LT978_RS19950 NONE
        rpmH    2197 ..    2220 +  -8.9  -5.09426   AGTATTATCAGCTTA          GGCCACTGA ATAATG TCAGTGGTC           TTTTTTCACATTAAG 100 25
        rnpA    2695 ..    2713 +  -4.7  -4.70613   ATAAGAAATCTTCGT             CAAAATA GCTCA TATTTTG             TTTTCTTCACGTTTT  73 18
     spoIIIJ NONE
LT978_RS00025    4236 ..    4264 +  -8.1  -5.84381   AAAGATAGCAGAAAA        CCGAAGTCCGGGT AAA ATCGGAACTTCGG        TTTTTTTATTGGTAA 100 11
        mnmE NONE
        mnmG NONE
LT978_RS19980 NONE
LT978_RS19985 NONE
        rsmG    8566 ..    8584 +  -2.5  -3.79687   GTAATTTAGACAGCC            TGATGTGA CAAT TC-CATCA             TATTTTCTGCAAAAT  51 37
LT978_RS19990 NONE
         noc    9531 ..    9551 +    -9  -5.50723   ATACCTAAATAAAAA            CTCTCCTG ATCAG CAGGGGAG            TTTTTATTTTAATCA 100 29
         soj NONE
LT978_RS20000 NONE
LT978_RS00055   11435 ..   11456 + -10.3  -5.38047   AGAGAAGCGTAAAAA           CCATCTTTT TAAA AAAAGATGG            TTTTTTATATACGTC 100 29
LT978_RS00070   13939 ..   13968 +  -2.3  -2.87211   GCCGTTGCTCTTATC       CTGTCTTTTTTTGT ACA ATAAATAAAG-CAG       TCTATGGAGAGAGGT  41 58
LT978_RS00075   14199 ..   14210 +  -3.6  -2.57672   GAGCCTACATCATAA                GGGC TGGC GCTC                 ATGCTTTTTCATATA  45 26
LT978_RS00080 NONE
LT978_RS19935 NONE
        ychF   17525 ..   17535 +  -2.6  -3.27476   ATATAAACTTGTGAG                 TAAT AGA ATTA                 TTGCTCCTTGCCCAT  46 75
        rpsF NONE
        ssbA   18410 ..   18426 +  -6.5  -3.45033   AGCCGATTGACATCT              CGGATGA TGA TCTTCCG              TTCTAATAGATTATC  63 3
        rpsR   18728 ..   18753 + -13.3  -5.71712   TAAGCCGAAAGAAAA         GAGCAAGAGCC TGCG GGCTCCTGCTC          TTTTTTTATATCAGC 100 38
LT978_RS00105 NONE
LT978_RS00110 NONE
         xth   20802 ..   20828 +  -8.8  -5.24129   ATTTATGATGAGATA         GCAGTAAGAG AAATCCA CTCTTGCTGC         TTTTTTATCACCAAA 100 33
LT978_RS00120   21796 ..   21814 +  -2.5  -3.93583   CGGAAAAAGTCTTGA            GC-TGAAA TGGG TTTCATGC             TTTATAACTAGATTG  53 26
LT978_RS00125   22233 ..   22254 + -15.9  -4.79174   GAAATCACAGTGTAA           CAGTGCGGG GGAA CCCGCACTG            TTTTATTGATTAAAT 100 26
LT978_RS00135   24690 ..   24715 + -11.2  -3.02186   TGTGAAAAAAGAAAA         GCAGCAG-GCC GCCTA GGCTCTGCTGC         TGATTTGTAAGATGT  79 10
LT978_RS00170   31685 ..   31695 +    -4  -5.02323   GTTTTAAATATGCAT                 TTGA AGG TCAA                 TTTTCTTTATGATGA  73 245
LT978_RS00180   34034 ..   34044 +    -4  -3.48593   GTTAGAGAGGGCTGC                 GATA TAT TATC                 TTATGTCAGGAAATA  51 92
LT978_RS00185   34619 ..   34649 + -14.3  -2.71364   TTTCGGCTGATCATA       TGTAAAAGCGATT ATATG AATCGCTTTTACA       TACTTAGAAACATGC  95 159
LT978_RS00200   36725 ..   36742 +  -2.1  -2.62788   ACTAGCCGATAGGCT             TATTTTT AACG AAAAGTA              TCAATTATGGTATAT  40 140
LT978_RS00205   37678 ..   37696 + -11.7  -5.40072   AATCATTAAGAAGGA             GCTGCCG TTCAC CGGCAGC             TTTTTTTAAAAAAGG 100 32
LT978_RS00210 NONE
LT978_RS00215 NONE
LT978_RS00220   39309 ..   39333 + -12.2  -5.94214   GCAGACGGAGTGAGT          GAGGGTTTCC GGAAA GGAAGCCCTC          TTTTTTTATTCTGTT 100 40
LT978_RS00225   40788 ..   40799 +  -4.4  -2.87132   GTGTAGTATAATTAG                GAAC GTAC GTTC                 TATATCGAGAGAGGA  48 40
LT978_RS00230   41335 ..   41359 + -14.4  -2.64616   TAAACAAAAAGTAAA          CAAGACAGCC AACGC GGCTGTCTTG          TGATATCCGTAAAAA  95 27
LT978_RS00260   48154 ..   48180 + -10.2  -6.25578   GCTCAAAAATAAGAA         GCAGCAAAGGAT TAA ATTCCTTGCTGC         TTTTTTTTATTTCAT 100 29
LT978_RS00270   49136 ..   49156 +  -4.7   -4.7219   ATTGCGGCGTCAAAA            GAGCAGT CGTCTAA GCTGCTC            TTTTCTATTCGTATG  72 203
LT978_RS00275 NONE
LT978_RS00280   52137 ..   52148 +    -3  -2.54434   ATTTTGAGGGAGGCG                TTCA GAGA TGAA                 GGTTATTTTCTTACA  41 15
        rplI   52608 ..   52624 + -15.1  -5.58454   ATACACAATGAAAAA              CCCGCCG ATC CGGCGGG              TTTTTTTCATGTCAG 100 40
LT978_RS00290 NONE
LT978_RS00295 NONE
LT978_RS00300 NONE
LT978_RS00305 NONE
LT978_RS00310 NONE
LT978_RS00315   59403 ..   59423 +  -9.7  -3.56594   GTGATTCTGCGAGCT            TTTGCGCCG TTT CGGCGGAAA            TTTGCAGCGGTTTCA  74 515
LT978_RS00325   59773 ..   59792 +  -9.2  -4.63218   CATCGAATAAGAAAA            GCCCTCGC ACGG GCGAAGGC             TTTTCTTAAAAGGAA  88 31
        dnaB   61532 ..   61553 + -10.2  -5.52384   CGGCAGGTGCGTAAA           GCCTCAAG CAATGT CTTGAGGC            TTTTTTTCATCCGAA 100 27
LT978_RS00340   62075 ..   62093 +  -6.7  -4.87626   AAATGACTGTCTGAA             GAACCTG GGATA CGGGTTC             TTTTTCATGTTAAAG  81 39
        purA   63607 ..   63630 + -16.8  -5.71712   AGAATTTGCAGCAAA          CAAGCCTCCG GTCA CGGAGGCTTG           TTTTTTTATGTAGGA 100 40
LT978_RS00350 NONE
LT978_RS00355   63984 ..   64025 +  -6.8  -3.27022   ATTGCTAACTCCTTA TTTGTCCTCGGAGGACCG CCACGATA CGGTTCTCCG-G-ACAAA TTACTGTAAGGTCCG  61 56
LT978_RS00360   64146 ..   64162 +    -3  -3.14132   ATAGAAAAGAAACAT             CTG-GCT CGGT AGCTCAG              TTGGTAGAGCAACGG  44 60
LT978_RS00365   64231 ..   64252 +  -8.7  -5.92399   AGCCACTTACCCAAA           CGCATCTGC AATA GTAGGTGCG            TTTTTTCTTTTGTTA 100 34
        walR NONE
        walK NONE
        yycH NONE
        yycI NONE
LT978_RS00390   70070 ..   70084 +    -7  -3.18031   ATCCGAAAATTCCGA               CGCCGC TGT GCGCCG               TGTAATTTTTCCAAA  62 6
LT978_RS00395   71378 ..   71397 +   -15  -5.59655   ACAGAAATAAAAAAG            CAGCCCGG ACAT CCGGGCTG             TTTTTTATTGATTTA 100 31
LT978_RS00400 NONE
LT978_RS00405   73654 ..   73676 +  -9.9  -3.81488   CTGCTAGTAAAGCCG           TGACTCCCC TTTTT GGGGAGTTA           TTATCTTTCAGGGGG  81 213
LT978_RS00410 NONE
LT978_RS00415 NONE
LT978_RS00420 NONE
LT978_RS00425 NONE
LT978_RS00430   79626 ..   79645 + -13.6  -5.72616   CAGATATAAACGAAA            GGCTGAGG AGCA CCTCAGCC             TTTTTTTGTATGGAT 100 32
LT978_RS00440 NONE
LT978_RS00445   82177 ..   82204 + -13.6  -4.37886   TAAATAATTGTTGAA        TAGGAGCAATCT AATT GGATTGCTCCTA         TTTTGTCAGCAGTAA 100 34
LT978_RS00450 NONE
LT978_RS00455 NONE
        rocF   86200 ..   86217 + -12.7   -5.7946   ATTATAAAATATGCG             CCTCCGC ACCT GCGGAGG              TTTTTTTGTTGCCAC 100 34
LT978_RS00465 NONE
LT978_RS00470   88073 ..   88093 + -10.4  -4.93661   AAGCTGTCATGAAAA            GAGGCCCG CACGC TGGGCCTC            TTTTGTTATTCATCT  93 29
LT978_RS00480 NONE
LT978_RS00485   91207 ..   91226 +  -6.4  -4.91109   GAACATTTCGGAAGA            GCTTGCCG CTTT TGGTAAGC             TTTTTATAATGAAAC  81 48
LT978_RS00490   91646 ..   91671 +  -8.3  -4.60889   GAGAAAACACGTAAA         GAGCCGGATGCT GAA AACA-CCGGCTC         TTTTTGCGCGTCATT  86 27
LT978_RS00495 NONE
        rlmH   92632 ..   92642 +  -6.8  -4.45577   ACTGTTTAGAAAGGG                 GGAG GTT CTCC                 TTTTGTCGAATTTAT  75 129
LT978_RS00505   94186 ..   94196 +  -2.6   -3.1236   CTAATAAATCTTTCA                 TATT CGC AATA                 TACTTTTGCAATTTA  44 259
LT978_RS00510 NONE
LT978_RS00515 NONE
LT978_RS00520   98008 ..   98018 +  -3.2  -3.37099   GTTTCTAAGGAAGAA                 GTAC AAA GTGC                 TCTATTTAGTATTTT  48 125
LT978_RS00525 NONE
LT978_RS00530 NONE
LT978_RS00535  100058 ..  100086 + -14.1  -3.11073   TAACAAACTATCTAA        TTTTGGGTTTGAT ATT GTCAAACCCAAAA        ATTTTCAATAACCTA  95 159
LT978_RS00540 NONE
LT978_RS00545 NONE
LT978_RS00550 NONE
LT978_RS00555 NONE
LT978_RS00560 NONE
LT978_RS00565  106836 ..  106863 +    -7  -2.66329   CGCAACCGTAAAAAA        AGAGCTCAGAGA ATTA TCTCTGAACTCC         ATATTCTTCACTTCA  59 43
LT978_RS00575  110679 ..  110703 + -12.9  -5.85244   TTGAATGGCTTCAGA          CGGTGTACTGC CAT GCAGTATGCCG          TTTTTTGTTTTGATT 100 37
LT978_RS00580  112056 ..  112075 + -13.6  -4.32201   TTCATATTTAAAAAA            GCCGCCAT ATGA ATGGCGGC             TTTTACATTAATTCC 100 41
LT978_RS00595  115231 ..  115254 +    -6  -5.71712   TATAAACAACCCGGG          TGCTGCAC ATGATGTC GTGCAGCG           TTTTTTTCTCTCCGA 100 82
LT978_RS00615  117893 ..  117903 +    -4    -3.484   GAAAATACAAATATT                 TCAT AGG ATGA                 TTATGGTATGATGAA  51 62
LT978_RS00620  119205 ..  119243 + -14.3   -3.5774   TTCGGGGCAAAAAAA  TAATAAAAAAGAATCCGC GCAC GCGGATTCTTTTTT-TTA   TTTAGAGGCTTGAAT 100 23
LT978_RS00630  121891 ..  121917 + -11.6  -5.36314   GAGGATGATGAAAAA         GAACTCGGCC GAAAACA GGCCGGGTTC         TTTTTTGCTGTTTTC 100 39
LT978_RS00635  123159 ..  123184 +   -12  -3.71998   CCTGATACGGCGCAC         GGCTCTTTCT CTTATC AGAAAGAGCC          TTCTCTTCATGCGTG  90 36
LT978_RS00640  124399 ..  124411 +  -3.4  -3.33815   AAAAGGATGGTAGCA                GATG ATCAA CATC                TTCATTGCCGAGGAT  48 21
LT978_RS00645  125019 ..  125038 +   -10   -5.9218   CCCTCAGCTTGTTCA            GCCAGTGT TTTT GCACTGGC             TTTTTTTATTATCTA 100 45
LT978_RS00655  126246 ..  126268 +  -8.5   -5.5112   GAAAGAAGCAGAGAG           GAGAGGATG ATCAA CATTCTCTC           TTTTTTATTGATAAA 100 16
        htpG  128317 ..  128341 + -15.8  -5.27477   GTATGACGCCAAAAA          GGAATCGCCC AGCGG GGGCGATTCC          TTTTTTGATTACAGT 100 35
        iolA  133545 ..  133572 + -11.3  -5.09259   TGATCAGACAGCCGG        CCCGGACGG CTTTGTGATT CCGTCCGGG         TTTTCTTTTACCATC  93 38
        iolB NONE
        iolC NONE
        iolD NONE
        iolE NONE
LT978_RS00705 NONE
LT978_RS00710 NONE
LT978_RS00715  141550 ..  141593 +  -8.9  -2.55351   GCATAAGCTGAGTAT GGAGTTCGGCGGAGCGGG GCAAAAAAG CCC-TTCAGCCGGACTCC CTTCATATCGAAAAC  67 35
        iolI NONE
        iolJ  143358 ..  143372 + -11.4    -5.626   TGATGAAAACGGAAA               CCGCCA AGA TGGCGG               TTTTTTTGTGCGGTG 100 38
        yxdJ NONE
        yxdK  145152 ..  145184 +  -2.8  -5.31877   ATAGCTCATTCTGTT      TCCCCTTGAT AACATGGATTTAC GTCAAGGGGA      TTTTTTATGCTGAAT  73 61
        yxdL NONE
        yxdM NONE
LT978_RS00750  148248 ..  148273 +    -9  -6.28401   AAGTGAACATGAAAA         ACGGCACAGT GTCATG ACTGTGCCGC          TTTTTTTATTTTTTA 100 35
LT978_RS00760  149771 ..  149799 +    -9  -3.64703   AGAGATAAAAACAAA       TGACAAAGC-CGG TATC TCGCGCTTTGTCA        TTTGCATGACCGGCC  74 33
LT978_RS00775 NONE
LT978_RS00780  151747 ..  151762 +  -3.2  -4.37737   TATAGGAAGAGAAGG              CGGAGA AACT TGTCCG               TTTGATTTTTCATTG  62 5
        yidA  152649 ..  152667 +  -7.4  -5.02476   GTGCTGAAAAAATAG             GCACCC CATCAGA GGGTGC             TTTTTTACGGCGTGT  85 26
LT978_RS00790  153709 ..  153723 +  -2.8  -2.78384   CATATGTTCAAAATT               CGGTTA TTC TAAACG               TATCCTAGGAAAAAG  42 74
        deoC  154423 ..  154453 +  -9.7  -3.95676   AGCGACTATTAATCA       GCATTGCGGAAGC CGAAA GCTTCCGCCATCC       TCTTTCTTTGTTGAT  83 29
LT978_RS00800 NONE
LT978_RS00805  157032 ..  157056 + -10.1    -5.626   GAATAAGACAAAAAA          GGCACATAC CTCATCA GTATGTGCC          TTTTTTTATGGCATG 100 35
LT978_RS00840  166172 ..  166196 +  -5.8  -5.52023   GAGTGAAGTGAAAAA         GCACCTACTCCA GTT TGGAG--GGTGC         TTTTTTCTTGCTAAT  89 30
LT978_RS00845  166773 ..  166783 +  -5.4  -3.69434   TCTGGGACAGGCTGA                 TGGA GCT TCCA                 TTTGACATTCATTGG  59 57
LT978_RS00855  170567 ..  170584 +  -4.7  -5.52384   TTCATTAAACAGAAG             ACCCTGC TGAT GCGGGGC              TTTTTTTAATGAGAA  85 33
LT978_RS00860  171620 ..  171636 + -11.5  -6.09196   AGCACCCGTATATAG              GCGGCCG TAT CGGCTGC              TTTTTTTGTTTTGGG 100 26
LT978_RS00865  172835 ..  172851 + -15.1  -5.72616   CCATAATACGAAAAA              CCGCCGG CAG CCGGCGG              TTTTTTTATATGAAT 100 35
LT978_RS00870 NONE
LT978_RS00875  180427 ..  180456 + -12.4  -3.79787   ATAACTAAAAACTTT       TTAAGAGAGACA ATTTTC TGTCTCTCTTAA        TTTAAATTCCTGTGA  90 40
LT978_RS00880  181105 ..  181118 +  -2.4  -2.71791   GCAACCTTTTTAACC               TCTG CACGTA CAGA                ATTTAGACACGACAT  40 50
LT978_RS00885 NONE
LT978_RS00890 NONE
LT978_RS00895  182501 ..  182519 +  -7.4  -4.07568   GTCTATTAATGTGAA             GAGAGGTT CCC GGCCTCTC             TTTTCACCCAAAACG  73 40
LT978_RS00900 NONE
LT978_RS00905  183379 ..  183397 +  -9.6  -4.63218   TAAATAAACAAATAA             GAGAGGTT CCC AGCCTCTC             TTTTCTTAAAGGACA  88 38
LT978_RS00910 NONE
LT978_RS00915 NONE
LT978_RS00920 NONE
LT978_RS00925 NONE
LT978_RS00930 NONE
LT978_RS00935 NONE
LT978_RS00940 NONE
LT978_RS00945 NONE
LT978_RS00950  188610 ..  188626 +  -9.4  -5.41746   AAATAAAAAAAGAAA              GCCTGC CGCGC GCAGGC              TTTTTTTACGCCGTT 100 35
LT978_RS00965  191852 ..  191873 + -13.1  -5.26875   ATAATGTACAGAAAA           GGATTTCCG CCAG CGGAAATCC            TTTTTTAATTAAAAC 100 37
LT978_RS00975  195425 ..  195447 +  -8.4  -5.55769   TATAAGAATGAAAAA           GCGCCTTTTT ATG AGAGGGGCGC           TTTTTTCTTGTGAAA 100 36
LT978_RS00980  195952 ..  195974 + -10.6  -5.14563   ACCTTCACGGTAAAA           GAGGCGTGGA TTA TCCATGTCTC           TTTTTTCATGGAGAA  93 28
LT978_RS00985  196770 ..  196800 + -11.9  -6.09196   TATCAATAAAAAAAA       GCGATATCACTCC AAAAC GGAGCGGTATCGC       TTTTTTTCTTTTACC 100 32
LT978_RS00995  199497 ..  199515 + -10.3  -5.95539   TCTGTAAACAGAAAA             GACACGC TGATC GCGTGTC             TTTTTTTATTTCCAG 100 34
        galE  204697 ..  204721 + -10.8  -4.81814   AGGTGTAAAAAGAAA          GAGACCTTCA AATGA TGAGGGTCTC          TTTTGTTATGATGAT  91 33
LT978_RS01030  206634 ..  206653 + -11.4  -5.88565   CTAAATAAAAAGGAT            CCCTCTGC CGGC GCGGAGGG             TTTTTTTCTTATGCC 100 33
LT978_RS01035 NONE
        ugpC  208911 ..  208930 +  -9.3  -5.58454   GCTCATAATGCAAAG            CCGGACA GCTGGA TGTCCGG             TTTTTTTGATGTAAC 100 33
LT978_RS01045  209850 ..  209869 +   -15  -5.58209   TGATGAAATAACAGA            GCCTCCGC ATAT GCGGAGGC             TTTTTTTCAGTTTAA 100 30
LT978_RS01055  213116 ..  213132 +  -5.1  -2.79117   AGTCAGGAGGTCTAC              CATGGGG TCA CTTCATG              ATCTTTGGTTTGTAC  50 8
        cydB NONE
        cydD NONE
        cydC  217565 ..  217584 + -10.7  -5.63504   CGATCAGAACATAAA            CAGCCGC AAACGA GCGGCTG             TTTTTTTGTGCGGTT 100 27
LT978_RS01075  218489 ..  218515 +  -8.7  -5.46706   AATATGAATAAAGAA         AAGGCGTCTTC ATAGG GAAGGCGCCTC         TTTTTGTTTTAACCT 100 30
LT978_RS01085  221170 ..  221187 +  -7.7  -5.99154   TTAGCTCAAAAAAAA             CAGGACG CGAT TGTCCTG              TTTTTTTATTTAATA 100 37
LT978_RS01155  235096 ..  235114 + -11.7  -5.46629   TGTCCGCATCCCGAA             CAGCCGG CTGAT CCGGCTG             TTTTTTTACGGTCTT 100 201
LT978_RS01160  237230 ..  237249 +  -6.6  -2.93348   AAAAAGCCTGAGTAG            TTATGAAA GCGA TTTCATAA             TATGATGTTACTAAC  58 47
        licB NONE
        celB NONE
LT978_RS01175 NONE
        licH  240680 ..  240697 +  -8.4  -5.43514   AGAGCAGTAAAAAAA             CCCGGA TTCGCT TCCGGG              TTTTTTGCTTATTTT 100 40
LT978_RS01215  247659 ..  247682 +  -7.5  -5.94713   TGATCAAATGAAAGG          GCAAATGCT ATAACC GGCATTTGC           TTTTTTTTATGACAT 100 38
LT978_RS01220  248426 ..  248465 + -19.4  -5.20783   ACGATTGACCCGTCA  CAACCAGCCGGACCGC TATTATGT GCAGTCCGGCTGGTTG   TTTTTATGTTTAGGT 100 41
LT978_RS01225  249547 ..  249578 +  -9.5  -6.25741   CAGGTGTGATGAAAA      CGCTTGTGAAACCG TTGAC CGGCT-CACAAGCG      TTTTTTTTATTATTT 100 42
        celB  252827 ..  252842 + -11.8  -5.42259   GAAACATAAAAAAAA              CGGGCG CTTT CGCCCG               TTTTTTTAACGCTGG 100 32
LT978_RS01245  254527 ..  254565 +  -3.3  -3.72576   AGGATATCATTTATA  GCG-TGGAAAGAGGG GGAAAAGAAAA CCCTC-TTCCATCGC  TTTAATACGGGACAA  53 39
LT978_RS01270 NONE
        thiM NONE
        thiE  259482 ..  259504 + -10.5  -5.03994   CGGCGCTCCAAAGCA           GGGCTGTCC CGATA GGGCGGCCC           TTTTTCTGTGTGCGC  93 11
        efeB  261158 ..  261177 +   -10  -5.40072   CTGCTGGAATCGTGA            CACCTTCC ATAT GGAGGGTG             TTTTTTTAAAAAAAC 100 26
LT978_RS01295  261854 ..  261878 +  -8.6  -3.64866   AAACGTTAGTAAAAA         GCCCTCTTTGC ATCA GCG-AGAGGGC          TTTGCCATATAGTGT  74 32
LT978_RS01315  264635 ..  264646 +    -3  -3.33315   GCTACAGAGAAATTA                TGAT GTAT ATCA                 TTATGGGGATATTCA  46 103
LT978_RS01320  265030 ..  265053 +  -2.4  -2.82516   GTGTCATAACCGTTT          CTTTCCGCGTC CCG GGGG-GGAAAG          TGTAATGGTGGAAGG  41 32
        galT  266800 ..  266823 +    -8  -6.00086   CTCTACCGGAAAAAA          GCCCCATCCC ATAA GGGACGAGGC           TTTTTTTTATCCTCT 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD  271527 ..  271550 + -13.2  -5.33866   AGGAATAAAAAGAAA          CCCTCTTCGT TCAG GCGAAGAGGG           TTTTTTGTGCCTTTA 100 33
LT978_RS01365  272577 ..  272598 + -10.9  -5.24129   AAACATAGACTGAAA           CCCCTTTTC TGAC GAGAAGGGG            TTTTTTATCGGAAAA 100 28
LT978_RS01370  273969 ..  273991 +  -9.1  -5.95539   CAATTCTTAATGTGA           GACGGCTCG TTTTT CGGGCTGTC           TTTTTTTGTTTAGAG 100 31
        nfsA  274824 ..  274843 +   -10  -5.88197   AGAATTAAGAAAAAA            CCTCTCCT GACC GGGAGAGG             TTTTTTTATGTTTCA 100 33
LT978_RS01380  275993 ..  276014 + -11.6  -3.77953   TTAATCAGAAAGAAA           CCCTGCTG ATGCTC CAGCAGGG            TTGTTCGGTTATTCA  86 37
LT978_RS01390 NONE
LT978_RS01395  280132 ..  280151 +  -9.4  -6.06723   AACCCGGAATAACGC            GTCTGTTT CGAG AAACAGAC             TTTTTTTTTGAAAAC 100 29
LT978_RS01400 NONE
LT978_RS01405  283225 ..  283247 +  -3.4  -2.50789   TTCTTCAAACGAAAG           CCTATGATTC CAG GAATAAAAGG           AGTTGTTTTCTCAGT  43 86
LT978_RS01410  283504 ..  283525 + -12.3  -4.10507   AAAAAAATGAAATAA           TCCCCCTCG ATCA TGAGGGGGA            TATTTATTTTATTTT  95 26
LT978_RS01420 NONE
LT978_RS01425  285442 ..  285464 +  -2.7  -5.24989   ATGGGTTTTTACGCA          GG-CAGGCAG AGAC TTGCCTGATC           TTTTTTACTATATAC  73 5
LT978_RS01430 NONE
LT978_RS01435 NONE
LT978_RS01440  287636 ..  287660 + -17.9  -5.27779   TAAACGGTTTTTTGA          GGCGCTTCCGC CCG GCGGAAGCGTC          TTTTTTGATGTTCCG 100 38
LT978_RS01445 NONE
LT978_RS01450 NONE
LT978_RS01455  289887 ..  289915 +  -5.4  -5.07011   TTATAAAGAAAAAAA       GCCAATC-CTC TGTCAAGT GAGCGATTGGC        TTTTTGATTTATCTC  78 35
LT978_RS01465 NONE
LT978_RS01470 NONE
LT978_RS01475 NONE
LT978_RS01480 NONE
LT978_RS01485 NONE
LT978_RS01490 NONE
LT978_RS01495 NONE
LT978_RS01500 NONE
        rfbB NONE
        rfbD NONE
LT978_RS01515  300908 ..  300928 +  -9.8  -5.33785   CGGTAGCGCACAAGA            CGAAGACA GCGGA TGTCTTCG            TTTTTTGTGCTGGTT 100 35
LT978_RS01520  301588 ..  301605 + -11.3  -5.60993   TAATCCGGGATGAAA             GAGGCTG ACAA CAGCCTC              TTTTTTTATGCGCAA 100 38
LT978_RS01525  303056 ..  303106 + -15.1  -3.60792   GGTATAAGTGTTATC CGCAAAGAGATTTTGC-ATCAGTT ATAT AGCGGATCGCAAAATTTCTTTGCG TTTCCAGATTGCAGC 100 34
        pruA  304814 ..  304841 +  -4.9  -4.64844   TTAATCTTTCGGAAA        TAGCGCGAT GAAAAAGAGA GTCGCGCTA         TTTTCTCTATATGAG  70 37
LT978_RS01535 NONE
LT978_RS01540  308008 ..  308030 + -11.2  -4.32131   CGGATAAGAAAAAAA           GCCCTTCGCT TAA AGCGGCGGGC           TTTACTTTGTTTTCC  88 34
LT978_RS01550  310734 ..  310752 + -10.4  -4.53163   AATGTAAATTTTTAA             CACCTTAT ATC ATAAGGTG             TTTTCTAATATATAG  89 64
LT978_RS01555 NONE
LT978_RS01560 NONE
        bacC NONE
LT978_RS01570 NONE
LT978_RS01575 NONE
LT978_RS01580  316745 ..  316765 + -15.5  -5.25699   CTTCATTACAAGAAA            CATCCCGCT GAG AGCGGGATG            TTTTTATTATATGCT 100 15
         pta  319679 ..  319700 + -12.3  -5.60993   CTGTAATCCGCAAAA           GCCGGTCTT TACG AGGACCGGC            TTTTTTTATAGAAAG 100 35
LT978_RS01605 NONE
LT978_RS01610  322598 ..  322616 +  -8.8  -5.95286   TCGGCACGCAGGAAA             GCTTGGAC TGA GTCCGGGC             TTTTTTATTTTTGGT 100 15
LT978_RS01615 NONE
LT978_RS01620 NONE
LT978_RS01625 NONE
LT978_RS01630 NONE
LT978_RS01660  329813 ..  329833 +  -8.9  -5.26875   TGCATTTTTACGACA            GCCTCGCCC GAT GGGTCAGGC            TTTTTTGCTTCAAAA 100 44
LT978_RS01665 NONE
LT978_RS01670  331830 ..  331854 +  -9.3  -5.16038   TTTTTTATGAAAAAA         CCAGGC-CGC GATGAA GCGGGCCTGG          TTTTGTTTATTGTCT  91 59
LT978_RS01680  334171 ..  334185 +  -3.4  -4.66535   CAATGATCTTTTCTT               CGGCTG CGC CTGTCG               TTTCTTTTACGGCTT  69 146
LT978_RS01690 NONE
LT978_RS01695  335654 ..  335696 + -11.4   -3.5394   GATACAGAATCAGGA CATGGAAAGTCCCGAGCC GAACCAA GACTCGGGGTTTTTCATG TTTACGCGGAGGTTT  85 107
LT978_RS01700  336142 ..  336176 + -12.8  -5.00616   CTTGAGGAAGACGCG     GATTAAGCCCGGCGCG CAA TGCACCGGGCTCAGTC     TTTTTTGCCGAGCCA 100 20
        speE  339282 ..  339302 +    -9  -5.00616   AAATAAAAACGTACG            GCGCAGGA GCGAA TCTTGCGC            TTTTTTACAGGAAAG  91 35
        speB  340214 ..  340239 +  -7.5   -5.1764   AAATAGAAAGAATTT         CCCCCCGCT-TG AAA CATGGCGGGGGA         TTTTTATATTGTATA  89 35
LT978_RS01720  340611 ..  340624 +  -8.1  -3.38348   GAAATGAAAGAAAAA               CCCCT ATTG AGGGG                GTTTATTTATATATG  71 43
LT978_RS01760 NONE
        argS  346695 ..  346718 +  -8.2  -5.83822   GTAATGATGATCAAA          GGACAAAGTC TTCG GGCTTTGTTC           TTTTTTTTGCATATA 100 37
        narK  348057 ..  348087 +  -2.6  -4.16842   GTGAGTGCAAATCAA       GTCACGTTAC AATATACATAC GCAACGTGAC       TTTCTTCGAGGTGAG  55 74
LT978_RS01775  348829 ..  348848 + -10.8   -4.6902   ATTGACTGAAAAAAA            CAAGGACA GCGG TGTCCTTG             TTTTTCAGCTTGTGA  90 32
LT978_RS01785  350181 ..  350201 + -11.2  -5.52384   ATGAAAATGCCGAAC            CCGGTTCT TAAAC AGAACCGG            TTTTTTTGATGACGC 100 15
LT978_RS01790 NONE
        narH  355485 ..  355495 +  -2.4  -3.64369   GCTTGTCATTTTCAG                 GCGG CCC CGGC                 TCTTGTTTCTAACTT  48 3
        narJ NONE
        narI  356762 ..  356780 + -10.3  -5.31275   AAACGCACGTAAAAA             TCCCCCT GCAAG AGGGGGA             TTTTTTATGGTGAAA 100 29
LT978_RS01810  357527 ..  357550 + -13.2  -4.90217   GAAGTGTCATCATAA          TCCTTTCCGC TCGT GCGGAGAGGA           TTTTTCATATGTTTA 100 26
         cls  359114 ..  359131 +  -8.5  -4.12902   CGCGGTTATTTTCCG             GCGTTTT ATAA AAAACGC              TTTTAAAACTCCTTG  79 15
LT978_RS01820  360941 ..  360979 +    -8  -5.74122   TGAATAATGGAAAAA   GGATAGACGAGCGGGGGC CGG GCAGCCTCCTGTCTATCC   TTTTTTTATGTAGTC 100 34
LT978_RS01840  365773 ..  365796 + -17.4  -4.65263   TATAGAAAGAAGCGG          GCCGCCGGCG CATA TGCCGGCGGC           TTTGTTTTCGCACAT 100 36
        rpoE  366613 ..  366640 + -17.2  -4.70107   TCATAAGAGTGCTAC        GCTCCCTTTCAA GAAA TTGAAAGGGAGC         TTTCTTATTTTCATC 100 121
        pyrG  368374 ..  368401 +  -8.4  -5.28176   GAAGTAATAAAAAAA        GACTTGCCTCCT TTAA AAGCGGCAAGTC         TTTTTTCTGCATCAG 100 34
       spo0F NONE
LT978_RS01865  370527 ..  370550 + -12.4  -4.68545   TGTAACATCCATAAA          CCGCCTGACA GCAT TGACAGGCGG           TTTTATGTCTTACCT 100 46
         fsa  371274 ..  371307 + -12.5  -2.99568   AATAAGGGGCGAAAA     GG-GCGGCAAACCGGT TGC ATCCGTTTGCCGCACC     CTTATGTTTTCCTGT  91 36
LT978_RS01875 NONE
        glpX  373868 ..  373896 + -17.6  -4.07568   CCGGCCATAAATAGA        GAAAAGCGGGAC GGAAA GTCCCGCTTTTC        TTTTGCAAAAAAGAG 100 31
         rho  375534 ..  375562 +  -4.6  -3.25204   GAAGCAGGCAAACCT        TTCATCATCAGC CCGCC GCTGATGAAAAA        TGTATTTGCAAATGC  52 4
        rpmE  375895 ..  375918 +   -14  -5.38047   AATAGATTTTACAGG          CAGGCAAGAA TTGC TTCTTGCCTG           TTTTTTATGTCCATA 100 42
LT978_RS01900  376569 ..  376588 +  -2.8   -5.4477   CCCTTTTCATGAAAA            CATCGG TAAAAAAT CCGGTG             TTTTTTTGACGGTTT  76 41
LT978_RS01905 NONE
LT978_RS01910  379577 ..  379595 + -14.6  -5.27477   ACTGCATAATGAAAA             GCTCCCTG TTT CAGGGAGC             TTTTTTGATTAGAAT 100 32
        prfA NONE
        prmC  382711 ..  382736 + -16.9  -4.65916   CACATCATGAAAAAA         GCCCGCCG-GTG ACG CACACGGCGGGC         TTTTGTTACAATGGA 100 31
LT978_RS01935  383048 ..  383059 +  -2.2  -4.78848   TCTGCTGATTACGCT                TCTG TAGC CGGA                 TTTTGTCTTTGCAGC  64 19
      spoIIR NONE
LT978_RS01950  384807 ..  384833 + -12.4  -4.43307   TCCACTTATTAAAAA         GTGTTGTCCACA GTT TGTGGATAACGC         TTGTTTTATTAAAGG 100 62
LT978_RS01955 NONE
LT978_RS01960  386607 ..  386625 +  -4.6  -5.59655   AGATACGTAAAAAAA             GAAACG AAGATGC CGTTTC             TTTTTTCTTCATTTA  84 40
LT978_RS01965  387210 ..  387220 +  -2.4  -3.06696   TAATAAAAAGGACAA                 GCAC ACT GGGC                 TGTCTTCGCCCAGCC  43 114
        rpiB NONE
LT978_RS01975  388259 ..  388277 +  -4.6  -2.94464   TATATGAATGCGAAT             GATGAAAA TAC TTTTCCTC             TATAATGTTCGTGTT  49 24
        glyA  389666 ..  389690 + -14.3  -5.77632   TTAATAAGGAAGAAA          CCCGCCGGA ACCTTAA TCCGGCGGG          TTTTTTTATGATTTT 100 37
         upp  390423 ..  390445 +  -8.5  -5.93809   GAACCAAATAAATCG           GAAAACCTC ATTCA GGGGTTTTC           TTTTTTTTATCCAGA 100 30
        atpI NONE
        atpB NONE
        atpE  392303 ..  392318 +    -9  -4.82901   ATGTCTGATAAGCAG              GCCGTT CTGA AACGGC               TTTTTATCAGCAGAG  88 107
        atpF NONE
LT978_RS02010 NONE
        atpA  394956 ..  394982 + -13.2  -4.57569   TAACCCTTAGAAGAT         GAGAGAAAAAGG TTC TCTTTTTCTCTC         TTTTTACGCAAATGA 100 38
        atpG  395860 ..  395872 +  -6.9  -3.59979   TTACCGAAATTGTCG                GCGGT GCA GCCGC                TTTAGAATAGAAAGA  67 3
        atpD NONE
LT978_RS02030  397756 ..  397785 + -15.9  -5.10064   CAGGAAACTAAAAAA       GAATCCTTCTCGG CTGT CTGAGAAGGATTC        TTTTTCTATATTAAC 100 30
LT978_RS02040  398727 ..  398739 +  -4.7  -4.10855   ACCAATTTTTCTTCA                CCCGC TTG GCGAG                TTTTGACGAAGTTTT  63 83
LT978_RS02045 NONE
        murA  400908 ..  400930 + -11.4  -5.75599   TAATGGCTGTAAAAA           CAGTATGTCA ATC TGGCATACTG           TTTTTTTATGGTTTA 100 38
      spoIID  402123 ..  402144 +  -7.3  -5.41143   TATATGGCGAAAAAA           TAGACGCTT TCAT GAGCGTCTG            TTTTTTTGAAAACTA  91 23
LT978_RS02060  403074 ..  403108 +  -9.4  -5.27335   AGTTCATTAGCGAAA     TAAGAAAAGGTGCCGT TTA GCGGCCCTTTTTTTTA     TTTTTATTTAACAAA 100 23
LT978_RS02065  404077 ..  404093 +  -9.4  -5.95539   AATAGGTTAAAAAAG              GACGCC CGCGC GGCGTC              TTTTTTTGTTTAGAA 100 36
LT978_RS02070  404317 ..  404333 +  -5.8  -5.40072   TCGCAATGAAACATA              GAGTCC GAAGA GGGCTC              TTTTTTTAAACCGCA  85 25
        fdhD NONE
        moaA  406250 ..  406271 +  -9.4   -5.4756   GGCGGATGAAGAAAA           GCTTGCCC GGACAA GGGCAGGC            TTTTTTATTCACATT 100 32
LT978_RS02085  407572 ..  407596 + -11.6  -5.61596   ATATATAATTTTTCT          TAACCATCTG ATCAG CAGATGGTTA          TTTTTTTATGCACAT 100 33
LT978_RS02090 NONE
LT978_RS02095  408452 ..  408469 +  -9.9  -5.18726   TGAAACACAGCAAAA             GCCCAAA ATAT TTTGGGC              TTTTTGTTATGAGAA 100 49
        ureA NONE
        ureB NONE
        ureC  411186 ..  411204 +  -9.5   -3.4096   TTTTAATCCCTCTCC             GGCCGGT TTCCC GCCGGCC             TGTTTACCCTCTATT  77 35
LT978_RS02115  411709 ..  411728 +    -8  -2.56715   TGATGTAATGAATCA            TCTCTTTT GTTA AAAAGAGA             TGGGTTCATGCCGCT  62 13
LT978_RS02135  415766 ..  415786 +  -6.9  -4.98255   TGCTTTATTAAAAAA            GAGCTGA CGCGCGA TCAGCTC            TTTTTGTCATTCAAA  83 30
LT978_RS02150  417752 ..  417775 + -11.8  -4.44797   AATCTTGATCCCAAA          GCGTCTATCA GCTC TGATAGGCGC           TTTTCATATTGCTGC 100 39
LT978_RS02155  418238 ..  418263 +  -9.7  -6.08563   GCCAAACATACAAAA         ACCGGCAGTCTG TGA CAGAC-GCCGGC         TTTTTTTTATATATT 100 11
        ftsW  420180 ..  420206 + -10.9  -3.74615   TGAAGCGAGAAAAAA        CGCCCGG-GATA TTTC TGTCTCCGGGCG         TTCTGTCTGTTTATA  84 41
LT978_RS02180 NONE
LT978_RS02185  423992 ..  424012 +    -9  -5.74122   CAGGCGCGAAAAAAA            GAGACGGG CTCTC CCTGTCTC            TTTTTTTGTGTAATG 100 41
LT978_RS02190  425600 ..  425618 + -17.4  -4.95155   GGCCGAATAAAAAAA             GCCGGGGG CTG CCCCCGGC             TTTTTGTCATATCAG 100 31
     spoIIID  427878 ..  427899 +  -3.5  -5.31275   CGTTCAGCAGCCGTA           GCGCCTGAC GTCT GCCGGGCCC            TTTTTTCTCCTCCGG  75 25
         mbl  429068 ..  429090 +  -8.5  -5.71712   GAGCTGATGATAAAA           CCTCATTCT GAAAA AGAATGGGG           TTTTTTTCTGTCAAA 100 34
LT978_RS02215 NONE
LT978_RS02220  431244 ..  431264 +  -2.6  -4.25873   CCCAATACCTTTTTG            TAAAAAGG GAGGG CCTCTTTA            TCTTTTTTCTGGGCG  59 407
        fabZ  432577 ..  432596 +  -7.9  -4.52589   ATAAAAACAAACGAA            TGGGCTT ATAAAA AAGCCCA             TTTTGTATAGAAAGG  80 37
        mscL  433030 ..  433052 +  -9.1  -5.39755   TAAGGCACAAAAAAA           GGCTGGATG ATTAA CGTCCGGCC           TTTTTTATGATTATA 100 38
LT978_RS02245  434012 ..  434030 +  -3.1  -3.60002   TAAAAGCAGCCCAAA             CGGATAA CGGCT TTTTCCG             CTTTTTGCTTTCATA  51 38
         ssb  434500 ..  434515 +    -9  -5.60993   CCTCCTTCCCATTCG              CCAGTC GAAA GACTGG               TTTTTTTGTGCGGGA 100 87
LT978_RS02255 NONE
LT978_RS02260  436363 ..  436388 + -15.5  -4.82855   AAGGACGACATAAAA         GACCGGCTCTT CCGA GAGAGCCGGTC          TTTTTGCGTTTAATG 100 103
LT978_RS02275  441119 ..  441142 +   -11  -5.28683   ATATGCAACATAAAA          TCCCGCAGGCT CCT GGCC-GCGGGA          TTTTTTAATCTTCCT 100 28
LT978_RS02280 NONE
LT978_RS02285  442763 ..  442775 +  -5.5  -4.40561   ACAATAATGTCACAA                TGGGC GCG GTCCA                TTCTTTTTAAGGAGG  69 34
LT978_RS02290  443724 ..  443738 +  -5.6    -2.924   ATGATAATAGCGGTA               AGCTGC CCA GCAGCA               ATTTCTAAACGGTTG  53 185
LT978_RS02295  445092 ..  445112 + -15.4  -4.46926   TTCTGTCACTTGAAA            GGCCGGCG GTCCG CGCCGGCC            TTTTATCATACAATC 100 28
LT978_RS02300  445974 ..  445994 +  -7.6  -6.06723   TGATACAAGGCAAAG            GAGACGGT TAATC ACTGTCTC            TTTTTTTTTAGGGAA 100 58
LT978_RS02305 NONE
LT978_RS02310 NONE
LT978_RS02315  449090 ..  449101 +    -3  -3.89617   AGGAGGTAAAAATAG                TTCA TGGC TGAA                 TTTGAATTTATAAAT  53 32
LT978_RS02320  449565 ..  449593 +  -7.4  -5.03314   AGAAGAATTAATTGA        CCTTGATTGGCT AGTGA AGCCTTTCAAGG        TTTTTTACAAATGAA  85 60
LT978_RS02330 NONE
LT978_RS02335  451590 ..  451615 +  -6.9  -5.72616   AAAAATCACATGTAA         CACTTGG-AGCT CTA AGCCACCAAGTG         TTTTTTTGTATGCCT 100 26
LT978_RS02345 NONE
LT978_RS02350  453444 ..  453459 +    -9   -5.0065   GGCCAAAATAAAAAA              GCACCT GTCC AGGTGC               TTTTCTTTATAAATG  91 30
         ggt  457328 ..  457347 +  -7.8  -4.72386   AAAAGACTCAAAAAA            GCCCCCTT TCGA AAGGGGTC             TTTTTGACTAGTTTC  84 489
LT978_RS02390 NONE
LT978_RS02395 NONE
LT978_RS02400  461671 ..  461694 +  -4.6  -5.86965   CCATAAATGATAAAA          CTGCCT-CTCT TAT ACAGCAGGCAG          TTTTTTTTCATAGCT  93 35
        alsS  466030 ..  466053 +  -2.4  -2.72144   GCACTCTGCGCACCA          TGACCTGTTT TCTA AAACAGCCCA           ATTTAAAAGGAGTGA  40 40
        budA  466853 ..  466880 +  -4.9  -5.30616   GAATAAAATAAAAAA        GAAAGCCTC ATTTTTCTCG GGGGCTTTC         TTTTTATTTGGCTGA  79 35
LT978_RS02425  467558 ..  467586 + -11.1  -4.48263   TCAAGAAAGAAAAAA        CGGATTTCGCG CTGAATT TGCGAAATCCG        TTTTGATATTATGTC  90 113
        pgsB NONE
        pgsC NONE
LT978_RS02490 NONE
LT978_RS02495  481374 ..  481394 + -11.2  -5.74122   TCCGAATCCAGTAAA            GAATGCCC ATATC GGGCATTC            TTTTTTTGTGTGCTC 100 74
LT978_RS02500  482717 ..  482741 + -17.3  -5.46706   GCTTCCGTAAAAAAA          GACGTCAGAGA GTG TCTCTGACGTC          TTTTTCTTTTACCGT 100 31
LT978_RS02520  487244 ..  487258 +  -2.8   -2.8032   TCAGAATCAAATCGG               CGGA CAGTTCA TCCG               TAATATTCAGTTTTA  42 8
LT978_RS02525  488896 ..  488926 + -10.5  -3.97812   TCGGGATATTGAATG       CGGACTCTGTC AGAAAAGAA GACAGGGTCCG       TTTCATATTGATTCT  85 150
        manA  493640 ..  493663 + -12.6  -6.23545   ATATATAAAACCAAA          CTTAATCCCA GCTC TGGGATTAAG           TTTTTTTTATTTGGA 100 33
LT978_RS02550  496424 ..  496447 + -13.2  -4.24342   GAAAGTATAAAAAAA          GGGCTGAAGT GTAT GCTTCAGCCC           TTTCTTCATGCAAAA 100 31
        tagD  499223 ..  499252 + -15.2  -3.47345   TATACAGATGATAAA       GAAGTACTCCCT CCGGAT AGGGAGTACTTC        TTGTAATATAAGGTT 100 55
LT978_RS02570 NONE
LT978_RS02575  503108 ..  503133 +  -7.1  -5.28481   AATAAGTGCAAAAAA         GCATAATTTAAC CAC GTTAA-TTATGC         TTTTTTGCTTAAGTG  91 40
LT978_RS02580 NONE
        tagH  505680 ..  505713 + -15.5  -3.20367   AAAGTAAAGATCACA     TAAAAAAAGCTGCCG GATT CGGCAGCTTTTTCTA      TTCGTCAGCTTCTTC 100 34
        wecB  507960 ..  507997 + -13.9    -3.671   CAGCCTTTTACAGAA   TAA-AAAAAACTCTGCAT CAT ATGCAGAGTTTTTTATTA   TTTCAGGCTTTCTTT 100 23
LT978_RS02605 NONE
LT978_RS02610 NONE
LT978_RS02615  513092 ..  513113 + -14.5  -6.28401   TTTTTTTCATGGAAA           CAGACCGGT TCAT ACCGGTCTG            TTTTTTTATTTTTTC 100 41
LT978_RS02620 NONE
LT978_RS02625 NONE
LT978_RS02630 NONE
LT978_RS02635  518001 ..  518022 +   -13  -3.04517   TTGTCTTCAGGCTCT           CGGCAGCC CGGCTC GGCTGCCG            GTTTTGGAAAGGGGT  91 49
LT978_RS02640 NONE
LT978_RS02645 NONE
LT978_RS02650 NONE
LT978_RS02655  522192 ..  522220 +  -7.3  -5.38497   GGGTATATTGAAAAA        TGCGCAATCCCAT TAA AAGGGAAAGCGCA        TTTTTTGATTTGCGT  91 10
LT978_RS02660  523422 ..  523443 +  -9.5  -5.30189   GAAAAATTAAAAAGA           GCAGATCAT GCGA ATGGTCTGC            TTTTTTGCTATTCTC 100 31
        degS NONE
        degU  527538 ..  527559 + -10.2  -5.43866   AGTCATGTATGAGAA           GACTTGCC ATAATA GGCAAGTC            TTTTTTTACAGCTTC 100 39
LT978_RS02685  528478 ..  528499 +  -5.1  -5.64873   AAAACTAAGTGAAAA           TCTCCGTTT TCAA GGGCGGAGA            TTTTTTATTATTAAA  85 33
LT978_RS02690  529986 ..  529997 +    -3  -3.83026   AGAAAACATGATACA                GTAT ACTC ATAC                 TTTCCTATGAGGAGC  51 49
LT978_RS02695 NONE
LT978_RS02700 NONE
LT978_RS02705 NONE
        flgM NONE
LT978_RS02715 NONE
        flgK NONE
        flgL  534818 ..  534840 +  -4.1  -5.52986   CAATATATAAAAAAA          GCGA-CTCAC AACA GGGAGATCGC           TTTTTTTACTAAAAT  83 56
LT978_RS02730 NONE
        fliW NONE
        csrA  536109 ..  536129 +  -6.9  -6.09196   TTATTACTTAACTTA            TCCTCAC AAAAAAA GTGAGGA            TTTTTTTATTTTCAA 100 8
LT978_RS02745  537267 ..  537286 +   -10  -6.32017   GGTTAATGACGGAAA            GATCCTGG TTCT CCAGGGTC             TTTTTTTTATTTCTT 100 35
LT978_RS02750 NONE
        fliS NONE
        fliT NONE
LT978_RS02765  540180 ..  540201 + -12.3  -4.20084   GTATGTTCTTCACTA           GACCTGCTG CAAG CGGCAGGTC            TTTTGCCTGCGTCCT  95 25
        raiA  540952 ..  540973 + -12.3   -5.1104   AATAAACCCATCCAG           CCTTCCGTG AACG CGCGGAAGG            TTTTTCTCTATCTTT 100 36
        secA  543659 ..  543685 +  -4.2  -2.83772   ATGAAGCGAACATGA         CCGGGTCTGCGT CTT ATGGCGCCCCGG         ATCTTTTAATGAGGT  48 51
        prfB  544818 ..  544841 + -11.8  -5.66684   GTCGTAATCCGGGAA          CACACC-TGCC TTT GGCAAGGTGTG          TTTTTTTATCCGTTC 100 34
LT978_RS02785 NONE
LT978_RS02790  546213 ..  546235 +  -8.4  -5.29782   AAAATAACAGAAAAA           CCTTGCCTGT TAT AGGGGCAAGG           TTTTTTCTCGGTCTG 100 34
        ftsE NONE
        ftsX  547999 ..  548019 + -15.5   -5.5943   CGTGTATAAAAAAAA            GCCAGTCTG ATA CAGACTGGC            TTTTTTTAATGGTTT 100 32
LT978_RS02810  551014 ..  551045 +  -6.7  -4.56607   ATTTGTAAAATAAAT      GAAA-AGGAGGCGT TTTTT GCGTCTCCTGTTTC      TTTTGTCATTCGTAA  77 28
LT978_RS02815 NONE
LT978_RS02820  553007 ..  553038 +  -8.7  -5.75342   CAGCATTATAAAAGA      GCCCGG-TGCCG CTAACAACA CGGCGGCCGGGC      TTTTTTTTACGGCCG 100 30
LT978_RS02845  559558 ..  559582 + -11.6  -5.24129   ATATGAAATAGAATG          CCTGCTTTTA CGCCA TAAAAGCAGG          TTTTTTATACAAAAA 100 49
        uvrB NONE
        uvrA  564588 ..  564621 + -19.1  -3.64685   GTAATAGATCAATAA     CAACAGCCCAAAACT CATC GGTTTTGGGCTGTTG      TTGTTACAGGCTTTT 100 37
LT978_RS02865 NONE
LT978_RS02870 NONE
LT978_RS02875 NONE
LT978_RS02880  567078 ..  567096 +  -8.1  -5.37043   AAGGATAAAAAACAA             GCTGTCC CGAGA GGGCAGC             TTTTTTATGTGCGGT 100 33
LT978_RS02885  571046 ..  571084 + -10.4  -5.71712   TAGCAAAAACATACA  CCTGCCGATCGGTCAGA AGAAAA TCTGAC-GGTCAGCAGG   TTTTTTTCTGTAACA 100 38
LT978_RS02890  571880 ..  571907 + -14.3  -4.06502   GGCAGATCAAAAAAA        CATCTCCAACC CGTAAC GGTTGGAGATG         TTTCATTTCACCCTG 100 140
        hprK NONE
         lgt NONE
        ppaX NONE
LT978_RS02925  577685 ..  577708 + -10.2  -5.66684   AAAACGAATGGAAAA          CCCCGCAGAT TAAC GTCAGCGGGG           TTTTTTTATGACTTG 100 13
LT978_RS02935 NONE
        hisG NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE  585100 ..  585121 + -14.5  -5.24796   CTGAGTAAAAACAAA           CCTCACGGA GAGA TCCGTGAGG            TTTTTATTCTGTCAA 100 33
LT978_RS02975  587097 ..  587113 +    -8  -5.45802   CTTTATGAATAGAAA              GCAGCT GAAAA AGCTGC              TTTTTATTTTGCAGC 100 48
LT978_RS02985 NONE
LT978_RS02990  589651 ..  589664 +  -2.3  -3.28712   AAACGGAGGATATTT               GTGGG AAAA CACAC                TTCTGAACAGAAAAA  45 141
LT978_RS02995  591105 ..  591136 +  -6.7   -5.9873   TGATATATTAGAATA      AAACCGATTCTTT CTATAT AAAGAGTCGGTTC       TTTTTTTTATCATAA 100 25
LT978_RS03000  592928 ..  592950 +  -7.7  -4.84602   TAATGAATAAGACAA           GGGCCTTCT ATCCC GGAAGGCTC           TTTCTTTATTTGTAT  84 38
        trxB  594191 ..  594216 +    -9  -5.51165   TTAATGAATACACTT         TGGCACGGAT TCCAGT ATCCGTGCCC          TTTTTTTGCGATTTT 100 144
LT978_RS03010 NONE
        rapZ NONE
LT978_RS03020 NONE
        whiA NONE
LT978_RS03030 NONE
LT978_RS03035  598731 ..  598750 +  -9.2  -5.46276   TTCTCTGCAAAAAAA            CGGCCTCC GCAG GGAAGCCG             TTTTTTGTATGTGTT 100 51
LT978_RS03050  601298 ..  601313 +  -3.2  -2.71924   ACAGTCAAAGGAGGA              TGCAGC TGAC GATGCA               ATTTACCGGCAGATA  43 17
LT978_RS03055  602906 ..  602939 +  -9.6  -5.16151   CGGGATAAATTCAGA     TACGGCCTGTCC ATGAAAAAGC GGACGGGCCGTG      TTTTTATTCGGTTTC  91 33
LT978_RS03065  604110 ..  604136 + -14.6  -4.24002   GGGTTGAAAGAAGAA         CATCCATTTCCT CAA AGGAGATGGATG         TTTTGCGGTTTCCAG 100 181
LT978_RS03080  607752 ..  607778 + -15.3    -5.055   TAAAGCATAAAAAAA         CCTGCAAGAGA CATCA TCTCTTGCAGG         TTTTTTGGGCATTAC 100 31
LT978_RS03095 NONE
LT978_RS03100  612818 ..  612853 +   -12  -3.61902   TGCCGTTAAACGATG    CAGGATTATGCTGC ACGAGGAC GCTGCATAATCCTG     TTGTGTATAATCAAA  90 129
LT978_RS03105  613030 ..  613054 + -14.4  -5.60556   AGAAGATAGGAAAAA          CCTCGCAGAT GATAA ATCTGCGAGG          TTTTTATTTTATCTT 100 50
LT978_RS03120  615183 ..  615214 +  -8.2  -5.02357   ATGCCGAAGAAAGGT      AAAATACCCACCTCA GGA TGA-GTGGGTATTTA      TTTTGTTTAATTATC  91 24
LT978_RS03130  615895 ..  615921 + -10.3  -5.28831   TTTGTACAAGATAAA        TTAGC-CAGCTC AATC GAGCTGAGCTAA         TTTTGTTTTATTGCT 100 27
LT978_RS03140 NONE
LT978_RS03145  617140 ..  617170 +  -3.9   -5.7946   AAGCTTAATGAAAAA       GACAAGGGTTTCG GCATG TGCCGCCCTTGTC       TTTTTTTATTGAACA  89 70
LT978_RS03150 NONE
LT978_RS03155  617999 ..  618016 +  -9.8  -5.43487   AAATAAGAGAAAAAA             CCCGGC AGCTTG GCCGGG              TTTTTTGTATCCTTT 100 35
LT978_RS03165  619315 ..  619327 +  -3.3  -2.82138   AAAACCCGGTAACGG                CGGTT TTT ACCCG                ATTCTATCATTTTTC  44 29
LT978_RS03170  619938 ..  619964 + -12.4  -4.97461   ATGAAATGTATGAAC         GAAACCCAGTAA AGG TTACCGGGTTTC         TTTTTCATGTTTGTT 100 42
LT978_RS03190 NONE
LT978_RS03195  623981 ..  623999 + -13.1  -3.10894   CTCGGCTCTGCTGTG             GGCGGCG TTTTC CGCCGCC             TTAGATGCTGGTCGT  95 82
LT978_RS03200 NONE
LT978_RS03205 NONE
LT978_RS03210 NONE
LT978_RS03215 NONE
LT978_RS03220 NONE
LT978_RS03225 NONE
LT978_RS03230  632313 ..  632338 +  -2.3  -3.31792   TGCGCTCGAAAATCA         GCGGTGATGCC CAAT GACCGCGCCGC          TTGTGAGCGTGATCG  45 9
LT978_RS03235 NONE
LT978_RS03240 NONE
LT978_RS03245 NONE
LT978_RS03250 NONE
LT978_RS03255  637278 ..  637294 +  -3.7  -3.30159   CGAAAGGGGAGAAAA              CATGG ACAGCCG CCATG              TTATGAGCCGATTAA  49 3
LT978_RS03260  638232 ..  638256 + -12.2  -5.00611   CGGCACGAAGGAAAA          CCTTCCGCTT TGAAT GAGCGGAAGG          TTTATTTTGTTTCTC 100 13
        rpoN  639867 ..  639892 + -11.8  -3.42503   ACGGTACAGCTGAAA         CCTCCCCGAG CCAAAC CCCGGGGAGG          TTCTCCGTGTTACGG  85 28
LT978_RS03280 NONE
LT978_RS03285  643733 ..  643752 +  -6.4  -5.41746   GATCTAGAGCAGCAT            GGGAAGCT TTCA GGCTTCTC             TTTTTTTGCACCCTT  89 34
LT978_RS03290 NONE
LT978_RS03295 NONE
LT978_RS03300  646807 ..  646833 + -15.2  -4.96848   TGACCGATAAAAAAA         CAAACCCCGGTT TGC GGCCGGGGTTTG         TTTTTATATAAACGC 100 31
LT978_RS03320  652828 ..  652847 + -12.2  -5.52384   CAATAAATAAAAAAA            CTCTTGCC CCGC GGCAAGAG             TTTTTTTAATGAACG 100 35
LT978_RS03330  654800 ..  654816 +  -3.7  -4.08767   TTAATTTTAAAAGAG              TTTGTCG TAT TGACAAG              TTTTGAACCGCTGAA  59 79
LT978_RS03340  656478 ..  656498 + -14.1   -5.7946   AGCTGAGCAAAAAAA            GCAATGTGC CGC GCACATTGC            TTTTTTTATTCGCCG 100 35
LT978_RS03350  659256 ..  659281 + -14.1  -2.92425   GAAAGCGTTTTACGA         CAAAAGTCCGC TCCG GCGGGCTTTTG          TCTGTCACCTTCATT  95 39
        cggR NONE
         gap  661650 ..  661674 + -12.2  -4.65895   AATGAAAGCGGACAA          GGGAAGGGGA CGGAC TCCCTTTCCC          TTTTTCCATGAGAAC 100 93
LT978_RS03365 NONE
        tpiA NONE
        gpmI NONE
         eno  666733 ..  666755 + -19.2  -5.67063   AAGTAATGTAATGGA           CGCCGGGAGA ATA TCTCCCGGCG           TTTTTTTATGGTCCC 100 35
LT978_RS03385  668177 ..  668190 +  -8.1  -5.86465   TGAAGGAATAAAAAA               CAGGC TTCG GCCTG                TTTTTTTATATTATT 100 30
LT978_RS03390 NONE
LT978_RS03395 NONE
LT978_RS03400 NONE
LT978_RS03405 NONE
LT978_RS03410 NONE
LT978_RS03415 NONE
LT978_RS03420 NONE
LT978_RS03425 NONE
LT978_RS03430  677516 ..  677539 + -17.4   -4.9218   GAATGGTAAACGAAG          GGGCGCCGGT ATCA GCCGGCGCCC           TTTTTATCATAAATC 100 39
LT978_RS03440  679936 ..  679959 + -11.7  -3.99805   ATTCAATAAAAAAAC          CCCCG-CGCC AATCA GGCGGCGGGG          TTTCCGTTTTTAAAA  90 32
LT978_RS03450  681760 ..  681787 + -10.5  -5.63645   TCCTGACTTAAAAAA        GCAGCGCCCGG TTATCT TCGGGGGCTGC         TTTTTTCTATTTTCG 100 35
       opuCA NONE
LT978_RS03465 NONE
       opuCC NONE
       opuCD  686031 ..  686049 +  -8.1  -5.88565   GCGGCATGAAAAAAA             CGCCTTG CGGGT CAGGGCG             TTTTTTTCTTATGGC 100 32
LT978_RS03485  688020 ..  688032 +  -4.1   -2.5655   CTCGCGGTGATGTCA                TGAGG AGG CTTCA                ATTGATATGAATCAG  45 23
LT978_RS03490 NONE
LT978_RS03495 NONE
LT978_RS03500  690327 ..  690349 +  -8.5  -5.77856   GCCTCATGAAAAAAA           GCATTCTTC CGCGT GAAGGATGC           TTTTTTTGATTTCTT 100 32
LT978_RS03505 NONE
LT978_RS03510  691867 ..  691878 +  -5.8  -3.10545   TCAAAAGGGGGAAAC                CGGT CATG ACCG                 TGCTTTTACGATATA  57 17
LT978_RS03515 NONE
LT978_RS03520 NONE
LT978_RS03525  694706 ..  694730 +  -9.4  -5.03994   GGCGTCAGACAAAAA         CAAGCCCTGCA CGCC TG-AGGGCTTG          TTTTTCTGTATAAGA  91 8
LT978_RS03545  696509 ..  696521 +  -5.5  -4.94262   GATGTACACCGATAC                GGCGT GAC ATGCC                TTTGTTTTTCATGTA  76 79
        secG  696826 ..  696846 +  -7.6  -5.29445   GCAATGTTTGTATAA            GGTCTGAT TTAAT ATCAGGCC            TTTTTCTTGTTGAGA 100 42
LT978_RS03555 NONE
         rnr  700030 ..  700056 + -10.2  -4.41348   AAGTAAATGCGAAAA         GCAAATGGGGCA AAA TGCTCTGTTTGC         TTTCTTTCGCAAGCC  89 35
        smpB NONE
        ssrA  701170 ..  701221 +   -11   -3.0579   TCCATACATAACGCC GAAACCGCAGTGTTATC-AAGGCTT TCA GAGCTTTCGATGGCACTGCGGTAAC ATTTTGGCAACATTT  80 34
LT978_RS03580  703211 ..  703226 +  -3.2  -2.74012   CCGGGACAACGGACA              GGCACT AAAA AGTGCG               TACTTCCCCTCATCC  44 18
LT978_RS03585  704143 ..  704162 + -12.1  -5.52384   GATGAATATAAAAAA            CCCCCGC AAAGTG GCGGGGG             TTTTTTTAATGCGGA 100 41
LT978_RS03595 NONE
LT978_RS03600 NONE
LT978_RS03605 NONE
LT978_RS03610 NONE
LT978_RS03615 NONE
LT978_RS03620 NONE
LT978_RS03625 NONE
LT978_RS03630 NONE
LT978_RS03635  712259 ..  712279 +  -9.8  -4.94902   CAAATCCGATTTTGA            GCAGAAAC TAAAT GTTTCTGC            TTTTTCTGCTGCTTG  93 15
LT978_RS03655  716040 ..  716073 +  -5.5  -3.62046   ACTGATTTCGAGATA     TTATTGTTGCGAAAA GAAT TTTTTGTAACTATAA      TTATTACAGAACTGA  59 250
       azoRB  716807 ..  716830 + -13.8  -5.47159   TGATCTTAAAAAAAA          CCTCCCCGCC GTAC GGCTGGGAGG           TTTTTTATATTAAAG 100 38
        csoR  718344 ..  718354 +  -4.6  -2.79796   AAATGTTTTGAAATA                 CCCT ACA GGGG                 TATGGTAACATGAAG  48 45
        copZ  718613 ..  718635 +  -5.5  -5.20781   GTCGTATAAGGTTTA          TCGCGCTGCG GGAA CG-GGCGCGG           TTTTCTTTTATCATA  81 32
LT978_RS03680  721105 ..  721132 +   -15  -5.45652   CAGAAGGTGAAAAAA        GACAAAATCGGC TGAT GCCGGTTTTGTC         TTTTTTATTGACACT 100 11
LT978_RS03685  723441 ..  723466 +  -6.2  -5.79595   TCTTGGTAAAATAGA        GAAGCGG--GCC ATCC GGCATCCGCTTC         TTTTTTATTTTAAAA 100 86
LT978_RS03690 NONE
LT978_RS03695  724580 ..  724603 + -13.2  -5.23765   GCACGGCAAAATAAA          GAGCCTGCTCC ATA GGAGC-GGCTC          TTTTTCTATTATTTG 100 27
LT978_RS03705  726249 ..  726270 +  -8.8  -5.47218   AGAACAGTAAAAAAA           CCGATTTC ACAAAC GAAATCGG            TTTTTTTGCATAACG 100 31
LT978_RS03710  728732 ..  728754 + -13.5  -4.99861   GGCTTATTCGTATAA           GCCCTTTGC TGAGT GCAAAGGGC           TTTTTATCATTAGTA 100 26
LT978_RS03715 NONE
        cysI  732572 ..  732594 +   -15  -5.61881   GCAGCTTGCGAAAAA           GCCTGTTTTC AGA GAAAACAGGC           TTTTTCTTTTTCCGG 100 140
LT978_RS03725  734826 ..  734847 +  -8.7  -5.15969   AGATGAATAAAAAAA           GTCCGGC ATCTGTTC GCCGGAC            TTTTTTAGATTACGG  91 31
LT978_RS03735  736402 ..  736419 +  -9.1  -5.30616   TGTTCTAAGAAAAAA             CAGCCCT TTAC GGGGCTG              TTTTTCTTTACATAA 100 33
LT978_RS03775  744107 ..  744127 +  -9.7  -5.87996   ATGAAACATGAAAAA            TCCCTCCAT ATA ACGGAGGGA            TTTTTTTATTGCTTA 100 30
        sspJ  746849 ..  746872 +   -11   -4.2535   GCTGACCATATAAGA          CGGGTAGGGC GAAC GCTCTATCCG           TTTTCCATCTAATAT  88 36
LT978_RS03795  748672 ..  748695 +   -14  -5.95539   TCGGTATGACAAAAA          GACATCTCAC GTCT GTGAGATGTC           TTTTTTTGTTTGCGG 100 32
LT978_RS03810 NONE
LT978_RS03815 NONE
LT978_RS03820  753844 ..  753865 +    -8   -5.7946   GTAAGATGAAAAAAA           CGCAGAGCC ATTCC GGC-CTGCG           TTTTTTTATTGCGCC 100 32
LT978_RS03840 NONE
LT978_RS03845  756849 ..  756881 +  -9.3  -4.78848   GCTCTGACAACGTGA      GAAAAACGAGAAG AGATGTC CGTCTCGTTTTTC      TTTTCTGTTTCCCCG  90 68
LT978_RS03850 NONE
LT978_RS03855  759419 ..  759433 +  -5.8  -3.27525   AACGGTGATTACGAT               TCTTTT TAA AAAAGA               TTGAGTTTGGACGCC  58 7
LT978_RS03860  760386 ..  760421 + -16.2  -5.48063   ATGATGTAAAAAAAA    GCCCTGGCATATGGGGA AGT TCCCCTTGTGCC-GGGC    TTTTTTGTGTTAAAT 100 32
LT978_RS03870 NONE
LT978_RS03875 NONE
LT978_RS03880 NONE
LT978_RS03885  765162 ..  765185 +   -11  -5.61596   GAATAACGTTTTGTT          CAGCCGGC AGCAGCAA GCCGGCTG           TTTTTTTATAGAGAT 100 35
LT978_RS03890  766599 ..  766625 + -12.3  -5.60993   AGATTTTTCGTGAAA        CGCC-CTGCGCC GTCC GGTGCAGCGGCG         TTTTTTTATGCGAAG 100 39
LT978_RS03895 NONE
LT978_RS03900  767842 ..  767855 +  -5.2  -3.12327   GCACAAGGGAAGATC               GGCG CTTTTA CGCC                TCTTCCCTATACGCA  52 44
LT978_RS03905 NONE
        liaF NONE
        liaS NONE
LT978_RS03920  771293 ..  771303 +  -6.8  -4.16016   AGGGACGGGGTCATT                 GGGA CAT TCCC                 TTTGTTCCGAAATCC  71 73
LT978_RS03940 NONE
        fumC  776680 ..  776706 + -15.2  -3.36327   AAGCATAAAAAGAAA         GAACGGCTGCAG TCA TTGCGGCCGTTC         TTCTAAATAAACTGC 100 33
LT978_RS03955  778199 ..  778211 +  -5.5  -4.19735   ATGTGAATCGCCGTT                TCTGC ATA GCGGA                TTTGATTTTCGAGAA  66 297
LT978_RS03970  781636 ..  781660 + -10.8  -5.22794   GAGCGCATAAAAAAA          GCTGAACCTT CAACT GAGGTTCAGC          TTTTTTCGTCATTCT 100 39
LT978_RS03985  784996 ..  785021 +  -7.5   -5.4833   ATCTGGAGATGAACC         G-GCCGGAGCTG TTA CCGCTCCGGTTC         TTTTTTGTTCCGTGA 100 43
LT978_RS03990 NONE
LT978_RS03995  786789 ..  786819 + -11.2  -5.14563   AAAAAACAATAAAAA       GCTTTCGGCATC AAAGAGA GGTGCCGGAAGC       TTTTTTGCTGAAACG  93 299
LT978_RS04015  789849 ..  789867 +   -16  -5.47159   GATGATATAAAAAAA             TCCCGCGG CAT CCGCGGGA             TTTTTCTTTGTTAAA 100 106
LT978_RS04040  793984 ..  793995 +    -3  -4.04482   TTTAAGATGAAAGAA                GAAA AGGG TTTC                 ATTTTTTTTGCCGAA  55 317
LT978_RS04050 NONE
LT978_RS04055 NONE
LT978_RS04060  799425 ..  799445 + -10.4  -4.72272   GATCACATGCTGAAA            GCGCTCCT TCATC AGGGGCGC            TTTTTCATGAAGCAA  91 39
LT978_RS04065 NONE
        gcvH  800340 ..  800383 +  -4.1  -4.25104   TCGGATAGCAAAGGG GCCAT-TTGGACACTCTATCTG TAA CGGG-AG-GTGTCTAAAATGGC TTTTGATAAACAAAA  62 41
LT978_RS04075  800621 ..  800639 +   -11  -4.46215   CTGGTGTTAACAGTT             GGCGGTGA ATT TCACTGCC             TTCTTTTTCAATCTG  90 31
LT978_RS04080 NONE
LT978_RS04085 NONE
LT978_RS04090  802056 ..  802083 + -11.4  -5.07652   GGCCTTTTTCAATAA        GCCTTTCTGC TCATTTTT GCAGAAAGGC         TTTTCTTTTGCGGAG 100 261
        metN NONE
LT978_RS04100 NONE
        metQ  804667 ..  804687 + -16.9  -5.46629   TGAATAAAGCGAAAA            CCCCGGATG AAT CATCCGGGG            TTTTTTTCGGGTATT 100 34
LT978_RS04110  805201 ..  805213 +  -2.6  -3.53012   ATTCGAAAGGATTCA                GGGG CACAC CCTC                TTTGGCCGGAGCAGC  47 98
LT978_RS04115  805478 ..  805493 +  -8.2  -5.19879   TCGGTCAGTAAAAAA              GGGTGG ATTT CCGCCC               TTTTTCTGTTTCAAA 100 30
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB  810845 ..  810862 + -14.1  -6.08342   CGGTTAATAGTAAAA             CCCCGCC ATAT GGCGGGG              TTTTTTTGTTTATTG 100 34
LT978_RS04155 NONE
LT978_RS04160  813922 ..  813941 + -11.4  -5.13648   TATAAATAAGAAAAA            CCGGAGCT TAAG GGCTCCGG             TTTTCTTTATGTTTA 100 32
LT978_RS04175 NONE
LT978_RS04180 NONE
LT978_RS04185 NONE
LT978_RS04190 NONE
LT978_RS04195  820826 ..  820855 +  -5.1  -3.37487   ACATTTAACAGTTTC       GTATTAT-GGGTGG GCA CCACCTGATAGTGC       TGTTTCAAAATGTCA  54 234
        ugpC  822637 ..  822659 +  -9.8  -3.48822   CCGTATATTGAAAAA           GGGAGCCTGA TGA TGGGGCTCCC           TTATCACTTCTTATG  79 30
        allC NONE
LT978_RS04220 NONE
LT978_RS04225  827611 ..  827630 +   -15  -5.24003   GGATAAGAATCAAAA            GCCTCCGG GTAT CCGGAGGC             TTTTTGCTTTTTCTT 100 35
LT978_RS04230  828697 ..  828720 + -16.8  -4.44548   TTCTGAATGTACTTA          GGATGCAGGG GGAC CCCTGCATCC           TTTTCATTGAGTATG 100 111
LT978_RS04240  832495 ..  832518 + -15.4  -5.75599   TTCTGAAATAAAAGA          GCCGATTCTC TGAT GAGAATCGGC           TTTTTTTGTCGTTTG 100 13
LT978_RS04245 NONE
LT978_RS04250 NONE
LT978_RS04255 NONE
LT978_RS04260  836145 ..  836184 + -10.2  -5.10461   AAATAAAATACTATG  TCCCCTCTTACA-AGCATA CAT TGTGATATGTAAGGGGGGA  TTTTTCTTGCCTAGA  93 106
        yunB  836953 ..  836985 + -13.5  -4.35327   AAAGATAAATAAAAA      CACACAGCCGCAA TCTTTCC TGGCGGCTGTGTG      TTTACTTTTTCCTGC 100 29
        lipA  839078 ..  839100 +  -7.8  -5.31275   GATAAGCCGAAAAAA           CCCAAAAC GCCGCAG GTTTTGGG           TTTTTTGTGATGGAG 100 41
LT978_RS04280 NONE
LT978_RS04285 NONE
LT978_RS04290  840824 ..  840844 +   -14  -4.01227   ACATCTATAAAAAAG            GGACGGCC ATGAC GGCCGTCC            TTATTCTGTATTTCT 100 31
        yutH  842713 ..  842727 +  -2.8  -3.37513   AAGAAAGGTGGAGTT               TCTCTT TGG AAGCGA               TTCGTATTGGACTGT  46 222
LT978_RS04305 NONE
        thrC NONE
        thrB  846015 ..  846038 + -11.8  -5.35224   ATAATGATAAAAAAG          CGTTCTTCTC ATCA GAGAAGGACG           TTTTCTTTTTCTGGA 100 37
LT978_RS04320  848095 ..  848115 + -13.3  -4.54821   GTAAAAATAAAAAAA            CCAGGCTGT CAT GCAGCCTGG            TTTTATGATTAAAAT 100 37
LT978_RS04330  848871 ..  848892 + -14.5  -5.18726   GGGCTCTTAAAAATG           GCCGCTGAT CGCA ATCAGCGGC            TTTTTCTTATCAGCC 100 31
LT978_RS04340  850476 ..  850495 +  -7.8   -5.4505   CCGATGTTTTAATCA            GAGGCTCC GAAC GGGGTCTC             TTTTTTATTGCGCCC 100 29
LT978_RS04345  851831 ..  851862 + -20.4  -2.87132   TTATTTAGTAAACGA      TAAAAGCTCCCTGC ATAT GCAGGGAGCTTTTA       TGTATGAAAAACGGG 100 33
        dapF NONE
LT978_RS04355  853340 ..  853370 + -15.6  -4.57341   ATCTGTTTAATAAAA       GCAAAACCCGCT CAACAGA AGCGGGTTTTGC       TTTTTCAAAGAGGTT 100 124
LT978_RS04370  855440 ..  855456 +  -2.4  -3.64703   TATTTTCTTTAATTA              TTTTAT GGCGG ATAAAA              TTTAGCTCGGGAGAG  48 4
LT978_RS04375  855883 ..  855913 +  -7.7  -2.87931   CGACCAATAAATAAT       TGCTCTTTTTGTA CAAGC TGCAAAAAGAGCC       TCTCTCCCAAATACA  62 44
LT978_RS04380 NONE
LT978_RS04385 NONE
LT978_RS04390 NONE
LT978_RS04395  859070 ..  859090 + -11.3  -6.56554   TATTTAATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTTTTATCTT 100 34
LT978_RS04405  860471 ..  860497 + -11.6  -5.57729   TGTTTAAATAAAAAA         GAGTCTGTGCCG GTA TGACACAGACTC         TTTTTTATATTATTT 100 30
LT978_RS04415  863033 ..  863056 + -15.4  -3.68435   AGTTTAAATTCTTCT          GAAAACCCGC AGCC GCGGGTTTTC           TCTTCTTTTAAAAAA 100 24
LT978_RS04420  863358 ..  863395 +  -4.1  -2.77222   ACGTTGACTTTTTTA   CCGCCCCCGA-GGTAC ACTGAAA GTGCTGTAGGGGGTGG   ATGTTTGTGATTAGT  45 50
LT978_RS04425  863726 ..  863745 +  -9.4  -5.71712   CAAATGTTTTAAGCC            GCTTTCTT ATTC AAGAAAGC             TTTTTTTGTGTCGCG 100 29
LT978_RS04430  864467 ..  864488 + -14.5  -4.65895   GTAAAAGAATAAAAA           CGCTTCAGC ATCC GCTGAAGCG            TTTTTACATAAAGAA 100 29
LT978_RS04440  866613 ..  866634 +   -13  -5.37593   GAAAGATAACAGCAT           CCCGCTGC CTTGAT GCAGCGGG            TTTTTTGATTTCCAA 100 32
LT978_RS04445  868073 ..  868092 + -10.7  -5.00895   TGTTCTGTAAAAAAA            GGCTCCC GGAAAG GGGAGCC             TTTTTGTATGCTGAG  93 31
LT978_RS04455  869429 ..  869450 +  -8.1  -5.71712   CTATATAGTTCTTAG           GTACCTTAT TAAA ATAAGGTGC            TTTTTTTATATCAAA 100 51
LT978_RS04460  870520 ..  870539 +  -3.7  -2.53894   GTGTTTTGATTTGGA            TATGATT GTCTTG AATCATA             ATTGATAATGATAAT  44 97
LT978_RS04465  871345 ..  871355 +  -3.2  -2.78327   TGATTTATGCGTTGA                 TGGC GGC GCTA                 CTTTAGGCGTTTGAT  44 1
        dhbC NONE
LT978_RS04475 NONE
LT978_RS04480 NONE
LT978_RS04485 NONE
LT978_RS04490  882562 ..  882583 +   -13  -4.83169   AATGTAATAAGAAAA           GCCTGCCG TTATTT CGGCAGGC            TTTTTATGCGGACAT 100 34
LT978_RS04510  886486 ..  886517 +  -4.3    -4.128   ATGAATGAAGAAACG      GAGCGCCTGATTC AATCAA GAAGACGGCGCTC       TTTCTATGTAAGGGT  61 45
LT978_RS04515 NONE
        essB NONE
        essC NONE
        esaA NONE
        essA NONE
LT978_RS04540  897012 ..  897031 +  -9.3  -6.02919   CAAAGAATTTTTGTA            GAGCAGC TTTCAC GCTGCTC             TTTTTTTGTTTGTAC 100 25
LT978_RS04545  897707 ..  897722 +    -6  -4.19953   AAGAAGCTCAGTCTA              GGCCAC TCAT GCGGCC               TTTTCCGCTTACATA  68 25
LT978_RS04550  898206 ..  898216 +  -2.4  -3.65046   TTCACATGACAATAG                 GAGG AAA CCGC                 TTGTTGAAATCAAAG  48 150
LT978_RS04555  899378 ..  899393 +  -3.2  -2.57463   AAAGAAAAGCGGAGG              TGTGGG TATG CCTGCA               ATTGTGGGACCGATT  43 80
LT978_RS04560  899603 ..  899631 + -19.7  -5.34555   TGATTGGTTTAACGC        GTGACAGCCTCCT TTT AGGAGGCTGTCGC        TTTTTTGTAGTATAA 100 22
LT978_RS04565  899943 ..  899960 +  -4.7  -2.82623   CGAAAACGGTTTACC             GCGTCCC GTCC GGGGCGA              TAATTGTAAAACAAG  50 41
LT978_RS04570  900408 ..  900427 +  -3.6  -3.17723   AGGGCAAAACACTGT            TTGTCATT TTAC AATGCCAA             TTCACTTACAAGTGG  48 42
LT978_RS04575 NONE
LT978_RS04580  902535 ..  902557 +  -9.2  -5.58179   ATAGAAAACAAAGCG           GCCTTTCC TATCTCT GGAAAGGC           TTTTTTGTTGTGATA 100 37
LT978_RS04585  904300 ..  904323 +  -3.1  -4.33907   TATGACATGCAAAAA          GACCACAAT GCGGGG GTTGCGGTC           TTTTCGGTGTTTGTC  60 452
LT978_RS04595  904831 ..  904846 +  -7.6  -5.97575   AAAATTTCTTAAAAA              GACTTG GAAA CAAGTC               TTTTTTTTGTGCATT 100 29
LT978_RS04600 NONE
        comX NONE
LT978_RS04610  908419 ..  908438 + -12.2   -4.7373   TTTTATCACCAAATC            GACTTGGC AGAA GCCAAGTC             TTTTTAATAAAATGG 100 44
LT978_RS04615 NONE
LT978_RS04620  909532 ..  909566 + -11.6  -4.61231   TTATAACAAAATAAA     CAAACAGCCGGA ACCCTGAATCG TCCGGCTGTTTG     TTTTTACAAATATGA 100 27
LT978_RS04660  915804 ..  915830 + -11.7   -4.9725   GTATATAGATGAAAA        GAGTTCCGGCAC CAGG GTGC-GGAACTC         TTTTTGTGTGGCAAT 100 29
LT978_RS04695  924007 ..  924034 + -17.2  -5.06414   TTTATAATAGCATAA        TGGCTAGCTTAC CTGT GTAAGCTAGCCA         TTTTTGTTAAGACAG 100 6
        kapD  928550 ..  928564 +  -4.2  -3.34398   GCCCATTCTGAGCCG               TCCGCT GTA AGCTGA               TCTTTCAGCCGGGCA  50 123
LT978_RS04735  931831 ..  931846 + -11.8  -6.11243   TGCACCCCTTAAAAA              CCGGCG GTTC CGCCGG               TTTTTTTTATTGAAT 100 29
LT978_RS04745  933318 ..  933341 +  -2.4  -4.18983   CAAAAGAATCGTGGT          GTCTCCGT AAATGGAA ACGAAGAC           TTCTTATTTATCTGA  54 16
LT978_RS04750  934535 ..  934575 +    -4  -4.06491   CATCCAAATAAAAGG GGGGGAATACTA-GAAAGC CTTC GTAATCATAGTATACCCCC  TTTATCTGCGCTTAA  59 63
        yugI  935099 ..  935122 +  -9.6  -5.90231   TAACCATCAAAAAAA          GCACCGGATA TGTA TGTTCGGTGC           TTTTTTTATGTTTAT 100 38
LT978_RS04765  936776 ..  936798 +    -9  -5.80248   GTAATAACATAAAGG           GGGGCGGCCG GAT TGGCAGCTCC           TTTTTTTCTGTGTTA 100 37
LT978_RS04770  938242 ..  938284 + -13.6  -4.57353   ATGAAGAGCCGCGAA TTTAAAAAAGGGGCGCTGAT TCA ATCAGCGCTCCTTTTATGCA TTTTGTGTACTAAGG 100 243
LT978_RS04785  941371 ..  941398 + -12.8  -5.02074   AAAAATAAAAAGAAG        GGCTGGCCC-TCA GCA TGACGGGTCAGCC        TTTTTTAAACCGTGA 100 33
LT978_RS04790 NONE
LT978_RS04795  942251 ..  942278 +  -4.8   -4.9725   GCACCTGGTATGACA        GGGGAGGGGT AAGCATCG GCCCCTCTTC         TTTTTGTATGCCGAT  77 66
LT978_RS04810 NONE
LT978_RS04815  944580 ..  944601 + -12.3  -5.69379   CACGAAGGAGGTGGC           CCCTTACCG TTTG CGGTAGGGG            TTTTTTTGCTTATAT 100 41
LT978_RS04820  945897 ..  945919 +  -4.1  -5.60993   AAAACAGATTTCTGA          GCCTC-CTGC TTTT GCAATGAGGC           TTTTTTTATGGAAAA  83 26
LT978_RS04825  947650 ..  947669 +  -8.6  -5.34555   ATATATGGTGAAAAA            CTTCAGTC CCGA GGCTGAAG             TTTTTTGTGATCTGC 100 30
LT978_RS04830 NONE
LT978_RS04835 NONE
LT978_RS04840  949472 ..  949500 + -10.4  -4.26327   GAAAAGCATTTCACA        TCCCATCGTC ACAATGACA GACGATGGGA        TTGTTTTAATGCATG  87 9
LT978_RS04850  952378 ..  952403 + -15.5  -5.31275   TCAACTAGTAAAAAA         GGACGCTTTCC AGGT GGAAGGCGTCC          TTTTTTATAGTGACA 100 33
LT978_RS04855  954545 ..  954561 +  -3.7  -4.14739   AGATAAACTCTTAAT              TAAGTCT AAA AGACTAA              TTTTGCAATAGGTAA  59 27
LT978_RS04860  956669 ..  956691 +  -9.2  -6.11019   TAATAGATCATAGAA           CACCCAAATG TGC TGTTTGGGTG           TTTTTTTTAGTTTTT 100 38
LT978_RS04865  958770 ..  958785 +  -4.7  -4.73614   TCTGAAGACGAAGAA              CAGCT GTAACG AGCTG               TTTCTTTTCCTCATC  72 17
LT978_RS04870  959373 ..  959396 + -18.2   -5.1166   CGTCCAAATAAAAAA          CATCCGCCCG AATC CGGGCGGATG           TTTTTAGTTTTGATC 100 30
LT978_RS04880  961756 ..  961785 +  -7.9  -4.43844   TGATATTTATTATAA       GACAGGCTTTCCT TCAA AGGAGAGCTTCTC        TTTTGTAAATGATGA  80 55
LT978_RS04885  962654 ..  962674 +  -4.6   -5.0916   CGTGCGATAAACGAA            GAGGCCCC CCGGA GGGTCTTC            TTTTTATGTTCGAAA  75 31
LT978_RS04890  962860 ..  962876 +  -9.5  -6.02919   CTCCATACCTTTAAA              CCCTTAT TCT ATAAGGG              TTTTTTTGTTTGTCA 100 34
LT978_RS04905  965582 ..  965601 + -10.8  -5.46129   ACTTGAACAGCTTAA            GCCTTTTC TTCG GAAAAGGC             TTTTTTCCTTTCTTC 100 295
LT978_RS04915  966900 ..  966923 + -13.9   -4.0641   GACCGTAATGATCAA          GAGCCCCTC TGCAAT GAGGGGCTC           TTTCTGTCGATGCGG 100 33
        hmpA  968988 ..  969006 + -13.2  -5.63517   GGCATAACAAAAAAA             GACTCCTC AAA GAGGAGTC             TTTTTTATTTGCACG 100 34
LT978_RS04930  969980 ..  969996 + -13.7  -5.54192   TAAGCATCAAAAAAA              GCCGGCA GCT TGCCGGC              TTTTTTTACATTCCT 100 38
        betB NONE
        gbsB  974995 ..  975017 +   -12  -5.03715   GGTATAATAAATGAA           CCCCGCTC CTTTACA GAGCGGGG           TTTTTTAAGGATAAT 100 34
LT978_RS04960  975626 ..  975654 + -16.9  -5.74086   GCGCCAAGAAAAAAA        TTGAGAAGGTCTG ACT CAGACCTTCTCGA        TTTTTTGTTTGATTT 100 12
LT978_RS04970 NONE
LT978_RS04975  978360 ..  978382 + -14.9  -3.78329   GCCCGGAATAAAAAA           CAGCAGGCG TAAAC CGCCTGCTG           TTTCAGTTCGTCCGC 100 30
LT978_RS04985  981300 ..  981310 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  69 179
LT978_RS04990  984281 ..  984298 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 55
         rrf NONE
LT978_RS05000 NONE
LT978_RS05005  984632 ..  984644 +  -3.5  -2.51872   CACCACTTTTATATG                TTATA CTA TATAA                GTCTCTTGTAATAAG  43 36
LT978_RS05010 NONE
LT978_RS05015  984818 ..  984847 +  -4.9  -3.09516   TGGGGGTTCAAGTCC       CTTCATCCGCATT GCCA AACGCGGAAGTAG        TTCAGTGGTAGAACA  52 15
LT978_RS05020 NONE
LT978_RS05025  985007 ..  985018 +  -2.2   -3.9461   TGCCGGTTCAAGTCC                G-GCC CTC GGCAC                TTATTGTTGCGCCCG  52 15
LT978_RS05030 NONE
LT978_RS05035 NONE
LT978_RS05040 NONE
LT978_RS05045 NONE
LT978_RS05050 NONE
LT978_RS05055 NONE
LT978_RS05060 NONE
LT978_RS05065 NONE
LT978_RS05070 NONE
LT978_RS05075 NONE
LT978_RS05080 NONE
LT978_RS05085 NONE
LT978_RS05090 NONE
LT978_RS05095  986238 ..  986250 +  -3.3   -2.8294   GTGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATA  44 0
LT978_RS05100  986348 ..  986366 + -11.8  -5.56673   GGGTCATTAAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTATTATGCGT 100 32
LT978_RS05115 NONE
        menD NONE
        menH NONE
        menB  992865 ..  992891 +  -9.4  -5.07652   GATGACACTACGAAA         CAGCTTGAGCCG CTC TGGTCCAAGCTG         TTTTCTTTTCAAAAA  91 44
LT978_RS05135 NONE
        menC  995594 ..  995610 + -13.7  -5.52384   CTTCCCCCGTTTGAA              CCGGCTG TAT CAGCCGG              TTTTTTTAATAGGCG 100 110
LT978_RS05160  998937 ..  998964 + -13.6  -4.17132   TACAATATGGGGAAA        TAAGACAAGCCC AATA GGGTTTGTCTTA         TTTATTGAGCACTTT 100 23
LT978_RS05165  999726 ..  999743 +  -5.5  -3.19668   TCCGCCTTTTAATGC             GCCGTGA GTCT TGACGGC              TTCGATTCCGTACTG  52 124
LT978_RS05175 1000457 .. 1000482 +   -12  -5.18561   TCGGATAAAAAACAG         GCCTTTTTGC TGACAT GCAAAAAGGC          TTTTTTACATATTTC 100 33
LT978_RS05180 1001058 .. 1001070 +  -3.4   -3.3676   CTCCGGCGGGTCAAT                CGTA TGTTT TACG                TTATAAGCTCTTACA  48 76
LT978_RS05190 1001728 .. 1001752 +  -5.7  -4.90778   TAATCAACAAGGGAA         GACCGGG-GC CATAAA GCACTCGGTC          TTTTATTTGGCTGCC  76 38
LT978_RS05195 1002277 .. 1002290 +  -4.5  -2.78935   CAAACCGTAACATTT               GCTTC AAAG GAGGC                TATACTAGCGGGTAT  48 31
        ytkD 1002892 .. 1002914 + -11.3  -5.69068   ATCATAAAAAACGGA          GACCCG-GCG CTTA CGCACGGGTC           TTTTTTATATTTTTC 100 34
LT978_RS05220 1006457 .. 1006472 +  -2.6  -4.11692   TAAAGAATAAGAGAA              TGAAAG GGGA TTTTCA               TTTTGGGAATGCCTG  55 65
LT978_RS05225 1006728 .. 1006751 + -11.7  -5.26875   ACTGAAAAAACAAAA          GCCGAGGGC ATAAAC GCCCTTGGC           TTTTTTGATTACACG 100 36
        metK 1010060 .. 1010077 + -11.3  -4.03085   GAGAATAATTTTATA             GCCGCTT ACTT AAGCGGC              TTTCCCTTTTTGTAG  86 33
        asnB 1012102 .. 1012123 + -13.1  -5.57729   TCGTTTAATCCAAAA           GGCTTTCGA GTTA TCGAAAGCC            TTTTTTCTATTGTTT 100 33
        alaP 1013706 .. 1013725 +  -7.1  -5.15634   AAAAGCGTAAAAAAA            GAGCCCG CTGAAA TGGGCTC             TTTTTTCATAGGATC  85 31
LT978_RS05255 NONE
LT978_RS05260 1016326 .. 1016357 +  -7.3  -5.73978   TTCGTAATGGGTGAA      CTGCGCCTCTCGTG TACAT CATGAC-GGCGCAG      TTTTTTATTTATGAT 100 34
LT978_RS05265 1017236 .. 1017261 +  -6.9   -5.4477   AACAGTAAATAAAAA         GAGACATGCGCA TTT TACGC-TGTCTC         TTTTTTTAACGGTTT  91 29
LT978_RS05285 1019651 .. 1019670 + -12.8  -5.90231   AAATGGTTCAGCAAA            CCTGCCGG AATC CCGGCGGG             TTTTTTTGTATTTCT 100 53
LT978_RS05290 NONE
        ytrA NONE
LT978_RS05300 NONE
LT978_RS05305 NONE
LT978_RS05310 1023288 .. 1023307 + -11.4  -2.71011   TTATAAAGAATGGAA            GCAGCGGC AGAC GCTGCTGC             TGCTTACAGCGGGGT  81 97
LT978_RS05320 NONE
LT978_RS05325 1026260 .. 1026278 + -12.4  -4.86133   TGTAAAGGAAAAAAG             CCGGCTGG ACA TCAGCCGG             TTTTTCCTCTATCTA 100 36
LT978_RS05330 NONE
LT978_RS05335 1027998 .. 1028021 + -11.8  -4.98103   CCGTCAGCATGTTCA          GCGTGTGACA AAAG TGTCACATGC           TTTTCTCTTTTGTTC 100 18
LT978_RS05340 NONE
LT978_RS05345 1030814 .. 1030833 +   -15  -5.72616   AAAACAAGTTGAGGA            GCCTCCGC ATAA GCGGAGGC             TTTTTTTGTATGAAT 100 39
LT978_RS05350 1031751 .. 1031774 +  -7.4  -5.16237   ATAACGTGATCGATA          CGGAG-CCGCG GCT TGCGGTTTCCG          TTTTTTCATGGGGTT  85 158
LT978_RS05355 1033002 .. 1033037 +   -15  -3.85698   CAAGTGCGATGACGA    CATAAAAAATCCCGCTG TTT CGGCGGGATTTTTT-TG    TTTATACGACCGGAA 100 29
LT978_RS05365 1034850 .. 1034878 + -10.3  -6.07969   CCGCGGGAAACAAAA        ATCTCTCGTCCCT TTT AGGGATGAGGGAG        TTTTTTTTAGTTTTA 100 326
        leuS 1037399 .. 1037421 + -14.9  -5.24531   AACTGACCGGACGAA           GCCCCTCTC CTACA GAGAGGGGC           TTTTTTATCAGGCCT 100 35
LT978_RS05375 1037833 .. 1037861 +  -6.2  -5.60993   CGCTTTGAAGTGAAA       GAAGAAAAGGGAC GTGC GTCT-TTTTCTTC        TTTTTTTATAAAAAA  89 41
LT978_RS05380 1038426 .. 1038436 +  -8.2  -3.55191   ATGATCAGTGATAAG                 CCGG AAG CCGG                 TCTTTGTGCGCTTCA  73 73
LT978_RS05410 1044197 .. 1044216 +  -8.6   -5.3236   ACCGAAAATAAAAAA            GCCCGG-AT GAA ATACCGGGC            TTTTTTATGCATTAT 100 30
LT978_RS05425 1049063 .. 1049079 +  -7.2  -5.26119   GAGAAATAATGAATA              GTCCGC TTATC GCGGGC              TTTTCTTTTTAAAGG  91 39
LT978_RS05430 1049840 .. 1049863 +   -14  -4.96848   ATCGATATCAGAAAA          GCCCAAAACA GATT TGTTTTGGGC           TTTTTATATAGAGGA 100 40
LT978_RS05440 NONE
LT978_RS05445 1052322 .. 1052344 + -12.1  -5.16841   CTTTATATGTAAAAA           TCCCTTTCC GAAAA GGAAAGGGA           TTTTTCTTAATGTCC 100 29
        pepV 1055152 .. 1055173 + -11.5  -4.98255   AAGTGATAATAAAAA           GGGACGCCG AAAG CGGCATCCC            TTTTTATCATTCAAA 100 35
        thpR NONE
LT978_RS05470 NONE
LT978_RS05475 1058855 .. 1058894 +  -2.3  -5.58179   CGCTAAAATTTATAG  GACGGCTATTGATTAG CATATGAGA CTC-TCAATAGCTGTC  TTTTTTATTCTCATG  79 153
LT978_RS05480 1060174 .. 1060204 + -13.2  -3.78193   AGCCTCTTTTTTTAT       GCGGCCGGCGCCTT TAA AAGGCGCTTGCGGC       TCTTTATGTTTCATG 100 403
        trmB 1060905 .. 1060926 +  -6.6  -5.60993   ATGGAGAACAAAAGA           CAGACTCT GATGCG GGAGTCTG            TTTTTTTATGCCGCC  90 16
LT978_RS05495 NONE
LT978_RS05500 1063600 .. 1063632 + -13.7  -5.32944   GCCGATGTAACCGAA      TAAAGCCCAAAAC GCTGATG GTTTTGGGCTTTA      TTTTTTGCTTGTCCG 100 31
LT978_RS05510 1065580 .. 1065609 +   -13  -3.82946   AGTGGTGAGTGTAGG       TAAGCAGGACCGC AAAAA GCGG-CCTGCTTA       TTCTGTTTCAAATAA  95 406
LT978_RS05520 NONE
LT978_RS05525 1067399 .. 1067411 +  -2.7   -3.3341   GCCGAAAAAGGATTA                GAAAG GAT TTTTC                TTATGAACGCTTTTT  46 25
LT978_RS05530 1068058 .. 1068091 + -21.3  -3.17571   TCGAATGATGTGAGA     GAAAGCCGTTAAGCA GGCC TGCTTAACGGCTTTC      TTCAGTTGGGAGCTT 100 64
LT978_RS05535 1070934 .. 1070949 +  -6.8  -4.08767   TAAAAATAAATGGAA              GCGCCGC TGT GCGG-GC              TTTTCGCCCGCTGCG  71 172
        murC 1072334 .. 1072352 +   -11  -5.03715   TAGCGTAACGAAAAA             GCAGTGGG GCT CTCACTGC             TTTTTTGCGCGTGCT  93 33
LT978_RS05545 NONE
LT978_RS05550 NONE
        ytxJ 1073710 .. 1073729 +   -15  -6.06723   TTTCATAATTGCTGG            CCGCCGGT TGAT ACCGGCGG             TTTTTTTTTGAAAAA 100 33
LT978_RS05560 1075037 .. 1075051 +  -8.5  -5.92337   TTCCGCTCTTTAAAG               GCCGC CTCGC GCGGC               TTTTTTTTCGTATCT 100 48
        ccpA 1076311 .. 1076341 +  -5.5  -5.28481   TAAAAAAACGGAAAA      GCAAGCTT-CACTC TGAG GGGTGGAATCTTGC       TTTTTTACTTGAGTA  81 38
        motP NONE
        motB 1077841 .. 1077873 +  -7.9  -5.18371   GTAGAAATTGTGATC      AAAAAAACGACCT CCTCATA AGGTCGTTTTTTA      TTTTGTTTTATACCG 100 5
        acsA 1082489 .. 1082515 + -17.4  -5.83211   GTACCGCGATTATAT         CGTCCCTTCGTT TTA AACGAAGGGGCG         TTTTTTATTTTCATA 100 302
        tyrS 1083824 .. 1083853 + -11.4  -5.65678   TACTGAAAATAAAAA       GCAGTCCGGCCGC TCAAT GCGGCAGG-CTGC       TTTTTTATGTTTTGT 100 35
LT978_RS05620 1087162 .. 1087179 +  -9.1  -5.24796   AAAATGCCTGCAAAA             GGCCCGT TTCC ACGGGTC              TTTTTGTTGTATAAA 100 71
LT978_RS05625 1087704 .. 1087745 +  -8.8  -5.36441   CGGTATCATCATCTG CGGACACTGAACTGACAAC ATGGC GCTGTTTGTTC-GTGTCCG TTTTTTATGTCAAAA 100 110
LT978_RS05630 1088805 .. 1088829 + -10.8  -5.14645   CAATCCATAAAAAAA          TGCACAGACT GAACG GGTCTGTGCA          TTTTTATTCGCTTAT  93 280
        hmpA 1091195 .. 1091211 + -13.7  -5.88565   ATTTTAATGTATGAA              GCACCCG GAT CGGGTGC              TTTTTTTATTCTAGA 100 61
LT978_RS05655 1092579 .. 1092604 +  -3.1  -5.59879   ATTATGGTAAAGGAA         GCGGCACTGCT GATG AGCGGGGTCCC          TTTTTTATATTTCTC  81 107
LT978_RS05660 1094389 .. 1094410 + -15.9  -5.45802   TGAAATTATATTAGG           CGCCTTCCC AAAC GGGAAGGCG            TTTTTATTTTAGGGA 100 95
LT978_RS05675 1096540 .. 1096556 + -12.3  -5.65927   GAGGATTTATAAAAA              GCGCAGA TAC TCTGCGC              TTTTTTATTTAAGTA 100 29
LT978_RS05690 1100918 .. 1100942 + -13.6  -5.67967   CGACGACATAAAAAA         GGAG-CCGGCC TGCC GGCCGGGCTCC          TTTTTTTATCCTAAT 100 30
        refZ 1102238 .. 1102253 +  -3.2  -4.31485   TTGATGGGCGTCCGA              CCCG AATATGAG CGGG               ATTTTTTTTTGCTTC  63 84
        ezrA 1104884 .. 1104912 + -12.6  -6.02919   ACGCACAAGCCAAAA       CTGCACC-CTGAT GGAA ATCAGAGGTGCAG        TTTTTTTGTTTCTCA 100 41
LT978_RS05720 NONE
        thiI 1108910 .. 1108923 +  -2.4  -3.54475   TTTTGAATGAAGACA               TGTG TTTTAT CACA                TTCTATACTCACAAG  46 65
LT978_RS05730 1109198 .. 1109217 +   -15  -5.17353   ACATAATGGCTAAGA            GAGCGGGG AATT CCCCGCTC             TTTTTTCATGAGTAT 100 51
LT978_RS05735 NONE
LT978_RS05740 1112512 .. 1112537 + -13.3  -5.67063   ATCGTATATGAAAAA         GAGGACAGGCA GTGA TGCCCGTCCTC          TTTTTTTATGATAAA 100 11
        sppA NONE
LT978_RS05755 1115050 .. 1115075 + -12.7  -6.07969   CGCAAATAAATGCAG         TAAACCCGGAT TAAC GTCCGGGTTTA          TTTTTTTTGGTTTTG 100 32
LT978_RS05760 NONE
        ytfJ 1116270 .. 1116292 +  -8.5  -5.44119   ATTTATAACAGAAAA           GTTAACTGC CGCCC GCAGTTAGC           TTTTTTTACGATGCG 100 33
         tpx 1116893 .. 1116918 + -11.9  -4.25104   GTAAAGAGGGGAAAA         GAGCTCCG-GGT GCT GCCGCGGAGCTC         TTTTCATGGCAAGGA  95 37
LT978_RS05775 1117932 .. 1117975 +  -5.5  -4.62783   AAAAGAAAAATAATG GCGAAAAAGCAGTGTGAGA CGCAAAAT TC-CGCGCTGCT-TTTCGC TTTTTAAAATGAATG  72 28
LT978_RS05780 1119441 .. 1119460 +   -10   -5.4833   TAATGAGCGAAAAAA            GCACATCC TTTA GGGTGTGC             TTTTTTATTGAATGC 100 38
LT978_RS05785 1120059 .. 1120082 +  -7.4  -5.93809   TATAAAAAGGCTCTG          CTCCGCTCAA AAAA TTGGGTGGGG           TTTTTTTTATAAAAG 100 44
LT978_RS05790 NONE
        argH 1122980 .. 1122997 +  -7.7  -5.86061   CCTTCAGAAAATTAA             GCTGTCT GTAA AGACGGC              TTTTTTTTCGTGCGG 100 229
LT978_RS05800 1123866 .. 1123881 +  -3.2  -2.96808   GCTGAATGTGATTAA              CAGGCA TCAA TCCCTG               TAAGTTTTTTCGTTT  45 7
LT978_RS05805 1124645 .. 1124673 + -14.8  -5.31275   GACATATGTGTCGAA        GACCTTCTGAAT CAAGC ATTCAGAAGGTC        TTTTTTGTGATGCCG 100 39
LT978_RS05810 1126083 .. 1126110 +  -8.4  -2.67245   AGCTGATGGAGAGAA        GTTAAGGGACGC ACCC GGGTCCCTTGGC         ATTCATTATGCGTGG  65 21
LT978_RS05820 1127476 .. 1127489 +  -8.1  -4.33755   TAACGAACACAAGTA               GAGGG GAGA CCCTC                TTTCTTAGTGTTCAT  82 25
        dnaE 1132139 .. 1132153 +  -7.2   -2.8341   AATCGTTTTGTTATA               CAATTG AAA CAATTG               TGCTATCTTATTTAA  60 51
LT978_RS05845 1133504 .. 1133532 + -16.1  -3.12327   CACAAAAATGAAATG        GCAGCGCGTTG GAAAAAA CAACGCGCTGC        TGTTCAATATACGGA 100 44
        accD NONE
        accA 1135649 .. 1135676 +   -10  -5.47914   TCGGGGTAAACTGAA        TAGACGTGAAGCC TAT GGCT-CACGTTTA        TTTTTTGTGATTTTT 100 27
        pfkA NONE
         pyk 1138609 .. 1138630 +  -8.7  -4.81359   AACAGCTTTAAAAAA           GAGAGGGGG GTTC TCCCTTCTC            TTTTGTCTTTAGGTT  88 40
        fxsA 1139093 .. 1139117 +   -10  -5.33026   TTATCAAATAAAAAA          CGGCAGCCTT CTTAC AGGGCTGCTG          TTTTTATTTGGATTG 100 30
LT978_RS05880 1140808 .. 1140822 +  -4.9  -5.76949   TCATAAAGTAAAAAA               GCGGC GTAAA GCTGC               TTTTTTTTGCGGGTG  93 35
LT978_RS05890 1141720 .. 1141740 +  -9.7  -4.95896   GAAGCAGAAATCGAG            CCCTTCTCG AGA TGAGGAGGG            TTTTTCTGCATTTAT  93 114
        citZ 1143581 .. 1143612 +  -6.9  -4.45083   AATCTTGAGAAAAGT      CATTTTATTTTTT ATACAA GAAAAATAAAATG       TTTTCTAAATATGAA  78 117
         icd NONE
         mdh 1145913 .. 1145942 + -11.5  -4.67904   TGTCATAAGAAAAAA       G-GGAAGGCTTCCG AAT CAGAAGCCTTCCTC       TTTTTACAATTAATG 100 33
LT978_RS05915 NONE
LT978_RS05920 1148669 .. 1148697 +  -7.4   -5.2696   GGAGCCAATTTTGAC       GG-CGGGAACGCG TTTT CTTGTTCCCGTCC        TTTTTTGCGTTTTCA  91 122
        polA NONE
        mutM NONE
        ytaF 1153093 .. 1153103 +  -3.2  -3.23984   TATAAGAAGGAGTGG                 GCTT TTT GAGC                 TTGGTCATCGGTTTA  48 36
        coaE 1153697 .. 1153720 + -16.8  -4.98255   CTGGGCATAAACAAA          CACCGTTCGG AAAG CCGAACGGTG           TTTTTCTGGTTAAAA 100 31
LT978_RS05955 1156425 .. 1156435 +  -2.4  -5.60993   CAGGCAGCCTGAGAC                 GCTG ATC CTGC                 TTTTTTTATGGAAGA  79 49
LT978_RS05960 1157810 .. 1157820 +  -3.2  -2.58579   TTCCCCCGTGGTAAA                 TGGC CGG GTCA                 GTTCTCGGAAATTCA  43 204
        speD 1158342 .. 1158358 +  -2.3  -5.94713   GTAAAAAAACAGCAT              TGCTT TTTCTTT AAGCA              TTTTTTTTGTAAAAT  90 117
        nrdR NONE
LT978_RS05975 NONE
        dnaI NONE
LT978_RS05985 NONE
        ytxC 1163354 .. 1163379 + -11.1  -5.00138   ATTCCGTTTATTTAA         CCTCGTCCCTT TCAT AGGGGGCGGGG          TTTTTGATTTGCATA  93 375
        thrS 1165361 .. 1165381 +    -9  -5.50499   CGGAAATACAAAAAA            CCCCGTTC ATTCA GAATGGGG            TTTTTTTGCGTATAA 100 42
LT978_RS06005 NONE
LT978_RS06010 1168855 .. 1168879 + -11.5  -2.90349   CAAGGACTTAAAAAA          GCTGCTTCATA TTA TATGAGGCGGC          ATTTGCATTTCAGCA  82 7
        lrgA NONE
        lrgB 1170141 .. 1170159 +   -16  -5.64304   TCATCGGAGGATAAA             CCCGGGTC ATA GACCCGGG             TTTTTTATTGTGTTG 100 27
        infC NONE
        rpmI NONE
        rplT 1171646 .. 1171666 + -10.4  -5.47218   AGTAAGTTGAAAAAG            CCGCTCTC TTTCC GGGAGCGG            TTTTTTTACGTAAAG 100 36
LT978_RS06040 1171963 .. 1171987 + -11.4  -5.32608   TATAAAAAATAAAAA          GCAGGAGAGC TTATC GCTCGCCTGC          TTTTTTCGCTTTTTT 100 29
LT978_RS06050 1173645 .. 1173668 + -12.6  -6.06529   AATAAAGATACGGAA          GAATCTGCTT TTTT AAGCAGATTC           TTTTTTTTGTCTGTA 100 36
LT978_RS06055 1174750 .. 1174769 + -11.4  -5.27477   CCTATTAATTGATCA            GCCGGGCA TGTG TGTCCGGC             TTTTTTACTTGCAAT 100 33
        araA NONE
        araB NONE
        araD NONE
LT978_RS06075 NONE
LT978_RS06080 NONE
LT978_RS06085 NONE
LT978_RS06090 NONE
LT978_RS06095 NONE
LT978_RS06100 1185448 .. 1185459 +  -7.2  -5.75342   CCGAAAAGCCGGGCT                GCCG CTGC CGGC                 TTTTTTTTACGCAAA 100 45
        cstA 1187373 .. 1187397 + -10.8  -3.69354   TGCAGCATCATAAAA         GCAGAGAG-CC GATC GGTCTCTCTGC          TTTCGGCTTATGACA  83 62
LT978_RS06130 1192747 .. 1192771 +   -10  -6.14618   GTACCGCGGCCACAA          CTCGTCCCTT CTCTC AAGGGGCGGG          TTTTTTTGTTTTCTG 100 302
        pheS NONE
        pheT 1196302 .. 1196323 + -13.1  -5.88565   GAGGATAAAGAAAAA           GCTTGCAGA TCAT TCTGCAAGC            TTTTTTTATTATGAC 100 33
        zapA NONE
LT978_RS06155 1198210 .. 1198228 +  -5.3  -5.42862   ACGGGGCATAAAAAA             CTTCTCT TGACC GGAGAAG             TTTTTTTCAAGCTCT  83 30
        polX NONE
LT978_RS06165 NONE
LT978_RS06170 1202932 .. 1202956 + -12.9  -5.45652   TTAATACTGAAAAAA          GGCTGCCGA ACTCAAA TCGGCAGCC          TTTTTTATTGAGAAT 100 135
LT978_RS06180 1205478 .. 1205495 +  -7.1  -3.85698   TTTATCATGAAGTTA             TGAATGA ATAG TCATTCA              TTTATCGAAGGAAGG  70 71
LT978_RS06185 NONE
LT978_RS06190 NONE
LT978_RS06195 NONE
LT978_RS06200 1208695 .. 1208730 + -14.9  -4.28323   AATATTCATTCATAA    TCAAAACCCTCTGGC TTATTT GTCAGAGGGTTTTGG     TTTGTGTTAATTAGT 100 26
LT978_RS06205 NONE
        trxA 1210884 .. 1210909 + -14.1  -5.27779   CTTCCGTTACGGCAG         GGCGATTCCTT TGAA AGGGAATCGCC          TTTTTTGATCTTCCA 100 49
        uvrC 1213045 .. 1213070 +   -12  -5.88565   GTACTGATATGAAAA         GCAATGAGAG CTATTC CTCTCATTGC          TTTTTTTATTGTGGA 100 295
LT978_RS06220 1214386 .. 1214408 +  -9.9  -4.78149   ACGGGCAGGCAAAAA          GGCGG-GACT TTTG AGTCACCGCC           TTTTTCAATTATACA  91 41
        sdhC 1215748 .. 1215758 +  -3.2  -3.01726   TACGTAGGTTTAAAA                 GCGA TTT TTGC                 GTTTGTGTAAGAGAA  45 5
        sdhA NONE
        sdhB 1218339 .. 1218358 +   -10  -5.60993   GAAAGAGAAAAAGAG            CCTCTTCC GCAC GGGAGAGG             TTTTTTTATAAGGAG 100 41
LT978_RS06245 NONE
        gerE 1219172 .. 1219202 +  -4.1   -4.0098   GAGCTCTGATTCTTG      CCGGTTTTCCTTCTT TAC GAGAAGG-AG-CCGG      TTATTTGCGTTGGCG  57 32
LT978_RS06255 NONE
        racE 1220630 .. 1220647 + -12.7  -5.47399   ATAAATCAAAAAAAC             CCCGCTG TTTA CAGCGGG              TTTTTTTGCGCTTCC 100 37
LT978_RS06265 NONE
         rph NONE
LT978_RS06275 NONE
LT978_RS06280 1223792 .. 1223829 +  -4.8  -4.57837   ACAATCAGTTTTTAA   CAAGTGATGGGGGAGA TTTCAT TCTTCCCCATCAAAAG    TTTTTAAAAAAATAT  70 26
LT978_RS06285 1224017 .. 1224027 +  -2.4  -5.26316   CAGAGTGAAAACTGA                 TGCC GCT GGCC                 TTTTTTATCGGATGA  72 63
LT978_RS06290 1224184 .. 1224210 + -10.2   -5.9362   GGGACGTATAAAAAA         CCTCAAGCCC TGACAAT GGGTTTGAGG         TTTTTTTGTATTTTA 100 34
LT978_RS06295 1224624 .. 1224641 +    -4  -5.02502   GAATAAGAAAAGAAA             CCGGCC GTGTGA GACCGG              TTTTTGTATCATCTG  73 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
LT978_RS06320 NONE
        leuB 1231746 .. 1231761 +  -7.6   -2.5507   AAATCTATAGTATGA              CGCTTT AAAG AAAGCG               GTCTTAGTTCAATAG  61 26
        leuC NONE
        leuD 1233835 .. 1233858 + -11.6  -5.45726   TCAAGCCTGAAAAAA          GCCGCCCGGC ATCT GTCCGGCGGC           TTTTTTTACCGTGTG 100 31
        ddcA 1235045 .. 1235063 +  -5.2  -3.11955   AATGAGAATTACGGT             TGGACAGG CTG CCAGTTCA             TTACATAATGATTCT  52 118
         tig 1236473 .. 1236497 +   -10  -4.43859   ATAGACATAATAAAA          CAGGGCGCGA TTAAT TCGTGCCTTG          TTTTGTACAATTATG  89 55
        clpX 1237988 .. 1238013 +  -6.2  -6.17268   CATAACACGACAAAA         CCTCCTGA CCCGAATTAA TCAGGAGG          TTTTTTTTCTTGTCC 100 36
        lonB 1239788 .. 1239806 +  -8.9  -5.60993   AAGAATCCGTATAAA             CCCCATT TTTAT AATGGGG             TTTTTTTATGGAGGA 100 27
         lon NONE
        yihA 1242897 .. 1242929 + -16.5  -2.77512   GATCAGCCGGTAATG      AAAAACCCAAAACGC AGT GCGTTTTGGGTTTTA      TCGTATAGTTTTGTT 100 28
        hemA NONE
LT978_RS06380 NONE
        hemC NONE
LT978_RS06390 NONE
        hemB NONE
        hemL 1249871 .. 1249897 + -13.1  -5.14477   CGCTGATACCGAAAA         GCCGATGCAAG CAAGA CTTGTATCGGC         TTTTTTCAATGTCTC 100 35
LT978_RS06405 NONE
        ysxE 1252939 .. 1252963 +  -9.3  -5.72616   AATAAAAGCGGAAAA          CGAGTCCTCTT CAT AACGGGACTCG          TTTTTTTATATCCAT 100 10
LT978_RS06420 1256267 .. 1256288 + -14.5  -3.46602   CTGATAAAACAGCGG           GGCGGTTTC CTAA GAAACCGCC            TTGTCGTATAAAAGA 100 37
LT978_RS06425 1257619 .. 1257652 +  -5.3  -4.91109   TGACAGCCCCTCGGA     TGCCCGGC-AGACC ATTTTCC GGTTTTGCCGGGTG     TTTTTATGCTGAAAA  76 38
LT978_RS06430 1258520 .. 1258544 +  -6.5   -6.3578   TGGCGAACGTTTTTT          GGACAAGAC GACAAAA GTCTTGTTC          TTTTTTTTTTCGCCT 100 47
LT978_RS06435 1259636 .. 1259653 +  -9.1  -5.86976   AAATAGTATCTCATT             TCCCGTC ATCC GGCGGGA              TTTTTTATTTTGTCA 100 35
LT978_RS06440 NONE
        radC 1261110 .. 1261123 +  -2.3  -4.98531   AGATTTTATGAGTTT               TTCCC TTTA GGGTA                TTTTTGCTTTAAGAA  66 72
        mreB NONE
        mreC 1263046 .. 1263078 +  -9.1  -4.06805   GAAGCGTAGCAACAG      GGGAGGAAGGATCGT GAA ACGTTTCCTTCTCCC      TTTGATTATGATTTT  79 9
        mreD 1263575 .. 1263588 +  -2.5  -4.34482   GAATTAAGAGATGAG               TAAAA AGGA TTTTA                TCTTTTTTTGACGAA  58 23
        minC NONE
        minD 1265136 .. 1265163 +  -8.6  -6.04324   ATACCAGAATACAAA        GATCTGATGAAGC CCA GCTT-ATCAGGTC        TTTTTTGTTTTTTAA 100 44
LT978_RS06475 NONE
LT978_RS06480 NONE
        rplU NONE
LT978_RS06490 NONE
        rpmA 1268015 .. 1268033 +   -11  -5.78622   TAATGACACAAAAAA             CTCCGGTC GTT GACTGGAG             TTTTTTTTGCAGTAA 100 38
LT978_RS06500 NONE
        obgE 1270224 .. 1270246 + -14.2  -2.62184   TTGATTAAAAAGACG           GAGAGCTTGC AAT GCAGGCTCTC           TGATGTAAAAGGGAG  95 33
        thrR NONE
        pheA 1271590 .. 1271606 +  -7.2   -5.9663   TTCGATATAAAAAAA              GCTCCC CTTCA GGGGGC              TTTTTTTTAATCTTT 100 31
        nadB NONE
        nadC NONE
        nadA NONE
        safA 1278248 .. 1278267 +  -6.4  -5.71712   GAAGATTAATGTTTC            GGGACGAT GTAT GTCGTTCC             TTTTTTTATGTCCAA 100 32
LT978_RS06550 1278987 .. 1279014 + -14.2  -4.87665   ACAGCCGTTAAACGG        GACTGCCGGATG ATTT CATCCGGCAGTA         TTTTTATGGATAAAG 100 30
LT978_RS06555 1279887 .. 1279903 +  -9.5  -5.96219   ATGACTTTGACGCAA              GACATGT GAC ACATGTC              TTTTTTTTCTGAATG 100 37
        ruvA 1280619 .. 1280638 +  -2.8  -2.92613   TTATTAAAGTAAGGT            GATGTTCA TGGA TGAACGGC             TCGTTTCAAGTGAAG  43 29
        ruvB NONE
LT978_RS06570 NONE
        queA NONE
         tgt NONE
        yajC 1284368 .. 1284384 + -12.3  -5.80364   ATACATACAAAAAAA              GAGCGGA GAA TCCGCTC              TTTTTTTATTACGCT 100 52
LT978_RS06595 1285631 .. 1285652 +  -5.1  -3.26184   CGTCACGAACTTGCC           GATGA-CCGG AAT CCGGATCAGC           TCTTCCCTTTTAATC  54 54
LT978_RS06605 NONE
       secDF 1289842 .. 1289867 + -14.1  -5.75342   AAGAGTAAAAGGAAA         CAGGCTGTCTT CCGG AAGGCAGCCTG          TTTTTTTTAGGCCGC 100 33
LT978_RS06615 1290450 .. 1290470 +  -5.3  -2.83403   GCGAGCAATTAACGG            CCCGGATTT CCT GAGACCGGG            GTTTACTCCCGGGAA  52 12
LT978_RS06620 1290863 .. 1290901 + -10.4  -2.76227   GAATAACATTTGAAA  CCCCTCAGTCCGCTCTA GTATAA TAGGGTGG-TTGAGGGG   TGAATTTATGTTAGC  76 35
        recJ NONE
LT978_RS06630 1293796 .. 1293829 + -14.8  -3.60323   ATATTAACCGCATAT     GGAAAAAAGCACTC GTGTCA GGGTGCTTTTTTCC      TATTATTTCATCATC 100 34
        relA NONE
         dtd 1296610 .. 1296625 + -10.4  -6.50115   CTAAACAATAAAAAA              GCTGCC GTTC GGCAGC               TTTTTTTTTTATGAT 100 30
LT978_RS06650 1298777 .. 1298814 + -14.3  -5.95539   GCACCACGGGTATAA   CTCTCGTCCCTACTATA CATG TATAGTAGGAGCGGGAG    TTTTTTTATTTGAAG 100 305
        hisS 1300142 .. 1300159 +  -3.5  -3.79113   GAAGGAGAGGAACGC             TATGTTT GGAA GAACATA              TTATTGTGGCGAGAT  53 39
        aspS NONE
        ssrS 1302186 .. 1302199 +  -3.8  -2.60032   ACTTTATTTTTTGTG               CGCT AAAACC AGCG                GCTTTTTGACAAGCC  45 35
LT978_RS06670 1303022 .. 1303043 +  -5.9  -5.96894   AAGTAAAAAGAAAAA           CAGCC-TTCT TCA GGAAAGGCTG           TTTTTTTATTTGAAT 100 35
        cymR NONE
LT978_RS06685 1306102 .. 1306117 +  -6.1  -3.33696   GCCGAAAAGCTTGCC              GCCGT CGTTAA ACGGC               TTGCTTAAAACGGCG  58 2
        mnmA 1307291 .. 1307310 +  -5.7  -5.00616   AACACATGTAAAAAA            CCTCAAC TCGCAT GTTGGGG             TTTTTTAGCGAAAGG  76 39
LT978_RS06695 NONE
LT978_RS06700 1310389 .. 1310412 + -12.4  -4.16943   AAAGCGTAAATAAAA          CCCGGCACAT GTTT ATGCGCCGGG           TTTTCGCCTGTGGAA  95 32
LT978_RS06705 NONE
LT978_RS06710 NONE
LT978_RS06715 1311327 .. 1311348 + -11.7  -4.85433   TTTAAGCGGAAAAAA           GGATACTTC TCCG GAAGTATCC            TTTTTACGTTTGTCT 100 36
LT978_RS06740 1315823 .. 1315866 + -14.1  -5.21709   TGGTACCGCGAGACA GCTCTCGTCCCTGTGTGAAC GCATG GTTTGCATAGGGA-GAGAGC TTTTTTGCTGTCGCA 100 262
        alaS 1318534 .. 1318546 +  -4.1  -4.52703   GCATCTGCGGAAGAT                TGGAT AAA ATCCG                TTTTATAATCCTTTC  66 5
LT978_RS06750 NONE
        ruvX NONE
LT978_RS06760 1319639 .. 1319662 +   -16   -5.9873   AAATGAACGGAAAAA          GCCGGAGCGC ATAT GCGCTTCGGC           TTTTTTTTGTAATAA 100 40
        mltG 1320824 .. 1320851 + -13.6  -3.23274   AAAAAAGACAGCGAA        TAAAAGGAGGGC AAAA GCTCTCCTTTTA         TTCCATTCTGAAAGG 100 23
LT978_RS06770 NONE
LT978_RS06775 NONE
LT978_RS06780 NONE
         udk 1324544 .. 1324567 +    -9  -3.83324   ATTATGTATAGGCTG          GAAGGGAA-TG AGA CAGTTCCCTTC          TTTCCCTGTTTATAA  76 74
        greA 1325242 .. 1325268 + -13.1  -5.32882   CGTTTAACAATGAAA         CACCTCGTCCA AAATG TGGATGAGGTG         TTTTTTATGATCGTA 100 45
LT978_RS06795 NONE
LT978_RS06800 1327820 .. 1327839 + -12.2  -5.39721   AATAACCGCAAAAAA            GCAGCTGA TTAT TCAGCTGC             TTTTTTCTGTCATAC 100 36
LT978_RS06810 NONE
        mtnN 1329594 .. 1329618 +  -6.4  -4.07568   AAACGAATTCACTAA          GCGGGGGA TTCTCGTTC TCCTCCGC          TTTTCCAGGAGGAGG  71 26
LT978_RS06820 NONE
LT978_RS06825 1331731 .. 1331744 +  -2.3  -2.86604   ATAGATTTACATTCT               CTGTC GGCT GTCAG                CTTGTATTATAATGT  41 51
LT978_RS06830 1332029 .. 1332050 + -13.1  -5.10877   GAAGAATAAAAAAAA           GCCATTGTC TTTT GACAATGGC            TTTTTCATTTCTTAT 100 32
LT978_RS06845 1336350 .. 1336393 +  -9.9  -5.45652   TATGCATACAAGTTA GGCAGCATTC-AA-A-CCCGTT TTA GACGGGCTGTTTGAATGCTGCC TTTTTTGTTAGGCGT 100 187
LT978_RS06850 1337571 .. 1337599 +  -8.8  -4.27465   TGCGGATTTAGTCTG        CCCGCAGCGCAT ATGAA GTTTGCTGCGGG        TTATTTTCGCTTGTG  83 344
LT978_RS06855 NONE
LT978_RS06860 1338115 .. 1338138 + -11.8  -5.93809   ATTGGTACTAGAGCA          GGCGGAAAAC CTAC GTTTTCCGTC           TTTTTTTTATGAAAA 100 30
LT978_RS06865 1338845 .. 1338868 +  -5.3  -4.87786   CTTGGGAAATAAAAA          GAGCTGC TTAAGTCACT GCAGCTC           TTTTTGTGAAATTGG  76 48
LT978_RS06870 NONE
LT978_RS06875 1342801 .. 1342813 +  -2.7   -3.8125   AACAGAAGCGTAAGG                CAATT GAA GATTG                TGTTTTAATTGAAGA  51 39
LT978_RS06885 NONE
        ybaK NONE
LT978_RS06895 1346689 .. 1346714 + -12.7  -4.77165   GGTTTTCGCTGCCGA         CACCAATCGTT TAAA AACGGTTGGTG          TTTTGTTGTCAACCA 100 46
LT978_RS06900 1348853 .. 1348871 + -10.3  -5.90231   TTTAAACTATTAAAA             GCAGGGA ATGGC TCCCTGC             TTTTTTTCTGTTTAT 100 28
LT978_RS06905 NONE
        manA 1351933 .. 1351956 + -15.4  -4.79667   CTGTAATCTTCAAAA          CCCTTCTCTG GCAG CAGAGAAGGG           TTTTTCATCACTTTT 100 35
LT978_RS06920 1353777 .. 1353792 +  -3.3  -4.18018   ATGTGAAAAACCCTT              TGTCT GAAAAA AGACA               TTTTAACTGCGGAGG  57 19
LT978_RS06925 NONE
LT978_RS06930 NONE
LT978_RS06935 1355872 .. 1355893 +  -8.1  -5.83211   CTCGAATGAATAGAT           GATACCAAT CAAT GTTGGTATC            TTTTTTGTTTTAGTC 100 56
        satA NONE
LT978_RS06945 1357086 .. 1357100 +  -5.7  -3.74792   TTGAAGACGTAGAAA               CCGTT ATATA AACGG               TTTACCTCTGTAGTA  62 174
LT978_RS06950 1358207 .. 1358218 +  -2.2  -4.21768   AATTGTCAATTCGAA                TTCG AAAT CGAG                 TTTTAAACTTCATTA  57 39
LT978_RS06955 NONE
LT978_RS06960 NONE
LT978_RS06965 NONE
LT978_RS06970 1361796 .. 1361809 +  -5.3  -3.36878   AAAAAATTAAAAAAT               CTCAA CGAA TTGAG                TTGTACATCGATAAC  56 197
LT978_RS06975 1362491 .. 1362508 +  -9.1  -4.93595   AATGACTATTCAATT             GGCGAGG ATAA CTTCGCC              TTTTTAAATTTTTAT  91 45
LT978_RS06980 NONE
LT978_RS06985 1365376 .. 1365395 +  -7.8  -5.27477   AAAGATTGCAATTCA            GGCGGGGA GAAA TCCTCGTC             TTTTTTAATTAAGGT 100 39
LT978_RS06990 1366864 .. 1366876 +  -6.3  -3.18849   AAATATAACAGTATT                TGATG TTT CATCA                TCTTGCTCATATAGC  57 297
         tet 1368501 .. 1368528 +  -6.5  -5.40474   ACTAAAAAGGGAAAA        GGATC-AAACTT GATAA AAGTTTTGATCC        TTTTTTTAAGGAGCT  89 36
LT978_RS07000 1369544 .. 1369569 +  -6.9  -5.61596   TCCAAAAGCCAAAGA         CAGTTCCGT CCATTTTA ACGGAGCTG          TTTTTTTATACCGCT  93 67
LT978_RS07025 1375905 .. 1375944 +  -7.9  -5.43514   AGTTCTCAGAATGAG  AGGAGC-CGTACCGCC GGAATAGGA GGCGGTACGCGCTTCA  TTTTTTCGTTGTTTT 100 268
LT978_RS07035 NONE
LT978_RS07040 1378565 .. 1378583 +  -9.6  -5.45652   AGCCGTCCTCTTAAA             CACCTCTA TTT TAGGGGTG             TTTTTTGTTGAAAGT 100 251
LT978_RS07050 NONE
        yqeH NONE
        aroE NONE
        yhbY NONE
LT978_RS07070 NONE
        yqeK NONE
        rsfS NONE
LT978_RS07085 1384173 .. 1384195 +  -8.5  -4.63184   CAGGCAAACCAAAAA           CCATCGTTT AAACG GAACGATGG           TTTTTAAAATGCATT  86 15
LT978_RS07095 NONE
LT978_RS07100 NONE
LT978_RS07105 1388853 .. 1388867 +  -2.8  -5.42259   TCAACAGCATCATTT               CGTTTG CTT TGAACG               TTTTTTTCAAAATCA  80 144
         gpr NONE
LT978_RS07135 NONE
LT978_RS07140 1393395 .. 1393411 +  -5.1  -4.91194   AAGAGAAAAGCGGAT              GATTCCT TAA AGGAAGC              TTTTCTCTTTCTTGT  74 49
        lepA 1395342 .. 1395371 + -10.7  -4.03234   CCCGAAAAAATAACG       GAAGCCGCCGCAGT CCC GC-GCTGCGGCTTC       TTTCTGTAAAGAAGA  85 28
        hemW NONE
        hrcA NONE
        grpE NONE
        dnaK 1400212 .. 1400240 + -10.4   -5.7946   TTCAACAGACAGAAA        GTCAAAGTCAGG CATCT CTTGGCTTTGAC        TTTTTTTCTTGCCCG 100 89
        dnaJ NONE
        prmA NONE
LT978_RS07180 NONE
        mtaB 1404581 .. 1404600 +  -7.1  -5.49809   TAACAGATAAAAAAA            CCGGTGC CTTCCC GCATCGG             TTTTTTTACGGTTTC  91 38
        rpsU NONE
LT978_RS07200 1406353 .. 1406375 + -11.4  -5.64274   ATTGACAAGAAAAAA           GACATCTTTC TTA GAGAGATGTC           TTTTTTTATACATAA 100 40
LT978_RS07205 NONE
        floA 1408808 .. 1408818 +  -2.4  -2.87463   AACCTCTCTATTAAG                 GAGG GAG CCGC                 TATATGCACGAGATT  41 39
LT978_RS07215 1409264 .. 1409305 + -13.9  -5.60993   AAAAATAAAGTGTTA GAACCCCTTTTCAAATCAT ACAT ATGAGATGAAAGGGGGTTC  TTTTTTTATGGGGCA 100 33
        yqfC NONE
        yqfD NONE
LT978_RS07230 1411768 .. 1411793 +  -9.1  -5.02502   AAAGTAATGCAAAAA         TGACCCGAT CTCCCGTT ATCGGGTCA          TTTTTATATGATGTG  91 34
LT978_RS07235 NONE
        ybeY NONE
LT978_RS07245 1414779 .. 1414793 +  -4.3  -3.06696   TCATTGGTTTACTCA               TCTTC CTGCC GAAGA               TATGTTAGCAGAAGA  50 3
LT978_RS07250 NONE
         era NONE
LT978_RS07260 NONE
        recO 1417529 .. 1417571 + -17.9  -5.26875   GGAACCGCGGGAGAA CTCTCGTCCCTATGTTTGC GGCCG GCAAGCATAGAGACGGGAG TTTTTTGGTTGCCGC 100 230
        glyQ NONE
        glyS 1420553 .. 1420580 +  -9.9  -4.28049   TAAAATAAAGAAAAA        GACGGTTGCTG TGTGAT CGGCAATCGTC         TTTTCCCCTTTTACA  86 33
        ccpN NONE
LT978_RS07285 1422123 .. 1422143 +  -4.7  -4.70659   ACAAAGGGCCGATAA            CTCAGGA CGCTTTA TCCTGGG            TTTTTGGGTATGCAA  72 26
LT978_RS07290 NONE
        dnaG NONE
        rpoD 1426033 .. 1426055 +  -9.9   -5.4251   TTCTCGAATAGAATG           GAACGGGTC TTTTT GATCCGTTC           TTTTTTATGTATAAG 100 30
LT978_RS07305 1426788 .. 1426806 + -10.2  -5.74122   GAAAAACTCTATCCG             CCGCTTGG ATT CCGGGCGG             TTTTTTTATATGATA 100 72
LT978_RS07310 NONE
LT978_RS07315 1428691 .. 1428709 + -14.6  -5.95286   CTTCTTATAAAAAAA             CTGAGGCC CCG GGCCTCAG             TTTTTTATTTTTACT 100 31
LT978_RS07330 NONE
LT978_RS07335 1432859 .. 1432878 + -10.7  -5.00616   CAGCTCAATAAAAAA            GGAGGGG GAATTG CCCCTCC             TTTTTTACCCCGAGA  93 30
LT978_RS07345 1434188 .. 1434222 + -10.9  -4.57569   TTTGATACATCATAA    GAAAATGGCCTGCTGT TCAG ACAGCTG-CCATTTTC     TTTTTGGAGCGATAC  90 76
LT978_RS07350 1434676 .. 1434696 +  -8.3  -5.51165   CGTGCCGATAAAAAA            CCTCCTG CTATATA CAGGAGG            TTTTTTTCAGCTTTT 100 30
LT978_RS07360 1435811 .. 1435833 + -14.2  -5.28414   CACAACGCAAAAAAA           GCTTGGCGGA ATA TCCGTCAAGC           TTTTTGTGTTTCTTG 100 41
LT978_RS07380 1438924 .. 1438936 +  -2.6  -2.66009   AGTGTAATATGTCTG                CTGG AATCG CCGG                ATTGTGAGCTTTTTC  41 71
        sodA 1439664 .. 1439687 +  -8.9  -5.83226   AATAGTTCGATCAAA          CAAGGTCTC CCGCGA GAGGCCTTG           TTTTTTTATTGACTT 100 40
LT978_RS07390 1441104 .. 1441126 +  -5.6  -4.63044   CTTTAGAATGAAAAA           TGGCACCT GAACAGA AGGTGTCA           TTTCTTTCTGTAAAT  72 73
LT978_RS07395 1443314 .. 1443332 + -13.2  -5.93809   CAACTAACAGAAAAA             CGCTCACA ACC TGTGAGCG             TTTTTTTTATACAAA 100 34
LT978_RS07400 1444370 .. 1444384 + -12.8  -3.66744   CAAAGCTGAGGGGAG               GGCGGG CTC CCCGCC               TCTTCTTCTTTATAG  95 32
        pstC NONE
        pstA NONE
        pstB 1447058 .. 1447068 +  -5.4  -3.28712   TCGGATAGGGGGAAG                 GACT GTG AGTC                 TTGTGAAGGAAGCGG  56 33
        pstB 1447851 .. 1447875 + -12.1  -4.67354   TTCGGATGAAAAAAA          CGGGCCCGG CCATTAA CCGGGTCCG          TTTTATATGTCTATT 100 32
        rpmG 1449277 .. 1449302 +  -6.9  -5.56264   AACACAGCGGAAAAA         GCTGGAGCTTT CAAT AAAGTTCTGGC          TTTTTTGTCTTTCAG  93 48
LT978_RS07440 NONE
LT978_RS07445 1450168 .. 1450199 + -14.6  -2.80817   GGATTTTTTGCATAA      GAAAACCTGCCG GAAAAAAA CGGCAGGTTTTC       TCGTATTGTCAGCTT  95 62
LT978_RS07455 NONE
        glcK 1452978 .. 1453011 +  -7.5  -5.71712   ATCAAAACTGCTGAA     GAAAGTCTGCCTGC CCATATC GCGGGCGG-CTTTC     TTTTTTTATCTCCCC 100 27
LT978_RS07465 1454184 .. 1454206 +    -2  -4.46112   AGGTCGCTTGTTTTT           TGAGACATCT GTG AAATTTCTCA           TTTGTTTACATAAAC  59 23
LT978_RS07470 NONE
LT978_RS07475 1455624 .. 1455646 + -16.4  -4.35116   AGCAATAAAAAATAA           GCCTGTATCC ATT GGATACAGGC           TTTTAATGTGCAGTC 100 33
LT978_RS07485 1456625 .. 1456646 + -10.2  -5.10767   CTGTAAATGAAAAAA           GACAGACC ATAATC GGTCTGTC            TTTTTCTGTTCAGTG  93 35
LT978_RS07495 1457527 .. 1457563 +  -9.5  -5.09426   ATCATAAGAGAAAAA    CGAAGATCCGCTGATCA AAT TTATCAGCTAATCTTCG    TTTTTTGCGGTTGCG  91 34
LT978_RS07505 1458561 .. 1458600 + -11.4   -3.9279   TTAAGATGATAAAAA  GCTGAATGGCCGGGAGGG ATTT CTCCCTCAGCTATTCAGC   TTTGTCAGCTTCAAT  90 32
LT978_RS07515 1461089 .. 1461119 + -17.2  -3.05769   GCTTATTTTTTATTT       TTATGCGTTTTACA CAG TGTAAAACGCATAA       TCTCTCCTTTGCCGG 100 125
LT978_RS07520 1462261 .. 1462281 +  -6.2  -5.00884   GATTAAACGAACCTG           GCCG-TTGA AGGA TCAAGCGGC            TTTTTTGAAAAGGCT  79 35
LT978_RS07525 NONE
LT978_RS07530 NONE
LT978_RS07535 NONE
LT978_RS07540 NONE
LT978_RS07545 NONE
       comGG NONE
LT978_RS07555 1465353 .. 1465375 + -15.6  -3.83155   GCGAATCACACGAAA           GGTCCTCCTG TAT CAGGAGGGCC           TTATTGGTATTCCTC 100 42
        tapA NONE
LT978_RS07570 1467205 .. 1467216 +  -5.8  -2.83403   TGAATACGGTTGCAA                CCTG GCGA CAGG                 ATTTGATAACAAAAA  54 38
LT978_RS07575 1468064 .. 1468097 +  -8.2  -4.75063   GTCGGACAGTTAAAA     GAGGAGTTGTGC ACATATGGCG GCACTACTCCTC      TTTTTGCGCTTTTCT  87 48
        gcvT NONE
       gcvPA NONE
       gcvPB 1475658 .. 1475683 +  -8.4   -5.2189   CACGGTATAAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTCATGATTAG 100 41
LT978_RS07620 NONE
        mntR 1477635 .. 1477657 +  -8.4  -5.62219   ATCCCGGTGAATAAA          GGGCAGCCC GAAATG GGGC-GCCC           TTTTTTTAATGTCTT 100 27
LT978_RS07630 1478767 .. 1478778 +  -3.6  -4.81685   GCCTCTGTGTCCGGC                GCGG TGCT TCGC                 TTTTTGCTCCTTCAT  69 169
LT978_RS07645 1480789 .. 1480807 +  -7.5  -5.31275   TCCGGTATGGTAAAA             TGTTCAC GAGAA GTGAACA             TTTTTTATGCTGAAA 100 59
LT978_RS07650 NONE
         efp 1482546 .. 1482569 +  -8.1  -5.87688   TTAAAGAAATTCGGA          GTCTGCTCC TTTTAC GGGGCAGGC           TTTTTTTTGCGTTCT 100 41
LT978_RS07660 NONE
    spoIIIAA NONE
    spoIIIAB NONE
    spoIIIAC 1484704 .. 1484733 +  -2.9  -3.58343   CCAAGGATAGGGGGG       CTTACAGATTGAG ATTG TTCAAATTGTAGG        TTTAGGCCTGATCGC  49 31
    spoIIIAD NONE
    spoIIIAE 1486347 .. 1486363 +  -2.2  -4.57569   GATGAAATAAAGGAG              GCCCAT TGGAT ATGAGC              TTTTTAACAGAATGG  61 31
    spoIIIAF NONE
    spoIIIAG NONE
LT978_RS07700 1488330 .. 1488348 + -11.7   -4.5265   TAAGAGATCTCCACC             GCCCGCA CCCGC TGCGGGC             TTTTCTGATGTCATT 100 38
        accB NONE
        accC NONE
LT978_RS07715 1490751 .. 1490795 + -13.2  -3.65353   AAGAAATGTAATGAG CGTATAAAA-ACCAAGGGGAT GGGC AGCCCTTTGGTTTTTTATACG TTTCCCGTCATTTCA 100 30
        nusB NONE
        folD 1492313 .. 1492324 +  -2.2  -2.90496   ATGAGCACGATACCC                GCTT CTTA AGGC                 TCCTTTCAGCCAGAG  42 72
        xseA NONE
LT978_RS07735 NONE
LT978_RS07740 1495003 .. 1495017 +  -6.4  -4.42386   TGCTGAAAGTGAGTT               GATCCG CTT TGGATC               TTTTATCAATACAGG  75 161
         dxs NONE
LT978_RS07750 1497748 .. 1497771 + -11.2  -5.26316   AAAGACAGATGTACC          GGAATAATAG GGGG CTATTATTCC           TTTTTTCTGCCATCA 100 19
        argR NONE
        recN 1500060 .. 1500083 +    -9  -5.83226   GTAAAAACGACAGGA          TAAGCTG-CTG ATA CAGGCAGCTTA          TTTTTTTGTTCCATT 100 23
      spoIVB 1501507 .. 1501525 + -14.6  -5.74122   GACAAAGCAAGCTGA             CTGCCGGA TGA TCCGGCAG             TTTTTTTATGTGATG 100 26
       spo0A 1502616 .. 1502653 + -16.4  -4.28651   CTAAATGTCTTTTTG   CGCCTTCTATTCCGTG CATGAA CGCGGAAGAGAAGGCG    TTTTGAGATTTTGCT 100 54
        ytaF 1507865 .. 1507886 +    -3  -5.04385   AATGTTTCTATTCGG           GAGAG-TGC ATGAC GCGGCTCTC           TTTTTTGCCGATCTG  70 81
LT978_RS07810 NONE
LT978_RS07815 NONE
LT978_RS07820 1509907 .. 1509928 +  -8.8  -5.60993   GAATGCCGCAGCTGA           GAAGACTG GTCAGA CAGTCTTC            TTTTTTTATGGGCGG 100 26
LT978_RS07825 NONE
LT978_RS07830 NONE
LT978_RS07835 NONE
        mmgD NONE
LT978_RS07845 NONE
        prpB 1516765 .. 1516782 +    -7   -5.4477   CGGACGACTGAAAAA             GCCCTT TTTTGC AAGGGC              TTTTTTTACAGCTTT  91 30
LT978_RS07860 NONE
        yqiS NONE
         bcd NONE
         buk NONE
        lpdA NONE
LT978_RS07885 NONE
      bfmBAB NONE
LT978_RS07895 1527222 .. 1527250 + -11.8  -5.85244   AGTCTATTAAAAAAA        ACTCCTTTTGCC CGGGC GGCAAAAGGAGC        TTTTTTATTTTCATT 100 31
        brxB 1528787 .. 1528810 + -10.3  -5.37043   TAAGTGAAAGAAAAA          CCCCGG-AGC CGAGC GCTTCCGGGG          TTTTTTATATGGAAT 100 38
LT978_RS07910 1529793 .. 1529811 +  -8.9  -5.10767   GAGAAATAAAAGAAA             GCTCAAC TTTTC GTTGAGC             TTTTTATCTTGAATA  91 32
LT978_RS07915 NONE
LT978_RS07920 1531241 .. 1531260 +  -9.4  -5.75342   ATAACTGTGAGAAAA            GAAGAAGA ATGC TCTTCTTC             TTTTTTTTGAGAAAG 100 44
LT978_RS07925 NONE
LT978_RS07930 NONE
         mce NONE
LT978_RS07945 1534975 .. 1534987 +  -7.7  -2.71712   ACCGAAAAAAAAGCA                CGGTA ATA TACCG                CTTTAAACGGAGGGA  62 7
LT978_RS07950 1536133 .. 1536152 +   -10  -5.37865   CCAACTAAAAACGAA            GCACCCAG TTGA TTGGGTGC             TTTTTTCATTCTTCA 100 33
LT978_RS07965 1538767 .. 1538777 +  -2.6  -4.17023   TAAATATCATTTTAT                 TTTA ATT TAAA                 TTTTAAAATGGTTAA  55 83
        gndA 1540235 .. 1540257 + -16.3  -4.55023   TGAAGTAATGAAGAA           GCCCCCGCA TTGAT TGCGGGGGC           TTTTCTGATATTAAA 100 33
         rnz 1542966 .. 1542978 +  -6.3  -2.71712   TGATATATAATAAAA                CGTAA TAA TTACG                ATTTAAAAAAAGGGG  54 69
        rpmG 1543162 .. 1543195 + -21.3  -4.51196   AATAGATCACGATAA     CAAAAGCCATTGTGC CGTT GCACAATGGCTTTTG      TTTTATCAGTTTACC 100 36
LT978_RS08005 1546884 .. 1546909 + -14.1  -5.44721   GTTTATATAAAAAGG         GCATCAACGGC ACAT GCTGTTGATGC          TTTTTTTGAAATGCT 100 323
        fabD NONE
LT978_RS08020 NONE
LT978_RS08025 NONE
LT978_RS08030 NONE
LT978_RS08035 NONE
LT978_RS08040 NONE
LT978_RS08045 NONE
LT978_RS08050 1578577 .. 1578602 +  -3.3   -4.3295   ATTTGTGACTATCTG         ATTGC-CTGTCA AAA TGACGGAGCAAA         TTTAATTTTCTTAGG  60 25
LT978_RS08055 NONE
LT978_RS08060 NONE
LT978_RS08065 NONE
LT978_RS08070 1614367 .. 1614397 +  -6.9  -2.94299   AAATTCACATATCCG      CCCGCC-GGGTTTA CTCG TAAGCTTTGGCGGG       TCATTTCAAATCTTG  61 39
LT978_RS08075 1615604 .. 1615623 + -12.2  -3.83205   AACGAAAAAATAAAA            GAGGCTTC ACGG GAAGCCTC             TTTACTCTGGGGGCT  90 40
LT978_RS08080 NONE
LT978_RS08085 1617704 .. 1617722 + -10.3  -3.93695   AACAGAATGAAAAAA             GCATGGG ATGCC CCCATGC             TTTATGACTGGTCCG  85 40
LT978_RS08095 NONE
LT978_RS08100 NONE
        dsdA 1622079 .. 1622098 +  -4.4   -5.0917   AGTGAGGCGGTTTTC            CG-TTACAA TCT TTGTAAGCG            TTTGTTTTTTAATCG  75 36
        coaA 1623124 .. 1623137 +  -3.9  -3.28309   GGAGGAAGCGAATAT               TATGA TGCA TCATA                TTGAATTGTATGTAT  49 46
LT978_RS08115 1623705 .. 1623727 + -16.3  -5.46698   TTTTACCTCCGTGTG           CGGCGGGCT TCTTC AGCCCGCCG           TTTTTTCATTTTAAC 100 213
LT978_RS08145 NONE
LT978_RS08150 NONE
LT978_RS08155 NONE
LT978_RS08160 NONE
LT978_RS08165 1629477 .. 1629504 +   -10  -5.22039   TTTTATGACGGGAAA        GCGAAAGAAC CAGCATAC GTTCTTTCGC         TTTTTTACGTTTGCG 100 33
LT978_RS08175 1630772 .. 1630793 + -12.3  -5.00196   ACAAATATAAATAAA           CCGGCATCT GACA AGGTGCCGG            TTTTATTGTTTAAGA 100 27
LT978_RS08190 NONE
LT978_RS08195 1633816 .. 1633832 +    -5  -4.33621   CAACGGTCAGTGTGC              CGCGGC CTTGT GCGGCG              TTTGTTAATTCGATG  67 137
LT978_RS08205 1635209 .. 1635223 +  -2.1  -3.46602   ACATTATGGAGACAC              CGATCG CAGA CGA-CG               TTGTACTGTAAAAAC  46 0
        aspA 1636779 .. 1636792 +  -2.5  -2.96695   GATGAGGCAGTATAG               TATAA TTTG TTATA                TCATTTGATGAAAGC  43 105
        nhaC NONE
LT978_RS08220 1639584 .. 1639608 +  -9.3  -5.67063   AATAAACAACTCTTA          CAGTACCGG ACATGTG CCGGTGCTG          TTTTTTTATCATGAA 100 36
LT978_RS08225 NONE
LT978_RS08230 1640236 .. 1640250 +  -5.6  -3.10389   GGGTTCTTTTTTTAT               GCCCGA ATC TCGCGC               CTTTCTATGATTTCT  54 1
      spoIIM NONE
         fur 1641555 .. 1641574 +    -5  -5.38348   GTAAAAGCCTATGAA            CCTTTTCT GCCA GGAAAGGG             TTTTTTGCTGTTTTT  82 37
LT978_RS08245 NONE
        xerD 1642787 .. 1642809 + -11.9  -5.03145   TCCGCGCGCTTAGGA           GCCGCTGCC AGAGG GGCCGCGGC           TTTTTTGCCGGATTG 100 28
        deoB NONE
LT978_RS08260 1644979 .. 1645002 + -11.8  -5.74122   TAAGTCAGCATAAGT          CAGCTGTTTC TTCG GAAGCAGCTG           TTTTTTTGTGTCCTC 100 38
LT978_RS08265 NONE
     spoIIAA NONE
     spoIIAB 1647140 .. 1647151 +    -3   -2.7186   ACACCTATCAAAAAG                CAAA GCGC TTTG                 TAATTAAGGAGATTT  41 7
        sigF 1647933 .. 1647953 +  -2.4  -6.02919   TGGATCATACGGAAA            GCTGACCT TTTAC GGGCCGGC            TTTTTTTATTTGTGC 100 21
LT978_RS08285 NONE
LT978_RS08290 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
LT978_RS08310 NONE
LT978_RS08315 1653054 .. 1653076 +  -9.2  -4.09685   ACGGGACTTGTATAA           GGACAGCT CAAAAGA AGCTGTCC           TTTTCACCCATAGGC  82 89
        lysA 1654443 .. 1654469 +  -9.5  -4.74504   ACAATAAATAAAAAA         GAGACCGGA ACAATGGCG TCCGGTCTC         TTTTTGCGTTCAGCT  90 34
LT978_RS08330 1656105 .. 1656123 + -11.7  -5.77988   GATAATGACGGAAAA             CCCGCCT TTTTT AGGCGGG             TTTTTTTATGTATAT 100 36
LT978_RS08335 1656760 .. 1656773 +  -5.2  -2.87881   AATGGATGGGGTGCG               GGGC TTATTT GCCC                TCTGTGCAGGGATTC  50 50
        lepB 1657401 .. 1657425 + -12.3  -5.72616   AAATAAACCGTACAG          GCAGTTTTCTT CAT GAGAAAACTGC          TTTTTTTATATAAAT 100 35
LT978_RS08345 1658313 .. 1658339 + -11.7  -5.00616   ATTAAAACTGGCAAA        GCCCCGAACTGT GTAA ACA-TTCGGGGC         TTTTTTGACGCCAAA 100 355
        ribD NONE
        ribE NONE
LT978_RS08360 NONE
        ribE NONE
        ribT 1662329 .. 1662357 + -13.2  -3.77806   TAATAACTGACAAAT        GCTCCCGGAATC TTCAC GGTTTCGGGAGC        TGTTTTGATATAGAA 100 31
LT978_RS08385 NONE
        scpB NONE
LT978_RS08395 1665212 .. 1665229 +  -7.7  -5.71712   TCAGTCAGATAAAAA             CTCTTCC TTTT GGGAGAG              TTTTTTTATGTGAAA 100 29
LT978_RS08400 NONE
LT978_RS08405 NONE
        spmB 1667584 .. 1667601 + -12.7  -5.03994   CGTTATTATTTGGAA             GCGCCTG AAAT CAGGCGC              TTTTTATATATCAGA 100 18
LT978_RS08415 NONE
        resA 1669024 .. 1669034 +  -2.4  -3.13403   ATATGAATTTAATTA                 AGCC GGA GGCG                 TCTTCATGAAAAAGG  43 6
LT978_RS08425 NONE
        ccsB NONE
        resD NONE
LT978_RS08440 1674475 .. 1674495 + -12.6  -6.12458   TTGTTCCATACGAAA            CACCCGCA GAACA TGCGGGTG            TTTTTTGTTTTTTTC 100 56
        sigX NONE
LT978_RS08450 1676267 .. 1676290 + -12.6  -4.73864   TTAAACGTAAAAAAA          CCCAAAACAT ATGA ATGTTTTGGG           TTTTCTGTTGGTTAC 100 37
LT978_RS08460 1678950 .. 1678979 +  -8.6  -6.02919   CAATAAAGGCTTAAA       GCGTCCGCTCTGT GAAGA ACAGC-CGGACGC       TTTTTTTGTTTGTGC 100 35
LT978_RS08470 NONE
LT978_RS08475 NONE
LT978_RS08480 NONE
LT978_RS08485 1683547 .. 1683557 +  -3.2  -2.73799   TGAAAACGGACAAGG                 TGTG AAG CGCA                 TGGATTCTTTATGGA  44 84
LT978_RS08490 NONE
LT978_RS08495 1684990 .. 1685009 +  -3.7  -4.03234   CTATGACTCATTTAT            TCATATA CTGTGT TATATGA             TTTGTGTGCAAGAAG  57 125
LT978_RS08500 1685638 .. 1685663 +  -8.9  -5.40072   ATAAAAAAGATTTGA         AACGGCAGCTG TTTT CAGCGGCCGTC          TTTTTTTAAGCGAAA 100 37
        gudB 1687089 .. 1687110 +  -8.1  -5.38047   CATAAACAAAAAAAA           TCTCCTATG ATAA TATAGGAGA            TTTTTTATATGAGTG 100 53
LT978_RS08510 1688141 .. 1688164 + -12.6  -5.03145   ACGGCTGGGTGCAGA          GAGCATATGA TCAT TCATATGCTC           TTTTTTAAAAAATTG 100 16
        prsW 1688904 .. 1688928 + -12.2  -5.66684   TGATCCAAGTGTGAA          GAAACCGCGC ATCGC GTGCGGTTTC          TTTTTTTATGCCTTG 100 27
        sleB NONE
        ypeB 1691289 .. 1691311 + -11.4  -5.64006   TATAAAAATAAAGGA           GGAAAGGACT AAA AGTCTTTTCC           TTTTTTTCATTACAT 100 36
LT978_RS08530 NONE
LT978_RS08535 NONE
         cmk 1693101 .. 1693124 +  -7.6  -4.01902   AAAACTTTTTATTGA          TCATTCAAAA TCTT TTTTGGATGA           TTCTTTAATACATAT  74 129
        rpsA NONE
         fni 1695440 .. 1695459 + -13.6  -4.42491   CAGCAGACGTTAAAA            GGCATGCG AACC CGCATGCC             TTTCTCTGTTTTTTA 100 28
LT978_RS08560 1696371 .. 1696387 +    -8  -4.25256   AATAAATGAGTTAAG              CCCTTC TGTTT GAAGGG              TTCTTTTCATAGCGA  79 114
        engA NONE
LT978_RS08570 1699028 .. 1699056 + -11.9  -6.28401   ATATAGTCAACTTGA        CTGAAGCAAAG TCCCCCT CTTTGCTTCAG        TTTTTTTGTTTTTTC 100 213
LT978_RS08575 NONE
LT978_RS08580 1700118 .. 1700150 +  -2.8  -5.79588   CGAAACAGGAATGAA      CCTTTTTCCC GCGCATACAAATA GGGAGAAAGG      TTTTTTTGATTTTGA  85 27
      spoIVA 1701793 .. 1701809 +  -4.3  -4.59954   TAAGCTGAAGGACCT              CTTCCTG AAA CGGGGGG              TCTTTTTTTATTCTT  68 38
         hbs 1702485 .. 1702514 + -13.7  -3.34398   ACTTTGTTTCTTCAC       AGAAAAGCCCCTT GATA AAGGGGCTTTTCA        TATTTAAGCAGCCCC 100 77
        folE NONE
        mtrB 1703478 .. 1703494 +  -2.1   -2.8433   CAAATGCCCGCAAAC              GGCGGGA GAA TACAGCC              AATTTCTTTTTTTTA  41 63
        hepS NONE
        menG NONE
        hepT 1706081 .. 1706091 +  -3.2  -3.48064   AAGATGTGAACATTC                 TCCG CCC TGGA                 TTGATTAATTGTCAG  49 56
         ndk 1706712 .. 1706727 +    -9  -5.80364   TTCATTTCTCACAAA              TCAGCC TGCG GGCTGA               TTTTTTTATTGAAAT 100 120
LT978_RS08625 NONE
        aroC NONE
        aroB NONE
        aroH 1710422 .. 1710445 + -12.6  -4.73677   CACGTTTTTATTCTG          CCCAAAAGAA GCCT TTCTTTTGGG           TTTATTTCTTATACG 100 158
        trpE NONE
        trpD NONE
        trpC NONE
LT978_RS08660 NONE
        trpB NONE
        trpA NONE
        hisC 1717519 .. 1717539 +  -9.8  -3.93262   GCTGAAATATTATAA            GAGGTGAT CAAGC ATCACCTC            TTTGCTCTATTAAAA  83 26
LT978_RS08680 NONE
        aroA 1719978 .. 1719999 + -10.9   -5.5353   CAATTAGCCAAAAAA           GCCTGAAGA CGAT TCTTCGGGC            TTTTTTCTTCATGTG 100 20
LT978_RS08690 NONE
LT978_RS08695 1722193 .. 1722213 + -11.2  -3.67597   CTCACATAAATGACA            GCCTTGCA GAATA TGCAAGGC            TTGTTGCGTAAAGAG  83 32
LT978_RS08700 1722703 .. 1722722 +    -5  -3.10879   AAACTCCAGGTATCC            TGCAAAAC ACCC GTTTTGCC             TCTGTTGACCTTGCT  52 41
LT978_RS08705 NONE
LT978_RS08710 NONE
LT978_RS08715 1724849 .. 1724865 +    -8  -5.48825   TACTTTATGAAAAGA              GCTGAC CGGAT GTCAGC              TTTTTTTGCATGATA 100 70
LT978_RS08720 NONE
        ypjB NONE
LT978_RS08730 1727561 .. 1727576 + -11.8   -5.2291   AACACGAACAGTAAA              GGCGGC TTTT GCCGCC               TTTTTATTATCGTCT 100 27
LT978_RS08740 NONE
        dapB NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
LT978_RS08765 NONE
LT978_RS08770 1734339 .. 1734358 +  -4.4  -3.75402   TAAACAAGTGGGAAT            CCTTCT-TA TTT TACAGAAGG            CTTTTTTGCTTGCGA  57 189
        panB NONE
        panC NONE
        panD 1736508 .. 1736522 +  -8.5  -5.10163   GATTTTGTAAAAGAG               CCCCC TTCAT GGGGG               TTTTCTTTTAAGATT  91 31
        dinG 1739413 .. 1739428 +  -7.5  -3.81951   CCAAACGGAATAAAA              GCCGC ATAAAC GCGGC               TTTCGTGGTGTGGGA  72 28
LT978_RS08795 NONE
        tseB NONE
LT978_RS08805 1741432 .. 1741461 + -14.5  -3.17194   AACACAGCTGATTCT       G-GAAAAGCGGCTT TTA AAGCCGCTTTTCAC       TTGCATTGACCCCGT  95 30
        asnS 1742872 .. 1742889 +  -7.7  -4.87665   GTTATGAAAAACGAA             GTCTCCT GCAA GGGAGAC              TTTTTCTAAGTAAAG  86 43
LT978_RS08815 NONE
         nth NONE
LT978_RS08825 1744817 .. 1744837 +  -8.3  -5.71712   AACAAATGTTAAAAA            CCTCCTTTT CTT ATAAGGAGG            TTTTTTTGTATGAAA 100 29
LT978_RS08840 1749386 .. 1749398 +  -4.1  -5.24531   ACGTGGAAGGGCGGT                TTGGG CCG CCTAA                TTTTTTATCAAGCGT  76 86
LT978_RS08850 NONE
LT978_RS08855 1750327 .. 1750352 + -15.5  -4.52589   GATGAAATTGAAAAA         GAAGGCAGCTG AAAA CGGCTGCCTTC          TTTTATATAAAGGGG 100 14
LT978_RS08865 1751181 .. 1751212 + -11.8  -5.00616   AGTATCTTCAAATAA      AAAGCATGAATGAT ATCC ATCATTCATGCTTA       TTTTTTAGGGAAAAA 100 26
LT978_RS08875 1752269 .. 1752287 +  -8.1  -5.88565   ATAAAAATGAAGTAG             GCAGGGG CTGAT TCCCTGC             TTTTTTTCTTGTGCA 100 26
LT978_RS08880 NONE
LT978_RS08885 1755847 .. 1755873 +  -6.6  -3.01712   TGTGAGAATTGCCCG         GCTCAAGAGGAA ATA TTCCTCTTGAAA         TATTGCCCGGGAAAG  58 1
LT978_RS08895 1756467 .. 1756488 +    -8   -5.0133   ATCAGCAAATCAAAA           TGGGGC-CC GATGG GGAGCCCCA           TTTTTTAAGCAGGTG  86 72
LT978_RS08900 NONE
        gpsB 1757444 .. 1757468 +  -5.1  -3.96148   ACGAATAAGGCAGAT         GC-ACTTGTC AAATGA GACAAGTTGC          TTTATAATGAACAAG  61 33
        rnpB 1757904 .. 1757923 +   -10  -4.68724   ATATGACAAATTAGA            GCTCTCCT TTAA AGGGGAGC             TTTTATCTTGAATGA  89 56
LT978_RS08915 1759187 .. 1759226 + -14.5  -3.91196   TAGATTTTCAAGTTG  GAGCCGAAAAACAGGGA CTTAAA TTCCTGTTTTTCGGCTA   TTTAGTATATATAAA 100 94
LT978_RS08920 1759943 .. 1759979 + -13.1  -3.57389   TTTCTGTAGATATAA    TTTTAACAGGCTGTCGA TAT TCGACAGCCTGTAAGCA    TCTTTACGTTTTATT 100 52
LT978_RS08930 1760524 .. 1760538 +   -10  -5.94214   TGATAATGACAAAAA               CTTGGC GAG GCCAAG               TTTTTTTGTTGTATT 100 38
LT978_RS08935 1762543 .. 1762566 + -10.3  -5.52384   CGTATAAAAACAAGA          GCTGCAGGA ATCTTA TCCTGCGGC           TTTTTTTAATCCGGG 100 34
LT978_RS08940 1764412 .. 1764447 + -13.4  -6.28401   CGTGTAGATCATTCG    GCATTGCTTGCTCTTT TTTT GGAGAGCGGGCAATGC     TTTTTTTATTTTTTA 100 289
         xpt NONE
LT978_RS08950 1766443 .. 1766453 +  -3.2   -5.9003   TGCTGAACTTTTTGC                 GAGG CAT CTTC                 TTTTTTTATTAGTTT  91 102
LT978_RS08960 1768055 .. 1768071 +  -5.1  -5.88476   CTCGTCTGAAAAATG              GCATATG CTT CAGATGC              TTTTTTGTTTCTTTT 100 109
LT978_RS08975 1769890 .. 1769910 +  -9.7  -4.79756   CGAATATGTAAAAAA            CCTGCCG TATATAT CGGCAGG            TTTTTCAGTTATATG  91 30
LT978_RS08985 NONE
LT978_RS08990 1772297 .. 1772307 +    -4  -2.62642   ACACCGCAAAATAGA                 GATT GAA AATC                 ATTCTCACTCATGAT  45 27
        fbpC 1772465 .. 1772491 +  -7.2  -5.72622   CGATGTCTTCTTAAA         CATCTGCGGTTT TTA ATGCCGCGGGTG         TTTTTTCTTTATCAG 100 27
LT978_RS09000 NONE
LT978_RS09005 NONE
LT978_RS09010 1776781 .. 1776807 + -10.9  -5.41746   TGAGTAACGTGACGG         CAGCATCTTCC AAATG GGGGGATGCTG         TTTTTTTACCGCCTT 100 34
LT978_RS09015 1777737 .. 1777766 + -10.7  -4.77629   GCTCGAAAAGCTGAA       CGCCAGAGAGATC AGCT GATCCCTCTAGCG        TTTTGTATTGCTTTT  91 7
LT978_RS09035 NONE
LT978_RS09040 1779963 .. 1779987 + -15.9  -4.67904   CAAATCAATAAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTCGAATTCATC 100 30
LT978_RS09050 1780586 .. 1780605 + -13.6  -3.37299   GACGGCAATCAAATA            GGAGAGGC ATAC GCCTCTCC             TCTATTTGTCATCTG 100 25
LT978_RS09075 NONE
LT978_RS09080 1784720 .. 1784746 +  -2.3  -3.08992   ATCGGCAAAAGCTAA        G-CGGCGCAA TAGAACGC TTGTGCCGAC         TATGTTAGAATAAGT  43 26
LT978_RS09085 1785928 .. 1785942 +  -7.8  -5.67283   CAGTGATAACAAAAA               GGTGCG CCA TGCACC               TTTTTTATTTGAATT 100 35
        ilvD 1787884 .. 1787931 +  -7.3  -5.38047   AACAATTGAATTCCG GCCCCCTCTATAGTATCCTTG ACTTCATA TAAGGAT-TT-TAGAGGGGGC TTTTTTATGTCAATG  91 53
LT978_RS09095 1788375 .. 1788391 +  -9.4  -5.26119   TGCGCACTGCTGAAA              TGCCCG AATTC CGGGCA              TTTTCTTTTTGGAGA 100 28
LT978_RS09100 1789175 .. 1789192 +  -7.7  -4.54681   GTGTCATCCATGTAA             GCTCATG ATAT CATGGGC              TTCTTTTTCGTTAAT  83 18
LT978_RS09105 1790075 .. 1790102 +  -6.4  -5.64304   GAAGAAATAAAAAAA        TCATTTCTGAGA AATT TTGCAGAAATGA         TTTTTTATTGTGTTA  90 47
LT978_RS09110 NONE
LT978_RS09115 NONE
LT978_RS09120 1792074 .. 1792100 + -13.1  -5.64421   CCGTGCATAAAAAAA         GCACAGTCTCT ATACG AGAGGCTGTGC         TTTTTTATTTCAGAT 100 31
        ilvA NONE
LT978_RS09140 1795564 .. 1795603 +  -3.7  -5.67063   GCATAACGGTGCACA TTCCTTAGCGCCTTCCTTT TGAT AAGGGAGGGTGC-G-GGAA  TTTTTTTATGATGAA  83 35
LT978_RS09145 NONE
LT978_RS09150 NONE
LT978_RS09155 1797657 .. 1797680 +  -8.2  -5.71712   TTTTCATAAAAAAAA          CACAGATCCT TTCA GGGATTTGTG           TTTTTTTGTGTCAGC 100 42
        msrA NONE
        msrB 1799217 .. 1799259 +    -4  -6.38492   ATTTGAAAAATAGAG CTCAGCAATGAGGCCTGCCT ATC AGACAGGCCTTTTTTCTATG TTTTTTTTTCTTCAT 100 28
LT978_RS09185 1801949 .. 1801975 +  -5.9  -5.67283   ATCAGCCACTATAGG         CCACAGAGT CCCTCACAC GCTCTGTGG         TTTTTTGTTTAGATT 100 73
LT978_RS09195 1802749 .. 1802768 +  -7.9   -5.1244   GATAAAACTGTGTAT            GACAGTC GGAACG GACTGTC             TTTTTCTGTTAATCA  89 36
LT978_RS09200 NONE
LT978_RS09205 NONE
LT978_RS09210 1805786 .. 1805802 +    -8  -5.80951   GTATTGCAAAGTTAA              GCTCTC AGAAA GAGAGC              TTTTTTATTTTCGAT 100 69
LT978_RS09215 NONE
LT978_RS09220 1806456 .. 1806469 +  -2.4  -2.59741   GATACTGTTGGCTGA               GGAA TTATTT TTCC                ATGTATTGTATTTTA  40 181
LT978_RS09225 1806947 .. 1806981 +  -8.8  -3.48884   GTTTCATTTAATCTG     TTATAATCAATCTGTA AAA TACAGACTGGTTATAG     TGTATTTCTTTAACA  74 120
LT978_RS09235 NONE
LT978_RS09240 1808272 .. 1808292 +  -8.3  -4.55128   TAATTTAAAATTAAA            GCCCCTT ATTCAGG AAGGGGC            TTTTGCTTTGCAACT  86 38
LT978_RS09260 1812058 .. 1812069 +  -2.2  -4.41047   AGAGTCAACGCTCTT                TACC ATCA GGTG                 TTTTCCTTAAGCGGT  59 296
LT978_RS09295 1817621 .. 1817633 +  -7.7  -4.43877   TTCGCGGTGGCTTAT                TCCTG CCC CAGGA                TTTATTTGACAATTG  80 131
LT978_RS09305 1818429 .. 1818452 +    -6  -4.46212   GGCTTCCGATTGATC          CTGTTC-CGCC TGT GACGAGAACAG          TTTTATCGTGAAAAA  72 412
        phyC 1819980 .. 1819997 +  -9.9   -4.8048   ATAAACATGAAAAAA             GCAGCTT ATCC AAGCTGC              TTTTTGATGTGAAGA  91 37
LT978_RS09330 1821933 .. 1821955 +  -2.6   -5.2696   TTAATAACGGATATC           AGGCTCTG TCTCTTT CGGAGCCG           TTTTTTACGTTTTAC  73 37
LT978_RS09335 NONE
LT978_RS09340 1824109 .. 1824123 +  -4.2  -2.94099   CAATTGGGAGTTGGC               CCGCAT ACA ATGCCG               TATATCGTAAGAAGA  49 59
LT978_RS09345 1824328 .. 1824356 +   -14  -5.38549   CTATAATGAAAATCA        GCCTGCAGAGAA CATCA TTTTCTGCAGGC        TTTTTGTTATTTCCA 100 53
LT978_RS09355 NONE
LT978_RS09360 NONE
LT978_RS09365 NONE
LT978_RS09370 NONE
        ablB 1829949 .. 1829965 +  -2.3  -2.90496   ATTCATAAGGAGGAA              TTCGTTT GAC AAACAAA              TGGTTTCAGCCGAAG  42 17
        ablA NONE
LT978_RS09385 1831639 .. 1831652 +  -2.4   -4.5028   AAACGGAATTATTTT               GACT TCTCCT AGTC                TTCTTTTGTTGTAAT  59 14
LT978_RS09390 1831957 .. 1831971 + -11.4  -5.80817   ACGCCTGACGAAAAA               CCGCAC ATT GTGCGG               TTTTTTTCTGTTGAA 100 33
LT978_RS09395 NONE
LT978_RS09400 1833535 .. 1833545 +  -4.6  -3.46885   CGTCATTATCTTTTC                 TCCC TCC GGGG                 CTTGTTTTTTTAAAA  53 172
LT978_RS09410 1833831 .. 1833850 +  -5.7  -5.09225   ACTGAAACTGCGGAA            CCGAAGT GAAAAA GCTTCGG             TTTTTTCAATCAGCT  78 36
LT978_RS09415 NONE
LT978_RS09420 1834886 .. 1834920 + -15.1  -3.48276   GTCCAGCCGAGGTAA    GACGG-AGCCGGCTGA AGAT TCAGCCGGCTTCCGTA     TTGTCTGGGAAAGAC 100 26
        deoD NONE
LT978_RS09435 1836813 .. 1836838 +  -7.6  -4.67607   GTGTAATGAGAAGAA         GCCCGCTT GAAAAATAGA AAGCGGGC          TTTCTTTATTACCAG  83 35
LT978_RS09450 1839452 .. 1839480 +   -11  -4.98531   ATGAAATAGTAAAAA        CACCCGATGCGT CGCTC GCGCATGGGGTG        TTTTTGGTTTGCGAA  93 32
        bglA 1841935 .. 1841962 +  -5.5  -4.89339   AAAGGTGTAAAAAGG        GAAGGCTTCAC CGTTGT GTGAAGCCGGC         TTTTTATCAGTAATT  76 39
LT978_RS09465 1843548 .. 1843569 + -15.9  -5.47159   CACAAAAAGTAAAAA           GCCGGCACA TCGA TGTGCCGGC            TTTTTTCTGTTAAGC 100 29
LT978_RS09480 NONE
LT978_RS09485 1846988 .. 1847015 + -16.4  -4.56883   GATTCCTATAAAAAA        CCCTTAGTCTGC TTAA GCGGACTAAGGG         TTTCTTTCATCTTAC 100 30
LT978_RS09495 1848106 .. 1848132 + -13.8  -3.25304   CACATGTGATGAATA         ATAAAGGCTGCC CAA GGCAGCCTTTAC         TTAATGATAATGTTT 100 25
LT978_RS09510 1849406 .. 1849426 + -11.8  -5.80817   TTATTAAAGAAAAAA            CGGCCTGC ATCGC GCGGGCCG            TTTTTTTATCTTAAA 100 34
        rarD 1850896 .. 1850909 +  -6.7  -2.58253   AAGCCGCTAAGCCTT               TCGCT TTCC AGCGA                TAGCTTAAATTATGT  56 31
LT978_RS09525 NONE
LT978_RS09530 NONE
       bshB2 1852275 .. 1852300 + -13.4  -5.71712   AGACTGATAAAAGAA         GGGATAAGGC TGAAAT GCCTTATCCC          TTTTTTTGTGTCAGG 100 34
        cdaS 1855460 .. 1855475 +    -4  -5.10968   ATTTAATATTAATAA              GGTGAA CATC TTTACC               TTTTTCTGTATTGGT  73 65
LT978_RS09555 1856760 .. 1856785 + -13.3  -6.11392   CTGTAATCAGCCGTC         ACCCGCTTCCT TTAT AGGAAGCGGGC          TTTTTTTGTTTGTTT 100 35
LT978_RS09560 1858316 .. 1858327 +  -3.6  -5.95539   TTATTTTTAAAAAAA                GCCT TTCG GGGC                 TTTTTTTGTTTACCA  93 31
LT978_RS09565 1858984 .. 1859010 +  -6.6  -5.23316   GCCCGCAGGGAATGA         GCCCTTTTGTAT TGA GTATACAAGGGC         TTTTTTAGTATACTC  88 26
LT978_RS09570 NONE
LT978_RS09575 1861868 .. 1861892 +  -7.9  -4.85177   AACTGCTTCATAAAA          GCATAGGATAG GCT TTTTCCTATGC          TTTTTCCTATGCTTT  84 15
        sucA NONE
        odhB 1866233 .. 1866258 +  -9.1   -5.4505   TGAAACAGACAAAAA         GTACACTGC CCTTACAA GCAGTGTAC          TTTTTTATTGAGCGA 100 43
LT978_RS09590 1867026 .. 1867056 +  -9.1  -3.23274   GATCTGCAGAATAAT      CAAGGATAGG-AGC GGCG GCAGCCTATCCTTG       TTCAGTTATGAAAAC  72 17
LT978_RS09600 1869585 .. 1869607 +   -17  -5.14563   AGACCAAAAGAAGCA           GGCCCCCGTT CAA GACGGGGGCC           TTTTTTAATAAAGCG 100 39
LT978_RS09620 1874311 .. 1874322 +    -3  -4.18197   GAAGAAGTTTAAGGC                TGAA TGAA TTCA                 TTTTGCCTGAGCCAT  55 29
LT978_RS09625 1874527 .. 1874549 + -11.2  -5.24129   GATGTTTTGTTGAAA           CCGCGGCATT GGA GAAGCCGCGG           TTTTTTATGGCGAAA 100 39
LT978_RS09630 1875163 .. 1875188 +  -7.5  -5.25699   TAAATATCACATAAA         AGCCATCCGAA TGCA TGCGGATGGCC          TTTTTATTATATAAT 100 38
LT978_RS09645 1876314 .. 1876327 +  -8.1  -4.64676   TAGGGATGGCGACAA               CGGTG CAAT CACCG                TTTTGTTCACCGTAC  81 89
LT978_RS09655 1876927 .. 1876963 +  -2.2  -4.59109   CCAATGTCACCATCA    GGGGGAGAAAGCATTG ACCCC CATTGTTTCATCCTCC    TTTTTCGAGGGTATG  61 9
LT978_RS09660 1877525 .. 1877546 + -11.7   -5.8187   TCACAATAATAGCAG           CAGGTACAT TCAT ATGTACCTG            TTTTTTTATTCCATA 100 32
LT978_RS09665 1878299 .. 1878325 +  -8.7   -5.5208   TTCTAATTGCCATAA         CTCTTGCGCCC CTACA GGGTGTGAGAG         TTTTTTCTATTATAG 100 35
        ssrS 1878688 .. 1878710 +  -9.9  -5.49568   GCATACGTAGCGAAA           GCCATTTCC CTTGC GGAGATGGC           TTTTTATTTTGAATT 100 24
        recQ 1880646 .. 1880661 +  -4.7  -3.53761   CAGAAGCCTGAAAAC              CCTTG CTGTAT CAAGG               TTTCAGCAAGACTTA  56 96
LT978_RS09680 1881701 .. 1881727 + -12.4  -5.83226   TCATATAGAGATGAA         GAACACAAGGCG AAA TGCTTTGTGTTC         TTTTTTTCTTCCCTT 100 43
LT978_RS09685 1882238 .. 1882257 +  -7.1  -4.22927   GCGTCAAAATAAAAA            GACGGGG CGGTTT TCCCGTC             TTTATGTATTAATGC  76 29
LT978_RS09700 1884793 .. 1884815 +  -9.8  -4.62471   CATAATATGACGAAA           GGCCGGGTCT CAA ACACCCGGTC           TTTTTAGGGCTTAAG  89 36
LT978_RS09705 1885461 .. 1885495 + -15.2  -3.14132   ATCTCACCGTATTAT     TAAAAAAAAGCCGTGC TCT GCGCGGCTTTTTTCTA     TTGATGGAAAAAGGC 100 23
        czrA 1886747 .. 1886761 +  -5.7  -3.53697   TTTTTAGACAGGGAT               GTCAG CCGTA CTGAC               TGTTATTGGTTTGGT  57 54
LT978_RS09725 NONE
LT978_RS09730 NONE
LT978_RS09735 1889543 .. 1889553 +  -5.4  -3.06915   ATCTGATAAATAATC                 CTGA AAA TCAG                 TTAAATAAACTGCGT  54 28
        csaA 1889950 .. 1889971 + -13.1  -4.28254   CGGATAATAAAAAAA           GACGTTTGC AGAA GCAAACGTC            TTTTGCGTATTGAGG 100 34
LT978_RS09750 1892175 .. 1892191 + -10.9  -5.15117   GATTAATAAAAGAAA              GCTCTCT TTT AGAGAGC              TTTTTTCAGATTTTC  93 387
LT978_RS09765 1893485 .. 1893507 + -13.5  -3.15027   GCAAATCTTAATGAA           CGGGAAGAG AAAAA CTCTTCCCG           CTTTTCATAGCAGCT  95 30
LT978_RS09775 NONE
LT978_RS09780 NONE
LT978_RS09785 1899982 .. 1900001 +   -15  -5.42259   GCTTCTTAATAGCAG            CGCCCCGA AAAT TCGGGGCG             TTTTTTTACGGCTGA 100 32
LT978_RS09800 1901995 .. 1902015 +    -9  -6.09196   CCTTAATCAAAAGGG            GACCTGTC TTTGT GACGGGTC            TTTTTTTGTTTTCGC 100 35
         rtp NONE
        proC NONE
        proB 1904830 .. 1904863 +  -7.5  -5.54885   CTATAAAAATATGAA     AAAGCCCGAGGCTTCG TTT TGAAGC-TCGGGTTTG     TTTTTTATTGATATT 100 48
        gltB NONE
        gltD 1911996 .. 1912013 + -12.7  -4.87626   GGTTTATTTATAAAA             CCGGCTG GGAT CAGCCGG              TTTTTCGTATTGAAA 100 48
LT978_RS09840 NONE
LT978_RS09845 NONE
LT978_RS09850 1915119 .. 1915144 +  -9.1  -4.86385   GCGCGAAATGTAGGG         CTGAATCCTTT AGAA GAGGGATTCAG          TTTCTTTTTCCGACT  91 28
LT978_RS09855 1916442 .. 1916470 + -14.7  -4.71382   GCAGAATAAACAAAA        GCCTCATTTCTCA GCT TGAGAAACGAGGC        TTTTTGCCTAGTTAT 100 32
LT978_RS09865 1918732 .. 1918752 +  -8.4  -5.88061   AAAGATGAAGACTAG            GACACAAT TTCAT ATTGTGTC            TTTTTTTCATTTTTT 100 26
LT978_RS09870 NONE
LT978_RS09875 1919755 .. 1919773 + -13.2  -4.75174   CGGCAAGACAGAAAA             CCCCTTGT TAT ACAAGGGG             TTTTTGAGTTGAATA 100 73
LT978_RS09885 1922023 .. 1922047 +    -5  -5.40072   TAAGGTTTTACCGCA          CATCGCTC AATTCATAC GGGCGATG          TTTTTTTAGAGAAGG  82 38
LT978_RS09890 NONE
        dacB 1924593 .. 1924615 +   -12  -5.25893   AAATCAATAAGAAGG           GCCGGATCCT TAG AGGGTTCGGC           TTTTTTGATGTCTGT 100 31
LT978_RS09900 NONE
LT978_RS09905 NONE
LT978_RS09910 NONE
LT978_RS09915 NONE
LT978_RS09920 NONE
LT978_RS09925 1963186 .. 1963215 + -10.1  -5.67283   CATAAAACATAAAAA       GTCCTGAAGCG TTTTGATT CGCTTTAGGAC        TTTTTTCTTTCCCTT 100 19
LT978_RS09930 1964868 .. 1964889 +  -8.8  -6.06723   CCATTATTAATAAAA           CTGACAGT TGCGGC ACTGTCAG            TTTTTTTTTGCGGCG 100 41
LT978_RS09935 NONE
LT978_RS09940 NONE
LT978_RS09945 NONE
LT978_RS09950 NONE
LT978_RS09955 NONE
LT978_RS09960 NONE
LT978_RS09965 1972667 .. 1972705 +   -11  -5.04987   GTATAAATAAAAAAA   GACTGCATAGATCCGGCT CGC AGCCGTTCTTATGCAGTC   TTTTTTCACAGTCTT  93 35
LT978_RS09985 NONE
        bioA NONE
        bioF NONE
        bioD NONE
        bioB NONE
LT978_RS10010 1981406 .. 1981417 +    -3  -2.73875   ATTTTCTTGATTTTT                GTAA GCGC TTAC                 TAATATTGAGCAGAA  42 288
LT978_RS10015 NONE
LT978_RS10020 NONE
LT978_RS10025 1984303 .. 1984314 +  -4.4  -3.50251   ACCAAAATGAGGAGG                TGCA GTCA TGCA                 TTCATTGCTTATTGA  53 31
LT978_RS10030 1985116 .. 1985134 +  -8.8  -5.64274   ATATTTTTTAAAAAA             CAGCCGCT CTG AACGGCTG             TTTTTTTATGCCTGA 100 46
        bamD NONE
        bamA 1998817 .. 1998830 +  -3.9  -2.50607   TTCTATTCAATTGAA               CTTTT AGGG AAAAG                CATTATTTCTTTAAA  44 19
LT978_RS10045 NONE
LT978_RS10050 2022915 .. 2022940 +  -9.7   -5.4505   TGATCAAGTGTAAAA         CGCCGCTGG CCTGGCAC TCAGCGGCG          TTTTTTATTAAAAAG 100 42
LT978_RS10055 NONE
LT978_RS10060 2026103 .. 2026140 + -13.1  -4.52589   GCATCAGCATTGCAT   TAAGCCAATTTTCTT ACTCGGAA AAGAAAATTGGCTTA    TTTTCTGTGGGAGAG 100 43
LT978_RS10065 NONE
LT978_RS10070 2028355 .. 2028381 +  -7.3  -5.31545   GCTATACAAAAAAAA         CGGTTCTGCTG ATTAA TAACAGAACCG         TTTTTTCCTATTGTT  91 43
LT978_RS10080 2030614 .. 2030637 + -12.5  -4.90381   TTAGTTAAGCTTTAG          GCGGACATC AGCAAC GATGTCCGC           TTTTATTATCTTAAA 100 37
LT978_RS10100 2033465 .. 2033478 +  -5.3  -2.70298   CTTTTTCGCCGTCTG               CTTGT CAAA ACAAG                ATTCTGCTTACGCGC  48 410
LT978_RS10160 2045914 .. 2045934 + -16.9  -5.95449   AGCTAAATAGTAAAA            CCTCCGCTC AAT GAGCGGAGG            TTTTTTATTTTATTT 100 185
        plsY 2051910 .. 2051924 +  -2.8  -4.13945   GAAGATCAAATGGTT               TTGATG AAA CTTCAA               TTTTGACATCAAAAT  55 22
LT978_RS10185 2052295 .. 2052313 +  -8.9  -5.75945   TTACGTGTAAAAAAA             GAACGCA GCGGA TGCGTTC             TTTTTTTTACAGCCT 100 31
        sspO NONE
LT978_RS10230 2057672 .. 2057687 +  -4.7  -5.63504   CCACGATATGTAAAA              CAGAC CCCGGT GTCTG               TTTTTTTGTGCCATT  85 28
LT978_RS10235 2058145 .. 2058172 + -12.1  -5.26316   CTATAACATAAAAAA        GCCGCTTTCAT CCCTCA ATGGAAGCGGC         TTTTTTGTCCGGTCA 100 35
LT978_RS10240 2058802 .. 2058822 + -11.2   -4.4773   TGCTCAAATAAAAAA            CCTTTCCG GCGGA CGGAAAGG            TTTTAATTCATCTGA  90 30
LT978_RS10260 2060934 .. 2060958 + -10.2  -4.84761   AACATGACGCCAAAA          TAAAAAACCC TCTCC GGGTTTTTTA          TTTTTATAACCATGT  91 34
        lexA 2066157 .. 2066171 +  -7.1  -5.47218   ATTTATCGTAAAAAA               CCCCT CTGTA AGGGG               TTTTTTTGCATAAAA  91 55
LT978_RS10305 2067491 .. 2067506 + -10.4  -4.14792   GAAAAAACATAAAAA              GGAGGC AATC GCCTCC               TTCTCTTTTTACTTT  85 29
LT978_RS10330 2072931 .. 2072973 +  -2.7  -5.24531   ATAGGATCTCAATAT CAGGATCATCTTCTCTC TTTTCTATC GGGCGGGTATGATCCTG TTTTTTATACCGAAT  73 37
LT978_RS10335 2073284 .. 2073303 + -10.7  -5.34365   TATCAACACTTTTTG            CACCCGG TAAATC CCGGGTG             TTTTTCTTATTATGG 100 48
LT978_RS10340 2074095 .. 2074114 +  -9.3  -5.50723   TTAATTCAGAGAAAA            CTTGCGG CAACGC CCGCAAG             TTTTTATTTTGATAA 100 37
LT978_RS10345 2075020 .. 2075046 + -12.4  -3.05832   CTCCATGATCGTACG         GCGCCATAAATG AAA TGTTTATGGCGC         TCTGCTGTTTTTCCC  87 76
        adhP 2083307 .. 2083331 +   -10  -3.93985   CTTCCTAATCATTAA          GGCTGCCG GGAATGATA CGGCAGCC          TTTGATCTCTATTCT  83 33
LT978_RS10410 2086485 .. 2086510 + -16.3  -4.10007   TCTAAATTCCGTTAG         GAAAGTCGGCA GTTT TGCCGACTTTC          TTTTCCAAGCATTCT 100 36
LT978_RS10415 2087131 .. 2087152 +  -9.5  -5.18355   CTTAGTTCGGACAGA           CGCCATAAG AAGT TTTATGGCG            TTTTTACTTTTTAAA 100 81
LT978_RS10435 2095169 .. 2095186 +  -6.3  -5.92399   CTTCTATGTTTTACG             CTCATCT TTAA AGATGGG              TTTTTTGTTTTGTTA 100 51
LT978_RS10450 2100076 .. 2100097 +  -3.8  -5.86061   ACGTGTCCTCAATTA           TGGAGTTA GATTCA TAACTTCA            TTTTTTTTGGTCAAG  93 125
LT978_RS10480 2106816 .. 2106848 +  -7.7  -5.64873   GACTAAATGAAAAAA     CCCCTGCTC-TCCC TTTTTT GGGACGAACGGGGG      TTTTTTGTTATTGAA 100 35
LT978_RS10530 2114006 .. 2114022 + -10.1   -4.9725   AAGACAATTAAAAAG              GGCTCCT TTC AGGGGCC              TTTTTATATAGGCCT  93 39
LT978_RS10535 NONE
LT978_RS10540 2114905 .. 2114915 +  -2.4  -4.57341   CGTGAAATCATACAT                 GAGG ACT CCGC                 TTTTTGCGCCAACTT  63 115
LT978_RS10560 2118064 .. 2118093 + -16.5  -4.62783   TTTTTATCATGAGAA       CGGGGTCGTCTGC ACCG GCAGATGACTCCG        TTTTTCAGGTGAATA 100 43
LT978_RS10565 2118612 .. 2118629 +  -7.7   -5.9003   AATAAAAAGAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTTATTGGTTT 100 36
LT978_RS10580 2121491 .. 2121510 +   -15   -3.6914   TGTTTGTGAAAAAAG            CGGCCGGA TTGC TCCGGCCG             TTCTCTATTACCGTT 100 132
LT978_RS10650 2193917 .. 2193939 + -13.5  -3.09933   AAGAACTAAATGTAA           GGGGGACTA ATTAC TAGTCCCCC           TTGACTAACTTGCGG  95 32
        rpmB 2322414 .. 2322438 +   -10  -5.31456   ATAAGCAAAAATGAA          CGCCTGCC CTTTTATGC GGCAGGCG          TTTTTTATGCGTTCA 100 37
LT978_RS11365 2341864 .. 2341900 + -14.6  -5.49234   CTGAAAAAATAAACG    CACCTCCAAGCTGA AACCCGCAC TCGGCTTGGAGGTG    TTTTTTATTACGTAT 100 29
LT978_RS11620 2400362 .. 2400390 +  -7.5  -4.36343   GTTTGACGGTTCCCG       GCAGATTGGCGG AATGCA CC-CCGATCTGC        TTTCTTAATTCCTTC  76 383
LT978_RS11640 2402959 .. 2402979 +  -8.3  -4.99134   GAATGCGTAAAAAAA            GCACCTG CCTGTAT CAGGTGC            TTTTTACTTTCAGCT  90 31
        ylbJ 2406180 .. 2406209 +  -7.9  -3.90889   GCACGGACAAAAAAA       GGATGAGACGC CGATCAGC GCTTCTCATCC        TTTAAATTTCTGCTT  74 20
LT978_RS11705 2411302 .. 2411322 +  -9.8  -5.60993   AAATGTAATAAAAAA            GTACAGCA TATTC TGCTGTAC            TTTTTTTATGAGACG 100 33
        ctaA 2418583 .. 2418606 + -13.9  -4.70659   TGAGGCACATGAAAA          GGCCGAAGC ATCAAA GCTTCGGCC           TTTTTACATATAACA 100 38
LT978_RS11765 2425567 .. 2425577 +  -3.2  -2.72829   CTTCACGCTGCCGGA                 GACG GTT TGTC                 CTTTAAACCGCTCTA  42 89
LT978_RS11775 2427608 .. 2427637 +   -10  -4.53439   AACCGCCAGTAAAAA       GCAGCGCCCG-CT CCAAA AGAAGGGCGCTGC       TTTCTTTCCCTTTGG  89 29
LT978_RS11780 2427917 .. 2427966 + -15.4  -3.66999   AACTGAAAAAATAAA CCGCAATA-AAAAATGACC-CGCC GGAA GGCAAGGTCATTTTTTTATTGCGG TTTAGCTGACTGGCT 100 27
LT978_RS11795 2430527 .. 2430547 + -14.1   -5.1101   ACAATATCTTATGAA            GCCTGAATC AAA GATTCAGGC            TTTTTTACCTCCTCA 100 79
LT978_RS11800 2431413 .. 2431439 +  -8.1  -5.47218   AGTAAACGGATAAAA        CGCCCGG-T-CAT GTC ATGCAGCCGGGCG        TTTTTTTAAATCAGC 100 36
LT978_RS11815 2433811 .. 2433832 + -14.5   -5.4251   TTGTAAACAAGAAAA           GAGACCGGA GAAA TCCGGTCTC            TTTTTTATATCTGAA 100 35
LT978_RS11835 2436287 .. 2436307 + -11.8  -4.59984   CTCATAACATAAAAA            GCGGGCCG ATTGC CGGCTCGC            TTTTGTCTACATTTT 100 34
LT978_RS11845 2438243 .. 2438268 + -13.3  -5.16472   CAATAAACATAAAGA         AGCCCGAAACG AAAT CGTTTCGGGCC          TTTTTTACGCTTTTT 100 35
LT978_RS11860 2439933 .. 2439960 + -15.6  -4.69214   CTTGCACAATAAAAA        CAGCCCCCGCTT TTAT AAACGGGGGCTG         TTTCTTTGTTACATC 100 29
LT978_RS11935 2500196 .. 2500221 + -11.8   -4.0825   TATACACCATGAAAA         TCGGCCGGCC TGCTTT GGCCGGCCAA          TTGTTTCGTTGCGCC  90 44
         def 2500845 .. 2500876 + -20.4  -4.41348   GCCATTGACCGTTAA      GAAAACCGGCACTT CCCA AAGTGCCGGTTTTC       TTTATTTCAAAAGGC 100 26
LT978_RS11950 NONE
        rnjA 2503894 .. 2503914 + -11.2   -5.7946   GGAGGTCTAAAAAAA            CTGCACTC ATTAC GAGTGCAG            TTTTTTTATTGCAGC 100 31
       mreBH NONE
LT978_RS11990 2510582 .. 2510601 +   -10  -5.05505   TGAATCACCCGTAAA            GACGCAGC AAAA GCTGTGTC             TTTTTCGTTTGTGCT  93 27
LT978_RS11995 2511922 .. 2511939 +  -8.4  -5.33026   ATTTTAATAAAAAAA             GGAGGC GATCAG GCCTCC              TTTTTATTTCGCTTC 100 34
LT978_RS12010 2515019 .. 2515048 + -14.3  -5.58522   TTTGCCAAATAAAAA       CGCC-TGCTGTCCG AAT CGGGCAGCGCGGCG       TTTTTATTTTGTCTG 100 29
LT978_RS12085 2528964 .. 2528984 +  -9.7  -4.99972   GAAAACGCAAAAAAA            CTGCTTGAG TAA CGCAAGCAG            TTTTTACTGTTTTAT  93 14
LT978_RS12100 2531596 .. 2531626 + -12.1  -4.75404   CGCTTCCGCCGAATA      GAAAAA-CCGAAGC GTAA GCTTCGGTTTTTTC       TTTTTAATGAAATTT 100 25
LT978_RS12175 NONE
LT978_RS12180 2543508 .. 2543525 +  -2.8  -4.24342   CAAGGGTGACCATTA             TAAGAT AGAAAG ATCTTA              TTTGTTAATGGAACG  58 18
LT978_RS12185 2544897 .. 2544924 +  -9.2   -4.9218   AATAAAGGAAAAAAA        TGCGCCCTTTTC ATCA GAAAAAGGCGTA         TTTTTATAATCAATA  91 39
LT978_RS12190 2545486 .. 2545506 + -13.3  -5.48063   TTCCGCCGCAAAAAA            GCCGATGCG TCA TGCATCGGC            TTTTTTCTATTCAAT 100 41
LT978_RS12200 2546817 .. 2546845 +  -2.5  -5.60993   AGATCATGATACAAT        GAAGACAATCA TTTCAGC TGGTTGTCTTA        TTTTTTTCTGAAAGA  80 68
LT978_RS12205 2548146 .. 2548164 + -10.3  -6.01369   TGCAGACTATTTAAA             CAACGGC ATAAC GCCGTTG             TTTTTTTATTGTTTC 100 27
LT978_RS12220 2553427 .. 2553446 + -12.2  -5.36441   AAATAAATAAAAAAA            GATTGCCC CGGC GGGCAATC             TTTTTTATGTCGAAA 100 35
LT978_RS12230 2554275 .. 2554319 +  -2.4  -6.15828   TGAAATCTCTGAATC GAGGATGTTTTCGTAAA TCTCTTGGATTT TTTACGATA-CATCCTC TTTTTTTTTGCTAGA 100 112
LT978_RS12310 2572652 .. 2572667 + -10.4  -4.63184   ATATCCCGCACAAAA              GCTGCC GCCC GGCAGC               TTTTTCAAATGAATT  89 68
        clpE 2580654 .. 2580679 +   -14  -5.85425   CACAATAAGAAAAAA         GCGGCTCCCT CCTCGC GGGGAGCCGC          TTTTTTGTTTCTTTC 100 33
        motA NONE
        motB 2582398 .. 2582419 +  -8.7  -5.73978   CAGTAATATAAAAAA           GGAAGCCTT TCAA ATGGCTTCC            TTTTTTATTTCTGAT 100 35
LT978_RS12370 2584593 .. 2584609 + -10.1  -5.63517   TCACGATGAAAAAAA              CACCCTG GGT CGGGGTG              TTTTTTATTTAAAGA 100 32
LT978_RS12405 2590944 .. 2590970 + -19.6  -5.41143   GACTGCACTGTTTCA         GCCTCCTTCTCT TTC AGAGAAGGAGGC         TTTTTTTCGGGCGTA 100 291
        mtnK NONE
        mtnA 2593295 .. 2593325 +    -9  -5.71712   TGAGCTGAAAAACCG       CTGATGATGTTGCC TCG GGCAATGTCAGCGG       TTTTTTTGTCTGCAC 100 33
LT978_RS12435 2597528 .. 2597557 + -18.1  -6.04324   CGAAATAATGCAAAA       TACCTCTTAAGCG TTGC CGCTTAAGAGGTA        TTTTTTATTTTTTGC 100 33
LT978_RS12460 2601776 .. 2601795 + -12.8  -5.21709   CATAACGCTTCTTCG            CCCCGGTG TCTG CGCCGGGG             TTTTTTGCTGTACAA 100 43
LT978_RS12465 2602097 .. 2602118 + -12.3  -4.53036   CAATAATGCAGCTTA           TTCGCCGGG ACTT CTCGGCGAA            TTTTGATATTTATCG 100 35
LT978_RS12490 2607413 .. 2607423 +  -2.4  -3.23692   ACGACCAGACAAAAA                 GCCG GAA CGTC                 TTAATCATGGTGCTG  45 11
LT978_RS12495 2609259 .. 2609281 +  -9.2  -4.24948   GCAAATCAAGAGAAA           GAGCTGAC GCTTTTG GTCAGCTC           TTTTCAGTCTGATAC  85 19
        tnrA 2611578 .. 2611599 + -10.1  -5.60993   CCGCTGATCAAAAAA           GTCCGCCTC CTGT GAGACGGAC            TTTTTTTATAAAGCA 100 34
LT978_RS12540 NONE
LT978_RS12545 NONE
LT978_RS12550 2618359 .. 2618396 + -13.5  -3.72756   CATTGTTGTTTGTAT   AAAAACAGGCCGCCGGA GTGA TTCGGCAGCCTGTTTTG    TTATGTATGTTATTG 100 24
LT978_RS12560 2620735 .. 2620760 + -16.3  -5.49234   CATTTTGAAGTTAAA         GCCTCTTTCTC TCAT GAGAAAGAGGC          TTTTTTGTTACATCT 100 342
        metE 2623091 .. 2623117 + -15.2    -5.252   CTTGTATAATGAAAA         CAGCCATCCGTA AAT TGCGGGTGGCTG         TTTTTTCTGGGCGTG 100 32
LT978_RS12575 2625101 .. 2625115 +  -4.2  -3.25824   CGATCACATGTCCCG               CTGTCA TTT TGACCG               ATTTTGTGAATGCTG  52 56
LT978_RS12580 2626391 .. 2626415 +  -6.5  -5.26875   GAACATGCAAAAAAA         GGATCAGGCG TTTGTC CGC-TGATCC          TTTTTTAATTGAGAC  88 43
LT978_RS12605 2629729 .. 2629755 + -15.3  -5.22006   CTGCACAGCAAAAAA         TAAGGATGCCC CGAAT GGGCATCCTTA         TTTTTATTCTGCTGC 100 23
LT978_RS12650 NONE
LT978_RS12655 2638178 .. 2638205 +   -10  -5.38047   AGGTTTAATCAAAAA        GAAAGCTGAC TTTATATT GTCAGCTTTC         TTTTTTGTATAAATG 100 33
LT978_RS12710 2650923 .. 2650942 + -12.2  -5.36441   TCTTCTTAACAAAAA            TCCAAGGC AGCC GCCTTGGA             TTTTTTATATACAGA 100 32
LT978_RS12715 2651248 .. 2651274 + -18.1  -4.16284   TATTTTACATAAAAG         CACCCTGTCCG CTGGC CGGACAGGGTG         TTTGTTAAGACATAT 100 81
LT978_RS12735 2657184 .. 2657204 +  -6.8  -5.93809   AAAAACTGACAAAAA            CGGTTCCT TTTAC GGGAGCCG            TTTTTTTTCTGGCAA 100 32
LT978_RS12740 2658091 .. 2658107 +  -4.5  -3.08201   CGTAACGAGGGGTTA              TAATGGA TAC TCTATTA              CTTTTAACGATATTA  50 36
LT978_RS12745 2659098 .. 2659117 + -12.2  -5.60993   TTTTTCTGATGACAT            CCGCTTCT TTAC AGAAGCGG             TTTTTTTGTGACAGG 100 32
LT978_RS12750 NONE
LT978_RS12755 2660119 .. 2660148 + -11.6  -3.94773   AAAGCTTGATTACAC       TAAGGACAGGAG ACACGG CTCTTGTCCTTA        TTCCTTTTTTCCATA  90 32
LT978_RS12760 2660330 .. 2660360 +  -8.3  -6.09888   TAAAAAAGAAAAAAG       GCTGAATCCCG CAATGTGAA CGGGACTCAGC       TTTTTTTTGTTAAAG 100 21
LT978_RS12945 2687764 .. 2687789 +  -2.6  -4.85782   CTTTAAACTGCTTAA         CGTTCAGC CGATATAAAA GCTGAATG          TTTATTTTTAAAAGA  67 53
LT978_RS12950 2688615 .. 2688631 +  -8.7  -2.97475   CTCCAGTGAATGTAA              GAACGGG CCC CCTGTTC              ATTTATCATAAAAAC  63 165
LT978_RS12965 2689730 .. 2689750 + -11.1  -4.78572   GTATGTAAGAAGAAA            CGGAAGCCC GGG GAGCTTCCG            TTTTCTTGATTACAG  91 33
LT978_RS12985 2692801 .. 2692835 +  -4.9   -5.9218   ATAATCCGGCCATCA     TCCGCCGATCTGC GAAATAACA GCAGGCAGGCGGA     TTTTTTTGTTCTGTA 100 37
LT978_RS12990 2693708 .. 2693726 +  -5.3  -5.63517   ATTAATCTAAAAAAA            GCG-TCCT TTAC AGGATCGC             TTTTTTATTTGGGAA  86 31
LT978_RS13100 NONE
LT978_RS13105 NONE
        fetB 2721498 .. 2721539 +  -3.8  -3.00946   CACTGGCAATTAAAA AAATTCAGCAGGGAAG CGTAAGCTTT TTTCCCTGCTGAATGG  TGGTTTATGACAAGG  47 5
LT978_RS13120 2722729 .. 2722754 +  -8.3  -3.93984   AAACATATAACAAAA         CAGGCAGC-CGT CCG GTGCGCTGCCTG         TTTCTCAATCAATTT  77 31
LT978_RS13145 2729566 .. 2729580 +  -9.2  -5.52384   GATAACGCAAAAAAG               CGGCCT CCC GGGCCG               TTTTTTTCATAGACA 100 36
LT978_RS13150 NONE
LT978_RS13155 2730276 .. 2730298 +  -9.8  -5.77853   TGAAAGTGTAAAAAA           GATGCCGGAT GAT AACCGGCGTC           TTTTTTTTGCCCATT 100 30
LT978_RS13165 2731877 .. 2731899 +   -15  -3.18383   GCACCTCATAAAAAA           GCCCTCTTTT TAA AAAAGAGGGC           TTGCTAAATAGGACT 100 222
        lacG 2735337 .. 2735380 + -14.2  -3.37685   AAAACAATCATTTAA CGATCATACATGATGAAAAGA ATC TCTTTTCATCATGTGTGC-CG TCTTTAGGAGGTTTT 100 26
LT978_RS13185 NONE
LT978_RS13190 NONE
LT978_RS13195 NONE
        galE NONE
        galT NONE
LT978_RS13210 2742295 .. 2742316 +  -7.3    -5.252   TGATGCAATTCTAAA           GCAGGCT CTTTTCGC AGCCTGC            TTTTTTGTAAGGCTG  91 42
LT978_RS13215 2743029 .. 2743058 +  -5.7  -5.05079   CGGAATAAAACCATA       GGCAGCCCCGCT CCATGAA AAC-GGGCTGCC       TTTTTATATCCTTCT  78 33
LT978_RS13220 2744588 .. 2744604 + -12.3   -4.2828   TTTCAAAGTAAAAAA              CCCTTGC GCA GCAAGGG              TTTTAATGAATGAAA  95 47
LT978_RS13275 2752374 .. 2752389 +  -3.3  -5.90231   TCGGTATGAAAAAGA              GCATT TAGTTT AATGC               TTTTTTTATGTTTGT  91 18
LT978_RS13280 NONE
LT978_RS13285 2754326 .. 2754345 + -12.2  -2.62958   TCTTTAAAGACTTTA            TCCCCTTC TTTT GAAGGGGA             AGTTTTATTAAAATC  85 59
LT978_RS13310 2758613 .. 2758630 +  -9.9  -4.98758   TGAGTTATAAGGGGA             CAGGTGA TTTA TCACCTG              TTTTTATACATTTTT  93 31
LT978_RS13340 NONE
LT978_RS13345 NONE
LT978_RS13350 2764994 .. 2765020 + -11.6  -4.55295   ACAATAAAATCAAAA         GCACTCCTGTTG ATA TGGCAGGAGTGC         TTTCTTTATGAAAAC 100 34
LT978_RS13355 NONE
LT978_RS13360 NONE
LT978_RS13365 2766839 .. 2766864 +  -7.5  -3.92369   AAGAGATAAAAAAAG         CCGGCACTC-CG TAA TGAGAGCGCCGG         TCTTCTTTTTTACGT  74 32
LT978_RS13380 2770354 .. 2770379 + -19.1  -3.32844   CACTCAGGATATAAA         GAACCCGGCAG ATCA CTGCCGGGTTC          TTCTCACATAAAAAG 100 27
LT978_RS13405 NONE
LT978_RS13410 NONE
LT978_RS13415 2773441 .. 2773479 + -13.4  -4.39426   ACCCTTGTCCTCTAA   AAAGAAAAAGCAGAGC TAAAAAT GCTCTGCTTTTTCTTA   TTTTCTCCGCATATG 100 26
LT978_RS13420 NONE
LT978_RS13425 2774683 .. 2774709 +  -8.1  -5.04175   AAAGCATAAAAATAA        GCTGCC-GGATT AAAG AATTCAGGCAGC         TTTTTGTATGGTTAA  91 46
        prpE 2784616 .. 2784641 + -11.2  -3.76775   CAGGCATGAAAAAAA         GCCCGAAACCG GTAAA CGGTT-CGGGC         TTTACATGTGTTCAA  84 32
LT978_RS13505 NONE
LT978_RS13510 2788794 .. 2788819 +  -6.9  -5.41143   AGTATTACGCGTAAA         CCAGAGAGGC TTCCTTC GCC-CTCTGG         TTTTTTTGCGGAGTG  91 27
LT978_RS13515 2789407 .. 2789422 +  -2.6  -2.58544   GTCAGAAGCGGAGGA              TCGATCA TAT TGA-CGA              ATTATCAGCATGAGC  41 13
        spxH 2790324 .. 2790345 +  -4.3  -5.61596   TGACCATTAAAAAAA           GCTGATTCC TTAC GGAGCCGGC            TTTTTTTGTGCAAAT  84 31
LT978_RS13525 2790777 .. 2790799 +   -12  -5.15969   GGGGTTTTAGAAAAA           GCCTGCGCAT TTA ATGCACAGGC           TTTTTTGAATTACGA 100 31
LT978_RS13550 2795772 .. 2795795 +  -8.2  -4.71382   GAAAAATAACAAAAA          GCCC-AAACCG CGA TGGTTTTGGGC          TTTTTCCATGCTTAT  87 32
        trpS 2805726 .. 2805747 +   -13  -5.64006   AGAAGATAAAAAAAA           GAGGCGGG AGAATC CCCGCCTC            TTTTTTTAGTTCACT 100 32
LT978_RS13645 2816349 .. 2816370 +  -8.7  -4.58283   TTTATCTACGTTTTG           CACCGTGCT TGTC AGCACCGTG            TTTTTGCCGAGATTC  83 463
LT978_RS13670 2819027 .. 2819042 +    -9  -5.80817   CATTAAATAAAAAAA              CCTGCT ATTC AGCAGG               TTTTTTTGTGTTCAC 100 35
        fosB 2831667 .. 2831717 +  -4.2  -3.73647   TATATGCAGACAAAA GAAAA-GCACCTCCAAACTTTAGG ATGTA CCTAAAATCCGG-GGTGCATTTTC TTATTACTGAATCCC  57 80
LT978_RS13740 NONE
LT978_RS13745 NONE
LT978_RS13750 2834228 .. 2834256 +    -3  -5.85244   AAATTGCAATAAAAA       AAGGCGCCC-CGT TTAG ATGAGGGCGCCGC        TTTTTTATTTTACTT  90 29
LT978_RS13765 NONE
LT978_RS13770 2836736 .. 2836766 +  -7.7  -5.00616   TCTGTAAAAGCAAAA      CAGCCCTCTTGTCT TAGG AGA-AAGAGGGATG       TTTTTTGCGCACGGA  86 34
LT978_RS13790 2841313 .. 2841331 + -10.4  -6.04953   ACAAATGATTACAGA             GTCTTCTT CTT AAGAAGAC             TTTTTTTATTTCTCT 100 269
LT978_RS13795 2843234 .. 2843255 +   -13  -4.77036   ATTGATGCGGAAGAG           GCCGCCTG ATATGA CAGGCGGC            TTTTTCATGGTACGA 100 36
LT978_RS13800 2843768 .. 2843781 +  -2.3  -4.94168   CAAAAGCCCTTGGCA               TCCCT TATA AGGGC                TTTGTTTTGTTATCT  66 47
LT978_RS13805 2844663 .. 2844679 +  -7.3  -2.63913   CCTCGGCATCCTGAA              TCAATGC TCG GCATTGG              TGATGTGGGGTGCTG  59 80
LT978_RS13810 2845280 .. 2845302 +  -9.2  -5.27477   ATGAATCATAAAAAA           GCAAAGGC ATGCCGG GCCTTTGC           TTTTTTACTTCGAAT 100 30
LT978_RS13830 2849994 .. 2850022 +  -7.5  -5.71983   AAGGGATTGCATAAA       CGCCCCGAGCTTC GTTAA GAAGC-CGGG-CG       TTTTTTTATGCTTGC 100 27
LT978_RS13845 2853417 .. 2853449 + -16.3  -3.12471   GGCACCGCATAACAA      ACAGGCGGCACCTTT TAA ATAGGTGCCGCCTGA      TGTATTCAGCTTTGT 100 29
LT978_RS13860 2855478 .. 2855498 +  -7.5  -4.19215   ATTTATGTATAAGAC            CCGGCATGT GTA AAGTGCCGG            TGTTTTTTACGTCTA  75 67
LT978_RS13865 NONE
LT978_RS13870 NONE
LT978_RS13875 2856735 .. 2856747 +  -4.1  -3.25166   TGGTGAAATGAAAGG                TGATG ATC CGTCA                TGATTTTTACAGTGA  49 10
LT978_RS13880 NONE
LT978_RS13885 NONE
LT978_RS13890 2857580 .. 2857606 + -11.7  -4.41895   GGAAACGCCTAAAAA        GCAGCCGCTCTT TCAG AAGAG-GGCTGC         TTTTGGTTCAGCGTT 100 29
LT978_RS13920 NONE
LT978_RS13925 2871219 .. 2871247 + -11.8  -4.85782   GTCATAGACGGCAAA        CCCCGTTCTTTC AACAG GAGAGAATGGGG        TTTATTTTTCGAGCC 100 65
LT978_RS13930 NONE
LT978_RS13935 2873239 .. 2873274 + -11.8   -5.9362   GGAAAAGCGGGCGAG    GTTTCGGAGTAGGGTG CACT CACCCATCTCCGGAGC     TTTTTTTGTGTTTTC 100 14
LT978_RS13940 2874590 .. 2874607 +  -9.9  -5.63517   ATCCGAATAAAAAAA             CACGCAT CCAT ATGCGTG              TTTTTTATTTGAACA 100 40
LT978_RS13965 2878504 .. 2878517 +  -3.8  -4.67038   GCGACCATTTAAAAA               GCAG CCGGGC CTGC                TTTTCCTTTTCAAAA  66 29
LT978_RS13970 NONE
LT978_RS13975 2880270 .. 2880283 +  -5.2  -3.21747   AAACAAATCAGCGCA               GCCG AAAAGG CGGC                TTAATGATAAAATAG  52 8
LT978_RS13980 2880651 .. 2880672 + -13.1  -6.02919   ATCCATTTAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTATTTCTCA 100 31
LT978_RS13990 2881950 .. 2881967 +  -7.7  -5.49809   CGTTTAATAAAAAAA             CAGCCCT CCTC AGGGTTG              TTTTTTTAACATTTC 100 122
LT978_RS14010 2884027 .. 2884046 + -12.2  -5.55698   AAACAGAGTGAATAA            GCCAATCC ATAT GGATTGGC             TTTTTTTACATTATC 100 26
LT978_RS14020 2886568 .. 2886584 +  -6.6  -5.55855   CCAAGATTGACTAAA              CCATTC TGTAC GAATGG              TTTTATTTTTTTACG  90 31
LT978_RS14025 2887987 .. 2888014 + -16.4  -4.88228   GAATAAAGATAAACC        GACCGGCCTTTT TCAT AAAGGGCCGGTC         TTTTTAATGTTAACT 100 35
LT978_RS14030 2888675 .. 2888691 +  -2.3  -3.05844   AGCTGATTTTAGTCA              TCATGAT TAC ATCATCA              TATTCAGATACAGCC  43 35
LT978_RS14035 NONE
LT978_RS14040 NONE
LT978_RS14045 2891825 .. 2891845 +    -9  -4.57341   GAATCATAACAAAAA            GGCCCGAA TTAGT TTTGGGCC            TTTTTGGCGAGCATT  86 32
LT978_RS14055 2894360 .. 2894384 +  -9.2  -6.04419   GTAAAACATAAAAAA         CCGGCGTCGGC CATG GCCC-CGCCGG          TTTTTTTATTATTTT 100 37
LT978_RS14065 2896212 .. 2896230 + -14.6  -4.29396   GATCAGCATGTAAAA             GCGAAGCC CCC GGCTTCGC             TTTTCGTCCGTCATT 100 44
LT978_RS14090 2900678 .. 2900712 + -20.8  -5.02074   AGGATATGTGACAAT     AGGGCGCCGCACAATT CTA AGTTGTGCGGCGCCCG     TTTTTTCGGCCGTCA 100 30
LT978_RS14095 2902205 .. 2902232 + -15.6  -5.26316   AGGTTAAAATGAAAA        CCCTGCACGGAA TGAT TTCCGCGCAGGG         TTTTTTATGCCATCG 100 34
LT978_RS14105 2903679 .. 2903702 +   -11  -5.80364   AAATTTCTCATGCTC          CCCAAACAGC GGAT GCTGCTTGGG           TTTTTTTATTAAAAT 100 68
       fabHB 2904769 .. 2904796 + -21.4   -5.2291   GAAATCAAAAAAAAA        GAGGCGCTGAGC ATCT GCTCAGCGCCTC         TTTTTCTTATGCTGT 100 43
        hmoB 2914358 .. 2914374 + -13.7  -5.21709   AATAGACTGAAAACC              GCCGGAG ATT CTCCGGC              TTTTTTGATGTCCCG 100 31
LT978_RS14150 2915908 .. 2915920 +  -3.3  -3.11222   CATGGGAAAAGCAGA                CGAGG GGG CATCG                CTTTTGACGTTAACG  46 78
LT978_RS14155 2917123 .. 2917147 + -15.8   -3.6149   CTGACATAAAAAAAA          CAGCCGGTAC ATTAC GTACCGGCTG          TTGTAATTCTTAAAT 100 37
LT978_RS14175 2920761 .. 2920779 + -11.8  -5.47218   TCAGAAAACGGCTTG             CCTCATCT TAA AGATGAGG             TTTTTTTGCGTCCGG 100 15
        serC 2922012 .. 2922034 +  -3.5  -4.57569   AACATAACGGTTCCT           TTGATATAC TGTTT GCATATCAA           TTTTTCCGGCCATCG  64 50
LT978_RS14185 2922640 .. 2922659 + -12.2  -5.28755   AACCGCATACCGAAA            CCTCTTCC GGCC GGAAGAGG             TTTTTTAATGTGTTT 100 39
LT978_RS14195 2923382 .. 2923394 +  -3.3  -5.82388   AAAAGTGCGGGCATA                TTGCG TTC CGCAC                TTTTTTTTGCGGTTT  88 58
LT978_RS14200 2924582 .. 2924593 +  -3.6  -5.11881   AGCTCTTCTGTTCTT                CCCT TTCC GGGG                 TTATTTTTTTTCTTT  73 467
LT978_RS14210 NONE
LT978_RS14215 2925513 .. 2925547 + -17.2  -5.84381   AAACAGGCAAAAAAA     TATGGCTGACGGAGGT CTG ACCCCCGACAGCCATA     TTTTTTTCTTAATAA 100 39
LT978_RS14230 2926870 .. 2926897 + -12.1    -5.626   TCTAAATAAAAAAAA        CTGTGCGGGCTC TCAGC GAGCC-GCACAG        TTTTTTTATGCGATG 100 32
LT978_RS14265 2934916 .. 2934935 +  -8.6     -3.67   TTATTCCACAGATAA            CAGAAGCT TTCC GGCTTCTG             TATTTTACCGGTTAA  74 26
LT978_RS14275 2936256 .. 2936266 +  -3.2  -5.30686   TGTAAAAACAGTATA                 TTCC GGA GGGA                 TTTTTTATGAATATT  75 36
LT978_RS14280 2936752 .. 2936765 +  -3.8  -2.95943   GATCCAAGACTTCCT               CTCC AGAGAC GGAG                TGTGATCTGTTTATG  47 7
LT978_RS14285 2938000 .. 2938022 +   -15  -5.40072   AATCATAAAAAAAAA           CTGACCTCTT CAT AAGAGGTCAG           TTTTTTTGAGCGGGA 100 33
LT978_RS14305 2943691 .. 2943706 +  -3.2  -3.97042   ATCAAACATGCGTTT              TGCGGA TTCA TCTGCG               TTTACTTGATCATAA  58 301
LT978_RS14320 NONE
LT978_RS14325 2947782 .. 2947794 +  -4.1  -2.76261   ATTTCCTACAAGGAG                CGTGA ACG TCATG                ATTTCGCACTTCAGC  45 107
LT978_RS14330 2948008 .. 2948029 +  -9.4  -5.13343   GACTGAAAGCTAAAA           GCTCAGCC GCATCA GGCTGGGC            TTTTCTTTTCCCTTC  91 35
LT978_RS14335 2948448 .. 2948471 + -14.6   -4.4009   AATAAATGGCTTACA          GAAGGCGCGG GATA CCGCGTCTTC           TTTTATGCCGTCACC 100 44
LT978_RS14340 2948638 .. 2948674 +  -2.1  -2.78405   TCACAGGCATTCTTT    TCCCCGCTGCTTTGAAT GAT ATAATGAGCGGCGAGGA    GGTTTTTTACATGAA  41 7
LT978_RS14345 2949315 .. 2949336 +  -8.7  -3.66178   TACTGAATGAAAAAA           GGGCGAATC TTTT GATTCACCC            TTTCCGATTACACCG  74 35
LT978_RS14360 2954054 .. 2954073 +  -7.9  -5.42259   AATTCTTTCTGTAAA            GCAGCTT AATCAA AAGCTGC             TTTTTTTACAGCTCC 100 39
LT978_RS14370 2955336 .. 2955354 + -11.7  -5.48303   TGACTGAAGCAAAAA             GGCCGGA TGTGT TCCGGCC             TTTTTTTCAGCTTAT 100 38
LT978_RS14380 2957328 .. 2957350 + -11.3  -5.71712   CCATGAATAAGAAAA           GCCGGATCT GTATA GGATCCGGC           TTTTTTTATGTCGCG 100 31
LT978_RS14400 NONE
LT978_RS14405 NONE
        crcB 2961178 .. 2961202 +  -7.2  -3.23274   ATCCATTTAAAAAAA          CCTTGAGC TTATTTTTC GCTCAAGG          TTGCGTTATGAAGCA  64 31
LT978_RS14430 2965899 .. 2965925 +  -3.8  -3.51597   TAACAGGAGGTGTTA        CCTTCATCTTC CCAAAA GGAG-TGAAGG         TTCTAATTGGACATT  51 54
LT978_RS14435 2967274 .. 2967301 +   -15  -5.72207   AAGCATAACAAAAAA        GCTTGCGCGTCTG ATA CAGACG-GCAAGC        TTTTTTTCATTTACA 100 33
        sigM NONE
LT978_RS14450 NONE
LT978_RS14455 2969995 .. 2970015 + -10.4  -5.44119   TTTTAAACATAAAAA            CAGGCCCT TTTAC GGGGCCTG            TTTTTTTAAAATGAA 100 35
LT978_RS14480 2976301 .. 2976318 + -11.3  -4.07124   CGTCTAAATAAAAAA             CCCGTTC GGAT GAACGGG              TTTCTCTCACTGCTA  86 64
LT978_RS14490 2978998 .. 2979021 + -18.2  -4.67697   ACGGAAAATAAAAAA          GGATGCGGGG ATTT CCCCGCATCC           TTTCTTCTTTTACAG 100 30
        nsrR 2982686 .. 2982707 + -11.7  -5.60993   GACTGCTCAGAAGCT           GAAGGAATG TCCG CATTCCTTC            TTTTTTTATGCCGGC 100 24
LT978_RS14510 2984331 .. 2984358 + -14.2  -5.07567   TCTGATATCTGATAA        GCTGTACGGCCT CATA AGGCTGTGCAGC         TTTTTTACAGTCTGA 100 36
LT978_RS14520 2985126 .. 2985146 + -16.9  -4.54553   GCTGACATAAAACAA            TCCCGGCGT CAG ACGCCGGGA            TTTCTTGTGTTTGTG 100 31
LT978_RS14590 3000691 .. 3000710 + -13.6  -5.39681   GTGAAATTCTTTTTT            GCGCTGTG CCTG CACAGCGC             TTTTTGTTTCGTTCT 100 436
LT978_RS14605 3003787 .. 3003826 +  -8.7  -5.59357   ACCTCCATTAATGAA  AAAAACGGCGTTGGAAA CCTGAC TCTCCAATGCCGTTTTC   TTTTTTTCATATGCT 100 30
LT978_RS14620 3005982 .. 3006007 +  -9.9   -5.0925   TTAGAAACGAAAAAA         TCCTTCATTCGT TCA ACGA-TGAAGGA         TTTTTCGTTTTAGCG  93 37
LT978_RS14630 3008953 .. 3008965 +  -9.1  -4.88687   GTCAGCATGTTCCGC                CGCCT GAT AGGCG                TTCTTTTTTGTTTCC 100 318
        cspB 3010102 .. 3010123 + -13.7  -5.90981   AAATTGTTTAAAAAA           CCTGCCGGT GTAC GCCGGCAGG            TTTTTTTTCATCTAA 100 39
LT978_RS14735 3027139 .. 3027154 +    -9   -5.0538   TGGCTTTCATAAAAA              GACACG CCTT CGTGTC               TTTTTTCACATAAAA  91 29
LT978_RS14745 NONE
LT978_RS14750 3028528 .. 3028545 + -12.7  -3.05715   CTAAGCGCTTAAAAA             GGCGGGT GAAT ACCCGCC              TTCACTGCCGGCATT  91 399
        katA 3035247 .. 3035286 + -17.5  -3.45945   CCGTCACCAAAATAA  CATCAAAAAACCTGCCGG TCTGC CCGGCAGGTTTTTT-ATG  TTCATTATCAATAAA 100 26
LT978_RS14820 3042715 .. 3042753 + -14.9  -4.75472   TTCACCGTTTTTCTA   AAAAAGATGAAGATGGA CACAC TCCATCTTCATCTTTTC   TTTTATTGATATAAG 100 25
LT978_RS14940 3054554 .. 3054601 + -10.7  -5.42198   CAGAAAAAACAGTGT AAAATAAACGAAGCTGACCGT ATCAAA GCGGTCAGCTTCGTTTAGTGG TTTTCTTTTTTGGAA 100 19
LT978_RS14955 3057084 .. 3057117 + -15.5  -4.89393   GAAAAAATAACTTCT     GAAACAAGCGGGAGCC CGG GGCTTCCGCTT-TTTC     TTTTTGTCCGATTTG 100 31
LT978_RS14960 3058396 .. 3058423 + -15.6  -5.00642   TTGCATTCAAAAAAA        CGTATGCCGACC ATTC GGACGGCATACG         TTTTTGTATCAGTTC 100 69
LT978_RS14990 3062630 .. 3062649 +  -9.3  -4.56775   ACGGCCACGGCACTC            GCGTCAG CTATGA CTGACGC             TTTTTAGCGGCCGCT  88 9
LT978_RS15000 3064941 .. 3064965 + -13.6  -5.84432   GCAGAAAAAATTAAA          GCTCGGCTCT GTTTA AGAGCCGGGC          TTTTTTTGTCTTCTC 100 10
LT978_RS15035 3071259 .. 3071277 + -11.7  -5.75342   ACACACACCGTAAGA             GACCGGG AATGA CCCGGTC             TTTTTTTTGCGAAAA 100 40
LT978_RS15040 NONE
LT978_RS15045 3072658 .. 3072685 +   -15  -5.25772   GAAACACTGAAAAAA        GCTTGCAGGCGGA ATA TCC-CCTGCAAGC        TTTTTGTTATCCTTT 100 31
LT978_RS15065 3076148 .. 3076160 +  -6.3  -3.56378   AAACGGAAATAAAAG                CCAAT CCT ATTGG                TATTCTGTTTTGAAG  62 41
LT978_RS15070 NONE
LT978_RS15075 3076570 .. 3076595 + -13.3  -5.42259   CCCGCTAATACGAAA         TCCCCGCCTCT GTAT AGAGACGGGGA          TTTTTTTACAACTCG 100 33
LT978_RS15095 3081472 .. 3081492 + -10.4  -5.95539   CATAGAGATGAAAAA           GGCCTGCCG GTAT CGGC-GGCC            TTTTTTTGTTTGACA 100 36
LT978_RS15100 3083513 .. 3083548 +    -6  -3.27525   TCGCGGTACGGCGTA    TCAAGCTGACTGGCCG ACAT CGCTCTGACAGCTTGG     TTCAGTTTAGCCGGA  57 376
LT978_RS15130 3089129 .. 3089153 +   -10  -3.48766   GCATAAACAAAACGG         GGCGGCTCTGT ATCT GCAG-GCCGCC          TGTTTACGTTCTGAG  79 35
        corA 3113557 .. 3113575 +  -7.4  -5.75342   AATATTTTCAAGTAA             GAACGGCT GCC GGCTGTTC             TTTTTTTTGAGAAAA 100 26
LT978_RS15235 NONE
LT978_RS15240 3115184 .. 3115208 + -11.5  -4.36914   TATCAAATAACAAAA          CACCTCTCC ATTACCA GGAGAGGTG          TTTTCTACAGGCGCG 100 31
       yfkAB NONE
LT978_RS15260 3118393 .. 3118416 + -11.1  -6.04953   ATCACACACAAAAAA          GCTGATTCC CGAACC GGAATCAGC           TTTTTTTATTTATCT 100 21
LT978_RS15275 3121688 .. 3121711 +   -11  -4.12254   CGGCCACATAAAAAA          GCCGCCTG ATCTGAGC CAGGCGGC           TTCTTTCTAGTGGTA  86 30
LT978_RS15295 3123915 .. 3123937 + -12.7  -5.37593   AATAAACCCATGTCA           GACCTGCCG AAAAA CGGCGGGTC           TTTTTTGATTTAAAA 100 36
LT978_RS15300 NONE
        aroD NONE
LT978_RS15310 3127185 .. 3127213 + -12.4  -4.60808   CCTATTGTGACAGAA        GCGCCGAAGGAC AATCC GTCTTCCGGCGC        TTTATCTTTTTCTCC 100 41
LT978_RS15315 3128326 .. 3128351 + -11.8  -4.66537   ATCTTCACAAAAAAA         GCGGAACGCC TGATAC GGCGCTCCGC          TTTTATATTACGCAA 100 13
LT978_RS15325 3133425 .. 3133451 + -15.3  -4.84359   CGGTTCATCCCAAGA         GCTCTCCTGAT CTGAT ATCAGGAGAGC         TTTTTCTGCCGGTCC 100 60
LT978_RS15330 NONE
LT978_RS15335 3135500 .. 3135522 + -16.3  -5.84432   AAATAAACATTAAAA           GCTGCCGGG ACACG CCCGGCAGC           TTTTTTTATCTTATA 100 28
LT978_RS15360 3140766 .. 3140784 +  -3.1  -3.52117   ATTACGCCGGTGCCG             CCCATTA TAGAT TAAAGGG             GTTTTTATGAATGCC  49 11
LT978_RS15365 NONE
LT978_RS15370 3141495 .. 3141517 +   -12  -3.07891   TATAAAGAGCCGGCT           TACGGGCGGC CCA GCCGTCTGTA           TACTTTCTCCTTATA  87 36
LT978_RS15380 3144061 .. 3144084 +   -14  -5.47159   AAAGAATAAACAAAA          GCCAGATCAT TGAT ATGATCTGGC           TTTTTTATGTTCAGC 100 32
         map NONE
LT978_RS15400 3147318 .. 3147342 + -15.7  -5.31877   CTTCTCGTCAAACTT          GCCGGACACTG ATA CAGTGCCCGGC          TTTTTTATGCTCCGT 100 14
LT978_RS15405 NONE
LT978_RS15410 3147891 .. 3147914 + -14.6  -5.72616   GCATAACGTAAATCA          GCCGTGCTGT CAGT GCAGCACGGC           TTTTTTTCTATACAT 100 35
LT978_RS15420 3149216 .. 3149226 +  -2.4  -5.04385   GCGGAAATCCCCATG                 ACCG AAG CGGC                 TTTTTTGAGCATATC  73 320
LT978_RS15465 3166642 .. 3166666 +  -4.9  -2.96609   CCATGTGTGAAAGAG          CACGTTCGGCA AAT TTCCGGGTGTG          ATATTTTCTTGAATG  51 49
LT978_RS15495 3171781 .. 3171798 + -11.3   -5.7946   ACGCATATAAGGAAA             GAAGGGC CCTG GCCCTTC              TTTTTTTGTTGCCGG 100 43
LT978_RS15500 3172929 .. 3172947 +  -7.4  -4.72556   TGATGATGAAAAAAA             GGAGGG CTTTGTC CCCTCC             TTTTCTGCTTTTTCG  81 43
LT978_RS15515 3176353 .. 3176378 + -13.3  -5.85737   CTGTAAACACAAAAA         GGAACTCCCGC CCGT GCGGAAGTTCC          TTTTTTTCTTAATGT 100 35
LT978_RS15535 3181375 .. 3181403 +  -7.4  -4.87291   ATAACATCGAAAAAA        AGAGCTGCCC CCGTATGAA GGGCAGCTCC        TTTTTGATTACGCTG  83 37
LT978_RS15555 3186407 .. 3186437 + -13.5  -5.10029   ATAAATAAAAAGGGA       GGCTCTTTTTTCT GTTTG AGAAAGAAGAGCC       TTTTTTGCACTTGAT 100 33
LT978_RS15560 3187752 .. 3187772 + -12.6  -4.78848   GCATTCATAAAAAAA            TCCCTGCC GAAAA GGCAGGGA            TTTTATGTTTCAACC 100 31
LT978_RS15600 3199587 .. 3199608 +  -5.9  -4.29493   ACAAGACTGACAAAA           GTCCAG-ACG CCA TGTTCTGGAC           TTTCTGTATTTAATA  70 31
LT978_RS15610 3201405 .. 3201427 + -14.8  -4.58283   GACAGAACATAAAAA           GGCGCCCTTC TTA GCAGGGCGCC           TTTTTCGCGCGATTA 100 29
LT978_RS15635 3204407 .. 3204421 +  -3.6   -3.6707   CATCTTAATTGACTT               TGAGAA TCA TTTTCA               TTTAAAATGTTGGAT  53 50
        hmoA 3204798 .. 3204822 +  -9.4   -5.8096   ACGAAAAATAATAAA         GAGCATTTGCC CCAG GGCAA-TGCTC          TTTTTATTTTTTCTC 100 30
LT978_RS15690 NONE
LT978_RS15695 NONE
LT978_RS15700 3213740 .. 3213795 + -11.4  -2.91276   AATAAACTACTTTGG CCTATAAATCAAAAATAGCTCAGC CCTTCTCC GCTGGGCTATTTTTGATAACTAGG ATTTCTCAACGACCG  82 509
LT978_RS15710 3214735 .. 3214747 +  -4.1  -2.62983   TAGGTATATTTTCAT                TGAGA TGA TCTCG                TAATATGGCGATACG  44 524
LT978_RS15745 3227527 .. 3227549 +  -7.6  -5.77632   CCGGTCTCCGTGTCA           GCAGCGCCCT TTC AGGCGGCTGC           TTTTTTTATCGTTTT 100 60
        putP 3232668 .. 3232692 +  -8.6   -5.4505   AGAAATAGACAAAAA          GCCGTCAG ATTTTATCC CTGACGGC          TTTTTTCTTCCGCAC 100 33
LT978_RS15770 3233479 .. 3233501 + -11.3  -5.90231   TACGTTATAAAAAAA          CGCCGGGCTG GATT CAGCC-GGCG           TTTTTTTATATTTAT 100 31
LT978_RS15800 3242730 .. 3242754 + -13.6  -5.09895   GCACGCATAAAAAAA         CCGC-CTGCCG TCAT CGGCAGAGCGG          TTTTTTACGTAGCTG 100 31
LT978_RS15820 3246185 .. 3246207 +   -15  -5.69473   CATCAGCAAGAAAAA           TAACAAGCCG TTT CGGCTTGTTA           TTTTTTTCTCCTGTC 100 23
        gabP 3273152 .. 3273177 + -10.4  -5.40072   CGCAATAACCGCAAA         CACCCCCCCT CAAAAA AGGGCGGGTG          TTTTTTTAACCAACC 100 33
LT978_RS15945 3274804 .. 3274823 +  -4.2  -6.02919   GTAAACAAACATCTC            CCCCTTTC TCCA GAAGGGGC             TTTTTTTATTTATCC 100 37
LT978_RS15950 3275241 .. 3275264 + -11.8  -3.82484   TCTCAACATAGAGAA          GGCCTC-CATG TCT CATGAGAGGCC          TTTGCGTTATCATGT  86 57
LT978_RS15955 3275471 .. 3275490 +  -7.8  -5.58074   TTGTTCATTAAAAAA            CACCCAGC GGGC GCTGAGTG             TTTTTTTCATGGTTG 100 30
LT978_RS15970 3278412 .. 3278426 + -11.4  -5.59357   GACACATCCGAAAAA               GAGCCG TTC CGGCTC               TTTTTTTCATCTCAT 100 60
LT978_RS15975 3279045 .. 3279059 +    -5  -3.14132   GCGCATTCAGCTGAC               GAAGGA GGA TCTTTC               TTAATGGAAAAGAGA  52 7
        rsiV 3279937 .. 3279960 +  -6.8  -5.68438   AAAGAAAGAAAAAAA          TCCATGATAT CCGC AGATCATGGA           TTTTTTCTTTCGTCC 100 39
LT978_RS15985 3282135 .. 3282153 +  -7.4  -4.85129   ATCATGACAAAAAAA             GAGGCC CAAACAA GGCCTC             TTTTTCGTATATCGT  81 34
LT978_RS16030 3292715 .. 3292751 +  -7.5  -4.15788   TTTTAAAGATAAAAA    GGTATCTTTATCAGT ACAGTAA ATTGATTAAGATACC    TTTATTGAAAAAATT  75 100
LT978_RS16050 3297884 .. 3297901 +  -5.6  -5.40072   TTAGAATAAAAAAAG             CTCTCA ATTAAA TGAGAG              TTTTTTTACAGCGCA  83 37
LT978_RS16365 3336472 .. 3336486 +  -8.6  -3.20236   ATGCTGAATAGATCA               CCTCAA AAA TTGAGG               TTAAGTGTTCAGTTG  70 76
LT978_RS16370 3337267 .. 3337284 +  -5.5  -5.47218   TACAATATCACTAAA             GTAAGCC TTCG GGCTTCC              TTTTTTTGAATACAA  83 22
LT978_RS16375 NONE
LT978_RS16380 3339199 .. 3339216 + -11.3  -3.58329   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA  83 74
LT978_RS16385 3339635 .. 3339652 +  -5.6  -5.40072   TTAGAATAAAAAAAG             CTCTCA ATTAAA TGAGAG              TTTTTTTACAGCGCA  83 37
LT978_RS16695 3378218 .. 3378232 +  -8.6  -3.20236   ATGCTGAATAGATCA               CCTCAA AAA TTGAGG               TTAAGTGTTCAGTTG  70 76
LT978_RS16700 3379013 .. 3379030 +  -5.5  -5.47218   TACAATATCACTAAA             GTAAGCC TTCG GGCTTCC              TTTTTTTGAATACAA  83 22
LT978_RS16705 NONE
LT978_RS16710 3381025 .. 3381035 +  -8.2   -4.6971   TGTCAGGCATTCCTG                 CGCC GCC GGCG                 TTTTCTTCCGGTTTG  88 154
LT978_RS16725 NONE
LT978_RS16730 3384105 .. 3384130 + -14.9  -5.67967   AATAATAAAAGAAAA         GCCATTTCTCA TCAT TGAGAAATGGC          TTTTTTTATGCTGAT 100 36
LT978_RS16755 3388325 .. 3388343 +   -11  -5.24129   AATAGAAAAAGTCAA             GCACCTCT TTA AGGGGTGC             TTTTTTATCCACAGC 100 36
LT978_RS16830 3401438 .. 3401458 +  -9.7  -5.52384   AGGCTTAACACAAAA            GGACGGACA CGC TTTCCGTCC            TTTTTTTGATGCCGA 100 33
LT978_RS16835 3402397 .. 3402425 + -16.9  -4.89852   GATATGAACTTGTAA        CAAAAAACGCCTG TTT CGGGCGTTTTTTG        TTTTTCTGAATATGA 100 26
LT978_RS16840 3404201 .. 3404232 + -13.9   -3.6944   GTGATAAATGACGAA      TGCCGGAAAGAAG TATGGT CTTCTTTCCGGTA       TATTTATGTTAAGGG 100 30
LT978_RS16845 3404892 .. 3404911 +  -4.3  -4.57073   AGAAGTTTGCAGAAA            TGATTGG CGGAGA CCGATCA             TTTTTGACCGCCGTG  68 23
LT978_RS16850 3405294 .. 3405313 +  -3.6  -4.15044   ACAAGGGGTGAACAT            TAATGGCA TGGC TGCTGTTA             TTTATTGCCGGAGCG  59 23
LT978_RS16855 3405640 .. 3405664 +   -10  -5.70829   TTTTTAAATAAAAAA          CAAAGGACCC TAAGC GGGCCCTTTG          TTTTTTTATGCTGTT 100 55
LT978_RS16875 3409898 .. 3409939 +  -7.4  -5.45802   TCCGCATAAATGTGA GACCGCAAAAAAGCCAAAGG AGTT CCTTCGGC-TTTG-GCGGTC TTTTTATTTTGCGGC  91 32
LT978_RS16885 3410891 .. 3410913 + -15.6  -5.11836   TTGACTTTTCTATTA           CCGCCGTCTT CTC AGGACGGCGG           TTTTGTTTTGCATGT 100 37
LT978_RS16900 3413200 .. 3413229 + -11.6  -4.74453   AAGCCATTATAAAAA       GCCTGTTTCC-CT TTGGC AGAGGAAACAGGC       TTTTTCCATGTATTA 100 41
LT978_RS16915 3416508 .. 3416533 +  -6.8  -5.21709   GTTAATACGAAAAAA         CCGC-GGGCAG GAAAA CTGCACAGCGG         TTTTTTCGTCTCAGA  88 36
LT978_RS16940 3420708 .. 3420725 +  -5.5  -3.62046   GATAATGGACGACGG             TCGACGG ACTA CGGTCGA              TTGTTAAAAACCTGA  59 101
LT978_RS16945 3421542 .. 3421561 +   -15  -5.55695   TATTTTAAACTGAAA            CGGGAGGC GGCC GCCTCCCG             TTTTTTCTGTTCTTC 100 33
        fabF 3423774 .. 3423793 + -10.8  -5.42514   CGGGCATCAAAAAAA            GGAGTGAA TCAT TTCACTCC             TTTTTTGCTTTCTCC 100 41
LT978_RS16970 3427418 .. 3427440 + -11.3  -5.80364   AAATGAAAAATAACC           GCCTGCAGT GTATA GCTGCAGGC           TTTTTTTATTCGGCT 100 28
LT978_RS16975 3428281 .. 3428303 +  -8.5  -5.67063   CACAGGTACGGCTAA           TCCTTCCAA ATCAA TTGGGAGGA           TTTTTTTGTCCTCCC 100 245
       abc-f 3429978 .. 3429994 + -12.3  -5.07652   AAATGAATGTAAAAA              CCCGTGA TTG TCACGGG              TTTTGTTTTGGAAAG 100 35
LT978_RS16985 3430835 .. 3430853 +  -8.9  -5.17786   CAGCACATAAAAAAA             GCAGATC ATAAC GATCTGC             TTTTTCATTTTATTC  91 31
LT978_RS17005 NONE
LT978_RS17010 NONE
LT978_RS17015 NONE
LT978_RS17020 NONE
LT978_RS17025 3437886 .. 3437906 + -14.1  -4.68479   AAATAGAGCGAAGAA            GGCAGAACA ATT TGTTCTGCC            TTTTCATTATTTTCT 100 225
LT978_RS17035 3440009 .. 3440031 +  -4.8  -5.45726   TTTCACCAAAAATAA           GCCGTCAG GACCAAG CTGACAGC           TTTTTTTGGGGTGTA  82 44
LT978_RS17040 3440591 .. 3440612 +  -8.1  -4.64598   ATAATCAGAAAAAAA           CATACC-GCA TGC TGCCGGTATG           TTTTTAACATGCTTG  86 37
LT978_RS17050 3442758 .. 3442773 + -11.8   -5.9362   TCATGAAAGAAAAAA              GGCGCC GAAC GGCGCC               TTTTTTTATCTTTTA 100 35
LT978_RS17065 3445925 .. 3445946 + -10.3  -5.40072   AATTCTCATAAAAAA           CATACCAAT ATCT ATTGGTATG            TTTTTTTCAGCCCAG 100 39
LT978_RS17105 3451341 .. 3451355 +  -7.8  -2.61264   ATGCAAAATGCAGGA               TGGCTC CTT GGGCCA               CTTCTACATAAAAGA  62 99
LT978_RS17160 3463073 .. 3463119 + -17.6  -4.00589   TAAAAAACAAAAAAA CAAAGAAAGACAGCACTGACTG ATT CAGTAATTGCTGTTTTTCTTTG TTTCATGTGTTTTAG 100 7
LT978_RS17185 3468582 .. 3468599 +  -8.5  -4.90266   CAAATTCTAATTCTT             CGTTTAC TGTG GTAAACG              TTTTTGATTCATAAG  88 358
        cotR 3470037 .. 3470061 + -10.1  -4.77157   ACAATGAACAAAAAA          TACCAAGGG ACTCAAA CCCTTGGTA          TTTTTAATGCGTTCA  91 62
LT978_RS17200 NONE
LT978_RS17205 3471545 .. 3471561 +  -2.2   -5.4477   TGAACCGTAGGAACG              GTGGCT AAAAG AGCTGC              TTTTTTTGAGCCTTT  79 445
LT978_RS17265 3480128 .. 3480149 +  -4.4  -2.79183   TATAAACAAAAAATA           CCAAAGGT GTCAAA ACCCTTGG            TATCATAGGGATCGG  48 414
LT978_RS17280 NONE
LT978_RS17285 3482579 .. 3482606 + -11.4  -3.08813   AAATAAAAAACAAAC        AGATCCACTCAA ATAA TTGAGTGGATCG         TATATTGGAATAACG  83 79
        cmpA 3489559 .. 3489578 +  -6.4  -5.09259   TTTCTACAGAAAAAA            ACACTGCT CGTA AGCAGTGC             TTTTATTTTACCATA  83 13
LT978_RS17435 3501033 .. 3501053 +    -9  -4.81551   CGTGCAGCAAAAAAA           GCGG-CGGT ATTA ACCGTCCGC            TTTTTCATATGAATA  88 13
LT978_RS17465 3507956 .. 3507983 +  -9.3  -4.71776   CAGGCTCTACATGAA        CATGGACATGA GTCACA TCATGTTCATG         TTTTATTGCATATTC 100 69
LT978_RS17475 NONE
        fbpB 3509332 .. 3509348 +    -8  -6.13503   AGCCATACATAAAAA              GAGCCT TTTTC AGGCTC              TTTTTTTTATTGCTC 100 29
LT978_RS17525 NONE
LT978_RS17530 3519744 .. 3519757 +  -5.9  -5.71712   GACGAAAATAAAAAA               GCCTC TAAA GGGGC                TTTTTTTATGTGCGC 100 30
LT978_RS17555 NONE
LT978_RS17560 3523106 .. 3523127 +  -4.3  -5.01535   CGGAATATAGAAAAA           CCCCGCTCT CAAG AGAACGAGG            TTTTTCTGCTTATAA  73 325
LT978_RS17575 3525427 .. 3525456 + -15.1  -4.07885   ATTCATTCCGTTAGA       AAAAAACCGGCCG TCAG CGGCCGGTTTTTC        TTTTGACGCCGGGTG 100 27
LT978_RS17580 3525796 .. 3525818 + -10.7  -5.81412   TCACGCAAACGAAAA           TAAACAGGC ATGCC GCCTGTTTA           TTTTTTTTACCTAAG 100 23
LT978_RS17585 3526646 .. 3526672 + -10.3  -4.86621   TGAAGTAAATGCAAA         GTGCTGTTAGA TTCAC TCTAATAGCAC         TTTTTCATTGGAGAT  93 75
LT978_RS17590 3527577 .. 3527590 +  -2.4  -3.06696   TTTTATATAACATCC               TGAC TTTTCC GTCA                TATATTCAAACGAAA  43 352
LT978_RS17595 3527975 .. 3528019 + -24.7  -2.77235   AAGCAAGCCGCTCAA CAAACAAAGGAGCTGTCGAGA TCT TCTCGATAGCTCTTTTGTTTG TCCTTGAATGATTGA 100 135
LT978_RS17650 3535362 .. 3535384 + -13.6  -5.24129   GTAAATAAATAAAAA           TAAACAGGCA TGC TGCCTGTTTA           TTTTTTATAACCACC 100 107
LT978_RS17705 3550329 .. 3550349 + -11.2  -5.18357   ATTATCAATAAAAAA            GCTCCTCT TCTGC AGAGGAGC            TTTTTTCATGCGTTA 100 30
LT978_RS17755 3562308 .. 3562336 +  -8.8  -2.93393   TTAAGGAGCACGAAA        AGCGCGCTCC CCATGAAAA GGAGCGCGCG        GTTTATGAGCTGGCG  69 377
LT978_RS17805 3569646 .. 3569663 +  -9.8  -5.44119   CACGCTTGTCCGAAA             GCCGCC GGTGGA GGCGGC              TTTTTTTACGATGGC 100 41
LT978_RS17835 NONE
LT978_RS17840 NONE
LT978_RS17845 3576712 .. 3576741 +  -9.4  -5.88565   GCGTGTAAGCAAAAA      GCGATC-C-GGCTC TAAA GAGCCTGCGATCGC       TTTTTTTCTTATCCG 100 33
LT978_RS17870 3582898 .. 3582914 +  -5.7  -2.94232   CGGCGCATAAAAAAA              ACCCCGG AAT TCGGGGA              CTTATTTACCAGCGG  53 31
LT978_RS17880 NONE
        nfsA 3584436 .. 3584457 + -15.9  -5.59879   AAATAAACGTATCAG           CCTGCCGGA ACAC TCCGGCAGG            TTTTTTCTATTTCTC 100 35
LT978_RS17890 NONE
LT978_RS17895 3586913 .. 3586940 + -14.2  -5.68023   GCGGTAAACCAAAAA        GAACCCGATCAC GTAT GTGACCGGGTTC         TTTTTTTACTTCTCG 100 34
LT978_RS17920 3592313 .. 3592342 +  -4.2  -4.38219   TATGACGAGTTTTTC       GCCGGAGTCTTA CTCCCA TAGGACACCGCC        TCTTTTTTCTCTTGT  66 5
LT978_RS17925 3592542 .. 3592575 + -13.9  -5.07652   TCACTCCGTCTATAT     GAGGACGCTGCGGGT TTTG ACCTGCGGCGTTTTC      TTTTGTTTTCCGCCG 100 44
LT978_RS17950 NONE
LT978_RS17955 3598599 .. 3598623 +  -7.1  -5.42975   AAGTGAACGTAAAAA          GAGCCAGGG CTGCATC CCCTCGCTC          TTTTTATTTATATCA  91 97
LT978_RS18010 3610227 .. 3610243 +    -3  -3.86897   AGAGATTGCCTTTGA             TGACAGC CCCG GC-GTCA              TTTGTCACAGATACG  54 491
LT978_RS18020 3613363 .. 3613384 + -15.9  -5.65177   TACAATAAAAGAGAA           GCCTGCGGA ATCG TCCGCAGGC            TTTTTTTGTGCGTCT 100 33
LT978_RS18045 NONE
        tcyA NONE
LT978_RS18055 NONE
        tcyC 3619490 .. 3619519 + -13.8  -5.41746   TTTGTAGGAGCCGGA       GAAGAAGCGAAA CACTGA TTTCGCTTCTTC        TTTTTTTGGGCGGTT 100 34
LT978_RS18065 3620213 .. 3620231 +  -9.6  -6.09196   TCCGTTCATTAAAAA             CAAAGCCG AAA CGGTTTTG             TTTTTTTATTTTCGG 100 29
LT978_RS18070 3620994 .. 3621010 +  -9.4  -5.61596   GTAAGCATAGAAAAA              GGAGGG TATCC CCCTCC              TTTTTTTGTCAGCCT 100 37
        hxlA NONE
        hxlB 3650988 .. 3651013 + -13.3   -4.9934   CTGGAATGATTTGCT         GACGGCCTTCT TATC AGATGGCCGTC          TTTTTATCGTCTTGT 100 32
LT978_RS18130 NONE
LT978_RS18135 3652204 .. 3652233 + -15.2  -2.55034   GCAATGTAAAAGAAA       TCCCTGAGAGAA TCATAT TTCTCTCAGGGA        ACTTTTATAAACTTT 100 32
        nasD 3658716 .. 3658726 +  -6.8  -3.14564   GATCTATTCGAAAAT                 GTCG TCA CGAC                 TTCATAAAACAGTAA  60 8
        nirD 3659084 .. 3659105 +  -9.5  -3.95677   TATTGATCAAAGACC           GGATCACTT TTCC AAGTGGTCC            TTCATTTTTTAAATT  81 35
        cobA 3660597 .. 3660628 +   -13  -2.95245   ACGCCGGAATGCTTT      TCTGACCCCCGG-GC CCA GCATCGGGGGTCAGC      CCTTTTTTATTGTGT  91 42
LT978_RS18230 3672385 .. 3672404 +  -8.6   -6.0427   CTGTTTTTTCCCGCT            GACTCTTC GATC GAAGGGTC             TTTTTTTTGTATCAT 100 24
        tmrB 3673092 .. 3673105 +  -8.1  -4.17355   TCAATAAATAAAAAG               CCCCT CTGA AGGGG                TGTTTTTTCAAATTA  79 82
LT978_RS18240 3673516 .. 3673535 + -12.2   -5.3671   AACGATAAACAATAA            CCTCCCTT TCAA AAGGGAGG             TTTTTTCATTCTATT 100 42
LT978_RS18255 3676732 .. 3676757 +  -3.9  -3.84246   TGATCAGCCGGCTCA         TGTTTCGTCCG AACG CGGTTGAATCA          TTTAATCCTTCGAAA  57 209
LT978_RS18275 3680185 .. 3680212 +   -15  -5.69793   AGCGAATTAAAAAAA        GCAGTACATGGC GTTT GTCATGTACTGC         TTTTTTGTTTACTCT 100 31
LT978_RS18300 3686919 .. 3686938 + -10.7  -5.66868   GAAGCATAAAAAAAA            GCAGCCC GTTACA GGGCTGC             TTTTTTTCATTACTT 100 32
LT978_RS18355 3698323 .. 3698372 + -10.6  -5.43514   ATATTTCTGTAAAAA AAGCCGTCAAACGGCGCAGCAG ATGAGA CTGCTGCACCGCTTAACGGCGG TTTTTTCGTTCTTTT 100 29
LT978_RS18375 NONE
LT978_RS18380 3702127 .. 3702165 +  -6.7  -4.36411   TAAACTCTTGTTTCG   TAAGGGCGGAACGTGAT GCGGG ATTCCGTGCCGCCGTTA   TTTTCATAGTTGCTG  74 38
LT978_RS18400 3706821 .. 3706835 +  -4.2  -3.66908   AACCTGCCCCTTCCG               TCCGTT TTC AGCGGG               TTCATTTTAAAAAAC  55 356
LT978_RS18415 3710581 .. 3710602 + -11.7  -6.09196   CCTGACAGCAAGAAA           GGAAATAGC GCAG GCTATTTCC            TTTTTTTATTTTCAC 100 36
LT978_RS18440 NONE
      lmr(B) 3717065 .. 3717089 + -12.2  -5.71712   TCATTCATAAGAAAA          CAGCAGGCTC CCCGT GAGTCTGCTG          TTTTTTTATATACCG 100 31
         pcp 3719163 .. 3719173 +  -2.4  -3.53224   TGTCAGAAACATGAC                 GGCC AGA GGCA                 TTTCAAACAAAAATC  47 247
LT978_RS18480 3722944 .. 3722976 + -11.5  -6.04324   GGATAACGGCCTTCA      GCTTGTAGAGAAAAT GAT GTTTTTTCTGCAAGC      TTTTTTGTTTTTTGC 100 54
LT978_RS18510 3727241 .. 3727273 + -17.3  -5.86976   AAGAATAAAAAAGCA      GCTTGTAGAGAAAAC GAT GTTTTTTCTACAAGC      TTTTTTGTTTTGTGC 100 33
LT978_RS18535 NONE
LT978_RS18540 3734020 .. 3734045 + -11.2  -5.01732   ATTTCCTAAACAAAA         GGTGTTCGGG CAGCGT CCTGAACACC          TTTTTTCCGCCGGTT  93 32
        mmuM 3735126 .. 3735150 + -12.2   -5.4505   GCCGGTTCGCCGGAA          TCTCGTGCCG TTCGC CGGCATGAGA          TTTTTTATTAGAACG 100 75
LT978_RS18550 3736603 .. 3736624 +  -9.5  -5.05505   CAATAACCAAAAAAA           GAACCC-TGC GGC GCAAGGGTTC           TTTTTCATTTATACT  91 35
        gltP 3739332 .. 3739350 + -10.3  -4.70583   TGTAAACACAAAAAA             GACCACC TCATT GGTGGTC             TTTTCTATTAATCAA  91 36
LT978_RS18610 3749160 .. 3749196 + -11.7  -5.00884   TGAACAGGCAGCTCC    TTGCTCCAGGAATGCTC AAT GAGTATTCTTGGAGTTA    TTTTTTAAGGAGGAT 100 42
LT978_RS18615 3749645 .. 3749661 +  -5.1  -5.67063   ATGATCAGTTAAAAA              CCCCT CTGCTTA AGGGG              TTTTTTTATGATGCA  85 29
        hpaB 3751273 .. 3751295 +  -8.5  -5.80951   TCTGCTTTTGATAGC          T-GGATCGGC TGCC GCCGATCCTA           TTTTTTATTTTGGCT 100 61
        glpT NONE
LT978_RS18635 3754194 .. 3754223 + -13.7  -5.41143   AAATCATAAAGCCAG       CATGGGTTCGG AGATGATG CCGAACCCATG        TTTTTTTGCCCGATC 100 32
LT978_RS18645 3756359 .. 3756387 +  -7.5  -5.60993   ATAATCTGTGCCCGG       GCTGCCCGGCCGT ATCAA ACGGC-G-GCAGC       TTTTTTTATGCAGAC 100 37
LT978_RS18710 NONE
LT978_RS18715 3767816 .. 3767835 +    -7  -5.21709   TGTTTCAAATTTAAA            GCCGGCGG TTCT CCGTCAGC             TTTTTTCATGTGCGG  91 27
LT978_RS18720 3768789 .. 3768810 +    -8   -4.7416   AACACATAAAGAAAA           GCTGACGG CATCAT TCGTCAGC            TTTTTCACCTTTTAC  84 44
LT978_RS18810 NONE
LT978_RS18815 NONE
        murQ 3785470 .. 3785503 +    -8   -4.0896   ATATTGTGCTTTTAC     GAGCCCGCGCCG TTTTCATGTT CGGCGCAGGCGC      TTTTAGGACGCGTTT  75 58
LT978_RS18825 NONE
       pbp4b 3788234 .. 3788246 +  -3.4  -4.38154   ATGAAGCCATTGAAT                GACA ACCCA TGTC                TTTTGTCCAAACTAT  62 24
LT978_RS18835 NONE
LT978_RS18840 3791465 .. 3791480 +  -6.2  -4.44974   TACTGACAACATTCG              TGTTAC ACGT GTAACA               TTTTGTCGCATTTCA  72 35
LT978_RS18845 3793180 .. 3793207 +  -3.6   -3.2818   TTATCCGAAGATCGT        CCATGG-TAAT GCCGGAA ATTATCCATGG        TCTTATCCCTATTCA  49 17
LT978_RS18850 NONE
LT978_RS18855 NONE
        feuC NONE
LT978_RS18865 3797005 .. 3797024 +  -9.3  -5.58074   GCTGTACGGAAAAAA            CCGCTCA CGTGAC TGAGCGG             TTTTTTTCATACTTG 100 10
LT978_RS18895 3804446 .. 3804470 + -15.9  -4.20086   AATGTAAACAAAAAA          GCTAATGCCTT TGA AAGGCATTAGC          TTTATATATCTATGT 100 34
        pdaB NONE
        gerD 3823245 .. 3823267 +  -6.1  -5.46657   AAGCCAATAAAAGGC           CGGGCCGTG TTGAT CCCGGCCCC           TTTTTTATTCAGCTG  85 31
LT978_RS19025 3826214 .. 3826235 +  -2.1  -5.30339   AAAGCCGCAAAAAAA           CAGCACCTC TGAC GGGATGCCG            TTTTTATATTTTAAT  72 14
        abrB 3936872 .. 3936897 +   -12  -6.02345   TATTTCATACAAAAA         CCGTTCTTGT TACGAC ACAAGAACGG          TTTTTTTTATGATTG 100 43
LT978_RS19820 NONE
LT978_RS19825 3957720 .. 3957743 +  -4.6  -5.16237   TCATATTGTAAAAGA          GACGTTTC GTTAATTG GAAGCGTC           TTTTTTCATGGGCTT  75 13
         dgk NONE
         dck 3959112 .. 3959139 +  -8.5  -5.50499   AATAAAAATAGCAAA        GCGATTTTCCC CGAACA GAGAAAATCGC         TTTTTTTGCATATAA 100 36
LT978_RS19845 3960675 .. 3960695 + -10.3  -5.05228   CCGGGCAGCAAAAAA            GGCGCGCCT CTA GGGCGCACC            TTTTTATGGTTTGAT  93 13
LT978_RS19875 3968020 .. 3968040 + -15.5  -3.61654   CTTGTAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 34
        dnaN 3979705 .. 3979726 -  -9.4  -4.70583   CTGATGAATAGAAAA           GCTGCCGA ACTAAG CCGGCAGC            ACATTCTGTTTGATT  90 39
        rlbA NONE
        recF NONE
LT978_RS19915 3977993 .. 3978007 -  -2.1  -3.61654   TATATTCATTGTAAA               GATCC GCTAA GAATC               TATTTCTAACATAAA  48 17
        gyrB 3975989 .. 3976014 -    -7  -5.24129   CGCTTTGAGAAAAAA         GCCTTATTTC TTAACG AAAATAAGGC          TTTCTTGGTTAAATA  91 34
        gyrA 3973312 .. 3973345 - -13.3  -2.87564   TCATTTCTTTATATA     GTAAAAGCGCAGCCTG TTG CAG-CTGCGCTTTTTC     GTTTATACTTCTTCC  93 28
LT978_RS19900 3971493 .. 3971505 -  -6.3  -4.09243   TATATTCCGTTAAAA                TCCTT AGA AAGGA                GGTGATCCAGCCGCA  68 20
LT978_RS19895 NONE
LT978_RS19890 3971162 .. 3971172 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 86
LT978_RS19885 3968175 .. 3968192 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3968020 .. 3968040 - -15.5  -5.63517   CTTGTAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
        guaB 3965429 .. 3965453 -  -9.3  -6.02914   TCGATATAAAAAAAA          TAGACAGAGTC AGC GACCCTGTCAA          ATGTTTTTTATTTGT 100 46
        dacA 3963955 .. 3963978 -    -6   -4.4773   GTATATTAAGCAAAA          GAGCCCTAAC TTTC ATCAGAGCTC           TTTCTTATTTCTTAA  72 37
        pdxS NONE
        pdxT 3962016 .. 3962047 - -15.2  -5.80951   ATCGAAAATAAAAAA      GAGCCCTCATCCCC TAAA AGGGACGAGAGCTC       TCGCGTTGCCACCCT 100 274
        serS 3960675 .. 3960695 - -11.8  -5.14563   CCGGGCAGCAAAAAA            GGCGCGCC TCTAG GGCGCACC            TTTTTATGGTTTGAT 100 29
LT978_RS19840 3959159 .. 3959181 - -16.4  -5.36441   TTTGCATATAAAAAA           TCCGCTGCAT CAG ATGCAGCGGA           CAAAACAATCTCCAA 100 76
        tadA 3955186 .. 3955200 -  -5.8  -4.67048   GCACGGCAAAATAAA               TATCAA ATT TTGATA               TGCGCACCATTCATG  74 86
         ffs 3954868 .. 3954888 - -11.9  -5.24989   TCATATACGAAAAAA            CTCACCTGC GTA ACAGGTGAG            TCTGAAATTTGATGA 100 49
        dnaX NONE
LT978_RS19800 NONE
        recR NONE
LT978_RS19790 3951821 .. 3951876 -  -7.7  -2.86125   GATAATGAAAAAAGG CTCCATGAATCTTCCCCCTCGCTTGT TTAGT ACAAGCTTATGAGAAGATTC-CGGAG AATAGACCTCTTACT  62 36
LT978_RS19785 3951401 .. 3951411 -  -3.2  -3.55444   TGTTTAGTTTTCAAA                 GAAC TTT GTCC                 ATCGCTCTTGAAGCG  51 177
LT978_RS19780 3949758 .. 3949770 -  -6.3  -4.09243   TATATTCCGTTAAAA                TCCTT AGA AAGGA                GGTGATCCAGCCGCA  68 20
LT978_RS19775 NONE
LT978_RS19770 3949427 .. 3949437 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 86
LT978_RS19765 3946439 .. 3946456 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3946284 .. 3946304 - -15.5  -5.93252   TTCAAAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
LT978_RS19755 3945937 .. 3945952 -  -3.2  -5.81412   TTCAGGCAAAAAAAA              GACCCT TTTC AGGGTT               AAGAATATAACGTCG  88 24
LT978_RS19750 NONE
LT978_RS19745 3943984 .. 3943994 -    -4  -3.57144   GTGTCCATTTTTAAA                 CAAA TCC TTTG                 CCTGTCTTTCTTATT  53 85
LT978_RS19740 NONE
         tmk NONE
        darA 3941514 .. 3941530 -  -3.7  -4.17089   GTCAAATCCTTAAAA              TTGATGA AAT TCATCGA              CCGGGAGGACAAAGA  59 3
LT978_RS19725 NONE
        holB NONE
        ricT NONE
        yabA 3938821 .. 3938843 - -10.6  -4.57569   GCACTCTTTGAAAAA           GGCTTCCG ACATCAG CGGAAGCC           TTTTCCTTATTTTTT  89 32
LT978_RS19705 NONE
LT978_RS19700 NONE
        rsmI 3936872 .. 3936897 -   -12   -4.9792   TATTTCATACAAAAA         CCGTTCTTGT TACGAC ACAAGAACGG          TTTTTTTTATGATTG 100 32
        metG 3934042 .. 3934083 -  -8.9  -4.56597   TTTCTTGTTGAAAAA CAAAAGGTGTTCGACG-GAA TGT TACACGTGAAACACCTTTTG CCCCTATTATTTAAT  86 32
LT978_RS19680 NONE
LT978_RS19675 3931754 .. 3931774 -    -9  -5.68023   TTATAACGAAAAAAA            CAGAGGGC GCAAA ACCCTCTG            AATGAATCGGAATTA 100 38
        rnmV NONE
        rsmA 3930212 .. 3930229 -  -7.7  -5.48213   GACGCAAAACAAAAA             GCCCTCT TAGA AAAGGGC              TTTATGCAATCCGTT 100 14
        yabG 3929137 .. 3929160 -  -8.2    -3.694   ATGTAAAATAATTAA          CCCGCATA GCGAAATA TATGCGGG           TTTTATCACTCATCC  73 35
LT978_RS19655 3928672 .. 3928694 -  -8.5  -5.49568   AAGGCAAAACAAAAA           GCAGTAAAC AAAAG GTTCACTGC           CCATTAAAATGCTAC 100 29
LT978_RS19650 3928315 .. 3928337 - -12.7  -5.37043   AGCCGATAGAAAAAA           CCGGGGAAC GGATT GTCCCCCGG           GCCACTGCATTATCG 100 35
        ispE NONE
        purR NONE
LT978_RS19635 3926010 .. 3926032 -   -12    -5.626   TACTGCATAAAAAAA           GTGATCCCGG AGA CCGGAACCAC           TTTTCTGAGATTTAA 100 37
       spoVG 3925496 .. 3925538 - -10.6  -5.13473   ATCAGATTTAAAAAA GGACTGCCGGAAAAGGCC TTGTGTC AGCCTTTATCAGCAGTCC TTACATTTTGTTATG  93 42
        glmU NONE
LT978_RS19620 3922981 .. 3922995 -  -2.8  -3.50808   CCTATTAGAACAATA               CCCA CAATAAC TGGG               ATTTAAACCTTAAAG  47 48
LT978_RS19615 3922291 .. 3922315 - -10.1  -4.46926   CATTCTAGCACAAAA          GACGTAACC TCGGGCG GGTTACGTC          TTAAAGCGCTTATTG  89 35
         pth NONE
LT978_RS19605 3921351 .. 3921379 -  -8.9   -5.2015   GCAAGAACAGAAAAA        CGCTTTGGTCTAG AAT CTACACCAAAGCT        TCTTATTGAATAAAT 100 28
         mfd 3917751 .. 3917761 -    -4  -3.83205   ATCCGTCACATCAAA                 TGTA ATA TACA                 CCAGAGAGTAACAAT  55 43
       spoVT 3917043 .. 3917068 - -10.5  -4.93316   TAAGAATATGAAAAA         GAACAGCACTT GTAT AAGAGCTGTTC          TTTCCCCGTTTTTTT  93 63
LT978_RS19590 NONE
        mazG NONE
LT978_RS19580 NONE
        yabP NONE
        yabQ NONE
LT978_RS19565 3912193 .. 3912210 -  -3.5  -2.90075   GTTTGTTTAATTATA             CCTAAAT AAAA ATTTAAG              TGTCAACAAGGCTAC  45 37
LT978_RS19560 3911705 .. 3911728 -  -5.3  -5.71712   GCGTATACAAAAAAA          GCACCCG-CT GGGAT AGACGGATGC          TCCATGTATTTATAG  95 52
LT978_RS19555 NONE
LT978_RS19550 3911410 .. 3911432 - -16.4  -5.32699   CTAAATATGAAAAAA           TCGGCTTCTG CAA CAGAAGCCGA           TTCGCTTGATGACCC 100 32
      spoIIE 3908741 .. 3908752 -    -3  -2.90573   TGATTTATACGAAAG                GATT AAGA AATC                 TCCTTTTTATTTTGG  43 16
LT978_RS19540 NONE
LT978_RS19535 3906945 .. 3906958 -  -2.3  -4.15884   CCAAGCAAAGAAGAA               GCATG AGCG CAGGC                GTCCGGCCGACATTA  54 38
        tilS NONE
         hpt 3904882 .. 3904897 -  -3.2  -3.67878   ATCATTCCAATACAA              CCGATA ACCA TCTCGG               AAGCAGGCAGCCGAT  51 40
        ftsH 3902855 .. 3902874 - -12.1  -5.58074   GAACCAGTAAAAAAA            CCGCCGG TATACG CCGGCGG             TTTTCATATCAGAAA 100 46
LT978_RS19515 NONE
        hslO 3901069 .. 3901094 - -14.1  -4.02581   TTTTACAAAATAGAA         CAACCCGCTAA AGAG CTAGCGGGTTG          TTTCGTCACGAAGCT 100 15
LT978_RS19505 NONE
        cysK 3899112 .. 3899131 - -10.7  -5.64274   TCAGGCACAAAAAAA            CTCCCGG ATACAG CCGGGAG             CCGTGTGTATGTCTC 100 40
        pabB NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
LT978_RS19465 NONE
        dusB 3893158 .. 3893178 - -12.6   -5.1286   GAAAAAGCAGAAAAA            CTGCCAGC GGTAA GCTGGCAG            TGAGCAGCAATAGAG 100 49
        lysS 3891572 .. 3891601 -   -10  -5.00616   CTTGTTTCTAAAAAA       GCGCCG-TACTGC AATAA GCAGAAACGGCGC       CTTCCCTTTTATTAG  93 37
LT978_RS19450 3889572 .. 3889582 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS19445 3886585 .. 3886602 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3886448 .. 3886463 -  -6.2  -2.88579   CTAATCCTCCATATA              TTACAC TTAC GTGTAA               TGGCTTGGCGGCGTC  54 28
LT978_RS19435 NONE
LT978_RS19430 NONE
LT978_RS19425 NONE
LT978_RS19420 3886067 .. 3886078 -  -4.4  -2.87564   CTACTTCCGCATACA                GGAT AACT ATCC                 TGTATAATGCGGGTG  48 33
LT978_RS19415 NONE
LT978_RS19410 3885887 .. 3885897 -  -2.4  -3.58208   GCGCATAATAATGAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  48 15
LT978_RS19405 NONE
LT978_RS19400 3885718 .. 3885732 -  -4.2   -3.0464   AAGTGATCGGGAAGA               CAGGAT TCG AACCTG               CGACCCCATGGTCCC  49 1
LT978_RS19395 3885462 .. 3885478 -  -2.3  -4.17132   AAACTCTCCAATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  54 173
LT978_RS19390 3883747 .. 3883757 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS19385 3880759 .. 3880776 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3880604 .. 3880624 - -15.5  -5.69068   GAAAAACACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
        ctsR NONE
LT978_RS19370 NONE
LT978_RS19365 NONE
        clpC 3875813 .. 3875842 -  -9.4  -3.22874   CTCTATATAACAAAG       TGAGGCATACAC TCGCTT ACGTATGCCTCA        TGTTTGTCACTATAT  75 40
        radA NONE
        disA 3873271 .. 3873281 -  -4.6   -2.6043   CTAACAATAATATAC                 CCGG ATT CCGA                 CAGGTTTAAGCGATA  47 42
LT978_RS19345 3872091 .. 3872102 -  -4.4  -3.34517   ACTCCCTCTTAAAGA                GCTT TCTC AAGC                 AGCTTGGGCTTGGCA  52 7
        ispD NONE
        ispF NONE
        gltX 3869105 .. 3869135 - -12.7  -5.93809   CGCCTATAAAAAAAA      GCGCCTCTG-CATG TAAA CATGACAGAGACGC       TTTTACCGCGCGGTT 100 251
        cysE NONE
        cysS NONE
LT978_RS19315 NONE
        rlmB NONE
        rae1 3865319 .. 3865330 -  -2.2  -2.57013   CGTCAACCTAATCCA                GACCG CCT CGG-C                GCCACTTTTCAAACG  40 6
        sigH 3864556 .. 3864572 -  -5.1  -3.05579   TAATAAAATAGCACA              GTCAGAA AAA TTCTGTC              AATATGACACAGAAA  52 45
        rpmG NONE
        secE 3864042 .. 3864056 -  -8.6  -5.79595   GTGTAAAACAAAAAA               TAGGCT CAG AGCCTA               TGAATCCTTTTTTCA 100 114
        nusG NONE
        rplK 3862811 .. 3862840 - -13.7  -3.72027   ACCTCCCACGAATAA       GGGTTGCGAACTT GTGA AAACTCGCAACCC        GACAAGAAACAAATT 100 39
        rplA 3861885 .. 3861906 - -14.5   -4.9792   GATTTCATATAAAAA           GCCTCCATG TGGA CATGGAGGC            TGTATATACAAGCAT 100 180
        rplJ NONE
        rplL 3860850 .. 3860870 -  -7.5  -5.43974   AAAAGCAAAGAAAAA            GCCCGCCTC ATA AAAGCGAGC            TTCCCCTACAGGCAA 100 48
LT978_RS19260 3860039 .. 3860059 -    -4   -5.8901   AGACAAAAGAAAAAA            GGGTTTCT AATTA AGAAAACC            ACATCCAAAAACAAA  93 162
        rpoB NONE
        rpoC 3852664 .. 3852698 - -13.1   -3.1315   AGAATAATTGTAATA    CTG-AGGAAAAGCTGT CGAA ACAGCCTTTCCTGCAG     CAGTTTCTATTATTC  95 35
LT978_RS19245 3852246 .. 3852281 -  -8.6  -4.64763   TTAGGCAAAAAACAA    TGTCTTTACACAAGAT TGAT ATCTTATATAAAAACA     AAAAGTACGCTATAA  86 35
        rpsL NONE
        rpsG 3851246 .. 3851263 -  -4.9  -3.29471   TTTTGATTATATGAA             TC-CTACC AGC GGTAGTGA             GCAAATGCTTTGTTC  54 10
        fusA 3849050 .. 3849067 -  -6.3   -4.0827   ATAGAGTGATAGAAA             GTGAAAG CAAG CTCTCAC              TTCCTCATCTTACAA  68 75
         tuf 3847767 .. 3847788 - -11.5  -5.95539   GGGGAAACAAAAAAA           CGAGGCCCC ATAA GGGACCCCG            CATTATTGAACGAGT 100 44
LT978_RS19220 3846543 .. 3846574 -    -5  -4.82901   TCTCCGTGAGAAAAA      CCTGATCACCTTGC CATG GCAAAGCGGCCGGG       TGTGTCAGCAACCTC  72 189
        rpsJ 3846166 .. 3846180 -  -2.9  -2.77523   CTCCTATTAAGATCA               TTCTA TATTT TAGAA               TTAAAGTTTGATTTC  42 26
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 3836012 .. 3836023 -  -4.4   -3.2794   TCTTATTTAGAGGAA                TGGT TAAA ACCA                 GTCCTCTAATTTTTC  52 31
LT978_RS19105 NONE
         map 3834554 .. 3834564 -  -5.4   -4.8622   GTGCGGAATGAAAAA                 CATG TGT CATG                 GAACTCATTTCATCA  76 42
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 3832941 .. 3832974 -  -5.4  -3.66666   TTCAAAACGTCGAAA     CCTCGAATAGAATC ATATGA GATTCCATCCGAAA      TTCCCCATTGTTTAG  59 138
LT978_RS19070 3831945 .. 3831964 -  -2.9  -2.55002   AAACACACGAAAATC            CTAGTTC ACATGG AAACTAG             ATCAATCGTCTTTGC  41 27
        rplQ 3831511 .. 3831524 -  -2.4  -2.87132   GCCCTTCTTTAGATA               CACA AAAATA TGTG                ATTAAACCAATTCGA  41 27
LT978_RS19060 NONE
LT978_RS19055 NONE
LT978_RS19050 NONE
        truA 3828094 .. 3828104 -    -4  -3.34398   CGTGGGGTTGAAATA                 CATA CCA TATG                 ATATCTTATAACTTT  49 75
        rplM NONE
        rpsI 3827105 .. 3827124 -  -8.6   -5.9667   AAAAATACAAAAAAA            CCACAACC AAGA AGTTGTGG             TTTTTGCCATCCAAA 100 45
LT978_RS19030 3826214 .. 3826235 -  -4.3   -5.4477   AAAGCCGCAAAAAAA           CAGCACCTC TGAC GGGATGCCG            TTTTTATATTTTAAT  81 29
LT978_RS19020 NONE
        cwlD 3824398 .. 3824416 -  -7.4  -4.60255   AGAATCGGCGAAAAA             CCCTCC TTACTCG GGAGGG             TCTCCTTTTTCTGTA  79 13
LT978_RS19010 3823242 .. 3823265 -  -8.1  -4.76213   AGAAAGCCAATAAAA          GGCCGGG-CC GTGTT GATCCCGGCC          CCTTTTTTATTCAGC  87 32
        kbaA 3821819 .. 3821845 -  -2.2  -4.56961   AACAGTCATATAAAA        GGCG-GCGACA TTGTCC TGCTGCACGCC         TCTGATTCAGCAACA  63 158
LT978_RS18990 3819159 .. 3819169 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS18985 3816171 .. 3816188 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3816010 .. 3816024 -  -2.2  -3.03243   AGCTACTGCGGAATA               TTATAA GCT TCATAA               ACAAAAACATGGTAG  42 53
LT978_RS18975 3815903 .. 3815951 - -10.9  -3.09516   TTCCTTACCATGGAA GTGCTCTACCTGCTGAGCTATGG AAG CAATGGCTCCGCAGGTAGGACTC GAACCTACGACCGAT  80 6
LT978_RS18970 3815649 .. 3815670 -  -3.1  -3.77302   TTATGACAAAAGTAA           TTATATCAA GGTT TTGATAAAA            GTCAATACCGTTTAA  53 210
LT978_RS18965 3815468 .. 3815482 -  -8.6  -3.38178   CAATCAATTTCACAA               TATCCC GTT GGGATA               AAATGGAGCGGAAGA  74 29
LT978_RS18960 NONE
LT978_RS18955 3814983 .. 3814999 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 310
LT978_RS18950 3813269 .. 3813279 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS18945 3810540 .. 3810557 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3810379 .. 3810393 -  -2.2  -3.03243   AGCTACTGCGGAATA               TTATAA GCT TCATAA               ACAAAAACATGGTAG  42 53
LT978_RS18935 3810272 .. 3810320 - -10.9  -3.09516   TTCCTTACCATGGAA GTGCTCTACCTGCTGAGCTATGG AAG CAATGGCTCCGCAGGTAGGACTC GAACCTACGACCGAT  80 6
LT978_RS18930 3810018 .. 3810039 -  -3.1  -3.77302   TTATGACAAAAGTAA           TTATATCAA GGTT TTGATAAAA            GTCAATACCGTTTAA  53 210
LT978_RS18925 3809837 .. 3809851 -  -8.6  -3.38178   CAATCAATTTCACAA               TATCCC GTT GGGATA               AAATGGAGCGGAAGA  74 29
LT978_RS18920 NONE
LT978_RS18915 3809352 .. 3809368 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 310
LT978_RS18910 3807638 .. 3807648 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS18905 3804651 .. 3804668 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3804505 .. 3804522 -  -9.9  -5.71712   TTTTATATAAAAAAA             CCAGTTC ATCT GAACTGG              TTTAAAACAGCTTGG 100 35
LT978_RS18890 NONE
LT978_RS18885 NONE
LT978_RS18880 3799734 .. 3799751 -  -8.4  -6.25741   AAATAAGAAAAAAAA             CGGCTC TCACTG GAGCCG              TTTCCGCTTTTATAA 100 35
LT978_RS18875 3798069 .. 3798090 -  -8.7  -5.53288   TTTAACCGAAAAAAA           GCCCGGATA TATT CATCCGGAC            TTCACAAATTCTATG 100 36
LT978_RS18870 3797005 .. 3797024 -  -9.3  -5.08824   GCTGTACGGAAAAAA            CCGCTCA CGTGAC TGAGCGG             TTTTTTTCATACTTG  91 10
LT978_RS18805 NONE
LT978_RS18800 NONE
LT978_RS18795 NONE
LT978_RS18790 NONE
LT978_RS18785 3782844 .. 3782866 - -10.7  -5.61596   ATGCCGATAAAAAAA           GACACCTTT ATGCA AAAGGTGTC           TGAGACTGGGCTAGC 100 28
        sigW NONE
        rsiW 3781419 .. 3781444 -   -12  -5.60993   CGTTGCACAAAAAAA         GAGTAAAGCG ATTATA CGCTTTACTC          ATCTTCATTCGGGTC 100 20
        cdaA NONE
LT978_RS18765 NONE
        glmM 3777275 .. 3777294 -  -6.4  -3.63283   AAAGTCAAATTACAA            GGGGAC TTTCAATC GTCCCC             TCCCACATGTTTTTT  65 386
        glmS 3775387 .. 3775411 - -12.9  -5.14563   TTCCGCATTAAAAAA          CCCCTCTGGCT AAT AACCAAAGGGG          TTAAATATATTATTC 100 35
LT978_RS18750 NONE
LT978_RS18745 3772735 .. 3772745 -  -6.8  -3.54543   AGTCATCCTCGTAAA                 CTGC TTA GCAG                 TTCACTTGGGTCGTA  65 82
LT978_RS18740 NONE
LT978_RS18735 3770773 .. 3770802 -  -4.3   -3.6761   TGCCTCCAACAAATA       TTAATCCGTCTCG AAAT CAAGATGGGTTAA        AATTCCTTTAATTAG  55 346
LT978_RS18730 NONE
LT978_RS18725 3768789 .. 3768810 -  -7.3  -5.08878   AACACATAAAGAAAA           GCTGACG GCATCATT CGTCAGC            TTTTTCACCTTTTAC  85 117
LT978_RS18705 3765854 .. 3765866 -  -4.9  -4.35483   TTCCATCATAATAAA                TTTTC GTG GAAAA                TACAATTGTTTTTTT  66 281
LT978_RS18700 3764280 .. 3764302 -  -9.9   -4.6902   GGACAAGCCGAAAAA           GACACCCCT GTAAG AGAGGTGTC           TTTTTGAATTATACA  89 34
LT978_RS18695 NONE
LT978_RS18690 NONE
LT978_RS18685 NONE
LT978_RS18680 NONE
LT978_RS18675 NONE
LT978_RS18670 NONE
LT978_RS18665 3758058 .. 3758068 -  -5.4  -2.63913   TACTATTTTACATGA                 TTCC CAA GGAA                 AAAGATTACATTTCA  51 67
LT978_RS18660 NONE
LT978_RS18655 3757177 .. 3757197 - -18.3  -5.38549   CCGAAACAATAAAAA            GCCTCCCGG CGG CCGGGAGGC            TTTTTAAAACAGGAG 100 29
LT978_RS18650 3756252 .. 3756264 -  -6.9  -4.15044   TTCCCCGTCAACAAA                GCAGG CAA CCCGC                ATCCCGAAGATATTG  71 154
LT978_RS18640 3754245 .. 3754268 -   -11  -5.14563   TGCCCGATCAAAAAA          CCTTGCGGGA ACGT TACCGCAAGG           TTTTTATCAATCATT  93 39
LT978_RS18625 3751244 .. 3751262 -  -8.9  -5.00611   CATAAATAAAACAAA             GCAGAGA ACGCA TCTCTGC             TTTTGATAGCTGGAT  91 56
LT978_RS18605 3746114 .. 3746133 -   -15  -5.54907   CGGAGAAAATAAAAA            GCTGCCGC AGCT GCGGCAGC             TAAAACATTATAAGC 100 53
LT978_RS18600 3745387 .. 3745410 -    -4  -2.94912   GCTGGAATTTATACA          TATTTTCTCA CTTG TCAGAAAATA           CATCAACCGGAGGTG  47 43
LT978_RS18595 3744261 .. 3744298 -  -4.3  -5.18561   GAAATATTCAAAAAA   TAAAGACAAGACAGA TTACAAGC TCTATCCTGTCTTTT    GTGCTGATTCGAGCG  79 12
        purT 3743008 .. 3743035 -  -5.6  -5.63517   TGTCCAAACAAAAAA        GGCG-CCTTACCA TTA CGGTAAAAACGCC        TTTTAAGATCATTTT  86 39
        pssA NONE
LT978_RS18580 NONE
LT978_RS18575 3740739 .. 3740768 -  -5.7  -5.40625   ACACCATATAAAAAA       GAGGAG-CAGCTTT TAT AAAGCGGACGCCTC       CTCCTGTGACTCCGC  83 8
LT978_RS18570 3740391 .. 3740417 -  -2.3  -4.40237   TATCATACAGGAAAA        CGGGCGAAAGAT GAAC AT-TTCCGTCCG         TACTCTTTCTTCCAG  59 41
LT978_RS18565 3739332 .. 3739350 - -10.3  -5.56264   TGTAAACACAAAAAA             GACCACC TCATT GGTGGTC             TTTTCTATTAATCAA 100 33
LT978_RS18555 3736603 .. 3736624 -  -9.5  -5.71638   CAATAACCAAAAAAA           GAACCC-TGC GGC GCAAGGGTTC           TTTTTCATTTATACT 100 34
LT978_RS18530 NONE
LT978_RS18525 3728871 .. 3728894 - -13.8  -4.66953   TGAAGACGCCAAAAA          GAGGGCGGCA TAAT CGCCGCCCCC           TCACTATTACTGTCA 100 215
LT978_RS18520 3727558 .. 3727579 -  -9.4  -5.57054   AACAACGCAAAAAAA           CCCCGTCC ATCAAA GGACGAGG            TTTTCGCGGTGCCAC 100 310
LT978_RS18515 3727238 .. 3727276 -    -9  -5.64873   TTGAAGAATAAAAAA   GCAGCTTGTAGAGAAAAC GAT GTTTTTTCTACAAGCTTT   TTTGTTTTGTGCTGT 100 63
LT978_RS18505 NONE
LT978_RS18500 NONE
LT978_RS18495 3723825 .. 3723853 - -12.6  -5.26119   GCTTGAAAAATAAAA        GAACAGTTACCG CTTTT CAGTAACTGTTC        TTAGATACTTATATT 100 39
LT978_RS18490 3723283 .. 3723307 - -18.7  -4.91473   TAAGGGAAAAATAAA          GGCTGTCGAGA TTT TCTCGACAGCC          TGAGCCCCTTAAAGG 100 67
LT978_RS18475 3721918 .. 3721940 - -10.6  -5.69023   AAAACATTAAAAAAA           CACCGTTCAT TTT AAGAACGGTG           CCCCCGGGATTAAAA 100 35
LT978_RS18470 NONE
LT978_RS18465 3719688 .. 3719713 -  -6.8  -4.12532   CTCCTTATAGAGAAA         GAGGCAGAAG CGGATT CGTCTGCCCC          CATGTCAGGATTCAG  71 37
        tatC 3718878 .. 3718899 - -14.4  -3.07685   AAAAGCGCTCAAAAT           CGCCGCGG TGACCG CCGCGGCG            CATGAGGACGATATT  90 64
LT978_RS18450 3717065 .. 3717089 -   -10  -4.79352   TCATTCATAAGAAAA          CAGCAGGCTC CCCGT GAGTCTGCTG          TTTTTTTATATACCG  91 31
LT978_RS18435 3713586 .. 3713608 -    -5  -4.85918   TATTAGAGAAGAAAA           GGAAAAAATA GTG TATTTTTTAC           TGTTTTCAACAATTA  74 141
LT978_RS18430 3712847 .. 3712872 -  -5.3  -4.54306   TGGAAGAAAAAAAGA         CCCCGGGATAT TCTC ATTCTCCGGGG          CTTTGAAACTGTTAA  72 37
LT978_RS18425 3711636 .. 3711661 - -10.5  -5.24129   TTTCTGCAGAAAAAA         CCTTGAAAAGC ATGT GCCCTTCAAGG          TTTTTTGGCTGTGTC 100 41
LT978_RS18420 3710581 .. 3710602 - -11.7  -4.29106   CCTGACAGCAAGAAA           GGAAATAGC GCAG GCTATTTCC            TTTTTTTATTTTCAC  93 37
LT978_RS18410 3707970 .. 3707986 -  -2.2  -3.75707   CAAAGAGGGAAAAGA              GCCG TATTCAGAG CGGC              TGTTTTTCATACAAT  50 85
LT978_RS18405 3705981 .. 3705991 -    -4  -3.85969   TAAAGAAAGAGAGAA                 TTCA CCA TGAA                 ACTACCAGTCAGAAT  57 521
LT978_RS18395 3704719 .. 3704746 -    -7  -5.00765   AAGGAATCATAAAAA        GAACGATGAAAC CGAA GCTCCCTCGTTC         TTTTTTTCATTATGC  83 35
LT978_RS18390 3703840 .. 3703858 -  -6.7  -5.63517   TCTCTAAACAAAAAA             GAGAAGG TTTCC CCTCCTC             TTTTATCTTTCCAGC  90 28
LT978_RS18385 3702041 .. 3702071 -  -6.1  -3.78998   CCAAAGCAAAAGGAA      GC-GCCCCCGTTAC AAAA GAAACGAGGACAGC       AGCTAAGCGGATGAA  61 53
LT978_RS18370 3699882 .. 3699907 - -14.1  -4.03234   TTTCCCGCATAGAAA         TAGTGTGCACC CCGC GGCGCACACTA          TGTTATTTAACCAAT 100 28
LT978_RS18365 NONE
LT978_RS18360 3698325 .. 3698370 - -24.2  -5.40474   ATTTCTGTAAAAAAA GCCGTCAAACGGCGCAGCAG ATGAGA CTGCTGCACCGCTTAACGGC GGTTTTTTCGTTCTT 100 18
LT978_RS18350 NONE
LT978_RS18345 NONE
LT978_RS18340 NONE
LT978_RS18335 3694391 .. 3694413 -  -6.3  -5.25803   AATCGGTACAAAAAA           GGAAGGAAA TGAAC TCTCCCTCC           TTTTTTGTTTTATTC  84 35
LT978_RS18330 NONE
LT978_RS18325 3691602 .. 3691626 - -12.1  -5.60993   TTTTTCACAAAAAAA          TCCCGCTTGCC GTA AGCAAGCGGGG          TGTGTGTTAATTCTT 100 32
LT978_RS18320 3690299 .. 3690315 - -10.1  -5.52986   AGCTCACTAAAAAAA              GCACCCC AAA AGGGTGC              TCATTGCGCAAGCTC 100 26
       opuAA NONE
       opuAB NONE
LT978_RS18305 3686919 .. 3686938 - -10.7  -6.02345   GAAGCATAAAAAAAA            GCAGCCC GTTACA GGGCTGC             TTTTTTTCATTACTT 100 35
LT978_RS18295 NONE
LT978_RS18290 3683633 .. 3683656 -  -6.8  -5.95539   TTTCAAACAAAAAAA          GAAACCACCT GTCA AGATGATTTC           TTTTTTATTTCTTTT 100 13
LT978_RS18285 3681325 .. 3681352 - -15.8  -3.30771   CCAGATTGTTGACAA        CATCCTAAAACG GAAC CGTTTTAGGATG         TTGTATCTTTTCAGC 100 108
LT978_RS18280 3680185 .. 3680212 - -12.8  -5.64006   AGCGAATTAAAAAAA        GCAGTACATGGC GTTT GTCATGTACTGC         TTTTTTGTTTACTCT 100 34
LT978_RS18270 NONE
LT978_RS18265 NONE
LT978_RS18260 3676521 .. 3676538 -  -8.4    -5.626   GATCGTACAAAAAAA             GCAGGG ACACAG CCCTGC              CGGATCATAGCTTAT 100 37
LT978_RS18250 NONE
        nadE 3673516 .. 3673535 - -12.2  -4.18213   AACGATAAACAATAA            CCTCCCTT TCAA AAGGGAGG             TTTTTTCATTCTATT  95 36
LT978_RS18225 3670051 .. 3670069 -  -2.4  -3.58884   GCAATGAAAGAAAAC             CTATCCTT TAT AAGAAGAG             ATGAGTTTTTCTTTC  48 40
LT978_RS18220 3669369 .. 3669392 - -11.8  -5.95449   AAAGAAAACAAAAAA          GCCGT-ACGCT CAC AGCGTCACGGC          TCTTTTTACATCGGC 100 31
         cah 3668269 .. 3668284 -    -9  -5.02074   TCATTCCTGAAAAAA              GCCCAA GTAC TTGGGC               TTTTCGCTGTCGTCA  91 38
LT978_RS18210 3667434 .. 3667448 -  -5.7  -3.66095   AAAGGCGGACGGAAA               TGACG GCAAT CGTCA               ATTTCCGCCTTTTTC  59 23
LT978_RS18205 NONE
        pruA 3664743 .. 3664770 -   -12  -3.57263   ATGTTTATGGTGAAA        TGGACACCCCCC GCGA GGAGGATGCCCA         TTCAGTCCCTCTTAA  90 37
        putP 3663195 .. 3663222 -   -15  -4.11216   CCTGTATCGTGAAAA        GAGGAAAAAGGG CGGT CCCTTCTTCCTC         TCGTTCCTTGCTTTT 100 39
LT978_RS18190 3661815 .. 3661838 -  -9.7  -2.50381   GAAGGTATTAAAACT          GAAACCAGT ACGGCG ACTGGTTTC           TTTTTTATCTCTTTT  73 30
LT978_RS18185 3660426 .. 3660440 -  -4.2  -4.64861   GCGCCGGAAAACAAA               TCGGCA TAT CACCGA               ACCCGAGAGGAAACC  68 220
LT978_RS18160 NONE
LT978_RS18155 NONE
LT978_RS18150 3653059 .. 3653076 -  -9.9  -5.47218   TTTTATGCAAAAAAA             GAGCGAA ATTA TTCGCTC              TTTTCAATCGATTCG 100 16
LT978_RS18145 3652655 .. 3652674 - -13.6  -5.98675   GATAAAAACAAAAAA            GCATCCGG CTTG CCGGATGC             TTAAGAATGATGATG 100 26
LT978_RS18115 3649174 .. 3649196 -  -8.5  -5.49809   TAAACCGCAAAAAAA           GCACTCTAT TTTAC ATAGAGCGC           TTCAAAAAGATTCCT 100 27
       srfAA 3637748 .. 3637781 -  -7.5  -3.25015   GTGAAGTAGGAGGAA     GAATGC-GGATCAAGC AGC GCATGATACAGCATTC     CCTCCTGCATCGGTG  67 99
        comS 3634064 .. 3634076 -  -4.8  -4.07568   CGTTCCCCTTCAAAA                CTGC GCTCG GCAG                GACGCGGGAAATCAA  63 509
LT978_RS18090 NONE
       srfAC NONE
       srfAD 3622424 .. 3622443 - -12.2  -5.24129   TTTTGTTACAAAAAA            CAGACAGC GAAT GCTGTCTG             TCATATCCTATAACA 100 33
LT978_RS18075 3620994 .. 3621010 -  -9.4  -5.04175   GTAAGCATAGAAAAA              GGAGGG TATCC CCCTCC              TTTTTTTGTCAGCCT  91 34
LT978_RS18040 3615513 .. 3615532 -  -2.9  -3.07283   GAAATTCCCTAAAAT            CCTGATA GGCCAT TATCAGA             TTCCTCCTTTTTGTT  44 21
        bsdC NONE
LT978_RS18030 NONE
LT978_RS18025 3613358 .. 3613389 - -11.6  -4.77567   AGGCGTACAATAAAA      GAGAAGCCTGCGGA ATCG TCCGCAGGCTTTTT       TTGTGCGTCTATCGT 100 34
LT978_RS18015 3609756 .. 3609766 -  -6.8  -3.09842   TCAGGTAAAAAAGAT                 GCCT GAC AGGC                 GCAAGGCTGTATTGT  60 112
LT978_RS18005 NONE
LT978_RS18000 3606570 .. 3606583 -  -2.3  -2.70525   TCTCCTCAAATCAAT               CATGC TCAA GCTTG                TCTGAGAGAGGATTA  40 7
LT978_RS17995 3605401 .. 3605424 - -12.5  -4.63527   TCATGATTTTAAAAA          TAACCCGGC GCATCG GCCGGGTTA           TTTCTTCGAAACTGT 100 23
LT978_RS17990 NONE
LT978_RS17985 NONE
LT978_RS17980 NONE
LT978_RS17975 NONE
LT978_RS17970 NONE
LT978_RS17965 NONE
LT978_RS17960 3598504 .. 3598524 - -11.9  -3.57263   AGTTTCACGGTCAAA            GAAAACGGC ACG GCCGTTTCC            TGATACCGCGCCCCT  90 132
LT978_RS17945 NONE
LT978_RS17940 3594051 .. 3594074 - -11.7  -2.96141   GTGAAGATAAAACAG          CCGGCAGCC AGACGG GACTGCCGG           TTTCAAGATGATTCA  82 28
LT978_RS17935 NONE
LT978_RS17930 3592619 .. 3592645 - -13.1  -5.75342   GCCGCGCAAAAAAAA        GACTG-CCGGGA ACAT TCCCGGGCAGTC         TTTTCCTTTGTTCAG 100 53
LT978_RS17915 NONE
LT978_RS17910 NONE
LT978_RS17905 NONE
LT978_RS17900 3586913 .. 3586940 - -16.4  -4.98531   GCGGTAAACCAAAAA        GAACCCGATCAC GTAT GTGACCGGGTTC         TTTTTTTACTTCTCG 100 31
LT978_RS17875 3582899 .. 3582913 -  -8.5  -5.93809   GGCGCATAAAAAAAA               CCCCG GAATT CGGGG               ACTTATTTACCAGCG 100 32
        gabT NONE
        gabD 3578539 .. 3578558 -   -15   -5.7946   CGCTCAATAAAAAAA            GCCCCGCT TAGA AGCGGGGC             TTTCTTTTCGGCTCA 100 41
LT978_RS17855 NONE
         gdh 3576712 .. 3576741 -  -9.4   -4.8622   GCGTGTAAGCAAAAA      GCGATC-C-GGCTC TAAA GAGCCTGCGATCGC       TTTTTTTCTTATCCG  91 34
LT978_RS17830 3573309 .. 3573328 -  -8.6  -6.09888   CCTTAACAAAAAAAA            GACACCTC ATCA AAGGTGTC             TTACCGCTTTCTGTA 100 26
LT978_RS17825 3571682 .. 3571695 -  -2.4  -3.08679   TCGCTTTAGCCAATA               CTTC CATGAT GAAG                ATCCCTCTTTCTGTT  43 44
LT978_RS17820 NONE
LT978_RS17815 3570106 .. 3570126 -   -14   -5.5074   TAACGCAAGAAAAAA            CCCGCGTC CCCCC GACGCGGG            TTCATTTTTATTGAT 100 33
LT978_RS17810 3569646 .. 3569663 -  -9.8  -3.53224   CACGCTTGTCCGAAA             GCCGCC GGTGGA GGCGGC              TTTTTTTACGATGGC  79 31
LT978_RS17800 3568555 .. 3568577 - -12.8  -6.14618   GACAAAACAAAAAAA           GAGAGCCTCA TGC TGAGACTCTC           TCTTTTTTCTATTAT 100 37
LT978_RS17795 NONE
LT978_RS17790 3566382 .. 3566397 -  -3.2  -2.62184   TGGTTTTTCATATCA              TCAGCT CCAT AGCTGC               GGCATTTGCGAGAAT  43 10
LT978_RS17785 NONE
        pxpB NONE
LT978_RS17775 NONE
LT978_RS17770 3563057 .. 3563067 -    -4  -3.28745   CGGTCAATAACCTAA                 TTTC TCA GAAA                 TATGCTGTGCGGCGT  49 3
LT978_RS17765 3562309 .. 3562335 - -13.7  -4.33105   TAAGGAGCACGAAAA         GCGCGCTCCCC ATGAA AAGGAGCGCGC         GGTTTATGAGCTGGC 100 29
LT978_RS17760 3561828 .. 3561844 -  -2.1  -4.61147   GAAGATCATACAAAA              GGCTTTC GCG GATCGCC              GGAATATCAGGAGTG  63 108
LT978_RS17750 NONE
LT978_RS17745 3558421 .. 3558464 -   -30  -2.64422   AGACATTGCACACCA CATAAACAAACGCCCGGAAG ATAC CTTCCGGGCGTTTGTTTATG GAATATCGCAGCCTT 100 21
LT978_RS17740 3556051 .. 3556070 -   -10  -5.65177   ACATGCAGAAAAAAA            CACACCCC ATAT GAGGTGTG             CGCTTTCTGTTTACC 100 36
LT978_RS17735 3554307 .. 3554340 - -16.3  -3.20164   TCACATGGAACGCAA     GAA-AAAAACCCGGCT GGC AGCCGGGTTTTTGTTC     TCTATTATGAACGTA 100 30
LT978_RS17730 NONE
LT978_RS17725 3552788 .. 3552808 - -11.2  -5.71712   TTCCATACAAAAAAA            GATGAGGC GTGCA GCCTCATC            CTTAAATGCGCGGGT 100 27
LT978_RS17720 NONE
LT978_RS17715 3551251 .. 3551271 - -10.4  -5.71712   GTTTACATAAAAAAA           CCGC-CCGG ATGT CCGGCGCGG            TTTTGTCTTATTCTT 100 424
LT978_RS17710 3550329 .. 3550349 - -11.2  -5.52023   ATTATCAATAAAAAA            GCTCCTCT TCTGC AGAGGAGC            TTTTTTCATGCGTTA 100 38
LT978_RS17700 NONE
LT978_RS17695 3547137 .. 3547162 -   -12   -5.0095   AAAAACACAACAAAA         GGCAGCATTT CTTTAC AAATGCTGCC          TTTCTCTGATCTATT 100 36
LT978_RS17690 NONE
LT978_RS17685 NONE
LT978_RS17680 NONE
LT978_RS17675 NONE
LT978_RS17670 3539913 .. 3539931 -  -7.4   -5.9667   AAAAATACAAAAAAA             GAGGCC TGTTAAC GGCCTC             TTTTTCCTTCATTAC 100 37
LT978_RS17665 3537653 .. 3537677 -  -9.3  -5.24129   CTCCTTTACAAAAAA         GACCGC-GGC ATTTCA GCCTGCGGTC          TTTGCCGTTACTTTT 100 33
LT978_RS17660 NONE
LT978_RS17655 3535362 .. 3535384 - -13.6   -5.5454   GTAAATAAATAAAAA           TAAACAGGCA TGC TGCCTGTTTA           TTTTTTATAACCACC 100 47
LT978_RS17645 NONE
LT978_RS17640 NONE
LT978_RS17635 NONE
LT978_RS17630 3532920 .. 3532950 - -11.9  -4.25104   GCGCCCGGACGAAAA       GGAGCGCTCCC TTTCGATTT AGGAGCGCTCC       CATTGATTTTTTCTT  95 234
LT978_RS17615 NONE
LT978_RS17610 NONE
LT978_RS17605 3529562 .. 3529583 -    -8   -5.4387   ACACAAACGAAAAAA           TCCCGCAA TTTTCG TCGCGGGA            TTTTTGGGATTATGG 100 68
LT978_RS17600 3527979 .. 3528015 - -15.3  -4.15788   AAGCCGCTCAACAAA    CAAAGGAGCTGTCGAGA TCT TCTCGATAGCTCTTTTG    TTTGTCCTTGAATGA 100 370
LT978_RS17570 3523106 .. 3523127 -  -8.7  -5.10064   CGGAATATAGAAAAA           CCCCGCTCT CAAG AGAACGAGG            TTTTTCTGCTTATAA  91 35
LT978_RS17550 3521028 .. 3521050 - -12.2  -4.59089   GAACTGATAAACAAA           GAAAACACAT TGA ATGTGTTTTC           GGGTGGTTTTTTATC 100 39
        gsiB 3520524 .. 3520561 -   -23  -4.09511   AAGATTTTCCCAAAA   TCAAAAGCGATCCGGC TGATGT GCCGGATCGCTTTTGA    TCTGCAGGTTGTCTG 100 56
LT978_RS17540 NONE
LT978_RS17535 3519744 .. 3519757 -  -3.7  -5.83211   GACGAAAATAAAAAA               GCCTC TAAA GGGGC                TTTTTTTATGTGCGC  89 31
LT978_RS17520 NONE
LT978_RS17515 NONE
        dctP 3514033 .. 3514059 - -16.7  -5.40072   GGCGGCCGAAAAAAA         GAACGGCATGC CGGAT GCATGCCGTTC         CTTTCCTTTTATACC 100 34
LT978_RS17505 3512763 .. 3512784 -    -8  -5.13354   TTCACAAAAAATAAA           CAGTGCCC GTACAT AGGCACTG            TCTGCATTATAACAT  89 74
LT978_RS17500 NONE
LT978_RS17495 3511058 .. 3511069 -  -2.2  -3.07962   CTTTATACCCGAACA                TCGC GTTT GCAA                 AAGCTCCACCAAGCG  43 1
LT978_RS17490 3510590 .. 3510613 -  -9.6  -5.60993   GGCTGTACAAAAAAA          CACGCTATCC CATA GAATAGCGCG           TTCAGACTGCTTCCG 100 27
LT978_RS17485 3509332 .. 3509348 -    -8  -5.04597   AGCCATACATAAAAA              GAGCCT TTTTC AGGCTC              TTTTTTTTATTGCTC  89 32
LT978_RS17470 3507844 .. 3507860 -  -2.2  -4.66535   AACGGCGAAAAGAAA              GCGC ATCTTCACA GCGC              AAACGCGAAAACGCC  67 74
LT978_RS17460 3506324 .. 3506347 - -13.2  -4.13767   TCTGTTACGGGAAAA          GACACTGCCC CTTC AGGCAGTGTC           CGTCTTCATTAAAAT 100 34
LT978_RS17455 3504636 .. 3504658 -  -8.5  -4.77438   ATTTACCACTAAAAA           CTGCCCTTT CATCC AAAGGACAG           GATCATACGTATACA  87 276
        cshA 3503061 .. 3503083 - -12.7  -5.50499   GCATATCGAAAAAAA           GCGGACCCC GTAAA AGGGTCCGC           TTCCTGTGTTTTAGT 100 36
LT978_RS17445 NONE
LT978_RS17440 3501033 .. 3501053 -    -9  -5.52384   CGTGCAGCAAAAAAA           GCGG-CGGT ATTA ACCGTCCGC            TTTTTCATATGAATA 100 14
        acpS NONE
LT978_RS17425 3498785 .. 3498805 -  -8.9  -5.29385   AATGGAATCAAAAAA            GAGACCGAC AGC GGCGGCCTC            TTTTTTGACATTATT 100 36
         alr 3497465 .. 3497478 -  -3.9  -2.91912   TCATCCATCCAGACA               TAATG ATAC CATTA                TTCAAACGTCAAGCA  47 77
        endB NONE
        ndoA 3496744 .. 3496762 -  -8.9  -6.09196   TCGAAAACAAAAAAA             GTTGCTC TATAT GAGCAAC             CAAAATATGACTAAA 100 36
LT978_RS17405 NONE
        rsbS NONE
LT978_RS17395 3495068 .. 3495080 -  -5.5  -3.06133   TAACCTCCTACCGAA                GCCAT TTT ACGGC                TTGAATCTCTGTTCC  54 5
LT978_RS17390 NONE
        rsbV NONE
        rsbW NONE
        sigB NONE
LT978_RS17370 3491807 .. 3491828 -  -6.6  -5.80817   CGGAACATAAAAAAA           GCAGCCTT ACGATA AAAGCTGC            CCGAGAATATAGGTC 100 10
LT978_RS17365 3489560 .. 3489577 -  -9.9  -5.71712   TTCTACAGAAAAAAA             CACTGCT CGTA AGCAGTG              CTTTTATTTTACCAT 100 29
LT978_RS17355 3488849 .. 3488865 -  -6.6  -3.00946   TTTTTTGAGAAAGCA              TCGTTG TCTCT CAACGA              CTTTTATAATTTAAC  58 69
LT978_RS17350 NONE
LT978_RS17345 3488617 .. 3488629 -  -3.3  -2.82623   TCTGGCGGAGAAGGA                GGGAT TTG AACCC                TCGCGCCGCTTACGC  44 0
LT978_RS17340 NONE
LT978_RS17335 3488412 .. 3488423 -    -3  -4.69027   AAAGTGATTCAAAAA                TTTC AAAT GAAA                 TGGCTGGGCTAGCTG  62 26
LT978_RS17330 NONE
LT978_RS17325 3488195 .. 3488211 -  -5.1  -2.64765   TAAGCATATAAGCTA              GTGATGA TGA TCAGCAC              TTTGAAAAGAAAGTG  49 39
LT978_RS17320 3487761 .. 3487788 -  -8.6  -5.50499   TTATAGCCAAAAAAA        GACTTAACCTTT TAAA AAAGATTAAGCC         TTTTCAGTACCTTTA 100 310
LT978_RS17310 3486752 .. 3486780 -  -5.4  -5.48303   ATAAGCGCAAAAAAA        TACCAAGGAT CTCTCTATT ACCCTTGGTA        TCATTGGGATGCGGC  83 323
LT978_RS17300 3485242 .. 3485261 - -12.2   -5.4182   AATTAGAAAGAAAAA            GAGCAGGA GTAA TCCTGCTC             TTTCATTCAAAACTT 100 379
LT978_RS17290 3482813 .. 3482841 - -11.8  -5.58522   TACAGAAAATAAAAA        GCCAGCTCTCCT TCGGG AGAAGAACTGGC        ATAACAAAGCTTCTT 100 275
LT978_RS17275 3480126 .. 3480151 -  -8.4  -5.72622   TCTATAAACAAAAAA         TACCAAAGGT GTCAAA ACCCTTGGTA          TCATAGGGATCGGCC 100 102
LT978_RS17270 3479798 .. 3479825 - -11.4  -5.62288   TCAATAAAACAAAAA        GGGACTGGA-TCA TAT TGAATCCAGCCCC        GAATTGATATTGATT 100 63
LT978_RS17260 3478413 .. 3478434 - -13.1  -3.27177   CTTAAAAGGAAGATA           CCATTAGCG ATGA CGCTAATGG            CGCCCTTTGTTTCTA 100 50
        cspC 3477657 .. 3477678 -    -8  -5.84432   GAGAACATAAAAAAA           CAGGCCCT ATATAA AGAGCCTG            TTTGTATAAACGATT 100 46
LT978_RS17245 3476443 .. 3476474 -  -3.1  -5.28414   TAATAAATATAAAAA      TTCGTCAACCT TAAAGATGAT AGGTTGATGAA       TTTTTTTATCGGCTC  75 31
LT978_RS17240 3475722 .. 3475732 -  -5.4  -3.02511   GTTATTTGTTTAACA                 CCAT GCA ATGG                 GAAAAAACGTCGAAA  53 123
LT978_RS17235 NONE
LT978_RS17230 3474607 .. 3474618 -  -2.2  -3.41229   ACATCTTTATCAGAA                GGAA TTTT CTCC                 AAGATATCTTCTACG  46 207
LT978_RS17220 3473375 .. 3473397 -  -2.7  -5.27335   CCTTTCAAAGAAAAA           GGGCATC TTTGTATTC GATACCC           TTTCACATTCATTAG  73 37
LT978_RS17215 3472091 .. 3472101 -  -8.2  -3.33815   ACTTGCTTTAAGTAA                 CGGC GCA GCCG                 CAAACAAAAAAATAC  70 497
LT978_RS17210 3470783 .. 3470795 -  -3.3  -4.03234   CTGGGTTTATATAAA                CAGCC CAT GGCTT                AGCGGAACTCGGTAT  58 462
LT978_RS17190 3468288 .. 3468313 - -10.6  -4.94222   AACAATTTATAAAAA         GCCTTAACTT TGGGTG AAGTTAAGGC          TTCCGTTATTTCCCC  93 67
LT978_RS17180 3466233 .. 3466251 - -10.3  -5.38951   AATTCATACAAAAAA             GCCTGAC GAGTT GTCAGGC             TTTTAATTGGCTGTT 100 20
LT978_RS17175 NONE
LT978_RS17170 3464352 .. 3464365 -  -2.4  -4.81843   AATAATTAAAATAAA               GCAA AAATAA TTGC                CGAAACAGTGATGAC  64 2
LT978_RS17165 3463073 .. 3463119 - -15.4  -6.28401   TAAAAAACAAAAAAA CAAAGAAAGACAGCACTGACTG ATT CAGTAATTGCTGTTTTTCTTTG TTTCATGTGTTTTAG 100 37
LT978_RS17155 3460671 .. 3460694 -  -8.9  -5.71712   GTTGACATAAAAAAA          GCCAAAGGC GGTTAA ACCTTTGGC           ATGATTGATACGCCG 100 152
LT978_RS17150 3459166 .. 3459189 -  -8.3  -5.42862   ACACGCGCAAAAAAA          CCATACAAT ATAGTA ATTGTATGG           CGGACAATATTAGAT 100 35
LT978_RS17145 3457700 .. 3457725 -  -6.2  -5.53436   AGAGAACATAAAAAA         TACCAAAGGC CGTTAC ACCCTTGGTA          TCATTGAGATGCAGC  89 108
LT978_RS17140 3457132 .. 3457149 -  -4.9  -3.61398   CCTTCGGTGTAATAA             GGCAA-TC GTT GACTTGCC             TGTTCAATATCAACC  57 104
LT978_RS17135 3456609 .. 3456631 - -16.4   -5.1286   TAAAAATGATAAAAA           GGATGCTGCA CGC TGCAGCATCC           TTCTGTACCAACTTT 100 73
LT978_RS17130 3455791 .. 3455822 -  -3.9  -6.47325   AAAAAACAAAAAAAA     GACAAGAG---CGGCA AGC TGCCGAAACTCTTGTC     TCTCCTGCCATGATA 100 243
LT978_RS17125 3454262 .. 3454283 -  -8.7  -5.31855   TAGCAACAATAAAAA           CACACCTGA ATGT TCTGGTGTG            TTTTTTATTTTGTTT 100 56
LT978_RS17115 NONE
LT978_RS17110 3451679 .. 3451705 -  -6.7  -5.48063   ATTCAACACAAAAAA         GAGCAGTAA ACACGTAAG TTACTGCTC         TCCACAGTCTATCCG  89 34
LT978_RS17090 3448967 .. 3448986 -    -5  -2.89822   ACAATAATCACCATA            TCATAAGG GTTC CCTTATGT             AAAGTTAAACAAATG  51 148
LT978_RS17085 3448703 .. 3448722 -  -8.6  -5.64274   TCAGGCACAAAAAAA            CACCGACA CAAT TATCGGTG             TTACGCTTAAATAAC 100 65
LT978_RS17080 3447507 .. 3447525 -  -3.2  -2.66216   TTTTATCACGATAAC             CATTTTAT GTT ATCAAATG             AAATAATATGAAGTC  43 62
LT978_RS17075 3447010 .. 3447034 - -12.9  -5.26875   GCCGGAATTAAAAAA          CACCAAGGGTC TGT GACACTTGGTG          TTTTTGGAACGCGGG 100 60
LT978_RS17070 3445925 .. 3445946 - -10.3  -5.25803   AATTCTCATAAAAAA           CATACCAAT ATCT ATTGGTATG            TTTTTTTCAGCCCAG 100 49
LT978_RS17060 3444240 .. 3444259 -    -5  -6.14618   TAGAAAATAAAAAAA            CCAAGG CTCGTTTC CCTTGG             TACATTTCATGCGGC 100 64
LT978_RS17055 3442751 .. 3442780 - -13.7  -3.72576   TTGGCTGTCATGAAA       GAAAAAAGGCGCC GAAC GGCGCCTTTTTTT        ATCTTTTATTTCGTA 100 31
LT978_RS17045 3440591 .. 3440612 -  -8.1  -5.73339   ATAATCAGAAAAAAA           CATACC-GCA TGC TGCCGGTATG           TTTTTAACATGCTTG 100 41
LT978_RS17030 3437886 .. 3437906 - -14.1  -3.73904   AAATAGAGCGAAGAA            GGCAGAACA ATT TGTTCTGCC            TTTTCATTATTTTCT 100 84
LT978_RS17000 NONE
LT978_RS16995 3433079 .. 3433098 -  -7.2  -6.02914   TTCACATAAAAAAAA            CGTACATA GGGG CATGTACG             TTTGGGCAGTTTTTC 100 42
LT978_RS16990 3430835 .. 3430853 -  -9.6  -5.74122   CAGCACATAAAAAAA             GCAGATCA TAA CGATCTGC             TTTTTCATTTTATTC 100 35
LT978_RS16965 3425096 .. 3425118 - -17.8  -5.28826   AAAGGGCATAAAAAA           CCAAGGGCTG TAA CAGCCCTTGG           TTCCGGGTCACGCGG 100 50
LT978_RS16960 3423774 .. 3423793 - -10.8  -5.52384   CGGGCATCAAAAAAA            GGAGTGAA TCAT TTCACTCC             TTTTTTGCTTTCTCC 100 19
LT978_RS16950 3421542 .. 3421561 -   -15  -3.85165   TATTTTAAACTGAAA            CGGGAGGC GGCC GCCTCCCG             TTTTTTCTGTTCTTC 100 39
LT978_RS16935 3419062 .. 3419102 -    -2    -3.551   CCCTAACGGAGAGAA GCGCAGTCACTT-TCCTCC ATTAAG GGCGGAGAAGTG-CTGC-C GGTACATCATGTTCA  48 144
LT978_RS16930 3418099 .. 3418119 -  -9.8  -5.04325   GGGAAATCAGAAAAA            GCCATTCA TTTGC TGAATGGC            TTTTTTTCATTTTCT  93 39
LT978_RS16925 NONE
LT978_RS16920 3416493 .. 3416549 - -11.9  -3.53094   CTCAAATCAAGAACA GT-TAATACGAAAAAACCGC-GGGCAG GAAAA CTGCACAGCGGTTTTTTCGTCTCAGAC GGGACGGAGCGCGCA  90 20
LT978_RS16910 3414556 .. 3414576 -  -7.6  -5.42862   ACATCGGCAAAAAAA            GACAAGGC TTTTC ACCTTGTC            TATCGTGATGATGCG 100 25
LT978_RS16905 3413200 .. 3413229 - -11.6  -4.92783   AAGCCATTATAAAAA       GCCTGTTTCC-CT TTGGC AGAGGAAACAGGC       TTTTTCCATGTATTA 100 38
LT978_RS16895 3412388 .. 3412402 -  -7.1  -3.77464   ACACCAGTCAGTAAA               CTGCC GTTCA GGCAG               CCGCGGAGGTTTAAT  70 50
LT978_RS16890 3410680 .. 3410690 -  -2.6  -3.25072   TGCAGTATAATTTAA                 TTAT CAG ATAA                 TAGGGGGAACTCATC  46 267
LT978_RS16880 3409910 .. 3409929 -   -10  -5.07567   TGAGACCGCAAAAAA            GCCAAAGG AGTT CCTTCGGC             TTTGGCGGTCTTTTT  93 39
LT978_RS16870 3407651 .. 3407671 -  -6.9   -5.7946   GCGGCAACAAAAAAA            GAGTGAG TTTTTCT CTCACTC            TTCGGCGCTTTTATG 100 36
LT978_RS16865 NONE
LT978_RS16860 3405640 .. 3405664 - -12.2  -5.63517   TTTTTAAATAAAAAA          CAAAGGACCC TAAGC GGGCCCTTTG          TTTTTTTATGCTGTT 100 31
LT978_RS16825 3399808 .. 3399828 -    -9  -4.26589   ATTACATATTGAAAA            CCCCCAAC TGCTG ATTGGGGG            TTTTTGTTTTATTCT  83 34
LT978_RS16820 3397952 .. 3397973 -  -8.7  -5.50774   TATAATAAATAAAAA           GCAGGATTC CCAG GAACCCCGC            GTCTATTCAGATTAC 100 37
LT978_RS16815 NONE
LT978_RS16810 3397377 .. 3397398 -  -6.7   -3.3382   TGGATCACAGACTAA           GTTCACTGCA TCC TGCAGT-AAC           GTCTGTGTGATCTGC  61 149
LT978_RS16805 3395647 .. 3395657 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
LT978_RS16800 3392660 .. 3392677 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAATA  67 55
         rrf NONE
LT978_RS16790 NONE
LT978_RS16785 3392276 .. 3392294 -  -8.9  -4.84146   ACGATATAAAAGAAA             GCTTGGT TAGAT ACCAAGC             TGCCAGCATTAAAAG  88 89
        thiL NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD 3388527 .. 3388550 -  -8.2  -5.71638   TAATAAGTAAAAAAA          GCCTCACATT TTAC AACGTGAGAC           GATCAAAGGATGTTA 100 12
        moaC NONE
LT978_RS16745 NONE
LT978_RS16740 NONE
        tatC 3384100 .. 3384135 -   -15  -5.16681   CCAAAAATAATAAAA    GAAAAGCCATTTCTCA TCAT TGAGAAATGGCTTTTT     TTATGCTGATACGTC 100 26
       groES NONE
        groL 3380945 .. 3380962 - -11.3  -5.77734   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA 100 38
LT978_RS16690 NONE
LT978_RS16685 NONE
LT978_RS16680 3376294 .. 3376310 -  -2.2  -2.87132   TTGCCTCCTGATATA              TCCAGT TGTTC ACTGGT              AAAATTTAATTAATG  41 47
LT978_RS16675 3375691 .. 3375710 -  -2.2  -4.18488   ATCTACTTTAAGAAA            CTGAT-TGA TTT TCATACCAG            CACCGCCTGCCTTTC  54 17
LT978_RS16670 NONE
LT978_RS16665 3375212 .. 3375225 -  -3.1   -4.2679   TAATCTTTACCAAAA               GACCT TTTG AAGTC                CACTCTGCCAAGTGG  60 48
LT978_RS16660 NONE
LT978_RS16655 3374017 .. 3374033 -  -3.7  -2.63382   TTTTATATTGAGAAT              TTGACAT GTA ATGTCTA              TCAATCTCGTTAGAG  45 35
LT978_RS16650 NONE
LT978_RS16645 NONE
LT978_RS16640 NONE
LT978_RS16635 3371398 .. 3371408 -  -3.2  -2.66216   TGGCAGCAGGATAAC                 CGCT TTA AGCA                 CTGTGCATCAGCTCC  43 19
LT978_RS16630 NONE
LT978_RS16625 NONE
LT978_RS16620 3370040 .. 3370063 -  -2.2  -2.85999   CCAGTTCATATCAGA          GCATCGGGGC TTCG GCTTCGGTGC           TTTTTTACGTTTTAC  41 37
LT978_RS16615 NONE
LT978_RS16610 NONE
LT978_RS16600 NONE
LT978_RS16595 NONE
LT978_RS16590 NONE
LT978_RS16585 NONE
LT978_RS16580 NONE
LT978_RS16575 NONE
LT978_RS16570 NONE
LT978_RS16565 NONE
LT978_RS16560 NONE
LT978_RS16555 NONE
LT978_RS16550 3364792 .. 3364838 - -16.7  -5.63517   CGCTCAAATAAAAAA CGGACACCAATCAGAGCACAG TGATT CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 49
LT978_RS16545 3364100 .. 3364129 -  -2.9   -5.4505   TTCTCCAATAAAAAA       GAGCCTATTCACGC TAA ACA-GAATAGGCTG       TGATCTGCTCTATTT  76 4
LT978_RS16540 3363833 .. 3363854 - -10.2  -3.16191   CTATACTTGGAGCAA           GGGAGAAG CGCTAC CTTCTCCC            TCGGCTCAAAATCAT  76 37
LT978_RS16535 3363337 .. 3363354 -    -7  -5.27779   CGTAAGACGAAAAAA             CACCCT TTTGAC AGGGTG              CTCATTTCCGCCTAT  91 27
LT978_RS16530 3363011 .. 3363024 -  -8.1  -5.84432   GAGAACATAAAAAAA               CACCC CGAA GGGTG                TTCATCACATTAGCT 100 35
        terS NONE
LT978_RS16520 NONE
LT978_RS16515 NONE
LT978_RS16510 NONE
LT978_RS16505 NONE
LT978_RS16500 NONE
LT978_RS16495 NONE
LT978_RS16490 NONE
LT978_RS16485 NONE
LT978_RS16480 NONE
LT978_RS16475 NONE
LT978_RS16470 NONE
LT978_RS16465 NONE
LT978_RS16460 NONE
LT978_RS16455 NONE
LT978_RS16450 3353578 .. 3353598 - -12.5   -5.0538   TTGTATGTTAAAAAA            GAGCCCGGG AAG CCCGGACCC            TATGATTCCTTTTCT 100 25
LT978_RS16445 NONE
LT978_RS16440 NONE
LT978_RS16435 NONE
LT978_RS16430 3346817 .. 3346828 -  -4.4  -3.09787   TGAAAGTATATAAAT                GTCA GCCA TGAC                 CGGACCTCCTTACAA  50 35
LT978_RS16425 NONE
LT978_RS16420 NONE
LT978_RS16415 NONE
LT978_RS16410 3342905 .. 3342924 -  -4.3  -5.48213   GAGGCAAAATAAAAA            CACCTAT TCAGTT ACAGGTG             CTGATTCACTATTAT  81 9
LT978_RS16405 3342442 .. 3342462 - -10.4  -5.56264   TTGAAATATAAAAAA            GCAGCCGG GTTAA CCAGCTGC            CTGATCGTCTTTTTC 100 14
LT978_RS16400 3341403 .. 3341423 -    -9  -4.09509   ATTAACTCATACAAA            GCCCCCTT AGAAA AAGGAGGC            AGCTTTGGATTACTT  79 35
LT978_RS16395 NONE
LT978_RS16390 3339199 .. 3339216 - -11.3  -5.77734   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA 100 467
LT978_RS16360 NONE
LT978_RS16355 NONE
LT978_RS16350 3334548 .. 3334564 -  -2.2  -2.87132   TTGCCTCCTGATATA              TCCAGT TGTTC ACTGGT              AAAATTTAATTAATG  41 47
LT978_RS16345 3333945 .. 3333964 -  -2.2  -4.18488   ATCTACTTTAAGAAA            CTGAT-TGA TTT TCATACCAG            CACCGCCTGCCTTTC  54 17
LT978_RS16340 NONE
LT978_RS16335 3333466 .. 3333479 -  -3.1   -4.2679   TAATCTTTACCAAAA               GACCT TTTG AAGTC                CACTCTGCCAAGTGG  60 48
LT978_RS16330 NONE
LT978_RS16325 3332271 .. 3332287 -  -3.7  -2.63382   TTTTATATTGAGAAT              TTGACAT GTA ATGTCTA              TCAATCTCGTTAGAG  45 35
LT978_RS16320 NONE
LT978_RS16315 NONE
LT978_RS16310 NONE
LT978_RS16305 3329652 .. 3329662 -  -3.2  -2.66216   TGGCAGCAGGATAAC                 CGCT TTA AGCA                 CTGTGCATCAGCTCC  43 19
LT978_RS16300 NONE
LT978_RS16295 NONE
LT978_RS16290 3328294 .. 3328317 -  -2.2  -2.85999   CCAGTTCATATCAGA          GCATCGGGGC TTCG GCTTCGGTGC           TTTTTTACGTTTTAC  41 37
LT978_RS16285 NONE
LT978_RS16280 NONE
LT978_RS16275 NONE
LT978_RS16270 NONE
LT978_RS16265 NONE
LT978_RS16260 NONE
LT978_RS16255 NONE
LT978_RS16250 NONE
LT978_RS16245 NONE
LT978_RS16240 NONE
LT978_RS16235 NONE
LT978_RS16230 NONE
LT978_RS16225 NONE
LT978_RS16220 NONE
LT978_RS16215 3323041 .. 3323087 - -16.7  -5.63517   CGCTCAAATAAAAAA CGGACACCAATCAGAGCACAG TGATT CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 49
LT978_RS16210 3322349 .. 3322378 -  -2.9   -5.4505   TTCTCCAATAAAAAA       GAGCCTATTCACGC TAA ACA-GAATAGGCTG       TGATCTGCTCTATTT  76 4
LT978_RS16205 3322082 .. 3322103 - -10.2  -3.16191   CTATACTTGGAGCAA           GGGAGAAG CGCTAC CTTCTCCC            TCGGCTCAAAATCAT  76 37
LT978_RS16200 3321586 .. 3321603 -    -7  -5.27779   CGTAAGACGAAAAAA             CACCCT TTTGAC AGGGTG              CTCATTTCCGCCTAT  91 27
LT978_RS16195 3321260 .. 3321273 -  -8.1  -5.84432   GAGAACATAAAAAAA               CACCC CGAA GGGTG                TTCATCACATTAGCT 100 35
        terS NONE
LT978_RS16185 NONE
LT978_RS16180 NONE
LT978_RS16175 NONE
LT978_RS16170 NONE
LT978_RS16165 NONE
LT978_RS16160 NONE
LT978_RS16155 NONE
LT978_RS16150 NONE
LT978_RS16145 NONE
LT978_RS16140 NONE
LT978_RS16135 NONE
LT978_RS16130 NONE
LT978_RS16125 NONE
LT978_RS16120 NONE
LT978_RS16115 3311827 .. 3311847 - -12.5   -5.0538   TTGTATGTTAAAAAA            GAGCCCGGG AAG CCCGGACCC            TATGATTCCTTTTCT 100 25
LT978_RS16110 NONE
LT978_RS16105 NONE
LT978_RS16100 NONE
LT978_RS16095 3305066 .. 3305077 -  -4.4  -3.09787   TGAAAGTATATAAAT                GTCA GCCA TGAC                 CGGACCTCCTTACAA  50 35
LT978_RS16090 NONE
LT978_RS16085 NONE
LT978_RS16080 NONE
LT978_RS16075 3301154 .. 3301173 -  -4.3  -5.48213   GAGGCAAAATAAAAA            CACCTAT TCAGTT ACAGGTG             CTGATTCACTATTAT  81 9
LT978_RS16070 3300691 .. 3300711 - -10.4  -5.56264   TTGAAATATAAAAAA            GCAGCCGG GTTAA CCAGCTGC            CTGATCGTCTTTTTC 100 14
LT978_RS16065 3299652 .. 3299672 -    -9  -4.09509   ATTAACTCATACAAA            GCCCCCTT AGAAA AAGGAGGC            AGCTTTGGATTACTT  79 35
LT978_RS16060 NONE
LT978_RS16055 3297390 .. 3297422 - -16.5  -5.75822   TAGAAATTAAAAAAA      GCCTCTCACAAATTC ATT GAACTTGTGAGAGAC      TTCGATATGGTGTTA 100 510
LT978_RS16045 3294816 .. 3294863 -  -8.7  -2.66042   AATATGCATTATAAC GCTTTTCCCAAAAGTAAATCA AAACAG CGATTTACTTTTGGGAAGAAT TAATTATTCAAATTT  67 29
LT978_RS16040 3293930 .. 3293951 -  -4.5  -4.39426   TATATCTTTAGAAAA           CAAGACTAT TATA ATACTCTTG            AACTGCATTTAAAAT  66 284
LT978_RS16035 3292715 .. 3292751 -  -5.3  -5.19879   TTTTAAAGATAAAAA    GGTATCTTTATCAGT ACAGTAA ATTGATTAAGATACC    TTTATTGAAAAAATT  81 114
        gutB 3288872 .. 3288893 -  -6.6  -3.29325   TTTTGATAAGCAAGA           GGGAGAAT GCAAAG ATCCTCCC            CGTTCACTCAGCGAT  61 33
LT978_RS16020 NONE
LT978_RS16015 3286338 .. 3286380 - -13.7  -4.48299   TCAGACCTAAATAAA GAGGATGCTTCCCG-AAGTC CGAT GACTTTCAAGAAACATCCTC CATACTTTACAGTGA 100 32
LT978_RS16010 NONE
LT978_RS16005 NONE
LT978_RS16000 NONE
LT978_RS15995 NONE
LT978_RS15990 3282135 .. 3282153 -  -8.1  -5.67967   ATCATGACAAAAAAA             GAGGCCC AAACA AGGCCTC             TTTTTCGTATATCGT 100 40
LT978_RS15965 3276571 .. 3276590 -  -4.3  -4.98255   CGTCAATCAGAAAAA            GCAAGAA TCAGAG TCCTTGC             TTTTTAAGATGGTCT  73 44
LT978_RS15960 3275471 .. 3275490 -   -10  -5.14563   TTGTTCATTAAAAAA            CACCCAGC GGGC GCTGAGTG             TTTTTTTCATGGTTG  93 32
LT978_RS15935 NONE
LT978_RS15930 NONE
LT978_RS15925 NONE
        guaA 3265313 .. 3265358 - -14.3  -4.58685   AAACGGTTTCAAAAA GATGAAAAAAAACGCCTCTTT TTTA AAAGAGACGTTTTTTATCTTC ATTTATTCCCACTCA 100 28
LT978_RS15915 NONE
LT978_RS15910 3263272 .. 3263295 - -14.6  -3.45571   TAATTGACCAAAAAT          GGAAGACGGC AAGG GCCGCCTTCC           CGGCATCATTTTCCG 100 31
LT978_RS15905 3261597 .. 3261614 -  -8.4  -5.98675   GACAAAAACAAAAAA             CCGGCT TTCCTC AGCCGG              TTTTTCCGTTATTTC 100 34
LT978_RS15900 3260622 .. 3260634 -    -2  -3.41445   AAAAATTTGTAAACA                TTGT GAAAG ACAA                ATTTCGACTTATAAA  46 34
LT978_RS15895 3260297 .. 3260316 -  -5.6  -6.34616   TCAAAAGAAAAAAAA            GCCCGCCC CGCA AGGCAGAC             TTTCAAGCTCTTATC 100 28
LT978_RS15890 NONE
LT978_RS15885 3259192 .. 3259235 - -12.5  -5.93809   TTTTCAGAAAAAAAA GCCCGGCTTATATTGCAAC TATGAG GAAGCAATACAAACCGGGC ATGGCGCGCGTATCG 100 253
        purE NONE
        purK NONE
        purB 3256214 .. 3256225 -  -7.2  -3.62224   ACAGCGGCTGAAGAA                GCCG CCTC CGGC                 TGGCTTCTTCTATAA  67 35
LT978_RS15865 NONE
        purS NONE
        purQ NONE
        purL NONE
        purF 3250847 .. 3250868 -  -5.7  -4.40605   AGGCAGAAAGAGAAA           GGCAGCCTG AATT CCCGCTGCC            TTTATGTCATTTTCA  69 45
        purM 3249766 .. 3249776 -  -2.4  -3.44848   CTTTTTCATGAAAGA                 GCCG CAC CGCC                 GAAAGAAATGCCTTC  46 5
        purN NONE
        purH NONE
        purD 3246322 .. 3246343 - -12.3  -4.79352   TCATTCAGAAGAAAA           CCCGCATCT TTTA AGACGCGGG            GGTTTCCTCTTTATC 100 36
LT978_RS15815 NONE
LT978_RS15810 NONE
LT978_RS15805 3242730 .. 3242754 - -13.6  -5.64274   GCACGCATAAAAAAA         CCGC-CTGCCG TCAT CGGCAGAGCGG          TTTTTTACGTAGCTG 100 30
LT978_RS15795 NONE
        pcrA NONE
        ligA NONE
LT978_RS15780 3234709 .. 3234736 - -10.7  -5.22312   ATTCACACTAAAAAA        CCCTTGCTCAT ACAGAA ATGAACAAGGG         CATCTTGGTTAATCG 100 34
LT978_RS15775 3233479 .. 3233501 - -11.3    -5.626   TACGTTATAAAAAAA          CGCCGGGCTG GATT CAGCC-GGCG           TTTTTTTATATTTAT 100 37
        gatC 3230452 .. 3230462 -  -5.4  -2.99704   TTGTGATCAAATAAT                 GACA TAC TGTC                 TCCCTCCTTTAATCC  53 34
        gatA NONE
        gatB 3227498 .. 3227519 - -12.3    -5.626   CAGCTTATAAAAAAA           GAGACCGGC GCTT ACCGGTCTC            CGTGTCAGCAGCGCC 100 61
LT978_RS15740 3223335 .. 3223364 -   -15  -5.55769   TGCCAGAAGAAAAAA       GGCCCCGGCTCC GTTTAA GGAGCCAAGGCC        CGCTGTCTTACTCTT 100 33
LT978_RS15735 3222263 .. 3222301 - -16.4  -2.79004   TCACGCTGAAAAGAT   GACAAAATCCTAAAAC GAATACT GTTTTAGGATTTTGTC   CGCGTATTAGTCATC 100 32
        rlmD 3220707 .. 3220717 -  -2.6  -4.09963   TGTTAATAACAAGAA                 TATA GAT TATA                 AAAACAAAATTTGTT  55 92
LT978_RS15725 NONE
LT978_RS15720 3215593 .. 3215619 -  -6.7  -5.03747   AAATTTTTTAAAAAA         GAAGTAACC ATTAGATTA GGTTACTTC         TCACAAAATAGAGTA  83 92
LT978_RS15715 3214439 .. 3214476 -    -3  -4.19953   TATTTAATCTTAAAA   TCCATAAATTTCTATGA TTTCT TCATA-AAACATATGGA   AAATAGGTATTGGTT  55 90
LT978_RS15685 3209258 .. 3209282 - -10.7  -5.54338   TAAGCAAAATAAAAA          GGCCGGAAC TTATGCC GTCCCGGCC          TTTTTGTCTTTATTC 100 35
      ant(6) 3207722 .. 3207738 -  -8.7  -5.92399   TAAGAAAATAAAAAA              GCCCGTT AAA AACGGAC              TCAATGCAGCTCATC 100 61
LT978_RS15670 NONE
LT978_RS15665 NONE
       cotJC 3206538 .. 3206559 -  -6.5  -5.75822   CAGAAAGGAAAAAAA           CAGCCGTCA TGTT TGAGGGCCG            TTTAAAAAATTTTCT 100 27
LT978_RS15655 NONE
LT978_RS15650 3205598 .. 3205613 - -10.4  -5.80248   CAATACACAAAAAAA              CGCAGC CGAG GCTGCG               TTTTTTTCACTTCTG 100 42
LT978_RS15645 3204798 .. 3204822 -  -9.4  -4.78157   ACGAAAAATAATAAA         GAGCATTTGCC CCAG GGCAA-TGCTC          TTTTTATTTTTTCTC  90 29
LT978_RS15630 3202962 .. 3202985 - -10.2  -5.60993   CCGCTGACAAAAAAA          GCGCCCCGCC TCTG GACGGAGCAC           CTTTTTTCTATGCTT 100 33
LT978_RS15625 3202458 .. 3202484 -  -2.2  -3.53012   CGGCTCTCCCGGAAA         GGAACAGTTGAA TGC TTCATATGTACC         GCCTCCTGTCATTGG  46 48
LT978_RS15620 NONE
LT978_RS15615 3201405 .. 3201427 - -14.8   -5.1764   GACAGAACATAAAAA           GGCGCCCTTC TTA GCAGGGCGCC           TTTTTCGCGCGATTA 100 38
LT978_RS15605 3199587 .. 3199608 -  -5.9  -4.47873   ACAAGACTGACAAAA           GTCCAGA CGCCATGT TCTGGAC            TTTCTGTATTTAATA  72 35
LT978_RS15595 3195129 .. 3195148 -   -10  -5.47218   GGTGATGTAAAAAAA            GGACCGGA GTCA TCCAGTCC             TTTTCATCACATCGC 100 41
LT978_RS15590 3192775 .. 3192801 - -17.4  -6.06529   GATACACAAAAAAAA         GAGCCTCACGGA AAT TCCGTAAGGCTC         TTTCTATTATTTATT 100 32
LT978_RS15585 NONE
LT978_RS15580 NONE
LT978_RS15575 NONE
LT978_RS15570 NONE
LT978_RS15565 3187752 .. 3187772 - -12.6  -5.64274   GCATTCATAAAAAAA            TCCCTGCC GAAAA GGCAGGGA            TTTTATGTTTCAACC 100 28
LT978_RS15550 NONE
LT978_RS15545 3182418 .. 3182433 -  -6.8  -5.80951   AGGGAAAACAAAAAA              GGAGCC CGTA AGCTCC               CTTTTTTTTTATGAT 100 34
LT978_RS15540 3181376 .. 3181402 - -12.3  -5.52909   TAACATCGAAAAAAA         GAGCTGCCCCC GTATG AAGGGCAGCTC         CTTTTTGATTACGCT 100 34
LT978_RS15530 3178196 .. 3178250 - -19.6  -3.02829   GACATCTGTGTAAGA TAAAAAAAGCCGGTATGACCCGCCG TCTTCT CGG-GGGCCGTACCGGCTTTTCTTA ATTCTCAAGTTCTTC 100 23
LT978_RS15525 3177607 .. 3177622 -  -7.6   -4.7261   ATCCATTAAAAGAAA              CGCTAT ATCC ATAGCG               TTTACAGCAAAATCA  84 38
LT978_RS15520 3176353 .. 3176378 - -15.5  -5.19879   CTGTAAACACAAAAA         GGAACTCCCGC CCGT GCGGAAGTTCC          TTTTTTTCTTAATGT 100 34
LT978_RS15510 3173461 .. 3173479 -  -8.1  -5.88565   TTTACAATAAAAAAA             GAAGGGC TTCCC GCCCTCC             GTTTCTTATTTCTCA 100 31
LT978_RS15505 3172929 .. 3172947 -  -7.4  -5.55664   TGATGATGAAAAAAA             GGAGGG CTTTGTC CCCTCC             TTTTCTGCTTTTTCG  93 43
LT978_RS15490 3170838 .. 3170864 - -11.6  -5.49809   GAAACCGCAAAAAAA         TCCCAAGGGACC GAA AACCCCTTGGGA         TCTGTTCAGCTTACG 100 36
LT978_RS15485 3169411 .. 3169434 - -12.6  -5.26875   TTGTTAATTAAAAAA          CACAAAGGAA TATT TTCCTTTGTG           CTTCTTGTTTATTAT 100 37
LT978_RS15480 3167858 .. 3167875 - -11.3  -6.04953   ACAGAAATAAAAAAA             GGCAGAC CTGA GTCTGCC              TTTTTTCTTCTACCA 100 35
LT978_RS15475 3167051 .. 3167070 -  -3.6  -5.67283   AACCTAAATAAAAAA            GGTGAT TTCTTTTC ATCACC             TTAATCCGATCCTTG  89 26
LT978_RS15460 3159237 .. 3159261 -  -6.5  -5.71712   TTTTAGAGAAAAAAA          GACCTAACT GTGCATA AGTCAGGTC          TTTCATCTTTAAAAT 100 59
LT978_RS15455 3155880 .. 3155897 -  -9.9  -5.48787   ATAACACATAAAAAA             GACTGAC CGAA GTCAGTC              TGCAATCTATCAGGA 100 35
LT978_RS15450 NONE
LT978_RS15445 NONE
LT978_RS15440 3152443 .. 3152466 - -16.8  -4.62475   ATTTATAAATCAAAA          GCCTTCCGCA AATA TGCGGAAGGC           TTATTTTTCGCTGCT 100 26
LT978_RS15435 NONE
LT978_RS15430 3150107 .. 3150127 -  -9.7  -5.52023   ACTACGAAGAAAAAA            CACCTGTGA TTT TCGCAGGTG            TTTTACAAAACGGAA 100 28
        nosA 3148756 .. 3148767 -  -5.8  -5.00616   CGGCTGGGTAAAAAA                CCGT GATG ACGG                 CCGGGTGGAAATCCT  81 173
LT978_RS15415 3147891 .. 3147914 - -13.9  -2.98778   GCATAACGTAAATCA          GCCGTGCTG TCAGTG CAGCACGGC           TTTTTTTCTATACAT  95 33
        nagE 3144637 .. 3144660 - -15.4  -5.76949   TATGCTCAAAAAAAA          TCCGGATCAC ATAG GTGATCCGGA           TTTTTCAAGTCTGCT 100 30
LT978_RS15385 3144056 .. 3144089 - -14.1  -4.78157   ATCAAAAAGAATAAA     CAAAAGCCAGATCAT TGAT ATGATCTGGCTTTTT      TATGTTCAGCTCCCG 100 31
LT978_RS15375 3141172 .. 3141200 -  -3.1  -5.60993   CTCCTTACAAAAAAA        CACCCTGACTTAT GAT ATTTATCAGGATG        AACAGCACACATTTG  85 319
        treP 3138799 .. 3138823 -  -5.7  -4.37198   AATGGAAAGGGAAAA         GGGACAGCCT GTTAGA AGGC-GCCCC          GCAGGTTTTCTATTT  69 35
        treC NONE
        treR 3136309 .. 3136328 -  -9.2  -5.65177   ATACTGACAAAAAAA            CGGGCTGC CGCG GCAGTCCG             TTTTTATTTTTCTCT 100 29
LT978_RS15340 3135492 .. 3135530 - -12.5  -4.67692   GCAAAACCAAATAAA   CATTAAAAGCTGCCGGG ACACG CCCGGCAGCTTTTTTTA   TCTTATACCCACTTT 100 28
LT978_RS15320 3128326 .. 3128351 -   -14  -5.61596   ATCTTCACAAAAAAA         GCGGAACGCC TGATAC GGCGCTCCGC          TTTTATATTACGCAA 100 33
LT978_RS15290 NONE
LT978_RS15285 NONE
LT978_RS15280 3121688 .. 3121711 - -11.7  -5.36441   CGGCCACATAAAAAA          GCCGCCTGA TCTGAG CCAGGCGGC           TTCTTTCTAGTGGTA 100 183
         cax NONE
LT978_RS15265 3118393 .. 3118416 - -11.1  -5.43414   ATCACACACAAAAAA          GCTGATTCC CGAACC GGAATCAGC           TTTTTTTATTTATCT 100 35
LT978_RS15250 3116086 .. 3116103 - -14.1  -5.63236   ATGGAAAAAGAAAAA             CCCCGGC ATCC GCCGGGG              GTTATTCCCAATCCT 100 27
        pdaA 3115184 .. 3115208 - -11.5  -5.02606   TATCAAATAACAAAA          CACCTCTCC ATTACCA GGAGAGGTG          TTTTCTACAGGCGCG 100 30
LT978_RS15225 3111612 .. 3111622 -  -2.4  -3.35832   AAAGTTTCCAAAAAT                 CCTC AAA GCGG                 TTTTTCATTCAATAC  45 30
        rlmD 3110026 .. 3110038 -  -2.6  -5.60993   CTGCGCATAAAAAAA                CCCG GAAAT CGGA                AATGTTTATACCGAA  80 69
LT978_RS15215 3108974 .. 3109001 -  -3.4  -4.89562   CCAAAACCAATAAAA        TAGACTGCTG-AC TAA GTGCCGCAGTCTT        CATTCATAAGATTAA  69 80
LT978_RS15210 3107210 .. 3107238 - -15.3   -4.9725   AGCTGCACACAAAAA        GGCCCGGAATTCA AAC CGAAATCCGGGCC        GGATGATGAGTTGTT 100 45
LT978_RS15205 3106517 .. 3106535 -  -6.6  -5.37043   ATGGCATACAAAAAA             GACCGGGC ATC ACCCTGTC             TTTGACAATGATCGA  89 112
        acoA NONE
        acoB 3104323 .. 3104337 -  -4.2  -2.52464   CCCTCCTTTAATTCA               TTGCCG GCT CGCCAA               GCAATTCAAGCGTGA  47 3
LT978_RS15190 NONE
        lpdA 3101681 .. 3101706 - -12.7   -4.8622   GCTTTCAACGAAAAA         TACCCCTTCTC ATCT GAGAAAGGGTA          TTCCGGTTATACGGA 100 32
LT978_RS15180 NONE
LT978_RS15175 3099523 .. 3099544 - -12.3  -4.76041   CACAGGTACGAAAAA           GGCCTGCTG TCAT CAGCAGACC            CCTTCTCAAAAATGC 100 31
        glvA 3097970 .. 3098023 -  -6.5  -4.62783   GACTCATCCCAAAAA TCC-CCCCGTTTTCT-T-TCTATTAT ATAGA ATAACAGATAAAGAAAACGGGGAAGA TTGTCATCAGGAAAT  77 32
LT978_RS15165 NONE
LT978_RS15160 3095569 .. 3095588 -  -9.3  -4.98672   GCGAAAAAGATAAAA            CCTTCCC GGGGAG GGGAAGG             TTTTGACCTTATTGA  91 34
LT978_RS15155 NONE
LT978_RS15150 3091893 .. 3091916 - -11.8  -5.75342   TCTTCGCAAAAAAAA          GACCTCCG-CA CTC TGTCGGAGGTC          TTTTTCCCTACCTAT 100 37
LT978_RS15145 NONE
LT978_RS15140 3090451 .. 3090474 - -13.9  -5.69262   TTAGAAAAATAAAAA          CCCTTGCCG GTTAGA CGGCAAGGG           TTGTTTCTTACAGTG 100 33
        cyoE 3089126 .. 3089155 -  -2.1  -5.06089   AAAGCATAAACAAAA      CGGGGCGGCTCTG TATCTG CAG-GCCGCCT-G       TTTACGTTCTGAGAA  69 27
LT978_RS15125 NONE
LT978_RS15120 3086629 .. 3086646 -  -9.8  -4.72986   GACCCGTATCAAAAA             GGCGGC CGAAGC GCCGCC              TTTTTTTCAGACTGT  91 32
LT978_RS15115 NONE
LT978_RS15110 NONE
        bstA 3082877 .. 3082894 -    -7  -4.83269   AGAGGACATCAAAAA             CCGCTT AACGAA AAGCGG              CATTCCCGCTGATCA  83 253
        mprF 3078232 .. 3078250 -  -8.8  -5.75945   ATTCTTCAAAAAAAA             GACGCCTT TTA ACGGCGTC             TTTTTTTGGTTTTTC 100 15
LT978_RS15085 NONE
LT978_RS15080 3076570 .. 3076595 - -15.5  -3.92324   CCCGCTAATACGAAA         TCCCCGCCTCT GTAT AGAGACGGGGA          TTTTTTTACAACTCG 100 31
        recX NONE
LT978_RS15055 3074006 .. 3074023 - -12.7  -5.45802   GCCCGAAAAGAAAAA             GAGGCCG GAAC CGGCCTC              TTTTGTTATTATTTT 100 34
LT978_RS15050 3072658 .. 3072685 -   -15  -5.18561   GAAACACTGAAAAAA        GCTTGCAGGCGGA ATA TCC-CCTGCAAGC        TTTTTGTTATCCTTT 100 32
LT978_RS15030 3070665 .. 3070685 - -14.7  -5.98675   TATAAAAAGAAAAAA            CCGCCGGAC GGT ATCCGGCGG            GCGCACTGCTATATT 100 39
LT978_RS15025 3070014 .. 3070031 -  -6.2  -5.60993   GGTTTCAGAAAAAAA             GCAGGC TTATTC GCCCGC              CTGAATCTTTACTTT  89 34
LT978_RS15020 NONE
LT978_RS15015 3068740 .. 3068770 -    -4  -6.00086   ATATGAGAAAAAAAA       GAAAAAGTCTGTAC GCG GGACAGACTTTATT       GCTGAAGGTATTCAT 100 21
LT978_RS15010 3067544 .. 3067562 -    -3  -2.68823   TTTTTTTCATACAAC             GTCCCCAG ACC CTGCGCAC             AGCGGCGGCTGTTTA  41 38
LT978_RS15005 3064941 .. 3064965 - -11.4  -4.47686   GCAGAAAAAATTAAA          GCTCGGCTCT GTTTA AGAGCCGGGC          TTTTTTTGTCTTCTC 100 13
        mutY 3062581 .. 3062593 -  -6.9  -3.30969   ATTCAGGAAATCGAA                GCCCG CGG CGGAC                TGAAACGGAATGAAG  59 85
        fabL 3061595 .. 3061609 -  -3.5   -2.6999   TTAAAACTTATACGA               GCAGA GAGCG TCCGC               CGTCAATAATGATGG  43 3
LT978_RS14980 3061309 .. 3061333 -    -8  -5.49569   TAGCAACAGAAAAAA         GCACTTCCATC CGAA GATG-AAGTGC          TTTTTCGTTTCAGTG 100 42
LT978_RS14975 3060895 .. 3060920 -  -7.5  -5.24291   AAAATGAAAATAAAA         GAACCACTCCG CTTC CGGAATGGCAC          ATTCATTTCTGCACA 100 28
LT978_RS14970 3060221 .. 3060240 -  -8.6  -4.62336   AGCCCATGTGAAAAA            CCTGTTGA CACC CCAACAGG             TTTTTTATTGTATTC  86 42
LT978_RS14965 3058396 .. 3058423 - -15.6  -5.47218   TTGCATTCAAAAAAA        CGTATGCCGACC ATTC GGACGGCATACG         TTTTTGTATCAGTTC 100 34
         bcp NONE
        perR 3054558 .. 3054597 - -19.6  -4.24338   AAAAACAGTGTAAAA  TAAACGAAGCTGACCG TATCAAAG CGGTCAGCTTCGTTTA   GTGGTTTTCTTTTTT 100 23
LT978_RS14935 3052892 .. 3052908 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 237
LT978_RS14930 3051119 .. 3051129 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 237
LT978_RS14925 3048123 .. 3048142 -  -2.2  -3.88001   TTTCAGAAAAAGCAA            GAGTTTTT TTGA AAAAATTC             TCTCAAAACTAGATA  52 61
         rrf NONE
LT978_RS14915 NONE
LT978_RS14910 3047793 .. 3047805 -  -3.3  -3.25942   AGTGGCGGAGAGCAA                GGGAT TCG AACCC                TTGAGACGGGGTTAC  48 0
LT978_RS14905 NONE
LT978_RS14900 NONE
LT978_RS14895 NONE
LT978_RS14890 NONE
LT978_RS14885 NONE
LT978_RS14880 NONE
LT978_RS14875 NONE
LT978_RS14870 NONE
LT978_RS14865 NONE
LT978_RS14860 3046888 .. 3046902 -  -2.1  -2.89655   GTTTTCAAAAAAATG               CAACT GGGCT AGCTG               GATTCGAACCAACGC  42 11
LT978_RS14855 NONE
LT978_RS14850 NONE
LT978_RS14845 3046502 .. 3046524 -  -4.1  -5.74122   TATTATATAAAAAAA           GCGACCTGC AATAA GCAAATCAC           TCTCATATATGTTTT  89 91
LT978_RS14840 3046233 .. 3046255 -   -15  -5.60689   TTATACAACAAAAAA           GGCTTCTACA ATA TGTAGAAGCC           TTTGTATACCGGTGG 100 32
LT978_RS14835 NONE
LT978_RS14830 3044588 .. 3044609 - -11.6  -5.67967   ACCAGCACAAAAAAA           CCGGGTTC AAAGAA GAACCCGG            TTTTGCAGTCAGAAA 100 226
        thiC 3042720 .. 3042748 - -14.8  -5.00616   CGTTTTTCTAAAAAA        GATGAAGATGGA CACAC TCCATCTTCATC        TTTTCTTTTATTGAT 100 33
LT978_RS14815 NONE
LT978_RS14810 3039159 .. 3039194 -  -9.8  -3.53012   TCCTTTCCGCTGAAA    GGGCAAAATCCCC-AGG ATG CATCGGGTATTTTGCCC    AACCGTTCTATTGAA  79 33
LT978_RS14805 NONE
LT978_RS14800 NONE
LT978_RS14795 NONE
LT978_RS14790 3035247 .. 3035286 - -17.5  -4.25256   CCGTCACCAAAATAA  CATCAAAAAACCTGCCGG TCTGC CCGGCAGGTTTTTT-ATG  TTCATTATCAATAAA 100 57
LT978_RS14780 3032431 .. 3032466 -   -17  -5.63236   ATCGAAAAACAAAAA    GGCTCCCATCTCCG ATTGCTTG CAGAGATGGGAGCC     TTCGGCGGTCCGATC 100 168
LT978_RS14775 NONE
LT978_RS14770 NONE
LT978_RS14765 NONE
        ssuD 3028528 .. 3028545 - -12.7  -4.59853   CTAAGCGCTTAAAAA             GGCGGGT GAAT ACCCGCC              TTCACTGCCGGCATT 100 99
        rpsN 3028142 .. 3028165 -  -8.1  -4.64598   TAAGCACGGCAAAAA          CTCCGGTTC ATGACA GATCCGGAG           TTTTTACATTACCAG  86 34
LT978_RS14740 3027173 .. 3027209 - -10.3  -5.71712   TTTCACATAAAAAAA    CGCAATACTTCGTTTAT CAG AGAAACGAAACACTGCG    TTAATAACGTATGTA 100 40
        queG 3025227 .. 3025247 -  -6.1  -5.72622   TTTATAAAGAAAAAA            CACTTGAAC TCC GGCCAAGTG            CTTTTTCTCTATACA 100 45
LT978_RS14725 NONE
        trmL 3023737 .. 3023752 - -11.8   -5.8187   TATTCAATAAAAAAA              CGCCCG GATG CGGGCG               TTTTTTCTCACGTCA 100 33
LT978_RS14715 NONE
LT978_RS14710 NONE
LT978_RS14705 3021508 .. 3021546 - -11.9  -4.43397   CCTGAAAACAAATAA  CGGCAAAAGGGTGCTCTT AATG AAGAGCACCCTTTC-CTG   TACAACATAACAATG 100 43
        prkA 3019270 .. 3019289 -  -7.1  -4.45187   AAACAGACAAAAGAA            CCCGTCC TTTTAC AGACGGG             CCTCTCAATGAAATC  78 46
        yhbH 3017894 .. 3017933 - -19.4  -5.15969   TTTTAATTTAAAAAA  GCCGGGTGAAGAACCGCG GCCG CACGATTCTTCACTCGGC   TTTATATTTAATACG 100 33
LT978_RS14690 NONE
LT978_RS14685 NONE
LT978_RS14680 NONE
LT978_RS14675 NONE
LT978_RS14670 3013975 .. 3014002 - -12.1   -5.7946   TCTTCAATAAAAAAA        GACAAATCCGC TCTTAC GCGGATTTGCC         TTTTCAATTACTTCT 100 33
LT978_RS14665 NONE
LT978_RS14660 NONE
LT978_RS14655 NONE
LT978_RS14650 NONE
LT978_RS14645 3010147 .. 3010170 -   -14  -4.68645   CATCTAAAACGAAAA          GCTGTTTTGC AAAG GCAAAACAGC           TTTTTTATATCAGGT 100 35
LT978_RS14635 3008655 .. 3008682 -  -5.6  -5.82316   AGCACTGAAAAAAAA        GAATGATCGCCC GAAG AGGAAATCATTC         TTTCTTTTCAGTGAG  95 20
LT978_RS14625 3005982 .. 3006007 -  -9.9  -5.42514   TTAGAAACGAAAAAA         TCCTTCATTCGT TCA ACGA-TGAAGGA         TTTTTCGTTTTAGCG 100 56
LT978_RS14615 3004778 .. 3004794 -  -9.4   -5.8901   AGATAAAATAAAAAA              GCCGCA GCAAA TGCGGC              TTTTCCATTCATTTA 100 38
LT978_RS14610 3003435 .. 3003447 -  -3.3   -4.4009   GTCTACGGTATAAAA                CCGAC TCA GCCGA                AAAAACCGAATCAAT  63 320
LT978_RS14600 NONE
LT978_RS14595 2999746 .. 2999778 -  -6.3  -3.52204   CCATTTTCAAATCAA     CGGCGAACA-AGCG AAAGTG CGCCACGTTCACCG      TCTTGACCGTGACAC  61 524
LT978_RS14585 2998839 .. 2998856 -    -7  -5.32565   CAAGGAAGCAAAAAA             GAGCCT GTCAAA AGGCTC              TTTATACCCGTCAGA  91 36
LT978_RS14580 2998282 .. 2998303 - -10.9  -3.96216   TTCTCACGGAAAGAA           GAGCCTGCA TGAG TGCAAGCTC            TCTTCATCCGTTACT  86 36
LT978_RS14575 NONE
LT978_RS14570 2995938 .. 2995958 -  -7.5  -5.60993   GTTTTTATAAAAAAA            CCCGCCC TTAAGCG GAGCGGG            CGTTTTTTTATTTCA 100 33
LT978_RS14565 NONE
LT978_RS14560 2993665 .. 2993716 -  -3.3  -5.62045   ATAGAGAATAAAAAA CCCACAACAAACCGCTTTACG CTTTATTGCTTC CGTAAAG-AGCT-GTTGTGGG TCTCCGGGTCTCCAT  81 88
LT978_RS14555 NONE
        glpK 2991168 .. 2991216 - -16.4   -4.9792   CACGGTATAGAAAAA GAGACCACAACAGCCAAAGCGCAT GTC AT-CACTTTGG-TGCTGTGGTCTC TCCTCATCTCAGGAC 100 81
        glpD 2989429 .. 2989460 -  -9.5  -4.98672   TGTAAAAAGATAAAA      GAAGGGCTCATGCC TTTTC GGCAC-AGCCCTCC      GGTTATTATTGTTCG  91 31
LT978_RS14540 2987553 .. 2987575 - -14.8  -5.61596   AGGCGTATAAAAAAA           CCGCCGGATG TCG CTTCCGGCGG           TTTGTTGTTTATTTC 100 34
LT978_RS14535 2986307 .. 2986317 -  -3.2   -2.5001   ACAATTTTCATCAAT                 CAGA CCT CCTG                 TCCCGAAACGGAAGC  43 10
LT978_RS14530 NONE
LT978_RS14525 2985123 .. 2985149 - -15.2  -4.53303   CATGCTGACATAAAA         CAATCCCGGCGT CAG ACGCCGGGATTT         CTTGTGTTTGTGAAC 100 10
LT978_RS14515 2984331 .. 2984358 -  -9.8  -3.34962   TCTGATATCTGATAA        GCTGTACGGCCT CATA AGGCTGTGCAGC         TTTTTTACAGTCTGA  78 30
LT978_RS14495 2978984 .. 2979035 -   -19  -3.37487   TCACATCCTGAAACA CGGAAAATAAAAAAGGATGCGGGG ATTT CCCCGCATCCTTTCTTCTTTTACA GATATCTCCGGTGCA 100 21
LT978_RS14485 2976301 .. 2976318 - -11.3  -5.63517   CGTCTAAATAAAAAA             CCCGTTC GGAT GAACGGG              TTTCTCTCACTGCTA 100 38
LT978_RS14475 2974133 .. 2974147 -    -7  -2.86728   ATTACTGAGACGATA               CCACGC AGT GCGGGG               AGTTAAACGGACAAA  60 52
LT978_RS14470 2973187 .. 2973211 - -12.9  -5.38326   GTAATCAAATAAAAA          TCCCGCCCTTT TTA AAAGCGCGGGA          TAAAACTTGCGTATT 100 39
LT978_RS14465 2971471 .. 2971490 -   -15  -5.61881   TCCGAAAAATAAAAA            GGAGCGGC GGGT GCCGCTCC             TTACAAATCCCCGTT 100 26
LT978_RS14460 2969995 .. 2970015 -  -9.7  -5.19879   TTTTAAACATAAAAA            CAGGCCC TTTTACG GGGCCTG            TTTTTTTAAAATGAA 100 31
LT978_RS14440 2967274 .. 2967301 -   -15  -5.59534   AAGCATAACAAAAAA        GCTTGCGCGTCTG ATA CAGACG-GCAAGC        TTTTTTTCATTTACA 100 36
LT978_RS14425 NONE
LT978_RS14420 2962780 .. 2962800 - -11.2  -5.00895   TTCATCATATAAAAA            CAGCCTTC AAAAA GAAGGCTG            CCGTTATCTGCTTCG  93 29
LT978_RS14415 2961178 .. 2961202 -  -7.2  -5.47821   ATCCATTTAAAAAAA          CCTTGAGC TTATTTTTC GCTCAAGG          TTGCGTTATGAAGCA  91 9
LT978_RS14395 2959356 .. 2959380 -  -7.1  -4.60041   AGGCAGCCTGAAAAA          CCCCGGC ATCAGAGCACA GCCGGGG          TTTTCACACATTCGT  79 74
LT978_RS14390 2958139 .. 2958162 -    -6  -5.20216   CATATCATGAAAAAA          GAACGGCGCCT GTT ATGC-CCGTTC          TTTTTCTCCGGAATG  84 14
LT978_RS14385 2957320 .. 2957358 - -13.4  -3.14211   ATTCCCGTCCATGAA   TAAGAAAAGCCGGATC TGTATAG GATCCGGCTTTTTTTA   TGTCGCGGCGCTGAT  95 23
         dat 2955336 .. 2955354 - -11.7  -4.88407   TGACTGAAGCAAAAA             GGCCGGA TGTGT TCCGGCC             TTTTTTTCAGCTTAT 100 37
LT978_RS14365 2954054 .. 2954073 -  -7.9  -3.53343   AATTCTTTCTGTAAA            GCAGCTT AATCAA AAGCTGC             TTTTTTTACAGCTCC  68 31
LT978_RS14355 NONE
LT978_RS14350 2949315 .. 2949336 - -10.9  -5.28481   TACTGAATGAAAAAA           GGGCGAATC TTTT GATTCACCC            TTTCCGATTACACCG 100 33
LT978_RS14315 NONE
LT978_RS14310 2943421 .. 2943445 - -12.9   -5.7946   TGTTGAATAAAAAAA          CCCCTCCATTT CAT AGATGGAGGGG          TGTGGAGCTTATTGC 100 34
LT978_RS14300 2940991 .. 2941019 - -12.5  -4.77157   TCAATCCACGAAAAA       GCCGCAGAC-CG GCGTTT CGCGTCTGCGGC        TCTTGATTACGGCCG 100 32
LT978_RS14295 2939381 .. 2939401 -  -9.7  -5.88197   TTAAACATAAAAAAA            CGGCACG CTGATTC CGTGCCG            TTTTTGATATTATAA 100 35
LT978_RS14290 2938000 .. 2938022 -   -15   -6.2845   AATCATAAAAAAAAA           CTGACCTCTT CAT AAGAGGTCAG           TTTTTTTGAGCGGGA 100 22
LT978_RS14270 2934883 .. 2934933 - -12.8  -2.71924   CACCGCTTGGTAAAT GAAGCCGGAAAGCTGATTTTAT TCCACAG ATAACAGAAGCTTTCCGGCTTC TGTATTTTACCGGTT  89 32
LT978_RS14260 NONE
LT978_RS14255 2932449 .. 2932469 -   -14  -6.09196   TGTAAAATAAAAAAA            CAGCCCGG CTGTT CCGGGCTG            TTTCATTTATTTTTT 100 32
LT978_RS14250 NONE
LT978_RS14245 2928227 .. 2928239 -  -2.7  -2.83249   TCTTACATAATACCA                GTATA GCA CATAC                CTCTTTTTTGAAAAT  42 49
        yhaM 2927215 .. 2927236 -  -4.4  -5.15969   GCTGAACGTAAAAAA           GACCGATC ATAGAG AATCGGCC            TTTTTATCTTATTGA  75 34
LT978_RS14235 2926870 .. 2926897 - -12.1  -6.23545   TCTAAATAAAAAAAA        CTGTGCGGGCTC TCAGC GAGCC-GCACAG        TTTTTTTATGCGATG 100 31
       yhzE1 2925734 .. 2925760 -   -16  -4.63218   GCCCGGGTAAGAAAA         CGGACCGCTTTT AGA AAAAGCGATCCG         TTTCGCTTAACAAAT 100 32
       yhzE2 2925513 .. 2925547 - -19.4  -5.54264   AAACAGGCAAAAAAA     TATGGCTGACGGAGGT CTG ACCCCCGACAGCCATA     TTTTTTTCTTAATAA 100 34
LT978_RS14205 2923919 .. 2923929 -  -6.8  -3.53343   AACGCGGTGTTTAAA                 GGCT CAC AGCC                 GATCTACCACTTATT  61 233
LT978_RS14190 2922640 .. 2922659 - -12.2  -3.71645   AACCGCATACCGAAA            CCTCTTCC GGCC GGAAGAGG             TTTTTTAATGTGTTT  90 50
        ecsA NONE
LT978_RS14165 NONE
LT978_RS14160 2917123 .. 2917147 - -16.5  -6.02914   CTGACATAAAAAAAA          CAGCCGGTACA TTA CGTACCGGCTG          TTGTAATTCTTAAAT 100 12
LT978_RS14140 NONE
        hemE NONE
        hemH NONE
        hemY 2907923 .. 2907945 - -10.6   -5.1615   GGAACATGCAAAAAA           CCTCCGTTTT ACG ATAACGGAGG           CTGGTACGTTTCAAA  93 11
LT978_RS14120 2907196 .. 2907230 -  -9.5  -4.66609   CACGGCACCTAAAAA     GTGAAGGATCATCTA TTATT TAGATAATCCTTGAC     CAACATACATTTCCA  88 6
LT978_RS14115 2904759 .. 2904807 - -23.6  -2.85354   GATTTTAATCGAAAT CA-AAAAAAAAGAGGCGCTGAGC ATCT GCTCAGCGCCTCTTTTTCTTATG CTGTTATTTCTTCTT 100 21
LT978_RS14100 2902200 .. 2902237 - -17.9  -3.08224   ATCTCAGGTTAAAAT   GAAAACCCTGCACGGAA TGAT TTCCGCGCAGGGTTTTT    TATGCCATCGGCGAT 100 25
LT978_RS14085 2899635 .. 2899645 -  -2.4  -2.77135   GTCGATAAATAACAT                 GGTG CTC CTCC                 TTTATTTCTCCCACT  41 27
        lplJ NONE
LT978_RS14075 2897873 .. 2897898 -  -7.6  -5.20633   AAAAATATAGAAAAA         CACTCAAGGGC AAAAA GCCC-CGAGTG         CCGTAAAACCGGAAA 100 41
LT978_RS14070 2896212 .. 2896230 - -14.6  -4.21908   GATCAGCATGTAAAA             GCGAAGCC CCC GGCTTCGC             TTTTCGTCCGTCATT 100 36
LT978_RS14060 2894360 .. 2894384 -  -9.2  -5.63645   GTAAAACATAAAAAA         CCGGCGTCGGC CATG GCCC-CGCCGG          TTTTTTTATTATTTT 100 34
LT978_RS14050 2891825 .. 2891845 -  -6.8  -5.24416   GAATCATAACAAAAA            GGCCCGAA TTAGT TTTGGGCC            TTTTTGGCGAGCATT  88 13
LT978_RS14015 2884027 .. 2884046 - -12.2  -3.73904   AAACAGAGTGAATAA            GCCAATCC ATAT GGATTGGC             TTTTTTTACATTATC  90 36
LT978_RS14005 2882852 .. 2882873 - -12.3  -4.81851   ATGTAAATCGAAAAA           GCCCTTCCC AAAA GGAAAGGGC            CCGTCCCTTCACATC 100 51
LT978_RS14000 NONE
LT978_RS13995 2881950 .. 2881967 -  -5.5   -5.7946   CGTTTAATAAAAAAA             CAGCCCT CCTC AGGGTTG              TTTTTTTAACATTTC  95 46
LT978_RS13985 2880651 .. 2880672 - -13.1  -5.47821   ATCCATTTAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTATTTCTCA 100 31
LT978_RS13960 NONE
        lepB 2876842 .. 2876861 -  -6.4  -5.41143   CATTTCCGAAAAAAA            GACGCC GTTCACTT GGCGTC             TGATTCACTGATGAC  89 14
LT978_RS13950 NONE
LT978_RS13945 2874590 .. 2874607 -  -9.9  -5.80364   ATCCGAATAAAAAAA             CACGCAT CCAT ATGCGTG              TTTTTTATTTGAACA 100 30
        addB NONE
        addA 2862484 .. 2862496 -  -4.8  -4.18494   CAGCTGTATGTAAAA                TGCG CATAC CGCA                TTCACCTCACTTTTT  63 84
LT978_RS13905 NONE
LT978_RS13900 NONE
LT978_RS13895 2857580 .. 2857606 - -11.7  -4.64657   GGAAACGCCTAAAAA        GCAGCCGCTCTT TCAG AAGAG-GGCTGC         TTTTGGTTCAGCGTT 100 39
LT978_RS13855 2854064 .. 2854074 -  -3.2  -3.41602   CTTATGGTACCACAA                 CAAG CCG CTCG                 GAGCATTATCAATCG  49 57
LT978_RS13850 2853624 .. 2853639 - -10.4  -5.95166   CGCAACTAAAAAAAA              CCCGGA TGCA TCCGGG               TTTTTCAAGCGATTG 100 42
        asnB 2850817 .. 2850844 -  -7.7  -5.18726   GTTTCACAATAAAAA        GACCGATATCC TTCAGC GGAAACCGGTC         GCGGCACTGTTATTC 100 35
LT978_RS13835 2849994 .. 2850022 -  -7.5   -3.9009   AAGGGATTGCATAAA       CGCCCCGAGCTTC GTTAA GAAGC-CGGG-CG       TTTTTTTATGCTTGC  74 31
LT978_RS13825 NONE
LT978_RS13820 2846572 .. 2846594 -  -6.2  -5.71712   TTTCACAGAAAAAAA           CGCGCCTT ATCGCTG AGGGCGCG           TTTTTACCGGTGCCG 100 9
        iolG 2845280 .. 2845302 -  -9.2  -5.38249   ATGAATCATAAAAAA           GCAAAGGC ATGCCGG GCCTTTGC           TTTTTTACTTCGAAT 100 44
LT978_RS13785 2839546 .. 2839567 -  -3.7  -5.86976   TGAGAAAATAAAAAA           CACCGGT TTTGGTTC ACCGATG            TTTTTGCAGAAAATT  93 40
LT978_RS13780 NONE
LT978_RS13775 2836736 .. 2836766 -  -7.7  -4.67038   TCTGTAAAAGCAAAA      CAGCCCTCTTGTCT TAGG AGA-AAGAGGGATG       TTTTTTGCGCACGGA  83 47
LT978_RS13760 NONE
LT978_RS13755 2834230 .. 2834254 -  -7.8  -5.80364   ATTGCAATAAAAAAA         GGCGCCC-CGT TTAG ATGAGGGCGCC          GCTTTTTTATTTTAC 100 32
LT978_RS13735 2832060 .. 2832076 -  -3.7  -2.64099   TTTCCTCAGTATAAC              GCAAAAG CGG CTTTTGT              TAACACCTTTGTGCT  45 41
LT978_RS13730 2831672 .. 2831711 - -10.9  -5.23292   GCAGACAAAAGAAAA  GCACCTCCAAACTTTAGG ATGTA CCTAAAATCCGG-GGTGC  ATTTTCTTATTACTG 100 35
LT978_RS13720 NONE
LT978_RS13715 2828859 .. 2828879 - -14.1  -5.18726   GTTTCATAAGAAAAA            CAGGCTGAT CGG ATCAGCCTG            TTTTTTTCAGCATCA 100 18
        argC NONE
        argJ NONE
        argB NONE
LT978_RS13695 2824445 .. 2824462 -  -4.3  -2.73203   TGATGAATAATTAAT             TAAAAAT ATGA ATTTTTA              TACCTTTATATCGAA  48 46
LT978_RS13690 NONE
LT978_RS13685 NONE
        argF 2819295 .. 2819315 - -14.1  -4.96106   GAGAAATATCAAAAA            CCGCTGAAT GAG ATTCAGCGG            TTTTTTTGTTCATCC 100 19
LT978_RS13675 2819027 .. 2819042 -    -9  -5.99154   CATTAAATAAAAAAA              CCTGCT ATTC AGCAGG               TTTTTTTGTGTTCAC 100 37
LT978_RS13665 2817799 .. 2817822 -  -6.7  -3.84394   CACACACAAGCCAAA          CAGCCCTCT GAAAAG AGATGGCTG           TTGTATTCTATTCAT  67 40
LT978_RS13660 2817086 .. 2817100 -  -3.5  -3.48981   AAAAGATCATGACAA               GCCTG GTGAT CAAGC               CATGTTCAACCCCTT  49 113
LT978_RS13655 NONE
LT978_RS13650 2815915 .. 2815935 -  -7.6  -4.18697   AAAATCATGTGAAAA            GCCACTTC ATGAA AAAGTGGC            TCTCTTTATTTATTC  75 31
LT978_RS13640 NONE
        fabF 2813289 .. 2813313 - -11.4  -5.64274   GCACGCACAAAAAAA          CCGGCCACCT TTTTC AGGCAGCCGG          TCAAAAACTGTATTA 100 38
LT978_RS13630 2812316 .. 2812333 -  -4.1  -2.90075   TTCCGCTGAAGCAGA             GGGAAAC ATAC GTTTCGC              TATCACAAAATATAG  47 149
LT978_RS13625 NONE
LT978_RS13620 NONE
LT978_RS13615 2808567 .. 2808593 -   -16  -3.56837   TTTTAAATAGGATAA         GAGAGGAAAGGA ACC TCCTTCCCTCTC         CAGGGCTTTTGCTAT 100 37
LT978_RS13610 NONE
LT978_RS13605 2806632 .. 2806651 -  -9.3  -5.80364   ATTGCAACAAAAAAA            TCTCCCG TTCGTC CGGGAGA             TCATTTCACATTTTT 100 26
LT978_RS13600 2805726 .. 2805747 - -13.7  -6.12328   AGAAGATAAAAAAAA           GAGGCGGGA GAAT CCCCGCCTC            TTTTTTTAGTTCACT 100 31
LT978_RS13590 2802292 .. 2802320 - -16.2  -4.29227   GTAATCAGTAAGAAA        GGTATATGGGGA CATCC TCCCCATATACC        TTGGGTCTTTTGTTT 100 54
LT978_RS13585 NONE
        oppC NONE
LT978_RS13575 NONE
        oppF 2798354 .. 2798378 - -17.3  -5.40474   ATGTGCGCAAAAAAA          TCCTCCAAGAC TCA GTCTTGGAGGA          TGATACGTTTATAGA 100 34
LT978_RS13565 NONE
LT978_RS13560 2796291 .. 2796316 -  -2.1  -3.93769   ACTTTAAAAAAGGAA         TCTTTATAGGTA TTA TA-CTATAAAAA         AGTAAGTGTGAACAG  52 106
         spx 2795772 .. 2795795 -  -7.5  -5.51353   GAAAAATAACAAAAA          GCCC-AAACC GCGAT GGTTTTGGGC          TTTTTCCATGCTTAT 100 53
        mecA 2794149 .. 2794172 -  -9.7  -6.17268   TCAGAACAAAAAAAA          CCGATTTCT GCTGAG AGAAATCGG           TTTGTTATGATGCAA 100 30
LT978_RS13535 2792673 .. 2792696 -  -5.4  -3.18274   TTTACTTCAAGCCAA          TTGAAAAAAC GATT GTTTCTCCAA           AAACTTGTGTTGTGA  54 195
        pepF 2790777 .. 2790799 - -14.2  -4.82901   GGGGTTTTAGAAAAA           GCCTGCGCAT TTA ATGCACAGGC           TTTTTTGAATTACGA 100 35
LT978_RS13500 NONE
        yjbM 2786340 .. 2786354 -  -2.8  -3.08812   TCCTTTTGAAGAAAC               GGCA AATTTCA TGCC               ATTCCCCTCCTTTCC  44 44
LT978_RS13490 NONE
LT978_RS13485 2784616 .. 2784641 - -11.2  -5.53991   CAGGCATGAAAAAAA         GCCCGAAACCG GTAAA CGGTT-CGGGC         TTTACATGTGTTCAA 100 27
LT978_RS13475 2781569 .. 2781593 - -10.8  -6.14618   GATAAAATAAAAAAA          CCACTTTCCC GCATT GGAAAAGTGG          TTTGGAATTTAAATG 100 220
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG NONE
        thiF NONE
        thiD 2776306 .. 2776327 -  -4.4    -4.652   AAAGCATGGGAAAAA           GACCGC GGATGTTGAA GCGGTC            TCTTTTTTATCTCGT  68 32
        fabI 2775399 .. 2775419 - -11.9  -5.82036   AGAAGAAAGAAAAAA            GCAATCCCT GAA AGGGACTGC            TTGTTATTTAACGTG 100 33
LT978_RS13430 2774683 .. 2774709 -  -6.5  -4.59919   AAAGCATAAAAATAA         GCTGCCGGATT AAAGA ATTCAGGCAGC         TTTTTGTATGGTTAA  77 37
LT978_RS13400 2771351 .. 2771379 - -13.3  -5.00616   GCGTTCGGCAAAAAA        CAAAAAAACCGGA AGC TCCGGTTTTTTAG        AAAACGGCTATTTCG 100 228
LT978_RS13395 2770792 .. 2770815 - -11.7  -3.12606   TCATACATTAGGGAA          GCACGGGAC TGAACG GTCCCGCGC           TTATCCAAAGTCTTG  83 308
LT978_RS13385 2770354 .. 2770379 - -19.1   -4.0942   CACTCAGGATATAAA         GAACCCGGCAG ATCA CTGCCGGGTTC          TTCTCACATAAAAAG 100 67
LT978_RS13375 2767671 .. 2767686 - -10.4  -5.41143   TACGGCTCAAAAAAA              CCCGGA GATT TCCGGG               CTTTTTCACACATAT 100 31
         bla 2766838 .. 2766865 -  -6.9  -5.80248   GAAGAGATAAAAAAA        GCCGGCACTCC GTAATG AGAGCGCCGGT         CTTCTTTTTTACGTT 100 34
LT978_RS13335 NONE
        metC 2760593 .. 2760619 - -10.2  -6.09196   TCTAAAATAAAAAAA        GGGCG-CGTCA CAAAAT TGACGGCGCCC         TTTTCGTTTATGATC 100 33
LT978_RS13325 2760390 .. 2760406 - -12.3  -5.41359   AAGCAAAGTAAAAAA              CCCTTGC TAC GCAAGGG              TTCTGGCTATGATTC 100 33
LT978_RS13315 2758271 .. 2758292 -  -2.9  -4.57837   AGACCTTTTTAAAAA           GATTGAAGC TCTA GCACCAACC            AATTCTAAACTTTAC  65 367
LT978_RS13295 2755062 .. 2755082 -  -5.4  -5.39721   TCATCATATAAAAAA            GGTCAAGG ATATA CCTTGACT            ATGTATTAAGCTTAC  83 37
LT978_RS13290 2753989 .. 2754027 -  -4.7  -2.61094   AAAAGAATCAGCAAT   GCCAATGAAAAAACAAA TGATG TTTGCTCTTTCAGTGTC   CTTATTAAATCCTCA  46 372
LT978_RS13270 2751669 .. 2751683 -  -2.1  -3.09933   CCTCAATCCATTCAA               TCCAG TACAC CTGAA               CACTCCTCACCTAGT  43 32
LT978_RS13265 NONE
LT978_RS13260 2750399 .. 2750413 -  -2.9  -4.20875   CATCAAAAAATAGAA               GATTT TTTCG AAATC               ATGCTGCCACAGTCA  58 83
LT978_RS13255 NONE
LT978_RS13250 NONE
LT978_RS13245 2747860 .. 2747893 -  -2.4   -5.4659   TAAGATAAATAAAAA     TAGACTCCCTCA AAGTTAATGG TGAGGGGGTCTT      GAGTATGCGGCCGAT  75 129
LT978_RS13240 2746941 .. 2746951 -  -2.4  -2.61695   CGCACCCGTAAACAT                 CCGG CCC CCGC                 TCCCATAAGTAACAC  40 77
LT978_RS13235 2746180 .. 2746225 - -11.9  -5.27335   CCGTGCAAATAAAAA CGGACACCAATCAGAGCATAG TGAG CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 124
         bla 2745031 .. 2745051 -  -7.6  -5.47431   TCAACATATAAAAAA            CCGTCCAT AAAAA ATGAACGG            CAATGTTTATTTAAG 100 32
LT978_RS13225 2744588 .. 2744604 - -12.3  -5.37593   TTTCAAAGTAAAAAA              CCCTTGC GCA GCAAGGG              TTTTAATGAATGAAA 100 87
LT978_RS13175 NONE
LT978_RS13170 2731877 .. 2731899 -   -15  -5.26316   GCACCTCATAAAAAA           GCCCTCTTTT TAA AAAAGAGGGC           TTGCTAAATAGGACT 100 347
LT978_RS13160 2730581 .. 2730617 -   -11  -4.65263   ATGTTTGAAAAGAAA   TGACT-GCAGACAGGAG GCTT CCCCTGTCTGCTATTCA    ACTTTGACCGACAGG  90 19
        fdhF NONE
LT978_RS13135 2725340 .. 2725363 - -13.9  -5.27923   GAAGCGCACAAAAAA          CCCGAGCCT TCGGCC AGGCTCGGG           AGAAATGTTCACTCA 100 34
LT978_RS13130 NONE
LT978_RS13125 2722729 .. 2722754 -  -7.6  -4.91357   AAACATATAACAAAA         CAGGCAGC CGTCCGGTGC GCTGCCTG          TTTCTCAATCAATTT  86 34
LT978_RS13115 2721501 .. 2721536 -  -9.2  -5.63103   TGGCAATTAAAAAAA    TTCAGCAGGGAA GCGTAAGCTTTT TTCCCTGCTGAA     TGGTGGTTTATGACA 100 33
LT978_RS13095 2718084 .. 2718105 -  -5.9  -3.85504   AGCATGAAAAAGCAA           GATTGTGAA TTCA TGCACAATC            ATTTACAAAAATAAA  64 301
LT978_RS13090 NONE
LT978_RS13085 2716311 .. 2716339 - -12.6  -6.11644   TTATGCAAAAAAAAA       GACATTGCCGAGA AAAG TC-CGGCAATGTC        TTCTGTATGATCTTA 100 45
        uxaC 2714778 .. 2714792 -  -4.2  -4.09685   TTCCATTTTTTAAAA               GCGGAA ATA TTCCTC               AGCATTCCGGTAACA  61 5
LT978_RS13075 2713337 .. 2713347 -  -3.2  -3.21747   CTATTGTATCATTAA                 CGGA CAG TCCA                 TAAAATCACTAAAGT  46 34
LT978_RS13070 2712000 .. 2712029 -  -2.2  -5.40072   TCCCCCGCAAAAAAA       GCGTAAACAAAC CGTCCT GTTCGTTTAAAC        GTTTTATTTTCTCAG  75 283
LT978_RS13060 2709248 .. 2709269 - -10.1  -4.20354   AAGTGAATGCGAAAA           GGCGGTCTG TTGT CAGATCGCC            TTTTCCCTTATAACG  86 33
LT978_RS13055 NONE
LT978_RS13050 2707055 .. 2707081 - -15.3  -5.47159   TCTCAATATAAAAAA         TACGTGAAGCC TCTAC GGCTTCACGTA         TTCATTGCTGTTTGG 100 11
LT978_RS13045 NONE
LT978_RS13040 NONE
LT978_RS13035 2705054 .. 2705079 -  -9.1  -4.45544   CCTTACTAAGGAAAA         TAAGGGAATCC CTTT GAATCCCCTTA          AAATGAAAAAGTTAC  84 37
LT978_RS13030 NONE
LT978_RS13025 2703065 .. 2703092 - -12.9  -4.99645   AGGTTATAAAGAAAA        TCGGGATTAAC TCTTCC GTTAATCCCGA         TTCATTTACTCATAT 100 31
LT978_RS13020 2702666 .. 2702685 -  -5.7  -4.34482   TCCTTTAAAAAAAGA            GGGAGAC AGCTGG ATCTCCC             AGAGCATTGGAAATC  68 63
LT978_RS13015 NONE
LT978_RS13010 NONE
LT978_RS13005 NONE
LT978_RS13000 2696685 .. 2696708 -  -7.6   -5.8096   GACAAAAAAGAAAAA          GAATATGTAC GCAT ATACATATTC           TTTTTCGGATATGTT 100 40
LT978_RS12995 2693319 .. 2693335 -  -5.7  -5.24129   TTTTTCGATAAAAAA              CTGCGGC CGA ACCGCTG              GCAGCAAAAAACACT  89 439
LT978_RS12980 NONE
LT978_RS12975 2690830 .. 2690849 - -12.2  -4.64763   GCATGCAAAAAATAA            GACCCTTC CAAA GAAGGGTC             TTTATGTTATGTTTG 100 32
LT978_RS12970 2689730 .. 2689750 - -13.3  -4.46854   GTATGTAAGAAGAAA            CGGAAGCCC GGG GAGCTTCCG            TTTTCTTGATTACAG 100 35
LT978_RS12960 NONE
LT978_RS12955 2688368 .. 2688400 - -14.2   -2.6186   ATTCAATTTCAGAAG     CGGCTCGCTTGTCTG TTAT CCGACAAGCG-GCCG      AATGTGTATTATGGA  88 116
LT978_RS12940 NONE
LT978_RS12935 NONE
LT978_RS12930 NONE
LT978_RS12925 NONE
LT978_RS12920 NONE
LT978_RS12915 2684629 .. 2684672 - -16.3   -5.4505   TTTCGGAACAAAAAA GGACACCAATCAAT-GCGCA GCATG TGCGCGATTGATCAGTGTCC GCAGGCTTTCCGTCT 100 64
LT978_RS12910 2684020 .. 2684039 -  -3.5  -5.18726   TGTCTATAATAAAAA            GCGGC TTCTAATCGG GCCGC             TTTTTGTGATCGTCT  75 72
LT978_RS12905 NONE
LT978_RS12900 NONE
LT978_RS12895 NONE
LT978_RS12890 NONE
LT978_RS12885 NONE
LT978_RS12880 NONE
LT978_RS12875 NONE
LT978_RS12870 NONE
LT978_RS12865 NONE
LT978_RS12860 NONE
LT978_RS12855 NONE
LT978_RS12850 2674827 .. 2674845 - -13.2  -5.60993   TTTTTTATAAAAAAA             CAGGCCTT TAA AAGGCCTG             TTTCACTCATAATGA 100 47
LT978_RS12845 2674286 .. 2674330 -  -3.7  -3.35798   AGTTCTGATGGAGAA TAATGAAGCTCATGCATCGC GTAATA GAGATACACG-GCTTCCTTA TTCCCATCTTTTATC  49 39
LT978_RS12840 NONE
LT978_RS12835 NONE
LT978_RS12830 NONE
LT978_RS12825 NONE
LT978_RS12820 2667227 .. 2667247 -  -2.5  -2.78405   TTCATGTAAAAAAGC            CCTCTTC GGCAGAT GAAGCGG            CTTTAATAGGCTGAT  42 70
LT978_RS12815 NONE
LT978_RS12810 NONE
LT978_RS12805 2665165 .. 2665175 -  -5.4  -2.62515   AAGCGGCTGATATCA                 TGGT AAG ACCA                 CCTCGTTATTGTTGA  51 12
LT978_RS12800 NONE
LT978_RS12795 NONE
LT978_RS12790 NONE
LT978_RS12785 NONE
LT978_RS12780 NONE
LT978_RS12775 NONE
LT978_RS12770 NONE
LT978_RS12765 2660329 .. 2660361 -  -7.7  -6.04324   TTAAAAAAGAAAAAA      GGCTGAATCCCGC AATGTGA ACGGGACTCAGCT      TTTTTTTGTTAAAGC 100 34
LT978_RS12730 2654545 .. 2654571 -  -6.6  -6.31682   AAAAGCAAAAAAAAA        GATGCC-CCCG TCAAGC CGGAAGGCATC         TTTCATTACTTCTGA 100 42
LT978_RS12725 NONE
LT978_RS12720 2651247 .. 2651275 - -14.6  -4.54047   TTATTTTACATAAAA        GCACCCTGTCCG CTGGC CGGACAGGGTGT        TTGTTAAGACATATG 100 29
LT978_RS12705 2647677 .. 2647705 - -14.8  -5.06451   CATTATGGGAAAAAA        CAAACCCTTTTC ACCGG GAAAAGGGTTTG        CTGATAGAAAAAGTT 100 39
LT978_RS12700 2646716 .. 2646729 -  -2.3  -3.79687   ACGTTTGATAAAATA               CCGCA GCAA TGCCG                TTCACCCCTTTAACA  50 35
LT978_RS12695 NONE
LT978_RS12690 NONE
LT978_RS12685 NONE
LT978_RS12680 2642148 .. 2642175 - -12.8  -2.72204   TGAAAAGTGAAACAC        GCCGCTCCTTTA ACGG CAAAAGAGCGGC         ATATGTTTCCGCTGT  89 45
LT978_RS12675 NONE
LT978_RS12670 NONE
LT978_RS12665 NONE
LT978_RS12660 2638178 .. 2638205 -   -10  -4.86621   AGGTTTAATCAAAAA        GAAAGCTGAC TTTATATT GTCAGCTTTC         TTTTTTGTATAAATG  93 17
LT978_RS12645 2635456 .. 2635474 - -11.8  -5.67063   TTCAGCATAAAAAAA             CCGCTTTT AAA AAAAGCGG             TTTGACGATTACCAA 100 34
LT978_RS12640 2634687 .. 2634727 - -11.2   -5.0916   CGGGCAATACAAAAA GCCCGGAATAGTC-GTCTC ACAT GAGATTGACTCTCCCGGGC  TTTTTTCCCTCCGTG  93 136
LT978_RS12635 NONE
LT978_RS12630 2633983 .. 2633996 -  -3.9  -3.14487   GATTATACTGAAAAT               TTGAT AAAA ATCAA                TTTACGAAAGAATTT  48 27
        purU 2632996 .. 2633018 - -10.5  -5.28176   TTCATCCATAAAAAA           CAGCCCGCC TCCCC GGCGGACCG           TCATTAATTAAATAC 100 29
        proB NONE
        proA 2630266 .. 2630289 - -10.4  -5.60993   TTCCGCATAAAAAAA          GCTTACCCTT TTTG AAGGATAAGC           TTAAAAGATTATACT 100 34
LT978_RS12610 2629729 .. 2629755 - -15.3  -5.21709   CTGCACAGCAAAAAA         TAAGGATGCCC CGAAT GGGCATCCTTA         TTTTTATTCTGCTGC 100 29
LT978_RS12600 2628699 .. 2628723 -   -13  -4.63218   TTTTCGTTAATAAAA          TATCCCGGAT ATGAA ATCCGGGATA          TTCGTTCGTTTCTTT 100 39
LT978_RS12595 NONE
LT978_RS12590 NONE
LT978_RS12585 2626391 .. 2626415 -  -6.5  -5.52909   GAACATGCAAAAAAA         GGATCAGGCG TTTGTC CGC-TGATCC          TTTTTTAATTGAGAC  90 4
        yeiL 2623067 .. 2623079 -  -7.7  -5.53991   CAGGCACGAAAAAAA                CAAGC TCA GCTTG                TATAATGAAAACAGC 100 79
LT978_RS12555 2618364 .. 2618391 - -13.4  -4.82901   TTGTTTGTATAAAAA        CAGGCCGCCGGA GTGA TTCGGCAGCCTG         TTTTGTTATGTATGT 100 40
LT978_RS12535 NONE
LT978_RS12530 2613446 .. 2613474 -   -14  -4.77173   TGCCTATAAAATAAA        CGGAATAAAGGC ATAAA GCCCTTATTCCG        GCAAATCGCTTTCAT 100 18
        mgtE 2611578 .. 2611599 - -12.3  -5.14563   CCGCTGATCAAAAAA           GTCCGCCTC CTGT GAGACGGAC            TTTTTTTATAAAGCA 100 31
LT978_RS12515 2610841 .. 2610866 -  -2.7  -2.91036   TATGATCAGAATAAC         GCTTT-TATATC AAA GATGTATAAAGC         CATTGTAAAACTTCT  43 46
        fbpA 2610600 .. 2610633 -    -4  -5.71712   TTTTATATAAAAAAA     TACCCTTATACA TCATTTAATT TGTATAAGGGTT      CCGTTCTTTATAGGG  89 8
LT978_RS12505 2609971 .. 2609991 -  -9.8  -6.15717   GAAACAGAAAAAAAA            CACTCTTC ATGAA GAAGAGTG            TCTGTATCCGCTTTC 100 43
LT978_RS12500 2609259 .. 2609281 -  -9.2     -4.31   GCAAATCAAGAGAAA           GAGCTGAC GCTTTTG GTCAGCTC           TTTTCAGTCTGATAC  85 19
LT978_RS12485 2605149 .. 2605175 - -12.4  -5.08824   TTTTTACGCAAAAAA         GACCTTTGCC GATATAA GGCAAAGGTC         TTGCTAGACATGAAT 100 180
        sigI NONE
LT978_RS12470 2601853 .. 2601864 -  -2.2  -4.54727   CGTTTGAAACTAAAA                TGCG TAAA CACA                 TCTTGCCAGAGAAAA  61 255
        htpX 2599984 .. 2600005 -  -7.3  -5.63517   TCTTTAAACAAAAAA           CCTCTGAAA CGAT TGTCAGAGG            TTTTGTTTATTATTT  93 35
LT978_RS12450 2598482 .. 2598503 - -13.1  -5.80364   ACGGCAATAAAAAAA           CACCGCTTT CTGA AAAGCGGTG            TCAGCCGATAATCAT 100 26
LT978_RS12445 NONE
LT978_RS12440 2597528 .. 2597557 - -18.1  -4.39407   CGAAATAATGCAAAA       TACCTCTTAAGCG TTGC CGCTTAAGAGGTA        TTTTTTATTTTTTGC 100 30
LT978_RS12430 NONE
LT978_RS12425 NONE
LT978_RS12420 2593100 .. 2593127 -  -4.8  -4.20516   TTCCGATTGAAGAAA        GAGATCCGGATG AAGT CAGACAGATCTC         AGGCATACGCACCGC  64 217
LT978_RS12400 2588432 .. 2588456 -  -4.3   -5.9362   CAAAACATAAAAAAA          CCTCTTCCC TATGAGC AGAAAGAGG          CTTCGTGTTATGTCC  93 179
        mtnW NONE
        mtnX NONE
LT978_RS12385 2585902 .. 2585913 -  -5.8  -2.59564   CTTTTATTTTACAAG                CTGC GGCC GCAG                 TGACAGAAGCTTGAG  54 2
LT978_RS12380 2585298 .. 2585325 - -15.7  -5.58179   TATTACAATAAAAAA        CCTCTCATGCC GGCGGG GGCATGAGAGG         TTCGGGCGTCTATCA 100 38
LT978_RS12375 2584593 .. 2584609 -  -7.9  -5.55664   TCACGATGAAAAAAA              CACCCTG GGT CGGGGTG              TTTTTTATTTAAAGA 100 213
LT978_RS12365 2582398 .. 2582419 -  -8.7  -5.49569   CAGTAATATAAAAAA           GGAAGCCTT TCAA ATGGCTTCC            TTTTTTATTTCTGAT 100 30
LT978_RS12345 NONE
LT978_RS12340 2575857 .. 2575880 - -10.4  -5.88565   GTGACAATAAAAAAA          CAGCCTGA-AC CCT GTGTCAGGCTG          CAAAAGCGGGTTTAA 100 37
        queC NONE
        queD NONE
        queE NONE
        queF 2573245 .. 2573269 - -14.3  -4.84527   GGCAGAGACGAAAAA          TACCCCCGCTT AAA AGGCGGGGGTA          TTTAGGTTATAGTCC 100 62
LT978_RS12315 2572652 .. 2572667 - -10.4  -4.38154   ATATCCCGCACAAAA              GCTGCC GCCC GGCAGC               TTTTTCAAATGAATT  89 40
LT978_RS12305 2572043 .. 2572064 -  -8.7  -6.09196   GCGAAAACAAAAAAA           GACTCCTCA AGTG CGAGGAGCC            GTCAGCTTCTTGGCT 100 27
LT978_RS12300 2571138 .. 2571169 -  -9.6   -5.2696   TCAAAATTGAAAAAA      GCATAGCGGGGAT ATTTTTG ATC-CCGCTATGC      TTACATCGCAAATAC 100 26
LT978_RS12295 NONE
LT978_RS12290 2569128 .. 2569153 - -20.5  -5.13473   ATTATATGCAAAAAA         GGTGCGGGAGG AATT CCTCCCGCACC          TTTTTATTTCTCTGA 100 29
LT978_RS12285 2566972 .. 2566994 - -10.5  -5.94597   GAACATTAAAAAAAA           CAGCCGCCC GTGAT GTGCGGCTG           TCATGTTTATTTTAA 100 32
LT978_RS12280 2565736 .. 2565781 -   -15  -3.10597   TTTTTCATTTAAAAG GTGATAAAAAAGGACGCTGC GTTCCA GAACCGTCCTTTTTTATCAC AAAGCTTTCTATTTC 100 34
LT978_RS12275 NONE
LT978_RS12270 2563543 .. 2563559 -  -5.1  -4.17048   GGGTGTGCAAAATAA              CGGGA TCGTTCT TCCCG              TTTTTTACCCTCAAT  63 91
        ptsG 2561258 .. 2561285 - -16.4  -2.98986   ATATTATATCATACA        GCCGTACTTGTC ATCT GACAAGCACGGC         GTATTTATATGCTTA 100 38
LT978_RS12260 NONE
        ptsP 2559190 .. 2559211 - -12.3  -5.63374   CGAATATGAAAAAAA           CCAGACGGC TTAT ACCGTCTGG            CTGTTGTATTACTTA 100 34
LT978_RS12250 NONE
        splB 2557753 .. 2557773 -  -9.7  -5.86061   GCGCAGCAAAAAAAA            GAGCCGTCA TGC CGACAGCTC            CGCCTTACGTAAAAT 100 30
LT978_RS12240 2555637 .. 2555676 -    -3   -2.7035   GCGATTCATATATCA  CTCTTTCATGTCTATATTA CCA TATTATAGGC-TGATAGAG  ACCGCGTCACAAGGT  41 32
LT978_RS12235 2554247 .. 2554261 -  -2.8    -5.055   GGAATTCTCAAAAAA               CAACAT GTA ATGATG               AAATCTCTGAATCGA  70 500
LT978_RS12215 2550130 .. 2550162 -   -12  -3.90112   TTTTCCTGAATGAAA      GAAAGGGCGCACGA TATGT TCGGCCGCCCTTTC      ATTTGTTATTTTTTA  95 31
LT978_RS12210 2548146 .. 2548164 -   -11  -3.70149   TGCAGACTATTTAAA             CAACGGCA TAA CGCCGTTG             TTTTTTTATTGTTTC  83 31
        cheV 2545486 .. 2545506 - -12.6  -5.00616   TTCCGCCGCAAAAAA            GCCGATGC GTCAT GCATCGGC            TTTTTTCTATTCAAT 100 32
        fadH 2541121 .. 2541151 - -11.2  -5.40873   AATAGAAAAATAAAA       CAAGCGAACGGTCA CCT TTAACGTTCGCTTG       TTTTGCAAAATATGT 100 49
LT978_RS12160 2539133 .. 2539147 -  -5.6  -5.96219   CATTTATAAAAAAAA               GCGGCA TAC TGCAGC               CGCTTTAAAGTAACC 100 30
LT978_RS12155 2538418 .. 2538431 -  -4.5  -3.15757   CATAATTTAATAAAG               CTCCG CTTG CGGAA                GACCGGAAGCTTGGT  50 63
LT978_RS12150 NONE
        abbA 2537456 .. 2537478 -  -3.5   -5.4505   TCCGTCAATAAAAAA           GATACTC TTTGCAATC GAGTATC           AATTTATAGGCCGCT  78 43
LT978_RS12140 2536884 .. 2536918 -  -5.9  -3.59979   TTCTGGCATGCGAAA     GAACAAATAGGCT GATCGTGCG AGCCTACTTATTC     AATGATCTGATATGA  62 16
        ccpC 2535866 .. 2535883 -  -9.9  -6.28401   TAAAAAATAAAAAAA             GACAGCA TGAT TGCTGTC              TTTCTAAAATGGGCG 100 29
LT978_RS12130 NONE
LT978_RS12125 NONE
LT978_RS12120 2533913 .. 2533928 -  -2.6  -4.12868   AGACAAGAAAAAAAG              GAACAA GCCT TTATTC               TGCCGGCTGGCTGCA  55 20
        dapD 2533088 .. 2533111 - -12.5  -4.06864   TTGAGATAAGAATAA          GGCGTGGAT TTTATC ATCCACGCC           CATTCTATCAAACCA 100 45
LT978_RS12110 NONE
LT978_RS12105 2531602 .. 2531619 - -11.3   -5.0916   CGCCGAATAGAAAAA             CCGAAGC GTAA GCTTCGG              TTTTTTCTTTTTAAT  93 36
LT978_RS12095 2529980 .. 2530002 -  -4.9  -5.65177   ATAGTCACAAAAAAA          CCCTGTTACC TAAC GGCAA-AGGG           TTTGCAGAACCGAGA  85 67
LT978_RS12090 2528964 .. 2528984 -  -9.7  -5.61824   GAAAACGCAAAAAAA            CTGCTTGAG TAA CGCAAGCAG            TTTTTACTGTTTTAT 100 37
LT978_RS12080 NONE
LT978_RS12075 NONE
LT978_RS12070 NONE
        mobB NONE
LT978_RS12060 NONE
        moaD 2523635 .. 2523665 - -14.1  -5.03994   GCCTATATACAAAAA      GAGCCGGATG-GCA ATGA TGCACACCCGGCTC       TTTTTTCACCCTCCG 100 31
LT978_RS12050 NONE
LT978_RS12045 NONE
LT978_RS12040 NONE
LT978_RS12035 2519601 .. 2519621 - -15.5  -5.63645   TTAAAACACAAAAAA            CCCCATGCA GAC TGCATGGGG            CGCCGGTTATTCATA 100 32
LT978_RS12030 NONE
        pfkB NONE
LT978_RS12020 2515740 .. 2515756 -  -7.2  -5.11613   ATATGATTGAAAAAA              GCGCCC GTAAA GGACGC              TTTTCGCTTATTTCT  85 33
        lepB 2515019 .. 2515048 -  -9.9  -5.27335   TTTGCCAAATAAAAA       CGCC-TGCTGTCCG AAT CGGGCAGCGCGGCG       TTTTTATTTTGTCTG 100 29
LT978_RS12005 2512941 .. 2512956 -  -6.8  -5.72622   TTCATAAATAAAAAA              GCAGAG TCTC CCCTGC               TTCTTTATTACGCGT 100 33
LT978_RS12000 2511922 .. 2511939 -  -8.4  -5.80364   ATTTTAATAAAAAAA             GGAGGC GATCAG GCCTCC              TTTTTATTTCGCTTC 100 29
LT978_RS11980 2508783 .. 2508803 -  -4.6  -4.78839   AAGTTCATAATAAAA            GGACGGAA TGATG CCCCGCCC            TTTTTGCTGATTATG  71 36
LT978_RS11975 NONE
LT978_RS11970 NONE
        ktrC 2505780 .. 2505797 -  -8.4  -4.03793   TGACATAATAAAAGA             CCGTCC TTTTAC GGACGG              CTTTTCACTTTGTAT  79 30
         ade 2503894 .. 2503914 - -11.9  -5.42259   GGAGGTCTAAAAAAA            CTGCACTCA TTA CGAGTGCAG            TTTTTTTATTGCAGC 100 31
LT978_RS11945 2500850 .. 2500871 - -14.5  -4.64676   TGACCGTTAAGAAAA           CCGGCACTT CCCA AAGTGCCGG            TTTTCTTTATTTCAA 100 32
LT978_RS11930 2498800 .. 2498818 -  -6.1  -6.11229   AGCAAAATAAAAAAA             CCTTTAT GCCGG ATAAAGG             TTTAAAAGCAAAAAG 100 326
        fabD NONE
LT978_RS11920 NONE
LT978_RS11915 NONE
LT978_RS11910 NONE
LT978_RS11905 NONE
LT978_RS11900 NONE
LT978_RS11895 2450428 .. 2450454 - -14.6  -4.13995   CTTTTACAAAGTAAA         GAAACAGAGCAG GTG CTACTCTGTTTC         ATCAATAATTTCAAG 100 14
LT978_RS11890 NONE
LT978_RS11885 2445372 .. 2445400 - -21.1  -3.18383   ACGGGCAGTTAGCAA        TCGTCCCGCCTGC CGG ACAGGCGGGACGA        TGCTTTTGTCTAATT 100 39
        pdhA NONE
        pdhB 2442808 .. 2442822 -  -2.1  -3.40522   ACTCCTTCATCATAA               GAGAA AAGGA CTCTC               TTTACCGTCTTTTAT  46 50
        pdhC NONE
        lpdA 2439933 .. 2439960 - -17.8  -5.18726   CTTGCACAATAAAAA        CAGCCCCCGCTT TTAT AAACGGGGGCTG         TTTCTTTGTTACATC 100 42
LT978_RS11855 NONE
LT978_RS11850 2438241 .. 2438270 - -12.9  -4.46072   TCCAATAAACATAAA       GAAGCCCGAAACG AAAT CGTTTCGGGCCTT        TTTTACGCTTTTTAC 100 37
LT978_RS11840 2436287 .. 2436307 - -10.3   -5.1523   CTCATAACATAAAAA            GCGGGCCGA TTG CCGGCTCGC            TTTTGTCTACATTTT  93 32
LT978_RS11830 2435188 .. 2435208 -  -4.7  -4.65895   CTTCTCACGTAAAAA            CGAACCA TTTCCTG CGGTTCG            TTTTTACTATTCTTT  70 39
        suhB NONE
LT978_RS11820 2433806 .. 2433837 - -14.6  -3.90744   TCGGCTTGTAAACAA      GAAAAGAGACCGGA GAAA TCCGGTCTCTTTTT       TATATCTGAACATTT 100 40
LT978_RS11810 NONE
LT978_RS11805 2431413 .. 2431439 -  -8.1  -4.51799   AGTAAACGGATAAAA        CGCCCGG-T-CAT GTC ATGCAGCCGGGCG        TTTTTTTAAATCAGC  83 31
        typA NONE
LT978_RS11785 2427913 .. 2427970 - -21.2  -5.24449   GATAAACTGAAAAAA TAAACCGCAATAAAA-AATGACC-CGCC GGAA GGCAAGGTCATTTTTTTATTGCGGTTTA GCTGACTGGCTTTTT 100 13
LT978_RS11770 2425316 .. 2425331 -  -3.2  -4.44046   CCGAGCCGAAAGAAA              GCGC TGTCCTGT GCGC               ATTTATTTCAAAATC  63 192
        glsA NONE
LT978_RS11755 2423552 .. 2423581 -  -5.1  -5.52909   GAAGATGCAAAAAAA       CGGTTTACGGTTAT AAA AAAACC-CAAACCG       TTGAATAGTTTGAGT  85 49
LT978_RS11750 2422200 .. 2422211 -  -2.2  -3.05022   TTTTTTAGAGATACA                CAGA TTTT TCCG                 TCTGCCGTCTTTTTA  42 3
         pyc 2418617 .. 2418656 -   -16  -2.87132   CGGCCTTTTTACATA  TAACAAACCTGAT-CGCAC ACG GGGCGGATCAGGTTTGTTA  TGTTTATTTTTTACG 100 36
        cyoE 2416214 .. 2416228 -  -4.2  -3.86944   TGCACAAGCAGTAAA               TCTGCT TCC AGCCGA               AATACTTCATTTCCT  57 180
        coxB NONE
        ctaD NONE
        ctaE NONE
        ctaF NONE
        ctaG 2411302 .. 2411322 -  -9.8  -5.52096   AAATGTAATAAAAAA            GTACAGCA TATTC TGCTGTAC            TTTTTTTATGAGACG 100 31
LT978_RS11700 NONE
LT978_RS11695 2409197 .. 2409221 -  -5.7   -5.9667   AAAAACATAAAAAAA         CCGC-G-GGGG ACGCG CCCCTCTGCGG         TTTTTTACTGCCAAG 100 30
LT978_RS11690 NONE
LT978_RS11685 2408332 .. 2408345 -  -2.3  -2.79116   TGCATACATAAATAC               GCACC TCCA GTTGC                TAGTTTACCATGAAA  41 76
LT978_RS11680 2407858 .. 2407877 - -12.2   -4.1899   TCATTTTATGTAAAA            GACGAGAC GGCC GTCTCGTC             AGGAAACTTTGCATC  95 24
LT978_RS11675 2407519 .. 2407538 -   -15  -2.96822   TAAGGAATAGAAGGA            CCCCGCAG GTAT CTGCGGGG             ATTTTTTTATATACC 100 32
LT978_RS11670 NONE
        rsmD NONE
        coaD 2406180 .. 2406209 -  -7.9  -5.64274   GCACGGACAAAAAAA       GGATGAGACGC CGATCAGC GCTTCTCATCC        TTTAAATTTCTGCTT 100 20
LT978_RS11650 NONE
LT978_RS11645 2402959 .. 2402979 -  -8.3  -5.43866   GAATGCGTAAAAAAA            GCACCTG CCTGTAT CAGGTGC            TTTTTACTTTCAGCT 100 18
LT978_RS11635 NONE
        rpmF 2400736 .. 2400769 - -16.9  -5.96219   GAGGGACAAAAAAAA     GAAAAGCGCAGGAAC CGAG ATTCCCGCGCTTTTC      TTCATACATTAATTG 100 34
        gerR 2400012 .. 2400038 -  -3.7  -5.55769   CGGCATAATAAAAAA        CCGGCC-G-GG CTGCCGC CCTCAGGCCGG        TTCATTTTACAGGCT  83 32
LT978_RS11615 NONE
        bshC 2396738 .. 2396754 - -10.9  -6.32216   ACACATAAAAAAAAA              CCCTGAA CTA TTCAGGG              TTCTTTAAAACTTTA 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
        pbpB 2392634 .. 2392659 - -16.9  -5.24129   GCGGCGCATAAAAAA         GAAGCCCGCGG GCAT CCGCGGACTTC          TCTGTCCCGTTAATC 100 35
LT978_RS11585 2390602 .. 2390625 - -13.9  -4.46212   CTCTTTATGATAAAA          GGCAGCCGA AAACAA TCGGCTGCC           TCAAAAAGACTCATT 100 36
LT978_RS11580 NONE
        mraY NONE
        murD NONE
       spoVE 2385286 .. 2385305 -    -5  -3.41393   ATCACATAGCGATAA            CCCTGT TTTTTAGG ACAGGG             TTATTGATGTTGTCT  56 91
        murG NONE
        murB 2383151 .. 2383176 -   -12  -4.65895   CGTCTGATTGAAAAA         CAAACGGCAT GCTGTG ATGCCGTTTG          ACATTTGTTAAAAGT 100 75
LT978_RS11550 2382292 .. 2382307 -  -6.2  -3.09732   GAATCACCTTAAAAT              TAGTTC TTTA GAACTA               TTAATCATTTTCTTT  57 26
        ftsA NONE
        ftsZ 2379228 .. 2379251 - -11.8   -5.8096   CACAAAAAAGAAAAA          GGACAAAACC ATGT GGTCTTGTCC           TTTTTTACATCAGCC 100 35
LT978_RS11535 2374661 .. 2374683 -  -6.2  -5.26875   CCTTCAACTAAAAAA           GTGCTGCC GTGATTT GGCAGCGC           TCTGTTTTTACTCAT  84 33
     spoIIGA NONE
        sigE NONE
        sigG 2371814 .. 2371836 - -13.6  -5.15634   CATCGCATGAAAAAA           GCCTTTAAAC AAG GTTTAAAGGC           TTTTTCCGTTATTGA 100 34
LT978_RS11515 2370768 .. 2370791 -   -14  -5.14563   GGCTGTATCAAAAAA          CCCGTTTCAT TAAA ATGAAACGGG           TAAAAAACGGATCTT 100 153
LT978_RS11510 2369438 .. 2369448 -  -2.4  -3.29471   TTCCTATTATATGAA                 CGGC CGG GCTG                 AACCTTGTCACATCG  45 33
LT978_RS11505 2369137 .. 2369156 -  -7.1   -3.9941   CTTTTTACAAGTAAA            GGGAGGA TTACGC TCCCCCC             TTTGGTTCATTTACA  72 13
        pgeF NONE
LT978_RS11495 NONE
        sepF NONE
LT978_RS11485 2366678 .. 2366697 - -13.6  -3.40597   CTTTCTATGTAAAGA            GGCTTGGC TGGT GCCAAGCC             CGTATCAAACTGTCG 100 44
LT978_RS11480 2365871 .. 2365895 -  -2.1  -5.65177   AGATGGAGAAAAAAA          CTGAAAAAACG ACT CATTTTTGCCG          TTCAAATGTAACTTT  79 14
      divIVA 2364992 .. 2365021 - -12.9  -6.14618   CAGAAAATAAAAAAA       GCCCTCTCATCCC ATAA GGGACGAGAAAGC        TTATCTCGCGGTACC 100 299
        ileS 2362155 .. 2362176 - -15.1  -5.08824   CTGGCATGTAAAAAA           GCGCCCGGC TGAC ACCGGGCGC            TTTCTCATTTATTAT 100 37
LT978_RS11465 2361658 .. 2361684 - -10.2    -4.053   ATGAGCGTATACAAA         CAGACGCTGT CACTCAT ACAGCGCCTG         ATCATATGCATAATC  85 8
        lspA NONE
LT978_RS11455 2360037 .. 2360061 -  -8.6  -5.68489   TATAAGAAGAAAAAA         CCCCTCC-TGC CAGA GCATAGAGGGG          TTCCTTTCCAGGACC 100 152
        pyrR 2359341 .. 2359365 - -10.1  -5.63504   AATGGTATAAAAAAA          CCTCTTTGC TTTTTGC GCAAAGAGG          CATACAAAGCCCGGC 100 114
        pyrP 2357887 .. 2357911 - -12.2  -5.03145   GAAGGCCGTAAAAAA         CACCCCG-GTC TATA GACTCGGGGTG          CGGTTAAAGAGAGAA 100 103
LT978_RS11440 NONE
LT978_RS11435 NONE
LT978_RS11430 NONE
        carB NONE
LT978_RS11420 NONE
LT978_RS11415 NONE
        pyrF NONE
        pyrE 2348107 .. 2348129 -  -9.2  -5.36441   TTTTCATATAAAAAA           CTTTCAATCC AGC GGAATGAAAG           ACAGTGACCCGGTAT 100 249
LT978_RS11400 NONE
LT978_RS11395 2346189 .. 2346201 -  -2.7  -2.71712   CGTGCGGTGCTAAAC                TCATA ATA CATGA                TTCCTCCCAGTTAAC  41 65
         sat NONE
        cysC 2344351 .. 2344364 -  -5.9  -3.30635   GAAATCTTCCCAGAA               CAGCC GCGA GGCCG                CACTTCAGCTATTTT  58 98
        cobA NONE
LT978_RS11375 NONE
LT978_RS11370 2342254 .. 2342279 - -15.5  -5.34555   GGACAGTATAAAAAA         CACCCTGCCTG ATGA CAGACAGGGTG          TTTTTTATGGTCTTC 100 30
LT978_RS11360 2337318 .. 2337340 -  -8.5  -5.13722   GTTATCAAAATAAAA           GGGCAATAG ACATG CTATTACCC           CTAAGATTATATCAT  91 47
LT978_RS11355 2336351 .. 2336362 -    -3  -4.07568   GTTCCCCCTGTAAAA                TAGA CGTC TCTA                 GTGTAACCTGAAGAG  55 68
        remA NONE
         gmk NONE
        rpoZ 2335192 .. 2335219 -  -7.9  -5.58209   CCAAACGGAAAAAAA        TAACAACCTAT GTAGAG ATAGGTTGCTA         CGTGTGCTTGTTATT 100 36
       coaBC NONE
        priA 2331505 .. 2331519 -    -5  -4.56597   TTTGCCCTCCAAAAA               CTAATG TTA CATCAG               CATGTACGGATTCAT  70 17
         def NONE
         fmt NONE
        rsmB NONE
        rlmN NONE
LT978_RS11305 NONE
        pknB 2324888 .. 2324903 -  -3.2  -2.57881   TAACGCTTTTATAAT              TTTGCC CTCA GGCATA               GGGTCCCTCCTTATC  43 39
        rsgA NONE
         rpe 2323320 .. 2323343 -  -6.7  -4.16943   TCTTAGACGCGAAAA          GAG-CCGGCG GCTTT CACCGGGCTC          TTTTTCAGCATGTTT  71 39
LT978_RS11285 NONE
       spoVM 2322414 .. 2322438 -   -10  -3.89085   ATAAGCAAAAATGAA          CGCCTGCC CTTTTATGC GGCAGGCG          TTTTTTATGCGTTCA  83 67
LT978_RS11270 NONE
LT978_RS11265 2319878 .. 2319922 - -11.5  -4.46112   CCGCAGGTAAATAAA GGCATAAGAATAGAAGGGCCT GAT AAGCCCTTCTATTCTGCCGCA AATATATATGGATAC 100 13
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG 2312730 .. 2312742 -  -3.4  -5.00616   TTCGTTTTTAAAAAA                CTAG AGAAA CTAG                GGTGAAATTTTAAAA  69 49
        acpP 2312415 .. 2312434 -  -8.5  -3.64682   GATTAAAGGGCTAAA            GCCCCGC TGTCAG GCGGGAC             TTTTAGCATCAGCTT  73 39
        rncS 2311536 .. 2311557 -    -8  -3.75535   GCAGACATACTGAAA           TCCCCCTA GGGATA CAGGGGGA            TTTTATTGTTTCGTA  72 28
         smc NONE
        ftsY 2306849 .. 2306877 -  -9.8  -5.61596   ATGCGTATAAAAAAA        CGAGTATAAAAC CGTCC ATTTTATACTCG        TTTTTTATTCATTAA 100 37
LT978_RS11205 NONE
LT978_RS11200 NONE
         ffh 2304205 .. 2304225 -    -4  -3.61398   GTTTTTTCTTAACAA            CGGTTTTA TCATG TATAACCG            ATTACATAAAAGGTA  53 27
        rpsP NONE
LT978_RS11185 2303578 .. 2303598 -  -3.9  -5.42259   TTACGTGTAAAAAAA            GGGGAGG TGCCGGC CCTCTCC            CTTTTTCAGTCAAAT  79 31
LT978_RS11180 NONE
        rimM NONE
        trmD 2301813 .. 2301824 -  -2.2  -3.50853   GCTTCTGAAGGATAA                GCCT CCTT AAGC                 CACAAGTAGTATCTT  46 71
        rplS 2301342 .. 2301365 - -10.4  -5.71712   TTTCATATAAAAAAA          GAGCCTGTTA CGGG TAACAAGCTC           TTTTCGTTCGTTATC 100 42
        ylqF 2300366 .. 2300393 - -11.4  -5.00884   ATTCTGCGGAAAAAA        TAAAGACCCGCA TCGC TGCGCGTCTTTA         TTCTGATGGTGCTTC 100 23
LT978_RS11155 NONE
LT978_RS11150 NONE
LT978_RS11145 NONE
        sucC NONE
        sucD 2295257 .. 2295283 - -16.6  -4.72272   TTTTTTCAGCAAAAA         CAGGAACAGCCG TTA CGGCTGCCCCTG         CTTCGATCAGTGCGT 100 32
        dprA 2294305 .. 2294323 -  -6.8  -3.57908   TATTAAATATTACAA             TACCGTTT GTC AAACGATA             TTTCAAAAGGGTTCC  65 28
        topA 2292046 .. 2292067 - -10.9  -4.14627   CTTCCACACAAAGAA           GGTGAGCAA GGCT CTGCTCACC            GCTACTTCTGTGGTT  86 27
       trmFO 2290674 .. 2290688 -  -4.2  -3.55219   AATGGTATCATATAA               TGCATC GAA GTTGCA               ATGAAAAGCTATATC  55 34
        xerC 2289697 .. 2289707 -  -3.2  -2.72761   GAAAAGATGACATGA                 GAAG GGC CTCC                 TTTTAATTTTCTTTA  44 28
        hslV NONE
        hslU NONE
        codY 2286877 .. 2286904 -   -12  -5.60993   TTGTCCATAAAAAAA        GCAGGACCCCCA TTTT CAGGGATCCTGC         TTTTGTCTTAATGAG 100 33
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 2282707 .. 2282721 -    -5  -2.69964   TGTTTAATGATATTA               GACAAT AAT ATCGTC               TCCTCCGCCTCGCGC  49 8
        fliH NONE
        fliI NONE
        fliJ NONE
LT978_RS11055 NONE
LT978_RS11050 NONE
        flgD 2277760 .. 2277770 -  -2.4   -2.7976   CGTAACATGTTAAAT                 TCCC CCT GGGT                 TTCTTTTTATTTAGA  41 32
        flgG 2276950 .. 2276962 -  -6.9   -3.3344   ATGCAATCCGGAGAA                GCGGC CTA ACCGC                CTCTCCTCCCTCCTT  64 39
LT978_RS11035 NONE
        fliL NONE
        fliM NONE
        fliY NONE
        cheY NONE
        fliZ NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF NONE
LT978_RS10975 NONE
LT978_RS10970 NONE
        cheA NONE
        cheW NONE
        cheC NONE
        cheD NONE
        sigD NONE
LT978_RS10940 2260132 .. 2260144 -  -4.8  -3.28924   CATTTTTGTGCAGAA                CTGC CGTTT GCAG                CACCCTCTGCATAAA  54 98
        rpsB 2259293 .. 2259321 - -12.6  -5.00616   TTTTTCTTGAAAAAA        GGTGATAAAAGG CAGTC CCTCTTATCACC        TTTTGATTAGGTTAC 100 37
         tsf 2258283 .. 2258307 - -10.8  -4.61633   ATATAGTTTTAAAAA          TAGGGAACAC AAGTA GTGTCCCCTA          TACTGCCTGAAAAGC  90 70
        pyrH NONE
         frr 2256861 .. 2256897 -  -2.4  -3.29038   AATCAACAGTATTAA    CAAAAAAACCCCCT GTAAACATG AGAGGGTCTTTTCA    CATTATCTATTGTAC  45 52
LT978_RS10915 NONE
LT978_RS10910 2255208 .. 2255227 -  -3.6  -2.62983   CTTATTTTCATATTA            GCCTTTCT CATG AAAAAAGC             GCAAGCAGAAAGTAT  45 13
         dxr NONE
        rseP NONE
        proS 2250555 .. 2250569 -  -9.2  -3.69216   TGCTGATTCAAAAGA               GCCACC ATC GGCGGC               GAGGTTCCTTCAAGC  78 463
        rimP NONE
        nusA NONE
        rulR NONE
LT978_RS10870 NONE
        infB NONE
LT978_RS10860 NONE
        rbfA 2241273 .. 2241309 - -15.3  -2.74784   ATCCCGTAAAACGCA    GAAAAGAGGACAGACGA CAC TCGCCCATCCTCTTTCC    CATTATTCAGACGGT 100 28
        truB NONE
        ribF NONE
        rpsO 2238878 .. 2238893 - -10.4  -5.36965   TAATACGATAAAAAA              GCGGGA ATCC TCCCGC               TTTTTACGATTATCG 100 35
         pnp 2236568 .. 2236589 -  -8.7  -4.64861   CTTTCTCAAAATAAA           GAAGCC-GGG TCT CCCAGGCTCC           TTGTTAGGTTTTCAT  86 41
LT978_RS10830 2235519 .. 2235532 -  -8.1  -3.40597   CCTCCTATTCAAAGA               CAGGC AACT GCCTG                CTACTTCATCAGCCT  71 26
LT978_RS10825 2234226 .. 2234250 -  -5.6  -6.15828   GGGAGCAAAAAAAAA          TGCCTGCCCC GTACA GAGGCAGACT          GCTTTGCAGCTTAAG 100 36
LT978_RS10820 2233882 .. 2233904 - -14.9  -5.60993   TTTTTCATAAAAAAA           GCACCGGCT GTATG AGCCGGTGC           TTGCAAAAAATGAAT 100 46
        dpaA NONE
        dpaB 2232229 .. 2232241 -  -3.4  -3.34902   TTTTACCATAGAATA                GTCA CGGAT TGAC                CGAATTTTTTTATTC  48 69
         asd 2231051 .. 2231084 - -15.5  -3.06302   ATTAGTCTGACGTAA     CAGAAGAGAGC-AGGC AGA GCCTTACTCTCTTCTG     TTCGCCTATAGAAAA 100 51
        dapG NONE
        dapA 2228848 .. 2228880 -  -4.1  -4.56961   AATATGTATACAAAA      CGGTCAAACTCAC GATAAAA ATGAGAATGACCG      CGTATTTCAACTGTA  66 52
        rnjB 2227025 .. 2227055 - -17.7  -5.16841   GGACATGAACAAAAA       CAAAGCCGGAGCA TCATG CGCTCCGGCTTTG       TAACATTATACTTCC 100 31
LT978_RS10785 2226206 .. 2226222 -  -3.7  -3.90318   GCATGACGGTATAAA              GGATCAT TGA ATCATCC              TTCCTTCCTCGCCCT  57 12
LT978_RS10780 2225921 .. 2225939 -  -7.4  -4.74215   ACATCATGAAGAAAA             GCAGCC TTTTGCC GGCTGC             ATTTTTCTGTAGGAT  81 89
LT978_RS10775 2223497 .. 2223519 - -11.4  -4.18494   CATTTTCAGTGAAAA           CTCTCTCCTT TTT AAGAAGAGAG           CTCATCATATTGTTC  90 14
LT978_RS10770 2222637 .. 2222655 -  -7.4  -5.95539   CGGCAAATAAAAAAA             CAGACACA TGA CGCGTCTG             TCTTAAAAACGTTTT 100 28
LT978_RS10765 2221306 .. 2221326 -  -8.3  -6.17669   AATAAAATAAAAAAA            GACAGTGCA GAT TACACCGTC            TTTAATGATTCCTTT 100 16
LT978_RS10760 NONE
LT978_RS10755 2217603 .. 2217626 - -14.6  -5.72053   TAAGGAAACAAAAAA          CCTCTGCCCG AAAA CAGGCAGAGG           CATTGAACGTTATTT 100 35
LT978_RS10750 NONE
LT978_RS10745 2214893 .. 2214915 - -12.1  -4.82901   CTTTCCCCAGAAAAA           CATCCCTCA GGGCG TGAGGGATG           TTTTGTTATGATTTT 100 31
LT978_RS10740 NONE
LT978_RS10735 2213781 .. 2213800 -  -7.8   -5.9362   GAAAACATAAAAAAA            GAGAGGAG AAAT CCCCCCTC             TTAATGAGTGCTGTT 100 26
LT978_RS10730 2212889 .. 2212899 -    -4  -4.87626   TTCCAATATTAAAAA                 TCAA AGC TTGA                 AAAACCGGTCTGGTC  71 8
LT978_RS10725 2211930 .. 2211952 -  -7.8  -5.08601   GGACGTGAAGAAAAA           GTCATCTTAA TCG TTCAGATGAC           TTTTTCCCCTTTTAT  89 37
        pgsA NONE
LT978_RS10715 2209940 .. 2209972 -  -2.7   -5.4505   TTTGCCAAGAAAAAA      GCGAACGCATA TTCGGATTTTT TCCGCGTTCGC      TTTTCTGCAAAAGAG  76 93
        recA 2208788 .. 2208811 -  -8.2  -6.08563   AACATACAAAAAAAA          GAGCGGAA ATTGCTTA TTCCGCTC           TTTTGATCGTGTTTT 100 40
LT978_RS10705 2207270 .. 2207305 -  -8.4  -2.80895   CTCAACATACAGAAC    CTTCACA-GGGAATGAG TCT CTCATGCCCTTGTCAAG    TTTAAATGGTTTAAC  66 196
         rny 2205600 .. 2205626 - -12.5  -5.47821   AGGGACTCAAAAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTGCATACTCTAC 100 23
LT978_RS10695 2204602 .. 2204623 -  -5.9  -2.66711   TTTACAATGGATAAG           TGAGTGTTC ATTA GAACAATCA            TTATTAGATGTTGCT  54 171
       spoVS 2204259 .. 2204287 - -15.4  -5.16841   TGACAGCAATAAAAA        CAACCTGCTCGC CTTAC GCAAGCAGGTTG        AGAATGTACATGTTT 100 47
         tdh NONE
LT978_RS10680 2201794 .. 2201811 -  -7.7  -5.82036   ATAAGAAATAAAAAA             GAGGGAA TCAT TTCCCCC              TTACACAAGCTGAAG 100 26
        miaB NONE
LT978_RS10670 2199682 .. 2199704 -    -7  -5.66989   TAAACAGCAAAAAAA          CAC-GGGCC GATGAA GGCCCCGTG           TTTAAATAGAACAGC  93 27
        cotE 2198873 .. 2198903 - -11.8   -5.4251   TTTATATATAAAAAA       GAGACTCGGGGTGT TAA ACTCCCCTAGCCTC       AACTTATTCTTCAGG 100 29
        mutS NONE
        mutL 2193917 .. 2193939 - -14.2  -3.35072   AAGAACTAAATGTAA           GGGGGACTAA TTA CTAGTCCCCC           TTGACTAACTTGCGG 100 396
LT978_RS10645 2191801 .. 2191819 -  -7.4  -3.68962   TTGGAATAGATATAA             GCAGAATG TCC CATTCAGC             CTGCCCGGCGCTTTT  67 159
        fabD 2190612 .. 2190640 -  -2.5   -2.8733   CTGTCCAGAAAACAT        GAAAACAATTG GCTGGTT CATTTGTTCTC        CTTTTTGCTCTTTAT  42 154
LT978_RS10635 NONE
        fabD 2187422 .. 2187435 -  -5.3  -3.01712   TTCGTCTTGTCAACA               CGTTT GCAG AAACG                AGCCTAACTTCTGAT  53 6
LT978_RS10625 NONE
LT978_RS10620 NONE
LT978_RS10615 NONE
LT978_RS10610 NONE
LT978_RS10605 NONE
LT978_RS10600 NONE
LT978_RS10595 NONE
LT978_RS10590 NONE
LT978_RS10585 2121490 .. 2121511 - -11.5  -5.00616   CTGTTTGTGAAAAAA           GCGGCCGGA TTGC TCCGGCCGT            TCTCTATTACCGTTT 100 32
LT978_RS10575 2119431 .. 2119446 - -10.4  -5.75599   CAAAGCATAAAAAAA              CTCCGG CGAA CCGGAG               AAGTTACTGAACGAT 100 29
LT978_RS10570 2118612 .. 2118629 -  -7.7  -6.01725   AATAAAAAGAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTTATTGGTTT 100 31
LT978_RS10555 2116249 .. 2116261 -  -4.7  -6.09133   GAGGGCAAAAAAAAA                GGGAG GAA CGCCC                GAATTTTCAGGGGCG 100 69
LT978_RS10550 NONE
LT978_RS10545 2114797 .. 2114823 - -11.6  -5.91981   AAAAGCTAAAAAAAA         TCAAACGGCCCG GAG CTGACCGTTTGA         ACTCGTCAAGCTCGG 100 31
LT978_RS10525 NONE
        miaA NONE
         hfq 2111886 .. 2111902 -  -6.6   -4.9725   ACGCGCATAGAAAAA              GACCAT TGTTC ATGGTC              TTTGTCAAAAAGTCT  81 39
LT978_RS10510 NONE
LT978_RS10505 2111143 .. 2111174 -  -8.8  -4.15235   AACGCCCAAAAAAGA      GAGCAGAACGAGAA TCAT CTCTCATCCTACTC       AAGGTGTCATGTGTA  79 97
        nrdI NONE
        nrdE NONE
        nrdF 2107516 .. 2107536 - -12.7  -4.28774   CCACTCAAGCCAAAA            GAGCAGATA TTA TATCTGCTC            TTCATCTTGGCCAAA 100 14
LT978_RS10485 2106816 .. 2106848 -  -7.7  -5.40004   GACTAAATGAAAAAA     CCCCTGCTC-TCCC TTTTTT GGGACGAACGGGGG      TTTTTTGTTATTGAA 100 33
       spoVK 2104747 .. 2104775 -  -9.6  -5.76237   GAGAGAAATAAAAAA        GAGACCCCTCAG ACCGG CTGAGAGGTCTA        TTCGTGAGCTGCCGC 100 23
        hflX NONE
LT978_RS10465 2102072 .. 2102084 -  -4.9  -3.11178   TAAGGAATCTTAACA                TCAAA TTC TTTGA                AAATTGCAAACGCCC  52 40
LT978_RS10460 2101565 .. 2101577 -  -3.4  -2.98356   AGGTAAATGTATATA                GCAA AACAG TTGC                TAACGGATTAATGAA  45 33
        glnA 2100158 .. 2100184 - -11.6   -5.2696   CCAAAACTTAAAAAA         TCCCCTGACACC AAT AGTGCCAAGGGA         TTGAGAGATTAATAC 100 34
LT978_RS10445 NONE
        xynB 2095044 .. 2095056 -  -2.7  -3.51924   TTCCCACCTAGACAA                TAGCT ATG AACTA                TTACCATCTTTCTTA  49 275
        xylA 2092292 .. 2092325 -  -9.7  -3.53563   AGATCCCCGTTGAAA     TGACCCGCCATAACAG TAA CT-TCATGACGGGCCA     TTCCGGGAACTTGGC  79 88
        xylB 2090436 .. 2090461 -  -9.8  -5.64873   CTCAATAATAAAAAA         CATCCCC-CAC GCAAT GTGAGGGGATG         TTTTGTGTGTATACT 100 317
        ppsA 2087495 .. 2087521 -  -3.7  -5.71712   TTTCACATAAAAAAA        CCGGATTCCTCT TCTA AAAGGT-TCCGG         CTTTTCTTTTTGTTC  89 95
LT978_RS10405 2085385 .. 2085399 -  -4.2  -3.60906   AAGTAAACGAAAAAT               GATCCC TTT GGTATC               CCTCAGTTCTTTATC  55 133
LT978_RS10400 2083995 .. 2084022 -  -7.9  -5.67063   GTGATTATAAAAAAA        GATATATGACA GCAGAT TGTCATACATC         TTTATAAATTTTCAT 100 17
LT978_RS10395 2083307 .. 2083331 -   -10  -3.27298   CTTCCTAATCATTAA          GGCTGCCG GGAATGATA CGGCAGCC          TTTGATCTCTATTCT  78 144
LT978_RS10385 NONE
LT978_RS10380 NONE
LT978_RS10375 NONE
LT978_RS10370 2079106 .. 2079124 -  -3.2  -3.10175   ACCTTTGAAAAGAAC             TTCTTC GTTTGTT GAAGAA             CTTATCACAATCTAT  46 182
LT978_RS10365 2078465 .. 2078479 -   -10  -5.88197   CTAAATACAAAAAAA               CCTGCT TTC AGCAGG               TTTTTTTCGGTAAAG 100 67
LT978_RS10360 2077224 .. 2077246 -    -7  -3.69395   CGGACTAGGCAAGAA           CAAAGCCG GCACAAG CGGCTTCG           AATTCATGTGTTCGT  67 45
LT978_RS10355 NONE
LT978_RS10350 2075090 .. 2075116 -  -8.1   -5.1166   CATTAAAACTAAAAA        GATCGGCCG-AT GAAC ATGCAGCCGATC         AGTAATTCATAGATT  91 39
LT978_RS10325 2069659 .. 2069676 -  -9.9  -5.93809   TCTCCATAAAAAAAA             GACTGCT GTTA AGCAGTC              TTTTTTCGTTTTATT 100 36
LT978_RS10320 2068578 .. 2068589 -    -3  -4.36914   GCCCCGCCGACAAAA                TAAG CGTG CTTA                 TTAATAATTGTCACT  60 26
LT978_RS10315 NONE
LT978_RS10310 2067491 .. 2067506 - -10.4  -5.41787   GAAAAAACATAAAAA              GGAGGC AATC GCCTCC               TTCTCTTTTTACTTT 100 34
LT978_RS10300 2066440 .. 2066457 -  -4.8  -5.77988   ATAGATATAAAAAAA             CCCGCT GCCTTT AGCGAG              TATCTATTTTCAATC  93 35
        yneA NONE
LT978_RS10285 2064310 .. 2064322 -  -4.7  -3.94823   TAGAAATCATAATAA                GCTCC TTT GGTGC                GTGTTGATTATATAC  61 76
LT978_RS10280 2064044 .. 2064063 -  -6.5  -5.24989   GTATATACGAAAAAA            GAATACG TATTGC CGTATTC             TTTCTGTTTAGTGAA  88 33
         tkt 2061869 .. 2061890 -  -8.8  -4.96106   CATAAACAGGAAAAA           GAGGATGA TTTGAC TCATCCTC            TTTTGTCTCGTTATT  91 36
        sirA NONE
LT978_RS10265 2060934 .. 2060958 - -10.2  -4.16681   AACATGACGCCAAAA          TAAAAAACCC TCTCC GGGTTTTTTA          TTTTTATAACCATGT  85 66
LT978_RS10255 2059839 .. 2059849 -  -3.2  -3.27786   TTCAAAAGTTATTAA                 TCCG TTA CAGA                 CCCGTAAATCCTCCG  48 19
LT978_RS10250 2059386 .. 2059405 -  -2.8   -4.2237   AAACCAATTTGAAAA            GAGAACAC GTTT ACGTTCCC             GTTACCCGGCCTACG  58 16
LT978_RS10245 2058802 .. 2058822 - -11.2  -5.63517   TGCTCAAATAAAAAA            CCTTTCCG GCGGA CGGAAAGG            TTTTAATTCATCTGA 100 28
        acnA 2054351 .. 2054375 - -15.9  -4.82901   CCTCCCGCATAAAAA          GAGAGAAAGCA GAC TGCTTTCTCTC          CTTTGTTCATTCTGC 100 40
LT978_RS10215 2053811 .. 2053833 -  -6.3  -5.88565   TTTACAATAAAAAAA           CTGAACCTC TATTT GAGATCCAG           TTTTTCTTTCATTTC 100 11
LT978_RS10210 NONE
LT978_RS10205 NONE
         tlp 2053118 .. 2053131 -  -8.1  -5.88197   GGAAAGAGAAAAAAA               CCAGG TTTC CCTGG                TTTTTATTATGATTG 100 32
LT978_RS10195 NONE
LT978_RS10190 2052295 .. 2052313 -  -8.9  -5.42259   TTACGTGTAAAAAAA             GAACGCA GCGGA TGCGTTC             TTTTTTTTACAGCCT 100 32
LT978_RS10175 2050730 .. 2050761 -   -11   -5.4505   TCTTTCAATAAAAAA      GCAAAAACCCCTGA TTTG CCAAGGATTTTTGC       CTTTTTTGTTCCTAT 100 37
        parE 2048362 .. 2048384 -  -3.4   -3.8901   CGGTAAATCATGAAA           TAATTCTGGC TGT GCCACTATTA           AACCTCCTCAGCGAC  55 23
        parC 2045909 .. 2045939 -   -17  -2.70419   ATGAAAGCTAAATAG       TAAAACCTCCGCTC AAT GAGCGGAGGTTTTT       TATTTTATTTTTACT 100 42
LT978_RS10155 2043555 .. 2043578 -  -8.9  -5.36441   TTTTCACATAAAAAA          CCCCTCACA ACAAAA TGTAAGGGG           TTTTTTGAAAATTGT 100 53
LT978_RS10150 NONE
LT978_RS10145 NONE
LT978_RS10140 NONE
        uxuA NONE
LT978_RS10130 2038794 .. 2038821 -    -5  -3.44051   TTTTCACTAGTATAA        GTCAGA-AGTAAA TAG TTTACAATCTGAC        AGGGAACTGGATTCT  56 42
LT978_RS10125 2037749 .. 2037760 -  -7.2  -3.93288   GTTTATGTAATGAAA                CCGG TTAT CCGG                 ATTGCCTTGCCAGAA  72 18
LT978_RS10120 2036371 .. 2036397 -  -5.8  -4.51174   GCAGGAGAACGAAAA         GGCCATCCCG TTATCGG CAGGACAGCC         TCAGTGGCTTTGATG  72 43
LT978_RS10115 NONE
LT978_RS10110 NONE
LT978_RS10105 2033222 .. 2033242 - -10.4  -4.95155   TGTAGATGAGAAAAA            GCCGCCTG ATGAA CAGACGGC            TCTGCAGCTTGTTAT  93 37
LT978_RS10095 NONE
LT978_RS10090 2031837 .. 2031879 -  -5.7  -4.41895   AATCTTTAATGAAAA TTCCGTCTCGTTATCTTAAG TATA CTTA-GTTGATGAGACGGAA TTAAAAAATAGGATG  69 63
LT978_RS10075 2028355 .. 2028381 -  -8.8  -6.02914   GCTATACAAAAAAAA         CGGTTCTGCT GATTAAT AACAGAACCG         TTTTTTCCTATTGTT 100 33
LT978_RS09980 NONE
        galU 1973361 .. 1973380 -  -2.2  -2.56864   TTGACAAGCAAAATG            GTTACAAA TTAT TTTTTAAC             GCACGATTTCTTCAG  40 21
LT978_RS09970 1972667 .. 1972705 -   -11  -6.02919   GTATAAATAAAAAAA   GACTGCATAGATCCGGCT CGC AGCCGTTCTTATGCAGTC   TTTTTTCACAGTCTT 100 31
LT978_RS09880 1919755 .. 1919773 - -13.2  -4.67943   CGGCAAGACAGAAAA             CCCCTTGT TAT ACAAGGGG             TTTTTGAGTTGAATA 100 103
         ggt 1916437 .. 1916475 -   -17  -4.32579   ACAGTGCAGAATAAA   CAAAAGCCTCATTTCTCA GCT TGAGAAACGAGGCTTTTT   GCCTAGTTATTTTTT 100 32
LT978_RS09835 1912495 .. 1912514 - -12.2  -3.29874   TTAAAAACAAATAAG            GGAACGGA CGGG TCCGTTCC             TTTTTTAGACATCTA  89 30
LT978_RS09820 1904833 .. 1904860 -  -6.3  -5.02231   TAAAAATATGAAAAA        GCCCGAGGCTTC GTTTT GAAGC-TCGGGT        TTGTTTTTTATTGAT  80 33
LT978_RS09795 1900815 .. 1900826 -  -2.2  -4.72986   TAGTGTCATCAAAAA                CGTC GGAT GACA                 TGCAGGCTCATAAAC  64 33
LT978_RS09790 1899981 .. 1900002 - -11.5  -2.73875   CGCTTCTTAATAGCA           GCGCCCCGA AAAT TCGGGGCGT            TTTTTTACGGCTGAT  81 30
LT978_RS09770 1893485 .. 1893507 - -13.5   -3.3907   GCAAATCTTAATGAA           CGGGAAGAG AAAAA CTCTTCCCG           CTTTTCATAGCAGCT 100 302
LT978_RS09760 NONE
LT978_RS09755 1892175 .. 1892191 - -10.9  -4.90302   GATTAATAAAAGAAA              GCTCTCT TTT AGAGAGC              TTTTTTCAGATTTTC  93 39
LT978_RS09745 1890050 .. 1890077 -  -2.9  -2.63079   GGCTTACACAATTCA       GCTCATCGCTATA TGAA TATAGC-ATG-GC        CGGTGTGGAAATGCA  41 487
LT978_RS09720 1886723 .. 1886747 -  -9.4   -5.1861   GGCACGATTAAAAAA         CATCCCTG-CT TTTT AGACAGGGATG          TCAGCCGTACTGACT 100 26
LT978_RS09710 1885470 .. 1885486 -  -9.3  -5.88471   TATTATTAAAAAAAA              GCCGTGC TCT GCGCGGC              TTTTTTCTATTGATG 100 68
LT978_RS09695 1883250 .. 1883292 -  -8.7  -6.02914   CGGATACAAAAAAAA CCCTCCTTAA-ATGGTTTAA TCTA TTACACCATATTAACGAGGG TTTATCTATCATTTT 100 41
LT978_RS09690 1882238 .. 1882257 -  -6.4  -5.45802   GCGTCAAAATAAAAA            GACGGG GCGGTTTT CCCGTC             TTTATGTATTAATGC  89 34
LT978_RS09650 1875858 .. 1875872 -  -3.6  -3.75024   TTTGATGATGAACAA               CTGAAA TCA TTTCAA               AATGGCCATTCTCAT  53 390
LT978_RS09640 NONE
LT978_RS09635 1875164 .. 1875187 -   -11  -4.62051   AAATATCACATAAAA          GCCATCCGAA TGCA TGCGGATGGC           CTTTTTATTATATAA  90 33
LT978_RS09615 1872400 .. 1872424 -   -13  -4.80453   GCATGACAAAAGAAA          GAAACTGCTG ACAGG CAGCAGTTTC          TTGTTTGATTTAATC 100 35
LT978_RS09610 NONE
LT978_RS09605 1869585 .. 1869607 - -16.3  -3.13368   AGACCAAAAGAAGCA           GGCCCCCGT TCAAG ACGGGGGCC           TTTTTTAATAAAGCG 100 30
LT978_RS09595 1866990 .. 1867001 -  -7.2  -5.47218   GGGGATGTAAAAAAA                GCGC TTTT GCGC                 CTGTTTCGTGATCTG  93 86
LT978_RS09545 NONE
LT978_RS09540 1852272 .. 1852303 - -11.7  -4.48877   GAAAGACTGATAAAA      GAAGGGATAAGGC TGAAAT GCCTTATCCCTTT       TTTTGTGTCAGGTCG 100 16
LT978_RS09515 1849406 .. 1849426 - -10.3  -5.68438   TTATTAAAGAAAAAA            CGGCCTGCA TCG CGCGGGCCG            TTTTTTTATCTTAAA 100 31
LT978_RS09505 NONE
LT978_RS09500 1848107 .. 1848131 - -17.3  -3.73088   ACATGTGATGAATAA          TAAAGGCTGCC CAA GGCAGCCTTTA          CTTAATGATAATGTT 100 40
LT978_RS09490 1846988 .. 1847015 - -14.2    -5.252   GATTCCTATAAAAAA        CCCTTAGTCTGC TTAA GCGGACTAAGGG         TTTCTTTCATCTTAC 100 37
LT978_RS09475 NONE
LT978_RS09470 1843531 .. 1843587 - -16.8  -2.94924   TCGCCACCTACAAAT GGCAC-AAAAAGTAAAAAGCCGGCACA TCGA TGTGCCGGCTTTTTTCTGTTAAGCGCC TTTTTGGTTCAGTTT 100 17
LT978_RS09455 1839452 .. 1839480 - -10.3    -4.946   ATGAAATAGTAAAAA        CACCCGATGCG TCGCTCG CGCATGGGGTG        TTTTTGGTTTGCGAA  93 50
LT978_RS09445 NONE
LT978_RS09440 1836813 .. 1836838 -  -7.6   -3.8917   GTGTAATGAGAAGAA         GCCCGCTT GAAAAATAGA AAGCGGGC          TTTCTTTATTACCAG  74 34
LT978_RS09425 1834888 .. 1834918 - -17.7  -3.09327   CCAGCCGAGGTAAGA      CGG-AGCCGGCTGA AGAT TCAGCCGGCTTCCG       TATTGTCTGGGAAAG 100 47
LT978_RS09405 1832965 .. 1832975 -  -5.4  -3.70438   AAAGGACTACGGAAA                 GGAA TTA TTCC                 GAGTTATCGGTCACA  59 435
LT978_RS09325 NONE
LT978_RS09320 1819980 .. 1819997 -  -9.9  -5.34055   ATAAACATGAAAAAA             GCAGCTT ATCC AAGCTGC              TTTTTGATGTGAAGA 100 46
LT978_RS09310 NONE
LT978_RS09290 1816684 .. 1816700 -  -3.5  -4.72201   TGTGATAAAAAATAA              CCCTGTC TTA GGCGGGG              GATTATTACATGCTG  67 31
LT978_RS09285 1815483 .. 1815516 -  -9.7  -4.43477   CTTACCTAATTAAAA     CAAAAGAGTGAAGGT TGTA AGCCTCACTCTCTTG      TTTTTAATGTATAGT  89 40
LT978_RS09280 1814852 .. 1814876 -  -9.4  -3.90112   GGGGTTTTAATTAAA          TAAAGCAGAC ATTAA GCCTGCTTTA          TCTTTTTGAACATTA  81 84
LT978_RS09270 1813607 .. 1813622 -  -6.8  -5.50925   AACGAATACAAAAAA              GCCCCA CGAA TGGAGC               TGCTATATACGTATT  90 39
LT978_RS09265 1812038 .. 1812061 -  -7.5  -5.47218   GGTTAGCTAAAAAAA          GGCAAAGAG TCAACG CTCTTTACC           ATCAGGTGTTTTCCT 100 11
LT978_RS09255 NONE
LT978_RS09250 1809636 .. 1809654 -  -8.1  -5.69473   CAGATCATAAAAAAA             CACCCCC TATGC GGGAGTG             CCAAAACATTTATGC 100 35
LT978_RS09245 1808272 .. 1808292 -  -8.3  -4.23528   TAATTTAAAATTAAA            GCCCCTT ATTCAGG AAGGGGC            TTTTGCTTTGCAACT  82 53
LT978_RS09175 1799228 .. 1799248 - -13.3  -2.78725   AGAGCTCAGCAATGA            GGCCTGCCT ATC AGACAGGCC            TTTTTTCTATGTTTT  93 32
LT978_RS09160 1797657 .. 1797680 -  -5.3  -5.93809   TTTTCATAAAAAAAA          CACAGATCC TTTCAG GGATTTGTG           TTTTTTTGTGTCAGC 100 36
LT978_RS09130 NONE
LT978_RS09125 1792074 .. 1792100 - -10.9  -5.60993   CCGTGCATAAAAAAA         GCACAGTCTCT ATACG AGAGGCTGTGC         TTTTTTATTTCAGAT 100 35
        metA 1782233 .. 1782245 -  -3.3   -4.0342   TGTAATCAACAACAA                GCAAG CTT CATGC                ATCGTAAGGAGTTAT  55 207
LT978_RS09065 1781032 .. 1781052 - -14.1  -5.86609   GGAAAAAAACAAAAA            GCACACGAA TCG TTCGTGTGC            TTTTCTTTTACGATA 100 33
        cspD 1780586 .. 1780605 - -13.6   -3.5486   GACGGCAATCAAATA            GGAGAGGC ATAC GCCTCTCC             TCTATTTGTCATCTG 100 58
LT978_RS09045 1779963 .. 1779987 - -15.9  -5.59655   CAAATCAATAAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTCGAATTCATC 100 23
LT978_RS09030 NONE
LT978_RS09025 1777925 .. 1777939 -  -2.8  -3.77831   GGATGAACAGTGAAA               CGCAAT TTC ATTCCG               GTTATTTATTCAGCC  51 27
        sspL 1777732 .. 1777771 - -12.2  -3.06837   AGAATGCTCGAAAAG  CTGAACGCCAGAGAGATC AGCT GATCCCTCTAGCGTTTTG   TATTGCTTTTTTTTG  87 15
LT978_RS08980 1769528 .. 1769555 - -14.4  -3.31054   AAATAAGATCAGGAA        GCAGATGATTTT CTCG AAAATCATCTGC         TCTTGCGAAATGAGG 100 385
LT978_RS08970 1769021 .. 1769033 - -10.5  -5.72207   GTGAAACTAAAAAAA                GGGGC AAA GCCCC                CTTATATTAGCAGCT 100 84
LT978_RS08955 1766335 .. 1766352 -    -7  -5.79588   CTAAAACGAAAAAAA             CCCTTG ATGTGA CAAGGG              TTCAAGAGGGTTAGT 100 432
LT978_RS08925 1759951 .. 1759971 - -15.5  -3.12005   GATATAATTTTAACA            GGCTGTCGA TAT TCGACAGCC            TGTAAGCATCTTTAC 100 55
LT978_RS08870 1751184 .. 1751209 - -13.5  -5.27938   ATCTTCAAATAAAAA         GCATGAATGAT ATCC ATCATTCATGC          TTATTTTTTAGGGAA 100 26
LT978_RS08860 1750327 .. 1750352 - -13.3  -4.82855   GATGAAATTGAAAAA         GAAGGCAGCTG AAAA CGGCTGCCTTC          TTTTATATAAAGGGG 100 50
LT978_RS08845 1749330 .. 1749358 - -11.8  -5.09521   TGAAGAAATGAAAAA        GCCCGAAACC GTTCGCTGG GGTTTCGGGC        TGCTGATGTGTTACG 100 36
        recU NONE
LT978_RS08830 1744857 .. 1744881 -   -13  -5.52384   TTTGTATGAAAAAAA          TCCTTCACCT GTTTG AGGTGAAGGA          TTTCGTCCGCTAATG 100 35
LT978_RS08735 1727561 .. 1727576 - -11.8  -3.96696   AACACGAACAGTAAA              GGCGGC TTTT GCCGCC               TTTTTATTATCGTCT  90 32
LT978_RS08555 1695440 .. 1695459 - -13.6  -4.17657   CAGCAGACGTTAAAA            GGCATGCG AACC CGCATGCC             TTTCTCTGTTTTTTA 100 38
LT978_RS08465 1679010 .. 1679041 - -19.6  -5.42259   TGATCGGCAAAAAAA      TAAGACTCCGGCCG ATAA CAGCCGGAGTCTTA       TTCAGGACGAAAAAG 100 64
        serA 1676267 .. 1676290 - -12.6  -5.58209   TTAAACGTAAAAAAA          CCCAAAACAT ATGA ATGTTTTGGG           TTTTCTGTTGGTTAC 100 37
LT978_RS08380 1662937 .. 1662949 -  -3.3  -3.08046   CTTTTATGCTAAAAC                CAGTG TAC CACAG                CGCTTTGAAAAGGAA  46 74
LT978_RS08375 1662376 .. 1662399 - -11.8  -5.03994   TTTGATATAGAAAAA          GCAG-GGCTGA CCG TCAGCCTCTGC          TTTTTTTTCTTCTCT 100 15
LT978_RS08325 1654443 .. 1654469 -  -9.5  -5.82036   ACAATAAATAAAAAA        GAGACCGGAACA ATGG CGT-CCGGTCTC         TTTTTGCGTTCAGCT 100 35
LT978_RS08200 1633457 .. 1633471 - -12.8  -5.40072   GCGGCCCGAAAAAAA               GCCGCG TGC CGCGGC               CGCCGTATATTCATC 100 269
LT978_RS08185 NONE
LT978_RS08180 1630772 .. 1630793 - -10.1  -4.74787   ACAAATATAAATAAA           CCGGCATCT GACA AGGTGCCGG            TTTTATTGTTTAAGA  91 35
LT978_RS08170 1629477 .. 1629504 -   -10  -3.62096   TTTTATGACGGGAAA        GCGAAAGAAC CAGCATAC GTTCTTTCGC         TTTTTTACGTTTGCG  80 30
LT978_RS08140 NONE
LT978_RS08135 NONE
LT978_RS08130 NONE
LT978_RS08125 NONE
LT978_RS08120 1623465 .. 1623475 -  -4.6   -2.8805   ATTACGCCGTATACA                 CGGA GGA CCCG                 GATCGGATAAAGGTG  47 69
        proC 1617704 .. 1617722 -   -11   -5.3671   AACAGAATGAAAAAA             GCATGGGA TGC CCCCATGC             TTTATGACTGGTCCG 100 27
        loaP 1546884 .. 1546909 - -11.9  -2.74094   GTTTATATAAAAAGG         GCATCAACGGC ACAT GCTGTTGATGC          TTTTTTTGAAATGCT  86 39
LT978_RS08000 1545174 .. 1545191 -  -6.3  -4.06678   ATTCAGTCATATAAA             CTGCTCA CAAC TGAACAG              ATCGTTCTTATTGTT  68 266
        namA 1544052 .. 1544085 -  -9.5  -6.20267   CGAAAAATAAAAAAA     GAGACAGCCGGGATC GAAA AACTCCGGCTGTCAC      TTCATCACCATGCTC 100 30
         zwf 1540275 .. 1540302 - -15.6   -4.8048   TTCTGATATTAAAAA        CCGCGG-GCCGTC ATG AACGGCGCCGCGG        TTTTTAAATTTTTTC 100 41
LT978_RS07960 NONE
LT978_RS07955 1536206 .. 1536230 - -17.2  -5.62045   AGATACAAGAAAAAA          CCCTGCCGGA TAGGT TCCGGCAGGG          TTTCAGTATTATGAT 100 34
      prli42 1532808 .. 1532820 -  -2.6  -3.08438   GAGGACATTGCAATA                GAGC GGAAA GCCC                TCATAAAAAAGCAGG  43 71
LT978_RS07900 1527223 .. 1527249 - -15.3  -5.86061   GTCTATTAAAAAAAA         CTCCTTTTGCC CGGGC GGCAAAAGGAG         CTTTTTTATTTTCAT 100 37
LT978_RS07855 1516765 .. 1516782 -    -7  -4.68593   CGGACGACTGAAAAA             GCCCTT TTTTGC AAGGGC              TTTTTTTACAGCTTT  79 31
LT978_RS07800 1506387 .. 1506406 -  -7.8   -5.0916   TTTTCAACACAAAAA            GGGCGCTT TTTT AAGCGCCT             TTACTTTTTTTTCAG  89 26
LT978_RS07795 NONE
LT978_RS07790 1504740 .. 1504757 -  -9.1  -5.63103   TGTGAATCAAAAAAA             CTACCGG ACAT CCGGCAG              TTTTTTAGTCTACTT 100 35
LT978_RS07785 1504389 .. 1504408 - -13.6  -4.45259   AAACGGCAAAAAGAA            TCCGGCTG CTGC CAGCCGGA             AAGGGAGGGAAATAC 100 46
LT978_RS07780 1504074 .. 1504090 -  -9.3  -3.18912   TTATTTATGCAGTAA              GGGCAGC ATG GCGGCCC              TTACAATGACTTTAC  74 26
         alr 1502396 .. 1502422 -    -8  -5.04385   GACATCGCCAAAAAA         TTCAACACGACC GCA AGCCGTGTAGAA         CGGGCCATCCGCCAC  90 338
LT978_RS07640 NONE
LT978_RS07635 1478561 .. 1478579 -  -8.9  -5.79526   ACACCGCAAAAAAAA             CTAGCTC TCATT GAGCTAG             GAAAAAGCAGAACAG 100 66
LT978_RS07615 1475658 .. 1475683 -  -8.4    -5.626   CACGGTATAAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTCATGATTAG 100 37
LT978_RS07595 NONE
LT978_RS07590 1468769 .. 1468788 -  -2.1  -3.73859   TATTATAATATAGAA            TTTCCAG AAAAAA CGGGAAA             GGTGTCGAATGGATA  50 45
LT978_RS07585 NONE
        sinR 1468064 .. 1468097 -  -8.2   -4.2349   GTCGGACAGTTAAAA     GAGGAGTTGTG-CAC ATATG GCGGCACTACTCCTC     TTTTTGCGCTTTTCT  82 17
LT978_RS07560 1465353 .. 1465375 - -13.4    -3.889   GCGAATCACACGAAA           GGTCCTCCTG TAT CAGGAGGGCC           TTATTGGTATTCCTC 100 26
LT978_RS07510 1458561 .. 1458600 -  -9.2  -4.98436   TTAAGATGATAAAAA  GCTGAATGGCCGGGAGGG ATTT CTCCCTCAGCTATTCAGC   TTTGTCAGCTTCAAT  91 17
LT978_RS07500 1457527 .. 1457563 - -11.7  -5.16133   ATCATAAGAGAAAAA    CGAAGATCCGCTGATCA AAT TTATCAGCTAATCTTCG    TTTTTTGCGGTTGCG 100 40
LT978_RS07490 1456625 .. 1456646 - -10.9  -5.37593   CTGTAAATGAAAAAA           GACAGACCA TAAT CGGTCTGTC            TTTTTCTGTTCAGTG 100 35
LT978_RS07480 1455621 .. 1455649 - -14.7   -5.5112   TGCAGCAATAAAAAA        TAAGCCTGTATCC ATT GGATACAGGCTTT        TAATGTGCAGTCGGA 100 25
        nhaC 1450168 .. 1450199 - -14.6  -3.29144   GGATTTTTTGCATAA      GAAAACCTGCCG GAAAAAAA CGGCAGGTTTTC       TCGTATTGTCAGCTT 100 34
LT978_RS07430 NONE
LT978_RS07425 1447851 .. 1447875 - -11.3  -5.52384   TTCGGATGAAAAAAA          CGGGCCCGGCC ATT AACCGGGTCCG          TTTTATATGTCTATT 100 93
LT978_RS07375 1437449 .. 1437471 -  -8.4  -5.31275   GTTCATGACAAAAAA           GAAGACCGCC GGG GGCAGTCTTT           GTTACACAGCTGTTT 100 27
LT978_RS07370 1437072 .. 1437082 -  -2.6  -4.35604   CGAACTGACAAGAAA                 TTAA CGT TTAA                 TTGCGGTAGACGGGG  58 22
        ispG 1435811 .. 1435833 -   -12  -5.55698   CACAACGCAAAAAAA           GCTTGGCGGA ATA TCCGTCAAGC           TTTTTGTGTTTCTTG 100 20
LT978_RS07355 1434676 .. 1434696 -    -9  -5.24129   CGTGCCGATAAAAAA            CCTCCTGC TATAT ACAGGAGG            TTTTTTTCAGCTTTT 100 32
LT978_RS07340 1432859 .. 1432878 - -10.7  -5.46657   CAGCTCAATAAAAAA            GGAGGGG GAATTG CCCCTCC             TTTTTTACCCCGAGA 100 30
LT978_RS07325 1429697 .. 1429712 -  -6.1  -5.10767   GAGGCAATATAAAAA              GCCGT AGTTAA ACGGC               TCAAATCTTGCATTC  80 86
LT978_RS07320 1428691 .. 1428709 - -14.6  -5.60993   CTTCTTATAAAAAAA             CTGAGGCC CCG GGCCTCAG             TTTTTTATTTTTACT 100 22
LT978_RS07190 1404581 .. 1404600 -  -4.9  -5.80248   TAACAGATAAAAAAA            CCGGTGC CTTCCC GCATCGG             TTTTTTTACGGTTTC  93 31
        rpsT 1390151 .. 1390171 -    -9  -5.64006   ACTGAATGAAAAAAA            CGATCCCC GTTAA AGGGATCG            TTTTTGTATTATGCA 100 34
LT978_RS07110 1388722 .. 1388742 -  -6.8  -5.37865   GCAAGAAGTAAAAAA            GACTGCCG ATTGA CAGCAGCC            CGGAATGCGGCTAAG  89 36
       comER 1384173 .. 1384195 -  -7.8  -5.00138   CAGGCAAACCAAAAA           CCATCGTT TAAACGG AACGATGG           TTTTTAAAATGCATT  86 82
LT978_RS07045 1378565 .. 1378583 -  -7.4  -3.53091   AGCCGTCCTCTTAAA             CACCTCTA TTT TAGGGGTG             TTTTTTGTTGAAAGT  66 122
LT978_RS07030 1375906 .. 1375943 -  -9.2  -2.96274   GTTCTCAGAATGAGA   GGAGC-CGTACCGCC GGAATAGGA GGCGGTACGCGCTTC   ATTTTTTCGTTGTTT  73 24
        sigK 1373197 .. 1373216 -  -4.3  -4.97402   TAAAATGCAGAAAAA            GCCGGGAT GTCAG AT-CCGGC            TTTTCGCTCACTTTC  73 33
LT978_RS07015 NONE
LT978_RS07010 1371161 .. 1371175 -  -5.7  -2.90075   GCTTGTTCAATTAGA               GGAAG TGATT CTTCC               TTAAGGGAGATCACT  53 338
LT978_RS07005 1369898 .. 1369918 - -11.9   -3.6269   TTAGTGACATAAAGA            GGAAGGGAT AAG ACCCCTTCC            TTAAAACCTTTAATT  90 56
LT978_RS06915 1351933 .. 1351956 - -15.4  -4.14392   CTGTAATCTTCAAAA          CCCTTCTCTG GCAG CAGAGAAGGG           TTTTTCATCACTTTT 100 78
LT978_RS06880 1342695 .. 1342705 -  -3.2  -3.15324   CAGGCGTATGAAAAG                 GTGC ATA ACAC                 TGATTCAAAAGTTTC  46 257
        fdhF NONE
LT978_RS06835 1332029 .. 1332050 - -13.1  -6.22691   GAAGAATAAAAAAAA           GCCATTGTC TTTT GACAATGGC            TTTTTCATTTCTTAT 100 37
LT978_RS06805 1327807 .. 1327851 - -13.2  -4.26189   GTAGAAACGTTAAAA TAACCGCAAAAAAGCAGCTGA TTAT TCAGCTGCTTTTTT-CTGTCA TACGTCAGCTGAAAA 100 23
LT978_RS06735 NONE
LT978_RS06730 1312698 .. 1312726 -   -14  -4.37886   TCACTCCTTATAAAA       CG-GGGATGAGCA TGCA TGCTCATCCCGCG        GTCCGTCCTATTTTG 100 33
LT978_RS06725 NONE
LT978_RS06720 1311327 .. 1311348 - -11.7  -5.09426   TTTAAGCGGAAAAAA           GGATACTTC TCCG GAAGTATCC            TTTTTACGTTTGTCT 100 29
LT978_RS06675 1303022 .. 1303043 -  -6.6  -5.67529   AAGTAAAAAGAAAAA           CAGCCTTC TTCAGG AAAGGCTG            TTTTTTTATTTGAAT 100 70
LT978_RS06645 1296610 .. 1296625 - -10.4  -5.72254   CTAAACAATAAAAAA              GCTGCC GTTC GGCAGC               TTTTTTTTTTATGAT 100 34
       spoVB 1285401 .. 1285435 -  -3.7    -4.855   CAAAAAGAAAAACAA    TAAGGATAAGCAGATG GAAA CATC-GCTTATCGTTG     ACGGGGTCATTCAGA  73 200
LT978_RS06590 1284368 .. 1284384 - -12.3  -5.77988   ATACATACAAAAAAA              GAGCGGA GAA TCCGCTC              TTTTTTTATTACGCT 100 34
LT978_RS06525 NONE
LT978_RS06520 1271590 .. 1271606 -  -5.8  -5.71712   TTCGATATAAAAAAA             GCTCCCC TTCA GGGG-GC              TTTTTTTTAATCTTT 100 32
LT978_RS06415 1252939 .. 1252963 -  -7.1  -4.30559   AATAAAAGCGGAAAA          CGAGTCCTCTT CAT AACGGGACTCG          TTTTTTTATATCCAT  76 31
LT978_RS06370 1242902 .. 1242924 - -16.4   -4.8622   GCCGGTAATGAAAAA           CCCAAAACGC AGT GCGTTTTGGG           TTTTATCGTATAGTT 100 28
LT978_RS06300 1224184 .. 1224210 -    -8  -5.28176   GGGACGTATAAAAAA         CCTCAAGCCC TGACAAT GGGTTTGAGG         TTTTTTTGTATTTTA 100 465
LT978_RS06225 1214386 .. 1214408 -  -9.9  -4.66163   ACGGGCAGGCAAAAA          GGCGG-GACT TTTG AGTCACCGCC           TTTTTCAATTATACA  89 34
LT978_RS06175 1202932 .. 1202956 - -12.9   -5.1615   TTAATACTGAAAAAA          GGCTGCCGA ACTCAAA TCGGCAGCC          TTTTTTATTGAGAAT 100 30
        rnhC 1196302 .. 1196323 - -13.1  -5.40464   GAGGATAAAGAAAAA           GCTTGCAGA TCAT TCTGCAAGC            TTTTTTTATTATGAC 100 34
        sspI 1191361 .. 1191380 - -10.7   -6.0427   ATTATACAAAAAAAA            CCGGGTG TGCCAT CACCCGG             TTCATGCTTATTGCG 100 33
LT978_RS06120 1190170 .. 1190197 -    -5  -3.45817   CCCTGATAAGAAAAG        CGTTTTCATTTA ATTG TAAAGAAAAACG         ATTCCGCACACTATG  56 69
        glcD NONE
LT978_RS06110 1187373 .. 1187397 - -10.8   -4.4891   TGCAGCATCATAAAA         GCAGAGAG-CC GATC GGTCTCTCTGC          TTTCGGCTTATGACA  90 33
LT978_RS06045 1171963 .. 1171987 - -11.4   -5.8096   TATAAAAAATAAAAA          GCAGGAGAGC TTATC GCTCGCCTGC          TTTTTTCGCTTTTTT 100 11
LT978_RS06000 1165361 .. 1165381 -  -6.8  -5.56264   CGGAAATACAAAAAA            CCCCGTTC ATTCA GAATGGGG            TTTTTTTGCGTATAA  90 43
LT978_RS05950 NONE
LT978_RS05945 1153697 .. 1153720 - -16.8  -4.55295   CTGGGCATAAACAAA          CACCGTTCGG AAAG CCGAACGGTG           TTTTTCTGGTTAAAA 100 35
LT978_RS05895 1141715 .. 1141729 -  -5.7  -4.21303   AAAAAGAAGCAGAAA               TCGAG CCCTT CTCGA               GATGAGGAGGGTTTT  68 62
        ytvI 1139093 .. 1139117 -  -5.6  -5.68438   TTATCAAATAAAAAA          CGGCAGCCTT CTTAC AGGGCTGCTG          TTTTTATTTGGATTG  95 29
LT978_RS05835 NONE
LT978_RS05830 1127784 .. 1127797 -  -3.1  -3.38674   AAAATTTTTAAAAAT               GACAT AATT ACGTC                GCAAAAGAAATATGA  49 19
LT978_RS05825 1127476 .. 1127489 -  -8.1  -2.96822   TAACGAACACAAGTA               GAGGG GAGA CCCTC                TTTCTTAGTGTTCAT  67 30
LT978_RS05815 1125647 .. 1125663 -  -6.6  -3.96624   GACGGGCATCACAAA              CTGATC GGAAT GATCAG              CCGCCAGGATGTCTT  68 478
LT978_RS05745 1112512 .. 1112537 - -15.5  -4.80882   ATCGTATATGAAAAA         GAGGACAGGCA GTGA TGCCCGTCCTC          TTTTTTTATGATAAA 100 31
        brnQ 1104884 .. 1104912 - -12.6  -4.32482   ACGCACAAGCCAAAA       CTGCACC-CTGAT GGAA ATCAGAGGTGCAG        TTTTTTTGTTTCTCA 100 95
        hisJ 1101789 .. 1101811 -  -9.1  -3.06737   TATGAACGGTGAAGA           CGCGCAGGA ACGCA TCCTGCGGG           TGGTTTTCGATATTT  66 383
LT978_RS05695 1100918 .. 1100942 - -13.6  -5.39721   CGACGACATAAAAAA         GGAG-CCGGCC TGCC GGCCGGGCTCC          TTTTTTTATCCTAAT 100 31
        rpsD 1098206 .. 1098239 - -12.5  -5.46706   AGCCCAAAAGAAAAA     CCCCGGAAACATTGT CATC ACAACATGTCCGGGG      TTTAATCCAATGCTC 100 58
LT978_RS05680 1096540 .. 1096556 - -12.3  -4.88736   GAGGATTTATAAAAA              GCGCAGA TAC TCTGCGC              TTTTTTATTTAAGTA 100 30
LT978_RS05670 1095167 .. 1095190 -  -8.9  -5.00616   GTGTGTTTTAAAAAA          GATAGGAGG ATGTAA CCCCCTATC           TTCTCATTCTTCCTA  91 233
LT978_RS05640 1089442 .. 1089464 -  -7.7  -5.15634   TACGGCATGAAAAAA           GACCCCTCT GAAAA AGAGGAGCC           AAAAGGTACGGAGGT  89 66
LT978_RS05635 1088805 .. 1088829 - -10.1  -5.66684   CAATCCATAAAAAAA          TGCACAGAC TGAACGG GTCTGTGCA          TTTTTATTCGCTTAT 100 37
LT978_RS05615 1085201 .. 1085235 -  -8.1  -4.46531   AATGAAAAAATCAAA    GAAAATACGGTTCACA TTTA TATGAACCG-ATTTCC     GGTGACGACATGAAA  83 8
LT978_RS05610 NONE
LT978_RS05605 1084061 .. 1084084 - -15.4  -3.90286   CATCATAAAGGTAAA          GCCTCCATTC TATG GAATGGAGGC           TTTTGATTGTCACCA 100 35
LT978_RS05590 NONE
LT978_RS05585 NONE
LT978_RS05580 1077848 .. 1077866 -  -6.7  -5.52384   TTGTGATCAAAAAAA             CGACCTC CTCAT AAGGTCG             TTTTTTATTTTGTTT  90 30
LT978_RS05515 1065209 .. 1065244 - -11.4  -4.96028   GTGTAAAAAAAATAA    GCAGTCAATAAGT-CCC TTT GAATACTTATTGACTGC    TGTTTTTACATTCTG 100 388
LT978_RS05505 1063600 .. 1063632 - -13.7  -3.19192   GCCGATGTAACCGAA      TAAAGCCCAAAAC GCTGATG GTTTTGGGCTTTA      TTTTTTGCTTGTCCG  95 43
LT978_RS05485 1059607 .. 1059626 -  -8.6  -3.04792   TCATTACGTCGAAGA            GCCAGC-GT GGG ACAGCTGGC            TTGGGATGTACGGCA  63 196
        cysK 1055143 .. 1055182 - -19.6  -2.53213   GAACTTGCCAAGTGA  TAATAAAAAGGGACGCCG AAAG CGGCATCCCTTTTTATCA   TTCAAATGACCATAA 100 23
LT978_RS05450 1052322 .. 1052344 - -12.1  -4.70659   CTTTATATGTAAAAA           TCCCTTTCC GAAAA GGAAAGGGA           TTTTTCTTAATGTCC 100 32
LT978_RS05435 1049887 .. 1049912 -   -12   -5.5353   TAGAGGAACAAAAAA         CAAGGCAAAG ACGCTG CTTTGCCTTG          CAGCATGTCAGGCCG 100 66
LT978_RS05420 1045927 .. 1045949 -  -3.4  -2.78996   GACGCTCAGGTAAAT           GCGCTTTAAA CCA TTTACAGCGA           GCGTGAGAAACGTCC  44 17
LT978_RS05415 1044197 .. 1044216 -  -8.6  -5.80951   ACCGAAAATAAAAAA            GCCCGG-AT GAA ATACCGGGC            TTTTTTATGCATTAT 100 37
LT978_RS05405 NONE
LT978_RS05400 NONE
LT978_RS05395 NONE
LT978_RS05390 NONE
        melA 1038381 .. 1038408 - -11.3  -4.67943   GCTGAACATATAAAA        GCG-TCCGGCCC GCCCG GGACCGGATCGC        GAATGATCAGTGATA  90 32
LT978_RS05360 1033011 .. 1033029 - -10.2  -5.39721   TGACGACATAAAAAA             TCCCGCTG TTT CGGCGGGA             TTTTTTTGTTTATAC 100 35
LT978_RS05280 NONE
LT978_RS05275 1017537 .. 1017565 - -13.2  -5.23644   AAGTAAATACAAAAA        GAATCGGCCCGC TTATG ACAGGCCGATTC        TTTATTTTCCGGCAG 100 27
LT978_RS05270 1017236 .. 1017261 -  -9.1  -5.37171   AACAGTAAATAAAAA         GAGACATGCGCA TTT TACGC-TGTCTC         TTTTTTTAACGGTTT 100 14
LT978_RS05250 1013706 .. 1013725 -  -6.4  -5.51165   AAAAGCGTAAAAAAA            GAGCCC GCTGAAAT GGGCTC             TTTTTTCATAGGATC  90 176
        pckA 1006723 .. 1006756 - -10.3  -5.24449   GACAAACTGAAAAAA     CAAAAGCCGAGGGCA TAAA CGCCCTTGGCTTTTT      TGATTACACGAGAGG 100 29
LT978_RS05215 NONE
LT978_RS05210 NONE
LT978_RS05205 1002892 .. 1002914 - -11.3   -2.9676   ATCATAAAAAACGGA          GACCCG-GCG CTTA CGCACGGGTC           TTTTTTATATTTTTC  79 30
        ytzI 1000912 .. 1000933 -  -5.9  -4.19953   CACGTAACGGCAAAA           CAG-CAGCAT AAT ATGCCGACTG           TAAAAGTGCGTGTCG  69 96
        yidD  999318 ..  999334 -  -3.6  -3.98282   CGTATACGAATTAAA              CGCTGA TGAAG TCTGCG              TTATCGGCCACCATG  58 315
LT978_RS05155 NONE
LT978_RS05150 NONE
LT978_RS05145  995857 ..  995875 -  -8.9  -4.98531   GGCGGAAATGAAAAA             GAGCTGT ATAAA ACAGCTC             TTTTCTTTTATAAAT  91 33
LT978_RS05110  986983 ..  986998 - -11.8  -4.66163   ATTTGTATTCAAAAA              CCCCGG CCTG CCGGGG               TTTTAATCAGCATGA 100 28
LT978_RS05105  986348 ..  986366 - -11.8  -5.52384   GGGTCATTAAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTATTATGCGT 100 33
        thiT  978360 ..  978382 - -14.9   -5.4505   GCCCGGAATAAAAAA           CAGCAGGCG TAAAC CGCCTGCTG           TTTCAGTTCGTCCGC 100 28
LT978_RS04965  975626 ..  975654 - -14.7   -5.7946   GCGCCAAGAAAAAAA        TTGAGAAGGTCTG ACT CAGACCTTCTCGA        TTTTTTGTTTGATTT 100 12
LT978_RS04945  971519 ..  971539 -  -9.7  -5.33785   AATCACGACAAAAAA            CGCCTGAAT CAA AATCAGGCG            TTTTTTTCGTCCGTT 100 19
LT978_RS04940  970789 ..  970821 -  -9.3  -5.70829   AACACCACAAAAAAA     GACCGGCTGACAAGC GATGA GCTTGT--GCCGGTC     CGTTTTTCGCAATTA 100 38
LT978_RS04935  969980 ..  969996 - -13.7  -5.58074   TAAGCATCAAAAAAA              GCCGGCA GCT TGCCGGC              TTTTTTTACATTCCT 100 31
LT978_RS04920  966900 ..  966923 - -13.9  -3.27774   GACCGTAATGATCAA          GAGCCCCTC TGCAAT GAGGGGCTC           TTTCTGTCGATGCGG 100 47
LT978_RS04900  963557 ..  963568 -  -4.4  -4.07568   CCCTCTTTTGGAAAA                TTGC ACAA GCAA                 CTACATGGTAACTAA  61 116
LT978_RS04895  962997 ..  963014 - -12.7  -3.69663   ATTAGGATTGAAGAA             GCCGCCT CTAA AGGCGGC              TTTGTTGTTTATCAA  95 37
LT978_RS04875  959373 ..  959396 - -18.2  -5.63517   CGTCCAAATAAAAAA          CATCCGCCCG AATC CGGGCGGATG           TTTTTAGTTTTGATC 100 29
LT978_RS04845  949462 ..  949512 -  -2.8  -5.09259   TACCGGAAAAGAAAA GCATT-TCACA-TCCCATCGTC ACAATGACA GACGATGGGATTGTTTTAATGC ATGATCTGATAAAGC  70 19
LT978_RS04805 NONE
LT978_RS04800  941764 ..  941774 -  -8.2  -3.12895   CGCCGTATGAAGATA                 CCGC AGA GCGG                 GGACGCTAAAGACAA  68 458
LT978_RS04780  939051 ..  939068 -  -4.1  -3.34344   TGATCTTTCAATTAA             TCCGG AACGGGAA CCGGA              GCATGATCAATCCAA  49 4
LT978_RS04775  938251 ..  938275 - -14.3  -5.15969   CGCGAATTTAAAAAA          GGGGCGCTGAT TCA ATCAGCGCTCC          TTTTATGCATTTTGT 100 28
LT978_RS04760  935084 ..  935136 -  -8.8  -5.15634   GACCTTATCAAAAAA TAACCATCAAAAAAAGCACCGGATA TGTA TGTTCGGTGCTTTTTTT-ATGTTTA TCTGACTTCCGGATT  91 23
LT978_RS04740  931831 ..  931846 - -11.8  -4.58395   TGCACCCCTTAAAAA              CCGGCG GTTC CGCCGG               TTTTTTTTATTGAAT 100 32
LT978_RS04730  930279 ..  930304 -  -9.8  -3.27525   TTTCTCTAAAGCGAA         CGCCCTTATC TCATCT GATAAAGGCG          TTCTTTCCGCTGCTA  78 38
LT978_RS04725 NONE
LT978_RS04720  928458 ..  928476 -  -7.4  -5.71712   GGCCACATAAAAAAA             CCCAATCA TGC CGACTGGG             TCAAGTTCTTTTAAA 100 26
LT978_RS04710 NONE
LT978_RS04705  924483 ..  924494 -  -5.8  -3.63515   CGTTATCTTTAATAA                GCTG CCTG CAGC                 GTGTTTTTCCAGATC  62 7
LT978_RS04700  924007 ..  924034 - -17.2  -3.54771   TTTATAATAGCATAA        TGGCTAGCTTAC CTGT GTAAGCTAGCCA         TTTTTGTTAAGACAG 100 32
        malK NONE
LT978_RS04685  920960 ..  920983 -  -6.7  -5.23316   TATGACAGTAAAAAA          GCACCGTTC ACAGCG AAACGGCGC           TTTTTGACATTATAA  88 35
LT978_RS04680  919429 ..  919455 - -13.9  -4.09511   AAGAGCTTGGCAAAA         GAAAAGCTGCA AGAGA TGCAGCTTTTC         CTTCACCGCTCTTTT 100 88
LT978_RS04675 NONE
LT978_RS04670 NONE
        nupQ  915804 ..  915830 - -11.7  -4.41353   GTATATAGATGAAAA        GAGTTCCGGCAC CAGG GTGC-GGAACTC         TTTTTGTGTGGCAAT 100 40
LT978_RS04655 NONE
LT978_RS04650 NONE
LT978_RS04645 NONE
LT978_RS04640 NONE
LT978_RS04635 NONE
LT978_RS04630 NONE
        mnhG  909532 ..  909566 - -11.6  -4.92812   TTATAACAAAATAAA     CAAACAGCCGGA ACCCTGAATCG TCCGGCTGTTTG     TTTTTACAAATATGA 100 29
LT978_RS04590  903529 ..  903545 -  -5.2  -4.75174   CACTCAAGCCAAAAA              GAAATC ATTAA GATTTC              CTTAATCAGGGCCAA  75 360
LT978_RS04505  884611 ..  884640 -  -7.9  -6.14618   CAGAAAATAAAAAAA       CACGGATTTGTGA AATT TCACGAACCCATG        CTGCGAAGTTTGATA 100 13
         ald  883357 ..  883381 - -13.6  -5.72622   GTGAGAAAGAAAAAA          GGACAGCCCG CTGAT CAGGCTGTCC          TCTTCATCTCTATTA 100 38
LT978_RS04450  868073 ..  868092 - -10.7  -5.40072   TGTTCTGTAAAAAAA            GGCTCCC GGAAAG GGGAGCC             TTTTTGTATGCTGAG 100 47
LT978_RS04435  864467 ..  864488 - -14.5   -5.4593   GTAAAAGAATAAAAA           CGCTTCAGC ATCC GCTGAAGCG            TTTTTACATAAAGAA 100 29
        yumC  860471 ..  860497 - -13.1  -5.63517   TGTTTAAATAAAAAA         GAGTCTGTGCC GGTAT GACACAGACTC         TTTTTTATATTATTT 100 35
        guaC  859070 ..  859090 - -11.3   -5.8187   TATTTAATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTTTTATCTT 100 60
LT978_RS04365  854203 ..  854217 -  -2.8  -3.06696   CGTCTCTTGAACAGA               GCTTTT GAT ATAAGC               CTTTGTCATTGACGA  44 174
LT978_RS04360  853340 ..  853370 - -16.3  -4.63486   ATCTGTTTAATAAAA       GCAAAACCCGCTC AACAG AAGCGGGTTTTGC       TTTTTCAAAGAGGTT 100 39
LT978_RS04335  848871 ..  848892 - -14.5  -2.60032   GGGCTCTTAAAAATG           GCCGCTGAT CGCA ATCAGCGGC            TTTTTCTTATCAGCC  95 35
LT978_RS04325  848095 ..  848115 - -12.6  -6.20267   GTAAAAATAAAAAAA            CCAGGCTG TCATG CAGCCTGG            TTTTATGATTAAAAT 100 34
LT978_RS04295  840823 ..  840845 - -11.2  -5.30686   AACATCTATAAAAAA           GGGACGGCCA TGA CGGCCGTCCT           TATTCTGTATTTCTG 100 25
        lytH  836953 ..  836985 - -13.5  -5.48623   AAAGATAAATAAAAA      CACACAGCCGCAA TCTTTCC TGGCGGCTGTGTG      TTTACTTTTTCCTGC 100 27
LT978_RS04235  829085 ..  829113 -  -7.5  -3.34398   CTTGTTTGTGAAATA        CAGAAGCGGTT GGGCATG AACCTCTTCTG        CGGCACCGTAGCCTT  67 280
LT978_RS04210  822637 ..  822659 -  -7.7  -4.70659   CCGTATATTGAAAAA           GGGAGCC TGATGATGG GGCTCCC           TTATCACTTCTTATG  84 47
LT978_RS04200  820312 ..  820328 -  -2.2  -4.56597   CGGCTTGCCGAAAAA             GCCCGCG GTTT CG-GAGC              GAAAATCGTTTGTCT  63 339
LT978_RS04170  814480 ..  814502 -  -9.2  -5.12172   GATGAAGAAAGAAAA           CGCTAAGG AGACGAA CCTTAGCG           TTTTTTTGATTGAAG  91 20
LT978_RS04165  813922 ..  813941 - -10.7  -5.42164   TATAAATAAGAAAAA            CCGGAGC TTAAGG GCTCCGG             TTTTCTTTATGTTTA 100 38
LT978_RS04150 NONE
         csn  810845 ..  810862 - -14.1   -4.4261   CGGTTAATAGTAAAA             CCCCGCC ATAT GGCGGGG              TTTTTTTGTTTATTG 100 35
LT978_RS04045  793693 ..  793714 - -12.3  -4.62085   ATCTTCAAAAAATAA           CGGCTGCTC CAAA AAGCAGCCG            CAGTATGTTATTCCA 100 33
LT978_RS04035 NONE
LT978_RS04030  792054 ..  792083 -    -3  -6.20267   GCAAAAATAAAAAAA       GGA-CTGATGCTT GGCGA AAACATCAAATCC       TTCTTCATTTTACTG 100 35
LT978_RS04025 NONE
LT978_RS04020  789841 ..  789875 - -16.6  -2.85668   GAGGCCCAGATGATA     TAAAAAAATCCCGCGG CAT CCGCGGGATTTTTCTT     TGTTAAACGGCTTTC 100 28
LT978_RS04010 NONE
LT978_RS04005  786789 ..  786819 -  -6.8  -5.54403   AAAAAACAATAAAAA       GCTTTCGGCATC AAAGAGA GGTGCCGGAAGC       TTTTTTGCTGAAACG  90 165
LT978_RS03980  782190 ..  782225 -  -6.6  -5.33405   CGTATCAAATAAAAA    TCAATACTAAATTATAA TTA TTATAATTTAGT-TTAA    GTGAACAGCTTTTTC  88 22
LT978_RS03975  781636 ..  781660 - -10.1    -5.626   GAGCGCATAAAAAAA          GCTGAACCT TCAACTG AGGTTCAGC          TTTTTTCGTCATTCT 100 34
LT978_RS03965 NONE
LT978_RS03960  777933 ..  777955 -  -9.2  -5.71712   CTTCACATAAAAAAA           GACTGCAATG AAA CACTACAGTC           TACTTTGGTACGATA 100 25
LT978_RS03950  776680 ..  776706 - -12.3  -5.00267   AAGCATAAAAAGAAA         GAACGGCTGCA GTCAT TGCGGCCGTTC         TTCTAAATAAACTGC 100 28
LT978_RS03935 NONE
LT978_RS03930 NONE
LT978_RS03925  771251 ..  771275 -  -8.6  -5.71712   CGTGACATAAAAAAA         GGAGAGCG-GC GCCG GCACACTCTCC          CGAGGGACGGGGTCA 100 38
LT978_RS03865  760386 ..  760421 -   -14  -5.82316   ATGATGTAAAAAAAA    GCCCTGGCATATGGGGA AGT TCCCCTTGTGCC-GGGC    TTTTTTGTGTTAAAT 100 35
LT978_RS03835 NONE
LT978_RS03830  754321 ..  754348 - -14.3  -2.72799   TTTTCACACAGAGGA        GACTTGCAGAG ACGGAA CTCTGCAAGTC         GGGTCTGTATCTTCA  95 38
LT978_RS03825  753844 ..  753865 -  -8.7  -5.63374   GTAAGATGAAAAAAA           CGCAGAGCCA TTC CGGC-CTGCG           TTTTTTTATTGCGCC 100 31
LT978_RS03805  749755 ..  749771 - -13.7  -5.10208   TAAGCGTAATAAAAA              GCCGCTG TGA CAGCGGC              TTCGGGGTTACTTCG 100 33
LT978_RS03800  748672 ..  748695 -   -14  -4.91109   TCGGTATGACAAAAA          GACATCTCAC GTCT GTGAGATGTC           TTTTTTTGTTTGCGG 100 48
LT978_RS03785  746014 ..  746030 -  -3.7  -3.08046   TCCTCACCCTAAAAG              CGAAAAG ACG CTTTTTG              TTTAAGAGATGCGGC  48 27
LT978_RS03780  744107 ..  744127 - -11.9    -4.946   ATGAAACATGAAAAA            TCCCTCCAT ATA ACGGAGGGA            TTTTTTTATTGCTTA 100 31
        modA NONE
        modB  741562 ..  741589 -  -8.4  -4.99134   ATTTTAAATCAAAAA        GCCTCCCGGCGAA AGG TGCGC-GGAAGGC        AGATCGGTCAAGCGG  90 33
LT978_RS03760 NONE
LT978_RS03755  739671 ..  739702 -  -9.5   -5.9873   TTATTATAAAAAAAA      GAATGAACGGCCG TTAGTG CAGCTGTTCATTC       CTTTGACATGAGAAT 100 70
LT978_RS03750 NONE
LT978_RS03745 NONE
LT978_RS03740  736402 ..  736419 -  -8.4   -5.4505   TGTTCTAAGAAAAAA             CAGCCC TTTACG GGGCTG              TTTTTCTTTACATAA 100 33
LT978_RS03730  734826 ..  734847 -  -9.4  -5.85737   AGATGAATAAAAAAA           GTCCGGCA TCTGTT CGCCGGAC            TTTTTTAGATTACGG 100 35
LT978_RS03700  724580 ..  724603 - -13.2  -4.67048   GCACGGCAAAATAAA          GAGCCTGCTCC ATA GGAGC-GGCTC          TTTTTCTATTATTTG 100 34
LT978_RS03665  716807 ..  716830 - -13.8  -5.78622   TGATCTTAAAAAAAA          CCTCCCCGCC GTAC GGCTGGGAGG           TTTTTTATATTAAAG 100 35
LT978_RS03650 NONE
LT978_RS03645 NONE
LT978_RS03640  712319 ..  712354 -  -4.9  -4.92757   TCATTAATAAGAAAA   GAGCCGAAATTTACCCC GTTT AGAGTAAA--TCGGCTC    TTTACTATTTAAAAG  74 110
LT978_RS03590  704134 ..  704170 - -13.3  -3.44844   ATTATATAAGATGAA   TATAAAAAACCCCCGC AAAGTG GCGGGGGTTTTTT-TA    ATGCGGATCACGCTG 100 23
LT978_RS03575  702058 ..  702077 - -12.2  -6.07374   ATAAAAAATAAAAAA            GTGTGAGC GAAA GCTCACAC             TTTTTTATTGAGATC 100 30
LT978_RS03540 NONE
LT978_RS03535  695216 ..  695228 -  -3.4  -4.01045   AGAGGATCAAAAAGA                GGAT GAGGA ATCC                GGGGAGCGTTTTTTC  55 4
LT978_RS03530  694762 ..  694787 -  -4.7  -5.67529   AAGCAAAAATAAAAA         CGGCTG-TCCGT TTG AGAGATCAGCCG         CTTATGCGGAAAAGA  93 46
LT978_RS03480  686031 ..  686049 -  -5.9  -5.52384   GCGGCATGAAAAAAA             CGCCTTG CGGGT CAGGGCG             TTTTTTTCTTATGGC  89 34
LT978_RS03455  681760 ..  681787 -  -9.8  -5.08824   TCCTGACTTAAAAAA        GCAGCGCCCG GTTATCTT CGGGGGCTGC         TTTTTTCTATTTTCG  93 9
LT978_RS03445  679935 ..  679959 -  -8.4   -5.8187   CATTCAATAAAAAAA          CCCCCGCGCC AATCA GGCGGCGGGG          TTTCCGTTTTTAAAA 100 35
LT978_RS03435  677515 ..  677540 - -13.2  -3.54489   TGAATGGTAAACGAA         GGGGCGCCGG TATCAG CCGGCGCCCT          TTTTATCATAAATCC 100 31
LT978_RS03345  656462 ..  656513 - -18.4  -5.26875   CGCCGAATTAAAAAA CAGCTGAGCAAAAAAAGCAATGTGC CGC GCACATTGCTTTTTTTATTC-GCCG ATCCGCCTGACGGAA 100 16
LT978_RS03335  654750 ..  654770 -  -7.6  -5.23396   AAGAATGAATAAAAA            GACCCTAA TGATC TTAGGGCC            CTGAATCTTATCGGT 100 33
LT978_RS03325  652828 ..  652847 - -12.2  -6.08342   CAATAAATAAAAAAA            CTCTTGCC CCGC GGCAAGAG             TTTTTTTAATGAACG 100 31
LT978_RS03315  649841 ..  649853 -  -4.9  -3.78124   ATCAACGATGAAGAA                GAAAA ATT TTTTC                ATAAAATTGCCTCAA  60 91
        gntK NONE
LT978_RS03305  646807 ..  646833 - -13.8  -5.64274   TGACCGATAAAAAAA         CAAACCCCGG TTTGCGG CCGGGGTTTG         TTTTTATATAAACGC 100 29
        lutP  639867 ..  639892 -   -14  -3.63805   ACGGTACAGCTGAAA         CCTCCCCGAG CCAAAC CCCGGGGAGG          TTCTCCGTGTTACGG 100 35
        yvfG  638232 ..  638256 - -11.5  -4.45544   CGGCACGAAGGAAAA          CCTTCCGCT TTGAATG AGCGGAAGG          TTTATTTTGTTTCTC 100 27
LT978_RS03185 NONE
LT978_RS03180  620267 ..  620302 - -14.8   -5.0916   TCTGTAAGATAAAAA    TGAAACGCCAAGGGAG CCGG CTCCCTTGGCGTTTTT     TATGCTTGAAACAGG 100 25
LT978_RS03175  619938 ..  619964 - -14.6  -2.54999   ATGAAATGTATGAAC         GAAACCCAGTAA AGG TTACCGGGTTTC         TTTTTCATGTTTGTT  95 14
LT978_RS03160  617999 ..  618016 -  -9.8  -5.57729   AAATAAGAGAAAAAA             CCCGGC AGCTTG GCCGGG              TTTTTTGTATCCTTT 100 40
LT978_RS03135  615895 ..  615921 - -10.3  -4.27117   TTTGTACAAGATAAA        TTAGC-CAGCTC AATC GAGCTGAGCTAA         TTTTGTTTTATTGCT  87 93
LT978_RS03115 NONE
LT978_RS03110  613030 ..  613054 - -14.4  -4.88711   AGAAGATAGGAAAAA          CCTCGCAGAT GATAA ATCTGCGAGG          TTTTTATTTTATCTT 100 34
LT978_RS03090  608595 ..  608609 -  -2.1  -3.64716   GGAGCGCTCAAAATA              GACCGC AGTC GCG-TC               GGTACATACGGCTGA  48 50
        clpP  607752 ..  607778 -   -16  -5.75599   TAAAGCATAAAAAAA         CCTGCAAGAGAC ATC ATCTCTTGCAGG         TTTTTTGGGCATTAC 100 37
LT978_RS03075  605586 ..  605598 -  -2.7  -3.18735   TGAAGACGGTATTAA                CCAAT GTG ATTGA                GCGTATTCATGCTGT  44 9
LT978_RS03070  604110 ..  604136 - -12.4  -4.08557   GGGTTGAAAGAAGAA         CATCCATTTCCT CAA AGGAGATGGATG         TTTTGCGGTTTCCAG  95 52
LT978_RS03060  602908 ..  602937 -  -8.5  -2.99546   GGATAAATTCAGATA       CGGCCTGTCCA TGAAAAAG CGGACGGGCCG        TGTTTTTATTCGGTT  67 31
LT978_RS03045  599329 ..  599349 - -10.3  -4.89063   CTAGTGAAAAATAAA            CCCCGGCTG AAA CGGCCGGGA            TTTTTCATCTCATTG  93 35
LT978_RS03040  598731 ..  598750 - -11.4  -5.40072   TTCTCTGCAAAAAAA            CGGCCTCC GCAG GGAAGCCG             TTTTTTGTATGTGTT 100 40
LT978_RS02930  577685 ..  577708 -  -9.5  -4.34711   AAAACGAATGGAAAA          CCCCGCAGA TTAACG TCAGCGGGG           TTTTTTTATGACTTG  85 31
        nagA NONE
        nagB NONE
LT978_RS02895  571880 ..  571907 - -14.3  -5.58454   GGCAGATCAAAAAAA        CATCTCCAACC CGTAAC GGTTGGAGATG         TTTCATTTCACCCTG 100 28
LT978_RS02860  564588 ..  564621 - -18.4  -3.82205   GTAATAGATCAATAA     CAACAGCCCAAAAC TCATCG GTTTTGGGCTGTTG      TTGTTACAGGCTTTT 100 29
LT978_RS02840  556447 ..  556478 - -10.8  -3.34715   CACCTCGCGTAAATA      CTGGCAGGACAAGT ATAC ACCCGCCCTGCCCG       TCAATAAAGAGGGAA  82 43
LT978_RS02835 NONE
LT978_RS02830  554455 ..  554483 -  -8.2  -4.68539   AGGAAAACTAGAAAA       GGTTCCGGAAAGC TGAT GCTTAC-GGAACC        TTTTTCGTTATGCCG  86 33
LT978_RS02825  553007 ..  553038 -  -7.2  -3.85254   CAGCATTATAAAAGA      GCCCGG-TGCCGC TAACAAC ACGGCGGCCGGGC      TTTTTTTTACGGCCG  70 32
LT978_RS02805  547999 ..  548019 - -15.5  -5.93809   CGTGTATAAAAAAAA            GCCAGTCTG ATA CAGACTGGC            TTTTTTTAATGGTTT 100 43
LT978_RS02670 NONE
LT978_RS02665  523475 ..  523498 - -12.5  -5.05601   TATTATATAGAAAAA          CCCGATCCT GCTCAA AGGATCGGG           TTTACTCTTAATAGC 100 33
LT978_RS02600  507960 ..  507997 - -13.9  -3.48593   CAGCCTTTTACAGAA   TAA-AAAAAACTCTGCAT CAT ATGCAGAGTTTTTTATTA   TTTCAGGCTTTCTTT 100 23
        galU  505673 ..  505719 - -13.3  -4.32046   CGTCTAAAAAGTAAA GATCACATAAAAAAAGCTGCCG GATT CGGCAGCTTTTTCTATTCG-TC AGCTTCTTCTTTTTC 100 17
LT978_RS02560 NONE
LT978_RS02555  496413 ..  496458 -   -15  -3.83026   CCCGTGTATATGAAA GTATAAAAAAAGGGCTGAAG TGTATG CTTCAGCCCTTTCTTCATGC AAAAAACACCCGCCT 100 46
LT978_RS02540 NONE
LT978_RS02535 NONE
LT978_RS02530  488397 ..  488411 -  -5.6  -4.21194   CTTGAGCACTTAAAA               GACCCG TGG CGCGTC               ATTGAAACGTACTCA  66 389
LT978_RS02515  484563 ..  484586 - -16.8   -5.0916   TTTTCAACAGAAAAA          CGGCGGGATT TGCT AATCCCGCCG           TGACATCTTACGCGT 100 33
LT978_RS02510  483551 ..  483572 -  -5.8  -4.99972   AGAAAACATGAAAAA           GCCAGGCC GTGAAA GACCTGAC            TTTTACCTTTTATTG  79 35
LT978_RS02505  482717 ..  482741 - -17.3  -5.40072   GCTTCCGTAAAAAAA          GACGTCAGAGA GTG TCTCTGACGTC          TTTTTCTTTTACCGT 100 34
LT978_RS02475 NONE
LT978_RS02470 NONE
LT978_RS02465  473924 ..  473937 -  -6.7   -5.7946   TTGGCAACAAAAAAA               GAGAC CGGG GTCTC                TTTTAGTTCACGATG 100 28
LT978_RS02460 NONE
        rbsK NONE
        rbsD NONE
LT978_RS02445 NONE
        rbsC NONE
        rbsB NONE
LT978_RS02430  467558 ..  467586 - -10.4  -5.80003   TCAAGAAAGAAAAAA        CGGATTTCGC GCTGAATTT GCGAAATCCG        TTTTGATATTATGTC 100 34
LT978_RS02410  463212 ..  463233 -  -2.2  -6.04378   AAAGCACAAAAAAAA           GAG-GCTGC TTTCG GCGGCCCTC           TTTTTTATGCATTTT 100 30
LT978_RS02405  461671 ..  461694 -  -4.6  -4.64846   CCATAAATGATAAAA          CTGCCT-CTCT TAT ACAGCAGGCAG          TTTTTTTTCATAGCT  68 39
LT978_RS02385  458125 ..  458146 -  -7.2   -4.7497   CTGATTGAGGAAAAA           GGCTTCCG TTTAGC CGGCAGCC            TATTTACAAATGGCG  81 41
LT978_RS02380  457328 ..  457347 -  -7.8  -5.19916   AAAAGACTCAAAAAA            GCCCCCTT TCGA AAGGGGTC             TTTTTGACTAGTTTC 100 63
LT978_RS02375  456522 ..  456540 -  -5.2  -4.14764   CTGTAAAGAAGGAAA             GCCGCACA TCC TGTACGGA             ACCCAGGGAGGAGAA  66 361
LT978_RS02365 NONE
        chrB NONE
        chrA  453444 ..  453459 -    -9  -5.79595   GGCCAAAATAAAAAA              GCACCT GTCC AGGTGC               TTTTCTTTATAAATG 100 32
LT978_RS02340  451590 ..  451615 -  -9.1  -3.19398   AAAAATCACATGTAA         CACTTGG-AGCT CTA AGCCACCAAGTG         TTTTTTTGTATGCCT  70 85
LT978_RS02270 NONE
LT978_RS02265  436358 ..  436393 - -14.9  -2.87404   ACAGTAAGGACGACA    TAAAAGACCGGCTCT TCCGAG AGAGCCGGTCTTTTT     GCGTTTAATGTGATT 100 30
LT978_RS02240  433030 ..  433052 -  -4.7  -5.66684   TAAGGCACAAAAAAA           GGCTGGATG ATTAA CGTCCGGCC           TTTTTTATGATTATA  85 36
LT978_RS02225  430520 ..  430532 -  -7.7  -2.71144   CAGTTCGCTGAATCA                GCTGA AAA TCAGC                AAAACCGGAACGCTG  58 373
LT978_RS02200 NONE
LT978_RS02195  425600 ..  425618 - -17.4   -5.7946   GGCCGAATAAAAAAA             GCCGGGGG CTG CCCCCGGC             TTTTTGTCATATCAG 100 37
LT978_RS02175 NONE
LT978_RS02170  420180 ..  420206 -  -8.7  -5.31456   TGAAGCGAGAAAAAA        CGCCCGG-GATA TTTC TGTCTCCGGGCG         TTCTGTCTGTTTATA 100 36
LT978_RS02160  418239 ..  418262 - -13.2  -5.14985   CCAAACATACAAAAA          CCGGCAGTCTG TGA CAGAC-GCCGG          CTTTTTTTTATATAT 100 33
LT978_RS02145 NONE
LT978_RS02140  415766 ..  415786 -  -7.6  -5.14563   TGCTTTATTAAAAAA            GAGCTGAC GCGCG ATCAGCTC            TTTTTGTCATTCAAA  89 32
         cls  413633 ..  413654 - -14.5  -4.50976   TTTTATATCAGAAAA           TTCCCGGGA AACA TCCCGGGAA            TTACAAAATCGGCGA 100 26
LT978_RS02125  413103 ..  413123 -    -9  -5.64873   CGGAATAAGAAAAAA           TCCCGGGCG GATG CGCC-GGGA            TTTTCCTTTTTAATA 100 35
        xynA  411707 ..  411730 - -11.2  -2.62668   TATGATGTAATGAAT          CATCTCTTTT GTTA AAAAGAGATG           GGTTCATGCCGCTAG  78 391
LT978_RS02035  397756 ..  397785 - -13.7  -5.40004   CAGGAAACTAAAAAA       GAATCCTTCTCGG CTGT CTGAGAAGGATTC        TTTTTCTATATTAAC 100 36
LT978_RS01940  382711 ..  382736 - -16.9  -5.20216   CACATCATGAAAAAA         GCCCGCCG-GTG ACG CACACGGCGGGC         TTTTGTTACAATGGA 100 330
LT978_RS01920 NONE
        racA  379572 ..  379600 - -14.7  -2.59564   CGCTGACTGCATAAT        GAAAAGCTCCCTG TTT CAGGGAGCTTTTT        TGATTAGAATTGAAA 100 29
LT978_RS01855  368374 ..  368401 - -10.6  -5.87996   GAAGTAATAAAAAAA        GACTTGCCTCCT TTAA AAGCGGCAAGTC         TTTTTTCTGCATCAG 100 37
         cls NONE
        uvsE NONE
LT978_RS01825  360941 ..  360979 -    -8   -4.8143   TGAATAATGGAAAAA   GGATAGACGAGCGGGGGC CGG GCAGCCTCCTGTCTATCC   TTTTTTTATGTAGTC  84 46
LT978_RS01780  348829 ..  348848 - -10.8  -5.47821   ATTGACTGAAAAAAA            CAAGGACA GCGG TGTCCTTG             TTTTTCAGCTTGTGA 100 30
LT978_RS01755 NONE
LT978_RS01750  343007 ..  343032 -    -9  -5.36441   TGTTTATATAAAAAA         CGGCTTGCAG TTTAAC CTGCAAGCCT          AAAAGTAATTATCAT 100 41
LT978_RS01745 NONE
LT978_RS01740  342162 ..  342193 - -18.2  -3.86897   CTTATTTCGTACAAA      GAAAGCCGGACCAT ATGT ATGATCCGGCTTTC       TTTGGTACTGAAACA 100 261
LT978_RS01730 NONE
LT978_RS01725  340681 ..  340693 -  -3.4  -5.61881   CCGTAAAAATAAAAA                CTGA GATTG TCAG                GTAGTTCAAATTTGT  81 516
LT978_RS01705  336148 ..  336170 - -14.1  -3.16668   GAAGACGCGGATTAA           GCCCGGCGC GCAAT GCACCGGGC           TCAGTCTTTTTTGCC  95 26
LT978_RS01685  334051 ..  334075 -  -9.3  -3.91488   AAGGTTGTGAAATAA         GCCGGC-CTG ACATAG CAGCGCCGGC          CATTATCAAGGATTA  81 38
LT978_RS01675  331830 ..  331854 -  -9.3  -5.14563   TTTTTTATGAAAAAA         CCAGGC-CGC GATGAA GCGGGCCTGG          TTTTGTTTATTGTCT  91 32
LT978_RS01655  328557 ..  328583 -  -4.4  -4.72486   GACAAATGGCAAAAA         CCCCTTTTTCCA TGA CAAGAAAAGGGG         TTTTTTGCGTTATTC  71 35
LT978_RS01650 NONE
LT978_RS01645  327422 ..  327442 -  -4.6  -2.68003   AAAACCGAAGAACAT            GCTTCCGA TCAGG CCGGCAGC            GATTAAAATGAGAGC  47 45
LT978_RS01640 NONE
LT978_RS01635  325402 ..  325416 -  -4.3  -3.64703   CTTCGGTTATTTAAA               TCCAT TAGCG ATGGA               CCAAGGGGCGGTCAG  55 103
LT978_RS01600  319679 ..  319700 - -10.1  -4.14392   CTGTAATCCGCAAAA           GCCGGTCTT TACG AGGACCGGC            TTTTTTTATAGAAAG  85 31
LT978_RS01590  317648 ..  317664 - -10.8  -5.72622   CTGACAAAGAAAAAA              CCCGCC GGACA GGCGGG              TGGGTGTTACACGTG 100 32
LT978_RS01585  316745 ..  316765 - -15.5  -4.35483   CTTCATTACAAGAAA            CATCCCGCT GAG AGCGGGATG            TTTTTATTATATGCT 100 32
LT978_RS01545  308008 ..  308030 -    -9  -5.88565   CGGATAAGAAAAAAA           GCCCTTCGCT TAA AGCGGCGGGC           TTTACTTTGTTTTCC 100 27
        gerQ  289887 ..  289915 -  -5.4  -6.02919   TTATAAAGAAAAAAA       GCCAATC-CTC TGTCAAGT GAGCGATTGGC        TTTTTGATTTATCTC 100 34
LT978_RS01415  283504 ..  283525 - -11.6  -4.32035   AAAAAAATGAAATAA           TCCCCCTC GATCAT GAGGGGGA            TATTTATTTTATTTT  93 34
LT978_RS01385  275993 ..  276014 - -12.3  -4.62622   TTAATCAGAAAGAAA           CCCTGCTGA TGCT CCAGCAGGG            TTGTTCGGTTATTCA 100 34
        ywcE  271523 ..  271554 - -11.7  -5.15167   CATCAGGAATAAAAA      GAAACCCTCTTCG TTCAGG CGAAGAGGGTTTT       TTGTGCCTTTATTGG 100 34
LT978_RS01335  266800 ..  266823 - -12.4   -5.0538   CTCTACCGGAAAAAA          GCCCCATCCC ATAA GGGACGAGGC           TTTTTTTTATCCTCT 100 32
LT978_RS01310  263424 ..  263450 -    -5  -3.17273   CATATAGTAAAAGGA         TCCGCCTGTAAT CTT ACCGCTGGCGGA         TGGTGTTTTTCATTG  52 12
LT978_RS01305  262522 ..  262543 -  -2.3  -3.61175   CACAGACGACAAACA           GAAATGAAT GTGA ATCCATTAC            ATGCTCCTCTCGGCC  48 22
LT978_RS01300  261854 ..  261878 -  -6.4  -4.75404   AAACGTTAGTAAAAA         GCCCTCTTTGC ATCA GCGA-GAGGGC          TTTGCCATATAGTGT  79 13
LT978_RS01265 NONE
LT978_RS01260  255917 ..  255938 -    -8  -5.63103   GGCCAACTAAAAAAA           GACCGCTC TGTAAG GAGCAGTC            TTTTATGACATAAAC 100 28
LT978_RS01255  255590 ..  255609 -  -7.1  -6.25578   ATTAAAGAAAAAAAA            GCCGG-GC GTGAA GCTCCGGC            TTTTTTCTATTCAAT 100 32
LT978_RS01250  254547 ..  254559 -  -2.7  -4.15543   GAAAGAGGGGGAAAA                GAAAA CCC TCTTC                CATCGCTTTAATACG  55 164
LT978_RS01240  252816 ..  252853 - -16.5  -4.39329   ACGTCACAGAAGAAA   CATAAAAAAAACGGGCG CTTT CGCCCGTTTTTTTAACG    CTGGAAAAATTCGAT 100 20
LT978_RS01230  249547 ..  249578 - -11.7   -4.2558   CAGGTGTGATGAAAA      CGCTTGTGAAACCG TTGAC CGGCT-CACAAGCG      TTTTTTTTATTATTT  93 35
LT978_RS01210 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD  241924 ..  241946 -  -9.8  -5.06585   CAAATCACATAAAAA           GCAGGGGAGA GAA TGCCCCCTGC           GTGTTCGTTTTTACG  93 60
LT978_RS01185  240680 ..  240697 -  -8.4  -5.56568   AGAGCAGTAAAAAAA             CCCGGA TTCGCT TCCGGG              TTTTTTGCTTATTTT 100 34
LT978_RS01150 NONE
LT978_RS01145 NONE
LT978_RS01140  231128 ..  231156 -  -9.6  -5.80817   GGCAATATAAAAAAA        GCTGGTCTTGCA CTTTT TGCAAAACCGGC        TCATGTTTATTTTTG 100 32
LT978_RS01135 NONE
LT978_RS01130  229364 ..  229387 -  -8.3  -5.71712   TTTGACACAAAAAAA          CCTTTTAAG ATTCAA CTTAAAAGG           TTTTTCATCTCAAGC 100 35
LT978_RS01125 NONE
LT978_RS01120 NONE
        celB NONE
LT978_RS01110 NONE
LT978_RS01105 NONE
        manA NONE
LT978_RS01095  222884 ..  222896 -  -6.2  -4.18506   CGATTTTCAAAAGAA                GCGG TTATT CCGC                GATCGGCGTCAAGGA  68 17
        katX  221170 ..  221187 -    -7  -5.78622   TTAGCTCAAAAAAAA             CAGGAC GCGATT GTCCTG              TTTTTTTATTTAATA 100 35
LT978_RS01080  218491 ..  218513 -  -9.1  -5.12172   TATGAATAAAGAAAA           GGCGTCTTC ATAGG GAAGGCGCC           TCTTTTTGTTTTAAC  91 10
LT978_RS01050  209850 ..  209869 -   -15  -3.36839   TGATGAAATAACAGA            GCCTCCGC ATAT GCGGAGGC             TTTTTTTCAGTTTAA 100 37
LT978_RS01025  204697 ..  204721 -  -8.6  -4.86385   AGGTGTAAAAAGAAA          GAGACCTTCA AATGA TGAGGGTCTC          TTTTGTTATGATGAT  91 40
        pepT  202209 ..  202227 -  -8.9  -5.95539   TGTGAAAGAAAAAAA             CCAAAGC AGGGG GCTTTGG             TTTTAAGCGCGCTCT 100 28
LT978_RS01010  201391 ..  201420 -  -5.9  -5.71712   TGGTACATAAAAAAA       CTCCTTTTTTATGT TGT ACG-AAAAAAGGAG       GCGGAAGGTTTCATA 100 91
LT978_RS01005  200694 ..  200716 - -12.1  -5.88197   TGAAATATAAAAAAA           CTCTTCCCT CGGAT AGGGAAGAG           CTTGCGTCCGCAAAT 100 216
LT978_RS01000  199497 ..  199515 - -10.3  -4.78848   TCTGTAAACAGAAAA             GACACGC TGATC GCGTGTC             TTTTTTTATTTCCAG  91 31
LT978_RS00990  196770 ..  196800 - -12.6  -6.13503   TATCAATAAAAAAAA       GCGATATCACTCCA AAA CGGAGCGGTATCGC       TTTTTTTCTTTTACC 100 36
        citH  191852 ..  191873 - -13.1  -4.58076   ATAATGTACAGAAAA           GGATTTCCG CCAG CGGAAATCC            TTTTTTAATTAAAAC 100 34
LT978_RS00955  188606 ..  188630 -  -8.6  -6.08342   CAAGAAATAAAAAAA          GAAAGCCTGC CGCGC GCAGGCTTTT          TTTACGCCGTTTCCT 100 27
LT978_RS00850  166311 ..  166322 -    -3  -5.21236   AATTGATAACAAAAA                TATG AATA CATA                 CCTAAGAAAAAACGA  73 433
        hutP  164008 ..  164046 -  -9.8  -4.96848   GCGCCCATACAAAAA  GGAGCTATGCCATGAAA ATGATA TTTCACG-CATAGCCCC   CTATCATCTGATATC  93 52
        hutH NONE
        hutU NONE
        hutI  159502 ..  159516 -  -3.4  -3.09015   CGGATACTTATCCAA               GAGCGG CTC CCTCCC               TTGAAACGACCGTCT  46 3
        hutG NONE
LT978_RS00810  157032 ..  157056 - -10.8  -5.55695   GAATAAGACAAAAAA          GGCACATACC TCATC AGTATGTGCC          TTTTTTTATGGCATG 100 31
LT978_RS00770  150282 ..  150326 -  -8.7  -2.91383   ACCTGTATGTACAGA GCGGAATACAAGGCTCG GGATGGCCTGT CGAGCTTTGTATTCCGG CCCTTTTTCTCAGAA  69 35
LT978_RS00765  149767 ..  149803 - -13.3   -5.1104   AAACAGAGATAAAAA   CAAATGACAAAGC-CG GTATCT CGCGCTTTGTCATTTG    CATGACCGGCCTATT 100 36
LT978_RS00755  148249 ..  148272 - -12.5  -4.88228   AGTGAACATGAAAAA          CGGCACAGT GTCATG ACTGTGCCG           CTTTTTTTATTTTTT 100 32
LT978_RS00675 NONE
LT978_RS00670  129828 ..  129849 - -10.9  -5.90231   ATAAACATAAAAAAA           CACGCCCTT TCAA AAAGGCGTG            TTATTTTTCTTAGGA 100 35
LT978_RS00665  128317 ..  128341 - -15.8  -4.63527   GTATGACGCCAAAAA          GGAATCGCCC AGCGG GGGCGATTCC          TTTTTTGATTACAGT 100 34
LT978_RS00650  124984 ..  125006 -  -9.1  -4.58773   CCGATCAAAGGAAAA           GGGCTGGTT TAAGT AACCCGCCC           TCAGCTTGTTCAGCC  86 76
LT978_RS00625  119205 ..  119243 - -14.3  -5.40072   TTCGGGGCAAAAAAA  TAATAAAAAAGAATCCGC GCAC GCGGATTCTTTTTT-TTA   TTTAGAGGCTTGAAT 100 23
LT978_RS00610 NONE
LT978_RS00605 NONE
LT978_RS00600  115179 ..  115201 -  -9.8  -5.24531   AGCCGTCATAAAAAA           GCCCGGGC TCAAAAG GCCCGGAC           TTGGGGACATTATTT 100 35
        ahpC  113614 ..  113625 -  -2.2  -2.57136   GCATCAAGTACCAAT                GGAA TGCA CTCC                 TTAGATTTTACCTAC  40 26
        ahpF  112056 ..  112075 - -13.6   -5.1287   TTCATATTTAAAAAA            GCCGCCAT ATGA ATGGCGGC             TTTTACATTAATTCC 100 33
LT978_RS00570  106837 ..  106862 - -12.7  -5.47399   GCAACCGTAAAAAAA         GAGCTCAGAGA ATTA TCTCTGAACTC          CATATTCTTCACTTC 100 34
LT978_RS00475   88073 ..   88093 -  -9.7  -4.25848   AAGCTGTCATGAAAA            GAGGCCC GCACGCT GGGCCTC            TTTTGTTATTCATCT  86 31
LT978_RS00435   79626 ..   79645 - -13.6  -4.19648   CAGATATAAACGAAA            GGCTGAGG AGCA CCTCAGCC             TTTTTTTGTATGGAT 100 41
LT978_RS00330   59765 ..   59800 -   -20  -3.05463   ATCCGTTTCATCGAA    TAAGAAAAGCCCTCGC ACGG GCGAAGGCTTTTCTTA     AAAGGAACGTTCCTC 100 23
LT978_RS00320   59242 ..   59268 - -13.1  -5.08824   TCTTCATGGAAAAAA        GAGGCGGAAAGC CATC GCTT-CCGCCTC         CCGCACATATATATG 100 53
LT978_RS00265   48154 ..   48180 - -10.2  -4.31587   GCTCAAAAATAAGAA         GCAGCAAAGGAT TAA ATTCCTTGCTGC         TTTTTTTTATTTCAT  86 32
LT978_RS00255   46614 ..   46636 - -16.3  -6.00086   AGAGCAGAAAAAAAA           CACCCCGGC TGGTT GCCGGGGTG           TTTTGGTTATTCTGC 100 32
LT978_RS00250   45524 ..   45542 -  -8.9  -5.14563   GGCCCTAGGAAAAAA             CCTCTCT AAAAA AGAGAGG             TTATTTTTTCTTGAT  91 26
LT978_RS00245   43733 ..   43761 - -11.2   -5.0065   TATTGAGAAATAAAA        GAAAATGCCAAT GAAGT ATCGGCATTTTC        TTTTTGTTGTTATTA  93 38
LT978_RS00240 NONE
LT978_RS00235   41335 ..   41359 - -15.1  -4.46652   TAAACAAAAAGTAAA          CAAGACAGCCA ACG CGGCTGTCTTG          TGATATCCGTAAAAA 100 77
LT978_RS00190   34619 ..   34649 - -14.3  -2.78384   TTTCGGCTGATCATA       TGTAAAAGCGATT ATATG AATCGCTTTTACA       TACTTAGAAACATGC  95 40
LT978_RS00175   32011 ..   32027 - -10.8  -5.31877   ATGCAGGATAAAAAA              GCCGCC AACAG GGCGGC              TTTTCTTAAGTTAAT 100 165
LT978_RS00165   28676 ..   28697 -  -6.5  -3.05521   ATGACACGTCGAATA           GCCGATGCT GACA AGAACCGGC            TTGTTTAAGCGTTTC  60 305
LT978_RS00155   27660 ..   27678 -  -9.6  -5.20328   TTTTAAAAAAATAAA             CTCTCCAG TAA CTAGAGAG             TCAAGGGATTATTTA 100 34
LT978_RS00150   26642 ..   26659 -  -4.9  -3.69482   GTACCCAATAGATAA             GAGAACA GGTT TATTCTC              TCGTTTCGCTTTTTC  57 295
LT978_RS00140   24690 ..   24715 - -11.2  -5.42198   TGTGAAAAAAGAAAA         GCAGCAG-GCC GCCTA GGCTCTGCTGC         TGATTTGTAAGATGT 100 12
LT978_RS00130   22235 ..   22252 - -12.7  -3.08706   AATCACAGTGTAACA             GTGCGGG GGAA CCCGCAC              TGTTTTATTGATTAA  91 37
LT978_RS20025   14169 ..   14186 -  -4.1  -3.39328   AAGCTGAAAAAAGTA             CTCGTCA AGCA TGAGGAG              CCTACATCATAAGGG  51 108
LT978_RS20020 NONE
LT978_RS20015 NONE
        lepB NONE
LT978_RS00065   12224 ..   12251 -  -5.6  -5.36441   GCGGGATAGAAAAAA        GAACCCAGAGCA GTTA TTCTCTAAGTTC         ATGAAAGAAATAAGA  83 24
        yyaC NONE
LT978_RS20005   10434 ..   10447 -  -3.9  -3.84346   AGAGGTAAAGAAATA               CTTTA GAGA TAAAG                TGTATCAAACCATTA  57 285
LT978_RS19995    9047 ..    9062 -  -5.4  -2.79518   TGAAAACCTGCAAAG              GGAAGA ATTG TCCTCC               ATTGAGGAAGCTCAT  52 128
LT978_RS19975    5566 ..    5584 -  -8.9  -3.05963   ACCTTGAGGCTAAGA             TTGACGC TGAGC GCGTCAA             GGAACTGGCGAAAGG  70 147
LT978_RS19970 NONE
LT978_RS19965    4492 ..    4502 -  -2.6  -3.86822   TAATTTTGGCATAAA                 TAAA TTT TTTA                 TATAGATGGAAACAG  51 101
        lepB    3869 ..    3885 -  -8.1  -4.44914   TACGGAAGAAAACAA              GAAAACA GTC TGTTTTC              ACATTAAAGGTGAAA  83 70
LT978_RS19955    1639 ..    1661 -   -10  -3.51545   GAAAACAATCCACAA           CTTATCCACA ATT TGTGGATAAA           GAGAATGGACTGGAT  79 508
LT978_RS19945     218 ..     242 -  -2.1  -3.53012   GTCTCTCCCGCCAAA          TTCTTCCCCGA TTT TAGGCAAAGAA          GAATCCGTCATTTCT   0 388
