 domain LL3_RS17735 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LL3_RS17740 PF01238 Phosphomannose isomerase type I LL3_RS17750 PF03845 Spore germination protein LL3_RS17755 PF05504 Spore germination B3/ GerAC like, C-terminal LL3_RS17760 PF00535 Glycosyl transferase family 2 LL3_RS17765 PF00083 Sugar (and other) transporter LL3_RS17770 PF03816 Cell envelope-related transcriptional attenuator domain LL3_RS17780 PF04791 LMBR1-like membrane protein LL3_RS17785 PF00877 NlpC/P60 family LL3_RS17790 PF09587 Bacterial capsule synthesis protein PGA_cap LL3_RS17795 PF14102 Capsule biosynthesis CapC LL3_RS17800 PF08245 Mur ligase middle domain LL3_RS17805 PF03323 Bacillus/Clostridium GerA spore germination protein LL3_RS17810 PF03845 Spore germination protein LL3_RS17825 PF00356 Bacterial regulatory proteins, lacI family LL3_RS17830 PF00294 pfkB family carbohydrate kinase LL3_RS17835 PF05025 RbsD / FucU transport protein family LL3_RS17840 PF00005 ABC transporter LL3_RS17845 PF02653 Branched-chain amino acid transport system / permease component LL3_RS17850 PF13407 Periplasmic binding protein domain LL3_RS17855 PF08239 Bacterial SH3 domain LL3_RS17860 PF02525 Flavodoxin-like fold LL3_RS17865 PF03306 Alpha-acetolactate decarboxylase LL3_RS17870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL3_RS17870 PF00205 Thiamine pyrophosphate enzyme, central domain LL3_RS17870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL3_RS17875 PF03466 LysR substrate binding domain LL3_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS17880 PF02040 Arsenical pump membrane protein LL3_RS17895 PF08757 CotH kinase protein LL3_RS17905 PF01613 Flavin reductase like domain LL3_RS17920 PF01037 Lrp/AsnC ligand binding domain LL3_RS17920 PF13404 AsnC-type helix-turn-helix domain LL3_RS17925 PF02417 Chromate transporter LL3_RS17930 PF02417 Chromate transporter LL3_RS17960 PF14431 YwqJ-like deaminase LL3_RS17960 PF14449 Pre-toxin TG LL3_RS17960 PF04740 LXG domain of WXG superfamily LL3_RS17970 PF16888 Domain of unknown function (DUF5082) LL3_RS17975 PF09234 Domain of unknown function (DUF1963) LL3_RS17980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LL3_RS17980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LL3_RS17980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LL3_RS17990 PF13614 AAA domain LL3_RS17995 PF13807 G-rich domain on putative tyrosine kinase LL3_RS17995 PF02706 Chain length determinant protein LL3_RS18005 PF04434 SWIM zinc finger LL3_RS18010 PF12419 SNF2 Helicase protein LL3_RS18010 PF00176 SNF2 family N-terminal domain LL3_RS18010 PF00271 Helicase conserved C-terminal domain LL3_RS18020 PF08220 DeoR-like helix-turn-helix domain LL3_RS18020 PF00455 DeoR C terminal sensor domain LL3_RS18025 PF00436 Single-strand binding protein family LL3_RS18035 PF14183 YwpF-like protein LL3_RS18040 PF01741 Large-conductance mechanosensitive channel, MscL LL3_RS18045 PF07977 FabA-like domain LL3_RS18050 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS18055 PF00460 Flagella basal body rod protein LL3_RS18055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LL3_RS18060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LL3_RS18060 PF00460 Flagella basal body rod protein LL3_RS18070 PF12116 Stage III sporulation protein D LL3_RS18075 PF01047 MarR family LL3_RS18080 PF07690 Major Facilitator Superfamily LL3_RS18085 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LL3_RS18090 PF07690 Major Facilitator Superfamily LL3_RS18095 PF00857 Isochorismatase family LL3_RS18100 PF00909 Ammonium Transporter Family LL3_RS18105 PF00543 Nitrogen regulatory protein P-II LL3_RS18110 PF01098 Cell cycle protein LL3_RS18115 PF01569 PAP2 superfamily LL3_RS18120 PF04892 VanZ like family LL3_RS18125 PF01551 Peptidase family M23 LL3_RS18130 PF00583 Acetyltransferase (GNAT) family LL3_RS18135 PF17319 Family of unknown function (DUF5362) LL3_RS18140 PF17370 Family of unknown function (DUF5392) LL3_RS18145 PF13396 Phospholipase_D-nuclease N-terminal LL3_RS18145 PF13091 PLD-like domain LL3_RS18155 PF17319 Family of unknown function (DUF5362) LL3_RS18160 PF13460 NAD(P)H-binding LL3_RS18165 PF02082 Transcriptional regulator LL3_RS18170 PF00449 Urease alpha-subunit, N-terminal domain LL3_RS18170 PF01979 Amidohydrolase family LL3_RS18175 PF00699 Urease beta subunit LL3_RS18180 PF00547 Urease, gamma subunit LL3_RS18185 PF05532 CsbD-like LL3_RS18195 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS18195 PF17874 MalT-like TPR region LL3_RS18200 PF06463 Molybdenum Cofactor Synthesis C LL3_RS18200 PF04055 Radical SAM superfamily LL3_RS18205 PF02634 FdhD/NarQ family LL3_RS18210 PF00092 von Willebrand factor type A domain LL3_RS18215 PF00092 von Willebrand factor type A domain LL3_RS18220 PF08486 Stage II sporulation protein LL3_RS18225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL3_RS18230 PF08680 TATA-box binding LL3_RS18235 PF06612 Protein of unknown function (DUF1146) LL3_RS18245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LL3_RS18245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LL3_RS18250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL3_RS18250 PF02874 ATP synthase alpha/beta family, beta-barrel domain LL3_RS18255 PF00231 ATP synthase LL3_RS18260 PF02874 ATP synthase alpha/beta family, beta-barrel domain LL3_RS18260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL3_RS18260 PF00306 ATP synthase alpha/beta chain, C terminal domain LL3_RS18265 PF00213 ATP synthase delta (OSCP) subunit LL3_RS18270 PF00430 ATP synthase B/B' CF(0) LL3_RS18275 PF00137 ATP synthase subunit C LL3_RS18280 PF00119 ATP synthase A chain LL3_RS18285 PF03899 ATP synthase I chain LL3_RS18295 PF00464 Serine hydroxymethyltransferase LL3_RS18300 PF04260 Protein of unknown function (DUF436) LL3_RS18305 PF02502 Ribose/Galactose Isomerase LL3_RS18310 PF01451 Low molecular weight phosphotyrosine protein phosphatase LL3_RS18315 PF02659 Putative manganese efflux pump LL3_RS18320 PF01300 Telomere recombination LL3_RS18320 PF03481 Putative GTP-binding controlling metal-binding LL3_RS18330 PF09551 Stage II sporulation protein R (spore_II_R) LL3_RS18335 PF17094 Uncharacterised protein family (UPF0715) LL3_RS18340 PF17247 Family of unknown function (DUF5316) LL3_RS18345 PF17827 PrmC N-terminal domain LL3_RS18345 PF05175 Methyltransferase small domain LL3_RS18350 PF00472 RF-1 domain LL3_RS18350 PF03462 PCRF domain LL3_RS18355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS18360 PF13411 MerR HTH family regulatory protein LL3_RS18365 PF03547 Membrane transport protein LL3_RS18370 PF03949 Malic enzyme, NAD binding domain LL3_RS18370 PF00390 Malic enzyme, N-terminal domain LL3_RS18375 PF00265 Thymidine kinase LL3_RS18380 PF01197 Ribosomal protein L31 LL3_RS18385 PF07498 Rho termination factor, N-terminal domain LL3_RS18385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LL3_RS18385 PF07497 Rho termination factor, RNA-binding domain LL3_RS18390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LL3_RS18395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LL3_RS18400 PF00923 Transaldolase/Fructose-6-phosphate aldolase LL3_RS18405 PF01116 Fructose-bisphosphate aldolase class-II LL3_RS18410 PF00072 Response regulator receiver domain LL3_RS18415 PF10740 Domain of unknown function (DUF2529) LL3_RS18420 PF06418 CTP synthase N-terminus LL3_RS18420 PF00117 Glutamine amidotransferase class-I LL3_RS18425 PF05066 HB1, ASXL, restriction endonuclease HTH domain LL3_RS18430 PF02754 Cysteine-rich domain LL3_RS18430 PF13183 4Fe-4S dicluster domain LL3_RS18435 PF13091 PLD-like domain LL3_RS18440 PF03851 UV-endonuclease UvdE LL3_RS18450 PF00664 ABC transporter transmembrane region LL3_RS18450 PF00005 ABC transporter LL3_RS18455 PF13396 Phospholipase_D-nuclease N-terminal LL3_RS18455 PF13091 PLD-like domain LL3_RS18460 PF02665 Nitrate reductase gamma subunit LL3_RS18465 PF02613 Nitrate reductase delta subunit LL3_RS18470 PF13247 4Fe-4S dicluster domain LL3_RS18470 PF14711 Respiratory nitrate reductase beta C-terminal LL3_RS18475 PF14710 Respiratory nitrate reductase alpha N-terminal LL3_RS18475 PF00384 Molybdopterin oxidoreductase LL3_RS18475 PF01568 Molydopterin dinucleotide binding domain LL3_RS18485 PF14256 YwiC-like protein LL3_RS18490 PF00325 Bacterial regulatory proteins, crp family LL3_RS18490 PF00027 Cyclic nucleotide-binding domain LL3_RS18495 PF07690 Major Facilitator Superfamily LL3_RS18500 PF05746 DALR anticodon binding domain LL3_RS18500 PF00750 tRNA synthetases class I (R) LL3_RS18500 PF03485 Arginyl tRNA synthetase N terminal domain LL3_RS18505 PF09148 Domain of unknown function (DUF1934) LL3_RS18520 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS18525 PF11131 Rap-phr extracellular signalling LL3_RS18530 PF00491 Arginase family LL3_RS18535 PF17284 Spermidine synthase tetramerisation domain LL3_RS18540 PF00912 Transglycosylase LL3_RS18540 PF00905 Penicillin binding protein transpeptidase domain LL3_RS18550 PF08741 YwhD family LL3_RS18555 PF02163 Peptidase family M50 LL3_RS18560 PF01361 Tautomerase enzyme LL3_RS18565 PF01047 MarR family LL3_RS18570 PF13520 Amino acid permease LL3_RS18580 PF01966 HD domain LL3_RS18585 PF07293 Protein of unknown function (DUF1450) LL3_RS18595 PF03551 Transcriptional regulator PadR-like family LL3_RS18610 PF12679 ABC-2 family transporter protein LL3_RS18635 PF03099 Biotin/lipoate A/B protein ligase family LL3_RS18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS18640 PF03466 LysR substrate binding domain LL3_RS18645 PF03601 Conserved hypothetical protein 698 LL3_RS18650 PF01515 Phosphate acetyl/butaryl transferase LL3_RS18655 PF06778 Chlorite dismutase LL3_RS18665 PF00155 Aminotransferase class I and II LL3_RS18670 PF07690 Major Facilitator Superfamily LL3_RS18685 PF07883 Cupin domain LL3_RS18695 PF07690 Major Facilitator Superfamily LL3_RS18700 PF07690 Major Facilitator Superfamily LL3_RS18705 PF00324 Amino acid permease LL3_RS18710 PF01546 Peptidase family M20/M25/M40 LL3_RS18715 PF00171 Aldehyde dehydrogenase family LL3_RS18720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LL3_RS18720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LL3_RS18725 PF17735 Biofilm surface layer A LL3_RS18730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LL3_RS18735 PF04321 RmlD substrate binding domain LL3_RS18740 PF16363 GDP-mannose 4,6 dehydratase LL3_RS18745 PF00483 Nucleotidyl transferase LL3_RS18750 PF04101 Glycosyltransferase family 28 C-terminal domain LL3_RS18755 PF02348 Cytidylyltransferase LL3_RS18760 PF08666 SAF domain LL3_RS18760 PF03102 NeuB family LL3_RS18765 PF00583 Acetyltransferase (GNAT) family LL3_RS18770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LL3_RS18775 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LL3_RS18780 PF00535 Glycosyl transferase family 2 LL3_RS18785 PF09671 Spore coat protein (Spore_GerQ) LL3_RS18790 PF04241 Protein of unknown function (DUF423) LL3_RS18795 PF00860 Permease family LL3_RS18800 PF17261 Family of unknown function (DUF5327) LL3_RS18805 PF03167 Uracil DNA glycosylase superfamily LL3_RS18810 PF00535 Glycosyl transferase family 2 LL3_RS18820 PF08543 Phosphomethylpyrimidine kinase LL3_RS18830 PF08244 Glycosyl hydrolases family 32 C terminal LL3_RS18830 PF00251 Glycosyl hydrolases family 32 N-terminal domain LL3_RS18835 PF00367 phosphotransferase system, EIIB LL3_RS18835 PF02378 Phosphotransferase system, EIIC LL3_RS18840 PF00874 PRD domain LL3_RS18840 PF03123 CAT RNA binding domain LL3_RS18850 PF00082 Subtilase family LL3_RS18850 PF02225 PA domain LL3_RS18850 PF05922 Peptidase inhibitor I9 LL3_RS18850 PF13860 FlgD Ig-like domain LL3_RS18855 PF00296 Luciferase-like monooxygenase LL3_RS18860 PF08279 HTH domain LL3_RS18860 PF13280 WYL domain LL3_RS18880 PF00881 Nitroreductase family LL3_RS18885 PF01098 Cell cycle protein LL3_RS18890 PF00583 Acetyltransferase (GNAT) family LL3_RS18895 PF17368 Spore morphogenesis and germination YwcE LL3_RS18900 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LL3_RS18905 PF00510 Cytochrome c oxidase subunit III LL3_RS18910 PF00115 Cytochrome C and Quinol oxidase polypeptide I LL3_RS18915 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LL3_RS18915 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LL3_RS18920 PF04226 Transglycosylase associated protein LL3_RS18925 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LL3_RS18925 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LL3_RS18930 PF08544 GHMP kinases C terminal LL3_RS18930 PF10509 Galactokinase galactose-binding signature LL3_RS18930 PF00288 GHMP kinases N terminal domain LL3_RS18935 PF04138 GtrA-like protein LL3_RS18940 PF00440 Bacterial regulatory proteins, tetR family LL3_RS18945 PF08671 Anti-repressor SinI LL3_RS18960 PF01323 DSBA-like thioredoxin domain LL3_RS18965 PF04261 Dyp-type peroxidase family LL3_RS18965 PF10518 TAT (twin-arginine translocation) pathway signal sequence LL3_RS18970 PF09375 Imelysin LL3_RS18975 PF03239 Iron permease FTR1 family LL3_RS18980 PF02581 Thiamine monophosphate synthase LL3_RS18985 PF02110 Hydroxyethylthiazole kinase family LL3_RS18990 PF03466 LysR substrate binding domain LL3_RS18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LL3_RS18995 PF03788 LrgA family LL3_RS19000 PF04172 LrgB-like family LL3_RS19005 PF09962 Uncharacterized conserved protein (DUF2196) LL3_RS19010 PF13411 MerR HTH family regulatory protein LL3_RS19010 PF07739 TipAS antibiotic-recognition domain LL3_RS19015 PF10026 Predicted Zn-dependent protease (DUF2268) LL3_RS19020 PF17785 PUA-like domain LL3_RS19020 PF10672 S-adenosylmethionine-dependent methyltransferase LL3_RS19025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS19030 PF02378 Phosphotransferase system, EIIC LL3_RS19035 PF00082 Subtilase family LL3_RS19040 PF01501 Glycosyl transferase family 8 LL3_RS19045 PF04607 Region found in RelA / SpoT proteins LL3_RS19050 PF01040 UbiA prenyltransferase family LL3_RS19055 PF12459 D-Ala-teichoic acid biosynthesis protein LL3_RS19060 PF13193 AMP-binding enzyme C-terminal domain LL3_RS19060 PF00501 AMP-binding enzyme LL3_RS19065 PF03062 MBOAT, membrane-bound O-acyltransferase family LL3_RS19070 PF00550 Phosphopantetheine attachment site LL3_RS19075 PF04914 DltD protein LL3_RS19080 PF01063 Amino-transferase class IV LL3_RS19085 PF02056 Family 4 glycosyl hydrolase LL3_RS19085 PF11975 Family 4 glycosyl hydrolase C-terminal domain LL3_RS19090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LL3_RS19095 PF02378 Phosphotransferase system, EIIC LL3_RS19100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS19110 PF02245 Methylpurine-DNA glycosylase (MPG) LL3_RS19115 PF01032 FecCD transport family LL3_RS19120 PF01032 FecCD transport family LL3_RS19130 PF01022 Bacterial regulatory protein, arsR family LL3_RS19135 PF02040 Arsenical pump membrane protein LL3_RS19140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LL3_RS19145 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LL3_RS19150 PF02378 Phosphotransferase system, EIIC LL3_RS19155 PF00232 Glycosyl hydrolase family 1 LL3_RS19160 PF00480 ROK family LL3_RS19165 PF01238 Phosphomannose isomerase type I LL3_RS19170 PF02156 Glycosyl hydrolase family 26 LL3_RS19175 PF00199 Catalase LL3_RS19175 PF06628 Catalase-related immune-responsive LL3_RS19180 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LL3_RS19185 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LL3_RS19190 PF01256 Carbohydrate kinase LL3_RS19195 PF00664 ABC transporter transmembrane region LL3_RS19195 PF00005 ABC transporter LL3_RS19200 PF00664 ABC transporter transmembrane region LL3_RS19200 PF00005 ABC transporter LL3_RS19205 PF02322 Cytochrome bd terminal oxidase subunit II LL3_RS19210 PF01654 Cytochrome bd terminal oxidase subunit I LL3_RS19215 PF03390 2-hydroxycarboxylate transporter family LL3_RS19220 PF01522 Polysaccharide deacetylase LL3_RS19225 PF00005 ABC transporter LL3_RS19225 PF17912 MalK OB fold domain LL3_RS19225 PF03459 TOBE domain LL3_RS19230 PF13556 PucR C-terminal helix-turn-helix domain LL3_RS19235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS19235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS19240 PF11611 Domain of unknown function (DUF4352) LL3_RS19245 PF16363 GDP-mannose 4,6 dehydratase LL3_RS19250 PF07687 Peptidase dimerisation domain LL3_RS19250 PF01546 Peptidase family M20/M25/M40 LL3_RS19255 PF04525 LURP-one-related LL3_RS19260 PF01717 Cobalamin-independent synthase, Catalytic domain LL3_RS19265 PF08241 Methyltransferase domain LL3_RS19270 PF01773 Na+ dependent nucleoside transporter N-terminus LL3_RS19270 PF07662 Na+ dependent nucleoside transporter C-terminus LL3_RS19290 PF06628 Catalase-related immune-responsive LL3_RS19290 PF18011 C-terminal domain found in long catalases LL3_RS19290 PF00199 Catalase LL3_RS19295 PF03600 Citrate transporter LL3_RS19300 PF00722 Glycosyl hydrolases family 16 LL3_RS19305 PF03123 CAT RNA binding domain LL3_RS19305 PF00874 PRD domain LL3_RS19310 PF11700 Vacuole effluxer Atg22 like LL3_RS19315 PF00271 Helicase conserved C-terminal domain LL3_RS19315 PF03880 DbpA RNA binding domain LL3_RS19315 PF00270 DEAD/DEAH box helicase LL3_RS19330 PF14176 YxiJ-like protein LL3_RS19355 PF00544 Pectate lyase LL3_RS19360 PF00892 EamA-like transporter family LL3_RS19365 PF00582 Universal stress protein family LL3_RS19370 PF00232 Glycosyl hydrolase family 1 LL3_RS19375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LL3_RS19375 PF00367 phosphotransferase system, EIIB LL3_RS19375 PF02378 Phosphotransferase system, EIIC LL3_RS19385 PF00145 C-5 cytosine-specific DNA methylase LL3_RS19390 PF01119 DNA mismatch repair protein, C-terminal domain LL3_RS19390 PF08676 MutL C terminal dimerisation domain LL3_RS19410 PF04616 Glycosyl hydrolases family 43 LL3_RS19410 PF16369 C-terminal lipocalin-like domain LL3_RS19415 PF09021 HutP LL3_RS19420 PF00221 Aromatic amino acid lyase LL3_RS19425 PF17391 Urocanase N-terminal domain LL3_RS19425 PF17392 Urocanase C-terminal domain LL3_RS19425 PF01175 Urocanase Rossmann-like domain LL3_RS19430 PF01979 Amidohydrolase family LL3_RS19435 PF00491 Arginase family LL3_RS19440 PF00324 Amino acid permease LL3_RS19445 PF00591 Glycosyl transferase family, a/b domain LL3_RS19445 PF02885 Glycosyl transferase family, helical bundle domain LL3_RS19445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LL3_RS19450 PF07662 Na+ dependent nucleoside transporter C-terminus LL3_RS19450 PF01773 Na+ dependent nucleoside transporter N-terminus LL3_RS19455 PF01791 DeoC/LacD family aldolase LL3_RS19460 PF04198 Putative sugar-binding domain LL3_RS19475 PF11631 Protein of unknown function (DUF3255) LL3_RS19495 PF01497 Periplasmic binding protein LL3_RS19500 PF06486 Protein of unknown function (DUF1093) LL3_RS19505 PF02687 FtsX-like permease family LL3_RS19510 PF00005 ABC transporter LL3_RS19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS19520 PF00072 Response regulator receiver domain LL3_RS19520 PF00486 Transcriptional regulatory protein, C terminal LL3_RS19525 PF01116 Fructose-bisphosphate aldolase class-II LL3_RS19530 PF01261 Xylose isomerase-like TIM barrel LL3_RS19535 PF01261 Xylose isomerase-like TIM barrel LL3_RS19540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LL3_RS19540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LL3_RS19545 PF07690 Major Facilitator Superfamily LL3_RS19550 PF01261 Xylose isomerase-like TIM barrel LL3_RS19555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LL3_RS19555 PF00205 Thiamine pyrophosphate enzyme, central domain LL3_RS19555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LL3_RS19560 PF00294 pfkB family carbohydrate kinase LL3_RS19565 PF04962 KduI/IolB family LL3_RS19570 PF00171 Aldehyde dehydrogenase family LL3_RS19575 PF08220 DeoR-like helix-turn-helix domain LL3_RS19575 PF00455 DeoR C terminal sensor domain LL3_RS19580 PF00248 Aldo/keto reductase family LL3_RS19585 PF00083 Sugar (and other) transporter LL3_RS19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS19590 PF00183 Hsp90 protein LL3_RS19600 PF00196 Bacterial regulatory proteins, luxR family LL3_RS19600 PF00072 Response regulator receiver domain LL3_RS19605 PF07730 Histidine kinase LL3_RS19610 PF00487 Fatty acid desaturase LL3_RS19615 PF00440 Bacterial regulatory proteins, tetR family LL3_RS19620 PF00171 Aldehyde dehydrogenase family LL3_RS19625 PF13570 PQQ-like domain LL3_RS19625 PF13360 PQQ-like domain LL3_RS19625 PF01011 PQQ enzyme repeat LL3_RS19640 PF07690 Major Facilitator Superfamily LL3_RS19645 PF06271 RDD family LL3_RS19655 PF00578 AhpC/TSA family LL3_RS19660 PF13192 Thioredoxin domain LL3_RS19660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LL3_RS19670 PF00324 Amino acid permease LL3_RS19690 PF01526 Tn3 transposase DDE domain LL3_RS19690 PF13700 Domain of unknown function (DUF4158) LL3_RS19695 PF00239 Resolvase, N terminal domain LL3_RS19695 PF02796 Helix-turn-helix domain of resolvase LL3_RS19720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS19725 PF07451 Stage V sporulation protein AD (SpoVAD) LL3_RS19730 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LL3_RS19740 PF04239 Protein of unknown function (DUF421) LL3_RS19750 PF13091 PLD-like domain LL3_RS19750 PF13396 Phospholipase_D-nuclease N-terminal LL3_RS19760 PF06874 Firmicute fructose-1,6-bisphosphatase LL3_RS19765 PF00111 2Fe-2S iron-sulfur cluster binding domain LL3_RS19765 PF01799 [2Fe-2S] binding domain LL3_RS19775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LL3_RS19775 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LL3_RS19780 PF12804 MobA-like NTP transferase domain LL3_RS19785 PF02625 XdhC and CoxI family LL3_RS19785 PF13478 XdhC Rossmann domain LL3_RS19815 PF02590 Predicted SPOUT methyltransferase LL3_RS19835 PF00248 Aldo/keto reductase family LL3_RS19840 PF00583 Acetyltransferase (GNAT) family LL3_RS19845 PF18801 response regulator aspartate phosphatase H, N terminal LL3_RS19850 PF00491 Arginase family LL3_RS19855 PF00324 Amino acid permease LL3_RS19860 PF00202 Aminotransferase class-III LL3_RS19865 PF07853 Protein of unknown function (DUF1648) LL3_RS19865 PF13630 SdpI/YhfL protein family LL3_RS19870 PF01022 Bacterial regulatory protein, arsR family LL3_RS19875 PF00158 Sigma-54 interaction domain LL3_RS19875 PF13426 PAS domain LL3_RS19875 PF02954 Bacterial regulatory protein, Fis family LL3_RS19890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS19890 PF00672 HAMP domain LL3_RS19890 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS19895 PF00486 Transcriptional regulatory protein, C terminal LL3_RS19895 PF00072 Response regulator receiver domain LL3_RS19905 PF13180 PDZ domain LL3_RS19910 PF00753 Metallo-beta-lactamase superfamily LL3_RS19915 PF09648 YycH protein LL3_RS19920 PF07435 YycH protein LL3_RS19925 PF00672 HAMP domain LL3_RS19925 PF13426 PAS domain LL3_RS19925 PF00512 His Kinase A (phospho-acceptor) domain LL3_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LL3_RS19930 PF00486 Transcriptional regulatory protein, C terminal LL3_RS19930 PF00072 Response regulator receiver domain LL3_RS19960 PF00709 Adenylosuccinate synthetase LL3_RS19965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS19970 PF00772 DnaB-like helicase N terminal domain LL3_RS19970 PF03796 DnaB-like helicase C terminal domain LL3_RS19975 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LL3_RS20000 PF13477 Glycosyl transferase 4-like LL3_RS20000 PF00534 Glycosyl transferases group 1 LL3_RS20015 PF03948 Ribosomal protein L9, C-terminal domain LL3_RS20015 PF01281 Ribosomal protein L9, N-terminal domain LL3_RS20020 PF01368 DHH family LL3_RS20020 PF02272 DHHA1 domain LL3_RS20025 PF09991 Predicted membrane protein (DUF2232) LL3_RS20035 PF07875 Coat F domain LL3_RS20040 PF01638 HxlR-like helix-turn-helix LL3_RS20045 PF01368 DHH family LL3_RS20045 PF02833 DHHA2 domain LL3_RS20050 PF00892 EamA-like transporter family LL3_RS20055 PF02435 Levansucrase/Invertase LL3_RS20060 PF00251 Glycosyl hydrolases family 32 N-terminal domain LL3_RS20060 PF08244 Glycosyl hydrolases family 32 C terminal LL3_RS20065 PF00392 Bacterial regulatory proteins, gntR family LL3_RS20065 PF07729 FCD domain LL3_RS20070 PF05163 DinB family LL3_RS20075 PF07690 Major Facilitator Superfamily LL3_RS20090 PF00881 Nitroreductase family LL3_RS20095 PF01047 MarR family LL3_RS20100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LL3_RS20100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LL3_RS20105 PF01047 MarR family LL3_RS20110 PF13673 Acetyltransferase (GNAT) domain LL3_RS20115 PF00561 alpha/beta hydrolase fold LL3_RS20130 PF02517 CPBP intramembrane metalloprotease LL3_RS20135 PF00083 Sugar (and other) transporter LL3_RS20140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LL3_RS20145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LL3_RS20145 PF00356 Bacterial regulatory proteins, lacI family LL3_RS20150 PF03372 Endonuclease/Exonuclease/phosphatase family LL3_RS20155 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LL3_RS20155 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LL3_RS20160 PF12833 Helix-turn-helix domain LL3_RS20160 PF02805 Metal binding domain of Ada LL3_RS20165 PF01084 Ribosomal protein S18 LL3_RS20170 PF00436 Single-strand binding protein family LL3_RS20175 PF01250 Ribosomal protein S6 LL3_RS20180 PF06071 Protein of unknown function (DUF933) LL3_RS20180 PF01926 50S ribosome-binding GTPase LL3_RS20185 PF01568 Molydopterin dinucleotide binding domain LL3_RS20185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LL3_RS20185 PF00384 Molybdopterin oxidoreductase LL3_RS20190 PF06107 Bacterial protein of unknown function (DUF951) LL3_RS20205 PF06866 Protein of unknown function (DUF1256) LL3_RS20210 PF02195 ParB-like nuclease domain LL3_RS20210 PF17762 HTH domain found in ParB protein LL3_RS20215 PF13614 AAA domain LL3_RS20220 PF17762 HTH domain found in ParB protein LL3_RS20220 PF02195 ParB-like nuclease domain LL3_RS20225 PF02527 rRNA small subunit methyltransferase G LL3_RS20230 PF01134 Glucose inhibited division protein A LL3_RS20230 PF13932 GidA associated domain LL3_RS20235 PF10396 GTP-binding protein TrmE N-terminus LL3_RS20235 PF12631 MnmE helical domain LL3_RS20235 PF01926 50S ribosome-binding GTPase LL3_RS20240 PF14804 Jag N-terminus LL3_RS20240 PF01424 R3H domain LL3_RS20245 PF02096 60Kd inner membrane protein LL3_RS20250 PF00825 Ribonuclease P LL3_RS20305 PF04960 Glutaminase LL3_RS20320 PF13392 HNH endonuclease LL3_RS20325 PF01510 N-acetylmuramoyl-L-alanine amidase