locus-tag class description J4048_RS00005 PF00308 Bacterial dnaA protein J4048_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix J4048_RS00005 PF11638 DnaA N-terminal domain J4048_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4048_RS00010 PF02767 DNA polymerase III beta subunit, central domain J4048_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4048_RS00020 PF02463 RecF/RecN/SMC N terminal domain J4048_RS00025 PF04025 Domain of unknown function (DUF370) J4048_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS00030 PF01751 Toprim domain J4048_RS00030 PF00204 DNA gyrase B J4048_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus J4048_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller J4048_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A J4048_RS00065 PF14175 YaaC-like Protein J4048_RS00070 PF00571 CBS domain J4048_RS00070 PF00478 IMP dehydrogenase / GMP reductase domain J4048_RS00075 PF07943 Penicillin-binding protein 5, C-terminal domain J4048_RS00075 PF00768 D-alanyl-D-alanine carboxypeptidase J4048_RS00080 PF01680 SOR/SNZ family J4048_RS00085 PF01174 SNO glutamine amidotransferase family J4048_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4048_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain J4048_RS00095 PF02595 Glycerate kinase family J4048_RS00105 PF01712 Deoxynucleoside kinase J4048_RS00110 PF01712 Deoxynucleoside kinase J4048_RS00115 PF00704 Glycosyl hydrolases family 18 J4048_RS00115 PF01476 LysM domain J4048_RS00120 PF00857 Isochorismatase family J4048_RS00125 PF14437 MafB19-like deaminase J4048_RS00135 PF12169 DNA polymerase III subunits gamma and tau domain III J4048_RS00140 PF02575 YbaB/EbfC DNA-binding family J4048_RS00145 PF02132 RecR protein J4048_RS00145 PF13662 Toprim domain J4048_RS00150 PF10704 Protein of unknown function (DUF2508) J4048_RS00155 PF07441 SigmaK-factor processing regulatory protein BofA J4048_RS00185 PF10764 Inhibitor of sigma-G Gin J4048_RS00190 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein J4048_RS00195 PF05816 Toxic anion resistance protein (TelA) J4048_RS00200 PF01276 Orn/Lys/Arg decarboxylase, major domain J4048_RS00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4048_RS00205 PF02223 Thymidylate kinase J4048_RS00210 PF06153 Cyclic-di-AMP receptor J4048_RS00215 PF03885 Protein of unknown function (DUF327) J4048_RS00220 PF09115 DNA polymerase III, delta subunit, C terminal J4048_RS00225 PF04468 PSP1 C-terminal conserved region J4048_RS00230 PF06156 Initiation control protein YabA J4048_RS00235 PF05175 Methyltransferase small domain J4048_RS00240 PF01541 GIY-YIG catalytic domain J4048_RS00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4048_RS00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4048_RS00250 PF18277 AbrB C-terminal domain J4048_RS00255 PF08264 Anticodon-binding domain of tRNA J4048_RS00255 PF09334 tRNA synthetases class I (M) J4048_RS00255 PF01588 Putative tRNA binding domain J4048_RS00260 PF01026 TatD related DNase J4048_RS00265 PF06725 3D domain J4048_RS00265 PF03990 G5-linked-Ubiquitin-like domain J4048_RS00265 PF07501 G5 domain J4048_RS00270 PF13331 Domain of unknown function (DUF4093) J4048_RS00270 PF13662 Toprim domain J4048_RS00275 PF00398 Ribosomal RNA adenine dimethylase J4048_RS00280 PF05582 YabG peptidase U57 J4048_RS00285 PF06257 Biofilm formation stimulator VEG J4048_RS00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4048_RS00295 PF08544 GHMP kinases C terminal J4048_RS00295 PF00288 GHMP kinases N terminal domain J4048_RS00300 PF00156 Phosphoribosyl transferase domain J4048_RS00300 PF09182 Bacterial purine repressor, N-terminal J4048_RS00305 PF01042 Endoribonuclease L-PSP J4048_RS00310 PF04026 SpoVG J4048_RS00315 PF00132 Bacterial transferase hexapeptide (six repeats) J4048_RS00315 PF00483 Nucleotidyl transferase J4048_RS00320 PF14572 Phosphoribosyl synthetase-associated domain J4048_RS00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4048_RS00325 PF01386 Ribosomal L25p family J4048_RS00325 PF14693 Ribosomal protein TL5, C-terminal domain J4048_RS00330 PF01195 Peptidyl-tRNA hydrolase J4048_RS00335 PF10955 Protein of unknown function (DUF2757) J4048_RS00340 PF02559 CarD-like/TRCF domain J4048_RS00340 PF00270 DEAD/DEAH box helicase J4048_RS00340 PF00271 Helicase conserved C-terminal domain J4048_RS00340 PF03461 TRCF domain J4048_RS00340 PF17757 UvrB interaction domain J4048_RS00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4048_RS00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor J4048_RS00350 PF01943 Polysaccharide biosynthesis protein J4048_RS00350 PF14667 Polysaccharide biosynthesis C-terminal domain J4048_RS00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4048_RS00355 PF03819 MazG nucleotide pyrophosphohydrolase domain J4048_RS00360 PF01479 S4 domain J4048_RS00365 PF07873 YabP family J4048_RS00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) J4048_RS00375 PF04977 Septum formation initiator J4048_RS00380 PF00575 S1 RNA binding domain J4048_RS00395 PF07228 Stage II sporulation protein E (SpoIIE) J4048_RS00400 PF00092 von Willebrand factor type A domain J4048_RS00405 PF00069 Protein kinase domain J4048_RS00410 PF11734 TilS substrate C-terminal domain J4048_RS00410 PF01171 PP-loop family J4048_RS00410 PF09179 TilS substrate binding domain J4048_RS00415 PF00156 Phosphoribosyl transferase domain J4048_RS00420 PF01434 Peptidase family M41 J4048_RS00420 PF06480 FtsH Extracellular J4048_RS00420 PF17862 AAA+ lid domain J4048_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS00425 PF03309 Type III pantothenate kinase J4048_RS00430 PF01430 Hsp33 protein J4048_RS00435 PF13145 PPIC-type PPIASE domain J4048_RS00440 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS00445 PF04715 Anthranilate synthase component I, N terminal region J4048_RS00445 PF00425 chorismate binding enzyme J4048_RS00450 PF00117 Glutamine amidotransferase class-I J4048_RS00455 PF01063 Amino-transferase class IV J4048_RS00460 PF00809 Pterin binding enzyme J4048_RS00465 PF02152 Dihydroneopterin aldolase J4048_RS00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4048_RS00475 PF01381 Helix-turn-helix J4048_RS00480 PF01207 Dihydrouridine synthase (Dus) J4048_RS00485 PF00152 tRNA synthetases class II (D, K and N) J4048_RS00485 PF01336 OB-fold nucleic acid binding domain J4048_RS00565 PF05848 CtsR N-terminal HTH domain J4048_RS00565 PF17727 CtsR C-terminal dimerization domain J4048_RS00570 PF02151 UvrB/uvrC motif J4048_RS00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain J4048_RS00580 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS00580 PF07724 AAA domain (Cdc48 subfamily) J4048_RS00580 PF17871 AAA lid domain J4048_RS00580 PF02861 Clp amino terminal domain, pathogenicity island component J4048_RS00580 PF10431 C-terminal, D2-small domain, of ClpB protein J4048_RS00585 PF18073 Rubredoxin metal binding domain J4048_RS00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4048_RS00590 PF10635 DisA bacterial checkpoint controller linker region J4048_RS00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4048_RS00605 PF02542 YgbB family J4048_RS00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4048_RS00615 PF00132 Bacterial transferase hexapeptide (six repeats) J4048_RS00615 PF06426 Serine acetyltransferase, N-terminal J4048_RS00620 PF09190 DALR domain J4048_RS00620 PF01406 tRNA synthetases class I (C) catalytic domain J4048_RS00625 PF00636 Ribonuclease III domain J4048_RS00630 PF00588 SpoU rRNA Methylase family J4048_RS00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4048_RS00635 PF05991 YacP-like NYN domain J4048_RS00640 PF04542 Sigma-70 region 2 J4048_RS00640 PF08281 Sigma-70, region 4 J4048_RS00645 PF00471 Ribosomal protein L33 J4048_RS00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4048_RS00655 PF00467 KOW motif J4048_RS00655 PF02357 Transcription termination factor nusG J4048_RS00660 PF00298 Ribosomal protein L11, RNA binding domain J4048_RS00660 PF03946 Ribosomal protein L11, N-terminal domain J4048_RS00665 PF00687 Ribosomal protein L1p/L10e family J4048_RS00670 PF00466 Ribosomal protein L10 J4048_RS00675 PF00542 Ribosomal protein L7/L12 C-terminal domain J4048_RS00675 PF16320 Ribosomal protein L7/L12 dimerisation domain J4048_RS00680 PF05175 Methyltransferase small domain J4048_RS00685 PF04563 RNA polymerase beta subunit J4048_RS00685 PF04561 RNA polymerase Rpb2, domain 2 J4048_RS00685 PF04565 RNA polymerase Rpb2, domain 3 J4048_RS00685 PF10385 RNA polymerase beta subunit external 1 domain J4048_RS00685 PF00562 RNA polymerase Rpb2, domain 6 J4048_RS00685 PF04560 RNA polymerase Rpb2, domain 7 J4048_RS00690 PF04997 RNA polymerase Rpb1, domain 1 J4048_RS00690 PF00623 RNA polymerase Rpb1, domain 2 J4048_RS00690 PF04983 RNA polymerase Rpb1, domain 3 J4048_RS00690 PF05000 RNA polymerase Rpb1, domain 4 J4048_RS00690 PF04998 RNA polymerase Rpb1, domain 5 J4048_RS00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J4048_RS00700 PF00164 Ribosomal protein S12/S23 J4048_RS00705 PF00177 Ribosomal protein S7p/S5e J4048_RS00710 PF00679 Elongation factor G C-terminus J4048_RS00710 PF14492 Elongation Factor G, domain II J4048_RS00710 PF03764 Elongation factor G, domain IV J4048_RS00710 PF00009 Elongation factor Tu GTP binding domain J4048_RS00710 PF03144 Elongation factor Tu domain 2 J4048_RS00715 PF00009 Elongation factor Tu GTP binding domain J4048_RS00715 PF03144 Elongation factor Tu domain 2 J4048_RS00715 PF03143 Elongation factor Tu C-terminal domain J4048_RS00720 PF12146 Serine aminopeptidase, S33 J4048_RS00725 PF00338 Ribosomal protein S10p/S20e J4048_RS00730 PF00297 Ribosomal protein L3 J4048_RS00735 PF00573 Ribosomal protein L4/L1 family J4048_RS00740 PF00276 Ribosomal protein L23 J4048_RS00745 PF00181 Ribosomal Proteins L2, RNA binding domain J4048_RS00745 PF03947 Ribosomal Proteins L2, C-terminal domain J4048_RS00750 PF00203 Ribosomal protein S19 J4048_RS00755 PF00237 Ribosomal protein L22p/L17e J4048_RS00760 PF07650 KH domain J4048_RS00760 PF00189 Ribosomal protein S3, C-terminal domain J4048_RS00765 PF00252 Ribosomal protein L16p/L10e J4048_RS00770 PF00831 Ribosomal L29 protein J4048_RS00775 PF00366 Ribosomal protein S17 J4048_RS00780 PF00238 Ribosomal protein L14p/L23e J4048_RS00785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4048_RS00785 PF00467 KOW motif J4048_RS00790 PF00281 Ribosomal protein L5 J4048_RS00790 PF00673 ribosomal L5P family C-terminus J4048_RS00795 PF00253 Ribosomal protein S14p/S29e J4048_RS00800 PF00410 Ribosomal protein S8 J4048_RS00805 PF00347 Ribosomal protein L6 J4048_RS00810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4048_RS00815 PF00333 Ribosomal protein S5, N-terminal domain J4048_RS00815 PF03719 Ribosomal protein S5, C-terminal domain J4048_RS00820 PF00327 Ribosomal protein L30p/L7e J4048_RS00825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4048_RS00830 PF00344 SecY translocase J4048_RS00835 PF05191 Adenylate kinase, active site lid J4048_RS00840 PF00557 Metallopeptidase family M24 J4048_RS00845 PF01176 Translation initiation factor 1A / IF-1 J4048_RS00850 PF00444 Ribosomal protein L36 J4048_RS00855 PF00416 Ribosomal protein S13/S18 J4048_RS00860 PF00411 Ribosomal protein S11 J4048_RS00865 PF01000 RNA polymerase Rpb3/RpoA insert domain J4048_RS00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4048_RS00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4048_RS00870 PF01196 Ribosomal protein L17 J4048_RS00875 PF00005 ABC transporter J4048_RS00880 PF00005 ABC transporter J4048_RS00885 PF02361 Cobalt transport protein J4048_RS00890 PF01416 tRNA pseudouridine synthase J4048_RS00895 PF00572 Ribosomal protein L13 J4048_RS00900 PF00380 Ribosomal protein S9/S16 J4048_RS00905 PF08241 Methyltransferase domain J4048_RS00910 PF05163 DinB family J4048_RS00915 PF10730 Protein of unknown function (DUF2521) J4048_RS00920 PF01520 N-acetylmuramoyl-L-alanine amidase J4048_RS00925 PF10609 NUBPL iron-transfer P-loop NTPase J4048_RS00930 PF17898 Spore germination GerD central core domain J4048_RS00935 PF14089 KinB-signalling pathway activation in sporulation J4048_RS00940 PF01522 Polysaccharide deacetylase J4048_RS01005 PF00202 Aminotransferase class-III J4048_RS01015 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS01015 PF00107 Zinc-binding dehydrogenase J4048_RS01020 PF01740 STAS domain J4048_RS01020 PF00916 Sulfate permease family J4048_RS01025 PF01758 Sodium Bile acid symporter family J4048_RS01030 PF00756 Putative esterase J4048_RS01035 PF01032 FecCD transport family J4048_RS01040 PF01032 FecCD transport family J4048_RS01045 PF01497 Periplasmic binding protein J4048_RS01050 PF12833 Helix-turn-helix domain J4048_RS01050 PF01497 Periplasmic binding protein J4048_RS01055 PF07075 Protein of unknown function (DUF1343) J4048_RS01060 PF00933 Glycosyl hydrolase family 3 N terminal domain J4048_RS01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4048_RS01065 PF00144 Beta-lactamase J4048_RS01070 PF00367 phosphotransferase system, EIIB J4048_RS01070 PF02378 Phosphotransferase system, EIIC J4048_RS01075 PF01380 SIS domain J4048_RS01085 PF04463 Protein of unknown function (DUF523) J4048_RS01115 PF04542 Sigma-70 region 2 J4048_RS01115 PF08281 Sigma-70, region 4 J4048_RS01120 PF13490 Putative zinc-finger J4048_RS01125 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4048_RS01130 PF07949 YbbR-like protein J4048_RS01135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4048_RS01135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4048_RS01135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4048_RS01135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4048_RS01140 PF01380 SIS domain J4048_RS01145 PF00005 ABC transporter J4048_RS01160 PF16226 Domain of unknown function (DUF4885) J4048_RS01165 PF00248 Aldo/keto reductase family J4048_RS01170 PF04172 LrgB-like family J4048_RS01175 PF03788 LrgA family J4048_RS01180 PF01047 MarR family J4048_RS01185 PF00324 Amino acid permease J4048_RS01190 PF13419 Haloacid dehalogenase-like hydrolase J4048_RS01195 PF07730 Histidine kinase J4048_RS01200 PF00072 Response regulator receiver domain J4048_RS01200 PF00196 Bacterial regulatory proteins, luxR family J4048_RS01205 PF00005 ABC transporter J4048_RS01230 PF00975 Thioesterase domain J4048_RS01230 PF00550 Phosphopantetheine attachment site J4048_RS01230 PF00501 AMP-binding enzyme J4048_RS01230 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01230 PF00668 Condensation domain J4048_RS01235 PF00550 Phosphopantetheine attachment site J4048_RS01235 PF00668 Condensation domain J4048_RS01235 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01235 PF00501 AMP-binding enzyme J4048_RS01235 PF00975 Thioesterase domain J4048_RS01240 PF00501 AMP-binding enzyme J4048_RS01240 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01240 PF00668 Condensation domain J4048_RS01240 PF00550 Phosphopantetheine attachment site J4048_RS01240 PF00975 Thioesterase domain J4048_RS01245 PF00698 Acyl transferase domain J4048_RS01250 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS01250 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS01250 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS01250 PF08659 KR domain J4048_RS01250 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01250 PF00668 Condensation domain J4048_RS01250 PF00501 AMP-binding enzyme J4048_RS01250 PF14765 Polyketide synthase dehydratase J4048_RS01250 PF00550 Phosphopantetheine attachment site J4048_RS01255 PF08659 KR domain J4048_RS01255 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS01255 PF00501 AMP-binding enzyme J4048_RS01255 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01255 PF00668 Condensation domain J4048_RS01255 PF00550 Phosphopantetheine attachment site J4048_RS01255 PF14765 Polyketide synthase dehydratase J4048_RS01255 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS01255 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS01260 PF01593 Flavin containing amine oxidoreductase J4048_RS01265 PF00501 AMP-binding enzyme J4048_RS01265 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01265 PF00668 Condensation domain J4048_RS01265 PF00550 Phosphopantetheine attachment site J4048_RS01270 PF00891 O-methyltransferase domain J4048_RS01275 PF16219 Domain of unknown function (DUF4879) J4048_RS01280 PF17334 Minor curli fiber component A J4048_RS01295 PF13520 Amino acid permease J4048_RS01310 PF10852 Protein of unknown function (DUF2651) J4048_RS01315 PF03009 Glycerophosphoryl diester phosphodiesterase family J4048_RS01320 PF07690 Major Facilitator Superfamily J4048_RS01325 PF10852 Protein of unknown function (DUF2651) J4048_RS01330 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal J4048_RS01330 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal J4048_RS01340 PF01471 Putative peptidoglycan binding domain J4048_RS01340 PF08924 Domain of unknown function (DUF1906) J4048_RS01355 PF00465 Iron-containing alcohol dehydrogenase J4048_RS01360 PF02222 ATP-grasp domain J4048_RS01365 PF01066 CDP-alcohol phosphatidyltransferase J4048_RS01370 PF09335 SNARE associated Golgi protein J4048_RS01375 PF02666 Phosphatidylserine decarboxylase J4048_RS01385 PF00581 Rhodanese-like domain J4048_RS01385 PF12368 Rhodanase C-terminal J4048_RS01385 PF17773 UPF0176 acylphosphatase like domain J4048_RS01390 PF00375 Sodium:dicarboxylate symporter family J4048_RS01395 PF01063 Amino-transferase class IV J4048_RS01400 PF00324 Amino acid permease J4048_RS01405 PF02574 Homocysteine S-methyltransferase J4048_RS01410 PF01235 Sodium:alanine symporter family J4048_RS01415 PF04960 Glutaminase J4048_RS01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS01425 PF08664 YcbB domain J4048_RS01425 PF00072 Response regulator receiver domain J4048_RS01435 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein J4048_RS01440 PF01545 Cation efflux family J4048_RS01440 PF16916 Dimerisation domain of Zinc Transporter J4048_RS01445 PF00881 Nitroreductase family J4048_RS01450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS01455 PF07681 DoxX J4048_RS01460 PF00085 Thioredoxin J4048_RS01465 PF10710 Protein of unknown function (DUF2512) J4048_RS01470 PF07486 Cell Wall Hydrolase J4048_RS01475 PF09423 PhoD-like phosphatase J4048_RS01475 PF16655 PhoD-like phosphatase, N-terminal domain J4048_RS01480 PF02416 mttA/Hcf106 family J4048_RS01485 PF00902 Sec-independent protein translocase protein (TatC) J4048_RS01490 PF01470 Pyroglutamyl peptidase J4048_RS01495 PF00266 Aminotransferase class-V J4048_RS01500 PF07690 Major Facilitator Superfamily J4048_RS01505 PF00440 Bacterial regulatory proteins, tetR family J4048_RS01510 PF00710 Asparaginase, N-terminal J4048_RS01510 PF17763 Glutaminase/Asparaginase C-terminal domain J4048_RS01515 PF01674 Lipase (class 2) J4048_RS01520 PF05225 helix-turn-helix, Psq domain J4048_RS01520 PF02810 SEC-C motif J4048_RS01525 PF00248 Aldo/keto reductase family J4048_RS01530 PF11611 Domain of unknown function (DUF4352) J4048_RS01530 PF17118 Domain of unknown function (DUF5105) J4048_RS01535 PF16244 Domain of unknown function (DUF4901) J4048_RS01540 PF16244 Domain of unknown function (DUF4901) J4048_RS01545 PF13539 D-alanyl-D-alanine carboxypeptidase J4048_RS01550 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS01560 PF00128 Alpha amylase, catalytic domain J4048_RS01565 PF01297 Zinc-uptake complex component A periplasmic J4048_RS01570 PF00005 ABC transporter J4048_RS01575 PF00950 ABC 3 transport family J4048_RS01580 PF00296 Luciferase-like monooxygenase J4048_RS01585 PF02342 TerD domain J4048_RS01590 PF02342 TerD domain J4048_RS01595 PF02342 TerD domain J4048_RS01600 PF03741 Integral membrane protein TerC family J4048_RS01605 PF14266 Putative component of 'biosynthetic module' J4048_RS01610 PF05816 Toxic anion resistance protein (TelA) J4048_RS01615 PF07690 Major Facilitator Superfamily J4048_RS01620 PF00005 ABC transporter J4048_RS01620 PF00571 CBS domain J4048_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS01630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4048_RS01635 PF07687 Peptidase dimerisation domain J4048_RS01635 PF01546 Peptidase family M20/M25/M40 J4048_RS01640 PF03606 C4-dicarboxylate anaerobic carrier J4048_RS01650 PF00128 Alpha amylase, catalytic domain J4048_RS01650 PF16738 Starch-binding module 26 J4048_RS01655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4048_RS01655 PF00056 lactate/malate dehydrogenase, NAD binding domain J4048_RS01660 PF07690 Major Facilitator Superfamily J4048_RS01665 PF01047 MarR family J4048_RS01670 PF01810 LysE type translocator J4048_RS01675 PF08892 YqcI/YcgG family J4048_RS01680 PF00324 Amino acid permease J4048_RS01685 PF09347 Domain of unknown function (DUF1989) J4048_RS01690 PF02540 NAD synthase J4048_RS01695 PF12197 Bacillus cereus group antimicrobial protein J4048_RS01705 PF01261 Xylose isomerase-like TIM barrel J4048_RS01710 PF07690 Major Facilitator Superfamily J4048_RS01715 PF01202 Shikimate kinase J4048_RS01720 PF05448 Acetyl xylan esterase (AXE1) J4048_RS01725 PF10127 RNA repair pathway DNA polymerase beta family J4048_RS01730 PF01619 Proline dehydrogenase J4048_RS01735 PF00171 Aldehyde dehydrogenase family J4048_RS01740 PF00474 Sodium:solute symporter family J4048_RS01745 PF17853 GGDEF-like domain J4048_RS01745 PF13556 PucR C-terminal helix-turn-helix domain J4048_RS01750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS01755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4048_RS01760 PF00355 Rieske [2Fe-2S] domain J4048_RS01765 PF04324 BFD-like [2Fe-2S] binding domain J4048_RS01765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4048_RS01765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4048_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS01765 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4048_RS01770 PF01568 Molydopterin dinucleotide binding domain J4048_RS01770 PF00384 Molybdopterin oxidoreductase J4048_RS01770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4048_RS01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS01775 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4048_RS01775 PF04324 BFD-like [2Fe-2S] binding domain J4048_RS01775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4048_RS01780 PF07690 Major Facilitator Superfamily J4048_RS01785 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4048_RS01785 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4048_RS01790 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS01790 PF13823 Alcohol dehydrogenase GroES-associated J4048_RS01790 PF00107 Zinc-binding dehydrogenase J4048_RS01795 PF06271 RDD family J4048_RS01800 PF10925 Protein of unknown function (DUF2680) J4048_RS01805 PF00232 Glycosyl hydrolase family 1 J4048_RS01810 PF11033 Competence protein J (ComJ) J4048_RS01815 PF14040 Deoxyribonuclease NucA/NucB J4048_RS01820 PF01380 SIS domain J4048_RS01825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4048_RS01830 PF01638 HxlR-like helix-turn-helix J4048_RS01835 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01835 PF00668 Condensation domain J4048_RS01835 PF00550 Phosphopantetheine attachment site J4048_RS01835 PF00501 AMP-binding enzyme J4048_RS01840 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01840 PF00550 Phosphopantetheine attachment site J4048_RS01840 PF00668 Condensation domain J4048_RS01840 PF00501 AMP-binding enzyme J4048_RS01845 PF13193 AMP-binding enzyme C-terminal domain J4048_RS01845 PF00975 Thioesterase domain J4048_RS01845 PF00668 Condensation domain J4048_RS01845 PF00501 AMP-binding enzyme J4048_RS01845 PF00550 Phosphopantetheine attachment site J4048_RS01850 PF00975 Thioesterase domain J4048_RS01855 PF00155 Aminotransferase class I and II J4048_RS01855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4048_RS01855 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4048_RS01865 PF00892 EamA-like transporter family J4048_RS01870 PF00155 Aminotransferase class I and II J4048_RS01870 PF00392 Bacterial regulatory proteins, gntR family J4048_RS01875 PF01648 4'-phosphopantetheinyl transferase superfamily J4048_RS01885 PF00005 ABC transporter J4048_RS01890 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS01895 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS01900 PF03466 LysR substrate binding domain J4048_RS01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS01905 PF02441 Flavoprotein J4048_RS01910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4048_RS01925 PF00854 POT family J4048_RS01930 PF13229 Right handed beta helix region J4048_RS01930 PF12708 Pectate lyase superfamily protein J4048_RS01940 PF03323 Bacillus/Clostridium GerA spore germination protein J4048_RS01945 PF05504 Spore germination B3/ GerAC like, C-terminal J4048_RS01950 PF03845 Spore germination protein J4048_RS01955 PF00296 Luciferase-like monooxygenase J4048_RS01960 PF00583 Acetyltransferase (GNAT) family J4048_RS01965 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS01975 PF00005 ABC transporter J4048_RS01980 PF07687 Peptidase dimerisation domain J4048_RS01980 PF01546 Peptidase family M20/M25/M40 J4048_RS01985 PF03972 MmgE/PrpD family J4048_RS01990 PF00005 ABC transporter J4048_RS01995 PF02687 FtsX-like permease family J4048_RS01995 PF12704 MacB-like periplasmic core domain J4048_RS02000 PF00072 Response regulator receiver domain J4048_RS02000 PF00486 Transcriptional regulatory protein, C terminal J4048_RS02005 PF00672 HAMP domain J4048_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS02005 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS02010 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS02015 PF11131 Rap-phr extracellular signalling J4048_RS02020 PF09680 Family of unknown function J4048_RS02025 PF13840 ACT domain J4048_RS02025 PF00696 Amino acid kinase family J4048_RS02030 PF01032 FecCD transport family J4048_RS02035 PF01032 FecCD transport family J4048_RS02040 PF00005 ABC transporter J4048_RS02045 PF01497 Periplasmic binding protein J4048_RS02050 PF07690 Major Facilitator Superfamily J4048_RS02055 PF00440 Bacterial regulatory proteins, tetR family J4048_RS02060 PF00881 Nitroreductase family J4048_RS02065 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS02070 PF01022 Bacterial regulatory protein, arsR family J4048_RS02075 PF00392 Bacterial regulatory proteins, gntR family J4048_RS02075 PF00155 Aminotransferase class I and II J4048_RS02080 PF00202 Aminotransferase class-III J4048_RS02085 PF00171 Aldehyde dehydrogenase family J4048_RS02090 PF06800 Sugar transport protein J4048_RS02100 PF07987 Domain of unkown function (DUF1775) J4048_RS02105 PF13115 YtkA-like J4048_RS02105 PF04234 CopC domain J4048_RS02105 PF05425 Copper resistance protein D J4048_RS02110 PF08220 DeoR-like helix-turn-helix domain J4048_RS02110 PF05573 NosL J4048_RS02120 PF02378 Phosphotransferase system, EIIC J4048_RS02120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS02125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS02130 PF01232 Mannitol dehydrogenase Rossmann domain J4048_RS02130 PF08125 Mannitol dehydrogenase C-terminal domain J4048_RS02135 PF07977 FabA-like domain J4048_RS02150 PF03746 LamB/YcsF family J4048_RS02155 PF01566 Natural resistance-associated macrophage protein J4048_RS02160 PF07286 Protein of unknown function (DUF1445) J4048_RS02165 PF02682 Carboxyltransferase domain, subdomain C and D J4048_RS02170 PF02626 Carboxyltransferase domain, subdomain A and B J4048_RS02175 PF09339 IclR helix-turn-helix domain J4048_RS02175 PF01614 Bacterial transcriptional regulator J4048_RS02180 PF13472 GDSL-like Lipase/Acylhydrolase family J4048_RS02185 PF13129 Protein of unknown function (DUF3953) J4048_RS02190 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS02195 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS02195 PF00905 Penicillin binding protein transpeptidase domain J4048_RS02195 PF05223 NTF2-like N-terminal transpeptidase domain J4048_RS02200 PF00248 Aldo/keto reductase family J4048_RS02205 PF05043 Mga helix-turn-helix domain J4048_RS02205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS02205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS02205 PF08279 HTH domain J4048_RS02205 PF00874 PRD domain J4048_RS02210 PF00501 AMP-binding enzyme J4048_RS02210 PF13193 AMP-binding enzyme C-terminal domain J4048_RS02225 PF13302 Acetyltransferase (GNAT) domain J4048_RS02230 PF16242 Pyridoxamine 5'-phosphate oxidase like J4048_RS02235 PF10997 Alternate to MurJ J4048_RS02240 PF12823 Domain of unknown function (DUF3817) J4048_RS02245 PF01037 Lrp/AsnC ligand binding domain J4048_RS02250 PF01131 DNA topoisomerase J4048_RS02250 PF01751 Toprim domain J4048_RS02260 PF00990 Diguanylate cyclase, GGDEF domain J4048_RS02265 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) J4048_RS02275 PF03170 Bacterial cellulose synthase subunit J4048_RS02280 PF13520 Amino acid permease J4048_RS02285 PF00293 NUDIX domain J4048_RS02290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4048_RS02290 PF00205 Thiamine pyrophosphate enzyme, central domain J4048_RS02290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4048_RS02320 PF13176 Tetratricopeptide repeat J4048_RS02320 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS02345 PF01566 Natural resistance-associated macrophage protein J4048_RS02355 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J4048_RS02360 PF17314 Family of unknown function (DUF5360) J4048_RS02365 PF00893 Small Multidrug Resistance protein J4048_RS02370 PF12787 EcsC protein family J4048_RS02375 PF10685 Stress-induced bacterial acidophilic repeat motif J4048_RS02375 PF00477 Small hydrophilic plant seed protein J4048_RS02380 PF07883 Cupin domain J4048_RS02385 PF16291 Domain of unknown function (DUF4937 J4048_RS02390 PF05067 Manganese containing catalase J4048_RS02395 PF03480 Bacterial extracellular solute-binding protein, family 7 J4048_RS02400 PF17203 Single cache domain 3 J4048_RS02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS02400 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4048_RS02405 PF08279 HTH domain J4048_RS02405 PF00072 Response regulator receiver domain J4048_RS02410 PF00375 Sodium:dicarboxylate symporter family J4048_RS02415 PF01594 AI-2E family transporter J4048_RS02420 PF00005 ABC transporter J4048_RS02435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J4048_RS02435 PF02770 Acyl-CoA dehydrogenase, middle domain J4048_RS02435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4048_RS02440 PF13040 Fur-regulated basic protein B J4048_RS02450 PF01545 Cation efflux family J4048_RS02450 PF16916 Dimerisation domain of Zinc Transporter J4048_RS02455 PF00085 Thioredoxin J4048_RS02460 PF07478 D-ala D-ala ligase C-terminus J4048_RS02460 PF01820 D-ala D-ala ligase N-terminus J4048_RS02465 PF01225 Mur ligase family, catalytic domain J4048_RS02465 PF02875 Mur ligase family, glutamate ligase domain J4048_RS02465 PF08245 Mur ligase middle domain J4048_RS02470 PF00270 DEAD/DEAH box helicase J4048_RS02470 PF00271 Helicase conserved C-terminal domain J4048_RS02475 PF03703 Bacterial PH domain J4048_RS02480 PF03703 Bacterial PH domain J4048_RS02485 PF01694 Rhomboid family J4048_RS02490 PF01648 4'-phosphopantetheinyl transferase superfamily J4048_RS02500 PF00842 Alanine racemase, C-terminal domain J4048_RS02500 PF01168 Alanine racemase, N-terminal domain J4048_RS02505 PF01402 Ribbon-helix-helix protein, copG family J4048_RS02510 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system J4048_RS02515 PF08678 Rsbr N terminal J4048_RS02515 PF01740 STAS domain J4048_RS02520 PF01740 STAS domain J4048_RS02525 PF13581 Histidine kinase-like ATPase domain J4048_RS02530 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain J4048_RS02530 PF07228 Stage II sporulation protein E (SpoIIE) J4048_RS02535 PF01740 STAS domain J4048_RS02540 PF13581 Histidine kinase-like ATPase domain J4048_RS02545 PF04542 Sigma-70 region 2 J4048_RS02545 PF04539 Sigma-70 region 3 J4048_RS02545 PF04545 Sigma-70, region 4 J4048_RS02550 PF07228 Stage II sporulation protein E (SpoIIE) J4048_RS02555 PF17674 HHH domain J4048_RS02555 PF16921 Tex protein YqgF-like domain J4048_RS02555 PF09371 Tex-like protein N-terminal domain J4048_RS02555 PF00575 S1 RNA binding domain J4048_RS02565 PF10263 SprT-like family J4048_RS02605 PF14659 Phage integrase, N-terminal SAM-like domain J4048_RS02605 PF00589 Phage integrase family J4048_RS02610 PF06114 IrrE N-terminal-like domain J4048_RS02615 PF01381 Helix-turn-helix J4048_RS02635 PF06125 Bacterial protein of unknown function (DUF961) J4048_RS02645 PF02486 Replication initiation factor J4048_RS02645 PF18106 Rolling Circle replication initiation protein N-terminal domain J4048_RS02670 PF12642 Conjugative transposon protein TcpC J4048_RS02680 PF12648 TcpE family J4048_RS02690 PF08960 Domain of unknown function (DUF1874) J4048_RS02700 PF00877 NlpC/P60 family J4048_RS02710 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) J4048_RS02720 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS02730 PF02525 Flavodoxin-like fold J4048_RS02745 PF07690 Major Facilitator Superfamily J4048_RS02750 PF01047 MarR family J4048_RS02755 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) J4048_RS02760 PF01575 MaoC like domain J4048_RS02775 PF02082 Transcriptional regulator J4048_RS02780 PF13460 NAD(P)H-binding J4048_RS02785 PF00487 Fatty acid desaturase J4048_RS02795 PF00313 'Cold-shock' DNA-binding domain J4048_RS02800 PF02559 CarD-like/TRCF domain J4048_RS02805 PF01177 Asp/Glu/Hydantoin racemase J4048_RS02820 PF01734 Patatin-like phospholipase J4048_RS02830 PF07883 Cupin domain J4048_RS02845 PF01565 FAD binding domain J4048_RS02845 PF08031 Berberine and berberine like J4048_RS02855 PF01545 Cation efflux family J4048_RS02855 PF16916 Dimerisation domain of Zinc Transporter J4048_RS02870 PF00701 Dihydrodipicolinate synthetase family J4048_RS02880 PF04055 Radical SAM superfamily J4048_RS02895 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS02895 PF00107 Zinc-binding dehydrogenase J4048_RS02900 PF13411 MerR HTH family regulatory protein J4048_RS02910 PF00155 Aminotransferase class I and II J4048_RS02910 PF00392 Bacterial regulatory proteins, gntR family J4048_RS02925 PF07690 Major Facilitator Superfamily J4048_RS02930 PF00440 Bacterial regulatory proteins, tetR family J4048_RS02930 PF16859 Tetracyclin repressor-like, C-terminal domain J4048_RS02935 PF00892 EamA-like transporter family J4048_RS02940 PF00155 Aminotransferase class I and II J4048_RS02940 PF00392 Bacterial regulatory proteins, gntR family J4048_RS02945 PF07875 Coat F domain J4048_RS02955 PF13823 Alcohol dehydrogenase GroES-associated J4048_RS02955 PF00107 Zinc-binding dehydrogenase J4048_RS02955 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS02960 PF07875 Coat F domain J4048_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS02970 PF07730 Histidine kinase J4048_RS02975 PF00072 Response regulator receiver domain J4048_RS02975 PF00196 Bacterial regulatory proteins, luxR family J4048_RS02980 PF03176 MMPL family J4048_RS02985 PF07722 Peptidase C26 J4048_RS02990 PF00005 ABC transporter J4048_RS02990 PF12848 ABC transporter J4048_RS02995 PF13302 Acetyltransferase (GNAT) domain J4048_RS03000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS03000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS03005 PF00465 Iron-containing alcohol dehydrogenase J4048_RS03010 PF07690 Major Facilitator Superfamily J4048_RS03015 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS03015 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS03025 PF01925 Sulfite exporter TauE/SafE J4048_RS03030 PF00583 Acetyltransferase (GNAT) family J4048_RS03040 PF00293 NUDIX domain J4048_RS03045 PF08241 Methyltransferase domain J4048_RS03065 PF07729 FCD domain J4048_RS03065 PF00392 Bacterial regulatory proteins, gntR family J4048_RS03070 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J4048_RS03085 PF11954 Domain of unknown function (DUF3471) J4048_RS03085 PF00144 Beta-lactamase J4048_RS03095 PF07563 Protein of unknown function (DUF1541) J4048_RS03100 PF07690 Major Facilitator Superfamily J4048_RS03105 PF00392 Bacterial regulatory proteins, gntR family J4048_RS03105 PF07702 UTRA domain J4048_RS03110 PF07729 FCD domain J4048_RS03110 PF00392 Bacterial regulatory proteins, gntR family J4048_RS03115 PF07690 Major Facilitator Superfamily J4048_RS03120 PF00893 Small Multidrug Resistance protein J4048_RS03125 PF00893 Small Multidrug Resistance protein J4048_RS03130 PF17934 Tetracyclin repressor-like, C-terminal domain J4048_RS03130 PF00440 Bacterial regulatory proteins, tetR family J4048_RS03135 PF13520 Amino acid permease J4048_RS03145 PF08327 Activator of Hsp90 ATPase homolog 1-like protein J4048_RS03150 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS03150 PF00107 Zinc-binding dehydrogenase J4048_RS03155 PF00083 Sugar (and other) transporter J4048_RS03195 PF00586 AIR synthase related protein, N-terminal domain J4048_RS03195 PF02769 AIR synthase related protein, C-terminal domain J4048_RS03200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4048_RS03205 PF00814 Glycoprotease family J4048_RS03210 PF00583 Acetyltransferase (GNAT) family J4048_RS03215 PF00814 Glycoprotease family J4048_RS03220 PF12848 ABC transporter J4048_RS03220 PF00005 ABC transporter J4048_RS03220 PF16326 ABC transporter C-terminal domain J4048_RS03225 PF01967 MoaC family J4048_RS03230 PF02629 CoA binding domain J4048_RS03230 PF06971 Putative DNA-binding protein N-terminus J4048_RS03235 PF02416 mttA/Hcf106 family J4048_RS03240 PF00902 Sec-independent protein translocase protein (TatC) J4048_RS03245 PF14146 Domain of unknown function (DUF4305) J4048_RS03250 PF02517 CPBP intramembrane metalloprotease J4048_RS03255 PF00166 Chaperonin 10 Kd subunit J4048_RS03260 PF00118 TCP-1/cpn60 chaperonin family J4048_RS03270 PF13176 Tetratricopeptide repeat J4048_RS03270 PF00931 NB-ARC domain J4048_RS03275 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS03275 PF00107 Zinc-binding dehydrogenase J4048_RS03285 PF00294 pfkB family carbohydrate kinase J4048_RS03290 PF14154 Domain of unknown function (DUF4306) J4048_RS03295 PF04012 PspA/IM30 family J4048_RS03300 PF08271 TFIIB zinc-binding J4048_RS03305 PF04536 TPM domain J4048_RS03310 PF13421 SPFH domain-Band 7 family J4048_RS03315 PF01757 Acyltransferase family J4048_RS03320 PF13739 Deacetylase PdaC J4048_RS03320 PF11738 Protein of unknown function (DUF3298) J4048_RS03325 PF08281 Sigma-70, region 4 J4048_RS03325 PF04542 Sigma-70 region 2 J4048_RS03330 PF00107 Zinc-binding dehydrogenase J4048_RS03330 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS03335 PF03330 Lytic transglycolase J4048_RS03340 PF07676 WD40-like Beta Propeller Repeat J4048_RS03350 PF14169 Cold-inducible protein YdjO J4048_RS03355 PF07731 Multicopper oxidase J4048_RS03355 PF07732 Multicopper oxidase J4048_RS03355 PF00394 Multicopper oxidase J4048_RS03360 PF00324 Amino acid permease J4048_RS03365 PF01545 Cation efflux family J4048_RS03365 PF16916 Dimerisation domain of Zinc Transporter J4048_RS03370 PF07726 ATPase family associated with various cellular activities (AAA) J4048_RS03370 PF17863 AAA lid domain J4048_RS03375 PF01882 Protein of unknown function DUF58 J4048_RS03380 PF01841 Transglutaminase-like superfamily J4048_RS03380 PF13559 Domain of unknown function (DUF4129) J4048_RS03380 PF11992 Domain of unknown function (DUF3488) J4048_RS03385 PF02540 NAD synthase J4048_RS03385 PF00117 Glutamine amidotransferase class-I J4048_RS03385 PF00958 GMP synthase C terminal domain J4048_RS03395 PF04545 Sigma-70, region 4 J4048_RS03395 PF04542 Sigma-70 region 2 J4048_RS03405 PF00860 Permease family J4048_RS03415 PF13076 Fur-regulated basic protein A J4048_RS03420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS03425 PF14044 NETI protein J4048_RS03430 PF00731 AIR carboxylase J4048_RS03435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4048_RS03435 PF02222 ATP-grasp domain J4048_RS03440 PF10397 Adenylosuccinate lyase C-terminus J4048_RS03440 PF00206 Lyase J4048_RS03445 PF01259 SAICAR synthetase J4048_RS03450 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J4048_RS03460 PF02769 AIR synthase related protein, C-terminal domain J4048_RS03460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4048_RS03460 PF00586 AIR synthase related protein, N-terminal domain J4048_RS03465 PF00156 Phosphoribosyl transferase domain J4048_RS03470 PF02769 AIR synthase related protein, C-terminal domain J4048_RS03470 PF00586 AIR synthase related protein, N-terminal domain J4048_RS03475 PF00551 Formyl transferase J4048_RS03480 PF02142 MGS-like domain J4048_RS03480 PF01808 AICARFT/IMPCHase bienzyme J4048_RS03485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4048_RS03485 PF02843 Phosphoribosylglycinamide synthetase, C domain J4048_RS03485 PF02844 Phosphoribosylglycinamide synthetase, N domain J4048_RS03490 PF11127 Protein of unknown function (DUF2892) J4048_RS03495 PF13382 Adenine deaminase C-terminal domain J4048_RS03495 PF01979 Amidohydrolase family J4048_RS03500 PF17479 Protein of unknown function (DUF3048) C-terminal domain J4048_RS03500 PF11258 Protein of unknown function (DUF3048) N-terminal domain J4048_RS03505 PF01371 Trp repressor protein J4048_RS03510 PF01645 Conserved region in glutamate synthase J4048_RS03515 PF01884 PcrB family J4048_RS03520 PF00580 UvrD/REP helicase N-terminal domain J4048_RS03520 PF13361 UvrD-like helicase C-terminal domain J4048_RS03525 PF00533 BRCA1 C Terminus (BRCT) domain J4048_RS03525 PF01653 NAD-dependent DNA ligase adenylation domain J4048_RS03525 PF03120 NAD-dependent DNA ligase OB-fold domain J4048_RS03525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4048_RS03525 PF12826 Helix-hairpin-helix motif J4048_RS03530 PF07537 CamS sex pheromone cAM373 precursor J4048_RS03535 PF01636 Phosphotransferase enzyme family J4048_RS03540 PF02308 MgtC family J4048_RS03545 PF00474 Sodium:solute symporter family J4048_RS03550 PF02686 Glu-tRNAGln amidotransferase C subunit J4048_RS03555 PF01425 Amidase J4048_RS03560 PF02637 GatB domain J4048_RS03560 PF02934 GatB/GatE catalytic domain J4048_RS03565 PF00440 Bacterial regulatory proteins, tetR family J4048_RS03570 PF00873 AcrB/AcrD/AcrF family J4048_RS03575 PF00781 Diacylglycerol kinase catalytic domain J4048_RS03580 PF01938 TRAM domain J4048_RS03580 PF05958 tRNA (Uracil-5-)-methyltransferase J4048_RS03590 PF00005 ABC transporter J4048_RS03605 PF04634 Protein of unknown function, DUF600 J4048_RS03610 PF04740 LXG domain of WXG superfamily J4048_RS03615 PF18593 CdiI immunity protein J4048_RS03620 PF01709 Transcriptional regulator J4048_RS03630 PF11007 Spore coat associated protein JA (CotJA) J4048_RS03635 PF12652 CotJB protein J4048_RS03640 PF05067 Manganese containing catalase J4048_RS03645 PF00583 Acetyltransferase (GNAT) family J4048_RS03655 PF04239 Protein of unknown function (DUF421) J4048_RS03660 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS03665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS03670 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J4048_RS03670 PF01740 STAS domain J4048_RS03675 PF10055 Uncharacterized small protein (DUF2292) J4048_RS03680 PF01687 Riboflavin kinase J4048_RS03685 PF01027 Inhibitor of apoptosis-promoting Bax1 J4048_RS03695 PF01047 MarR family J4048_RS03700 PF01494 FAD binding domain J4048_RS03705 PF13037 Domain of unknown function (DUF3898) J4048_RS03705 PF13039 Protein of unknown function (DUF3900) J4048_RS03710 PF00667 FAD binding domain J4048_RS03710 PF00258 Flavodoxin J4048_RS03710 PF00175 Oxidoreductase NAD-binding domain J4048_RS03710 PF00067 Cytochrome P450 J4048_RS03725 PF00005 ABC transporter J4048_RS03735 PF00884 Sulfatase J4048_RS03740 PF00483 Nucleotidyl transferase J4048_RS03745 PF16363 GDP-mannose 4,6 dehydratase J4048_RS03750 PF03407 Nucleotide-diphospho-sugar transferase J4048_RS03755 PF00535 Glycosyl transferase family 2 J4048_RS03760 PF03407 Nucleotide-diphospho-sugar transferase J4048_RS03765 PF07690 Major Facilitator Superfamily J4048_RS03770 PF13520 Amino acid permease J4048_RS03775 PF00171 Aldehyde dehydrogenase family J4048_RS03780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS03790 PF00535 Glycosyl transferase family 2 J4048_RS03790 PF13181 Tetratricopeptide repeat J4048_RS03795 PF00005 ABC transporter J4048_RS03795 PF16326 ABC transporter C-terminal domain J4048_RS03795 PF12848 ABC transporter J4048_RS03800 PF13411 MerR HTH family regulatory protein J4048_RS03805 PF07690 Major Facilitator Superfamily J4048_RS03810 PF00005 ABC transporter J4048_RS03810 PF12848 ABC transporter J4048_RS03815 PF00270 DEAD/DEAH box helicase J4048_RS03815 PF00271 Helicase conserved C-terminal domain J4048_RS03820 PF00583 Acetyltransferase (GNAT) family J4048_RS03825 PF16884 N-terminal domain of oxidoreductase J4048_RS03825 PF00107 Zinc-binding dehydrogenase J4048_RS03830 PF11486 Protein of unknown function (DUF3212) J4048_RS03835 PF11181 Heat induced stress protein YflT J4048_RS03840 PF00544 Pectate lyase J4048_RS03845 PF00939 Sodium:sulfate symporter transmembrane region J4048_RS03860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4048_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS03865 PF12431 Transcriptional regulator J4048_RS03865 PF08279 HTH domain J4048_RS03865 PF00072 Response regulator receiver domain J4048_RS03870 PF03401 Tripartite tricarboxylate transporter family receptor J4048_RS03875 PF03600 Citrate transporter J4048_RS03880 PF00753 Metallo-beta-lactamase superfamily J4048_RS03885 PF02898 Nitric oxide synthase, oxygenase domain J4048_RS03890 PF00708 Acylphosphatase J4048_RS03895 PF03473 MOSC domain J4048_RS03895 PF03475 3-alpha domain J4048_RS03900 PF11121 Protein of unknown function (DUF2639) J4048_RS03910 PF11588 Protein of unknown function (DUF3243) J4048_RS03915 PF00557 Metallopeptidase family M24 J4048_RS03920 PF02378 Phosphotransferase system, EIIC J4048_RS03920 PF00367 phosphotransferase system, EIIB J4048_RS03925 PF10787 Uncharacterised protein from bacillus cereus group J4048_RS03930 PF00884 Sulfatase J4048_RS03935 PF09350 Domain of unknown function (DUF1992) J4048_RS03940 PF00011 Hsp20/alpha crystallin family J4048_RS03945 PF10676 Spore germination protein gerPA/gerPF J4048_RS03950 PF10676 Spore germination protein gerPA/gerPF J4048_RS03955 PF02378 Phosphotransferase system, EIIC J4048_RS03955 PF00367 phosphotransferase system, EIIB J4048_RS03960 PF16657 Maltogenic Amylase, C-terminal domain J4048_RS03960 PF00128 Alpha amylase, catalytic domain J4048_RS03965 PF00392 Bacterial regulatory proteins, gntR family J4048_RS03965 PF07702 UTRA domain J4048_RS03970 PF00881 Nitroreductase family J4048_RS03985 PF00149 Calcineurin-like phosphoesterase J4048_RS03985 PF02872 5'-nucleotidase, C-terminal domain J4048_RS03990 PF01965 DJ-1/PfpI family J4048_RS03995 PF00356 Bacterial regulatory proteins, lacI family J4048_RS04000 PF08501 Shikimate dehydrogenase substrate binding domain J4048_RS04000 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4048_RS04005 PF01487 Type I 3-dehydroquinase J4048_RS04010 PF07690 Major Facilitator Superfamily J4048_RS04015 PF06569 Protein of unknown function (DUF1128) J4048_RS04020 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4048_RS04030 PF03631 Virulence factor BrkB J4048_RS04035 PF07690 Major Facilitator Superfamily J4048_RS04040 PF01699 Sodium/calcium exchanger protein J4048_RS04045 PF14167 YfkD-like protein J4048_RS04050 PF00924 Mechanosensitive ion channel J4048_RS04055 PF04055 Radical SAM superfamily J4048_RS04055 PF08756 YfkB-like domain J4048_RS04065 PF01522 Polysaccharide deacetylase J4048_RS04070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4048_RS04070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4048_RS04080 PF01544 CorA-like Mg2+ transporter protein J4048_RS04085 PF00730 HhH-GPD superfamily base excision DNA repair protein J4048_RS04090 PF01938 TRAM domain J4048_RS04090 PF05958 tRNA (Uracil-5-)-methyltransferase J4048_RS04100 PF14118 YfzA-like protein J4048_RS04105 PF01207 Dihydrouridine synthase (Dus) J4048_RS04115 PF00676 Dehydrogenase E1 component J4048_RS04120 PF02779 Transketolase, pyrimidine binding domain J4048_RS04120 PF02780 Transketolase, C-terminal domain J4048_RS04125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4048_RS04125 PF00364 Biotin-requiring enzyme J4048_RS04125 PF02817 e3 binding domain J4048_RS04130 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS04130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4048_RS04135 PF01590 GAF domain J4048_RS04135 PF02954 Bacterial regulatory protein, Fis family J4048_RS04135 PF00158 Sigma-54 interaction domain J4048_RS04140 PF08141 Small acid-soluble spore protein H family J4048_RS04145 PF02056 Family 4 glycosyl hydrolase J4048_RS04145 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4048_RS04150 PF01380 SIS domain J4048_RS04150 PF01418 Helix-turn-helix domain, rpiR family J4048_RS04155 PF00367 phosphotransferase system, EIIB J4048_RS04155 PF02378 Phosphotransferase system, EIIC J4048_RS04160 PF00664 ABC transporter transmembrane region J4048_RS04160 PF00005 ABC transporter J4048_RS04165 PF00664 ABC transporter transmembrane region J4048_RS04165 PF00005 ABC transporter J4048_RS04170 PF07681 DoxX J4048_RS04175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS04180 PF01040 UbiA prenyltransferase family J4048_RS04185 PF03551 Transcriptional regulator PadR-like family J4048_RS04185 PF10400 Virulence activator alpha C-term J4048_RS04190 PF02525 Flavodoxin-like fold J4048_RS04195 PF01757 Acyltransferase family J4048_RS04200 PF00391 PEP-utilising enzyme, mobile domain J4048_RS04200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4048_RS04205 PF01337 Barstar (barnase inhibitor) J4048_RS04210 PF12867 DinB superfamily J4048_RS04215 PF07690 Major Facilitator Superfamily J4048_RS04220 PF01047 MarR family J4048_RS04225 PF03706 Lysylphosphatidylglycerol synthase TM region J4048_RS04225 PF09924 Uncharacterised conserved protein (DUF2156) J4048_RS04230 PF02567 Phenazine biosynthesis-like protein J4048_RS04235 PF00881 Nitroreductase family J4048_RS04240 PF14151 YfhD-like protein J4048_RS04245 PF14152 YfhE-like protein J4048_RS04250 PF08338 Domain of unknown function (DUF1731) J4048_RS04250 PF01370 NAD dependent epimerase/dehydratase family J4048_RS04255 PF02631 RecX family J4048_RS04260 PF08838 Protein of unknown function (DUF1811) J4048_RS04265 PF07690 Major Facilitator Superfamily J4048_RS04270 PF10794 Protein of unknown function (DUF2606) J4048_RS04275 PF00089 Trypsin J4048_RS04280 PF08176 Small acid-soluble spore protein K family J4048_RS04285 PF14043 WVELL protein J4048_RS04290 PF08239 Bacterial SH3 domain J4048_RS04295 PF13630 SdpI/YhfL protein family J4048_RS04300 PF00561 alpha/beta hydrolase fold J4048_RS04305 PF00535 Glycosyl transferase family 2 J4048_RS04310 PF09586 Bacterial membrane protein YfhO J4048_RS04315 PF04307 LexA-binding, inner membrane-associated putative hydrolase J4048_RS04320 PF00730 HhH-GPD superfamily base excision DNA repair protein J4048_RS04320 PF14815 NUDIX domain J4048_RS04335 PF04259 Small, acid-soluble spore protein, gamma-type J4048_RS04340 PF14182 YgaB-like protein J4048_RS04345 PF04167 Protein of unknown function (DUF402) J4048_RS04350 PF00664 ABC transporter transmembrane region J4048_RS04350 PF00005 ABC transporter J4048_RS04355 PF06081 Aromatic acid exporter family member 1 J4048_RS04360 PF00202 Aminotransferase class-III J4048_RS04365 PF00578 AhpC/TSA family J4048_RS04370 PF01475 Ferric uptake regulator family J4048_RS04375 PF11023 Zinc-ribbon containing domain J4048_RS04380 PF18576 Helix-turn-helix domain J4048_RS04380 PF14540 Nucleotidyltransferase-like J4048_RS04475 PF00145 C-5 cytosine-specific DNA methylase J4048_RS04475 PF01381 Helix-turn-helix J4048_RS04480 PF09553 Eco47II restriction endonuclease J4048_RS04495 PF03553 Na+/H+ antiporter family J4048_RS04500 PF03575 Peptidase family S51 J4048_RS04505 PF13667 ThiC-associated domain J4048_RS04505 PF01964 Radical SAM ThiC family J4048_RS04510 PF08031 Berberine and berberine like J4048_RS04510 PF01565 FAD binding domain J4048_RS04515 PF13040 Fur-regulated basic protein B J4048_RS04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4048_RS04525 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS04530 PF12911 N-terminal TM domain of oligopeptide transport permease C J4048_RS04530 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS04535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS04535 PF00005 ABC transporter J4048_RS04540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS04540 PF00005 ABC transporter J4048_RS04545 PF06628 Catalase-related immune-responsive J4048_RS04545 PF00199 Catalase J4048_RS04555 PF00005 ABC transporter J4048_RS04560 PF09084 NMT1/THI5 like J4048_RS04565 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS04570 PF00296 Luciferase-like monooxygenase J4048_RS04575 PF00253 Ribosomal protein S14p/S29e J4048_RS04585 PF01381 Helix-turn-helix J4048_RS04600 PF08331 Domain of unknown function (DUF1730) J4048_RS04605 PF12671 Putative amidase domain J4048_RS04610 PF00588 SpoU rRNA Methylase family J4048_RS04615 PF13171 Protein of unknown function (DUF4004) J4048_RS04620 PF04519 Polymer-forming cytoskeletal J4048_RS04630 PF08298 PrkA AAA domain J4048_RS04630 PF06798 PrkA serine protein kinase C-terminal domain J4048_RS04635 PF04285 Protein of unknown function (DUF444) J4048_RS04640 PF01047 MarR family J4048_RS04650 PF07690 Major Facilitator Superfamily J4048_RS04655 PF03358 NADPH-dependent FMN reductase J4048_RS04670 PF00392 Bacterial regulatory proteins, gntR family J4048_RS04675 PF00005 ABC transporter J4048_RS04680 PF00005 ABC transporter J4048_RS04685 PF12679 ABC-2 family transporter protein J4048_RS04690 PF00313 'Cold-shock' DNA-binding domain J4048_RS04695 PF03180 NLPA lipoprotein J4048_RS04700 PF00990 Diguanylate cyclase, GGDEF domain J4048_RS04700 PF07694 5TMR of 5TMR-LYT J4048_RS04705 PF00375 Sodium:dicarboxylate symporter family J4048_RS04715 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4048_RS04725 PF07875 Coat F domain J4048_RS04730 PF02872 5'-nucleotidase, C-terminal domain J4048_RS04730 PF00746 LPXTG cell wall anchor motif J4048_RS04730 PF00149 Calcineurin-like phosphoesterase J4048_RS04730 PF00565 Staphylococcal nuclease homologue J4048_RS04735 PF04203 Sortase domain J4048_RS04740 PF00849 RNA pseudouridylate synthase J4048_RS04740 PF01479 S4 domain J4048_RS04745 PF17326 Family of unknown function (DUF5365) J4048_RS04750 PF00571 CBS domain J4048_RS04755 PF13419 Haloacid dehalogenase-like hydrolase J4048_RS04760 PF00583 Acetyltransferase (GNAT) family J4048_RS04760 PF00795 Carbon-nitrogen hydrolase J4048_RS04765 PF00202 Aminotransferase class-III J4048_RS04770 PF04309 Glycerol-3-phosphate responsive antiterminator J4048_RS04775 PF00230 Major intrinsic protein J4048_RS04780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4048_RS04780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4048_RS04785 PF01266 FAD dependent oxidoreductase J4048_RS04785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4048_RS04790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4048_RS04790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4048_RS04790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4048_RS04790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4048_RS04800 PF00072 Response regulator receiver domain J4048_RS04800 PF00196 Bacterial regulatory proteins, luxR family J4048_RS04805 PF03358 NADPH-dependent FMN reductase J4048_RS04810 PF14148 YhdB-like protein J4048_RS04815 PF13028 Protein of unknown function (DUF3889) J4048_RS04820 PF01476 LysM domain J4048_RS04820 PF00877 NlpC/P60 family J4048_RS04825 PF02082 Transcriptional regulator J4048_RS04830 PF05552 Conserved TM helix J4048_RS04835 PF04293 SpoVR like protein J4048_RS04840 PF00245 Alkaline phosphatase J4048_RS04845 PF01476 LysM domain J4048_RS04845 PF00877 NlpC/P60 family J4048_RS04850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS04850 PF03466 LysR substrate binding domain J4048_RS04855 PF00285 Citrate synthase, C-terminal domain J4048_RS04865 PF13520 Amino acid permease J4048_RS04870 PF00209 Sodium:neurotransmitter symporter family J4048_RS04875 PF17453 Sigma-M inhibitor J4048_RS04880 PF13791 Sigma factor regulator C-terminal J4048_RS04880 PF13800 Sigma factor regulator N-terminal J4048_RS04885 PF04542 Sigma-70 region 2 J4048_RS04885 PF08281 Sigma-70, region 4 J4048_RS04890 PF01553 Acyltransferase J4048_RS04895 PF00571 CBS domain J4048_RS04895 PF03471 Transporter associated domain J4048_RS04895 PF01595 Cyclin M transmembrane N-terminal domain J4048_RS04900 PF13411 MerR HTH family regulatory protein J4048_RS04905 PF00155 Aminotransferase class I and II J4048_RS04910 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS04910 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS04915 PF03471 Transporter associated domain J4048_RS04915 PF00571 CBS domain J4048_RS04915 PF01595 Cyclin M transmembrane N-terminal domain J4048_RS04920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4048_RS04925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4048_RS04930 PF03009 Glycerophosphoryl diester phosphodiesterase family J4048_RS04935 PF17444 Uncharacterized YhdX-like J4048_RS04940 PF00924 Mechanosensitive ion channel J4048_RS04945 PF02146 Sir2 family J4048_RS04950 PF01522 Polysaccharide deacetylase J4048_RS04955 PF01063 Amino-transferase class IV J4048_RS04960 PF13977 BetI-type transcriptional repressor, C-terminal J4048_RS04960 PF00440 Bacterial regulatory proteins, tetR family J4048_RS04970 PF00582 Universal stress protein family J4048_RS04975 PF00664 ABC transporter transmembrane region J4048_RS04975 PF00005 ABC transporter J4048_RS04980 PF00005 ABC transporter J4048_RS04980 PF00664 ABC transporter transmembrane region J4048_RS04985 PF13460 NAD(P)H-binding J4048_RS04990 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4048_RS04995 PF17277 Family of unknown function (DUF5342) J4048_RS05000 PF14398 YheC/D like ATP-grasp J4048_RS05005 PF14398 YheC/D like ATP-grasp J4048_RS05010 PF04286 Protein of unknown function (DUF445) J4048_RS05015 PF06133 Control of competence regulator ComK, YlbF/YmcA J4048_RS05020 PF08713 DNA alkylation repair enzyme J4048_RS05030 PF04055 Radical SAM superfamily J4048_RS05035 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J4048_RS05040 PF00999 Sodium/hydrogen exchanger family J4048_RS05045 PF02080 TrkA-C domain J4048_RS05055 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS05060 PF14120 YhzD-like protein J4048_RS05065 PF13732 Domain of unknown function (DUF4162) J4048_RS05065 PF00005 ABC transporter J4048_RS05075 PF00149 Calcineurin-like phosphoesterase J4048_RS05080 PF13514 AAA domain J4048_RS05085 PF01966 HD domain J4048_RS05090 PF14147 Sporulation protein YhaL J4048_RS05100 PF09680 Family of unknown function J4048_RS05105 PF09680 Family of unknown function J4048_RS05115 PF11667 Putative zincin peptidase J4048_RS05120 PF08963 Protein of unknown function (DUF1878) J4048_RS05125 PF01047 MarR family J4048_RS05130 PF12732 YtxH-like protein J4048_RS05140 PF17099 Tryptophan transporter TrpP J4048_RS05145 PF00266 Aminotransferase class-V J4048_RS05150 PF01230 HIT domain J4048_RS05155 PF00005 ABC transporter J4048_RS05160 PF05975 Bacterial ABC transporter protein EcsB J4048_RS05165 PF12787 EcsC protein family J4048_RS05170 PF07687 Peptidase dimerisation domain J4048_RS05170 PF01546 Peptidase family M20/M25/M40 J4048_RS05180 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS05185 PF00912 Transglycosylase J4048_RS05185 PF00905 Penicillin binding protein transpeptidase domain J4048_RS05190 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4048_RS05195 PF00762 Ferrochelatase J4048_RS05200 PF01593 Flavin containing amine oxidoreductase J4048_RS05205 PF17932 Tetracyclin repressor-like, C-terminal domain J4048_RS05205 PF00440 Bacterial regulatory proteins, tetR family J4048_RS05215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4048_RS05215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4048_RS05225 PF05343 M42 glutamyl aminopeptidase J4048_RS05230 PF00375 Sodium:dicarboxylate symporter family J4048_RS05235 PF14149 YhfH-like protein J4048_RS05240 PF12706 Beta-lactamase superfamily domain J4048_RS05245 PF03099 Biotin/lipoate A/B protein ligase family J4048_RS05245 PF10437 Bacterial lipoate protein ligase C-terminus J4048_RS05250 PF13460 NAD(P)H-binding J4048_RS05255 PF00501 AMP-binding enzyme J4048_RS05255 PF13193 AMP-binding enzyme C-terminal domain J4048_RS05265 PF01435 Peptidase family M48 J4048_RS05265 PF16491 CAAX prenyl protease N-terminal, five membrane helices J4048_RS05270 PF05922 Peptidase inhibitor I9 J4048_RS05270 PF00082 Subtilase family J4048_RS05275 PF01497 Periplasmic binding protein J4048_RS05280 PF00300 Histidine phosphatase superfamily (branch 1) J4048_RS05285 PF00108 Thiolase, N-terminal domain J4048_RS05285 PF02803 Thiolase, C-terminal domain J4048_RS05290 PF00501 AMP-binding enzyme J4048_RS05290 PF13193 AMP-binding enzyme C-terminal domain J4048_RS05295 PF02632 BioY family J4048_RS05300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS05305 PF01266 FAD dependent oxidoreductase J4048_RS05305 PF00355 Rieske [2Fe-2S] domain J4048_RS05315 PF08858 IDEAL domain J4048_RS05320 PF06338 ComK protein J4048_RS05330 PF08818 Domain of unknown function (DU1801) J4048_RS05340 PF15493 Domain of unknown function, YrpD J4048_RS05345 PF05901 Excalibur calcium-binding domain J4048_RS05350 PF01906 Putative heavy-metal-binding J4048_RS05355 PF00474 Sodium:solute symporter family J4048_RS05360 PF11755 Protein of unknown function (DUF3311) J4048_RS05370 PF09335 SNARE associated Golgi protein J4048_RS05375 PF10502 Signal peptidase, peptidase S26 J4048_RS05380 PF01494 FAD binding domain J4048_RS05385 PF01047 MarR family J4048_RS05390 PF05145 Transition state regulatory protein AbrB J4048_RS05395 PF07690 Major Facilitator Superfamily J4048_RS05400 PF08361 MAATS-type transcriptional repressor, C-terminal region J4048_RS05400 PF00440 Bacterial regulatory proteins, tetR family J4048_RS05405 PF02915 Rubrerythrin J4048_RS05415 PF12705 PD-(D/E)XK nuclease superfamily J4048_RS05415 PF13361 UvrD-like helicase C-terminal domain J4048_RS05420 PF00580 UvrD/REP helicase N-terminal domain J4048_RS05420 PF13361 UvrD-like helicase C-terminal domain J4048_RS05420 PF12705 PD-(D/E)XK nuclease superfamily J4048_RS05425 PF00149 Calcineurin-like phosphoesterase J4048_RS05425 PF12320 Type 5 capsule protein repressor C-terminal domain J4048_RS05430 PF13476 AAA domain J4048_RS05440 PF10676 Spore germination protein gerPA/gerPF J4048_RS05445 PF10970 Spore germination protein GerPE J4048_RS05455 PF10737 Spore germination protein GerPC J4048_RS05460 PF10803 Spore germination GerPB J4048_RS05465 PF10676 Spore germination protein gerPA/gerPF J4048_RS05470 PF09388 Spo0E like sporulation regulatory protein J4048_RS05475 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4048_RS05480 PF07457 Protein of unknown function (DUF1516) J4048_RS05490 PF10949 Protein of unknown function (DUF2777) J4048_RS05495 PF13537 Glutamine amidotransferase domain J4048_RS05495 PF00733 Asparagine synthase J4048_RS05505 PF01554 MatE J4048_RS05510 PF02311 AraC-like ligand binding domain J4048_RS05510 PF12833 Helix-turn-helix domain J4048_RS05515 PF05163 DinB family J4048_RS05520 PF01810 LysE type translocator J4048_RS05525 PF00155 Aminotransferase class I and II J4048_RS05525 PF00392 Bacterial regulatory proteins, gntR family J4048_RS05530 PF13599 Pentapeptide repeats (9 copies) J4048_RS05535 PF13673 Acetyltransferase (GNAT) domain J4048_RS05540 PF02219 Methylenetetrahydrofolate reductase J4048_RS05540 PF02574 Homocysteine S-methyltransferase J4048_RS05545 PF04461 Protein of unknown function (DUF520) J4048_RS05550 PF13509 S1 domain J4048_RS05550 PF17783 CvfB-like winged helix domain J4048_RS05555 PF02608 ABC transporter substrate-binding protein PnrA-like J4048_RS05560 PF12729 Four helix bundle sensory module for signal transduction J4048_RS05560 PF00672 HAMP domain J4048_RS05560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS05565 PF00067 Cytochrome P450 J4048_RS05575 PF02645 Uncharacterised protein, DegV family COG1307 J4048_RS05580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS05580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS05585 PF12690 Intracellular proteinase inhibitor J4048_RS05590 PF12758 Protein of unknown function (DUF3813) J4048_RS05605 PF00326 Prolyl oligopeptidase family J4048_RS05610 PF01883 Iron-sulfur cluster assembly protein J4048_RS05615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS05620 PF01565 FAD binding domain J4048_RS05630 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4048_RS05630 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4048_RS05635 PF01960 ArgJ family J4048_RS05640 PF00696 Amino acid kinase family J4048_RS05645 PF00202 Aminotransferase class-III J4048_RS05650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4048_RS05650 PF00117 Glutamine amidotransferase class-I J4048_RS05655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4048_RS05655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4048_RS05660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4048_RS05660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4048_RS05665 PF14168 YjzC-like protein J4048_RS05670 PF11151 Protein of unknown function (DUF2929) J4048_RS05685 PF02608 ABC transporter substrate-binding protein PnrA-like J4048_RS05690 PF10815 ComZ J4048_RS05700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4048_RS05700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4048_RS05705 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS05705 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS05710 PF10026 Predicted Zn-dependent protease (DUF2268) J4048_RS05715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS05715 PF00005 ABC transporter J4048_RS05720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS05720 PF00005 ABC transporter J4048_RS05725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4048_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS05735 PF12911 N-terminal TM domain of oligopeptide transport permease C J4048_RS05740 PF12227 Protein of unknown function (DUF3603) J4048_RS05745 PF00579 tRNA synthetases class I (W and Y) J4048_RS05750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4048_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS05760 PF12911 N-terminal TM domain of oligopeptide transport permease C J4048_RS05765 PF00005 ABC transporter J4048_RS05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS05770 PF00005 ABC transporter J4048_RS05770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS05780 PF13508 Acetyltransferase (GNAT) domain J4048_RS05785 PF03960 ArsC family J4048_RS05790 PF03741 Integral membrane protein TerC family J4048_RS05795 PF05389 Negative regulator of genetic competence (MecA) J4048_RS05800 PF06054 Competence protein CoiA-like family J4048_RS05805 PF01432 Peptidase family M3 J4048_RS05805 PF08439 Oligopeptidase F J4048_RS05820 PF01152 Bacterial-like globin J4048_RS05825 PF01464 Transglycosylase SLT domain J4048_RS05830 PF01928 CYTH domain J4048_RS05840 PF04607 Region found in RelA / SpoT proteins J4048_RS05845 PF01513 ATP-NAD kinase J4048_RS05850 PF00849 RNA pseudouridylate synthase J4048_RS05855 PF00149 Calcineurin-like phosphoesterase J4048_RS05860 PF00999 Sodium/hydrogen exchanger family J4048_RS05860 PF02080 TrkA-C domain J4048_RS05860 PF02254 TrkA-N domain J4048_RS05865 PF03070 TENA/THI-4/PQQC family J4048_RS05870 PF02581 Thiamine monophosphate synthase J4048_RS05875 PF01266 FAD dependent oxidoreductase J4048_RS05880 PF02597 ThiS family J4048_RS05885 PF05690 Thiazole biosynthesis protein ThiG J4048_RS05890 PF00899 ThiF family J4048_RS05895 PF08543 Phosphomethylpyrimidine kinase J4048_RS05905 PF14153 Spore coat protein CotO J4048_RS05910 PF10612 Spore coat protein Z J4048_RS05915 PF10612 Spore coat protein Z J4048_RS05920 PF07552 Spore Coat Protein X and V domain J4048_RS05930 PF07552 Spore Coat Protein X and V domain J4048_RS05935 PF07098 Protein of unknown function (DUF1360) J4048_RS05950 PF14069 Stage VI sporulation protein F J4048_RS05955 PF00580 UvrD/REP helicase N-terminal domain J4048_RS05955 PF13361 UvrD-like helicase C-terminal domain J4048_RS05965 PF00753 Metallo-beta-lactamase superfamily J4048_RS05975 PF00005 ABC transporter J4048_RS05985 PF13673 Acetyltransferase (GNAT) domain J4048_RS05995 PF00756 Putative esterase J4048_RS06000 PF01053 Cys/Met metabolism PLP-dependent enzyme J4048_RS06005 PF01053 Cys/Met metabolism PLP-dependent enzyme J4048_RS06015 PF02899 Phage integrase, N-terminal SAM-like domain J4048_RS06015 PF00589 Phage integrase family J4048_RS06045 PF10960 BhlA holin family J4048_RS06050 PF01471 Putative peptidoglycan binding domain J4048_RS06050 PF01510 N-acetylmuramoyl-L-alanine amidase J4048_RS06050 PF01476 LysM domain J4048_RS06075 PF04740 LXG domain of WXG superfamily J4048_RS06075 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4048_RS06100 PF17094 Uncharacterised protein family (UPF0715) J4048_RS06130 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS06135 PF07690 Major Facilitator Superfamily J4048_RS06140 PF01047 MarR family J4048_RS06145 PF07745 Glycosyl hydrolase family 53 J4048_RS06150 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4048_RS06150 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4048_RS06155 PF16363 GDP-mannose 4,6 dehydratase J4048_RS06160 PF10509 Galactokinase galactose-binding signature J4048_RS06160 PF08544 GHMP kinases C terminal J4048_RS06160 PF00288 GHMP kinases N terminal domain J4048_RS06165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS06165 PF02378 Phosphotransferase system, EIIC J4048_RS06170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4048_RS06175 PF00232 Glycosyl hydrolase family 1 J4048_RS06180 PF00455 DeoR C terminal sensor domain J4048_RS06180 PF08220 DeoR-like helix-turn-helix domain J4048_RS06195 PF02308 MgtC family J4048_RS06205 PF14070 Putative motility protein J4048_RS06210 PF10990 Protein of unknown function (DUF2809) J4048_RS06215 PF14172 Domain of unknown function (DUF4309) J4048_RS06220 PF12838 4Fe-4S dicluster domain J4048_RS06220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4048_RS06220 PF00384 Molybdopterin oxidoreductase J4048_RS06220 PF01568 Molydopterin dinucleotide binding domain J4048_RS06220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4048_RS06225 PF07849 Protein of unknown function (DUF1641) J4048_RS06230 PF00067 Cytochrome P450 J4048_RS06235 PF04101 Glycosyltransferase family 28 C-terminal domain J4048_RS06245 PF02602 Uroporphyrinogen-III synthase HemD J4048_RS06250 PF03649 Uncharacterised protein family (UPF0014) J4048_RS06255 PF00005 ABC transporter J4048_RS06260 PF13536 Putative multidrug resistance efflux transporter J4048_RS06270 PF07849 Protein of unknown function (DUF1641) J4048_RS06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS06280 PF02614 Glucuronate isomerase J4048_RS06290 PF00356 Bacterial regulatory proteins, lacI family J4048_RS06295 PF01232 Mannitol dehydrogenase Rossmann domain J4048_RS06295 PF08125 Mannitol dehydrogenase C-terminal domain J4048_RS06300 PF08666 SAF domain J4048_RS06300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J4048_RS06305 PF01925 Sulfite exporter TauE/SafE J4048_RS06310 PF05163 DinB family J4048_RS06315 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS06325 PF01510 N-acetylmuramoyl-L-alanine amidase J4048_RS06325 PF01471 Putative peptidoglycan binding domain J4048_RS06325 PF01476 LysM domain J4048_RS06330 PF08000 Bacterial PH domain J4048_RS06335 PF05908 Poly-gamma-glutamate hydrolase J4048_RS06340 PF05067 Manganese containing catalase J4048_RS06345 PF06114 IrrE N-terminal-like domain J4048_RS06350 PF01381 Helix-turn-helix J4048_RS06365 PF01695 IstB-like ATP binding protein J4048_RS06380 PF17356 Phage-like element PBSX protein XtrA J4048_RS06385 PF08281 Sigma-70, region 4 J4048_RS06390 PF03592 Terminase small subunit J4048_RS06390 PF10668 Phage terminase small subunit J4048_RS06395 PF17288 Terminase RNAseH like domain J4048_RS06395 PF04466 Phage terminase large subunit J4048_RS06400 PF04860 Phage portal protein J4048_RS06405 PF14550 Putative phage serine protease XkdF J4048_RS06410 PF05065 Phage capsid family J4048_RS06415 PF11436 Protein of unknown function (DUF3199) J4048_RS06420 PF12206 Domain of unknown function (DUF3599) J4048_RS06425 PF04883 Bacteriophage HK97-gp10, putative tail-component J4048_RS06440 PF04984 Phage tail sheath protein subtilisin-like domain J4048_RS06440 PF17482 Phage tail sheath C-terminal domain J4048_RS06440 PF17481 Phage tail sheath protein beta-sandwich domain J4048_RS06445 PF09393 Phage tail tube protein J4048_RS06450 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC J4048_RS06460 PF01464 Transglycosylase SLT domain J4048_RS06460 PF01464 Transglycosylase SLT domain J4048_RS06460 PF01464 Transglycosylase SLT domain J4048_RS06465 PF01476 LysM domain J4048_RS06475 PF10844 Protein of unknown function (DUF2577) J4048_RS06480 PF10934 Protein of unknown function (DUF2634) J4048_RS06485 PF04865 Baseplate J-like protein J4048_RS06490 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) J4048_RS06510 PF09693 Phage uncharacterised protein (Phage_XkdX) J4048_RS06520 PF10779 Haemolysin XhlA J4048_RS06525 PF04688 SPP1 phage holin J4048_RS06530 PF01471 Putative peptidoglycan binding domain J4048_RS06530 PF01476 LysM domain J4048_RS06530 PF01510 N-acetylmuramoyl-L-alanine amidase J4048_RS06535 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system J4048_RS06540 PF14171 Toxin SpoIISA, type II toxin-antitoxin system J4048_RS06545 PF01384 Phosphate transporter family J4048_RS06550 PF01865 Protein of unknown function DUF47 J4048_RS06555 PF13520 Amino acid permease J4048_RS06560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS06565 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J4048_RS06570 PF00535 Glycosyl transferase family 2 J4048_RS06580 PF13180 PDZ domain J4048_RS06585 PF07690 Major Facilitator Superfamily J4048_RS06590 PF04951 D-aminopeptidase J4048_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS06600 PF12911 N-terminal TM domain of oligopeptide transport permease C J4048_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS06605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS06605 PF00005 ABC transporter J4048_RS06610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4048_RS06615 PF17676 LD-carboxypeptidase C-terminal domain J4048_RS06615 PF02016 LD-carboxypeptidase N-terminal domain J4048_RS06620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4048_RS06620 PF13378 Enolase C-terminal domain-like J4048_RS06625 PF00877 NlpC/P60 family J4048_RS06630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4048_RS06630 PF00005 ABC transporter J4048_RS06635 PF10282 Lactonase, 7-bladed beta-propeller J4048_RS06645 PF03061 Thioesterase superfamily J4048_RS06650 PF13302 Acetyltransferase (GNAT) domain J4048_RS06655 PF00893 Small Multidrug Resistance protein J4048_RS06660 PF00893 Small Multidrug Resistance protein J4048_RS06665 PF00551 Formyl transferase J4048_RS06665 PF01842 ACT domain J4048_RS06670 PF01472 PUA domain J4048_RS06670 PF00696 Amino acid kinase family J4048_RS06675 PF00171 Aldehyde dehydrogenase family J4048_RS06680 PF02566 OsmC-like protein J4048_RS06685 PF01047 MarR family J4048_RS06690 PF02566 OsmC-like protein J4048_RS06705 PF00535 Glycosyl transferase family 2 J4048_RS06705 PF13181 Tetratricopeptide repeat J4048_RS06715 PF12832 MFS_1 like family J4048_RS06720 PF00027 Cyclic nucleotide-binding domain J4048_RS06725 PF01717 Cobalamin-independent synthase, Catalytic domain J4048_RS06725 PF08267 Cobalamin-independent synthase, N-terminal domain J4048_RS06730 PF00082 Subtilase family J4048_RS06735 PF01740 STAS domain J4048_RS06740 PF02361 Cobalt transport protein J4048_RS06745 PF00005 ABC transporter J4048_RS06750 PF09819 ABC-type cobalt transport system, permease component J4048_RS06755 PF00704 Glycosyl hydrolases family 18 J4048_RS06755 PF01476 LysM domain J4048_RS06760 PF11132 Transcriptional regulator protein (SplA) J4048_RS06765 PF01769 Divalent cation transporter J4048_RS06765 PF03448 MgtE intracellular N domain J4048_RS06765 PF00571 CBS domain J4048_RS06770 PF13411 MerR HTH family regulatory protein J4048_RS06785 PF01047 MarR family J4048_RS06795 PF01068 ATP dependent DNA ligase domain J4048_RS06800 PF02735 Ku70/Ku80 beta-barrel domain J4048_RS06805 PF09335 SNARE associated Golgi protein J4048_RS06810 PF03741 Integral membrane protein TerC family J4048_RS06815 PF04542 Sigma-70 region 2 J4048_RS06820 PF12791 Anti-sigma factor N-terminus J4048_RS06825 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4048_RS06830 PF08876 Domain of unknown function (DUF1836) J4048_RS06835 PF01435 Peptidase family M48 J4048_RS06840 PF02386 Cation transport protein J4048_RS06845 PF04239 Protein of unknown function (DUF421) J4048_RS06855 PF01757 Acyltransferase family J4048_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS06860 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS06860 PF13188 PAS domain J4048_RS06860 PF13426 PAS domain J4048_RS06860 PF00989 PAS fold J4048_RS06865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4048_RS06865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4048_RS06870 PF01008 Initiation factor 2 subunit family J4048_RS06875 PF01636 Phosphotransferase enzyme family J4048_RS06880 PF00795 Carbon-nitrogen hydrolase J4048_RS06885 PF00155 Aminotransferase class I and II J4048_RS06890 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J4048_RS06890 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J4048_RS06900 PF00596 Class II Aldolase and Adducin N-terminal domain J4048_RS06905 PF03079 ARD/ARD' family J4048_RS06910 PF09388 Spo0E like sporulation regulatory protein J4048_RS06915 PF02743 Cache domain J4048_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS06915 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS06920 PF01047 MarR family J4048_RS06925 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4048_RS06925 PF00691 OmpA family J4048_RS06930 PF01618 MotA/TolQ/ExbB proton channel family J4048_RS06935 PF17871 AAA lid domain J4048_RS06935 PF07724 AAA domain (Cdc48 subfamily) J4048_RS06935 PF10431 C-terminal, D2-small domain, of ClpB protein J4048_RS06935 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS06950 PF06508 Queuosine biosynthesis protein QueC J4048_RS06955 PF01242 6-pyruvoyl tetrahydropterin synthase J4048_RS06960 PF04055 Radical SAM superfamily J4048_RS06965 PF14489 QueF-like protein J4048_RS06970 PF01638 HxlR-like helix-turn-helix J4048_RS06985 PF01476 LysM domain J4048_RS06990 PF01476 LysM domain J4048_RS06995 PF00704 Glycosyl hydrolases family 18 J4048_RS07000 PF11514 Protein of unknown function (DUF3219) J4048_RS07005 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) J4048_RS07015 PF07486 Cell Wall Hydrolase J4048_RS07020 PF01943 Polysaccharide biosynthesis protein J4048_RS07025 PF00578 AhpC/TSA family J4048_RS07035 PF01321 Creatinase/Prolidase N-terminal domain J4048_RS07035 PF00557 Metallopeptidase family M24 J4048_RS07040 PF00356 Bacterial regulatory proteins, lacI family J4048_RS07040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4048_RS07045 PF03123 CAT RNA binding domain J4048_RS07045 PF00874 PRD domain J4048_RS07050 PF02378 Phosphotransferase system, EIIC J4048_RS07050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4048_RS07050 PF00367 phosphotransferase system, EIIB J4048_RS07055 PF00381 PTS HPr component phosphorylation site J4048_RS07060 PF05524 PEP-utilising enzyme, N-terminal J4048_RS07060 PF00391 PEP-utilising enzyme, mobile domain J4048_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain J4048_RS07065 PF11132 Transcriptional regulator protein (SplA) J4048_RS07075 PF02743 Cache domain J4048_RS07075 PF00672 HAMP domain J4048_RS07075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS07080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4048_RS07080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4048_RS07085 PF00188 Cysteine-rich secretory protein family J4048_RS07090 PF00905 Penicillin binding protein transpeptidase domain J4048_RS07090 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS07095 PF08447 PAS fold J4048_RS07095 PF00989 PAS fold J4048_RS07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS07095 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS07100 PF00155 Aminotransferase class I and II J4048_RS07110 PF01584 CheW-like domain J4048_RS07110 PF00072 Response regulator receiver domain J4048_RS07120 PF14177 YkyB-like protein J4048_RS07125 PF07690 Major Facilitator Superfamily J4048_RS07130 PF01476 LysM domain J4048_RS07130 PF03734 L,D-transpeptidase catalytic domain J4048_RS07135 PF00149 Calcineurin-like phosphoesterase J4048_RS07135 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4048_RS07150 PF00563 EAL domain J4048_RS07150 PF10388 EAL-domain associated signalling protein domain J4048_RS07155 PF08796 Protein of unknown function (DUF1797) J4048_RS07160 PF04308 Ribonuclease H-like J4048_RS07165 PF14156 Antirepressor AbbA J4048_RS07175 PF03466 LysR substrate binding domain J4048_RS07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS07180 PF00258 Flavodoxin J4048_RS07190 PF00258 Flavodoxin J4048_RS07195 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal J4048_RS07195 PF00132 Bacterial transferase hexapeptide (six repeats) J4048_RS07195 PF14602 Hexapeptide repeat of succinyl-transferase J4048_RS07200 PF07687 Peptidase dimerisation domain J4048_RS07200 PF01546 Peptidase family M20/M25/M40 J4048_RS07205 PF03698 Uncharacterised protein family (UPF0180) J4048_RS07210 PF00924 Mechanosensitive ion channel J4048_RS07215 PF00578 AhpC/TSA family J4048_RS07230 PF12804 MobA-like NTP transferase domain J4048_RS07235 PF00899 ThiF family J4048_RS07240 PF00994 Probable molybdopterin binding domain J4048_RS07240 PF03454 MoeA C-terminal region (domain IV) J4048_RS07240 PF03453 MoeA N-terminal region (domain I and II) J4048_RS07245 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J4048_RS07250 PF02391 MoaE protein J4048_RS07255 PF02597 ThiS family J4048_RS07260 PF04893 Yip1 domain J4048_RS07265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4048_RS07270 PF00005 ABC transporter J4048_RS07275 PF02687 FtsX-like permease family J4048_RS07275 PF12704 MacB-like periplasmic core domain J4048_RS07280 PF00455 DeoR C terminal sensor domain J4048_RS07280 PF08220 DeoR-like helix-turn-helix domain J4048_RS07285 PF00294 pfkB family carbohydrate kinase J4048_RS07290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS07290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS07295 PF10502 Signal peptidase, peptidase S26 J4048_RS07305 PF00005 ABC transporter J4048_RS07305 PF12848 ABC transporter J4048_RS07310 PF02558 Ketopantoate reductase PanE/ApbA J4048_RS07310 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4048_RS07315 PF02073 Thermophilic metalloprotease (M29) J4048_RS07320 PF17447 Uncharacterized YkpC-like J4048_RS07330 PF18277 AbrB C-terminal domain J4048_RS07330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J4048_RS07335 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS07335 PF00989 PAS fold J4048_RS07340 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4048_RS07345 PF02080 TrkA-C domain J4048_RS07345 PF02254 TrkA-N domain J4048_RS07350 PF13382 Adenine deaminase C-terminal domain J4048_RS07350 PF01979 Amidohydrolase family J4048_RS07355 PF17770 Ribonuclease J C-terminal domain J4048_RS07355 PF00753 Metallo-beta-lactamase superfamily J4048_RS07355 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4048_RS07360 PF07288 Protein of unknown function (DUF1447) J4048_RS07370 PF01327 Polypeptide deformylase J4048_RS07380 PF10368 Putative cell-wall binding lipoprotein J4048_RS07385 PF00698 Acyl transferase domain J4048_RS07390 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07390 PF00550 Phosphopantetheine attachment site J4048_RS07390 PF14765 Polyketide synthase dehydratase J4048_RS07390 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07390 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07390 PF00668 Condensation domain J4048_RS07390 PF13193 AMP-binding enzyme C-terminal domain J4048_RS07390 PF00501 AMP-binding enzyme J4048_RS07390 PF08659 KR domain J4048_RS07395 PF08659 KR domain J4048_RS07395 PF00550 Phosphopantetheine attachment site J4048_RS07395 PF14765 Polyketide synthase dehydratase J4048_RS07395 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07395 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07395 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07405 PF14765 Polyketide synthase dehydratase J4048_RS07405 PF00550 Phosphopantetheine attachment site J4048_RS07405 PF08659 KR domain J4048_RS07405 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07405 PF00501 AMP-binding enzyme J4048_RS07405 PF13193 AMP-binding enzyme C-terminal domain J4048_RS07405 PF00668 Condensation domain J4048_RS07405 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07405 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07410 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07410 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07410 PF00550 Phosphopantetheine attachment site J4048_RS07410 PF14765 Polyketide synthase dehydratase J4048_RS07410 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07410 PF08659 KR domain J4048_RS07415 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07415 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07415 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07415 PF00550 Phosphopantetheine attachment site J4048_RS07415 PF14765 Polyketide synthase dehydratase J4048_RS07415 PF08659 KR domain J4048_RS07420 PF00668 Condensation domain J4048_RS07420 PF13193 AMP-binding enzyme C-terminal domain J4048_RS07420 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS07420 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS07420 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS07420 PF08659 KR domain J4048_RS07420 PF00550 Phosphopantetheine attachment site J4048_RS07420 PF14765 Polyketide synthase dehydratase J4048_RS07420 PF00501 AMP-binding enzyme J4048_RS07425 PF00144 Beta-lactamase J4048_RS07425 PF11954 Domain of unknown function (DUF3471) J4048_RS07430 PF00676 Dehydrogenase E1 component J4048_RS07435 PF02779 Transketolase, pyrimidine binding domain J4048_RS07435 PF02780 Transketolase, C-terminal domain J4048_RS07440 PF02817 e3 binding domain J4048_RS07440 PF00364 Biotin-requiring enzyme J4048_RS07440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4048_RS07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS07445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4048_RS07460 PF13790 SR1 protein J4048_RS07465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4048_RS07465 PF01276 Orn/Lys/Arg decarboxylase, major domain J4048_RS07470 PF05256 Uncharacterised protein family (UPF0223) J4048_RS07475 PF06335 Protein of unknown function (DUF1054) J4048_RS07485 PF00459 Inositol monophosphatase family J4048_RS07490 PF00583 Acetyltransferase (GNAT) family J4048_RS07495 PF07504 Fungalysin/Thermolysin Propeptide Motif J4048_RS07495 PF03413 Peptidase propeptide and YPEB domain J4048_RS07495 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4048_RS07495 PF01447 Thermolysin metallopeptidase, catalytic domain J4048_RS07515 PF13490 Putative zinc-finger J4048_RS07525 PF17259 Family of unknown function (DUF5325) J4048_RS07530 PF03144 Elongation factor Tu domain 2 J4048_RS07530 PF14492 Elongation Factor G, domain II J4048_RS07530 PF00679 Elongation factor G C-terminus J4048_RS07530 PF00009 Elongation factor Tu GTP binding domain J4048_RS07535 PF14036 YlaH-like protein J4048_RS07540 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) J4048_RS07545 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4048_RS07550 PF13638 PIN domain J4048_RS07550 PF02562 PhoH-like protein J4048_RS07560 PF04960 Glutaminase J4048_RS07565 PF07408 Protein of unknown function (DUF1507) J4048_RS07570 PF01098 Cell cycle protein J4048_RS07575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4048_RS07575 PF00682 HMGL-like J4048_RS07575 PF02436 Conserved carboxylase domain J4048_RS07575 PF00289 Biotin carboxylase, N-terminal domain J4048_RS07575 PF00364 Biotin-requiring enzyme J4048_RS07575 PF02785 Biotin carboxylase C-terminal domain J4048_RS07580 PF02628 Cytochrome oxidase assembly protein J4048_RS07585 PF01040 UbiA prenyltransferase family J4048_RS07590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4048_RS07590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4048_RS07590 PF00034 Cytochrome c J4048_RS07595 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4048_RS07600 PF00510 Cytochrome c oxidase subunit III J4048_RS07605 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4048_RS07610 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) J4048_RS07615 PF08868 YugN-like family J4048_RS07620 PF00571 CBS domain J4048_RS07625 PF00188 Cysteine-rich secretory protein family J4048_RS07625 PF14504 CAP-associated N-terminal J4048_RS07630 PF14071 Putative coat protein J4048_RS07635 PF14003 YlbE-like protein J4048_RS07640 PF06133 Control of competence regulator ComK, YlbF/YmcA J4048_RS07645 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) J4048_RS07655 PF01467 Cytidylyltransferase-like J4048_RS07660 PF07670 Nucleoside recognition J4048_RS07665 PF01734 Patatin-like phospholipase J4048_RS07670 PF05362 Lon protease (S16) C-terminal proteolytic domain J4048_RS07670 PF13180 PDZ domain J4048_RS07675 PF05636 HIGH Nucleotidyl Transferase J4048_RS07680 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4048_RS07685 PF01783 Ribosomal L32p protein family J4048_RS07695 PF00583 Acetyltransferase (GNAT) family J4048_RS07700 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4048_RS07700 PF02558 Ketopantoate reductase PanE/ApbA J4048_RS07705 PF10079 Bacillithiol biosynthesis BshC J4048_RS07710 PF02381 MraZ protein, putative antitoxin-like J4048_RS07715 PF01795 MraW methylase family J4048_RS07725 PF03793 PASTA domain J4048_RS07725 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS07725 PF00905 Penicillin binding protein transpeptidase domain J4048_RS07730 PF00905 Penicillin binding protein transpeptidase domain J4048_RS07730 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS07730 PF03793 PASTA domain J4048_RS07735 PF01225 Mur ligase family, catalytic domain J4048_RS07735 PF02875 Mur ligase family, glutamate ligase domain J4048_RS07735 PF08245 Mur ligase middle domain J4048_RS07740 PF00953 Glycosyl transferase family 4 J4048_RS07740 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4048_RS07745 PF02875 Mur ligase family, glutamate ligase domain J4048_RS07745 PF08245 Mur ligase middle domain J4048_RS07750 PF01098 Cell cycle protein J4048_RS07755 PF03033 Glycosyltransferase family 28 N-terminal domain J4048_RS07755 PF04101 Glycosyltransferase family 28 C-terminal domain J4048_RS07760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4048_RS07760 PF01565 FAD binding domain J4048_RS07765 PF08478 POTRA domain, FtsQ-type J4048_RS07770 PF02491 SHS2 domain inserted in FTSA J4048_RS07775 PF12327 FtsZ family, C-terminal domain J4048_RS07775 PF00091 Tubulin/FtsZ family, GTPase domain J4048_RS07780 PF05922 Peptidase inhibitor I9 J4048_RS07780 PF00082 Subtilase family J4048_RS07785 PF03419 Sporulation factor SpoIIGA J4048_RS07790 PF04542 Sigma-70 region 2 J4048_RS07790 PF04545 Sigma-70, region 4 J4048_RS07795 PF04542 Sigma-70 region 2 J4048_RS07795 PF04539 Sigma-70 region 3 J4048_RS07795 PF04545 Sigma-70, region 4 J4048_RS07800 PF00005 ABC transporter J4048_RS07805 PF07687 Peptidase dimerisation domain J4048_RS07805 PF01546 Peptidase family M20/M25/M40 J4048_RS07810 PF05239 PRC-barrel domain J4048_RS07815 PF02578 Multi-copper polyphenol oxidoreductase laccase J4048_RS07820 PF01168 Alanine racemase, N-terminal domain J4048_RS07825 PF04472 Cell division protein SepF J4048_RS07830 PF02325 YGGT family J4048_RS07835 PF01479 S4 domain J4048_RS07835 PF17774 Putative RNA-binding domain in YlmH J4048_RS07840 PF05103 DivIVA protein J4048_RS07845 PF08264 Anticodon-binding domain of tRNA J4048_RS07845 PF00133 tRNA synthetases class I (I, L, M and V) J4048_RS07850 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4048_RS07855 PF01252 Signal peptidase (SPase) II J4048_RS07860 PF00849 RNA pseudouridylate synthase J4048_RS07860 PF01479 S4 domain J4048_RS07865 PF00156 Phosphoribosyl transferase domain J4048_RS07870 PF00860 Permease family J4048_RS07875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4048_RS07875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4048_RS07880 PF01979 Amidohydrolase family J4048_RS07885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4048_RS07885 PF00117 Glutamine amidotransferase class-I J4048_RS07890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4048_RS07890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4048_RS07890 PF02142 MGS-like domain J4048_RS07895 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J4048_RS07895 PF00175 Oxidoreductase NAD-binding domain J4048_RS07900 PF01180 Dihydroorotate dehydrogenase J4048_RS07905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4048_RS07910 PF00156 Phosphoribosyl transferase domain J4048_RS07915 PF01507 Phosphoadenosine phosphosulfate reductase family J4048_RS07920 PF01384 Phosphate transporter family J4048_RS07925 PF14306 PUA-like domain J4048_RS07925 PF01747 ATP-sulfurylase J4048_RS07935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4048_RS07940 PF01903 CbiX J4048_RS07950 PF05670 NFACT protein RNA binding domain J4048_RS07955 PF00690 Cation transporter/ATPase, N-terminus J4048_RS07955 PF00689 Cation transporting ATPase, C-terminus J4048_RS07960 PF03755 YicC-like family, N-terminal region J4048_RS07960 PF08340 Domain of unknown function (DUF1732) J4048_RS07965 PF04025 Domain of unknown function (DUF370) J4048_RS07970 PF00625 Guanylate kinase J4048_RS07975 PF01192 RNA polymerase Rpb6 J4048_RS07980 PF04127 DNA / pantothenate metabolism flavoprotein J4048_RS07980 PF02441 Flavoprotein J4048_RS07985 PF00271 Helicase conserved C-terminal domain J4048_RS07985 PF17764 3′ DNA-binding domain (3′BD) J4048_RS07985 PF18074 Primosomal protein N C-terminal domain J4048_RS07985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4048_RS07985 PF04851 Type III restriction enzyme, res subunit J4048_RS07990 PF01327 Polypeptide deformylase J4048_RS07995 PF02911 Formyl transferase, C-terminal domain J4048_RS07995 PF00551 Formyl transferase J4048_RS08000 PF01029 NusB family J4048_RS08000 PF01189 16S rRNA methyltransferase RsmB/F J4048_RS08005 PF04055 Radical SAM superfamily J4048_RS08015 PF03793 PASTA domain J4048_RS08015 PF00069 Protein kinase domain J4048_RS08020 PF03193 RsgA GTPase J4048_RS08020 PF16745 RsgA N-terminal domain J4048_RS08025 PF00834 Ribulose-phosphate 3 epimerase family J4048_RS08030 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain J4048_RS08030 PF04263 Thiamin pyrophosphokinase, catalytic domain J4048_RS08035 PF08183 Stage V sporulation protein family J4048_RS08040 PF00830 Ribosomal L28 family J4048_RS08045 PF03780 Asp23 family, cell envelope-related function J4048_RS08050 PF13684 Dihydroxyacetone kinase family J4048_RS08050 PF02734 DAK2 domain J4048_RS08055 PF01842 ACT domain J4048_RS08055 PF03315 Serine dehydratase beta chain J4048_RS08060 PF03313 Serine dehydratase alpha chain J4048_RS08065 PF00270 DEAD/DEAH box helicase J4048_RS08065 PF00271 Helicase conserved C-terminal domain J4048_RS08065 PF17191 RecG wedge domain J4048_RS08070 PF03061 Thioesterase superfamily J4048_RS08075 PF02504 Fatty acid synthesis protein J4048_RS08080 PF00698 Acyl transferase domain J4048_RS08090 PF00550 Phosphopantetheine attachment site J4048_RS08095 PF00035 Double-stranded RNA binding motif J4048_RS08095 PF14622 Ribonuclease-III-like J4048_RS08100 PF06470 SMC proteins Flexible Hinge Domain J4048_RS08100 PF02463 RecF/RecN/SMC N terminal domain J4048_RS08105 PF00448 SRP54-type protein, GTPase domain J4048_RS08105 PF02881 SRP54-type protein, helical bundle domain J4048_RS08115 PF04297 Putative helix-turn-helix protein, YlxM / p13 like J4048_RS08120 PF00448 SRP54-type protein, GTPase domain J4048_RS08120 PF02881 SRP54-type protein, helical bundle domain J4048_RS08120 PF02978 Signal peptide binding domain J4048_RS08125 PF00886 Ribosomal protein S16 J4048_RS08135 PF11068 YlqD protein J4048_RS08140 PF05239 PRC-barrel domain J4048_RS08140 PF01782 RimM N-terminal domain J4048_RS08145 PF01746 tRNA (Guanine-1)-methyltransferase J4048_RS08150 PF01245 Ribosomal protein L19 J4048_RS08155 PF01926 50S ribosome-binding GTPase J4048_RS08160 PF01351 Ribonuclease HII J4048_RS08170 PF01312 FlhB HrpN YscU SpaS Family J4048_RS08175 PF08442 ATP-grasp domain J4048_RS08175 PF00549 CoA-ligase J4048_RS08180 PF02629 CoA binding domain J4048_RS08180 PF00549 CoA-ligase J4048_RS08185 PF02481 DNA recombination-mediator protein A J4048_RS08190 PF01751 Toprim domain J4048_RS08190 PF01396 Topoisomerase DNA binding C4 zinc finger J4048_RS08190 PF01131 DNA topoisomerase J4048_RS08195 PF01134 Glucose inhibited division protein A J4048_RS08200 PF02899 Phage integrase, N-terminal SAM-like domain J4048_RS08200 PF00589 Phage integrase family J4048_RS08205 PF00227 Proteasome subunit J4048_RS08210 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS08210 PF07724 AAA domain (Cdc48 subfamily) J4048_RS08210 PF10431 C-terminal, D2-small domain, of ClpB protein J4048_RS08215 PF06018 CodY GAF-like domain J4048_RS08215 PF08222 CodY helix-turn-helix domain J4048_RS08220 PF00460 Flagella basal body rod protein J4048_RS08225 PF00460 Flagella basal body rod protein J4048_RS08225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4048_RS08230 PF02049 Flagellar hook-basal body complex protein FliE J4048_RS08235 PF08345 Flagellar M-ring protein C-terminal J4048_RS08235 PF01514 Secretory protein of YscJ/FliF family J4048_RS08240 PF14841 FliG middle domain J4048_RS08240 PF14842 FliG N-terminal domain J4048_RS08240 PF01706 FliG C-terminal domain J4048_RS08245 PF02108 Flagellar assembly protein FliH J4048_RS08250 PF18269 T3SS EscN ATPase C-terminal domain J4048_RS08250 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4048_RS08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4048_RS08255 PF02050 Flagellar FliJ protein J4048_RS08260 PF03448 MgtE intracellular N domain J4048_RS08265 PF02120 Flagellar hook-length control protein FliK J4048_RS08270 PF03963 Flagellar hook capping protein - N-terminal region J4048_RS08275 PF00460 Flagella basal body rod protein J4048_RS08275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4048_RS08280 PF06289 Flagellar and Swarming motility proteins J4048_RS08285 PF03748 Flagellar basal body-associated protein FliL J4048_RS08290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4048_RS08290 PF02154 Flagellar motor switch protein FliM J4048_RS08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4048_RS08295 PF04509 CheC-like family J4048_RS08300 PF00072 Response regulator receiver domain J4048_RS08305 PF04347 Flagellar biosynthesis protein, FliO J4048_RS08310 PF00813 FliP family J4048_RS08315 PF01313 Bacterial export proteins, family 3 J4048_RS08320 PF01311 Bacterial export proteins, family 1 J4048_RS08325 PF01312 FlhB HrpN YscU SpaS Family J4048_RS08330 PF00771 FHIPEP family J4048_RS08335 PF00448 SRP54-type protein, GTPase domain J4048_RS08340 PF10609 NUBPL iron-transfer P-loop NTPase J4048_RS08345 PF01339 CheB methylesterase J4048_RS08345 PF00072 Response regulator receiver domain J4048_RS08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS08350 PF07194 P2 response regulator binding domain J4048_RS08350 PF01584 CheW-like domain J4048_RS08350 PF02895 Signal transducing histidine kinase, homodimeric domain J4048_RS08350 PF01627 Hpt domain J4048_RS08355 PF01584 CheW-like domain J4048_RS08360 PF04509 CheC-like family J4048_RS08365 PF03975 CheD chemotactic sensory transduction J4048_RS08370 PF04542 Sigma-70 region 2 J4048_RS08370 PF04539 Sigma-70 region 3 J4048_RS08370 PF04545 Sigma-70, region 4 J4048_RS08380 PF00318 Ribosomal protein S2 J4048_RS08385 PF00889 Elongation factor TS J4048_RS08390 PF00696 Amino acid kinase family J4048_RS08395 PF01765 Ribosome recycling factor J4048_RS08400 PF01255 Putative undecaprenyl diphosphate synthase J4048_RS08410 PF13288 DXP reductoisomerase C-terminal domain J4048_RS08410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4048_RS08410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4048_RS08415 PF02163 Peptidase family M50 J4048_RS08415 PF17820 PDZ domain J4048_RS08420 PF03129 Anticodon binding domain J4048_RS08420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4048_RS08420 PF04073 Aminoacyl-tRNA editing domain J4048_RS08425 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4048_RS08425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4048_RS08425 PF14480 DNA polymerase III polC-type N-terminus I J4048_RS08425 PF11490 DNA polymerase III polC-type N-terminus II J4048_RS08425 PF14579 Helix-hairpin-helix motif J4048_RS08425 PF00929 Exonuclease J4048_RS08425 PF02811 PHP domain J4048_RS08430 PF02576 RimP N-terminal domain J4048_RS08430 PF17384 RimP C-terminal SH3 domain J4048_RS08435 PF13184 NusA-like KH domain J4048_RS08435 PF08529 NusA N-terminal domain J4048_RS08435 PF00575 S1 RNA binding domain J4048_RS08440 PF04296 Protein of unknown function (DUF448) J4048_RS08445 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family J4048_RS08450 PF11987 Translation-initiation factor 2 J4048_RS08450 PF00009 Elongation factor Tu GTP binding domain J4048_RS08450 PF04760 Translation initiation factor IF-2, N-terminal region J4048_RS08455 PF04456 Protein of unknown function (DUF503) J4048_RS08460 PF02033 Ribosome-binding factor A J4048_RS08465 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4048_RS08465 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4048_RS08470 PF01687 Riboflavin kinase J4048_RS08470 PF06574 FAD synthetase J4048_RS08475 PF00312 Ribosomal protein S15 J4048_RS08480 PF00013 KH domain J4048_RS08480 PF01138 3' exoribonuclease family, domain 1 J4048_RS08480 PF03725 3' exoribonuclease family, domain 2 J4048_RS08480 PF00575 S1 RNA binding domain J4048_RS08480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4048_RS08485 PF01522 Polysaccharide deacetylase J4048_RS08490 PF00675 Insulinase (Peptidase family M16) J4048_RS08490 PF05193 Peptidase M16 inactive domain J4048_RS08495 PF05239 PRC-barrel domain J4048_RS08500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4048_RS08500 PF16924 Dipicolinate synthase subunit A N-terminal domain J4048_RS08505 PF02441 Flavoprotein J4048_RS08510 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4048_RS08510 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4048_RS08515 PF00696 Amino acid kinase family J4048_RS08515 PF13840 ACT domain J4048_RS08520 PF00701 Dihydrodipicolinate synthetase family J4048_RS08525 PF00753 Metallo-beta-lactamase superfamily J4048_RS08525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4048_RS08525 PF17770 Ribonuclease J C-terminal domain J4048_RS08530 PF00574 Clp protease J4048_RS08535 PF14035 YlzJ-like protein J4048_RS08540 PF17854 FtsK alpha domain J4048_RS08540 PF09397 Ftsk gamma domain J4048_RS08540 PF01580 FtsK/SpoIIIE family J4048_RS08545 PF00392 Bacterial regulatory proteins, gntR family J4048_RS08545 PF07702 UTRA domain J4048_RS08550 PF07690 Major Facilitator Superfamily J4048_RS08555 PF01047 MarR family J4048_RS08560 PF03176 MMPL family J4048_RS08565 PF05193 Peptidase M16 inactive domain J4048_RS08570 PF00675 Insulinase (Peptidase family M16) J4048_RS08570 PF05193 Peptidase M16 inactive domain J4048_RS08580 PF11588 Protein of unknown function (DUF3243) J4048_RS08585 PF11868 Protein of unknown function (DUF3388) J4048_RS08590 PF13464 Domain of unknown function (DUF4115) J4048_RS08595 PF01066 CDP-alcohol phosphatidyltransferase J4048_RS08600 PF02464 Competence-damaged protein J4048_RS08600 PF18146 Damage-inducible protein CinA KH domain J4048_RS08600 PF00994 Probable molybdopterin binding domain J4048_RS08605 PF00154 recA bacterial DNA recombination protein J4048_RS08610 PF00144 Beta-lactamase J4048_RS08615 PF01966 HD domain J4048_RS08615 PF00013 KH domain J4048_RS08615 PF12072 Domain of unknown function (DUF3552) J4048_RS08620 PF13277 YmdB-like protein J4048_RS08625 PF04232 Stage V sporulation protein S (SpoVS) J4048_RS08630 PF00107 Zinc-binding dehydrogenase J4048_RS08630 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS08635 PF00155 Aminotransferase class I and II J4048_RS08640 PF00919 Uncharacterized protein family UPF0004 J4048_RS08640 PF01938 TRAM domain J4048_RS08640 PF04055 Radical SAM superfamily J4048_RS08645 PF06133 Control of competence regulator ComK, YlbF/YmcA J4048_RS08650 PF10628 Outer spore coat protein E (CotE) J4048_RS08655 PF01624 MutS domain I J4048_RS08655 PF05188 MutS domain II J4048_RS08655 PF05192 MutS domain III J4048_RS08655 PF05190 MutS family domain IV J4048_RS08655 PF00488 MutS domain V J4048_RS08660 PF01119 DNA mismatch repair protein, C-terminal domain J4048_RS08660 PF08676 MutL C terminal dimerisation domain J4048_RS08665 PF14659 Phage integrase, N-terminal SAM-like domain J4048_RS08665 PF00589 Phage integrase family J4048_RS08685 PF00753 Metallo-beta-lactamase superfamily J4048_RS08690 PF00698 Acyl transferase domain J4048_RS08695 PF00698 Acyl transferase domain J4048_RS08700 PF00698 Acyl transferase domain J4048_RS08705 PF00550 Phosphopantetheine attachment site J4048_RS08710 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal J4048_RS08710 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal J4048_RS08715 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS08720 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS08725 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08725 PF00550 Phosphopantetheine attachment site J4048_RS08725 PF14765 Polyketide synthase dehydratase J4048_RS08725 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08725 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08725 PF00668 Condensation domain J4048_RS08725 PF08659 KR domain J4048_RS08725 PF00501 AMP-binding enzyme J4048_RS08725 PF13193 AMP-binding enzyme C-terminal domain J4048_RS08730 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08730 PF08659 KR domain J4048_RS08730 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08730 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08730 PF14765 Polyketide synthase dehydratase J4048_RS08730 PF00550 Phosphopantetheine attachment site J4048_RS08735 PF14765 Polyketide synthase dehydratase J4048_RS08735 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08735 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08735 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08735 PF08659 KR domain J4048_RS08735 PF08242 Methyltransferase domain J4048_RS08735 PF00550 Phosphopantetheine attachment site J4048_RS08735 PF14765 Polyketide synthase dehydratase J4048_RS08735 PF08242 Methyltransferase domain J4048_RS08735 PF08659 KR domain J4048_RS08735 PF00550 Phosphopantetheine attachment site J4048_RS08735 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08735 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08735 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08740 PF08659 KR domain J4048_RS08740 PF14765 Polyketide synthase dehydratase J4048_RS08740 PF00501 AMP-binding enzyme J4048_RS08740 PF13193 AMP-binding enzyme C-terminal domain J4048_RS08740 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08740 PF00668 Condensation domain J4048_RS08740 PF00550 Phosphopantetheine attachment site J4048_RS08740 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08740 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08745 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS08745 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS08745 PF08242 Methyltransferase domain J4048_RS08745 PF00550 Phosphopantetheine attachment site J4048_RS08745 PF14765 Polyketide synthase dehydratase J4048_RS08745 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS08745 PF00975 Thioesterase domain J4048_RS08750 PF00067 Cytochrome P450 J4048_RS08755 PF14040 Deoxyribonuclease NucA/NucB J4048_RS08760 PF06912 Protein of unknown function (DUF1275) J4048_RS08770 PF00082 Subtilase family J4048_RS08780 PF05908 Poly-gamma-glutamate hydrolase J4048_RS08785 PF02566 OsmC-like protein J4048_RS08790 PF00893 Small Multidrug Resistance protein J4048_RS08795 PF00893 Small Multidrug Resistance protein J4048_RS08805 PF12788 YmaF family J4048_RS08815 PF17209 Hfq protein J4048_RS08820 PF14157 YmzC-like protein J4048_RS08830 PF07972 NrdI Flavodoxin like J4048_RS08835 PF02867 Ribonucleotide reductase, barrel domain J4048_RS08835 PF00317 Ribonucleotide reductase, all-alpha domain J4048_RS08835 PF08343 Ribonucleotide reductase N-terminal J4048_RS08840 PF00268 Ribonucleotide reductase, small chain J4048_RS08850 PF01520 N-acetylmuramoyl-L-alanine amidase J4048_RS08850 PF05036 Sporulation related domain J4048_RS08855 PF17866 AAA lid domain J4048_RS08855 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS08860 PF16360 GTP-binding GTPase Middle Region J4048_RS08860 PF13167 GTP-binding GTPase N-terminal J4048_RS08860 PF01926 50S ribosome-binding GTPase J4048_RS08865 PF06838 Methionine gamma-lyase J4048_RS08870 PF13411 MerR HTH family regulatory protein J4048_RS08875 PF00120 Glutamine synthetase, catalytic domain J4048_RS08875 PF03951 Glutamine synthetase, beta-Grasp domain J4048_RS08885 PF09346 SMI1 / KNR4 family (SUKH-1) J4048_RS08915 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain J4048_RS08915 PF04616 Glycosyl hydrolases family 43 J4048_RS08920 PF00480 ROK family J4048_RS08925 PF01261 Xylose isomerase-like TIM barrel J4048_RS08930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4048_RS08930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4048_RS08935 PF00391 PEP-utilising enzyme, mobile domain J4048_RS08935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4048_RS08955 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS08955 PF00107 Zinc-binding dehydrogenase J4048_RS08970 PF17094 Uncharacterised protein family (UPF0715) J4048_RS08975 PF00583 Acetyltransferase (GNAT) family J4048_RS08975 PF14268 YoaP-like J4048_RS08985 PF13021 Domain of unknown function (DUF3885) J4048_RS08995 PF18416 N-acetylglucosamine binding protein domain 2 J4048_RS08995 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4048_RS09000 PF09680 Family of unknown function J4048_RS09005 PF13302 Acetyltransferase (GNAT) domain J4048_RS09020 PF12708 Pectate lyase superfamily protein J4048_RS09020 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain J4048_RS09025 PF00692 dUTPase J4048_RS09035 PF05908 Poly-gamma-glutamate hydrolase J4048_RS09050 PF10710 Protein of unknown function (DUF2512) J4048_RS09060 PF01726 LexA DNA binding domain J4048_RS09060 PF00717 Peptidase S24-like J4048_RS09065 PF01476 LysM domain J4048_RS09070 PF00239 Resolvase, N terminal domain J4048_RS09075 PF05979 Bacterial protein of unknown function (DUF896) J4048_RS09080 PF00456 Transketolase, thiamine diphosphate binding domain J4048_RS09080 PF02780 Transketolase, C-terminal domain J4048_RS09080 PF02779 Transketolase, pyrimidine binding domain J4048_RS09085 PF10747 Sporulation inhibitor of replication protein SirA J4048_RS09090 PF03672 Uncharacterised protein family (UPF0154) J4048_RS09095 PF09388 Spo0E like sporulation regulatory protein J4048_RS09100 PF02683 Cytochrome C biogenesis protein transmembrane region J4048_RS09105 PF00072 Response regulator receiver domain J4048_RS09110 PF07301 Protein of unknown function (DUF1453) J4048_RS09115 PF11084 Protein of unknown function (DUF2621) J4048_RS09125 PF08179 Small acid-soluble spore protein P family J4048_RS09135 PF00694 Aconitase C-terminal domain J4048_RS09135 PF00330 Aconitase family (aconitate hydratase) J4048_RS09140 PF00578 AhpC/TSA family J4048_RS09145 PF13040 Fur-regulated basic protein B J4048_RS09150 PF08177 Small acid-soluble spore protein N family J4048_RS09160 PF03061 Thioesterase superfamily J4048_RS09170 PF01521 Iron-sulphur cluster biosynthesis J4048_RS09175 PF02660 Glycerol-3-phosphate acyltransferase J4048_RS09180 PF13380 CoA binding domain J4048_RS09185 PF01751 Toprim domain J4048_RS09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS09185 PF00986 DNA gyrase B subunit, carboxyl terminus J4048_RS09185 PF00204 DNA gyrase B J4048_RS09190 PF00521 DNA gyrase/topoisomerase IV, subunit A J4048_RS09190 PF03989 DNA gyrase C-terminal domain, beta-propeller J4048_RS09200 PF01235 Sodium:alanine symporter family J4048_RS09205 PF00294 pfkB family carbohydrate kinase J4048_RS09210 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS09210 PF00107 Zinc-binding dehydrogenase J4048_RS09215 PF01081 KDPG and KHG aldolase J4048_RS09220 PF03786 D-mannonate dehydratase (UxuA) J4048_RS09225 PF00106 short chain dehydrogenase J4048_RS09230 PF00356 Bacterial regulatory proteins, lacI family J4048_RS09235 PF07690 Major Facilitator Superfamily J4048_RS09245 PF13761 Domain of unknown function (DUF4166) J4048_RS09250 PF14158 YndJ-like protein J4048_RS09275 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS09305 PF02687 FtsX-like permease family J4048_RS09305 PF12704 MacB-like periplasmic core domain J4048_RS09305 PF00005 ABC transporter J4048_RS09325 PF00150 Cellulase (glycosyl hydrolase family 5) J4048_RS09325 PF00942 Cellulose binding domain J4048_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS09335 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS09340 PF00486 Transcriptional regulatory protein, C terminal J4048_RS09340 PF00072 Response regulator receiver domain J4048_RS09345 PF17189 Glycosyl hydrolase family 30 beta sandwich domain J4048_RS09345 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain J4048_RS09350 PF04616 Glycosyl hydrolases family 43 J4048_RS09350 PF03422 Carbohydrate binding module (family 6) J4048_RS09355 PF00975 Thioesterase domain J4048_RS09355 PF00550 Phosphopantetheine attachment site J4048_RS09355 PF00668 Condensation domain J4048_RS09355 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09355 PF00501 AMP-binding enzyme J4048_RS09360 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09360 PF00668 Condensation domain J4048_RS09360 PF00501 AMP-binding enzyme J4048_RS09360 PF00550 Phosphopantetheine attachment site J4048_RS09365 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS09365 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09365 PF00668 Condensation domain J4048_RS09365 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS09365 PF00550 Phosphopantetheine attachment site J4048_RS09365 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS09365 PF00501 AMP-binding enzyme J4048_RS09365 PF00202 Aminotransferase class-III J4048_RS09370 PF00698 Acyl transferase domain J4048_RS09380 PF01144 Coenzyme A transferase J4048_RS09385 PF01144 Coenzyme A transferase J4048_RS09395 PF00067 Cytochrome P450 J4048_RS09400 PF06968 Biotin and Thiamin Synthesis associated domain J4048_RS09400 PF04055 Radical SAM superfamily J4048_RS09410 PF00155 Aminotransferase class I and II J4048_RS09415 PF00202 Aminotransferase class-III J4048_RS09420 PF03744 6-carboxyhexanoate--CoA ligase J4048_RS09425 PF04138 GtrA-like protein J4048_RS09430 PF00483 Nucleotidyl transferase J4048_RS09435 PF09335 SNARE associated Golgi protein J4048_RS09440 PF01039 Carboxyl transferase domain J4048_RS09445 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS09450 PF00682 HMGL-like J4048_RS09455 PF00364 Biotin-requiring enzyme J4048_RS09460 PF00289 Biotin carboxylase, N-terminal domain J4048_RS09460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4048_RS09460 PF02785 Biotin carboxylase C-terminal domain J4048_RS09465 PF00501 AMP-binding enzyme J4048_RS09465 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4048_RS09470 PF02770 Acyl-CoA dehydrogenase, middle domain J4048_RS09470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4048_RS09475 PF02638 Glycosyl hydrolase-like 10 J4048_RS09480 PF07098 Protein of unknown function (DUF1360) J4048_RS09485 PF00975 Thioesterase domain J4048_RS09485 PF00550 Phosphopantetheine attachment site J4048_RS09485 PF00501 AMP-binding enzyme J4048_RS09485 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09485 PF00668 Condensation domain J4048_RS09490 PF00501 AMP-binding enzyme J4048_RS09490 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09490 PF00668 Condensation domain J4048_RS09490 PF00550 Phosphopantetheine attachment site J4048_RS09495 PF00668 Condensation domain J4048_RS09495 PF00550 Phosphopantetheine attachment site J4048_RS09495 PF00501 AMP-binding enzyme J4048_RS09495 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09500 PF00501 AMP-binding enzyme J4048_RS09500 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09500 PF00668 Condensation domain J4048_RS09500 PF00550 Phosphopantetheine attachment site J4048_RS09515 PF00501 AMP-binding enzyme J4048_RS09515 PF13193 AMP-binding enzyme C-terminal domain J4048_RS09515 PF00668 Condensation domain J4048_RS09515 PF00550 Phosphopantetheine attachment site J4048_RS09520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4048_RS09525 PF01263 Aldose 1-epimerase J4048_RS09530 PF01554 MatE J4048_RS09535 PF16800 IseA DL-endopeptidase inhibitor J4048_RS09545 PF00589 Phage integrase family J4048_RS09550 PF12728 Helix-turn-helix domain J4048_RS09560 PF07690 Major Facilitator Superfamily J4048_RS09570 PF03129 Anticodon binding domain J4048_RS09570 PF02824 TGS domain J4048_RS09570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4048_RS09570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4048_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS09575 PF03466 LysR substrate binding domain J4048_RS09580 PF00107 Zinc-binding dehydrogenase J4048_RS09580 PF08240 Alcohol dehydrogenase GroES-like domain J4048_RS09585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4048_RS09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS09590 PF01493 GXGXG motif J4048_RS09590 PF01645 Conserved region in glutamate synthase J4048_RS09590 PF04898 Glutamate synthase central domain J4048_RS09590 PF00310 Glutamine amidotransferases class-II J4048_RS09595 PF03466 LysR substrate binding domain J4048_RS09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS09600 PF00696 Amino acid kinase family J4048_RS09600 PF01472 PUA domain J4048_RS09605 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4048_RS09605 PF03807 NADP oxidoreductase coenzyme F420-dependent J4048_RS09610 PF02334 Replication terminator protein J4048_RS09615 PF00106 short chain dehydrogenase J4048_RS09620 PF06103 Bacterial protein of unknown function (DUF948) J4048_RS09630 PF07690 Major Facilitator Superfamily J4048_RS09635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4048_RS09635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4048_RS09640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4048_RS09640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4048_RS09645 PF01568 Molydopterin dinucleotide binding domain J4048_RS09645 PF00384 Molybdopterin oxidoreductase J4048_RS09645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4048_RS09670 PF04740 LXG domain of WXG superfamily J4048_RS09670 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4048_RS09675 PF01588 Putative tRNA binding domain J4048_RS09680 PF07883 Cupin domain J4048_RS09680 PF12833 Helix-turn-helix domain J4048_RS09685 PF13305 Tetracyclin repressor-like, C-terminal domain J4048_RS09685 PF00440 Bacterial regulatory proteins, tetR family J4048_RS09690 PF00753 Metallo-beta-lactamase superfamily J4048_RS09700 PF01022 Bacterial regulatory protein, arsR family J4048_RS09710 PF04238 Protein of unknown function (DUF420) J4048_RS09715 PF18846 Bacterial archaeo-eukaryotic release factor family 5 J4048_RS09725 PF02016 LD-carboxypeptidase N-terminal domain J4048_RS09725 PF17676 LD-carboxypeptidase C-terminal domain J4048_RS09735 PF06725 3D domain J4048_RS09735 PF01476 LysM domain J4048_RS09740 PF09382 RQC domain J4048_RS09740 PF16124 RecQ zinc-binding J4048_RS09740 PF00270 DEAD/DEAH box helicase J4048_RS09740 PF00271 Helicase conserved C-terminal domain J4048_RS09740 PF00570 HRDC domain J4048_RS09750 PF02525 Flavodoxin-like fold J4048_RS09755 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4048_RS09770 PF00011 Hsp20/alpha crystallin family J4048_RS09785 PF08000 Bacterial PH domain J4048_RS09800 PF00171 Aldehyde dehydrogenase family J4048_RS09810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4048_RS09810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4048_RS09815 PF00209 Sodium:neurotransmitter symporter family J4048_RS09820 PF01758 Sodium Bile acid symporter family J4048_RS09825 PF00753 Metallo-beta-lactamase superfamily J4048_RS09830 PF02817 e3 binding domain J4048_RS09830 PF00364 Biotin-requiring enzyme J4048_RS09830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4048_RS09835 PF00676 Dehydrogenase E1 component J4048_RS09835 PF16870 2-oxoglutarate dehydrogenase C-terminal J4048_RS09835 PF02779 Transketolase, pyrimidine binding domain J4048_RS09840 PF00092 von Willebrand factor type A domain J4048_RS09845 PF07728 AAA domain (dynein-related subfamily) J4048_RS09850 PF00080 Copper/zinc superoxide dismutase (SODC) J4048_RS09850 PF13627 Prokaryotic lipoprotein-attachment site J4048_RS09855 PF01476 LysM domain J4048_RS09855 PF00877 NlpC/P60 family J4048_RS09860 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase J4048_RS09865 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4048_RS09865 PF10372 Bacterial membrane-spanning protein N-terminus J4048_RS09870 PF01554 MatE J4048_RS09875 PF01740 STAS domain J4048_RS09880 PF02585 GlcNAc-PI de-N-acetylase J4048_RS09885 PF08830 Protein of unknown function (DUF1806) J4048_RS09895 PF00892 EamA-like transporter family J4048_RS09910 PF14552 Tautomerase enzyme J4048_RS09920 PF01638 HxlR-like helix-turn-helix J4048_RS09925 PF00881 Nitroreductase family J4048_RS09930 PF01738 Dienelactone hydrolase family J4048_RS09935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS09940 PF11755 Protein of unknown function (DUF3311) J4048_RS09945 PF00474 Sodium:solute symporter family J4048_RS09955 PF00232 Glycosyl hydrolase family 1 J4048_RS09960 PF00392 Bacterial regulatory proteins, gntR family J4048_RS09960 PF07702 UTRA domain J4048_RS09965 PF17820 PDZ domain J4048_RS09965 PF03572 Peptidase family S41 J4048_RS09965 PF01471 Putative peptidoglycan binding domain J4048_RS09970 PF08241 Methyltransferase domain J4048_RS09980 PF02557 D-alanyl-D-alanine carboxypeptidase J4048_RS09985 PF01048 Phosphorylase superfamily J4048_RS09995 PF14191 YodL-like J4048_RS10000 PF01569 PAP2 superfamily J4048_RS10005 PF14162 YozD-like protein J4048_RS10025 PF06855 YozE SAM-like fold J4048_RS10030 PF14122 YokU-like protein, putative antitoxin J4048_RS10035 PF12544 Lysine-2,3-aminomutase J4048_RS10040 PF00583 Acetyltransferase (GNAT) family J4048_RS10045 PF07687 Peptidase dimerisation domain J4048_RS10045 PF01546 Peptidase family M20/M25/M40 J4048_RS10050 PF01144 Coenzyme A transferase J4048_RS10055 PF01144 Coenzyme A transferase J4048_RS10060 PF00202 Aminotransferase class-III J4048_RS10065 PF06445 GyrI-like small molecule binding domain J4048_RS10075 PF00583 Acetyltransferase (GNAT) family J4048_RS10080 PF00535 Glycosyl transferase family 2 J4048_RS10095 PF12996 DUF based on E. rectale Gene description (DUF3880) J4048_RS10100 PF02333 Phytase J4048_RS10105 PF08485 Polysaccharide biosynthesis protein C-terminal J4048_RS10105 PF02719 Polysaccharide biosynthesis protein J4048_RS10115 PF11518 Protein of unknown function (DUF3221) J4048_RS10145 PF14037 YoqO-like protein J4048_RS10155 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS10175 PF04740 LXG domain of WXG superfamily J4048_RS10175 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH J4048_RS10185 PF00565 Staphylococcal nuclease homologue J4048_RS10185 PF05901 Excalibur calcium-binding domain J4048_RS10190 PF07508 Recombinase J4048_RS10190 PF00239 Resolvase, N terminal domain J4048_RS10195 PF02719 Polysaccharide biosynthesis protein J4048_RS10200 PF01641 SelR domain J4048_RS10205 PF01625 Peptide methionine sulfoxide reductase J4048_RS10210 PF01047 MarR family J4048_RS10215 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) J4048_RS10220 PF13472 GDSL-like Lipase/Acylhydrolase family J4048_RS10225 PF02630 SCO1/SenC J4048_RS10230 PF10751 Protein of unknown function (DUF2535) J4048_RS10235 PF00585 C-terminal regulatory domain of Threonine dehydratase J4048_RS10235 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS10240 PF00158 Sigma-54 interaction domain J4048_RS10240 PF08461 Ribonuclease R winged-helix domain J4048_RS10245 PF03006 Haemolysin-III related J4048_RS10260 PF00186 Dihydrofolate reductase J4048_RS10265 PF00303 Thymidylate synthase J4048_RS10270 PF14005 YpjP-like protein J4048_RS10275 PF04445 Putative SAM-dependent methyltransferase J4048_RS10280 PF06491 Disulphide isomerase J4048_RS10285 PF00920 Dehydratase family J4048_RS10290 PF08712 Scaffold protein Nfu/NifU N terminal J4048_RS10290 PF13769 Virulence factor J4048_RS10300 PF00255 Glutathione peroxidase J4048_RS10305 PF04204 Homoserine O-succinyltransferase J4048_RS10310 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase J4048_RS10310 PF00534 Glycosyl transferases group 1 J4048_RS10320 PF00313 'Cold-shock' DNA-binding domain J4048_RS10330 PF10819 Protein of unknown function (DUF2564) J4048_RS10335 PF10782 Zinc-finger J4048_RS10340 PF13456 Reverse transcriptase-like J4048_RS10345 PF02592 Putative vitamin uptake transporter J4048_RS10350 PF13456 Reverse transcriptase-like J4048_RS10360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4048_RS10360 PF01367 5'-3' exonuclease, C-terminal SAM fold J4048_RS10370 PF10752 Protein of unknown function (DUF2533) J4048_RS10375 PF00350 Dynamin family J4048_RS10385 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J4048_RS10390 PF02797 Chalcone and stilbene synthases, C-terminal domain J4048_RS10390 PF00195 Chalcone and stilbene synthases, N-terminal domain J4048_RS10415 PF00857 Isochorismatase family J4048_RS10440 PF13443 Cro/C1-type HTH DNA-binding domain J4048_RS10485 PF00149 Calcineurin-like phosphoesterase J4048_RS10520 PF00186 Dihydrofolate reductase J4048_RS10525 PF00303 Thymidylate synthase J4048_RS10555 PF00085 Thioredoxin J4048_RS10560 PF00268 Ribonucleotide reductase, small chain J4048_RS10570 PF02867 Ribonucleotide reductase, barrel domain J4048_RS10570 PF14528 LAGLIDADG-like domain J4048_RS10570 PF00317 Ribonucleotide reductase, all-alpha domain J4048_RS10570 PF08343 Ribonucleotide reductase N-terminal J4048_RS10575 PF07972 NrdI Flavodoxin like J4048_RS10640 PF00145 C-5 cytosine-specific DNA methylase J4048_RS10655 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) J4048_RS10660 PF02223 Thymidylate kinase J4048_RS10670 PF09629 YorP protein J4048_RS10675 PF06725 3D domain J4048_RS10680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4048_RS10680 PF14579 Helix-hairpin-helix motif J4048_RS10680 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4048_RS10680 PF02811 PHP domain J4048_RS10685 PF01368 DHH family J4048_RS10685 PF17768 RecJ OB domain J4048_RS10695 PF03796 DnaB-like helicase C terminal domain J4048_RS10725 PF13229 Right handed beta helix region J4048_RS10730 PF05908 Poly-gamma-glutamate hydrolase J4048_RS10740 PF09643 YopX protein J4048_RS10760 PF02586 SOS response associated peptidase (SRAP) J4048_RS10765 PF01068 ATP dependent DNA ligase domain J4048_RS10785 PF14037 YoqO-like protein J4048_RS10850 PF09643 YopX protein J4048_RS10870 PF13443 Cro/C1-type HTH DNA-binding domain J4048_RS10880 PF14072 DNA-sulfur modification-associated J4048_RS10990 PF13443 Cro/C1-type HTH DNA-binding domain J4048_RS10995 PF13443 Cro/C1-type HTH DNA-binding domain J4048_RS11010 PF01757 Acyltransferase family J4048_RS11075 PF00216 Bacterial DNA-binding protein J4048_RS11090 PF09642 YonK protein J4048_RS11185 PF09693 Phage uncharacterised protein (Phage_XkdX) J4048_RS11225 PF01551 Peptidase family M23 J4048_RS11225 PF10145 Phage-related minor tail protein J4048_RS11225 PF01464 Transglycosylase SLT domain J4048_RS11230 PF05709 Phage tail protein J4048_RS11235 PF06605 Prophage endopeptidase tail J4048_RS11245 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain J4048_RS11245 PF12708 Pectate lyase superfamily protein J4048_RS11250 PF01510 N-acetylmuramoyl-L-alanine amidase J4048_RS11250 PF01471 Putative peptidoglycan binding domain J4048_RS11270 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS11275 PF00817 impB/mucB/samB family J4048_RS11275 PF11799 impB/mucB/samB family C-terminal domain J4048_RS11275 PF11798 IMS family HHH motif J4048_RS11280 PF08863 YolD-like protein J4048_RS11285 PF09560 Sporulation protein YunB (Spo_YunB) J4048_RS11310 PF09346 SMI1 / KNR4 family (SUKH-1) J4048_RS11315 PF04740 LXG domain of WXG superfamily J4048_RS11315 PF15652 HNH/Endo VII superfamily toxin with a SHH signature J4048_RS11320 PF05901 Excalibur calcium-binding domain J4048_RS11320 PF00565 Staphylococcal nuclease homologue J4048_RS11335 PF00156 Phosphoribosyl transferase domain J4048_RS11340 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4048_RS11345 PF13307 Helicase C-terminal domain J4048_RS11355 PF14139 YpzG-like protein J4048_RS11360 PF02926 THUMP domain J4048_RS11360 PF01170 Putative RNA methylase family UPF0020 J4048_RS11370 PF05103 DivIVA protein J4048_RS11375 PF06908 YspA SLOG family J4048_RS11380 PF11122 Inner spore coat protein D J4048_RS11390 PF13482 RNase_H superfamily J4048_RS11395 PF00270 DEAD/DEAH box helicase J4048_RS11395 PF09369 Domain of unknown function (DUF1998) J4048_RS11395 PF00271 Helicase conserved C-terminal domain J4048_RS11400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4048_RS11410 PF14179 YppG-like protein J4048_RS11415 PF14178 YppF-like protein J4048_RS11420 PF08807 Bacterial domain of unknown function (DUF1798) J4048_RS11425 PF17522 Family of unknown function (DUF5446) J4048_RS11435 PF10720 Protein of unknown function (DUF2515) J4048_RS11440 PF03838 Recombination protein U J4048_RS11445 PF00912 Transglycosylase J4048_RS11445 PF00905 Penicillin binding protein transpeptidase domain J4048_RS11455 PF00730 HhH-GPD superfamily base excision DNA repair protein J4048_RS11455 PF10576 Iron-sulfur binding domain of endonuclease III J4048_RS11455 PF00633 Helix-hairpin-helix motif J4048_RS11460 PF07261 Replication initiation and membrane attachment J4048_RS11465 PF00152 tRNA synthetases class II (D, K and N) J4048_RS11465 PF01336 OB-fold nucleic acid binding domain J4048_RS11470 PF00155 Aminotransferase class I and II J4048_RS11475 PF17881 Domain of unknown function (DUF5590) J4048_RS11475 PF03413 Peptidase propeptide and YPEB domain J4048_RS11480 PF14084 Protein of unknown function (DUF4264) J4048_RS11485 PF13307 Helicase C-terminal domain J4048_RS11485 PF04851 Type III restriction enzyme, res subunit J4048_RS11485 PF00929 Exonuclease J4048_RS11490 PF02261 Aspartate decarboxylase J4048_RS11495 PF02569 Pantoate-beta-alanine ligase J4048_RS11500 PF02548 Ketopantoate hydroxymethyltransferase J4048_RS11505 PF08279 HTH domain J4048_RS11505 PF02237 Biotin protein ligase C terminal domain J4048_RS11505 PF03099 Biotin/lipoate A/B protein ligase family J4048_RS11510 PF01743 Poly A polymerase head domain J4048_RS11510 PF12627 Probable RNA and SrmB- binding site of polymerase A J4048_RS11510 PF13735 tRNA nucleotidyltransferase domain 2 putative J4048_RS11515 PF13439 Glycosyltransferase Family 4 J4048_RS11515 PF00534 Glycosyl transferases group 1 J4048_RS11520 PF02585 GlcNAc-PI de-N-acetylase J4048_RS11525 PF02142 MGS-like domain J4048_RS11530 PF05173 Dihydrodipicolinate reductase, C-terminus J4048_RS11530 PF01113 Dihydrodipicolinate reductase, N-terminus J4048_RS11535 PF03819 MazG nucleotide pyrophosphohydrolase domain J4048_RS11540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS11540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS11545 PF00190 Cupin J4048_RS11550 PF09577 Sporulation protein YpjB (SpoYpjB) J4048_RS11555 PF07187 Protein of unknown function (DUF1405) J4048_RS11560 PF00032 Cytochrome b(C-terminal)/b6/petD J4048_RS11560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4048_RS11565 PF00033 Cytochrome b/b6/petB J4048_RS11570 PF00355 Rieske [2Fe-2S] domain J4048_RS11575 PF10673 Protein of unknown function (DUF2487) J4048_RS11580 PF08864 UPF0302 domain J4048_RS11580 PF08858 IDEAL domain J4048_RS11590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4048_RS11595 PF02153 Prephenate dehydrogenase J4048_RS11595 PF01842 ACT domain J4048_RS11600 PF00155 Aminotransferase class I and II J4048_RS11605 PF00290 Tryptophan synthase alpha chain J4048_RS11610 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS11615 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4048_RS11620 PF00218 Indole-3-glycerol phosphate synthase J4048_RS11625 PF00591 Glycosyl transferase family, a/b domain J4048_RS11625 PF02885 Glycosyl transferase family, helical bundle domain J4048_RS11630 PF04715 Anthranilate synthase component I, N terminal region J4048_RS11630 PF00425 chorismate binding enzyme J4048_RS11635 PF07736 Chorismate mutase type I J4048_RS11640 PF01761 3-dehydroquinate synthase J4048_RS11645 PF01264 Chorismate synthase J4048_RS11650 PF01739 CheR methyltransferase, SAM binding domain J4048_RS11650 PF03705 CheR methyltransferase, all-alpha domain J4048_RS11655 PF00334 Nucleoside diphosphate kinase J4048_RS11660 PF00348 Polyprenyl synthetase J4048_RS11665 PF01209 ubiE/COQ5 methyltransferase family J4048_RS11670 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 J4048_RS11675 PF02081 Tryptophan RNA-binding attenuator protein J4048_RS11680 PF01227 GTP cyclohydrolase I J4048_RS11685 PF00216 Bacterial DNA-binding protein J4048_RS11690 PF09547 Stage IV sporulation protein A (spore_IV_A) J4048_RS11700 PF10966 Protein of unknown function (DUF2768) J4048_RS11705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4048_RS11705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4048_RS11710 PF01926 50S ribosome-binding GTPase J4048_RS11710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4048_RS11720 PF14140 YpzI-like protein J4048_RS11725 PF01070 FMN-dependent dehydrogenase J4048_RS11730 PF00575 S1 RNA binding domain J4048_RS11735 PF02224 Cytidylate kinase J4048_RS11740 PF17313 Family of unknown function (DUF5359) J4048_RS11745 PF12945 Flagellar protein YcgR J4048_RS11745 PF07238 PilZ domain J4048_RS11750 PF14620 YpeB sporulation J4048_RS11750 PF03413 Peptidase propeptide and YPEB domain J4048_RS11755 PF07486 Cell Wall Hydrolase J4048_RS11755 PF01471 Putative peptidoglycan binding domain J4048_RS11760 PF13367 PrsW family intramembrane metalloprotease J4048_RS11770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4048_RS11770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4048_RS11775 PF05389 Negative regulator of genetic competence (MecA) J4048_RS11780 PF00149 Calcineurin-like phosphoesterase J4048_RS11785 PF10864 Protein of unknown function (DUF2663) J4048_RS11790 PF01476 LysM domain J4048_RS11795 PF02517 CPBP intramembrane metalloprotease J4048_RS11800 PF00270 DEAD/DEAH box helicase J4048_RS11800 PF00271 Helicase conserved C-terminal domain J4048_RS11805 PF14493 Helix-turn-helix domain J4048_RS11815 PF12822 ECF transporter, substrate-specific component J4048_RS11820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4048_RS11820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4048_RS11820 PF01842 ACT domain J4048_RS11830 PF08281 Sigma-70, region 4 J4048_RS11830 PF04542 Sigma-70 region 2 J4048_RS11835 PF18698 Histidine kinase sensor domain J4048_RS11835 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS11835 PF00989 PAS fold J4048_RS11835 PF00672 HAMP domain J4048_RS11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS11840 PF00072 Response regulator receiver domain J4048_RS11840 PF00486 Transcriptional regulatory protein, C terminal J4048_RS11845 PF01578 Cytochrome C assembly protein J4048_RS11850 PF05140 ResB-like family J4048_RS11855 PF00578 AhpC/TSA family J4048_RS11860 PF00849 RNA pseudouridylate synthase J4048_RS11860 PF01479 S4 domain J4048_RS11865 PF07670 Nucleoside recognition J4048_RS11870 PF07670 Nucleoside recognition J4048_RS11875 PF00768 D-alanyl-D-alanine carboxypeptidase J4048_RS11875 PF07943 Penicillin-binding protein 5, C-terminal domain J4048_RS11880 PF13047 Protein of unknown function (DUF3907) J4048_RS11885 PF04079 Segregation and condensation complex subunit ScpB J4048_RS11890 PF02616 Segregation and condensation protein ScpA J4048_RS11900 PF03745 Domain of unknown function (DUF309) J4048_RS11905 PF00583 Acetyltransferase (GNAT) family J4048_RS11910 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4048_RS11915 PF00925 GTP cyclohydrolase II J4048_RS11915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4048_RS11920 PF00677 Lumazine binding domain J4048_RS11925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4048_RS11925 PF01872 RibD C-terminal domain J4048_RS11935 PF10502 Signal peptidase, peptidase S26 J4048_RS11945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4048_RS11950 PF06207 Protein of unknown function (DUF1002) J4048_RS11955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4048_RS11955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4048_RS11960 PF03323 Bacillus/Clostridium GerA spore germination protein J4048_RS11965 PF14097 Stage V sporulation protein AE1 J4048_RS11970 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J4048_RS11975 PF07451 Stage V sporulation protein AD (SpoVAD) J4048_RS11980 PF03862 SpoVAC/SpoVAEB sporulation membrane protein J4048_RS11985 PF13782 Stage V sporulation protein AB J4048_RS11990 PF12164 Stage V sporulation protein AA J4048_RS11995 PF04545 Sigma-70, region 4 J4048_RS11995 PF04542 Sigma-70 region 2 J4048_RS11995 PF04539 Sigma-70 region 3 J4048_RS12000 PF13581 Histidine kinase-like ATPase domain J4048_RS12005 PF01740 STAS domain J4048_RS12010 PF07943 Penicillin-binding protein 5, C-terminal domain J4048_RS12010 PF00768 D-alanyl-D-alanine carboxypeptidase J4048_RS12015 PF01048 Phosphorylase superfamily J4048_RS12020 PF01676 Metalloenzyme superfamily J4048_RS12025 PF00589 Phage integrase family J4048_RS12025 PF02899 Phage integrase, N-terminal SAM-like domain J4048_RS12030 PF14004 Protein of unknown function (DUF4227) J4048_RS12035 PF01475 Ferric uptake regulator family J4048_RS12040 PF01944 Stage II sporulation protein M J4048_RS12055 PF00390 Malic enzyme, N-terminal domain J4048_RS12055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4048_RS12055 PF03949 Malic enzyme, NAD binding domain J4048_RS12060 PF03553 Na+/H+ antiporter family J4048_RS12065 PF10415 Fumarase C C-terminus J4048_RS12065 PF00206 Lyase J4048_RS12070 PF00710 Asparaginase, N-terminal J4048_RS12070 PF17763 Glutaminase/Asparaginase C-terminal domain J4048_RS12075 PF01381 Helix-turn-helix J4048_RS12085 PF00293 NUDIX domain J4048_RS12090 PF13072 Mother cell inhibitor of FtsZ J4048_RS12095 PF00248 Aldo/keto reductase family J4048_RS12105 PF12146 Serine aminopeptidase, S33 J4048_RS12110 PF10827 Protein of unknown function (DUF2552) J4048_RS12115 PF01521 Iron-sulphur cluster biosynthesis J4048_RS12120 PF04229 GrpB protein J4048_RS12120 PF13673 Acetyltransferase (GNAT) domain J4048_RS12125 PF03992 Antibiotic biosynthesis monooxygenase J4048_RS12130 PF00583 Acetyltransferase (GNAT) family J4048_RS12135 PF11799 impB/mucB/samB family C-terminal domain J4048_RS12135 PF00817 impB/mucB/samB family J4048_RS12140 PF08863 YolD-like protein J4048_RS12145 PF14164 YqzH-like protein J4048_RS12150 PF01594 AI-2E family transporter J4048_RS12165 PF00485 Phosphoribulokinase / Uridine kinase family J4048_RS12170 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS12175 PF00106 short chain dehydrogenase J4048_RS12180 PF00753 Metallo-beta-lactamase superfamily J4048_RS12185 PF03807 NADP oxidoreductase coenzyme F420-dependent J4048_RS12185 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4048_RS12190 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS12195 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal J4048_RS12195 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal J4048_RS12200 PF00067 Cytochrome P450 J4048_RS12205 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12205 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12205 PF00550 Phosphopantetheine attachment site J4048_RS12205 PF14765 Polyketide synthase dehydratase J4048_RS12205 PF08659 KR domain J4048_RS12205 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12205 PF08242 Methyltransferase domain J4048_RS12210 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12210 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12210 PF08659 KR domain J4048_RS12210 PF08242 Methyltransferase domain J4048_RS12210 PF00550 Phosphopantetheine attachment site J4048_RS12210 PF14765 Polyketide synthase dehydratase J4048_RS12210 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12215 PF00550 Phosphopantetheine attachment site J4048_RS12215 PF08659 KR domain J4048_RS12215 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12215 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12215 PF00668 Condensation domain J4048_RS12215 PF13193 AMP-binding enzyme C-terminal domain J4048_RS12215 PF00501 AMP-binding enzyme J4048_RS12215 PF14765 Polyketide synthase dehydratase J4048_RS12215 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12220 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12220 PF00550 Phosphopantetheine attachment site J4048_RS12220 PF08659 KR domain J4048_RS12220 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12220 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12220 PF00668 Condensation domain J4048_RS12220 PF13193 AMP-binding enzyme C-terminal domain J4048_RS12220 PF00501 AMP-binding enzyme J4048_RS12220 PF14765 Polyketide synthase dehydratase J4048_RS12225 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12225 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12225 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12225 PF08659 KR domain J4048_RS12225 PF08242 Methyltransferase domain J4048_RS12225 PF00550 Phosphopantetheine attachment site J4048_RS12225 PF14765 Polyketide synthase dehydratase J4048_RS12230 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12230 PF00501 AMP-binding enzyme J4048_RS12230 PF13193 AMP-binding enzyme C-terminal domain J4048_RS12230 PF00668 Condensation domain J4048_RS12230 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12230 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12230 PF08659 KR domain J4048_RS12230 PF00550 Phosphopantetheine attachment site J4048_RS12230 PF14765 Polyketide synthase dehydratase J4048_RS12235 PF14765 Polyketide synthase dehydratase J4048_RS12235 PF00109 Beta-ketoacyl synthase, N-terminal domain J4048_RS12235 PF02801 Beta-ketoacyl synthase, C-terminal domain J4048_RS12235 PF00550 Phosphopantetheine attachment site J4048_RS12235 PF16197 Ketoacyl-synthetase C-terminal extension J4048_RS12235 PF08659 KR domain J4048_RS12235 PF08242 Methyltransferase domain J4048_RS12245 PF13193 AMP-binding enzyme C-terminal domain J4048_RS12245 PF00501 AMP-binding enzyme J4048_RS12260 PF00698 Acyl transferase domain J4048_RS12260 PF03060 Nitronate monooxygenase J4048_RS12265 PF00467 KOW motif J4048_RS12265 PF02357 Transcription termination factor nusG J4048_RS12280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4048_RS12285 PF12146 Serine aminopeptidase, S33 J4048_RS12290 PF00471 Ribosomal protein L33 J4048_RS12295 PF12706 Beta-lactamase superfamily domain J4048_RS12300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4048_RS12300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4048_RS12305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4048_RS12305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4048_RS12310 PF00817 impB/mucB/samB family J4048_RS12310 PF11799 impB/mucB/samB family C-terminal domain J4048_RS12310 PF11798 IMS family HHH motif J4048_RS12320 PF02096 60Kd inner membrane protein J4048_RS12325 PF07687 Peptidase dimerisation domain J4048_RS12325 PF01546 Peptidase family M20/M25/M40 J4048_RS12330 PF01039 Carboxyl transferase domain J4048_RS12345 PF03734 L,D-transpeptidase catalytic domain J4048_RS12350 PF06081 Aromatic acid exporter family member 1 J4048_RS12350 PF11728 Putative aromatic acid exporter C-terminal domain J4048_RS12355 PF00005 ABC transporter J4048_RS12360 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS12365 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS12370 PF06491 Disulphide isomerase J4048_RS12375 PF00781 Diacylglycerol kinase catalytic domain J4048_RS12380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4048_RS12380 PF00364 Biotin-requiring enzyme J4048_RS12380 PF02817 e3 binding domain J4048_RS12385 PF02779 Transketolase, pyrimidine binding domain J4048_RS12385 PF02780 Transketolase, C-terminal domain J4048_RS12390 PF00676 Dehydrogenase E1 component J4048_RS12395 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS12395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4048_RS12400 PF00871 Acetokinase family J4048_RS12405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4048_RS12405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4048_RS12410 PF01515 Phosphate acetyl/butaryl transferase J4048_RS12415 PF02954 Bacterial regulatory protein, Fis family J4048_RS12415 PF00158 Sigma-54 interaction domain J4048_RS12415 PF00989 PAS fold J4048_RS12420 PF11118 Protein of unknown function (DUF2627) J4048_RS12430 PF03972 MmgE/PrpD family J4048_RS12435 PF00285 Citrate synthase, C-terminal domain J4048_RS12440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4048_RS12440 PF02770 Acyl-CoA dehydrogenase, middle domain J4048_RS12440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4048_RS12445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4048_RS12445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4048_RS12450 PF02803 Thiolase, C-terminal domain J4048_RS12450 PF00108 Thiolase, N-terminal domain J4048_RS12455 PF03009 Glycerophosphoryl diester phosphodiesterase family J4048_RS12460 PF01520 N-acetylmuramoyl-L-alanine amidase J4048_RS12485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4048_RS12490 PF10676 Spore germination protein gerPA/gerPF J4048_RS12495 PF10676 Spore germination protein gerPA/gerPF J4048_RS12500 PF01168 Alanine racemase, N-terminal domain J4048_RS12500 PF00842 Alanine racemase, C-terminal domain J4048_RS12505 PF00072 Response regulator receiver domain J4048_RS12505 PF08769 Sporulation initiation factor Spo0A C terminal J4048_RS12510 PF17820 PDZ domain J4048_RS12510 PF05580 SpoIVB peptidase S55 J4048_RS12515 PF13476 AAA domain J4048_RS12520 PF01316 Arginine repressor, DNA binding domain J4048_RS12520 PF02863 Arginine repressor, C-terminal domain J4048_RS12525 PF01728 FtsJ-like methyltransferase J4048_RS12525 PF01479 S4 domain J4048_RS12530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4048_RS12530 PF02779 Transketolase, pyrimidine binding domain J4048_RS12530 PF02780 Transketolase, C-terminal domain J4048_RS12535 PF00348 Polyprenyl synthetase J4048_RS12540 PF02609 Exonuclease VII small subunit J4048_RS12545 PF02601 Exonuclease VII, large subunit J4048_RS12545 PF13742 OB-fold nucleic acid binding domain J4048_RS12550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4048_RS12550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4048_RS12555 PF01029 NusB family J4048_RS12560 PF03780 Asp23 family, cell envelope-related function J4048_RS12565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4048_RS12565 PF02785 Biotin carboxylase C-terminal domain J4048_RS12565 PF00289 Biotin carboxylase, N-terminal domain J4048_RS12570 PF00364 Biotin-requiring enzyme J4048_RS12575 PF12685 SpoIIIAH-like protein J4048_RS12585 PF09581 Stage III sporulation protein AF (Spore_III_AF) J4048_RS12590 PF09546 Stage III sporulation protein AE (spore_III_AE) J4048_RS12595 PF06686 Stage III sporulation protein AC/AD protein family J4048_RS12600 PF06686 Stage III sporulation protein AC/AD protein family J4048_RS12605 PF09548 Stage III sporulation protein AB (spore_III_AB) J4048_RS12615 PF10942 Protein of unknown function (DUF2619) J4048_RS12620 PF09285 Elongation factor P, C-terminal J4048_RS12620 PF08207 Elongation factor P (EF-P) KOW-like domain J4048_RS12620 PF01132 Elongation factor P (EF-P) OB domain J4048_RS12625 PF01321 Creatinase/Prolidase N-terminal domain J4048_RS12625 PF00557 Metallopeptidase family M24 J4048_RS12630 PF11085 Conserved membrane protein YqhR J4048_RS12635 PF07136 Protein of unknown function (DUF1385) J4048_RS12645 PF01734 Patatin-like phospholipase J4048_RS12650 PF02742 Iron dependent repressor, metal binding and dimerisation domain J4048_RS12650 PF01325 Iron dependent repressor, N-terminal DNA binding domain J4048_RS12655 PF03099 Biotin/lipoate A/B protein ligase family J4048_RS12660 PF00581 Rhodanese-like domain J4048_RS12665 PF02347 Glycine cleavage system P-protein J4048_RS12670 PF02347 Glycine cleavage system P-protein J4048_RS12675 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4048_RS12675 PF01571 Aminomethyltransferase folate-binding domain J4048_RS12680 PF00176 SNF2 family N-terminal domain J4048_RS12680 PF00271 Helicase conserved C-terminal domain J4048_RS12685 PF11079 Bacterial protein YqhG of unknown function J4048_RS12690 PF08671 Anti-repressor SinI J4048_RS12695 PF01381 Helix-turn-helix J4048_RS12695 PF08671 Anti-repressor SinI J4048_RS12700 PF12389 Camelysin metallo-endopeptidase J4048_RS12715 PF13028 Protein of unknown function (DUF3889) J4048_RS12720 PF14038 YqzE-like protein J4048_RS12725 PF14173 ComG operon protein 7 J4048_RS12730 PF15980 Putative Competence protein ComGF J4048_RS12740 PF07963 Prokaryotic N-terminal methylation motif J4048_RS12745 PF07963 Prokaryotic N-terminal methylation motif J4048_RS12750 PF00482 Type II secretion system (T2SS), protein F J4048_RS12755 PF00437 Type II/IV secretion system protein J4048_RS12760 PF01544 CorA-like Mg2+ transporter protein J4048_RS12765 PF00571 CBS domain J4048_RS12765 PF03471 Transporter associated domain J4048_RS12765 PF01595 Cyclin M transmembrane N-terminal domain J4048_RS12770 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain J4048_RS12770 PF01740 STAS domain J4048_RS12780 PF03960 ArsC family J4048_RS12785 PF11117 Protein of unknown function (DUF2626) J4048_RS12790 PF00753 Metallo-beta-lactamase superfamily J4048_RS12795 PF10958 Protein of unknown function (DUF2759) J4048_RS12800 PF01910 Thiamine-binding protein J4048_RS12810 PF00246 Zinc carboxypeptidase J4048_RS12815 PF00480 ROK family J4048_RS12820 PF06014 Bacterial protein of unknown function (DUF910) J4048_RS12825 PF03553 Na+/H+ antiporter family J4048_RS12835 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4048_RS12840 PF00471 Ribosomal protein L33 J4048_RS12855 PF00005 ABC transporter J4048_RS12860 PF00005 ABC transporter J4048_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS12875 PF12849 PBP superfamily domain J4048_RS12880 PF00905 Penicillin binding protein transpeptidase domain J4048_RS12880 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS12885 PF07690 Major Facilitator Superfamily J4048_RS12890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4048_RS12890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4048_RS12895 PF04306 Protein of unknown function (DUF456) J4048_RS12900 PF06691 Protein of unknown function (DUF1189) J4048_RS12910 PF04551 GcpE protein J4048_RS12925 PF01475 Ferric uptake regulator family J4048_RS12930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS12930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS12935 PF11116 Protein of unknown function (DUF2624) J4048_RS12940 PF01261 Xylose isomerase-like TIM barrel J4048_RS12945 PF00270 DEAD/DEAH box helicase J4048_RS12945 PF00271 Helicase conserved C-terminal domain J4048_RS12950 PF14181 YqfQ-like protein J4048_RS12955 PF02401 LytB protein J4048_RS12960 PF01784 NIF3 (NGG1p interacting factor 3) J4048_RS12965 PF04816 tRNA (adenine(22)-N(1))-methyltransferase J4048_RS12970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4048_RS12975 PF03979 Sigma-70 factor, region 1.1 J4048_RS12975 PF00140 Sigma-70 factor, region 1.2 J4048_RS12975 PF04542 Sigma-70 region 2 J4048_RS12975 PF04539 Sigma-70 region 3 J4048_RS12975 PF04545 Sigma-70, region 4 J4048_RS12980 PF10410 DnaB-helicase binding domain of primase J4048_RS12980 PF08275 DNA primase catalytic core, N-terminal domain J4048_RS12980 PF01807 CHC2 zinc finger J4048_RS12985 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4048_RS12990 PF03618 Kinase/pyrophosphorylase J4048_RS12995 PF00571 CBS domain J4048_RS12995 PF08279 HTH domain J4048_RS13000 PF02092 Glycyl-tRNA synthetase beta subunit J4048_RS13005 PF02091 Glycyl-tRNA synthetase alpha subunit J4048_RS13010 PF02565 Recombination protein O C terminal J4048_RS13010 PF11967 Recombination protein O N terminal J4048_RS13015 PF14006 YqzL-like protein J4048_RS13020 PF01926 50S ribosome-binding GTPase J4048_RS13020 PF07650 KH domain J4048_RS13025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4048_RS13030 PF01219 Prokaryotic diacylglycerol kinase J4048_RS13035 PF02130 Uncharacterized protein family UPF0054 J4048_RS13040 PF01966 HD domain J4048_RS13040 PF07698 7TM receptor with intracellular HD hydrolase J4048_RS13040 PF07697 7TM-HD extracellular J4048_RS13045 PF02562 PhoH-like protein J4048_RS13050 PF06898 Putative stage IV sporulation protein YqfD J4048_RS13055 PF07873 YabP family J4048_RS13065 PF12127 SigmaW regulon antibacterial J4048_RS13070 PF01957 NfeD-like C-terminal, partner-binding J4048_RS13070 PF01972 Serine dehydrogenase proteinase J4048_RS13075 PF09424 Yqey-like protein J4048_RS13080 PF01165 Ribosomal protein S21 J4048_RS13085 PF02690 Na+/Pi-cotransporter J4048_RS13090 PF00919 Uncharacterized protein family UPF0004 J4048_RS13090 PF01938 TRAM domain J4048_RS13090 PF04055 Radical SAM superfamily J4048_RS13095 PF04452 RNA methyltransferase J4048_RS13105 PF00226 DnaJ domain J4048_RS13105 PF01556 DnaJ C terminal domain J4048_RS13105 PF00684 DnaJ central domain J4048_RS13110 PF00012 Hsp70 protein J4048_RS13115 PF01025 GrpE J4048_RS13120 PF01628 HrcA protein C terminal domain J4048_RS13125 PF06969 HemN C-terminal domain J4048_RS13125 PF04055 Radical SAM superfamily J4048_RS13130 PF06421 GTP-binding protein LepA C-terminus J4048_RS13130 PF00009 Elongation factor Tu GTP binding domain J4048_RS13130 PF00679 Elongation factor G C-terminus J4048_RS13130 PF03144 Elongation factor Tu domain 2 J4048_RS13135 PF12438 Protein of unknown function (DUF3679) J4048_RS13140 PF07454 Stage II sporulation protein P (SpoIIP) J4048_RS13145 PF03418 Germination protease J4048_RS13150 PF01649 Ribosomal protein S20 J4048_RS13155 PF06144 DNA polymerase III, delta subunit J4048_RS13165 PF14141 YqzM-like protein J4048_RS13170 PF03772 Competence protein J4048_RS13170 PF13567 Domain of unknown function (DUF4131) J4048_RS13170 PF00753 Metallo-beta-lactamase superfamily J4048_RS13175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4048_RS13180 PF10531 SLBB domain J4048_RS13185 PF03807 NADP oxidoreductase coenzyme F420-dependent J4048_RS13185 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4048_RS13190 PF13649 Methyltransferase domain J4048_RS13200 PF01966 HD domain J4048_RS13205 PF01467 Cytidylyltransferase-like J4048_RS13210 PF01985 CRS1 / YhbY (CRM) domain J4048_RS13215 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4048_RS13215 PF01488 Shikimate / quinate 5-dehydrogenase J4048_RS13215 PF08501 Shikimate dehydrogenase substrate binding domain J4048_RS13220 PF01926 50S ribosome-binding GTPase J4048_RS13230 PF08970 Sporulation inhibitor A J4048_RS13235 PF00657 GDSL-like Lipase/Acylhydrolase J4048_RS13240 PF01522 Polysaccharide deacetylase J4048_RS13245 PF09335 SNARE associated Golgi protein J4048_RS13260 PF04542 Sigma-70 region 2 J4048_RS13260 PF04545 Sigma-70, region 4 J4048_RS13270 PF01177 Asp/Glu/Hydantoin racemase J4048_RS13275 PF10844 Protein of unknown function (DUF2577) J4048_RS13285 PF00248 Aldo/keto reductase family J4048_RS13315 PF06146 Phosphate-starvation-inducible E J4048_RS13320 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS13325 PF00072 Response regulator receiver domain J4048_RS13325 PF00486 Transcriptional regulatory protein, C terminal J4048_RS13330 PF04235 Protein of unknown function (DUF418) J4048_RS13340 PF00583 Acetyltransferase (GNAT) family J4048_RS13355 PF07690 Major Facilitator Superfamily J4048_RS13360 PF08050 Tetracycline resistance leader peptide J4048_RS13365 PF00583 Acetyltransferase (GNAT) family J4048_RS13370 PF05163 DinB family J4048_RS13390 PF01380 SIS domain J4048_RS13390 PF01418 Helix-turn-helix domain, rpiR family J4048_RS13395 PF01238 Phosphomannose isomerase type I J4048_RS13400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS13400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS13400 PF02378 Phosphotransferase system, EIIC J4048_RS13405 PF08279 HTH domain J4048_RS13405 PF05043 Mga helix-turn-helix domain J4048_RS13405 PF00874 PRD domain J4048_RS13405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS13410 PF12706 Beta-lactamase superfamily domain J4048_RS13415 PF04073 Aminoacyl-tRNA editing domain J4048_RS13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS13420 PF03466 LysR substrate binding domain J4048_RS13425 PF07690 Major Facilitator Superfamily J4048_RS13430 PF00667 FAD binding domain J4048_RS13430 PF00258 Flavodoxin J4048_RS13430 PF00175 Oxidoreductase NAD-binding domain J4048_RS13430 PF00067 Cytochrome P450 J4048_RS13435 PF16295 Tetracyclin repressor-like, C-terminal domain J4048_RS13435 PF00440 Bacterial regulatory proteins, tetR family J4048_RS13440 PF08241 Methyltransferase domain J4048_RS13450 PF09501 Probable sporulation protein (Bac_small_yrzI) J4048_RS13455 PF01226 Formate/nitrite transporter J4048_RS13460 PF10057 Uncharacterized conserved protein (DUF2294) J4048_RS13465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4048_RS13465 PF00384 Molybdopterin oxidoreductase J4048_RS13465 PF01568 Molydopterin dinucleotide binding domain J4048_RS13465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4048_RS13465 PF00037 4Fe-4S binding domain J4048_RS13470 PF07849 Protein of unknown function (DUF1641) J4048_RS13475 PF14143 YrhC-like protein J4048_RS13480 PF01053 Cys/Met metabolism PLP-dependent enzyme J4048_RS13485 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS13490 PF01048 Phosphorylase superfamily J4048_RS13495 PF13649 Methyltransferase domain J4048_RS13500 PF10750 Protein of unknown function (DUF2536) J4048_RS13505 PF07423 Domain of unknown function (DUF1510) J4048_RS13510 PF03717 Penicillin-binding Protein dimerisation domain J4048_RS13510 PF00905 Penicillin binding protein transpeptidase domain J4048_RS13515 PF01272 Transcription elongation factor, GreA/GreB, C-term J4048_RS13515 PF03449 Transcription elongation factor, N-terminal J4048_RS13520 PF00485 Phosphoribulokinase / Uridine kinase family J4048_RS13525 PF01136 Peptidase family U32 J4048_RS13525 PF16325 Peptidase family U32 C-terminal domain J4048_RS13530 PF01136 Peptidase family U32 J4048_RS13535 PF01596 O-methyltransferase J4048_RS13540 PF02618 YceG-like family J4048_RS13545 PF06949 Protein of unknown function (DUF1292) J4048_RS13550 PF03652 Holliday junction resolvase J4048_RS13555 PF06135 IreB regulatory phosphoprotein J4048_RS13560 PF02272 DHHA1 domain J4048_RS13560 PF01411 tRNA synthetases class II (A) J4048_RS13560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4048_RS13565 PF01594 AI-2E family transporter J4048_RS13570 PF00005 ABC transporter J4048_RS13575 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS13585 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS13590 PF13056 Protein of unknown function (DUF3918) J4048_RS13600 PF05239 PRC-barrel domain J4048_RS13605 PF14490 Helix-hairpin-helix containing domain J4048_RS13605 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J4048_RS13605 PF13538 UvrD-like helicase C-terminal domain J4048_RS13610 PF07719 Tetratricopeptide repeat J4048_RS13610 PF13181 Tetratricopeptide repeat J4048_RS13620 PF00266 Aminotransferase class-V J4048_RS13625 PF02082 Transcriptional regulator J4048_RS13630 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4048_RS13630 PF12002 MgsA AAA+ ATPase C terminal J4048_RS13630 PF16193 AAA C-terminal domain J4048_RS13635 PF00899 ThiF family J4048_RS13645 PF02938 GAD domain J4048_RS13645 PF00152 tRNA synthetases class II (D, K and N) J4048_RS13645 PF01336 OB-fold nucleic acid binding domain J4048_RS13650 PF03129 Anticodon binding domain J4048_RS13650 PF13393 Histidyl-tRNA synthetase J4048_RS13655 PF17449 Uncharacterized YrzK-like J4048_RS13660 PF08239 Bacterial SH3 domain J4048_RS13660 PF01520 N-acetylmuramoyl-L-alanine amidase J4048_RS13665 PF02580 D-Tyr-tRNA(Tyr) deacylase J4048_RS13670 PF13291 ACT domain J4048_RS13670 PF04607 Region found in RelA / SpoT proteins J4048_RS13670 PF02824 TGS domain J4048_RS13675 PF00156 Phosphoribosyl transferase domain J4048_RS13680 PF01368 DHH family J4048_RS13680 PF02272 DHHA1 domain J4048_RS13680 PF17768 RecJ OB domain J4048_RS13680 PF10141 Single-strand DNA-specific exonuclease, C terminal domain J4048_RS13685 PF06305 Lipopolysaccharide assembly protein A domain J4048_RS13690 PF02080 TrkA-C domain J4048_RS13695 PF02355 Protein export membrane protein J4048_RS13695 PF07549 SecD/SecF GG Motif J4048_RS13700 PF13797 Post-transcriptional regulator J4048_RS13705 PF01943 Polysaccharide biosynthesis protein J4048_RS13705 PF14667 Polysaccharide biosynthesis C-terminal domain J4048_RS13710 PF04239 Protein of unknown function (DUF421) J4048_RS13715 PF12670 Protein of unknown function (DUF3792) J4048_RS13720 PF02699 Preprotein translocase subunit J4048_RS13725 PF01702 Queuine tRNA-ribosyltransferase J4048_RS13730 PF02547 Queuosine biosynthesis protein J4048_RS13735 PF11146 Protein of unknown function (DUF2905) J4048_RS13740 PF17864 RuvB AAA lid domain J4048_RS13740 PF05491 RuvB C-terminal winged helix domain J4048_RS13740 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4048_RS13745 PF07499 RuvA, C-terminal domain J4048_RS13745 PF01330 RuvA N terminal domain J4048_RS13750 PF08955 BofC C-terminal domain J4048_RS13750 PF08977 Bypass of Forespore C, N terminal J4048_RS13760 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) J4048_RS13765 PF01476 LysM domain J4048_RS13770 PF02445 Quinolinate synthetase A protein J4048_RS13775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4048_RS13775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4048_RS13780 PF00890 FAD binding domain J4048_RS13780 PF02910 Fumarate reductase flavoprotein C-term J4048_RS13785 PF00266 Aminotransferase class-V J4048_RS13790 PF02829 3H domain J4048_RS13790 PF08279 HTH domain J4048_RS13795 PF00800 Prephenate dehydratase J4048_RS13795 PF01842 ACT domain J4048_RS13800 PF01842 ACT domain J4048_RS13805 PF09269 Domain of unknown function (DUF1967) J4048_RS13805 PF01018 GTP1/OBG J4048_RS13805 PF01926 50S ribosome-binding GTPase J4048_RS13810 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4048_RS13810 PF14682 Sporulation initiation phospho-transferase B, C-terminal J4048_RS13815 PF01016 Ribosomal L27 protein J4048_RS13820 PF04327 Cysteine protease Prp J4048_RS13825 PF00829 Ribosomal prokaryotic L21 protein J4048_RS13830 PF02163 Peptidase family M50 J4048_RS13835 PF01551 Peptidase family M23 J4048_RS13840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4048_RS13845 PF03775 Septum formation inhibitor MinC, C-terminal domain J4048_RS13850 PF04093 rod shape-determining protein MreD J4048_RS13855 PF04085 rod shape-determining protein MreC J4048_RS13865 PF04002 RadC-like JAB domain J4048_RS13870 PF02545 Maf-like protein J4048_RS13875 PF05036 Sporulation related domain J4048_RS13880 PF06750 Bacterial Peptidase A24 N-terminal domain J4048_RS13880 PF01478 Type IV leader peptidase family J4048_RS13885 PF02875 Mur ligase family, glutamate ligase domain J4048_RS13885 PF08245 Mur ligase middle domain J4048_RS13890 PF08264 Anticodon-binding domain of tRNA J4048_RS13890 PF00133 tRNA synthetases class I (I, L, M and V) J4048_RS13890 PF10458 Valyl tRNA synthetase tRNA binding arm J4048_RS13905 PF01476 LysM domain J4048_RS13910 PF00202 Aminotransferase class-III J4048_RS13915 PF00490 Delta-aminolevulinic acid dehydratase J4048_RS13920 PF02602 Uroporphyrinogen-III synthase HemD J4048_RS13925 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4048_RS13925 PF03900 Porphobilinogen deaminase, C-terminal domain J4048_RS13930 PF01578 Cytochrome C assembly protein J4048_RS13935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4048_RS13935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4048_RS13935 PF01488 Shikimate / quinate 5-dehydrogenase J4048_RS13945 PF01926 50S ribosome-binding GTPase J4048_RS13950 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS13950 PF05362 Lon protease (S16) C-terminal proteolytic domain J4048_RS13950 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4048_RS13955 PF00004 ATPase family associated with various cellular activities (AAA) J4048_RS13955 PF05362 Lon protease (S16) C-terminal proteolytic domain J4048_RS13960 PF10431 C-terminal, D2-small domain, of ClpB protein J4048_RS13960 PF06689 ClpX C4-type zinc finger J4048_RS13960 PF07724 AAA domain (Cdc48 subfamily) J4048_RS13965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4048_RS13965 PF05697 Bacterial trigger factor protein (TF) J4048_RS13965 PF05698 Bacterial trigger factor protein (TF) C-terminus J4048_RS13975 PF00694 Aconitase C-terminal domain J4048_RS13980 PF00330 Aconitase family (aconitate hydratase) J4048_RS13985 PF00180 Isocitrate/isopropylmalate dehydrogenase J4048_RS13990 PF00682 HMGL-like J4048_RS13990 PF08502 LeuA allosteric (dimerisation) domain J4048_RS13995 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4048_RS13995 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4048_RS14000 PF01842 ACT domain J4048_RS14000 PF10369 Small subunit of acetolactate synthase J4048_RS14005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4048_RS14005 PF00205 Thiamine pyrophosphate enzyme, central domain J4048_RS14005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4048_RS14025 PF01420 Type I restriction modification DNA specificity domain J4048_RS14030 PF02384 N-6 DNA Methylase J4048_RS14035 PF08463 EcoEI R protein C-terminal J4048_RS14035 PF00271 Helicase conserved C-terminal domain J4048_RS14035 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4048_RS14035 PF04851 Type III restriction enzyme, res subunit J4048_RS14055 PF12850 Calcineurin-like phosphoesterase superfamily domain J4048_RS14060 PF01725 Ham1 family J4048_RS14065 PF03725 3' exoribonuclease family, domain 2 J4048_RS14065 PF01138 3' exoribonuclease family, domain 1 J4048_RS14070 PF10646 Sporulation and spore germination J4048_RS14075 PF01177 Asp/Glu/Hydantoin racemase J4048_RS14080 PF01047 MarR family J4048_RS14085 PF00196 Bacterial regulatory proteins, luxR family J4048_RS14090 PF03061 Thioesterase superfamily J4048_RS14095 PF13085 2Fe-2S iron-sulfur cluster binding domain J4048_RS14095 PF13183 4Fe-4S dicluster domain J4048_RS14100 PF00890 FAD binding domain J4048_RS14100 PF02910 Fumarate reductase flavoprotein C-term J4048_RS14105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4048_RS14110 PF10702 Protein of unknown function (DUF2507) J4048_RS14115 PF00696 Amino acid kinase family J4048_RS14115 PF13840 ACT domain J4048_RS14115 PF01842 ACT domain J4048_RS14120 PF01541 GIY-YIG catalytic domain J4048_RS14120 PF08459 UvrC Helix-hairpin-helix N-terminal J4048_RS14120 PF02151 UvrB/uvrC motif J4048_RS14125 PF00085 Thioredoxin J4048_RS14130 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J4048_RS14135 PF01012 Electron transfer flavoprotein domain J4048_RS14135 PF00766 Electron transfer flavoprotein FAD-binding domain J4048_RS14140 PF01012 Electron transfer flavoprotein domain J4048_RS14145 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS14150 PF08359 YsiA-like protein, C-terminal region J4048_RS14150 PF00440 Bacterial regulatory proteins, tetR family J4048_RS14155 PF00501 AMP-binding enzyme J4048_RS14155 PF13193 AMP-binding enzyme C-terminal domain J4048_RS14165 PF03994 Domain of Unknown Function (DUF350) J4048_RS14170 PF00488 MutS domain V J4048_RS14170 PF01713 Smr domain J4048_RS14175 PF02811 PHP domain J4048_RS14175 PF14716 Helix-hairpin-helix domain J4048_RS14175 PF14791 DNA polymerase beta thumb J4048_RS14180 PF02674 Colicin V production protein J4048_RS14185 PF05164 Cell division protein ZapA J4048_RS14190 PF11858 Domain of unknown function (DUF3378) J4048_RS14190 PF01351 Ribonuclease HII J4048_RS14195 PF03483 B3/4 domain J4048_RS14195 PF03484 tRNA synthetase B5 domain J4048_RS14195 PF03147 Ferredoxin-fold anticodon binding domain J4048_RS14195 PF01588 Putative tRNA binding domain J4048_RS14195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4048_RS14200 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4048_RS14200 PF01409 tRNA synthetases class II core domain (F) J4048_RS14205 PF00588 SpoU rRNA Methylase family J4048_RS14205 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4048_RS14210 PF14098 Small, acid-soluble spore protein I J4048_RS14215 PF05651 Putative sugar diacid recognition J4048_RS14215 PF13556 PucR C-terminal helix-turn-helix domain J4048_RS14215 PF17853 GGDEF-like domain J4048_RS14220 PF01565 FAD binding domain J4048_RS14220 PF02913 FAD linked oxidases, C-terminal domain J4048_RS14225 PF02754 Cysteine-rich domain J4048_RS14225 PF13183 4Fe-4S dicluster domain J4048_RS14230 PF02554 Carbon starvation protein CstA J4048_RS14230 PF13722 5TM C-terminal transporter carbon starvation CstA J4048_RS14235 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J4048_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS14250 PF01547 Bacterial extracellular solute-binding protein J4048_RS14255 PF13685 Iron-containing alcohol dehydrogenase J4048_RS14260 PF13344 Haloacid dehalogenase-like hydrolase J4048_RS14265 PF00596 Class II Aldolase and Adducin N-terminal domain J4048_RS14270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4048_RS14270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4048_RS14275 PF11762 L-arabinose isomerase C-terminal domain J4048_RS14275 PF02610 L-arabinose isomerase J4048_RS14280 PF04616 Glycosyl hydrolases family 43 J4048_RS14285 PF05343 M42 glutamyl aminopeptidase J4048_RS14295 PF06961 Protein of unknown function (DUF1294) J4048_RS14300 PF00453 Ribosomal protein L20 J4048_RS14305 PF01632 Ribosomal protein L35 J4048_RS14310 PF05198 Translation initiation factor IF-3, N-terminal domain J4048_RS14310 PF00707 Translation initiation factor IF-3, C-terminal domain J4048_RS14315 PF04172 LrgB-like family J4048_RS14320 PF03788 LrgA family J4048_RS14325 PF04397 LytTr DNA-binding domain J4048_RS14325 PF00072 Response regulator receiver domain J4048_RS14330 PF07694 5TMR of 5TMR-LYT J4048_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS14330 PF06580 Histidine kinase J4048_RS14335 PF13419 Haloacid dehalogenase-like hydrolase J4048_RS14340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4048_RS14340 PF03129 Anticodon binding domain J4048_RS14340 PF02824 TGS domain J4048_RS14340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4048_RS14345 PF08812 YtxC-like family J4048_RS14350 PF09335 SNARE associated Golgi protein J4048_RS14355 PF07319 Primosomal protein DnaI N-terminus J4048_RS14355 PF01695 IstB-like ATP binding protein J4048_RS14360 PF07261 Replication initiation and membrane attachment J4048_RS14365 PF03477 ATP cone domain J4048_RS14370 PF02675 S-adenosylmethionine decarboxylase J4048_RS14375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4048_RS14375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4048_RS14380 PF01638 HxlR-like helix-turn-helix J4048_RS14385 PF07690 Major Facilitator Superfamily J4048_RS14390 PF00248 Aldo/keto reductase family J4048_RS14395 PF01121 Dephospho-CoA kinase J4048_RS14400 PF02659 Putative manganese efflux pump J4048_RS14405 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4048_RS14405 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4048_RS14405 PF06827 Zinc finger found in FPG and IleRS J4048_RS14410 PF01367 5'-3' exonuclease, C-terminal SAM fold J4048_RS14410 PF00476 DNA polymerase family A J4048_RS14410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4048_RS14415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS14415 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS14415 PF00989 PAS fold J4048_RS14415 PF16736 Single Cache-like J4048_RS14420 PF00486 Transcriptional regulatory protein, C terminal J4048_RS14420 PF00072 Response regulator receiver domain J4048_RS14425 PF00056 lactate/malate dehydrogenase, NAD binding domain J4048_RS14425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4048_RS14430 PF00180 Isocitrate/isopropylmalate dehydrogenase J4048_RS14435 PF00285 Citrate synthase, C-terminal domain J4048_RS14445 PF11208 Protein of unknown function (DUF2992) J4048_RS14455 PF04284 Protein of unknown function (DUF441) J4048_RS14460 PF01594 AI-2E family transporter J4048_RS14465 PF04186 FxsA cytoplasmic membrane protein J4048_RS14470 PF00224 Pyruvate kinase, barrel domain J4048_RS14470 PF02887 Pyruvate kinase, alpha/beta domain J4048_RS14470 PF00391 PEP-utilising enzyme, mobile domain J4048_RS14475 PF00365 Phosphofructokinase J4048_RS14480 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4048_RS14485 PF01039 Carboxyl transferase domain J4048_RS14485 PF17848 Acetyl-coA carboxylase zinc finger domain J4048_RS14490 PF00390 Malic enzyme, N-terminal domain J4048_RS14490 PF03949 Malic enzyme, NAD binding domain J4048_RS14495 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4048_RS14495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4048_RS14495 PF14579 Helix-hairpin-helix motif J4048_RS14495 PF02811 PHP domain J4048_RS14495 PF01336 OB-fold nucleic acid binding domain J4048_RS14500 PF14034 Sporulation protein YtrH J4048_RS14515 PF02272 DHHA1 domain J4048_RS14515 PF01368 DHH family J4048_RS14520 PF14007 YtpI-like protein J4048_RS14525 PF03061 Thioesterase superfamily J4048_RS14525 PF00571 CBS domain J4048_RS14525 PF07085 DRTGG domain J4048_RS14525 PF00392 Bacterial regulatory proteins, gntR family J4048_RS14540 PF14698 Argininosuccinate lyase C-terminal J4048_RS14540 PF00206 Lyase J4048_RS14545 PF00764 Arginosuccinate synthase J4048_RS14550 PF00994 Probable molybdopterin binding domain J4048_RS14555 PF00871 Acetokinase family J4048_RS14560 PF02384 N-6 DNA Methylase J4048_RS14565 PF08534 Redoxin J4048_RS14570 PF09579 Sporulation protein YtfJ (Spore_YtfJ) J4048_RS14575 PF11167 Protein of unknown function (DUF2953) J4048_RS14580 PF06271 RDD family J4048_RS14585 PF01343 Peptidase family S49 J4048_RS14590 PF01513 ATP-NAD kinase J4048_RS14595 PF07969 Amidohydrolase family J4048_RS14600 PF00501 AMP-binding enzyme J4048_RS14600 PF13193 AMP-binding enzyme C-terminal domain J4048_RS14605 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4048_RS14610 PF02568 Thiamine biosynthesis protein (ThiI) J4048_RS14610 PF02926 THUMP domain J4048_RS14615 PF00266 Aminotransferase class-V J4048_RS14620 PF05525 Branched-chain amino acid transport protein J4048_RS14625 PF06160 Septation ring formation regulator, EzrA J4048_RS14630 PF02811 PHP domain J4048_RS14635 PF00440 Bacterial regulatory proteins, tetR family J4048_RS14640 PF13185 GAF domain J4048_RS14645 PF00990 Diguanylate cyclase, GGDEF domain J4048_RS14650 PF00163 Ribosomal protein S4/S9 N-terminal domain J4048_RS14650 PF01479 S4 domain J4048_RS14655 PF00171 Aldehyde dehydrogenase family J4048_RS14660 PF09346 SMI1 / KNR4 family (SUKH-1) J4048_RS14665 PF00175 Oxidoreductase NAD-binding domain J4048_RS14665 PF00042 Globin J4048_RS14665 PF00970 Oxidoreductase FAD-binding domain J4048_RS14675 PF01965 DJ-1/PfpI family J4048_RS14690 PF01545 Cation efflux family J4048_RS14690 PF16916 Dimerisation domain of Zinc Transporter J4048_RS14695 PF11495 Archaeal transcriptional regulator TrmB J4048_RS14695 PF01978 Sugar-specific transcriptional regulator TrmB J4048_RS14710 PF01479 S4 domain J4048_RS14710 PF00579 tRNA synthetases class I (W and Y) J4048_RS14715 PF00501 AMP-binding enzyme J4048_RS14715 PF13193 AMP-binding enzyme C-terminal domain J4048_RS14720 PF00583 Acetyltransferase (GNAT) family J4048_RS14725 PF00571 CBS domain J4048_RS14730 PF00850 Histone deacetylase domain J4048_RS14735 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4048_RS14735 PF00691 OmpA family J4048_RS14740 PF01618 MotA/TolQ/ExbB proton channel family J4048_RS14745 PF00356 Bacterial regulatory proteins, lacI family J4048_RS14750 PF01817 Chorismate mutase type II J4048_RS14750 PF00793 DAHP synthetase I family J4048_RS14755 PF11009 Protein of unknown function (DUF2847) J4048_RS14760 PF12732 YtxH-like protein J4048_RS14765 PF06103 Bacterial protein of unknown function (DUF948) J4048_RS14770 PF01225 Mur ligase family, catalytic domain J4048_RS14770 PF02875 Mur ligase family, glutamate ligase domain J4048_RS14770 PF08245 Mur ligase middle domain J4048_RS14775 PF17854 FtsK alpha domain J4048_RS14775 PF09397 Ftsk gamma domain J4048_RS14775 PF01580 FtsK/SpoIIIE family J4048_RS14780 PF14794 Domain of unknown function (DUF4479) J4048_RS14780 PF01588 Putative tRNA binding domain J4048_RS14785 PF07285 Protein of unknown function (DUF1444) J4048_RS14790 PF00085 Thioredoxin J4048_RS14795 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ J4048_RS14800 PF05343 M42 glutamyl aminopeptidase J4048_RS14805 PF03413 Peptidase propeptide and YPEB domain J4048_RS14810 PF00390 Malic enzyme, N-terminal domain J4048_RS14810 PF03949 Malic enzyme, NAD binding domain J4048_RS14815 PF00753 Metallo-beta-lactamase superfamily J4048_RS14820 PF02390 Putative methyltransferase J4048_RS14825 PF14165 YtzH-like protein J4048_RS14830 PF01636 Phosphotransferase enzyme family J4048_RS14835 PF00781 Diacylglycerol kinase catalytic domain J4048_RS14850 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS14855 PF01546 Peptidase family M20/M25/M40 J4048_RS14860 PF00860 Permease family J4048_RS14865 PF05975 Bacterial ABC transporter protein EcsB J4048_RS14870 PF00005 ABC transporter J4048_RS14875 PF08220 DeoR-like helix-turn-helix domain J4048_RS14880 PF00849 RNA pseudouridylate synthase J4048_RS14880 PF01479 S4 domain J4048_RS14885 PF01943 Polysaccharide biosynthesis protein J4048_RS14885 PF14667 Polysaccharide biosynthesis C-terminal domain J4048_RS14895 PF02028 BCCT, betaine/carnitine/choline family transporter J4048_RS14900 PF10957 Sporulation protein Cse60 J4048_RS14905 PF00356 Bacterial regulatory proteins, lacI family J4048_RS14910 PF01547 Bacterial extracellular solute-binding protein J4048_RS14915 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS14925 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4048_RS14925 PF02056 Family 4 glycosyl hydrolase J4048_RS14935 PF00581 Rhodanese-like domain J4048_RS14940 PF08264 Anticodon-binding domain of tRNA J4048_RS14940 PF00133 tRNA synthetases class I (I, L, M and V) J4048_RS14940 PF13603 Leucyl-tRNA synthetase, Domain 2 J4048_RS14940 PF09334 tRNA synthetases class I (M) J4048_RS14945 PF14074 Protein of unknown function (DUF4257) J4048_RS14950 PF13426 PAS domain J4048_RS14950 PF01740 STAS domain J4048_RS14955 PF07690 Major Facilitator Superfamily J4048_RS14960 PF09529 Integral membrane protein (intg_mem_TP0381) J4048_RS14970 PF02687 FtsX-like permease family J4048_RS14975 PF00005 ABC transporter J4048_RS14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS14985 PF00486 Transcriptional regulatory protein, C terminal J4048_RS14985 PF00072 Response regulator receiver domain J4048_RS14990 PF02687 FtsX-like permease family J4048_RS14990 PF12704 MacB-like periplasmic core domain J4048_RS14995 PF00005 ABC transporter J4048_RS15015 PF00005 ABC transporter J4048_RS15020 PF00392 Bacterial regulatory proteins, gntR family J4048_RS15025 PF10732 Protein of unknown function (DUF2524) J4048_RS15030 PF04055 Radical SAM superfamily J4048_RS15030 PF16199 Radical_SAM C-terminal domain J4048_RS15035 PF06962 Putative rRNA methylase J4048_RS15045 PF03009 Glycerophosphoryl diester phosphodiesterase family J4048_RS15050 PF10776 Protein of unknown function (DUF2600) J4048_RS15055 PF12146 Serine aminopeptidase, S33 J4048_RS15060 PF00132 Bacterial transferase hexapeptide (six repeats) J4048_RS15065 PF00324 Amino acid permease J4048_RS15070 PF13537 Glutamine amidotransferase domain J4048_RS15070 PF00733 Asparagine synthase J4048_RS15075 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4048_RS15075 PF02772 S-adenosylmethionine synthetase, central domain J4048_RS15075 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4048_RS15080 PF01293 Phosphoenolpyruvate carboxykinase J4048_RS15085 PF10763 Protein of unknown function (DUF2584) J4048_RS15090 PF00326 Prolyl oligopeptidase family J4048_RS15100 PF00005 ABC transporter J4048_RS15105 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS15110 PF00293 NUDIX domain J4048_RS15115 PF05105 Bacteriophage holin family J4048_RS15120 PF00210 Ferritin-like domain J4048_RS15130 PF13115 YtkA-like J4048_RS15135 PF02664 S-Ribosylhomocysteinase (LuxS) J4048_RS15140 PF01809 Putative membrane protein insertion efficiency factor J4048_RS15145 PF00484 Carbonic anhydrase J4048_RS15150 PF01197 Ribosomal protein L31 J4048_RS15155 PF01654 Cytochrome bd terminal oxidase subunit I J4048_RS15160 PF02322 Cytochrome bd terminal oxidase subunit II J4048_RS15165 PF07561 Domain of Unknown Function (DUF1540) J4048_RS15170 PF13378 Enolase C-terminal domain-like J4048_RS15170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4048_RS15175 PF13193 AMP-binding enzyme C-terminal domain J4048_RS15175 PF00501 AMP-binding enzyme J4048_RS15180 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS15185 PF00561 alpha/beta hydrolase fold J4048_RS15190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4048_RS15190 PF16582 Middle domain of thiamine pyrophosphate J4048_RS15190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4048_RS15195 PF00425 chorismate binding enzyme J4048_RS15200 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4048_RS15205 PF03073 TspO/MBR family J4048_RS15330 PF09515 Thiamine transporter protein (Thia_YuaJ) J4048_RS15335 PF01145 SPFH domain / Band 7 family J4048_RS15335 PF15975 Flotillin J4048_RS15345 PF12867 DinB superfamily J4048_RS15355 PF00465 Iron-containing alcohol dehydrogenase J4048_RS15360 PF00171 Aldehyde dehydrogenase family J4048_RS15370 PF17735 Biofilm surface layer A J4048_RS15375 PF02254 TrkA-N domain J4048_RS15375 PF02080 TrkA-C domain J4048_RS15380 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4048_RS15380 PF13457 GW (Gly-Tryp) dipeptide domain J4048_RS15385 PF00042 Globin J4048_RS15385 PF00970 Oxidoreductase FAD-binding domain J4048_RS15385 PF00175 Oxidoreductase NAD-binding domain J4048_RS15405 PF02673 Bacitracin resistance protein BacA J4048_RS15410 PF01594 AI-2E family transporter J4048_RS15415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4048_RS15415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4048_RS15420 PF01965 DJ-1/PfpI family J4048_RS15425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS15425 PF02743 Cache domain J4048_RS15425 PF00672 HAMP domain J4048_RS15430 PF02743 Cache domain J4048_RS15430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS15430 PF00672 HAMP domain J4048_RS15435 PF02743 Cache domain J4048_RS15435 PF00672 HAMP domain J4048_RS15435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS15440 PF02743 Cache domain J4048_RS15440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4048_RS15440 PF00672 HAMP domain J4048_RS15455 PF03060 Nitronate monooxygenase J4048_RS15460 PF01894 Uncharacterised protein family UPF0047 J4048_RS15465 PF00128 Alpha amylase, catalytic domain J4048_RS15465 PF16657 Maltogenic Amylase, C-terminal domain J4048_RS15470 PF00571 CBS domain J4048_RS15470 PF03471 Transporter associated domain J4048_RS15470 PF01595 Cyclin M transmembrane N-terminal domain J4048_RS15475 PF04298 Putative neutral zinc metallopeptidase J4048_RS15485 PF11458 Membrane-integrating protein Mistic J4048_RS15490 PF07885 Ion channel J4048_RS15490 PF02254 TrkA-N domain J4048_RS15495 PF08868 YugN-like family J4048_RS15505 PF00342 Phosphoglucose isomerase J4048_RS15510 PF03358 NADPH-dependent FMN reductase J4048_RS15515 PF00857 Isochorismatase family J4048_RS15520 PF00465 Iron-containing alcohol dehydrogenase J4048_RS15525 PF00465 Iron-containing alcohol dehydrogenase J4048_RS15530 PF04070 Domain of unknown function (DUF378) J4048_RS15535 PF00575 S1 RNA binding domain J4048_RS15540 PF00155 Aminotransferase class I and II J4048_RS15545 PF01037 Lrp/AsnC ligand binding domain J4048_RS15550 PF08386 TAP-like protein J4048_RS15550 PF00561 alpha/beta hydrolase fold J4048_RS15555 PF08958 Domain of unknown function (DUF1871) J4048_RS15560 PF00155 Aminotransferase class I and II J4048_RS15565 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS15570 PF08810 Kinase associated protein B J4048_RS15575 PF00929 Exonuclease J4048_RS15580 PF07690 Major Facilitator Superfamily J4048_RS15585 PF00912 Transglycosylase J4048_RS15585 PF00905 Penicillin binding protein transpeptidase domain J4048_RS15590 PF04134 Protein of unknown function, DUF393 J4048_RS15595 PF17328 Family of unknown function (DUF5366) J4048_RS15600 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4048_RS15600 PF00989 PAS fold J4048_RS15600 PF17203 Single cache domain 3 J4048_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS15605 PF00072 Response regulator receiver domain J4048_RS15610 PF02608 ABC transporter substrate-binding protein PnrA-like J4048_RS15615 PF00005 ABC transporter J4048_RS15620 PF02653 Branched-chain amino acid transport system / permease component J4048_RS15625 PF02653 Branched-chain amino acid transport system / permease component J4048_RS15635 PF13244 Domain of unknown function (DUF4040) J4048_RS15635 PF00361 Proton-conducting membrane transporter J4048_RS15635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4048_RS15640 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4048_RS15645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4048_RS15650 PF00361 Proton-conducting membrane transporter J4048_RS15655 PF01899 Na+/H+ ion antiporter subunit J4048_RS15660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4048_RS15665 PF03334 Na+/H+ antiporter subunit J4048_RS15670 PF03061 Thioesterase superfamily J4048_RS15675 PF00072 Response regulator receiver domain J4048_RS15675 PF00196 Bacterial regulatory proteins, luxR family J4048_RS15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS15680 PF07730 Histidine kinase J4048_RS15685 PF05952 Bacillus competence pheromone ComX J4048_RS15690 PF00348 Polyprenyl synthetase J4048_RS15695 PF08181 DegQ (SacQ) family J4048_RS15705 PF00563 EAL domain J4048_RS15705 PF08668 HDOD domain J4048_RS15710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4048_RS15710 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain J4048_RS15710 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4048_RS15715 PF00857 Isochorismatase family J4048_RS15720 PF07997 Protein of unknown function (DUF1694) J4048_RS15725 PF14166 YueH-like protein J4048_RS15730 PF10676 Spore germination protein gerPA/gerPF J4048_RS15735 PF01594 AI-2E family transporter J4048_RS15740 PF10842 Protein of unknown function (DUF2642) J4048_RS15745 PF01966 HD domain J4048_RS15750 PF00106 short chain dehydrogenase J4048_RS15755 PF17355 Family of unknown function (DUF5383) J4048_RS15765 PF01580 FtsK/SpoIIIE family J4048_RS15765 PF12538 DNA transporter J4048_RS15770 PF10140 WXG100 protein secretion system (Wss), protein YukC J4048_RS15775 PF08817 WXG100 protein secretion system (Wss), protein YukD J4048_RS15780 PF06013 Proteins of 100 residues with WXG J4048_RS15785 PF06018 CodY GAF-like domain J4048_RS15785 PF17853 GGDEF-like domain J4048_RS15785 PF13556 PucR C-terminal helix-turn-helix domain J4048_RS15790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4048_RS15790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4048_RS15795 PF10042 Uncharacterized conserved protein (DUF2278) J4048_RS15800 PF03621 MbtH-like protein J4048_RS15805 PF00501 AMP-binding enzyme J4048_RS15805 PF13193 AMP-binding enzyme C-terminal domain J4048_RS15805 PF00668 Condensation domain J4048_RS15805 PF00550 Phosphopantetheine attachment site J4048_RS15805 PF00975 Thioesterase domain J4048_RS15810 PF00857 Isochorismatase family J4048_RS15810 PF00550 Phosphopantetheine attachment site J4048_RS15815 PF00501 AMP-binding enzyme J4048_RS15815 PF13193 AMP-binding enzyme C-terminal domain J4048_RS15820 PF00425 chorismate binding enzyme J4048_RS15825 PF00106 short chain dehydrogenase J4048_RS15830 PF00756 Putative esterase J4048_RS15835 PF00174 Oxidoreductase molybdopterin binding domain J4048_RS15840 PF02632 BioY family J4048_RS15845 PF13726 Na+-H+ antiporter family J4048_RS15845 PF03553 Na+/H+ antiporter family J4048_RS15850 PF00883 Cytosol aminopeptidase family, catalytic domain J4048_RS15850 PF02789 Cytosol aminopeptidase family, N-terminal domain J4048_RS15855 PF02681 Divergent PAP2 family J4048_RS15860 PF06725 3D domain J4048_RS15865 PF14068 Putative membrane protein J4048_RS15870 PF17302 Family of unknown function (DUF5351) J4048_RS15875 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS15880 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS15890 PF00478 IMP dehydrogenase / GMP reductase domain J4048_RS15905 PF00005 ABC transporter J4048_RS15915 PF09221 Bacteriocin class IId cyclical uberolysin-like J4048_RS15925 PF13302 Acetyltransferase (GNAT) domain J4048_RS15930 PF00106 short chain dehydrogenase J4048_RS15945 PF01521 Iron-sulphur cluster biosynthesis J4048_RS15950 PF01678 Diaminopimelate epimerase J4048_RS15955 PF01773 Na+ dependent nucleoside transporter N-terminus J4048_RS15955 PF07662 Na+ dependent nucleoside transporter C-terminus J4048_RS15960 PF07293 Protein of unknown function (DUF1450) J4048_RS15965 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS15970 PF07315 Protein of unknown function (DUF1462) J4048_RS15975 PF01106 NifU-like domain J4048_RS15980 PF07676 WD40-like Beta Propeller Repeat J4048_RS15980 PF00326 Prolyl oligopeptidase family J4048_RS15985 PF08544 GHMP kinases C terminal J4048_RS15985 PF00288 GHMP kinases N terminal domain J4048_RS15990 PF00291 Pyridoxal-phosphate dependent enzyme J4048_RS15995 PF00742 Homoserine dehydrogenase J4048_RS15995 PF03447 Homoserine dehydrogenase, NAD binding domain J4048_RS15995 PF01842 ACT domain J4048_RS16005 PF04608 Phosphatidylglycerophosphatase A J4048_RS16010 PF13344 Haloacid dehalogenase-like hydrolase J4048_RS16015 PF01934 Protein of unknown function DUF86 J4048_RS16020 PF06265 Protein of unknown function (DUF1027) J4048_RS16025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4048_RS16025 PF04055 Radical SAM superfamily J4048_RS16030 PF01551 Peptidase family M23 J4048_RS16035 PF09560 Sporulation protein YunB (Spo_YunB) J4048_RS16040 PF02872 5'-nucleotidase, C-terminal domain J4048_RS16045 PF01925 Sulfite exporter TauE/SafE J4048_RS16050 PF01904 Protein of unknown function DUF72 J4048_RS16060 PF01979 Amidohydrolase family J4048_RS16065 PF17853 GGDEF-like domain J4048_RS16065 PF13556 PucR C-terminal helix-turn-helix domain J4048_RS16065 PF07905 Purine catabolism regulatory protein-like family J4048_RS16080 PF07690 Major Facilitator Superfamily J4048_RS16085 PF00266 Aminotransferase class-V J4048_RS16090 PF01546 Peptidase family M20/M25/M40 J4048_RS16095 PF04231 Endonuclease I J4048_RS16100 PF17912 MalK OB fold domain J4048_RS16100 PF00005 ABC transporter J4048_RS16100 PF03459 TOBE domain J4048_RS16105 PF00392 Bacterial regulatory proteins, gntR family J4048_RS16105 PF07702 UTRA domain J4048_RS16110 PF00294 pfkB family carbohydrate kinase J4048_RS16115 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16125 PF01547 Bacterial extracellular solute-binding protein J4048_RS16130 PF01380 SIS domain J4048_RS16135 PF13411 MerR HTH family regulatory protein J4048_RS16150 PF17418 Sporulation delaying protein SdpA J4048_RS16155 PF07853 Protein of unknown function (DUF1648) J4048_RS16160 PF01541 GIY-YIG catalytic domain J4048_RS16165 PF01266 FAD dependent oxidoreductase J4048_RS16170 PF01209 ubiE/COQ5 methyltransferase family J4048_RS16175 PF10903 Protein of unknown function (DUF2691) J4048_RS16180 PF01374 Glycosyl hydrolase family 46 J4048_RS16190 PF01458 Uncharacterized protein family (UPF0051) J4048_RS16195 PF01592 NifU-like N terminal domain J4048_RS16200 PF00266 Aminotransferase class-V J4048_RS16205 PF01458 Uncharacterized protein family (UPF0051) J4048_RS16210 PF00005 ABC transporter J4048_RS16220 PF02627 Carboxymuconolactone decarboxylase family J4048_RS16225 PF03180 NLPA lipoprotein J4048_RS16230 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16235 PF00005 ABC transporter J4048_RS16235 PF09383 NIL domain J4048_RS16240 PF02036 SCP-2 sterol transfer family J4048_RS16245 PF00085 Thioredoxin J4048_RS16250 PF01751 Toprim domain J4048_RS16255 PF10830 Protein of unknown function (DUF2553) J4048_RS16260 PF01597 Glycine cleavage H-protein J4048_RS16265 PF03960 ArsC family J4048_RS16270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4048_RS16270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4048_RS16270 PF02770 Acyl-CoA dehydrogenase, middle domain J4048_RS16275 PF02803 Thiolase, C-terminal domain J4048_RS16275 PF00108 Thiolase, N-terminal domain J4048_RS16280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4048_RS16280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4048_RS16280 PF00378 Enoyl-CoA hydratase/isomerase J4048_RS16285 PF14115 YuzL-like protein J4048_RS16290 PF01619 Proline dehydrogenase J4048_RS16295 PF07690 Major Facilitator Superfamily J4048_RS16305 PF07875 Coat F domain J4048_RS16310 PF01047 MarR family J4048_RS16315 PF07690 Major Facilitator Superfamily J4048_RS16320 PF03466 LysR substrate binding domain J4048_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS16325 PF06314 Acetoacetate decarboxylase (ADC) J4048_RS16335 PF10835 Protein of unknown function (DUF2573) J4048_RS16340 PF00005 ABC transporter J4048_RS16345 PF14039 YusW-like protein J4048_RS16355 PF00106 short chain dehydrogenase J4048_RS16360 PF00210 Ferritin-like domain J4048_RS16365 PF13180 PDZ domain J4048_RS16370 PF00486 Transcriptional regulatory protein, C terminal J4048_RS16370 PF00072 Response regulator receiver domain J4048_RS16375 PF00672 HAMP domain J4048_RS16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS16375 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS16385 PF00440 Bacterial regulatory proteins, tetR family J4048_RS16390 PF10415 Fumarase C C-terminus J4048_RS16390 PF00206 Lyase J4048_RS16395 PF13113 Protein of unknown function (DUF3970) J4048_RS16400 PF03323 Bacillus/Clostridium GerA spore germination protein J4048_RS16405 PF03845 Spore germination protein J4048_RS16410 PF05504 Spore germination B3/ GerAC like, C-terminal J4048_RS16415 PF00196 Bacterial regulatory proteins, luxR family J4048_RS16415 PF00072 Response regulator receiver domain J4048_RS16420 PF00672 HAMP domain J4048_RS16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS16420 PF07730 Histidine kinase J4048_RS16425 PF09922 Cell wall-active antibiotics response 4TMS YvqF J4048_RS16430 PF13349 Putative adhesin J4048_RS16435 PF04012 PspA/IM30 family J4048_RS16445 PF07690 Major Facilitator Superfamily J4048_RS16450 PF01923 Cobalamin adenosyltransferase J4048_RS16455 PF00005 ABC transporter J4048_RS16460 PF01032 FecCD transport family J4048_RS16465 PF01497 Periplasmic binding protein J4048_RS16470 PF00106 short chain dehydrogenase J4048_RS16475 PF08450 SMP-30/Gluconolactonase/LRE-like region J4048_RS16480 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS16485 PF00486 Transcriptional regulatory protein, C terminal J4048_RS16485 PF00072 Response regulator receiver domain J4048_RS16495 PF04545 Sigma-70, region 4 J4048_RS16500 PF12841 YvrJ protein family J4048_RS16505 PF00190 Cupin J4048_RS16510 PF14184 Regulatory protein YrvL J4048_RS16515 PF00005 ABC transporter J4048_RS16520 PF01032 FecCD transport family J4048_RS16525 PF01032 FecCD transport family J4048_RS16530 PF01497 Periplasmic binding protein J4048_RS16535 PF04072 Leucine carboxyl methyltransferase J4048_RS16540 PF13520 Amino acid permease J4048_RS16545 PF09575 Small spore protein J (Spore_SspJ) J4048_RS16550 PF04307 LexA-binding, inner membrane-associated putative hydrolase J4048_RS16555 PF00884 Sulfatase J4048_RS16560 PF12728 Helix-turn-helix domain J4048_RS16560 PF12727 PBP superfamily domain J4048_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16575 PF00196 Bacterial regulatory proteins, luxR family J4048_RS16575 PF00072 Response regulator receiver domain J4048_RS16580 PF00672 HAMP domain J4048_RS16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS16580 PF07730 Histidine kinase J4048_RS16580 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4048_RS16585 PF00005 ABC transporter J4048_RS16600 PF00248 Aldo/keto reductase family J4048_RS16610 PF00999 Sodium/hydrogen exchanger family J4048_RS16615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4048_RS16615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4048_RS16620 PF00667 FAD binding domain J4048_RS16620 PF00258 Flavodoxin J4048_RS16620 PF00175 Oxidoreductase NAD-binding domain J4048_RS16625 PF13538 UvrD-like helicase C-terminal domain J4048_RS16630 PF03458 UPF0126 domain J4048_RS16640 PF02600 Disulfide bond formation protein DsbB J4048_RS16645 PF13462 Thioredoxin J4048_RS16650 PF00403 Heavy-metal-associated domain J4048_RS16655 PF00403 Heavy-metal-associated domain J4048_RS16660 PF00403 Heavy-metal-associated domain J4048_RS16665 PF02583 Metal-sensitive transcriptional repressor J4048_RS16670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4048_RS16670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4048_RS16675 PF02525 Flavodoxin-like fold J4048_RS16685 PF07690 Major Facilitator Superfamily J4048_RS16700 PF00296 Luciferase-like monooxygenase J4048_RS16705 PF00462 Glutaredoxin J4048_RS16710 PF00296 Luciferase-like monooxygenase J4048_RS16715 PF00005 ABC transporter J4048_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16730 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS16735 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4048_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS16745 PF03466 LysR substrate binding domain J4048_RS16750 PF00106 short chain dehydrogenase J4048_RS16755 PF01337 Barstar (barnase inhibitor) J4048_RS16760 PF01337 Barstar (barnase inhibitor) J4048_RS16770 PF01668 SmpB protein J4048_RS16775 PF17876 Cold shock domain J4048_RS16775 PF08206 Ribonuclease B OB domain J4048_RS16775 PF00773 RNB domain J4048_RS16775 PF00575 S1 RNA binding domain J4048_RS16780 PF12146 Serine aminopeptidase, S33 J4048_RS16785 PF03840 Preprotein translocase SecG subunit J4048_RS16790 PF01381 Helix-turn-helix J4048_RS16805 PF01638 HxlR-like helix-turn-helix J4048_RS16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS16810 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS16815 PF00072 Response regulator receiver domain J4048_RS16815 PF00486 Transcriptional regulatory protein, C terminal J4048_RS16830 PF00005 ABC transporter J4048_RS16835 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16840 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4048_RS16845 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16850 PF00005 ABC transporter J4048_RS16850 PF00571 CBS domain J4048_RS16855 PF12802 MarR family J4048_RS16860 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4048_RS16870 PF00528 Binding-protein-dependent transport system inner membrane component J4048_RS16875 PF00571 CBS domain J4048_RS16875 PF00005 ABC transporter J4048_RS16880 PF12802 MarR family J4048_RS16885 PF01914 MarC family integral membrane protein J4048_RS16895 PF13240 zinc-ribbon domain J4048_RS16900 PF00583 Acetyltransferase (GNAT) family J4048_RS16915 PF02585 GlcNAc-PI de-N-acetylase J4048_RS16930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4048_RS16935 PF01370 NAD dependent epimerase/dehydratase family J4048_RS16940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4048_RS16945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4048_RS16945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4048_RS16945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4048_RS16950 PF02225 PA domain J4048_RS16950 PF04389 Peptidase family M28 J4048_RS16955 PF00113 Enolase, C-terminal TIM barrel domain J4048_RS16955 PF03952 Enolase, N-terminal domain J4048_RS16960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4048_RS16960 PF01676 Metalloenzyme superfamily J4048_RS16965 PF00121 Triosephosphate isomerase J4048_RS16970 PF00162 Phosphoglycerate kinase J4048_RS16975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4048_RS16975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4048_RS16980 PF04198 Putative sugar-binding domain J4048_RS16985 PF00083 Sugar (and other) transporter J4048_RS16990 PF00392 Bacterial regulatory proteins, gntR family J4048_RS17000 PF00296 Luciferase-like monooxygenase J4048_RS17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS17005 PF03466 LysR substrate binding domain J4048_RS17010 PF00892 EamA-like transporter family J4048_RS17015 PF00324 Amino acid permease J4048_RS17025 PF00356 Bacterial regulatory proteins, lacI family J4048_RS17040 PF01418 Helix-turn-helix domain, rpiR family J4048_RS17040 PF01380 SIS domain J4048_RS17045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4048_RS17045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4048_RS17050 PF02447 GntP family permease J4048_RS17055 PF02589 LUD domain J4048_RS17060 PF13183 4Fe-4S dicluster domain J4048_RS17060 PF02589 LUD domain J4048_RS17060 PF11870 Domain of unknown function (DUF3390) J4048_RS17065 PF02754 Cysteine-rich domain J4048_RS17070 PF00155 Aminotransferase class I and II J4048_RS17075 PF07729 FCD domain J4048_RS17075 PF00392 Bacterial regulatory proteins, gntR family J4048_RS17080 PF02652 L-lactate permease J4048_RS17085 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4048_RS17085 PF04963 Sigma-54 factor, core binding domain J4048_RS17085 PF04552 Sigma-54, DNA binding domain J4048_RS17090 PF09628 YvfG protein J4048_RS17095 PF04230 Polysaccharide pyruvyl transferase J4048_RS17100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4048_RS17105 PF00132 Bacterial transferase hexapeptide (six repeats) J4048_RS17105 PF17836 PglD N-terminal domain J4048_RS17110 PF02397 Bacterial sugar transferase J4048_RS17115 PF01943 Polysaccharide biosynthesis protein J4048_RS17115 PF14667 Polysaccharide biosynthesis C-terminal domain J4048_RS17120 PF00535 Glycosyl transferase family 2 J4048_RS17125 PF04230 Polysaccharide pyruvyl transferase J4048_RS17130 PF00535 Glycosyl transferase family 2 J4048_RS17140 PF13439 Glycosyltransferase Family 4 J4048_RS17140 PF00534 Glycosyl transferases group 1 J4048_RS17145 PF00535 Glycosyl transferase family 2 J4048_RS17150 PF13439 Glycosyltransferase Family 4 J4048_RS17150 PF00534 Glycosyl transferases group 1 J4048_RS17155 PF02719 Polysaccharide biosynthesis protein J4048_RS17160 PF13614 AAA domain J4048_RS17165 PF02706 Chain length determinant protein J4048_RS17170 PF01381 Helix-turn-helix J4048_RS17170 PF08671 Anti-repressor SinI J4048_RS17175 PF00135 Carboxylesterase family J4048_RS17180 PF01872 RibD C-terminal domain J4048_RS17190 PF00583 Acetyltransferase (GNAT) family J4048_RS17195 PF05870 Phenolic acid decarboxylase (PAD) J4048_RS17250 PF08244 Glycosyl hydrolases family 32 C terminal J4048_RS17250 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4048_RS17255 PF01306 LacY proton/sugar symporter J4048_RS17260 PF00356 Bacterial regulatory proteins, lacI family J4048_RS17265 PF00574 Clp protease J4048_RS17270 PF03466 LysR substrate binding domain J4048_RS17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS17275 PF04303 PrpF protein J4048_RS17280 PF00083 Sugar (and other) transporter J4048_RS17285 PF03641 Possible lysine decarboxylase J4048_RS17290 PF03819 MazG nucleotide pyrophosphohydrolase domain J4048_RS17295 PF01740 STAS domain J4048_RS17295 PF00916 Sulfate permease family J4048_RS17300 PF00484 Carbonic anhydrase J4048_RS17305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4048_RS17305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4048_RS17310 PF00545 ribonuclease J4048_RS17315 PF00797 N-acetyltransferase J4048_RS17320 PF00381 PTS HPr component phosphorylation site J4048_RS17325 PF10298 WhiA N-terminal LAGLIDADG-like domain J4048_RS17325 PF14527 WhiA LAGLIDADG-like domain J4048_RS17325 PF02650 WhiA C-terminal HTH domain J4048_RS17330 PF01933 Uncharacterised protein family UPF0052 J4048_RS17335 PF03668 P-loop ATPase protein family J4048_RS17340 PF00293 NUDIX domain J4048_RS17345 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS17350 PF00877 NlpC/P60 family J4048_RS17360 PF00989 PAS fold J4048_RS17360 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS17360 PF18698 Histidine kinase sensor domain J4048_RS17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS17360 PF00672 HAMP domain J4048_RS17365 PF00486 Transcriptional regulatory protein, C terminal J4048_RS17365 PF00072 Response regulator receiver domain J4048_RS17375 PF00664 ABC transporter transmembrane region J4048_RS17375 PF00005 ABC transporter J4048_RS17380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4048_RS17380 PF01502 Phosphoribosyl-AMP cyclohydrolase J4048_RS17385 PF00977 Histidine biosynthesis protein J4048_RS17390 PF00977 Histidine biosynthesis protein J4048_RS17395 PF00117 Glutamine amidotransferase class-I J4048_RS17400 PF00475 Imidazoleglycerol-phosphate dehydratase J4048_RS17405 PF00815 Histidinol dehydrogenase J4048_RS17410 PF01634 ATP phosphoribosyltransferase J4048_RS17415 PF13393 Histidyl-tRNA synthetase J4048_RS17420 PF13529 Peptidase_C39 like family J4048_RS17425 PF14602 Hexapeptide repeat of succinyl-transferase J4048_RS17430 PF13419 Haloacid dehalogenase-like hydrolase J4048_RS17435 PF01790 Prolipoprotein diacylglyceryl transferase J4048_RS17440 PF02603 HPr Serine kinase N terminus J4048_RS17440 PF07475 HPr Serine kinase C-terminal domain J4048_RS17445 PF01979 Amidohydrolase family J4048_RS17450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4048_RS17455 PF00392 Bacterial regulatory proteins, gntR family J4048_RS17455 PF07702 UTRA domain J4048_RS17460 PF00440 Bacterial regulatory proteins, tetR family J4048_RS17465 PF00149 Calcineurin-like phosphoesterase J4048_RS17470 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV J4048_RS17475 PF04024 PspC domain J4048_RS17480 PF13349 Putative adhesin J4048_RS17495 PF17760 UvrA interaction domain J4048_RS17495 PF00005 ABC transporter J4048_RS17495 PF17755 UvrA DNA-binding domain J4048_RS17500 PF00271 Helicase conserved C-terminal domain J4048_RS17500 PF04851 Type III restriction enzyme, res subunit J4048_RS17500 PF02151 UvrB/uvrC motif J4048_RS17500 PF12344 Ultra-violet resistance protein B J4048_RS17500 PF17757 UvrB interaction domain J4048_RS17505 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) J4048_RS17510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4048_RS17510 PF00391 PEP-utilising enzyme, mobile domain J4048_RS17515 PF00440 Bacterial regulatory proteins, tetR family J4048_RS17520 PF07690 Major Facilitator Superfamily J4048_RS17525 PF00975 Thioesterase domain J4048_RS17540 PF00664 ABC transporter transmembrane region J4048_RS17540 PF00005 ABC transporter J4048_RS17545 PF13193 AMP-binding enzyme C-terminal domain J4048_RS17545 PF00668 Condensation domain J4048_RS17545 PF00550 Phosphopantetheine attachment site J4048_RS17545 PF00975 Thioesterase domain J4048_RS17545 PF00501 AMP-binding enzyme J4048_RS17550 PF00501 AMP-binding enzyme J4048_RS17550 PF13193 AMP-binding enzyme C-terminal domain J4048_RS17550 PF00668 Condensation domain J4048_RS17550 PF00550 Phosphopantetheine attachment site J4048_RS17570 PF17820 PDZ domain J4048_RS17575 PF17423 Swarming motility protein J4048_RS17580 PF01471 Putative peptidoglycan binding domain J4048_RS17580 PF17820 PDZ domain J4048_RS17580 PF03572 Peptidase family S41 J4048_RS17585 PF13229 Right handed beta helix region J4048_RS17590 PF02687 FtsX-like permease family J4048_RS17590 PF18075 FtsX extracellular domain J4048_RS17595 PF00005 ABC transporter J4048_RS17600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4048_RS17605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS17605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS17615 PF02810 SEC-C motif J4048_RS17615 PF07516 SecA Wing and Scaffold domain J4048_RS17615 PF07517 SecA DEAD-like domain J4048_RS17615 PF01043 SecA preprotein cross-linking domain J4048_RS17620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4048_RS17620 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J4048_RS17635 PF02561 Flagellar protein FliS J4048_RS17640 PF07196 Flagellin hook IN motif J4048_RS17640 PF07195 Flagellar hook-associated protein 2 C-terminus J4048_RS17640 PF02465 Flagellar hook-associated protein 2 N-terminus J4048_RS17645 PF00669 Bacterial flagellin N-terminal helical region J4048_RS17645 PF00700 Bacterial flagellin C-terminal helical region J4048_RS17650 PF02599 Global regulator protein family J4048_RS17655 PF02623 FliW protein J4048_RS17665 PF00700 Bacterial flagellin C-terminal helical region J4048_RS17665 PF00669 Bacterial flagellin N-terminal helical region J4048_RS17670 PF00460 Flagella basal body rod protein J4048_RS17670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4048_RS17675 PF05130 FlgN protein J4048_RS17680 PF04316 Anti-sigma-28 factor, FlgM J4048_RS17695 PF10719 Late competence development protein ComFB J4048_RS17700 PF00271 Helicase conserved C-terminal domain J4048_RS17700 PF04851 Type III restriction enzyme, res subunit J4048_RS17705 PF02645 Uncharacterised protein, DegV family COG1307 J4048_RS17710 PF00196 Bacterial regulatory proteins, luxR family J4048_RS17710 PF00072 Response regulator receiver domain J4048_RS17715 PF05384 Sensor protein DegS J4048_RS17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS17715 PF07730 Histidine kinase J4048_RS17720 PF09186 Domain of unknown function (DUF1949) J4048_RS17720 PF01205 Uncharacterized protein family UPF0029 J4048_RS17725 PF03816 Cell envelope-related transcriptional attenuator domain J4048_RS17730 PF00953 Glycosyl transferase family 4 J4048_RS17740 PF00535 Glycosyl transferase family 2 J4048_RS17745 PF02706 Chain length determinant protein J4048_RS17750 PF04932 O-Antigen ligase J4048_RS17755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4048_RS17755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4048_RS17755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4048_RS17760 PF13439 Glycosyltransferase Family 4 J4048_RS17760 PF00534 Glycosyl transferases group 1 J4048_RS17765 PF01943 Polysaccharide biosynthesis protein J4048_RS17765 PF14667 Polysaccharide biosynthesis C-terminal domain J4048_RS17770 PF02397 Bacterial sugar transferase J4048_RS17775 PF01520 N-acetylmuramoyl-L-alanine amidase J4048_RS17775 PF04122 Putative cell wall binding repeat 2 J4048_RS17780 PF04122 Putative cell wall binding repeat 2 J4048_RS17780 PF08486 Stage II sporulation protein J4048_RS17790 PF03816 Cell envelope-related transcriptional attenuator domain J4048_RS17795 PF02350 UDP-N-acetylglucosamine 2-epimerase J4048_RS17800 PF00483 Nucleotidyl transferase J4048_RS17805 PF00005 ABC transporter J4048_RS17810 PF01061 ABC-2 type transporter J4048_RS17815 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4048_RS17820 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 J4048_RS17820 PF00535 Glycosyl transferase family 2 J4048_RS17825 PF01467 Cytidylyltransferase-like J4048_RS17830 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4048_RS17835 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4048_RS17840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4048_RS17840 PF08239 Bacterial SH3 domain J4048_RS17840 PF05036 Sporulation related domain J4048_RS17845 PF01238 Phosphomannose isomerase type I J4048_RS17850 PF03323 Bacillus/Clostridium GerA spore germination protein J4048_RS17855 PF03845 Spore germination protein J4048_RS17860 PF05504 Spore germination B3/ GerAC like, C-terminal J4048_RS17870 PF00083 Sugar (and other) transporter J4048_RS17875 PF03816 Cell envelope-related transcriptional attenuator domain J4048_RS17885 PF04791 LMBR1-like membrane protein J4048_RS17890 PF00877 NlpC/P60 family J4048_RS17900 PF09587 Bacterial capsule synthesis protein PGA_cap J4048_RS17905 PF14102 Capsule biosynthesis CapC J4048_RS17910 PF08245 Mur ligase middle domain J4048_RS17915 PF03323 Bacillus/Clostridium GerA spore germination protein J4048_RS17920 PF03845 Spore germination protein J4048_RS17930 PF00356 Bacterial regulatory proteins, lacI family J4048_RS17935 PF00294 pfkB family carbohydrate kinase J4048_RS17940 PF05025 RbsD / FucU transport protein family J4048_RS17945 PF00005 ABC transporter J4048_RS17950 PF02653 Branched-chain amino acid transport system / permease component J4048_RS17955 PF13407 Periplasmic binding protein domain J4048_RS17960 PF08239 Bacterial SH3 domain J4048_RS17965 PF02525 Flavodoxin-like fold J4048_RS17970 PF03306 Alpha-acetolactate decarboxylase J4048_RS17975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4048_RS17975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4048_RS17975 PF00205 Thiamine pyrophosphate enzyme, central domain J4048_RS17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS17980 PF03466 LysR substrate binding domain J4048_RS17985 PF02040 Arsenical pump membrane protein J4048_RS18000 PF08757 CotH kinase protein J4048_RS18010 PF01613 Flavin reductase like domain J4048_RS18025 PF01037 Lrp/AsnC ligand binding domain J4048_RS18025 PF13404 AsnC-type helix-turn-helix domain J4048_RS18030 PF02417 Chromate transporter J4048_RS18035 PF02417 Chromate transporter J4048_RS18040 PF04493 Endonuclease V J4048_RS18090 PF14431 YwqJ-like deaminase J4048_RS18090 PF14449 Pre-toxin TG J4048_RS18090 PF04740 LXG domain of WXG superfamily J4048_RS18100 PF16888 Domain of unknown function (DUF5082) J4048_RS18105 PF09234 Domain of unknown function (DUF1963) J4048_RS18110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4048_RS18110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4048_RS18110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4048_RS18120 PF13614 AAA domain J4048_RS18125 PF02706 Chain length determinant protein J4048_RS18125 PF13807 G-rich domain on putative tyrosine kinase J4048_RS18135 PF04434 SWIM zinc finger J4048_RS18140 PF12419 SNF2 Helicase protein J4048_RS18140 PF00271 Helicase conserved C-terminal domain J4048_RS18140 PF00176 SNF2 family N-terminal domain J4048_RS18150 PF00455 DeoR C terminal sensor domain J4048_RS18150 PF08220 DeoR-like helix-turn-helix domain J4048_RS18155 PF00436 Single-strand binding protein family J4048_RS18165 PF14183 YwpF-like protein J4048_RS18170 PF01741 Large-conductance mechanosensitive channel, MscL J4048_RS18175 PF07977 FabA-like domain J4048_RS18180 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS18185 PF00460 Flagella basal body rod protein J4048_RS18185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4048_RS18190 PF00460 Flagella basal body rod protein J4048_RS18190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4048_RS18200 PF12116 Stage III sporulation protein D J4048_RS18205 PF01047 MarR family J4048_RS18210 PF07690 Major Facilitator Superfamily J4048_RS18215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4048_RS18220 PF07690 Major Facilitator Superfamily J4048_RS18225 PF00857 Isochorismatase family J4048_RS18230 PF00909 Ammonium Transporter Family J4048_RS18235 PF00543 Nitrogen regulatory protein P-II J4048_RS18240 PF01098 Cell cycle protein J4048_RS18245 PF01569 PAP2 superfamily J4048_RS18250 PF04892 VanZ like family J4048_RS18255 PF01551 Peptidase family M23 J4048_RS18260 PF00583 Acetyltransferase (GNAT) family J4048_RS18265 PF17319 Family of unknown function (DUF5362) J4048_RS18270 PF17370 Family of unknown function (DUF5392) J4048_RS18275 PF13091 PLD-like domain J4048_RS18275 PF13396 Phospholipase_D-nuclease N-terminal J4048_RS18280 PF17319 Family of unknown function (DUF5362) J4048_RS18285 PF00457 Glycosyl hydrolases family 11 J4048_RS18290 PF02082 Transcriptional regulator J4048_RS18295 PF01979 Amidohydrolase family J4048_RS18295 PF00449 Urease alpha-subunit, N-terminal domain J4048_RS18300 PF00699 Urease beta subunit J4048_RS18305 PF00547 Urease, gamma subunit J4048_RS18320 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS18320 PF17874 MalT-like TPR region J4048_RS18325 PF06463 Molybdenum Cofactor Synthesis C J4048_RS18325 PF04055 Radical SAM superfamily J4048_RS18330 PF02634 FdhD/NarQ family J4048_RS18340 PF00092 von Willebrand factor type A domain J4048_RS18345 PF00092 von Willebrand factor type A domain J4048_RS18350 PF08486 Stage II sporulation protein J4048_RS18355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4048_RS18360 PF08680 TATA-box binding J4048_RS18365 PF06612 Protein of unknown function (DUF1146) J4048_RS18375 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4048_RS18375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4048_RS18380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4048_RS18380 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4048_RS18385 PF00231 ATP synthase J4048_RS18390 PF00306 ATP synthase alpha/beta chain, C terminal domain J4048_RS18390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4048_RS18390 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4048_RS18395 PF00213 ATP synthase delta (OSCP) subunit J4048_RS18400 PF00430 ATP synthase B/B' CF(0) J4048_RS18405 PF00137 ATP synthase subunit C J4048_RS18410 PF00119 ATP synthase A chain J4048_RS18415 PF03899 ATP synthase I chain J4048_RS18425 PF00464 Serine hydroxymethyltransferase J4048_RS18430 PF04260 Protein of unknown function (DUF436) J4048_RS18435 PF02502 Ribose/Galactose Isomerase J4048_RS18440 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4048_RS18445 PF02659 Putative manganese efflux pump J4048_RS18450 PF03481 Putative GTP-binding controlling metal-binding J4048_RS18450 PF01300 Telomere recombination J4048_RS18460 PF09551 Stage II sporulation protein R (spore_II_R) J4048_RS18465 PF17094 Uncharacterised protein family (UPF0715) J4048_RS18470 PF17247 Family of unknown function (DUF5316) J4048_RS18475 PF05175 Methyltransferase small domain J4048_RS18475 PF17827 PrmC N-terminal domain J4048_RS18480 PF03462 PCRF domain J4048_RS18480 PF00472 RF-1 domain J4048_RS18485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS18490 PF13411 MerR HTH family regulatory protein J4048_RS18495 PF03547 Membrane transport protein J4048_RS18500 PF00390 Malic enzyme, N-terminal domain J4048_RS18500 PF03949 Malic enzyme, NAD binding domain J4048_RS18505 PF00265 Thymidine kinase J4048_RS18510 PF01197 Ribosomal protein L31 J4048_RS18515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4048_RS18515 PF07498 Rho termination factor, N-terminal domain J4048_RS18515 PF07497 Rho termination factor, RNA-binding domain J4048_RS18520 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4048_RS18525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4048_RS18530 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4048_RS18535 PF01116 Fructose-bisphosphate aldolase class-II J4048_RS18540 PF00072 Response regulator receiver domain J4048_RS18545 PF10740 Domain of unknown function (DUF2529) J4048_RS18550 PF06418 CTP synthase N-terminus J4048_RS18550 PF00117 Glutamine amidotransferase class-I J4048_RS18555 PF05066 HB1, ASXL, restriction endonuclease HTH domain J4048_RS18560 PF02754 Cysteine-rich domain J4048_RS18560 PF13183 4Fe-4S dicluster domain J4048_RS18565 PF13091 PLD-like domain J4048_RS18570 PF03851 UV-endonuclease UvdE J4048_RS18580 PF00005 ABC transporter J4048_RS18580 PF00664 ABC transporter transmembrane region J4048_RS18585 PF13396 Phospholipase_D-nuclease N-terminal J4048_RS18585 PF13091 PLD-like domain J4048_RS18595 PF02665 Nitrate reductase gamma subunit J4048_RS18600 PF02613 Nitrate reductase delta subunit J4048_RS18605 PF13247 4Fe-4S dicluster domain J4048_RS18605 PF14711 Respiratory nitrate reductase beta C-terminal J4048_RS18610 PF00384 Molybdopterin oxidoreductase J4048_RS18610 PF01568 Molydopterin dinucleotide binding domain J4048_RS18610 PF14710 Respiratory nitrate reductase alpha N-terminal J4048_RS18620 PF14256 YwiC-like protein J4048_RS18625 PF00325 Bacterial regulatory proteins, crp family J4048_RS18625 PF00027 Cyclic nucleotide-binding domain J4048_RS18630 PF07690 Major Facilitator Superfamily J4048_RS18635 PF03485 Arginyl tRNA synthetase N terminal domain J4048_RS18635 PF05746 DALR anticodon binding domain J4048_RS18635 PF00750 tRNA synthetases class I (R) J4048_RS18640 PF09148 Domain of unknown function (DUF1934) J4048_RS18660 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS18665 PF11131 Rap-phr extracellular signalling J4048_RS18700 PF00491 Arginase family J4048_RS18705 PF17284 Spermidine synthase tetramerisation domain J4048_RS18710 PF00912 Transglycosylase J4048_RS18710 PF00905 Penicillin binding protein transpeptidase domain J4048_RS18720 PF08741 YwhD family J4048_RS18725 PF02163 Peptidase family M50 J4048_RS18730 PF01361 Tautomerase enzyme J4048_RS18735 PF01047 MarR family J4048_RS18740 PF13520 Amino acid permease J4048_RS18750 PF01966 HD domain J4048_RS18755 PF07293 Protein of unknown function (DUF1450) J4048_RS18765 PF03551 Transcriptional regulator PadR-like family J4048_RS18775 PF00005 ABC transporter J4048_RS18780 PF12679 ABC-2 family transporter protein J4048_RS18805 PF03099 Biotin/lipoate A/B protein ligase family J4048_RS18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS18810 PF03466 LysR substrate binding domain J4048_RS18815 PF03601 Conserved hypothetical protein 698 J4048_RS18820 PF01515 Phosphate acetyl/butaryl transferase J4048_RS18825 PF06778 Chlorite dismutase J4048_RS18835 PF00155 Aminotransferase class I and II J4048_RS18840 PF07690 Major Facilitator Superfamily J4048_RS18855 PF07883 Cupin domain J4048_RS18865 PF07690 Major Facilitator Superfamily J4048_RS18870 PF07690 Major Facilitator Superfamily J4048_RS18875 PF00324 Amino acid permease J4048_RS18880 PF01546 Peptidase family M20/M25/M40 J4048_RS18885 PF00171 Aldehyde dehydrogenase family J4048_RS18890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J4048_RS18890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J4048_RS18895 PF17735 Biofilm surface layer A J4048_RS18900 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4048_RS18905 PF04321 RmlD substrate binding domain J4048_RS18910 PF16363 GDP-mannose 4,6 dehydratase J4048_RS18915 PF00483 Nucleotidyl transferase J4048_RS18920 PF04101 Glycosyltransferase family 28 C-terminal domain J4048_RS18925 PF02348 Cytidylyltransferase J4048_RS18930 PF03102 NeuB family J4048_RS18930 PF08666 SAF domain J4048_RS18935 PF00583 Acetyltransferase (GNAT) family J4048_RS18940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4048_RS18945 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase J4048_RS18950 PF00535 Glycosyl transferase family 2 J4048_RS18955 PF09671 Spore coat protein (Spore_GerQ) J4048_RS18960 PF04241 Protein of unknown function (DUF423) J4048_RS18965 PF00860 Permease family J4048_RS18970 PF17261 Family of unknown function (DUF5327) J4048_RS18975 PF03167 Uracil DNA glycosylase superfamily J4048_RS18980 PF00535 Glycosyl transferase family 2 J4048_RS18995 PF03551 Transcriptional regulator PadR-like family J4048_RS19000 PF08543 Phosphomethylpyrimidine kinase J4048_RS19010 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4048_RS19010 PF08244 Glycosyl hydrolases family 32 C terminal J4048_RS19015 PF00367 phosphotransferase system, EIIB J4048_RS19015 PF02378 Phosphotransferase system, EIIC J4048_RS19020 PF03123 CAT RNA binding domain J4048_RS19020 PF00874 PRD domain J4048_RS19030 PF13860 FlgD Ig-like domain J4048_RS19030 PF05922 Peptidase inhibitor I9 J4048_RS19030 PF02225 PA domain J4048_RS19030 PF00082 Subtilase family J4048_RS19035 PF00296 Luciferase-like monooxygenase J4048_RS19040 PF00881 Nitroreductase family J4048_RS19045 PF01098 Cell cycle protein J4048_RS19050 PF00583 Acetyltransferase (GNAT) family J4048_RS19055 PF17368 Spore morphogenesis and germination YwcE J4048_RS19060 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4048_RS19065 PF00510 Cytochrome c oxidase subunit III J4048_RS19070 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4048_RS19075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4048_RS19075 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4048_RS19080 PF04226 Transglycosylase associated protein J4048_RS19085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4048_RS19085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4048_RS19090 PF10509 Galactokinase galactose-binding signature J4048_RS19090 PF08544 GHMP kinases C terminal J4048_RS19090 PF00288 GHMP kinases N terminal domain J4048_RS19095 PF04138 GtrA-like protein J4048_RS19100 PF00440 Bacterial regulatory proteins, tetR family J4048_RS19105 PF08671 Anti-repressor SinI J4048_RS19120 PF01323 DSBA-like thioredoxin domain J4048_RS19125 PF10518 TAT (twin-arginine translocation) pathway signal sequence J4048_RS19125 PF04261 Dyp-type peroxidase family J4048_RS19130 PF09375 Imelysin J4048_RS19135 PF02581 Thiamine monophosphate synthase J4048_RS19140 PF02110 Hydroxyethylthiazole kinase family J4048_RS19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS19145 PF03466 LysR substrate binding domain J4048_RS19150 PF03788 LrgA family J4048_RS19155 PF04172 LrgB-like family J4048_RS19160 PF09962 Uncharacterized conserved protein (DUF2196) J4048_RS19165 PF13411 MerR HTH family regulatory protein J4048_RS19165 PF07739 TipAS antibiotic-recognition domain J4048_RS19170 PF10026 Predicted Zn-dependent protease (DUF2268) J4048_RS19175 PF10672 S-adenosylmethionine-dependent methyltransferase J4048_RS19175 PF17785 PUA-like domain J4048_RS19180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS19185 PF02378 Phosphotransferase system, EIIC J4048_RS19190 PF00082 Subtilase family J4048_RS19195 PF01501 Glycosyl transferase family 8 J4048_RS19200 PF04607 Region found in RelA / SpoT proteins J4048_RS19205 PF01040 UbiA prenyltransferase family J4048_RS19210 PF12459 D-Ala-teichoic acid biosynthesis protein J4048_RS19215 PF00501 AMP-binding enzyme J4048_RS19215 PF13193 AMP-binding enzyme C-terminal domain J4048_RS19220 PF03062 MBOAT, membrane-bound O-acyltransferase family J4048_RS19225 PF00550 Phosphopantetheine attachment site J4048_RS19230 PF04914 DltD protein J4048_RS19235 PF01063 Amino-transferase class IV J4048_RS19240 PF02056 Family 4 glycosyl hydrolase J4048_RS19240 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4048_RS19245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4048_RS19250 PF02378 Phosphotransferase system, EIIC J4048_RS19255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS19260 PF00874 PRD domain J4048_RS19260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4048_RS19260 PF08279 HTH domain J4048_RS19260 PF05043 Mga helix-turn-helix domain J4048_RS19265 PF02245 Methylpurine-DNA glycosylase (MPG) J4048_RS19270 PF01032 FecCD transport family J4048_RS19275 PF01032 FecCD transport family J4048_RS19285 PF01022 Bacterial regulatory protein, arsR family J4048_RS19290 PF02040 Arsenical pump membrane protein J4048_RS19295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4048_RS19300 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4048_RS19305 PF02378 Phosphotransferase system, EIIC J4048_RS19310 PF00232 Glycosyl hydrolase family 1 J4048_RS19315 PF00480 ROK family J4048_RS19320 PF01238 Phosphomannose isomerase type I J4048_RS19325 PF02156 Glycosyl hydrolase family 26 J4048_RS19330 PF06628 Catalase-related immune-responsive J4048_RS19330 PF00199 Catalase J4048_RS19335 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family J4048_RS19340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4048_RS19345 PF01256 Carbohydrate kinase J4048_RS19350 PF00664 ABC transporter transmembrane region J4048_RS19350 PF00005 ABC transporter J4048_RS19355 PF00664 ABC transporter transmembrane region J4048_RS19355 PF00005 ABC transporter J4048_RS19360 PF02322 Cytochrome bd terminal oxidase subunit II J4048_RS19365 PF01654 Cytochrome bd terminal oxidase subunit I J4048_RS19370 PF03390 2-hydroxycarboxylate transporter family J4048_RS19375 PF01522 Polysaccharide deacetylase J4048_RS19380 PF00005 ABC transporter J4048_RS19380 PF17912 MalK OB fold domain J4048_RS19380 PF03459 TOBE domain J4048_RS19385 PF13556 PucR C-terminal helix-turn-helix domain J4048_RS19390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS19390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS19395 PF11611 Domain of unknown function (DUF4352) J4048_RS19400 PF16363 GDP-mannose 4,6 dehydratase J4048_RS19405 PF07687 Peptidase dimerisation domain J4048_RS19405 PF01546 Peptidase family M20/M25/M40 J4048_RS19415 PF04525 LURP-one-related J4048_RS19420 PF01717 Cobalamin-independent synthase, Catalytic domain J4048_RS19425 PF08241 Methyltransferase domain J4048_RS19430 PF07662 Na+ dependent nucleoside transporter C-terminus J4048_RS19430 PF01773 Na+ dependent nucleoside transporter N-terminus J4048_RS19445 PF06628 Catalase-related immune-responsive J4048_RS19445 PF00199 Catalase J4048_RS19445 PF18011 C-terminal domain found in long catalases J4048_RS19450 PF03600 Citrate transporter J4048_RS19455 PF00722 Glycosyl hydrolases family 16 J4048_RS19460 PF03123 CAT RNA binding domain J4048_RS19460 PF00874 PRD domain J4048_RS19465 PF11700 Vacuole effluxer Atg22 like J4048_RS19470 PF03880 DbpA RNA binding domain J4048_RS19470 PF00270 DEAD/DEAH box helicase J4048_RS19470 PF00271 Helicase conserved C-terminal domain J4048_RS19485 PF14176 YxiJ-like protein J4048_RS19520 PF05593 RHS Repeat J4048_RS19525 PF00544 Pectate lyase J4048_RS19530 PF00892 EamA-like transporter family J4048_RS19535 PF00582 Universal stress protein family J4048_RS19540 PF00232 Glycosyl hydrolase family 1 J4048_RS19545 PF02378 Phosphotransferase system, EIIC J4048_RS19545 PF00367 phosphotransferase system, EIIB J4048_RS19545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4048_RS19555 PF16369 C-terminal lipocalin-like domain J4048_RS19555 PF04616 Glycosyl hydrolases family 43 J4048_RS19560 PF09021 HutP J4048_RS19565 PF00221 Aromatic amino acid lyase J4048_RS19570 PF01175 Urocanase Rossmann-like domain J4048_RS19570 PF17391 Urocanase N-terminal domain J4048_RS19570 PF17392 Urocanase C-terminal domain J4048_RS19575 PF01979 Amidohydrolase family J4048_RS19580 PF00491 Arginase family J4048_RS19585 PF00324 Amino acid permease J4048_RS19590 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4048_RS19590 PF02885 Glycosyl transferase family, helical bundle domain J4048_RS19590 PF00591 Glycosyl transferase family, a/b domain J4048_RS19595 PF01773 Na+ dependent nucleoside transporter N-terminus J4048_RS19595 PF07662 Na+ dependent nucleoside transporter C-terminus J4048_RS19600 PF01791 DeoC/LacD family aldolase J4048_RS19605 PF04198 Putative sugar-binding domain J4048_RS19620 PF11631 Protein of unknown function (DUF3255) J4048_RS19640 PF01497 Periplasmic binding protein J4048_RS19645 PF06486 Protein of unknown function (DUF1093) J4048_RS19650 PF02687 FtsX-like permease family J4048_RS19655 PF00005 ABC transporter J4048_RS19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS19665 PF00072 Response regulator receiver domain J4048_RS19665 PF00486 Transcriptional regulatory protein, C terminal J4048_RS19670 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS19675 PF00486 Transcriptional regulatory protein, C terminal J4048_RS19675 PF00072 Response regulator receiver domain J4048_RS19680 PF00005 ABC transporter J4048_RS19695 PF01116 Fructose-bisphosphate aldolase class-II J4048_RS19700 PF01261 Xylose isomerase-like TIM barrel J4048_RS19705 PF01261 Xylose isomerase-like TIM barrel J4048_RS19710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4048_RS19710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4048_RS19715 PF07690 Major Facilitator Superfamily J4048_RS19720 PF01261 Xylose isomerase-like TIM barrel J4048_RS19725 PF00205 Thiamine pyrophosphate enzyme, central domain J4048_RS19725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4048_RS19725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4048_RS19730 PF00294 pfkB family carbohydrate kinase J4048_RS19735 PF04962 KduI/IolB family J4048_RS19740 PF00171 Aldehyde dehydrogenase family J4048_RS19745 PF08220 DeoR-like helix-turn-helix domain J4048_RS19745 PF00455 DeoR C terminal sensor domain J4048_RS19750 PF00248 Aldo/keto reductase family J4048_RS19755 PF00083 Sugar (and other) transporter J4048_RS19760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS19760 PF00183 Hsp90 protein J4048_RS19770 PF00072 Response regulator receiver domain J4048_RS19770 PF00196 Bacterial regulatory proteins, luxR family J4048_RS19775 PF07730 Histidine kinase J4048_RS19780 PF00487 Fatty acid desaturase J4048_RS19785 PF00440 Bacterial regulatory proteins, tetR family J4048_RS19790 PF00171 Aldehyde dehydrogenase family J4048_RS19795 PF13360 PQQ-like domain J4048_RS19795 PF13570 PQQ-like domain J4048_RS19795 PF01011 PQQ enzyme repeat J4048_RS19810 PF07690 Major Facilitator Superfamily J4048_RS19815 PF06271 RDD family J4048_RS19825 PF00578 AhpC/TSA family J4048_RS19830 PF13192 Thioredoxin domain J4048_RS19830 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4048_RS19835 PF13784 Fic/DOC family N-terminal J4048_RS19835 PF02661 Fic/DOC family J4048_RS19840 PF00324 Amino acid permease J4048_RS19845 PF06874 Firmicute fructose-1,6-bisphosphatase J4048_RS19850 PF01799 [2Fe-2S] binding domain J4048_RS19850 PF00111 2Fe-2S iron-sulfur cluster binding domain J4048_RS19860 PF01799 [2Fe-2S] binding domain J4048_RS19860 PF00111 2Fe-2S iron-sulfur cluster binding domain J4048_RS19860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4048_RS19860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4048_RS19865 PF12804 MobA-like NTP transferase domain J4048_RS19870 PF13478 XdhC Rossmann domain J4048_RS19870 PF02625 XdhC and CoxI family J4048_RS19895 PF02590 Predicted SPOUT methyltransferase J4048_RS19900 PF14116 YyzF-like protein J4048_RS19925 PF00248 Aldo/keto reductase family J4048_RS19930 PF00583 Acetyltransferase (GNAT) family J4048_RS19935 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS19940 PF00491 Arginase family J4048_RS19945 PF00324 Amino acid permease J4048_RS19950 PF00202 Aminotransferase class-III J4048_RS19955 PF07853 Protein of unknown function (DUF1648) J4048_RS19955 PF13630 SdpI/YhfL protein family J4048_RS19960 PF01022 Bacterial regulatory protein, arsR family J4048_RS19965 PF02954 Bacterial regulatory protein, Fis family J4048_RS19965 PF00158 Sigma-54 interaction domain J4048_RS19965 PF13426 PAS domain J4048_RS19975 PF12848 ABC transporter J4048_RS19975 PF16326 ABC transporter C-terminal domain J4048_RS19975 PF00005 ABC transporter J4048_RS19990 PF00899 ThiF family J4048_RS19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS19995 PF18698 Histidine kinase sensor domain J4048_RS19995 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS19995 PF00672 HAMP domain J4048_RS20000 PF00072 Response regulator receiver domain J4048_RS20000 PF00486 Transcriptional regulatory protein, C terminal J4048_RS20005 PF13180 PDZ domain J4048_RS20010 PF00753 Metallo-beta-lactamase superfamily J4048_RS20015 PF09648 YycH protein J4048_RS20020 PF07435 YycH protein J4048_RS20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS20025 PF13426 PAS domain J4048_RS20025 PF00512 His Kinase A (phospho-acceptor) domain J4048_RS20025 PF00672 HAMP domain J4048_RS20030 PF00486 Transcriptional regulatory protein, C terminal J4048_RS20030 PF00072 Response regulator receiver domain J4048_RS20055 PF00709 Adenylosuccinate synthetase J4048_RS20060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS20065 PF03796 DnaB-like helicase C terminal domain J4048_RS20065 PF00772 DnaB-like helicase N terminal domain J4048_RS20070 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) J4048_RS20080 PF14174 YycC-like protein J4048_RS20085 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J4048_RS20090 PF13439 Glycosyltransferase Family 4 J4048_RS20090 PF00534 Glycosyl transferases group 1 J4048_RS20100 PF02222 ATP-grasp domain J4048_RS20105 PF00534 Glycosyl transferases group 1 J4048_RS20105 PF13439 Glycosyltransferase Family 4 J4048_RS20120 PF01281 Ribosomal protein L9, N-terminal domain J4048_RS20120 PF03948 Ribosomal protein L9, C-terminal domain J4048_RS20125 PF02272 DHHA1 domain J4048_RS20125 PF01368 DHH family J4048_RS20130 PF09991 Predicted membrane protein (DUF2232) J4048_RS20140 PF07875 Coat F domain J4048_RS20145 PF01638 HxlR-like helix-turn-helix J4048_RS20150 PF02833 DHHA2 domain J4048_RS20150 PF01368 DHH family J4048_RS20155 PF00892 EamA-like transporter family J4048_RS20160 PF02435 Levansucrase/Invertase J4048_RS20165 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4048_RS20165 PF08244 Glycosyl hydrolases family 32 C terminal J4048_RS20170 PF00392 Bacterial regulatory proteins, gntR family J4048_RS20170 PF07729 FCD domain J4048_RS20175 PF05163 DinB family J4048_RS20180 PF07690 Major Facilitator Superfamily J4048_RS20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS20185 PF03466 LysR substrate binding domain J4048_RS20190 PF01810 LysE type translocator J4048_RS20200 PF00881 Nitroreductase family J4048_RS20205 PF01047 MarR family J4048_RS20210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4048_RS20210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4048_RS20215 PF01047 MarR family J4048_RS20220 PF13673 Acetyltransferase (GNAT) domain J4048_RS20230 PF02627 Carboxymuconolactone decarboxylase family J4048_RS20235 PF03466 LysR substrate binding domain J4048_RS20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4048_RS20245 PF00155 Aminotransferase class I and II J4048_RS20245 PF00392 Bacterial regulatory proteins, gntR family J4048_RS20250 PF00892 EamA-like transporter family J4048_RS20255 PF03190 Protein of unknown function, DUF255 J4048_RS20260 PF02517 CPBP intramembrane metalloprotease J4048_RS20265 PF00083 Sugar (and other) transporter J4048_RS20270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4048_RS20275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4048_RS20275 PF00356 Bacterial regulatory proteins, lacI family J4048_RS20280 PF03372 Endonuclease/Exonuclease/phosphatase family J4048_RS20285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4048_RS20285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4048_RS20290 PF02805 Metal binding domain of Ada J4048_RS20290 PF12833 Helix-turn-helix domain J4048_RS20295 PF01084 Ribosomal protein S18 J4048_RS20300 PF00436 Single-strand binding protein family J4048_RS20305 PF01250 Ribosomal protein S6 J4048_RS20310 PF06071 Protein of unknown function (DUF933) J4048_RS20310 PF01926 50S ribosome-binding GTPase J4048_RS20315 PF01568 Molydopterin dinucleotide binding domain J4048_RS20315 PF00384 Molybdopterin oxidoreductase J4048_RS20315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4048_RS20320 PF06107 Bacterial protein of unknown function (DUF951) J4048_RS20335 PF06866 Protein of unknown function (DUF1256) J4048_RS20340 PF02195 ParB-like nuclease domain J4048_RS20340 PF17762 HTH domain found in ParB protein J4048_RS20345 PF13614 AAA domain J4048_RS20350 PF17762 HTH domain found in ParB protein J4048_RS20350 PF02195 ParB-like nuclease domain J4048_RS20355 PF02527 rRNA small subunit methyltransferase G J4048_RS20360 PF01134 Glucose inhibited division protein A J4048_RS20360 PF13932 GidA associated domain J4048_RS20365 PF01926 50S ribosome-binding GTPase J4048_RS20365 PF12631 MnmE helical domain J4048_RS20365 PF10396 GTP-binding protein TrmE N-terminus J4048_RS20370 PF14804 Jag N-terminus J4048_RS20370 PF01424 R3H domain J4048_RS20375 PF02096 60Kd inner membrane protein J4048_RS20380 PF00825 Ribonuclease P J4048_RS20385 PF00468 Ribosomal protein L34 J4048_RS20415 PF12841 YvrJ protein family J4048_RS20420 PF04542 Sigma-70 region 2 J4048_RS20420 PF04539 Sigma-70 region 3 J4048_RS20420 PF04545 Sigma-70, region 4 J4048_RS20445 PF02334 Replication terminator protein J4048_RS20455 PF00145 C-5 cytosine-specific DNA methylase J4048_RS20465 PF00269 Small, acid-soluble spore proteins, alpha/beta type J4048_RS20485 PF01367 5'-3' exonuclease, C-terminal SAM fold J4048_RS20485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4048_RS20485 PF00476 DNA polymerase family A J4048_RS20485 PF01612 3'-5' exonuclease J4048_RS20535 PF00565 Staphylococcal nuclease homologue J4048_RS20580 PF03796 DnaB-like helicase C terminal domain J4048_RS20600 PF00270 DEAD/DEAH box helicase J4048_RS20600 PF00271 Helicase conserved C-terminal domain J4048_RS20600 PF03880 DbpA RNA binding domain J4048_RS20700 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS20770 PF00533 BRCA1 C Terminus (BRCT) domain J4048_RS20770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4048_RS20770 PF12826 Helix-hairpin-helix motif J4048_RS20770 PF03120 NAD-dependent DNA ligase OB-fold domain J4048_RS20770 PF01653 NAD-dependent DNA ligase adenylation domain J4048_RS20795 PF01966 HD domain J4048_RS20870 PF01580 FtsK/SpoIIIE family J4048_RS20870 PF09397 Ftsk gamma domain J4048_RS20870 PF17854 FtsK alpha domain J4048_RS20930 PF00877 NlpC/P60 family J4048_RS20940 PF00416 Ribosomal protein S13/S18 J4048_RS20980 PF00476 DNA polymerase family A J4048_RS20980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4048_RS20980 PF01612 3'-5' exonuclease J4048_RS20980 PF01367 5'-3' exonuclease, C-terminal SAM fold J4048_RS21045 PF02457 DisA bacterial checkpoint controller nucleotide-binding J4048_RS21045 PF10372 Bacterial membrane-spanning protein N-terminus J4048_RS21060 PF00268 Ribonucleotide reductase, small chain J4048_RS21065 PF08343 Ribonucleotide reductase N-terminal J4048_RS21065 PF02867 Ribonucleotide reductase, barrel domain J4048_RS21065 PF00317 Ribonucleotide reductase, all-alpha domain J4048_RS21080 PF00437 Type II/IV secretion system protein J4048_RS21150 PF00521 DNA gyrase/topoisomerase IV, subunit A J4048_RS21150 PF03989 DNA gyrase C-terminal domain, beta-propeller J4048_RS21160 PF06908 YspA SLOG family J4048_RS21205 PF13457 GW (Gly-Tryp) dipeptide domain J4048_RS21205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4048_RS21295 PF09643 YopX protein J4048_RS21315 PF09643 YopX protein J4048_RS21365 PF01751 Toprim domain J4048_RS21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4048_RS21365 PF00986 DNA gyrase B subunit, carboxyl terminus J4048_RS21365 PF00204 DNA gyrase B J4048_RS21455 PF00580 UvrD/REP helicase N-terminal domain J4048_RS21455 PF13361 UvrD-like helicase C-terminal domain J4048_RS21500 PF01555 DNA methylase J4048_RS21670 PF13614 AAA domain J4048_RS21725 PF00437 Type II/IV secretion system protein J4048_RS21765 PF13154 Protein of unknown function (DUF3991) J4048_RS21795 PF00436 Single-strand binding protein family J4048_RS21805 PF00589 Phage integrase family J4048_RS21835 PF01068 ATP dependent DNA ligase domain J4048_RS21855 PF00565 Staphylococcal nuclease homologue J4048_RS21945 PF11798 IMS family HHH motif J4048_RS21945 PF00817 impB/mucB/samB family J4048_RS21945 PF11799 impB/mucB/samB family C-terminal domain J4048_RS21985 PF13176 Tetratricopeptide repeat J4048_RS21985 PF18801 response regulator aspartate phosphatase H, N terminal J4048_RS21990 PF01381 Helix-turn-helix J4048_RS21990 PF08671 Anti-repressor SinI J4048_RS22040 PF00437 Type II/IV secretion system protein J4048_RS22125 PF00877 NlpC/P60 family