locus-tag	class	description
CJF63_RS00100	COG1247	-acetyltransferase
CJF63_RS00130	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CJF63_RS00140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS00150	COG1278	Cold shock
CJF63_RS00165	COG0010	Belongs to the arginase family
CJF63_RS00170	COG0561	phosphatase activity
CJF63_RS00220	COG0583	DNA-binding transcription factor activity
CJF63_RS00225	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJF63_RS00240	COG0583	DNA-binding transcription factor activity
CJF63_RS00245	COG2258	MOSC domain
CJF63_RS00260	COG1132	(ABC) transporter
CJF63_RS00265	COG1132	(ABC) transporter
CJF63_RS00285	COG1396	sequence-specific DNA binding
CJF63_RS00310	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
CJF63_RS00315	COG1595	DNA-templated transcription, initiation
CJF63_RS00345	COG1649	PFAM Uncharacterised BCR, COG1649
CJF63_RS00375	COG2971	BadF BadG BcrA BcrD
CJF63_RS00380	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CJF63_RS00385	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CJF63_RS00410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS00440	COG1309	transcriptional regulator
CJF63_RS00455	COG1136	(ABC) transporter
CJF63_RS00455	COG0577	efflux transmembrane transporter activity
CJF63_RS00460	COG0500	methyltransferase
CJF63_RS00460	COG3615	Tellurite resistance protein tehB
CJF63_RS00470	COG2226	methyltransferase
CJF63_RS00475	COG3961	Belongs to the TPP enzyme family
CJF63_RS00480	COG1846	Transcriptional regulator
CJF63_RS00530	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJF63_RS00550	COG1595	DNA-templated transcription, initiation
CJF63_RS00560	COG0768	penicillin binding
CJF63_RS00565	COG0768	penicillin binding
CJF63_RS00570	COG2367	Beta-lactamase
CJF63_RS00575	COG0671	phosphoesterase, PA-phosphatase related
CJF63_RS00580	COG1609	Transcriptional regulator
CJF63_RS00585	COG2814	Major facilitator Superfamily
CJF63_RS00590	COG0673	inositol 2-dehydrogenase activity
CJF63_RS00600	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS00615	COG0191	fructose-bisphosphate aldolase activity
CJF63_RS00620	COG3718	enzyme involved in inositol metabolism
CJF63_RS00645	COG0457	Tetratricopeptide repeat
CJF63_RS00650	COG1476	TRANSCRIPTIONal
CJF63_RS00665	COG1876	peptidase activity
CJF63_RS00685	COG1309	transcriptional regulator
CJF63_RS00690	COG0488	(ABC) transporter
CJF63_RS00705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS00720	COG1252	NADH dehydrogenase
CJF63_RS00725	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS00740	COG1131	(ABC) transporter
CJF63_RS00750	COG1309	transcriptional regulator
CJF63_RS00770	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS00775	COG0439	Biotin carboxylase
CJF63_RS00780	COG0511	ligase activity, forming carbon-carbon bonds
CJF63_RS00785	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJF63_RS00790	COG1024	Enoyl-CoA hydratase
CJF63_RS00795	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CJF63_RS00800	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJF63_RS00810	COG1247	-acetyltransferase
CJF63_RS00815	COG0572	uridine kinase
CJF63_RS00825	COG2318	DinB family
CJF63_RS00830	COG1686	Belongs to the peptidase S11 family
CJF63_RS00860	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CJF63_RS00900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJF63_RS00900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJF63_RS00925	COG2814	Major facilitator Superfamily
CJF63_RS00945	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJF63_RS00965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS00980	COG1063	alcohol dehydrogenase
CJF63_RS01010	COG3773	Cell wall hydrolase
CJF63_RS01025	COG0745	RESPONSE REGULATOR receiver
CJF63_RS01055	COG1136	(ABC) transporter
CJF63_RS01080	COG0460	homoserine dehydrogenase
CJF63_RS01085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS01095	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CJF63_RS01190	COG2124	cytochrome p450
CJF63_RS01225	COG0561	phosphatase activity
CJF63_RS01235	COG5002	protein histidine kinase activity
CJF63_RS01240	COG0768	penicillin binding
CJF63_RS01245	COG1819	glycosyl
CJF63_RS01250	COG1794	racemase activity, acting on amino acids and derivatives
CJF63_RS01260	COG1122	ATPase activity
CJF63_RS01285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJF63_RS01290	COG0604	alcohol dehydrogenase
CJF63_RS01295	COG0768	penicillin binding
CJF63_RS01305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJF63_RS01340	COG0693	protein deglycase activity
CJF63_RS01380	COG2814	Major facilitator Superfamily
CJF63_RS01400	COG0584	glycerophosphoryl diester phosphodiesterase
CJF63_RS01420	COG0697	spore germination
CJF63_RS01450	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJF63_RS01460	COG2223	nitrite transmembrane transporter activity
CJF63_RS01475	COG2816	NAD+ diphosphatase activity
CJF63_RS01480	COG0592	DNA-directed DNA polymerase activity
CJF63_RS01485	COG1051	belongs to the nudix hydrolase family
CJF63_RS01520	COG3878	Protein conserved in bacteria
CJF63_RS01570	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJF63_RS01585	COG0322	excinuclease ABC activity
CJF63_RS01630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJF63_RS01655	COG1011	Hydrolase
CJF63_RS01680	COG0076	glutamate decarboxylase activity
CJF63_RS01695	COG1523	belongs to the glycosyl hydrolase 13 family
CJF63_RS01700	COG3227	Zinc metalloprotease (Elastase)
CJF63_RS01720	COG0201	protein transport
CJF63_RS01730	COG0697	spore germination
CJF63_RS01735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS01765	COG4129	membrane
CJF63_RS01770	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS01785	COG2959	enzyme of heme biosynthesis
CJF63_RS01805	COG3483	tryptophan 2,3-dioxygenase activity
CJF63_RS01810	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CJF63_RS01815	COG3844	kynureninase activity
CJF63_RS01820	COG1309	transcriptional regulator
CJF63_RS01855	COG3284	Transcriptional regulator
CJF63_RS01875	COG1349	DNA-binding transcription factor activity
CJF63_RS01895	COG1959	2 iron, 2 sulfur cluster binding
CJF63_RS01915	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJF63_RS01920	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJF63_RS01925	COG0022	dehydrogenase e1 component
CJF63_RS01930	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJF63_RS01940	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS01945	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJF63_RS01945	COG0456	acetyltransferase
CJF63_RS01980	COG4176	ABC-type proline glycine betaine transport system permease component
CJF63_RS01985	COG0517	IMP dehydrogenase activity
CJF63_RS01985	COG4175	Glycine betaine
CJF63_RS02010	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CJF63_RS02015	COG2153	protein acetylation
CJF63_RS02020	COG3397	chitin binding
CJF63_RS02035	COG2205	protein histidine kinase activity
CJF63_RS02065	COG2333	competence protein COMEC
CJF63_RS02065	COG0658	competence protein
CJF63_RS02115	COG3973	AAA domain
CJF63_RS02130	COG2105	PFAM AIG2 family protein
CJF63_RS02135	COG0514	ATP-dependent DNA helicase (RecQ)
CJF63_RS02165	COG4637	Psort location Cytoplasmic, score
CJF63_RS02190	COG3397	chitin binding
CJF63_RS02200	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJF63_RS02205	COG1115	amino acid carrier protein
CJF63_RS02210	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS02215	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJF63_RS02225	COG3938	Belongs to the proline racemase family
CJF63_RS02230	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJF63_RS02270	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS02285	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CJF63_RS02290	COG0519	Catalyzes the synthesis of GMP from XMP
CJF63_RS02295	COG4166	transmembrane transport
CJF63_RS02305	COG4948	Mandelate Racemase Muconate Lactonizing
CJF63_RS02355	COG2936	dipeptidyl-peptidase activity
CJF63_RS02360	COG5002	protein histidine kinase activity
CJF63_RS02400	COG1164	Oligoendopeptidase f
CJF63_RS02415	COG1307	EDD domain protein, DegV family
CJF63_RS02440	COG2814	Major facilitator Superfamily
CJF63_RS02450	COG1664	Polymer-forming cytoskeletal
CJF63_RS02455	COG0789	Transcriptional regulator
CJF63_RS02460	COG4533	DNA binding
CJF63_RS02465	COG0477	Major facilitator Superfamily
CJF63_RS02465	COG2814	Major facilitator Superfamily
CJF63_RS02485	COG2261	transglycosylase associated protein
CJF63_RS02500	COG2226	methyltransferase
CJF63_RS02540	COG0436	Aminotransferase
CJF63_RS02545	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CJF63_RS02620	COG0628	permease
CJF63_RS02635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJF63_RS02640	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJF63_RS02645	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJF63_RS02650	COG1116	anion transmembrane transporter activity
CJF63_RS02670	COG2816	NAD+ diphosphatase activity
CJF63_RS02690	COG2746	aminoglycoside 3-N-acetyltransferase activity
CJF63_RS02720	COG0697	spore germination
CJF63_RS02725	COG2318	DinB family
CJF63_RS02745	COG4912	Dna alkylation repair
CJF63_RS02770	COG0861	Integral membrane protein TerC family
CJF63_RS02775	COG1368	sulfuric ester hydrolase activity
CJF63_RS02785	COG0488	(ABC) transporter
CJF63_RS02795	COG2409	Drug exporters of the RND superfamily
CJF63_RS02795	COG1033	growth of symbiont in host cell
CJF63_RS02800	COG1033	growth of symbiont in host cell
CJF63_RS02800	COG2409	Drug exporters of the RND superfamily
CJF63_RS02805	COG1033	growth of symbiont in host cell
CJF63_RS02805	COG2409	Drug exporters of the RND superfamily
CJF63_RS02810	COG1309	transcriptional regulator
CJF63_RS02825	COG0287	Prephenate dehydrogenase
CJF63_RS02830	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CJF63_RS02835	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CJF63_RS02845	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CJF63_RS02845	COG1605	Chorismate mutase
CJF63_RS02895	COG1388	LysM domain
CJF63_RS02895	COG3584	3D domain protein
CJF63_RS02910	COG1595	DNA-templated transcription, initiation
CJF63_RS02935	COG1879	ABC-type sugar transport system periplasmic component
CJF63_RS02945	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJF63_RS02955	COG2390	Transcriptional regulator
CJF63_RS02990	COG2329	Antibiotic biosynthesis monooxygenase
CJF63_RS03010	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS03020	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CJF63_RS03030	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJF63_RS03035	COG4187	Peptidase family M20/M25/M40
CJF63_RS03040	COG1414	Transcriptional regulator
CJF63_RS03050	COG0833	amino acid
CJF63_RS03055	COG1690	Belongs to the RtcB family
CJF63_RS03060	COG3239	Fatty acid desaturase
CJF63_RS03065	COG1785	Belongs to the alkaline phosphatase family
CJF63_RS03075	COG3655	Transcriptional regulator
CJF63_RS03090	COG4377	Putative membrane peptidase family (DUF2324)
CJF63_RS03100	COG3279	Response regulator of the LytR AlgR family
CJF63_RS03110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS03115	COG0346	lactoylglutathione lyase activity
CJF63_RS03135	COG0714	Associated with various cellular activities
CJF63_RS03160	COG0463	Glycosyl transferase, family 2
CJF63_RS03185	COG0463	Glycosyl transferase, family 2
CJF63_RS03195	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJF63_RS03200	COG0753	catalase activity
CJF63_RS03210	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CJF63_RS03235	COG0714	Associated with various cellular activities
CJF63_RS03245	COG0778	Nitroreductase
CJF63_RS03250	COG1846	Transcriptional regulator
CJF63_RS03290	COG1725	Transcriptional regulator
CJF63_RS03305	COG1136	(ABC) transporter
CJF63_RS03305	COG0577	efflux transmembrane transporter activity
CJF63_RS03330	COG2207	Transcriptional regulator
CJF63_RS03335	COG0456	acetyltransferase
CJF63_RS03355	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS03375	COG0642	Histidine kinase
CJF63_RS03380	COG0745	RESPONSE REGULATOR receiver
CJF63_RS03385	COG0596	Alpha beta hydrolase
CJF63_RS03415	COG0730	response to heat
CJF63_RS03425	COG0833	amino acid
CJF63_RS03435	COG4335	DNA alkylation repair
CJF63_RS03475	COG0768	penicillin binding
CJF63_RS03485	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJF63_RS03520	COG1984	allophanate hydrolase subunit 2
CJF63_RS03525	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CJF63_RS03530	COG1414	Transcriptional regulator
CJF63_RS03550	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS03555	COG0640	Transcriptional regulator
CJF63_RS03565	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS03585	COG3314	Sporulation integral membrane protein YlbJ
CJF63_RS03600	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CJF63_RS03615	COG3848	Pyruvate phosphate dikinase
CJF63_RS03615	COG0574	Belongs to the PEP-utilizing enzyme family
CJF63_RS03625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS03640	COG5577	PFAM Coat F domain
CJF63_RS03650	COG3403	YqcI/YcgG family
CJF63_RS03655	COG1280	lysine exporter protein (LysE YggA)
CJF63_RS03690	COG1063	alcohol dehydrogenase
CJF63_RS03705	COG1027	Aspartate ammonia-lyase
CJF63_RS03710	COG0252	asparaginase activity
CJF63_RS03715	COG1396	sequence-specific DNA binding
CJF63_RS03725	COG0322	excinuclease ABC activity
CJF63_RS03730	COG0531	amino acid
CJF63_RS03740	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJF63_RS03765	COG0531	amino acid
CJF63_RS03770	COG0697	spore germination
CJF63_RS03780	COG0784	Response regulator, receiver
CJF63_RS03790	COG2066	Belongs to the glutaminase family
CJF63_RS03825	COG0737	Belongs to the 5'-nucleotidase family
CJF63_RS03830	COG0753	catalase activity
CJF63_RS03835	COG2267	carboxylic ester hydrolase activity
CJF63_RS03840	COG1335	isochorismatase
CJF63_RS03860	COG0583	DNA-binding transcription factor activity
CJF63_RS03870	COG1846	Transcriptional regulator
CJF63_RS03915	COG0415	Belongs to the DNA photolyase family
CJF63_RS03920	COG0288	reversible hydration of carbon dioxide
CJF63_RS03930	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CJF63_RS03935	COG5609	conserved protein (DUF2294)
CJF63_RS03950	COG1575	Belongs to the MenA family. Type 1 subfamily
CJF63_RS03955	COG2267	carboxylic ester hydrolase activity
CJF63_RS03965	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJF63_RS03970	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJF63_RS03975	COG1121	(ABC) transporter
CJF63_RS04005	COG0798	PFAM Bile acid sodium symporter
CJF63_RS04010	COG0346	lactoylglutathione lyase activity
CJF63_RS04015	COG0640	Transcriptional regulator
CJF63_RS04030	COG0443	Heat shock 70 kDa protein
CJF63_RS04050	COG1522	sequence-specific DNA binding
CJF63_RS04065	COG0346	lactoylglutathione lyase activity
CJF63_RS04090	COG2169	Transcriptional regulator
CJF63_RS04140	COG2814	Major facilitator Superfamily
CJF63_RS04170	COG0745	RESPONSE REGULATOR receiver
CJF63_RS04175	COG3850	Histidine kinase
CJF63_RS04175	COG5002	protein histidine kinase activity
CJF63_RS04210	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CJF63_RS04240	COG1476	TRANSCRIPTIONal
CJF63_RS04255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS04260	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJF63_RS04270	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS04275	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CJF63_RS04290	COG1136	(ABC) transporter
CJF63_RS04295	COG0577	efflux transmembrane transporter activity
CJF63_RS04315	COG3850	Histidine kinase
CJF63_RS04315	COG5002	protein histidine kinase activity
CJF63_RS04325	COG2364	Membrane
CJF63_RS04330	COG1846	Transcriptional regulator
CJF63_RS04340	COG2808	Putative FMN-binding domain
CJF63_RS04345	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS04350	COG2271	Major facilitator Superfamily
CJF63_RS04355	COG1556	Lactate utilization protein
CJF63_RS04360	COG1139	Iron-sulfur cluster binding protein
CJF63_RS04370	COG0583	DNA-binding transcription factor activity
CJF63_RS04380	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJF63_RS04410	COG0738	Major facilitator superfamily
CJF63_RS04415	COG0673	inositol 2-dehydrogenase activity
CJF63_RS04420	COG0561	phosphatase activity
CJF63_RS04430	COG1609	Transcriptional regulator
CJF63_RS04435	COG0457	Tetratricopeptide repeat
CJF63_RS04455	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJF63_RS04485	COG0534	Mate efflux family protein
CJF63_RS04505	COG2184	nucleotidyltransferase activity
CJF63_RS04510	COG2814	Major facilitator Superfamily
CJF63_RS04515	COG1309	transcriptional regulator
CJF63_RS04530	COG0814	amino acid
CJF63_RS04535	COG1760	l-serine dehydratase
CJF63_RS04540	COG1760	l-serine dehydratase
CJF63_RS04555	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS04560	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CJF63_RS04570	COG1335	isochorismatase
CJF63_RS04575	COG1522	sequence-specific DNA binding
CJF63_RS04580	COG0531	amino acid
CJF63_RS04600	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJF63_RS04620	COG1595	DNA-templated transcription, initiation
CJF63_RS04635	COG0662	Cupin 2, conserved barrel domain protein
CJF63_RS04645	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS04645	COG2207	Transcriptional regulator
CJF63_RS04695	COG0477	Major facilitator Superfamily
CJF63_RS04705	COG1846	Transcriptional regulator
CJF63_RS04710	COG2814	Major facilitator Superfamily
CJF63_RS04725	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CJF63_RS04730	COG1131	(ABC) transporter
CJF63_RS04750	COG2076	Multidrug Resistance protein
CJF63_RS04755	COG1309	transcriptional regulator
CJF63_RS04770	COG2031	fatty acid transporter
CJF63_RS04780	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJF63_RS04810	COG1122	ATPase activity
CJF63_RS04815	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJF63_RS04830	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CJF63_RS04835	COG1288	antiporter activity
CJF63_RS04840	COG2356	endonuclease I
CJF63_RS04855	COG3620	sequence-specific DNA binding
CJF63_RS04860	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CJF63_RS04865	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJF63_RS04870	COG0124	histidyl-tRNA synthetase
CJF63_RS04885	COG1733	regulation of RNA biosynthetic process
CJF63_RS04890	COG0778	Nitroreductase
CJF63_RS04915	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS04925	COG1131	(ABC) transporter
CJF63_RS04950	COG1011	Hydrolase
CJF63_RS04960	COG2365	Tyrosine phosphatase family
CJF63_RS04985	COG0346	lactoylglutathione lyase activity
CJF63_RS04990	COG1940	carbohydrate kinase activity
CJF63_RS04995	COG0738	Major facilitator superfamily
CJF63_RS05000	COG0110	maltose O-acetyltransferase activity
CJF63_RS05015	COG0577	efflux transmembrane transporter activity
CJF63_RS05015	COG1136	(ABC) transporter
CJF63_RS05030	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CJF63_RS05035	COG0628	permease
CJF63_RS05055	COG2226	methyltransferase
CJF63_RS05065	COG0477	Major facilitator Superfamily
CJF63_RS05095	COG1253	flavin adenine dinucleotide binding
CJF63_RS05100	COG0789	Transcriptional regulator
CJF63_RS05105	COG0697	spore germination
CJF63_RS05110	COG1357	PFAM Pentapeptide repeats (8 copies)
CJF63_RS05115	COG3813	Protein conserved in bacteria
CJF63_RS05120	COG2706	6-phosphogluconolactonase activity
CJF63_RS05125	COG1070	Carbohydrate kinase
CJF63_RS05135	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CJF63_RS05140	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CJF63_RS05150	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJF63_RS05155	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJF63_RS05160	COG0604	alcohol dehydrogenase
CJF63_RS05165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJF63_RS05175	COG0604	alcohol dehydrogenase
CJF63_RS05175	COG3321	synthase
CJF63_RS05185	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS05210	COG0656	L-ascorbic acid biosynthetic process
CJF63_RS05215	COG2814	Major facilitator Superfamily
CJF63_RS05235	COG0346	lactoylglutathione lyase activity
CJF63_RS05240	COG0814	amino acid
CJF63_RS05265	COG1393	Belongs to the ArsC family
CJF63_RS05275	COG1733	regulation of RNA biosynthetic process
CJF63_RS05280	COG2188	Transcriptional regulator
CJF63_RS05290	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJF63_RS05295	COG1733	regulation of RNA biosynthetic process
CJF63_RS05300	COG1733	regulation of RNA biosynthetic process
CJF63_RS05315	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS05335	COG0384	phenazine biosynthesis protein PhzF
CJF63_RS05345	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS05355	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS05365	COG1733	regulation of RNA biosynthetic process
CJF63_RS05400	COG1191	sigma factor activity
CJF63_RS05415	COG1309	transcriptional regulator
CJF63_RS05435	COG3152	Membrane
CJF63_RS05465	COG1151	hydroxylamine reductase activity
CJF63_RS05480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS05485	COG3757	hydrolase, family 25
CJF63_RS05485	COG3409	Peptidoglycan-binding domain 1 protein
CJF63_RS05520	COG2072	flavoprotein involved in K transport
CJF63_RS05560	COG1113	amino acid transport
CJF63_RS05565	COG2814	Major facilitator Superfamily
CJF63_RS05600	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CJF63_RS05605	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJF63_RS05635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS05640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS05645	COG3739	integral membrane protein
CJF63_RS05650	COG0384	phenazine biosynthesis protein PhzF
CJF63_RS05680	COG0583	DNA-binding transcription factor activity
CJF63_RS05700	COG1193	negative regulation of DNA recombination
CJF63_RS05720	COG1164	Oligoendopeptidase f
CJF63_RS05725	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJF63_RS05755	COG0584	glycerophosphoryl diester phosphodiesterase
CJF63_RS05780	COG0640	Transcriptional regulator
CJF63_RS05785	COG0604	alcohol dehydrogenase
CJF63_RS05805	COG2808	Putative FMN-binding domain
CJF63_RS05810	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJF63_RS05820	COG0385	Bile acid
CJF63_RS05825	COG0277	FAD linked oxidase domain protein
CJF63_RS05865	COG1216	Glycosyl transferase, family 2
CJF63_RS05870	COG1024	Enoyl-CoA hydratase
CJF63_RS05880	COG1285	pathogenesis
CJF63_RS05895	COG2514	catechol 2,3-dioxygenase activity
CJF63_RS05900	COG2720	vancomycin resistance protein
CJF63_RS05940	COG0716	FMN binding
CJF63_RS05970	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS05980	COG0165	Argininosuccinate lyase
CJF63_RS05995	COG4145	pantothenate transmembrane transporter activity
CJF63_RS06005	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS06010	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS06020	COG1657	PFAM Prenyltransferase squalene oxidase
CJF63_RS06025	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CJF63_RS06030	COG2962	Rard protein
CJF63_RS06035	COG3326	Membrane
CJF63_RS06050	COG0489	protein tyrosine kinase activity
CJF63_RS06060	COG0314	molybdopterin synthase activity
CJF63_RS06065	COG0303	'Molybdopterin
CJF63_RS06070	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJF63_RS06075	COG2116	formate transmembrane transporter activity
CJF63_RS06090	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CJF63_RS06095	COG5609	conserved protein (DUF2294)
CJF63_RS06100	COG2427	Protein of unknown function (DUF1641)
CJF63_RS06105	COG3383	formate dehydrogenase (NAD+) activity
CJF63_RS06115	COG0697	spore germination
CJF63_RS06155	COG2226	methyltransferase
CJF63_RS06160	COG4166	transmembrane transport
CJF63_RS06165	COG4166	transmembrane transport
CJF63_RS06170	COG4166	transmembrane transport
CJF63_RS06175	COG1301	dicarboxylic acid transport
CJF63_RS06180	COG1316	TRANSCRIPTIONal
CJF63_RS06190	COG1595	DNA-templated transcription, initiation
CJF63_RS06210	COG1131	(ABC) transporter
CJF63_RS06220	COG0673	inositol 2-dehydrogenase activity
CJF63_RS06225	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJF63_RS06230	COG0187	DNA topoisomerase II activity
CJF63_RS06240	COG1832	CoA-binding protein
CJF63_RS06245	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJF63_RS06250	COG0745	RESPONSE REGULATOR receiver
CJF63_RS06265	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CJF63_RS06270	COG4841	protein insertion into membrane
CJF63_RS06275	COG0824	Thioesterase
CJF63_RS06310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJF63_RS06320	COG2274	protein secretion by the type I secretion system
CJF63_RS06325	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CJF63_RS06355	COG2211	Major facilitator Superfamily
CJF63_RS06365	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJF63_RS06380	COG0183	Belongs to the thiolase family
CJF63_RS06385	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS06390	COG1268	BioY protein
CJF63_RS06395	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS06450	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS06465	COG5002	protein histidine kinase activity
CJF63_RS06470	COG0400	carboxylic ester hydrolase activity
CJF63_RS06475	COG0346	lactoylglutathione lyase activity
CJF63_RS06480	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJF63_RS06485	COG0069	glutamate synthase activity
CJF63_RS06490	COG1902	pentaerythritol trinitrate reductase activity
CJF63_RS06495	COG1329	Transcriptional regulator
CJF63_RS06500	COG0010	Belongs to the arginase family
CJF63_RS06525	COG2226	methyltransferase
CJF63_RS06585	COG4846	Membrane protein involved in cytochrome C biogenesis
CJF63_RS06590	COG0785	Cytochrome C biogenesis protein
CJF63_RS06605	COG0583	DNA-binding transcription factor activity
CJF63_RS06610	COG1380	Effector of murein hydrolase LrgA
CJF63_RS06615	COG1346	cytolysis
CJF63_RS06640	COG3409	Peptidoglycan-binding domain 1 protein
CJF63_RS06640	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS06655	COG1132	(ABC) transporter
CJF63_RS06660	COG1132	(ABC) transporter
CJF63_RS06700	COG3639	organic phosphonate transmembrane transporter activity
CJF63_RS06705	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CJF63_RS06725	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CJF63_RS06745	COG1695	Transcriptional regulator
CJF63_RS06790	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS06790	COG3409	Peptidoglycan-binding domain 1 protein
CJF63_RS06790	COG1388	LysM domain
CJF63_RS06795	COG4824	toxin secretion phage lysis holin
CJF63_RS06955	COG1595	DNA-templated transcription, initiation
CJF63_RS07000	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
CJF63_RS07090	COG1396	sequence-specific DNA binding
CJF63_RS07115	COG0174	glutamine synthetase
CJF63_RS07120	COG0789	Transcriptional regulator
CJF63_RS07125	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CJF63_RS07135	COG2860	membrane
CJF63_RS07145	COG0464	growth
CJF63_RS07175	COG3584	3D domain protein
CJF63_RS07175	COG1388	LysM domain
CJF63_RS07185	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJF63_RS07185	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJF63_RS07185	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJF63_RS07190	COG1105	Belongs to the carbohydrate kinase PfkB family
CJF63_RS07195	COG1349	DNA-binding transcription factor activity
CJF63_RS07205	COG2322	membrane
CJF63_RS07220	COG1113	amino acid transport
CJF63_RS07235	COG1408	metallophosphoesterase
CJF63_RS07240	COG2116	formate transmembrane transporter activity
CJF63_RS07255	COG2217	Heavy metal translocating P-type atpase
CJF63_RS07260	COG2608	mercury ion transmembrane transporter activity
CJF63_RS07265	COG1937	Protein conserved in bacteria
CJF63_RS07275	COG2819	hydrolase of the alpha beta superfamily
CJF63_RS07280	COG1120	ATPase activity
CJF63_RS07285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS07290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS07300	COG0708	Exodeoxyribonuclease III
CJF63_RS07305	COG2169	Transcriptional regulator
CJF63_RS07310	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJF63_RS07315	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CJF63_RS07325	COG2364	Membrane
CJF63_RS07340	COG2267	carboxylic ester hydrolase activity
CJF63_RS07345	COG0346	lactoylglutathione lyase activity
CJF63_RS07350	COG3300	MHYT domain
CJF63_RS07350	COG5001	Diguanylate cyclase
CJF63_RS07370	COG1346	cytolysis
CJF63_RS07375	COG1380	Effector of murein hydrolase LrgA
CJF63_RS07380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS07385	COG0596	Alpha beta hydrolase
CJF63_RS07385	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJF63_RS07390	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CJF63_RS07410	COG1404	Belongs to the peptidase S8 family
CJF63_RS07415	COG3773	Cell wall hydrolase
CJF63_RS07420	COG0562	UDP-galactopyranose mutase
CJF63_RS07425	COG1368	sulfuric ester hydrolase activity
CJF63_RS07430	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJF63_RS07440	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CJF63_RS07465	COG1131	(ABC) transporter
CJF63_RS07485	COG4550	Control of competence regulator ComK, YlbF/YmcA
CJF63_RS07490	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CJF63_RS07495	COG1013	pyruvate-flavodoxin oxidoreductase activity
CJF63_RS07500	COG0674	pyruvate-flavodoxin oxidoreductase activity
CJF63_RS07500	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CJF63_RS07510	COG2359	stage V sporulation protein S
CJF63_RS07515	COG1692	metallophosphoesterase
CJF63_RS07540	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CJF63_RS07545	COG1426	Protein conserved in bacteria
CJF63_RS07560	COG0300	oxidoreductase activity
CJF63_RS07565	COG0612	Peptidase, M16
CJF63_RS07570	COG0612	Peptidase, M16
CJF63_RS07585	COG3845	ABC transporter
CJF63_RS07590	COG1744	ABC transporter substrate-binding protein PnrA-like
CJF63_RS07595	COG2188	Transcriptional regulator
CJF63_RS07600	COG1674	ftsk spoiiie
CJF63_RS07610	COG0740	serine-type endopeptidase activity
CJF63_RS07615	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJF63_RS07630	COG0527	aspartate kinase activity
CJF63_RS07635	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJF63_RS07640	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJF63_RS07645	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJF63_RS07655	COG1873	PFAM PRC-barrel domain
CJF63_RS07660	COG0612	Peptidase, M16
CJF63_RS07665	COG0726	polysaccharide deacetylase
CJF63_RS07680	COG0196	riboflavin kinase activity
CJF63_RS07685	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CJF63_RS07695	COG1550	Protein conserved in bacteria
CJF63_RS07705	COG1358	cellular component organization or biogenesis
CJF63_RS07710	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CJF63_RS07715	COG0195	Participates in both transcription termination and antitermination
CJF63_RS07740	COG0750	zinc metalloprotease
CJF63_RS07750	COG4589	Belongs to the CDS family
CJF63_RS07755	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CJF63_RS07765	COG0528	UMP kinase activity
CJF63_RS07795	COG4974	Belongs to the 'phage' integrase family
CJF63_RS07805	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJF63_RS07815	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CJF63_RS07855	COG1837	Belongs to the UPF0109 family
CJF63_RS07865	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CJF63_RS07875	COG0552	protein localization to endoplasmic reticulum
CJF63_RS07880	COG1196	nuclear chromosome segregation
CJF63_RS07890	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJF63_RS07895	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS07900	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJF63_RS07915	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CJF63_RS07920	COG1461	Dihydroxyacetone kinase
CJF63_RS07925	COG1302	Protein conserved in bacteria
CJF63_RS07940	COG1564	THIamine pyrophosphokinase
CJF63_RS07945	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CJF63_RS07950	COG1162	GTPase activity
CJF63_RS07955	COG0515	serine threonine protein kinase
CJF63_RS07955	COG2815	serine threonine protein kinase
CJF63_RS07960	COG0631	protein serine/threonine phosphatase activity
CJF63_RS07970	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CJF63_RS07970	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CJF63_RS07980	COG0242	peptide deformylase activity
CJF63_RS07985	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CJF63_RS07990	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJF63_RS08010	COG1561	YicC-like family, N-terminal region
CJF63_RS08015	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CJF63_RS08025	COG0006	proline dipeptidase activity
CJF63_RS08045	COG3069	C4-dicarboxylate transmembrane transporter activity
CJF63_RS08110	COG0564	pseudouridine synthase activity
CJF63_RS08130	COG3599	regulation of cell shape
CJF63_RS08135	COG2302	S4 RNA-binding domain
CJF63_RS08140	COG0762	integral membrane protein
CJF63_RS08150	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CJF63_RS08155	COG1496	oxidoreductase activity
CJF63_RS08160	COG1873	PFAM PRC-barrel domain
CJF63_RS08165	COG1191	sigma factor activity
CJF63_RS08170	COG1191	sigma factor activity
CJF63_RS08180	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CJF63_RS08185	COG0849	cell division
CJF63_RS08190	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CJF63_RS08195	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CJF63_RS08205	COG0772	Belongs to the SEDS family
CJF63_RS08220	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CJF63_RS08225	COG0768	penicillin binding
CJF63_RS08230	COG0768	penicillin binding
CJF63_RS08235	COG4839	cell division protein FtsL
CJF63_RS08250	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJF63_RS08265	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CJF63_RS08270	COG1399	metal-binding, possibly nucleic acid-binding protein
CJF63_RS08320	COG4824	toxin secretion phage lysis holin
CJF63_RS08410	COG1802	Transcriptional regulator
CJF63_RS08410	COG4626	Terminase
CJF63_RS08440	COG0582	viral genome integration into host DNA
CJF63_RS08515	COG0756	dUTP diphosphatase activity
CJF63_RS08530	COG1191	sigma factor activity
CJF63_RS08555	COG1484	DNA-dependent DNA replication
CJF63_RS08585	COG1396	sequence-specific DNA binding
CJF63_RS08600	COG1396	sequence-specific DNA binding
CJF63_RS08620	COG0582	viral genome integration into host DNA
CJF63_RS08630	COG3480	Lon protease (S16) C-terminal proteolytic domain
CJF63_RS08635	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJF63_RS08640	COG3314	Sporulation integral membrane protein YlbJ
CJF63_RS08650	COG0742	ribosomal rna small subunit methyltransferase
CJF63_RS08665	COG3679	Belongs to the UPF0342 family
CJF63_RS08670	COG0406	alpha-ribazole phosphatase activity
CJF63_RS08685	COG2340	Cysteine-rich secretory protein family
CJF63_RS08700	COG3336	cytochrome c oxidase
CJF63_RS08735	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CJF63_RS08745	COG0772	Belongs to the SEDS family
CJF63_RS08755	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CJF63_RS08760	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CJF63_RS08770	COG4896	Protein conserved in bacteria
CJF63_RS08785	COG1217	gtp-binding protein TYPA
CJF63_RS08795	COG0483	inositol monophosphate 1-phosphatase activity
CJF63_RS08815	COG1982	Orn Lys Arg decarboxylase major
CJF63_RS08860	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJF63_RS08865	COG0022	dehydrogenase e1 component
CJF63_RS08870	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJF63_RS08880	COG0242	peptide deformylase activity
CJF63_RS08885	COG0561	phosphatase activity
CJF63_RS08900	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJF63_RS08905	COG0569	domain protein
CJF63_RS08925	COG0583	DNA-binding transcription factor activity
CJF63_RS08930	COG0517	IMP dehydrogenase activity
CJF63_RS08940	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CJF63_RS08950	COG4703	Protein of unknown function (DUF1797)
CJF63_RS08965	COG2200	EAL domain
CJF63_RS08970	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS08975	COG1408	metallophosphoesterase
CJF63_RS08990	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CJF63_RS09030	COG2814	Major facilitator Superfamily
CJF63_RS09050	COG3209	COG3209 Rhs family protein
CJF63_RS09065	COG2205	protein histidine kinase activity
CJF63_RS09075	COG0436	Aminotransferase
CJF63_RS09080	COG1609	Transcriptional regulator
CJF63_RS09085	COG3833	ABC-type maltose transport systems, permease component
CJF63_RS09090	COG1175	transmembrane transport
CJF63_RS09095	COG2182	Extracellular solute-binding protein
CJF63_RS09105	COG0366	Alpha amylase catalytic
CJF63_RS09110	COG3842	ATPase activity
CJF63_RS09150	COG0183	Belongs to the thiolase family
CJF63_RS09190	COG1695	Transcriptional regulator
CJF63_RS09195	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS09205	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CJF63_RS09215	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJF63_RS09220	COG0436	Aminotransferase
CJF63_RS09240	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CJF63_RS09265	COG2199	diguanylate cyclase activity
CJF63_RS09270	COG0778	Nitroreductase
CJF63_RS09295	COG2190	(PTS) system
CJF63_RS09295	COG1263	PTS System
CJF63_RS09295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS09300	COG3711	transcriptional antiterminator
CJF63_RS09310	COG2188	Transcriptional regulator
CJF63_RS09320	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CJF63_RS09350	COG1547	Domain of unknown function (DUF309)
CJF63_RS09355	COG0456	acetyltransferase
CJF63_RS09365	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJF63_RS09370	COG4086	secreted protein
CJF63_RS09375	COG0561	phosphatase activity
CJF63_RS09380	COG0697	spore germination
CJF63_RS09395	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS09420	COG0733	neurotransmitter:sodium symporter activity
CJF63_RS09440	COG1686	Belongs to the peptidase S11 family
CJF63_RS09450	COG1725	Transcriptional regulator
CJF63_RS09455	COG1131	(ABC) transporter
CJF63_RS09475	COG1846	Transcriptional regulator
CJF63_RS09490	COG0598	Magnesium transport protein CorA
CJF63_RS09515	COG4974	Belongs to the 'phage' integrase family
CJF63_RS09525	COG0735	belongs to the Fur family
CJF63_RS09530	COG1300	Membrane
CJF63_RS09550	COG0667	Aldo Keto reductase
CJF63_RS09555	COG0656	L-ascorbic acid biosynthetic process
CJF63_RS09560	COG0456	acetyltransferase
CJF63_RS09560	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJF63_RS09570	COG4085	toxin activity
CJF63_RS09570	COG1525	nuclease
CJF63_RS09570	COG0737	Belongs to the 5'-nucleotidase family
CJF63_RS09580	COG0596	Alpha beta hydrolase
CJF63_RS09585	COG2056	Na+-H+ antiporter family
CJF63_RS09590	COG1609	Transcriptional regulator
CJF63_RS09595	COG0456	acetyltransferase
CJF63_RS09600	COG1073	alpha beta
CJF63_RS09615	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJF63_RS09615	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJF63_RS09620	COG0307	riboflavin synthase, alpha
CJF63_RS09645	COG4106	trans-aconitate 2-methyltransferase activity
CJF63_RS09650	COG2226	methyltransferase
CJF63_RS09650	COG1073	alpha beta
CJF63_RS09665	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJF63_RS09680	COG1757	Na H antiporter
CJF63_RS09685	COG0737	Belongs to the 5'-nucleotidase family
CJF63_RS09695	COG1522	sequence-specific DNA binding
CJF63_RS09715	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJF63_RS09725	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CJF63_RS09740	COG0300	oxidoreductase activity
CJF63_RS09750	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJF63_RS09755	COG1760	l-serine dehydratase
CJF63_RS09760	COG1760	l-serine dehydratase
CJF63_RS09785	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJF63_RS09795	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJF63_RS09800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS09815	COG1376	ErfK ybiS ycfS ynhG family protein
CJF63_RS09820	COG4129	membrane
CJF63_RS09825	COG1126	abc transporter atp-binding protein
CJF63_RS09830	COG0765	amino acid transport
CJF63_RS09835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJF63_RS09855	COG2816	NAD+ diphosphatase activity
CJF63_RS09860	COG0772	Belongs to the SEDS family
CJF63_RS09870	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJF63_RS09875	COG0022	dehydrogenase e1 component
CJF63_RS09880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJF63_RS09885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJF63_RS09900	COG0280	phosphate acetyltransferase
CJF63_RS09910	COG3829	transcription factor binding
CJF63_RS09910	COG3290	protein histidine kinase activity
CJF63_RS09920	COG0584	glycerophosphoryl diester phosphodiesterase
CJF63_RS09925	COG3093	addiction module antidote protein HigA
CJF63_RS09935	COG0745	RESPONSE REGULATOR receiver
CJF63_RS09945	COG0750	zinc metalloprotease
CJF63_RS09950	COG0497	DNA recombination
CJF63_RS09960	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CJF63_RS09970	COG0142	geranyltranstransferase activity
CJF63_RS09995	COG1302	Protein conserved in bacteria
CJF63_RS10000	COG0439	Biotin carboxylase
CJF63_RS10005	COG0511	ligase activity, forming carbon-carbon bonds
CJF63_RS10050	COG3854	ATPases associated with a variety of cellular activities
CJF63_RS10075	COG0006	proline dipeptidase activity
CJF63_RS10090	COG3872	metal-dependent enzyme
CJF63_RS10100	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJF63_RS10120	COG0095	Lipoate-protein ligase
CJF63_RS10125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS10130	COG1609	Transcriptional regulator
CJF63_RS10140	COG2076	Multidrug Resistance protein
CJF63_RS10145	COG2076	Multidrug Resistance protein
CJF63_RS10190	COG1131	(ABC) transporter
CJF63_RS10195	COG1725	Transcriptional regulator
CJF63_RS10230	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJF63_RS10290	COG4970	Tfp pilus assembly protein FimT
CJF63_RS10300	COG1459	type II secretion system
CJF63_RS10305	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJF63_RS10355	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CJF63_RS10360	COG0646	methionine synthase
CJF63_RS10360	COG1410	methionine synthase
CJF63_RS10365	COG0646	methionine synthase
CJF63_RS10365	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CJF63_RS10370	COG0626	cystathionine gamma-synthase activity
CJF63_RS10375	COG0626	cystathionine gamma-synthase activity
CJF63_RS10395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS10405	COG1940	carbohydrate kinase activity
CJF63_RS10410	COG4483	Protein conserved in bacteria
CJF63_RS10415	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CJF63_RS10420	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CJF63_RS10425	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CJF63_RS10430	COG0704	Plays a role in the regulation of phosphate uptake
CJF63_RS10440	COG0581	inorganic phosphate transmembrane transporter activity
CJF63_RS10445	COG0573	inorganic phosphate transmembrane transporter activity
CJF63_RS10450	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJF63_RS10455	COG0768	penicillin binding
CJF63_RS10460	COG0477	Major facilitator Superfamily
CJF63_RS10465	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJF63_RS10490	COG0735	belongs to the Fur family
CJF63_RS10495	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJF63_RS10500	COG1121	(ABC) transporter
CJF63_RS10505	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS10535	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CJF63_RS10540	COG2384	SAM-dependent methyltransferase
CJF63_RS10545	COG2010	Cytochrome c
CJF63_RS10550	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJF63_RS10555	COG0358	DNA primase activity
CJF63_RS10580	COG0517	IMP dehydrogenase activity
CJF63_RS10595	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CJF63_RS10600	COG0295	cytidine deaminase activity
CJF63_RS10605	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CJF63_RS10615	COG1480	7TM receptor with intracellular HD hydrolase
CJF63_RS10620	COG1702	phosphate starvation-inducible protein PhoH
CJF63_RS10640	COG1610	YqeY-like protein
CJF63_RS10645	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CJF63_RS10655	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CJF63_RS10660	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CJF63_RS10690	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJF63_RS10695	COG1733	regulation of RNA biosynthetic process
CJF63_RS10720	COG1466	dna polymerase III delta subunit
CJF63_RS10730	COG2333	competence protein COMEC
CJF63_RS10730	COG0658	competence protein
CJF63_RS10735	COG2131	deaminase
CJF63_RS10740	COG1596	polysaccharide export
CJF63_RS10740	COG1555	photosystem II stabilization
CJF63_RS10745	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJF63_RS10750	COG2226	methyltransferase
CJF63_RS10755	COG0799	negative regulation of ribosome biogenesis
CJF63_RS10770	COG1534	Rna-binding protein
CJF63_RS10780	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CJF63_RS10785	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CJF63_RS10815	COG1595	DNA-templated transcription, initiation
CJF63_RS10825	COG0778	Nitroreductase
CJF63_RS10830	COG2357	RelA SpoT domain protein
CJF63_RS10840	COG1785	Belongs to the alkaline phosphatase family
CJF63_RS10850	COG2267	carboxylic ester hydrolase activity
CJF63_RS10885	COG1404	Belongs to the peptidase S8 family
CJF63_RS10890	COG3186	Phenylalanine-4-hydroxylase
CJF63_RS10905	COG2259	Doxx family
CJF63_RS10945	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS10960	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS10960	COG1454	alcohol dehydrogenase
CJF63_RS10965	COG0626	cystathionine gamma-synthase activity
CJF63_RS10970	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJF63_RS10995	COG0768	penicillin binding
CJF63_RS11010	COG0826	peptidase U32
CJF63_RS11015	COG0826	peptidase U32
CJF63_RS11020	COG4122	O-methyltransferase activity
CJF63_RS11025	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CJF63_RS11045	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJF63_RS11055	COG0628	permease
CJF63_RS11075	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CJF63_RS11085	COG0482	sulfurtransferase activity
CJF63_RS11090	COG1104	cysteine desulfurase activity
CJF63_RS11095	COG1959	2 iron, 2 sulfur cluster binding
CJF63_RS11100	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CJF63_RS11110	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CJF63_RS11140	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJF63_RS11150	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CJF63_RS11150	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CJF63_RS11155	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CJF63_RS11160	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJF63_RS11160	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJF63_RS11170	COG2244	polysaccharide biosynthetic process
CJF63_RS11175	COG2323	membrane
CJF63_RS11185	COG1862	Preprotein translocase
CJF63_RS11215	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CJF63_RS11225	COG0697	spore germination
CJF63_RS11230	COG0697	spore germination
CJF63_RS11235	COG0640	Transcriptional regulator
CJF63_RS11260	COG0157	Belongs to the NadC ModD family
CJF63_RS11265	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CJF63_RS11270	COG1104	cysteine desulfurase activity
CJF63_RS11275	COG1827	regulation of RNA biosynthetic process
CJF63_RS11280	COG2258	MOSC domain
CJF63_RS11285	COG0077	Prephenate dehydratase
CJF63_RS11290	COG0577	efflux transmembrane transporter activity
CJF63_RS11295	COG0577	efflux transmembrane transporter activity
CJF63_RS11300	COG1136	(ABC) transporter
CJF63_RS11310	COG0745	RESPONSE REGULATOR receiver
CJF63_RS11315	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CJF63_RS11320	COG3290	protein histidine kinase activity
CJF63_RS11330	COG2868	ribosomal protein
CJF63_RS11340	COG1530	ribonuclease E activity
CJF63_RS11345	COG1994	Peptidase M50
CJF63_RS11350	COG0739	heme binding
CJF63_RS11355	COG2894	cell division
CJF63_RS11375	COG1077	Cell shape determining protein MreB Mrl
CJF63_RS11400	COG0285	dihydrofolate synthase activity
CJF63_RS11405	COG0525	valine-tRNA ligase activity
CJF63_RS11415	COG1388	LysM domain
CJF63_RS11425	COG0113	porphobilinogen synthase activity
CJF63_RS11430	COG1587	Uroporphyrinogen-III synthase
CJF63_RS11440	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJF63_RS11450	COG1846	Transcriptional regulator
CJF63_RS11455	COG1764	response to oxidative stress
CJF63_RS11470	COG1067	ATP-dependent peptidase activity
CJF63_RS11470	COG0470	DNA polymerase III
CJF63_RS11525	COG0622	Phosphoesterase
CJF63_RS11540	COG5401	PFAM Sporulation and spore germination
CJF63_RS11560	COG1309	transcriptional regulator
CJF63_RS11575	COG2197	response regulator
CJF63_RS11580	COG2233	PERMEase
CJF63_RS11590	COG0402	S-adenosylhomocysteine deaminase activity
CJF63_RS11595	COG0402	S-adenosylhomocysteine deaminase activity
CJF63_RS11605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJF63_RS11615	COG0444	Belongs to the ABC transporter superfamily
CJF63_RS11620	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS11630	COG3279	Response regulator of the LytR AlgR family
CJF63_RS11650	COG1396	sequence-specific DNA binding
CJF63_RS11655	COG0697	spore germination
CJF63_RS11665	COG1959	2 iron, 2 sulfur cluster binding
CJF63_RS11670	COG1668	transmembrane transport
CJF63_RS11675	COG4152	abc transporter atp-binding protein
CJF63_RS11680	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CJF63_RS11690	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJF63_RS11695	COG1876	peptidase activity
CJF63_RS11700	COG0824	Thioesterase
CJF63_RS11705	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CJF63_RS11710	COG1053	succinate dehydrogenase
CJF63_RS11715	COG2009	succinate dehydrogenase
CJF63_RS11720	COG1719	4-vinyl reductase, 4VR
CJF63_RS11730	COG3118	belongs to the thioredoxin family
CJF63_RS11735	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CJF63_RS11740	COG2086	electron transfer activity
CJF63_RS11745	COG1024	Enoyl-CoA hydratase
CJF63_RS11750	COG1309	transcriptional regulator
CJF63_RS11755	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS11780	COG2318	DinB family
CJF63_RS11810	COG1131	(ABC) transporter
CJF63_RS11815	COG2205	protein histidine kinase activity
CJF63_RS11820	COG0745	RESPONSE REGULATOR receiver
CJF63_RS11830	COG4895	conserved protein (DUF2196)
CJF63_RS11835	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CJF63_RS11850	COG4509	Sortase family
CJF63_RS11855	COG1120	ATPase activity
CJF63_RS11870	COG5386	Cell surface protein
CJF63_RS11880	COG5386	Cell surface protein
CJF63_RS11885	COG1114	Component of the transport system for branched-chain amino acids
CJF63_RS11890	COG1187	pseudouridine synthase activity
CJF63_RS11905	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CJF63_RS11905	COG1796	DNA polymerase
CJF63_RS11910	COG1286	toxin biosynthetic process
CJF63_RS11955	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJF63_RS11965	COG1418	mRNA catabolic process
CJF63_RS11990	COG2814	Major facilitator Superfamily
CJF63_RS11995	COG1566	PFAM secretion protein HlyD family protein
CJF63_RS12000	COG1309	transcriptional regulator
CJF63_RS12005	COG1363	Peptidase, m42
CJF63_RS12030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJF63_RS12040	COG1484	DNA-dependent DNA replication
CJF63_RS12045	COG3611	Membrane attachment protein
CJF63_RS12055	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CJF63_RS12065	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJF63_RS12070	COG0237	dephospho-CoA kinase activity
CJF63_RS12075	COG1971	Probably functions as a manganese efflux pump
CJF63_RS12085	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJF63_RS12085	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJF63_RS12090	COG5002	protein histidine kinase activity
CJF63_RS12095	COG0745	RESPONSE REGULATOR receiver
CJF63_RS12120	COG0538	isocitrate dehydrogenase activity
CJF63_RS12125	COG0372	Belongs to the citrate synthase family
CJF63_RS12140	COG0628	permease
CJF63_RS12145	COG3030	protein affecting phage T7 exclusion by the F plasmid
CJF63_RS12170	COG1725	Transcriptional regulator
CJF63_RS12175	COG0281	malic enzyme
CJF63_RS12180	COG0587	DNA-directed DNA polymerase activity
CJF63_RS12195	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CJF63_RS12220	COG4109	DRTGG domain
CJF63_RS12235	COG0006	proline dipeptidase activity
CJF63_RS12275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS12280	COG0662	Cupin 2, conserved barrel domain protein
CJF63_RS12290	COG1476	TRANSCRIPTIONal
CJF63_RS12305	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS12310	COG0589	response to stress
CJF63_RS12360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS12380	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CJF63_RS12385	COG0827	DNA restriction-modification system
CJF63_RS12390	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CJF63_RS12395	COG3874	Sporulation protein YtfJ
CJF63_RS12410	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CJF63_RS12420	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJF63_RS12435	COG1104	cysteine desulfurase activity
CJF63_RS12445	COG0583	DNA-binding transcription factor activity
CJF63_RS12450	COG0697	spore germination
CJF63_RS12460	COG1956	GAF domain-containing protein
CJF63_RS12465	COG0626	cystathionine gamma-synthase activity
CJF63_RS12500	COG1595	DNA-templated transcription, initiation
CJF63_RS12510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJF63_RS12515	COG0454	-acetyltransferase
CJF63_RS12520	COG0517	IMP dehydrogenase activity
CJF63_RS12525	COG0123	including yeast histone deacetylase and acetoin utilization protein
CJF63_RS12535	COG0745	RESPONSE REGULATOR receiver
CJF63_RS12545	COG0666	response to abiotic stimulus
CJF63_RS12580	COG1609	Transcriptional regulator
CJF63_RS12590	COG4851	CamS sex pheromone cAM373 precursor
CJF63_RS12595	COG3118	belongs to the thioredoxin family
CJF63_RS12605	COG2309	aminopeptidase activity
CJF63_RS12625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS12640	COG1674	ftsk spoiiie
CJF63_RS12650	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJF63_RS12655	COG4848	Belongs to the UPF0354 family
CJF63_RS12660	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJF63_RS12665	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CJF63_RS12670	COG1363	Peptidase, m42
CJF63_RS12680	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS12695	COG0510	thiamine kinase activity
CJF63_RS12700	COG1523	belongs to the glycosyl hydrolase 13 family
CJF63_RS12720	COG1349	DNA-binding transcription factor activity
CJF63_RS12725	COG1187	pseudouridine synthase activity
CJF63_RS12730	COG2244	polysaccharide biosynthetic process
CJF63_RS12735	COG2081	HI0933 family
CJF63_RS12745	COG2814	Major facilitator Superfamily
CJF63_RS12755	COG3832	glyoxalase III activity
CJF63_RS12780	COG1329	Transcriptional regulator
CJF63_RS12790	COG4975	Glucose uptake
CJF63_RS12805	COG0314	molybdopterin synthase activity
CJF63_RS12810	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJF63_RS12815	COG0303	'Molybdopterin
CJF63_RS12825	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJF63_RS12850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS12860	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJF63_RS12905	COG2814	Major facilitator Superfamily
CJF63_RS12910	COG0475	glutathione-regulated potassium exporter activity
CJF63_RS12915	COG0490	domain, Protein
CJF63_RS12920	COG0582	viral genome integration into host DNA
CJF63_RS12930	COG1136	(ABC) transporter
CJF63_RS12950	COG1242	4 iron, 4 sulfur cluster binding
CJF63_RS12955	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CJF63_RS12960	COG1131	(ABC) transporter
CJF63_RS12970	COG1794	racemase activity, acting on amino acids and derivatives
CJF63_RS12990	COG2267	carboxylic ester hydrolase activity
CJF63_RS12995	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CJF63_RS13000	COG0671	phosphoesterase, PA-phosphatase related
CJF63_RS13005	COG0438	transferase activity, transferring glycosyl groups
CJF63_RS13015	COG0521	Mo-molybdopterin cofactor biosynthetic process
CJF63_RS13075	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CJF63_RS13080	COG5002	protein histidine kinase activity
CJF63_RS13085	COG4191	Histidine kinase
CJF63_RS13090	COG2267	carboxylic ester hydrolase activity
CJF63_RS13095	COG1368	sulfuric ester hydrolase activity
CJF63_RS13115	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJF63_RS13120	COG1116	anion transmembrane transporter activity
CJF63_RS13125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJF63_RS13150	COG0494	nUDIX hydrolase
CJF63_RS13185	COG0288	reversible hydration of carbon dioxide
CJF63_RS13190	COG1271	oxidase subunit
CJF63_RS13195	COG1294	oxidase, subunit
CJF63_RS13220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS13245	COG1842	Phage shock protein A
CJF63_RS13280	COG5002	protein histidine kinase activity
CJF63_RS13285	COG0745	RESPONSE REGULATOR receiver
CJF63_RS13315	COG1597	lipid kinase activity
CJF63_RS13355	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS13365	COG0577	efflux transmembrane transporter activity
CJF63_RS13370	COG1136	(ABC) transporter
CJF63_RS13375	COG2207	Transcriptional regulator
CJF63_RS13375	COG3708	Transcriptional regulator
CJF63_RS13380	COG0745	RESPONSE REGULATOR receiver
CJF63_RS13385	COG2205	protein histidine kinase activity
CJF63_RS13395	COG0577	efflux transmembrane transporter activity
CJF63_RS13400	COG1136	(ABC) transporter
CJF63_RS13420	COG2188	Transcriptional regulator
CJF63_RS13440	COG3964	amidohydrolase
CJF63_RS13470	COG4948	Mandelate Racemase Muconate Lactonizing
CJF63_RS13485	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CJF63_RS13490	COG0596	Alpha beta hydrolase
CJF63_RS13495	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CJF63_RS13500	COG1169	isochorismate synthase
CJF63_RS13505	COG1575	Belongs to the MenA family. Type 1 subfamily
CJF63_RS13510	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJF63_RS13535	COG0058	SHG alpha-glucan phosphorylase activity
CJF63_RS13540	COG0297	glycogen (starch) synthase activity
CJF63_RS13545	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CJF63_RS13675	COG0544	peptidyl-prolyl cis-trans isomerase activity
CJF63_RS13720	COG1285	pathogenesis
CJF63_RS13725	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CJF63_RS13735	COG0166	Belongs to the GPI family
CJF63_RS13745	COG2155	Conserved Protein
CJF63_RS13750	COG1098	S1 RNA binding domain
CJF63_RS13755	COG0436	Aminotransferase
CJF63_RS13760	COG1522	sequence-specific DNA binding
CJF63_RS13765	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJF63_RS13770	COG2267	carboxylic ester hydrolase activity
CJF63_RS13780	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CJF63_RS13795	COG5018	Exonuclease
CJF63_RS13800	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJF63_RS13825	COG2050	protein possibly involved in aromatic compounds catabolism
CJF63_RS13835	COG1268	BioY protein
CJF63_RS13845	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CJF63_RS13850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CJF63_RS13865	COG3584	3D domain protein
CJF63_RS13880	COG1252	NADH dehydrogenase
CJF63_RS13895	COG3708	Transcriptional regulator
CJF63_RS13910	COG1683	Conserved Protein
CJF63_RS13930	COG0316	Belongs to the HesB IscA family
CJF63_RS13945	COG1252	NADH dehydrogenase
CJF63_RS13960	COG0390	transport system, permease component
CJF63_RS13965	COG2824	Alkylphosphonate utilization operon protein PhnA
CJF63_RS14005	COG4837	Protein of unknown function (DUF1462)
CJF63_RS14010	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CJF63_RS14020	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJF63_RS14025	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CJF63_RS14035	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJF63_RS14040	COG0647	UMP catabolic process
CJF63_RS14050	COG2445	Protein of unknown function DUF86
CJF63_RS14055	COG1494	fructose-1,6-bisphosphatase
CJF63_RS14075	COG4470	Protein conserved in bacteria
CJF63_RS14085	COG0789	Transcriptional regulator
CJF63_RS14090	COG4377	Putative membrane peptidase family (DUF2324)
CJF63_RS14115	COG0739	heme binding
CJF63_RS14125	COG3377	Domain of unknown function (DUF1805)
CJF63_RS14130	COG0737	Belongs to the 5'-nucleotidase family
CJF63_RS14145	COG1695	Transcriptional regulator
CJF63_RS14160	COG0719	Fe-S assembly protein
CJF63_RS14165	COG0822	iron-sulfur transferase activity
CJF63_RS14170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJF63_RS14175	COG0719	Fe-S assembly protein
CJF63_RS14180	COG0396	ATPase activity
CJF63_RS14185	COG1464	Belongs to the NlpA lipoprotein family
CJF63_RS14190	COG1464	Belongs to the NlpA lipoprotein family
CJF63_RS14195	COG2011	ABC-type metal ion transport system permease component
CJF63_RS14200	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJF63_RS14215	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJF63_RS14220	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CJF63_RS14235	COG1393	Belongs to the ArsC family
CJF63_RS14290	COG0039	L-malate dehydrogenase activity
CJF63_RS14315	COG1309	transcriptional regulator
CJF63_RS14320	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS14325	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS14335	COG0183	Belongs to the thiolase family
CJF63_RS14340	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJF63_RS14340	COG1024	Enoyl-CoA hydratase
CJF63_RS14355	COG1686	Belongs to the peptidase S11 family
CJF63_RS14370	COG0011	TIGRFAM Protein of
CJF63_RS14375	COG0840	transmembrane signaling receptor activity
CJF63_RS14395	COG2814	Major facilitator Superfamily
CJF63_RS14400	COG0531	amino acid
CJF63_RS14410	COG0706	membrane insertase activity
CJF63_RS14420	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS14460	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS14470	COG1376	ErfK ybiS ycfS ynhG family protein
CJF63_RS14475	COG0745	RESPONSE REGULATOR receiver
CJF63_RS14480	COG5002	protein histidine kinase activity
CJF63_RS14505	COG2151	metal-sulfur cluster biosynthetic enzyme
CJF63_RS14510	COG3227	Zinc metalloprotease (Elastase)
CJF63_RS14515	COG1741	Belongs to the pirin family
CJF63_RS14530	COG0475	glutathione-regulated potassium exporter activity
CJF63_RS14535	COG0490	domain, Protein
CJF63_RS14545	COG1115	amino acid carrier protein
CJF63_RS14550	COG0783	Belongs to the Dps family
CJF63_RS14565	COG1611	Belongs to the LOG family
CJF63_RS14590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS14595	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS14600	COG1115	amino acid carrier protein
CJF63_RS14605	COG1115	amino acid carrier protein
CJF63_RS14610	COG2910	NAD(P)H-binding
CJF63_RS14640	COG0656	L-ascorbic acid biosynthetic process
CJF63_RS14645	COG2814	Major facilitator Superfamily
CJF63_RS14650	COG1733	regulation of RNA biosynthetic process
CJF63_RS14660	COG1252	NADH dehydrogenase
CJF63_RS14665	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CJF63_RS14670	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CJF63_RS14680	COG3290	protein histidine kinase activity
CJF63_RS14680	COG0840	transmembrane signaling receptor activity
CJF63_RS14690	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CJF63_RS14695	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CJF63_RS14710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS14770	COG0557	exoribonuclease II activity
CJF63_RS14775	COG1647	Serine aminopeptidase, S33
CJF63_RS14780	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJF63_RS14785	COG1346	cytolysis
CJF63_RS14895	COG4695	Portal protein
CJF63_RS14920	COG4974	Belongs to the 'phage' integrase family
CJF63_RS14930	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CJF63_RS14935	COG0149	triose-phosphate isomerase activity
CJF63_RS14945	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJF63_RS14960	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CJF63_RS14985	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS15000	COG2323	membrane
CJF63_RS15005	COG0740	serine-type endopeptidase activity
CJF63_RS15010	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJF63_RS15020	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CJF63_RS15030	COG1051	belongs to the nudix hydrolase family
CJF63_RS15040	COG0492	ferredoxin-NADP+ reductase activity
CJF63_RS15045	COG0457	Tetratricopeptide repeat
CJF63_RS15050	COG0110	maltose O-acetyltransferase activity
CJF63_RS15070	COG1950	PFAM Membrane protein of
CJF63_RS15080	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJF63_RS15085	COG0556	nucleotide-excision repair
CJF63_RS15105	COG0789	Transcriptional regulator
CJF63_RS15135	COG0583	DNA-binding transcription factor activity
CJF63_RS15145	COG0655	NAD(P)H dehydrogenase (quinone) activity
CJF63_RS15150	COG0488	(ABC) transporter
CJF63_RS15160	COG1132	(ABC) transporter
CJF63_RS15170	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJF63_RS15175	COG3409	Peptidoglycan-binding domain 1 protein
CJF63_RS15175	COG0793	Belongs to the peptidase S41A family
CJF63_RS15180	COG2177	Part of the ABC transporter FtsEX involved in
CJF63_RS15185	COG2884	Cell division ATP-binding protein ftsE
CJF63_RS15200	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CJF63_RS15210	COG0653	protein targeting
CJF63_RS15215	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJF63_RS15220	COG1278	Cold shock
CJF63_RS15225	COG1040	competence protein
CJF63_RS15230	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CJF63_RS15235	COG1388	LysM domain
CJF63_RS15235	COG0791	NLP P60 protein
CJF63_RS15240	COG1733	regulation of RNA biosynthetic process
CJF63_RS15250	COG1307	EDD domain protein, DegV family
CJF63_RS15255	COG1739	Uncharacterized protein family UPF0029
CJF63_RS15260	COG1316	TRANSCRIPTIONal
CJF63_RS15265	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CJF63_RS15270	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CJF63_RS15275	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJF63_RS15285	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CJF63_RS15285	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CJF63_RS15300	COG3394	polysaccharide catabolic process
CJF63_RS15305	COG1486	melibiose metabolic process
CJF63_RS15310	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJF63_RS15315	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJF63_RS15325	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CJF63_RS15330	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CJF63_RS15335	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJF63_RS15345	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJF63_RS15350	COG1301	dicarboxylic acid transport
CJF63_RS15360	COG0346	lactoylglutathione lyase activity
CJF63_RS15365	COG1511	domain protein
CJF63_RS15370	COG0583	DNA-binding transcription factor activity
CJF63_RS15375	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CJF63_RS15395	COG1271	oxidase subunit
CJF63_RS15400	COG1294	oxidase, subunit
CJF63_RS15405	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJF63_RS15415	COG1620	l-lactate permease
CJF63_RS15425	COG2389	metal-binding protein
CJF63_RS15440	COG1368	sulfuric ester hydrolase activity
CJF63_RS15460	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS15480	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJF63_RS15490	COG3584	3D domain protein
CJF63_RS15490	COG1388	LysM domain
CJF63_RS15515	COG4715	Zinc finger, swim domain protein
CJF63_RS15520	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJF63_RS15560	COG0577	efflux transmembrane transporter activity
CJF63_RS15565	COG1136	(ABC) transporter
CJF63_RS15600	COG5002	protein histidine kinase activity
CJF63_RS15605	COG0745	RESPONSE REGULATOR receiver
CJF63_RS15610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJF63_RS15630	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CJF63_RS15635	COG1134	teichoic acid transport
CJF63_RS15640	COG1682	transport, permease protein
CJF63_RS15645	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CJF63_RS15690	COG1609	Transcriptional regulator
CJF63_RS15705	COG0739	heme binding
CJF63_RS15720	COG3279	Response regulator of the LytR AlgR family
CJF63_RS15725	COG4555	ABC transporter
CJF63_RS15730	COG2385	sporulation resulting in formation of a cellular spore
CJF63_RS15745	COG4836	Membrane
CJF63_RS15755	COG1007	ATP synthesis coupled electron transport
CJF63_RS15760	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJF63_RS15765	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CJF63_RS15775	COG0839	Belongs to the complex I subunit 6 family
CJF63_RS15790	COG0649	NAD binding
CJF63_RS15795	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJF63_RS15810	COG5001	Diguanylate cyclase
CJF63_RS15810	COG3300	MHYT domain
CJF63_RS15865	COG0356	it plays a direct role in the translocation of protons across the membrane
CJF63_RS15900	COG0698	ribose 5-phosphate isomerase
CJF63_RS15915	COG2190	(PTS) system
CJF63_RS15920	COG2259	Doxx family
CJF63_RS15925	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJF63_RS15940	COG0009	L-threonylcarbamoyladenylate synthase
CJF63_RS15955	COG2890	protein-(glutamine-N5) methyltransferase activity
CJF63_RS15975	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CJF63_RS15980	COG1494	fructose-1,6-bisphosphatase
CJF63_RS16005	COG4821	SIS domain
CJF63_RS16015	COG3343	RNA polymerase activity
CJF63_RS16025	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS16030	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS16035	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJF63_RS16040	COG0183	Belongs to the thiolase family
CJF63_RS16045	COG2181	nitrate reductase activity
CJF63_RS16045	COG0247	lactate metabolic process
CJF63_RS16050	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJF63_RS16060	COG5001	Diguanylate cyclase
CJF63_RS16060	COG3300	MHYT domain
CJF63_RS16080	COG2197	response regulator
CJF63_RS16085	COG4585	Histidine kinase
CJF63_RS16090	COG0842	Transport permease protein
CJF63_RS16095	COG1131	(ABC) transporter
CJF63_RS16100	COG0024	Methionine aminopeptidase
CJF63_RS16120	COG2234	aminopeptidase activity
CJF63_RS16140	COG1595	DNA-templated transcription, initiation
CJF63_RS16145	COG0018	arginyl-trna synthetase
CJF63_RS16150	COG4506	Protein conserved in bacteria
CJF63_RS16155	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJF63_RS16175	COG0010	Belongs to the arginase family
CJF63_RS16185	COG2814	Major facilitator Superfamily
CJF63_RS16190	COG0789	Transcriptional regulator
CJF63_RS16195	COG0584	glycerophosphoryl diester phosphodiesterase
CJF63_RS16200	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJF63_RS16215	COG1994	Peptidase M50
CJF63_RS16225	COG1078	dGTPase activity
CJF63_RS16230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS16235	COG1120	ATPase activity
CJF63_RS16240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS16265	COG0095	Lipoate-protein ligase
CJF63_RS16270	COG0280	phosphate acetyltransferase
CJF63_RS16285	COG3773	Cell wall hydrolase
CJF63_RS16295	COG2363	Small membrane protein
CJF63_RS16310	COG2233	PERMEase
CJF63_RS16315	COG0561	phosphatase activity
CJF63_RS16320	COG2814	Major facilitator Superfamily
CJF63_RS16330	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CJF63_RS16335	COG1131	(ABC) transporter
CJF63_RS16340	COG2755	lipolytic protein G-D-S-L family
CJF63_RS16345	COG1609	Transcriptional regulator
CJF63_RS16355	COG0460	homoserine dehydrogenase
CJF63_RS16365	COG2873	o-acetylhomoserine
CJF63_RS16375	COG1011	Hydrolase
CJF63_RS16380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJF63_RS16390	COG2197	response regulator
CJF63_RS16400	COG0351	phosphomethylpyrimidine kinase
CJF63_RS16405	COG3706	GGDEF domain
CJF63_RS16410	COG2879	small protein
CJF63_RS16415	COG1966	Carbon starvation protein
CJF63_RS16420	COG3279	Response regulator of the LytR AlgR family
CJF63_RS16425	COG0477	Major facilitator Superfamily
CJF63_RS16450	COG0840	transmembrane signaling receptor activity
CJF63_RS16460	COG1607	acyl-coa hydrolase
CJF63_RS16475	COG0488	(ABC) transporter
CJF63_RS16505	COG0463	Glycosyl transferase, family 2
CJF63_RS16510	COG1309	transcriptional regulator
CJF63_RS16515	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJF63_RS16520	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJF63_RS16520	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJF63_RS16525	COG0628	permease
CJF63_RS16540	COG3279	Response regulator of the LytR AlgR family
CJF63_RS16545	COG3275	phosphorelay sensor kinase activity
CJF63_RS16550	COG2814	Major facilitator Superfamily
CJF63_RS16555	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJF63_RS16560	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CJF63_RS16570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJF63_RS16590	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJF63_RS16595	COG1272	protein, Hemolysin III
CJF63_RS16615	COG0516	GMP reductase activity
CJF63_RS16620	COG1164	Oligoendopeptidase f
CJF63_RS16645	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CJF63_RS16650	COG4853	Protein conserved in bacteria
CJF63_RS16655	COG4863	YycH protein
CJF63_RS16660	COG5002	protein histidine kinase activity
CJF63_RS16665	COG0745	RESPONSE REGULATOR receiver
CJF63_RS16695	COG0305	Participates in initiation and elongation during chromosome replication
CJF63_RS16705	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CJF63_RS16710	COG4241	membrane
CJF63_RS16720	COG0629	single-stranded DNA binding
CJF63_RS16730	COG0012	GTP binding
CJF63_RS16735	COG4481	Protein conserved in bacteria
CJF63_RS16740	COG0668	transmembrane transport
CJF63_RS16750	COG1475	DNA binding
CJF63_RS16755	COG1192	Involved in chromosome partitioning
CJF63_RS16780	COG1847	R3H domain protein
CJF63_RS16785	COG0706	membrane insertase activity
CJF63_RS16795	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CJF63_RS16805	COG0592	DNA-directed DNA polymerase activity
CJF63_RS16810	COG2501	S4 domain
CJF63_RS16820	COG0187	DNA topoisomerase II activity
CJF63_RS16825	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJF63_RS16860	COG0517	IMP dehydrogenase activity
CJF63_RS16860	COG0516	GMP reductase activity
CJF63_RS16865	COG1686	Belongs to the peptidase S11 family
CJF63_RS16895	COG1428	Deoxynucleoside kinase
CJF63_RS16900	COG1428	Deoxynucleoside kinase
CJF63_RS16905	COG1335	isochorismatase
CJF63_RS16915	COG0590	tRNA wobble adenosine to inosine editing
CJF63_RS16925	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CJF63_RS16985	COG1982	Orn Lys Arg decarboxylase major
CJF63_RS16995	COG0470	DNA polymerase III
CJF63_RS17000	COG1774	PSP1 C-terminal conserved region
CJF63_RS17010	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CJF63_RS17020	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CJF63_RS17025	COG2002	toxin-antitoxin pair type II binding
CJF63_RS17030	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJF63_RS17030	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJF63_RS17035	COG0084	hydrolase, TatD family'
CJF63_RS17040	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CJF63_RS17055	COG4466	Protein conserved in bacteria
CJF63_RS17070	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CJF63_RS17080	COG0251	oxidation-reduction process
CJF63_RS17110	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CJF63_RS17115	COG2002	toxin-antitoxin pair type II binding
CJF63_RS17120	COG2244	polysaccharide biosynthetic process
CJF63_RS17125	COG3956	TIGRFAM MazG family protein
CJF63_RS17130	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CJF63_RS17150	COG1098	S1 RNA binding domain
CJF63_RS17165	COG2208	phosphoserine phosphatase activity
CJF63_RS17175	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CJF63_RS17180	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJF63_RS17195	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJF63_RS17200	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CJF63_RS17205	COG0512	Glutamine amidotransferase of anthranilate synthase
CJF63_RS17210	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS17215	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CJF63_RS17220	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CJF63_RS17225	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CJF63_RS17230	COG1396	sequence-specific DNA binding
CJF63_RS17235	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJF63_RS17265	COG3880	PFAM UvrB UvrC protein
CJF63_RS17275	COG0542	response to heat
CJF63_RS17280	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CJF63_RS17290	COG4956	integral membrane protein (PIN domain superfamily)
CJF63_RS17310	COG1045	serine acetyltransferase
CJF63_RS17325	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJF63_RS17330	COG3688	RNA-binding protein containing a PIN domain
CJF63_RS17345	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJF63_RS17350	COG0250	Participates in transcription elongation, termination and antitermination
CJF63_RS17355	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CJF63_RS17375	COG2813	Specifically methylates the guanine in position
CJF63_RS17385	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CJF63_RS17390	COG1358	cellular component organization or biogenesis
CJF63_RS17460	COG0255	Belongs to the universal ribosomal protein uL29 family
CJF63_RS17520	COG0201	protein transport
CJF63_RS17530	COG0024	Methionine aminopeptidase
CJF63_RS17540	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CJF63_RS17575	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJF63_RS17600	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS17605	COG0489	protein tyrosine kinase activity
CJF63_RS17615	COG2194	sulfuric ester hydrolase activity
CJF63_RS17620	COG0726	polysaccharide deacetylase
CJF63_RS17705	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CJF63_RS17710	COG4856	YbbR-like protein
CJF63_RS17725	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJF63_RS17730	COG0596	Alpha beta hydrolase
CJF63_RS17750	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CJF63_RS17755	COG4946	Tricorn protease homolog
CJF63_RS17755	COG1506	peptidase
CJF63_RS17755	COG0823	Involved in the tonB-independent uptake of proteins
CJF63_RS17790	COG2011	ABC-type metal ion transport system permease component
CJF63_RS17795	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJF63_RS17800	COG1464	Belongs to the NlpA lipoprotein family
CJF63_RS17805	COG0604	alcohol dehydrogenase
CJF63_RS17815	COG0277	FAD linked oxidase domain protein
CJF63_RS17820	COG2271	Major facilitator Superfamily
CJF63_RS17830	COG2814	Major facilitator Superfamily
CJF63_RS17845	COG0601	transmembrane transport
CJF63_RS17850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJF63_RS17855	COG0444	Belongs to the ABC transporter superfamily
CJF63_RS17860	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS17865	COG4166	transmembrane transport
CJF63_RS17875	COG2207	Transcriptional regulator
CJF63_RS17890	COG4166	transmembrane transport
CJF63_RS17895	COG4166	transmembrane transport
CJF63_RS17900	COG0656	L-ascorbic acid biosynthetic process
CJF63_RS17905	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJF63_RS17925	COG4149	molybdate abc transporter
CJF63_RS17935	COG1910	domain protein
CJF63_RS17955	COG0583	DNA-binding transcription factor activity
CJF63_RS17960	COG0697	spore germination
CJF63_RS17975	COG0204	Acyl-transferase
CJF63_RS17985	COG1609	Transcriptional regulator
CJF63_RS17995	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS18010	COG0084	hydrolase, TatD family'
CJF63_RS18015	COG5298	Protein conserved in bacteria
CJF63_RS18040	COG0488	(ABC) transporter
CJF63_RS18055	COG0747	negative chemotaxis
CJF63_RS18060	COG0601	transmembrane transport
CJF63_RS18065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJF63_RS18070	COG0444	Belongs to the ABC transporter superfamily
CJF63_RS18075	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS18100	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CJF63_RS18105	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJF63_RS18120	COG2814	Major facilitator Superfamily
CJF63_RS18130	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CJF63_RS18140	COG4294	response to UV
CJF63_RS18145	COG0457	Tetratricopeptide repeat
CJF63_RS18145	COG0705	Rhomboid family
CJF63_RS18155	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CJF63_RS18160	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJF63_RS18165	COG0864	Transcriptional regulator
CJF63_RS18170	COG2337	Toxic component of a toxin-antitoxin (TA) module
CJF63_RS18175	COG2183	response to ionizing radiation
CJF63_RS18270	COG0802	atpase or kinase
CJF63_RS18275	COG1214	PFAM Peptidase M22, glycoprotease
CJF63_RS18280	COG0456	acetyltransferase
CJF63_RS18290	COG0488	(ABC) transporter
CJF63_RS18305	COG1266	CAAX protease self-immunity
CJF63_RS18325	COG2252	PERMEase
CJF63_RS18335	COG5002	protein histidine kinase activity
CJF63_RS18365	COG2226	methyltransferase
CJF63_RS18410	COG1968	undecaprenyl-diphosphatase activity
CJF63_RS18425	COG2205	protein histidine kinase activity
CJF63_RS18430	COG0745	RESPONSE REGULATOR receiver
CJF63_RS18455	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJF63_RS18460	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJF63_RS18465	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CJF63_RS18475	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJF63_RS18490	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CJF63_RS18500	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CJF63_RS18510	COG0151	Belongs to the GarS family
CJF63_RS18540	COG0210	DNA helicase
CJF63_RS18550	COG4851	CamS sex pheromone cAM373 precursor
CJF63_RS18570	COG1335	isochorismatase
CJF63_RS18580	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJF63_RS18585	COG2011	ABC-type metal ion transport system permease component
CJF63_RS18590	COG1464	Belongs to the NlpA lipoprotein family
CJF63_RS18610	COG1846	Transcriptional regulator
CJF63_RS18635	COG1597	lipid kinase activity
CJF63_RS18640	COG0546	phosphoglycolate phosphatase activity
CJF63_RS18645	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS18655	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS18660	COG2076	Multidrug Resistance protein
CJF63_RS18665	COG2309	aminopeptidase activity
CJF63_RS18680	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS18685	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJF63_RS18690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJF63_RS18700	COG4807	Protein conserved in bacteria
CJF63_RS18725	COG1757	Na H antiporter
CJF63_RS18730	COG1473	amidohydrolase
CJF63_RS18745	COG0450	alkyl hydroperoxide reductase
CJF63_RS18765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS18770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS18775	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS18800	COG0166	Belongs to the GPI family
CJF63_RS18845	COG5002	protein histidine kinase activity
CJF63_RS18865	COG3541	Predicted nucleotidyltransferase
CJF63_RS18870	COG2814	Major facilitator Superfamily
CJF63_RS18875	COG0723	plastoquinol--plastocyanin reductase activity
CJF63_RS18875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJF63_RS18885	COG0765	amino acid transport
CJF63_RS18890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJF63_RS18905	COG0840	transmembrane signaling receptor activity
CJF63_RS18910	COG0840	transmembrane signaling receptor activity
CJF63_RS18915	COG0366	Alpha amylase catalytic
CJF63_RS18920	COG1263	PTS System
CJF63_RS18920	COG2190	(PTS) system
CJF63_RS18920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS18950	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CJF63_RS18965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJF63_RS18975	COG1116	anion transmembrane transporter activity
CJF63_RS18980	COG0488	(ABC) transporter
CJF63_RS19025	COG2270	Major facilitator Superfamily
CJF63_RS19040	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJF63_RS19055	COG2310	stress, protein
CJF63_RS19060	COG2310	stress, protein
CJF63_RS19065	COG2310	stress, protein
CJF63_RS19070	COG0861	Integral membrane protein TerC family
CJF63_RS19080	COG3853	Toxic anion resistance protein (TelA)
CJF63_RS19095	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CJF63_RS19105	COG1295	ribonuclease BN
CJF63_RS19115	COG2217	Heavy metal translocating P-type atpase
CJF63_RS19120	COG0697	spore germination
CJF63_RS19140	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS19155	COG3871	stress protein (general stress protein 26)
CJF63_RS19160	COG0387	Pfam Sodium calcium exchanger
CJF63_RS19170	COG0535	radical SAM domain protein
CJF63_RS19195	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CJF63_RS19200	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJF63_RS19205	COG0582	viral genome integration into host DNA
CJF63_RS19210	COG1396	sequence-specific DNA binding
CJF63_RS19230	COG1396	sequence-specific DNA binding
CJF63_RS19265	COG1484	DNA-dependent DNA replication
CJF63_RS19370	COG0582	viral genome integration into host DNA
CJF63_RS19375	COG0582	viral genome integration into host DNA
CJF63_RS19520	COG0101	tRNA pseudouridine synthase activity
CJF63_RS19530	COG3829	transcription factor binding
CJF63_RS19540	COG0833	amino acid
CJF63_RS19545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJF63_RS19585	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS19585	COG1263	PTS System
CJF63_RS19605	COG0463	Glycosyl transferase, family 2
CJF63_RS19620	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CJF63_RS19620	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJF63_RS19640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJF63_RS19660	COG1228	amidohydrolase
CJF63_RS19665	COG1090	epimerase
CJF63_RS19695	COG1988	membrane-bound metal-dependent
CJF63_RS19700	COG1194	a g-specific adenine glycosylase
CJF63_RS19725	COG1132	(ABC) transporter
CJF63_RS19730	COG4129	membrane
CJF63_RS19735	COG0069	glutamate synthase activity
CJF63_RS19735	COG0067	glutamate synthase
CJF63_RS19735	COG0070	glutamate synthase
CJF63_RS19745	COG4555	ABC transporter
CJF63_RS19765	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJF63_RS19770	COG0735	belongs to the Fur family
CJF63_RS19890	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CJF63_RS19895	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CJF63_RS19905	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CJF63_RS19915	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CJF63_RS19930	COG2766	serine protein kinase
CJF63_RS19955	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJF63_RS19965	COG1585	Membrane protein implicated in regulation of membrane protease activity
CJF63_RS19970	COG2268	Band 7 protein
CJF63_RS19980	COG3290	protein histidine kinase activity
CJF63_RS19990	COG2851	Citrate transporter
CJF63_RS20010	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CJF63_RS20015	COG3842	ATPase activity
CJF63_RS20020	COG1175	transmembrane transport
CJF63_RS20025	COG0395	ABC-type sugar transport system, permease component
CJF63_RS20035	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CJF63_RS20040	COG0745	RESPONSE REGULATOR receiver
CJF63_RS20045	COG5002	protein histidine kinase activity
CJF63_RS20055	COG4990	cell redox homeostasis
CJF63_RS20065	COG3290	protein histidine kinase activity
CJF63_RS20070	COG4565	transcriptional regulatory protein
CJF63_RS20075	COG3493	citrate carrier protein
CJF63_RS20080	COG0281	malic enzyme
CJF63_RS20095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS20105	COG5002	protein histidine kinase activity
CJF63_RS20110	COG0745	RESPONSE REGULATOR receiver
CJF63_RS20120	COG0456	acetyltransferase
CJF63_RS20120	COG0454	-acetyltransferase
CJF63_RS20125	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CJF63_RS20130	COG3383	formate dehydrogenase (NAD+) activity
CJF63_RS20135	COG2427	Protein of unknown function (DUF1641)
CJF63_RS20150	COG0531	amino acid
CJF63_RS20155	COG0640	Transcriptional regulator
CJF63_RS20160	COG2217	Heavy metal translocating P-type atpase
CJF63_RS20165	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CJF63_RS20180	COG3227	Zinc metalloprotease (Elastase)
CJF63_RS20200	COG2720	vancomycin resistance protein
CJF63_RS20205	COG1316	TRANSCRIPTIONal
CJF63_RS20210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS20215	COG0346	lactoylglutathione lyase activity
CJF63_RS20220	COG1253	flavin adenine dinucleotide binding
CJF63_RS20225	COG1027	Aspartate ammonia-lyase
CJF63_RS20230	COG1620	l-lactate permease
CJF63_RS20245	COG3104	oligopeptide transport
CJF63_RS20250	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS20255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS20260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJF63_RS20270	COG2226	methyltransferase
CJF63_RS20275	COG0156	8-amino-7-oxononanoate synthase activity
CJF63_RS20290	COG4548	von Willebrand factor, type A
CJF63_RS20295	COG0714	Associated with various cellular activities
CJF63_RS20300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJF63_RS20320	COG0531	amino acid
CJF63_RS20325	COG2188	Transcriptional regulator
CJF63_RS20330	COG1263	PTS System
CJF63_RS20330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS20335	COG0366	Alpha amylase catalytic
CJF63_RS20350	COG0697	spore germination
CJF63_RS20360	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJF63_RS20365	COG1115	amino acid carrier protein
CJF63_RS20370	COG1126	abc transporter atp-binding protein
CJF63_RS20375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJF63_RS20380	COG0765	amino acid transport
CJF63_RS20385	COG0765	amino acid transport
CJF63_RS20390	COG0833	amino acid
CJF63_RS20415	COG2378	regulation of single-species biofilm formation
CJF63_RS20420	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CJF63_RS20425	COG5002	protein histidine kinase activity
CJF63_RS20440	COG0659	secondary active sulfate transmembrane transporter activity
CJF63_RS20455	COG0747	negative chemotaxis
CJF63_RS20465	COG0601	transmembrane transport
CJF63_RS20470	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS20480	COG2271	Major facilitator Superfamily
CJF63_RS20485	COG1846	Transcriptional regulator
CJF63_RS20495	COG1609	Transcriptional regulator
CJF63_RS20500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJF63_RS20515	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJF63_RS20520	COG1879	ABC-type sugar transport system periplasmic component
CJF63_RS20545	COG1063	alcohol dehydrogenase
CJF63_RS20560	COG3568	Endonuclease Exonuclease Phosphatase
CJF63_RS20585	COG1968	undecaprenyl-diphosphatase activity
CJF63_RS20590	COG0840	transmembrane signaling receptor activity
CJF63_RS20595	COG1388	LysM domain
CJF63_RS20595	COG3584	3D domain protein
CJF63_RS20600	COG1476	TRANSCRIPTIONal
CJF63_RS20615	COG3104	oligopeptide transport
CJF63_RS20620	COG1114	Component of the transport system for branched-chain amino acids
CJF63_RS20635	COG1113	amino acid transport
CJF63_RS20640	COG2252	PERMEase
CJF63_RS20665	COG0569	domain protein
CJF63_RS20665	COG0475	glutathione-regulated potassium exporter activity
CJF63_RS20680	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CJF63_RS20685	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CJF63_RS20690	COG0833	amino acid
CJF63_RS20695	COG4990	cell redox homeostasis
CJF63_RS20710	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJF63_RS20715	COG0697	spore germination
CJF63_RS20720	COG0531	amino acid
CJF63_RS20735	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJF63_RS20740	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJF63_RS20745	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJF63_RS20745	COG1918	ferrous iron import across plasma membrane
CJF63_RS20750	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJF63_RS20755	COG0573	inorganic phosphate transmembrane transporter activity
CJF63_RS20760	COG0581	inorganic phosphate transmembrane transporter activity
CJF63_RS20770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJF63_RS20885	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CJF63_RS20910	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CJF63_RS20915	COG1116	anion transmembrane transporter activity
CJF63_RS20920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJF63_RS20925	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJF63_RS20930	COG0352	thiamine-phosphate diphosphorylase activity
CJF63_RS20935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJF63_RS20940	COG2104	thiamine diphosphate biosynthetic process
CJF63_RS20950	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJF63_RS20955	COG0351	phosphomethylpyrimidine kinase
CJF63_RS21000	COG2205	protein histidine kinase activity
CJF63_RS21005	COG2814	Major facilitator Superfamily
CJF63_RS21010	COG1846	Transcriptional regulator
CJF63_RS21025	COG2252	PERMEase
CJF63_RS21030	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS21045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJF63_RS21050	COG1621	beta-fructofuranosidase activity
CJF63_RS21055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS21055	COG1263	PTS System
CJF63_RS21060	COG1609	Transcriptional regulator
CJF63_RS21070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJF63_RS21075	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CJF63_RS21115	COG0778	Nitroreductase
CJF63_RS21120	COG2719	SpoVR family
CJF63_RS21150	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJF63_RS21155	COG1937	Protein conserved in bacteria
CJF63_RS21160	COG0425	Belongs to the sulfur carrier protein TusA family
CJF63_RS21160	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS21165	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS21165	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS21170	COG0425	Belongs to the sulfur carrier protein TusA family
CJF63_RS21175	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJF63_RS21185	COG2210	Belongs to the sulfur carrier protein TusA family
CJF63_RS21190	COG0730	response to heat
CJF63_RS21200	COG1316	TRANSCRIPTIONal
CJF63_RS21205	COG0604	alcohol dehydrogenase
CJF63_RS21210	COG1283	sodium-dependent phosphate transmembrane transporter activity
CJF63_RS21225	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJF63_RS21225	COG3711	transcriptional antiterminator
CJF63_RS21230	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJF63_RS21235	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJF63_RS21255	COG1388	LysM domain
CJF63_RS21255	COG3584	3D domain protein
CJF63_RS21260	COG0577	efflux transmembrane transporter activity
CJF63_RS21265	COG1136	(ABC) transporter
CJF63_RS21275	COG5522	Integral membrane protein (intg_mem_TP0381)
CJF63_RS21290	COG1114	Component of the transport system for branched-chain amino acids
CJF63_RS21295	COG3546	catalase activity
CJF63_RS21330	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS21370	COG0531	amino acid
CJF63_RS21375	COG0475	glutathione-regulated potassium exporter activity
CJF63_RS21385	COG1737	Transcriptional regulator
CJF63_RS21395	COG1263	PTS System
CJF63_RS21395	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJF63_RS21405	COG2259	Doxx family
CJF63_RS21420	COG0697	spore germination
CJF63_RS21425	COG1522	sequence-specific DNA binding
CJF63_RS21440	COG2076	Multidrug Resistance protein
CJF63_RS21445	COG1309	transcriptional regulator
CJF63_RS21450	COG2814	Major facilitator Superfamily
CJF63_RS21455	COG1733	regulation of RNA biosynthetic process
CJF63_RS21465	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJF63_RS21470	COG4533	DNA binding
CJF63_RS21475	COG2211	Major facilitator Superfamily
CJF63_RS21485	COG0693	protein deglycase activity
CJF63_RS21490	COG0753	catalase activity
CJF63_RS21490	COG0693	protein deglycase activity
CJF63_RS21500	COG0531	amino acid
CJF63_RS21505	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CJF63_RS21515	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS21535	COG1132	(ABC) transporter
CJF63_RS21550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJF63_RS21555	COG0765	amino acid transport
CJF63_RS21560	COG1126	abc transporter atp-binding protein
CJF63_RS21575	COG0189	ligase activity
CJF63_RS21605	COG0028	Belongs to the TPP enzyme family
CJF63_RS21610	COG3527	Alpha-acetolactate decarboxylase
CJF63_RS21625	COG0561	phosphatase activity
CJF63_RS21635	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS21635	COG3409	Peptidoglycan-binding domain 1 protein
CJF63_RS21645	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJF63_RS21665	COG0659	secondary active sulfate transmembrane transporter activity
CJF63_RS21685	COG0653	protein targeting
CJF63_RS21690	COG2244	polysaccharide biosynthetic process
CJF63_RS21700	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS21705	COG4196	transglutaminase domain protein
CJF63_RS21720	COG1696	Membrane protein involved in D-alanine export
CJF63_RS21740	COG1024	Enoyl-CoA hydratase
CJF63_RS21760	COG1363	Peptidase, m42
CJF63_RS21780	COG3938	Belongs to the proline racemase family
CJF63_RS21815	COG0601	transmembrane transport
CJF63_RS21820	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJF63_RS21830	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS21840	COG0322	excinuclease ABC activity
CJF63_RS21875	COG0477	Major facilitator Superfamily
CJF63_RS21880	COG3290	protein histidine kinase activity
CJF63_RS21885	COG4565	transcriptional regulatory protein
CJF63_RS21890	COG3181	Tripartite tricarboxylate transporter family receptor
CJF63_RS21920	COG0789	Transcriptional regulator
CJF63_RS21920	COG4978	Transcriptional regulator
CJF63_RS21935	COG0305	Participates in initiation and elongation during chromosome replication
CJF63_RS21985	COG0477	Major facilitator Superfamily
CJF63_RS22035	COG3320	Male sterility
CJF63_RS22035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJF63_RS22060	COG1183	phosphatidylcholine synthase activity
CJF63_RS22080	COG2376	Dihydroxyacetone kinase
CJF63_RS22090	COG2376	Dihydroxyacetone kinase
CJF63_RS22095	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CJF63_RS22100	COG1959	2 iron, 2 sulfur cluster binding
CJF63_RS22135	COG3437	response regulator, receiver
CJF63_RS22135	COG2770	Histidine kinase
CJF63_RS22200	COG3237	CsbD-like
CJF63_RS22225	COG1191	sigma factor activity
CJF63_RS22235	COG2208	phosphoserine phosphatase activity
CJF63_RS22240	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CJF63_RS22245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJF63_RS22245	COG2205	protein histidine kinase activity
CJF63_RS22245	COG2198	Histidine kinase
CJF63_RS22245	COG0784	Response regulator, receiver
CJF63_RS22305	COG0420	3'-5' exonuclease activity
CJF63_RS22310	COG4717	serine-type aminopeptidase activity
CJF63_RS22330	COG1309	transcriptional regulator
CJF63_RS22335	COG2814	Major facilitator Superfamily
CJF63_RS22340	COG0346	lactoylglutathione lyase activity
CJF63_RS22345	COG0346	lactoylglutathione lyase activity
CJF63_RS22350	COG0457	Tetratricopeptide repeat
CJF63_RS22360	COG2267	carboxylic ester hydrolase activity
CJF63_RS22380	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CJF63_RS22385	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CJF63_RS22395	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CJF63_RS22440	COG0477	Major facilitator Superfamily
CJF63_RS22445	COG0477	Major facilitator Superfamily
CJF63_RS22455	COG3973	AAA domain
CJF63_RS22460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJF63_RS22485	COG4980	gas vesicle protein
CJF63_RS22490	COG0537	adenosine 5'-monophosphoramidase activity
CJF63_RS22500	COG1131	(ABC) transporter
CJF63_RS22505	COG4473	ABC transporter
CJF63_RS22520	COG1309	transcriptional regulator
CJF63_RS22530	COG3402	PFAM membrane-flanked domain
CJF63_RS22575	COG3402	PFAM membrane-flanked domain
CJF63_RS22580	COG3428	Bacterial PH domain
CJF63_RS22585	COG2329	Antibiotic biosynthesis monooxygenase
CJF63_RS22590	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJF63_RS22595	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CJF63_RS22600	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CJF63_RS22605	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CJF63_RS22640	COG1309	transcriptional regulator
CJF63_RS22645	COG1511	domain protein
CJF63_RS22670	COG1609	Transcriptional regulator
CJF63_RS22680	COG1234	tRNA 3'-trailer cleavage
CJF63_RS22685	COG0095	Lipoate-protein ligase
CJF63_RS22700	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS22730	COG3209	COG3209 Rhs family protein
CJF63_RS22785	COG1408	metallophosphoesterase
CJF63_RS22790	COG1078	dGTPase activity
CJF63_RS22800	COG1595	DNA-templated transcription, initiation
CJF63_RS22805	COG2207	Transcriptional regulator
CJF63_RS22805	COG3708	Transcriptional regulator
CJF63_RS22825	COG0745	RESPONSE REGULATOR receiver
CJF63_RS22850	COG0501	Belongs to the peptidase M48B family
CJF63_RS22855	COG0840	transmembrane signaling receptor activity
CJF63_RS22860	COG0697	spore germination
CJF63_RS22880	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CJF63_RS22885	COG2224	Isocitrate lyase
CJF63_RS22910	COG4903	ComK protein
CJF63_RS22915	COG0398	Pfam SNARE associated Golgi protein
CJF63_RS22925	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
CJF63_RS22930	COG1074	ATP-dependent DNA helicase activity
CJF63_RS22975	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJF63_RS23000	COG0367	asparagine synthase
CJF63_RS23005	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CJF63_RS23010	COG0753	catalase activity
CJF63_RS23015	COG0004	ammonium transporteR
CJF63_RS23040	COG2996	Protein conserved in bacteria
CJF63_RS23050	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJF63_RS23060	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS23075	COG0561	phosphatase activity
CJF63_RS23090	COG0542	response to heat
CJF63_RS23100	COG2267	carboxylic ester hydrolase activity
CJF63_RS23120	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS23125	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJF63_RS23130	COG5504	Zn-dependent protease
CJF63_RS23140	COG0180	Tryptophanyl-tRNA synthetase
CJF63_RS23155	COG4166	transmembrane transport
CJF63_RS23160	COG0601	transmembrane transport
CJF63_RS23165	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJF63_RS23170	COG0444	Belongs to the ABC transporter superfamily
CJF63_RS23175	COG4608	Belongs to the ABC transporter superfamily
CJF63_RS23180	COG0534	Mate efflux family protein
CJF63_RS23185	COG4166	transmembrane transport
CJF63_RS23205	COG0861	Integral membrane protein TerC family
CJF63_RS23210	COG4862	establishment of competence for transformation
CJF63_RS23215	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJF63_RS23225	COG1164	Oligoendopeptidase f
CJF63_RS23235	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CJF63_RS23240	COG2346	COG2346, Truncated hemoglobins
CJF63_RS23245	COG4116	CYTH
CJF63_RS23255	COG2357	RelA SpoT domain protein
CJF63_RS23265	COG0564	pseudouridine synthase activity
CJF63_RS23295	COG0463	Glycosyl transferase, family 2
CJF63_RS23295	COG1216	Glycosyl transferase, family 2
CJF63_RS23315	COG0457	Tetratricopeptide repeat
CJF63_RS23315	COG0463	Glycosyl transferase, family 2
CJF63_RS23335	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CJF63_RS23350	COG1091	dTDP-4-dehydrorhamnose reductase activity
CJF63_RS23395	COG2153	protein acetylation
CJF63_RS23405	COG2382	esterase
CJF63_RS23420	COG5492	domain, Protein
CJF63_RS23425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJF63_RS23445	COG0512	Glutamine amidotransferase of anthranilate synthase
CJF63_RS23445	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJF63_RS23480	COG1620	l-lactate permease
CJF63_RS23485	COG5634	Uncharacterized conserved protein (DUF2278)
CJF63_RS23545	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJF63_RS23555	COG1476	TRANSCRIPTIONal
CJF63_RS23615	COG2226	methyltransferase
CJF63_RS23630	COG1686	Belongs to the peptidase S11 family
CJF63_RS23635	COG0681	Belongs to the peptidase S26 family
CJF63_RS23670	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS23675	COG3842	ATPase activity
CJF63_RS23680	COG1176	ABC-type spermidine putrescine transport system, permease component I
CJF63_RS23685	COG1177	transmembrane transport
CJF63_RS23690	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CJF63_RS23700	COG2409	Drug exporters of the RND superfamily
CJF63_RS23710	COG0564	pseudouridine synthase activity
CJF63_RS23720	COG2340	Cysteine-rich secretory protein family
CJF63_RS23725	COG0247	lactate metabolic process
CJF63_RS23730	COG0277	FAD linked oxidase domain protein
CJF63_RS23735	COG3835	regulator
CJF63_RS23745	COG0745	RESPONSE REGULATOR receiver
CJF63_RS23750	COG5002	protein histidine kinase activity
CJF63_RS23755	COG2186	Transcriptional regulator
CJF63_RS23775	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CJF63_RS23785	COG2116	formate transmembrane transporter activity
CJF63_RS23790	COG0861	Integral membrane protein TerC family
CJF63_RS23795	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJF63_RS23805	COG2030	dehydratase
CJF63_RS23825	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS23830	COG3243	poly(R)-hydroxyalkanoic acid synthase
CJF63_RS23835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJF63_RS23840	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJF63_RS23860	COG1840	ABC-type Fe3 transport system, periplasmic component
CJF63_RS23890	COG1349	DNA-binding transcription factor activity
CJF63_RS23915	COG2861	carbohydrate metabolic process
CJF63_RS23925	COG3852	Histidine kinase
CJF63_RS23930	COG1846	Transcriptional regulator
CJF63_RS23940	COG2318	DinB family
CJF63_RS23950	COG5002	protein histidine kinase activity
CJF63_RS23960	COG0720	synthase
CJF63_RS23975	COG4873	Protein conserved in bacteria
CJF63_RS24010	COG1780	Probably involved in ribonucleotide reductase function
CJF63_RS24015	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJF63_RS24025	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJF63_RS24030	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJF63_RS24035	COG1725	Transcriptional regulator
CJF63_RS24040	COG1131	(ABC) transporter
CJF63_RS24050	COG1131	(ABC) transporter
CJF63_RS24055	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CJF63_RS24070	COG1522	sequence-specific DNA binding
CJF63_RS24080	COG1335	isochorismatase
CJF63_RS24090	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJF63_RS24095	COG2070	2-Nitropropane dioxygenase
CJF63_RS24100	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CJF63_RS24110	COG1696	Membrane protein involved in D-alanine export
CJF63_RS24135	COG0716	FMN binding
CJF63_RS24150	COG3173	Aminoglycoside phosphotransferase
CJF63_RS24175	COG0534	Mate efflux family protein
CJF63_RS24180	COG1968	undecaprenyl-diphosphatase activity
CJF63_RS24195	COG1846	Transcriptional regulator
CJF63_RS24205	COG1301	dicarboxylic acid transport
CJF63_RS24210	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJF63_RS24215	COG4709	membrane
CJF63_RS24220	COG3874	Sporulation protein YtfJ
CJF63_RS24250	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS24255	COG0028	Belongs to the TPP enzyme family
CJF63_RS24260	COG0440	acetolactate synthase activity
CJF63_RS24265	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CJF63_RS24275	COG0473	3-isopropylmalate dehydrogenase activity
CJF63_RS24300	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CJF63_RS24335	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CJF63_RS24350	COG1183	phosphatidylcholine synthase activity
CJF63_RS24355	COG1368	sulfuric ester hydrolase activity
CJF63_RS24365	COG0019	diaminopimelate decarboxylase activity
CJF63_RS24385	COG0529	Catalyzes the synthesis of activated sulfate
CJF63_RS24390	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJF63_RS24410	COG1648	precorrin-2 dehydrogenase activity
CJF63_RS24420	COG0733	neurotransmitter:sodium symporter activity
CJF63_RS24440	COG1757	Na H antiporter
CJF63_RS24455	COG4758	membrane
CJF63_RS24460	COG4585	Histidine kinase
CJF63_RS24465	COG2197	response regulator
CJF63_RS24475	COG1114	Component of the transport system for branched-chain amino acids
CJF63_RS24485	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CJF63_RS24510	COG1017	nitric oxide dioxygenase activity
CJF63_RS24510	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJF63_RS24530	COG0730	response to heat
CJF63_RS24535	COG0306	phosphate transporter
CJF63_RS24540	COG1392	Phosphate transport regulator
CJF63_RS24545	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJF63_RS24565	COG3852	Histidine kinase
CJF63_RS24570	COG1801	Protein of unknown function DUF72
CJF63_RS24580	COG0582	viral genome integration into host DNA
CJF63_RS24585	COG5002	protein histidine kinase activity
CJF63_RS24610	COG0392	lysyltransferase activity
CJF63_RS24610	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CJF63_RS24625	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJF63_RS24630	COG1686	Belongs to the peptidase S11 family
CJF63_RS24635	COG2715	membrane protein required for spore maturation
CJF63_RS24640	COG0700	Nucleoside recognition
CJF63_RS24645	COG1187	pseudouridine synthase activity
CJF63_RS24655	COG1333	cytochrome c biogenesis protein
CJF63_RS24660	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJF63_RS24665	COG0745	RESPONSE REGULATOR receiver
CJF63_RS24670	COG5002	protein histidine kinase activity
CJF63_RS24675	COG2096	Adenosyltransferase
CJF63_RS24690	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CJF63_RS24695	COG1141	Ferredoxin
CJF63_RS24700	COG4955	Helix-turn-helix domain
CJF63_RS24705	COG0514	ATP-dependent DNA helicase (RecQ)
CJF63_RS24710	COG1266	CAAX protease self-immunity
CJF63_RS24730	COG4862	establishment of competence for transformation
CJF63_RS24735	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CJF63_RS24755	COG0492	ferredoxin-NADP+ reductase activity
CJF63_RS24830	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJF63_RS24845	COG0142	geranyltranstransferase activity
CJF63_RS24855	COG0142	geranyltranstransferase activity
CJF63_RS24875	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CJF63_RS24880	COG0457	Tetratricopeptide repeat
CJF63_RS24900	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CJF63_RS24915	COG4347	Protein of unknown function (DUF1405)
CJF63_RS24930	COG2738	Putative neutral zinc metallopeptidase
CJF63_RS24940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS24950	COG1694	Mazg nucleotide pyrophosphohydrolase
CJF63_RS24965	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CJF63_RS24970	COG0438	transferase activity, transferring glycosyl groups
CJF63_RS25010	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CJF63_RS25010	COG1199	ATP-dependent helicase activity
CJF63_RS25030	COG3935	DnaD domain protein
CJF63_RS25035	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CJF63_RS25045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJF63_RS25045	COG4499	WXG100 protein secretion system (Wss), protein YukC
CJF63_RS25110	COG0116	Belongs to the methyltransferase superfamily
CJF63_RS25120	COG1199	ATP-dependent helicase activity
CJF63_RS25125	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CJF63_RS25135	COG3173	Aminoglycoside phosphotransferase
CJF63_RS25140	COG0024	Methionine aminopeptidase
CJF63_RS25150	COG2233	PERMEase
CJF63_RS25155	COG2311	Membrane
CJF63_RS25165	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJF63_RS25175	COG0456	acetyltransferase
CJF63_RS25210	COG0754	glutathionylspermidine amidase activity
CJF63_RS25225	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJF63_RS25255	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJF63_RS25270	COG1215	transferase activity, transferring glycosyl groups
CJF63_RS25275	COG0438	transferase activity, transferring glycosyl groups
CJF63_RS25290	COG0454	-acetyltransferase
CJF63_RS25310	COG0328	RNA-DNA hybrid ribonuclease activity
CJF63_RS25350	COG1280	lysine exporter protein (LysE YggA)
CJF63_RS25365	COG3162	membrane
CJF63_RS25370	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJF63_RS25375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJF63_RS25390	COG0475	glutathione-regulated potassium exporter activity
CJF63_RS25395	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJF63_RS25400	COG0789	Transcriptional regulator
CJF63_RS25400	COG4978	Transcriptional regulator
CJF63_RS25410	COG2323	membrane
CJF63_RS25415	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CJF63_RS25470	COG1923	regulation of RNA biosynthetic process
CJF63_RS25480	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJF63_RS25485	COG1360	Flagellar Motor Protein
CJF63_RS25490	COG2201	protein-glutamate methylesterase activity
CJF63_RS25495	COG0643	Histidine kinase
CJF63_RS25495	COG2198	Histidine kinase
CJF63_RS25505	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJF63_RS25505	COG1776	CheC inhibitor of MCP methylation
CJF63_RS25520	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CJF63_RS25540	COG1256	bacterial-type flagellum assembly
CJF63_RS25565	COG1815	bacterial-type flagellum-dependent cell motility
CJF63_RS25570	COG1558	bacterial-type flagellum-dependent cell motility
CJF63_RS25585	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJF63_RS25595	COG1157	protein secretion by the type III secretion system
CJF63_RS25650	COG0463	Glycosyl transferase, family 2
CJF63_RS25695	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CJF63_RS25700	COG0741	lytic transglycosylase activity
CJF63_RS25715	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJF63_RS25715	COG1776	CheC inhibitor of MCP methylation
CJF63_RS25725	COG1338	Plays a role in the flagellum-specific transport system
CJF63_RS25730	COG1987	bacterial-type flagellum assembly
CJF63_RS25740	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CJF63_RS25745	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CJF63_RS25755	COG4786	Flagellar basal body rod
CJF63_RS25760	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJF63_RS25785	COG1309	transcriptional regulator
CJF63_RS25805	COG2329	Antibiotic biosynthesis monooxygenase
CJF63_RS25830	COG0583	DNA-binding transcription factor activity
CJF63_RS25840	COG0725	ABC transporter, periplasmic molybdate-binding protein
CJF63_RS25850	COG1234	tRNA 3'-trailer cleavage
CJF63_RS25880	COG1686	Belongs to the peptidase S11 family
CJF63_RS25890	COG0406	alpha-ribazole phosphatase activity
CJF63_RS25920	COG0367	asparagine synthase
CJF63_RS25950	COG1802	Transcriptional regulator
CJF63_RS25955	COG0697	spore germination
CJF63_RS25960	COG0523	cobalamin synthesis protein
CJF63_RS25970	COG0701	Predicted permease
CJF63_RS25980	COG0438	transferase activity, transferring glycosyl groups
CJF63_RS25980	COG1216	Glycosyl transferase, family 2
CJF63_RS25985	COG1757	Na H antiporter
CJF63_RS25990	COG0114	fumarate hydratase activity
CJF63_RS26020	COG3340	Belongs to the peptidase S51 family
CJF63_RS26040	COG0785	Cytochrome C biogenesis protein
CJF63_RS26075	COG2733	membrane
CJF63_RS26115	COG1131	(ABC) transporter
CJF63_RS26130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJF63_RS26135	COG0528	UMP kinase activity
CJF63_RS26145	COG1027	Aspartate ammonia-lyase
CJF63_RS26150	COG0281	malic enzyme
CJF63_RS26155	COG4191	Histidine kinase
CJF63_RS26160	COG0784	Response regulator, receiver
CJF63_RS26165	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJF63_RS26230	COG1051	belongs to the nudix hydrolase family
CJF63_RS26235	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS26245	COG2814	Major facilitator Superfamily
CJF63_RS26260	COG1966	Carbon starvation protein
CJF63_RS26280	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS26290	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJF63_RS26300	COG2223	nitrite transmembrane transporter activity
CJF63_RS26305	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJF63_RS26320	COG2244	polysaccharide biosynthetic process
CJF63_RS26325	COG0733	neurotransmitter:sodium symporter activity
CJF63_RS26335	COG5566	PFAM Mor transcription activator
CJF63_RS26340	COG2323	membrane
CJF63_RS26360	COG2084	Dehydrogenase
CJF63_RS26380	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJF63_RS26390	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS26395	COG0028	Belongs to the TPP enzyme family
CJF63_RS26400	COG0440	acetolactate synthase activity
CJF63_RS26405	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CJF63_RS26415	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJF63_RS26440	COG2814	Major facilitator Superfamily
CJF63_RS26445	COG3384	dioxygenase
CJF63_RS26455	COG3279	Response regulator of the LytR AlgR family
CJF63_RS26460	COG0427	acetyl-CoA hydrolase
CJF63_RS26480	COG1073	alpha beta
CJF63_RS26485	COG1131	(ABC) transporter
CJF63_RS26520	COG0535	radical SAM domain protein
CJF63_RS26525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJF63_RS26545	COG1914	H( )-stimulated, divalent metal cation uptake system
CJF63_RS26560	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJF63_RS26595	COG2390	Transcriptional regulator
CJF63_RS26605	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJF63_RS26610	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CJF63_RS26625	COG4224	UPF0291 protein
CJF63_RS26645	COG0006	proline dipeptidase activity
CJF63_RS26650	COG2132	Multicopper oxidase
CJF63_RS26665	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJF63_RS26680	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CJF63_RS26700	COG4549	nuclear export factor GLE1
CJF63_RS26710	COG0697	spore germination
CJF63_RS26715	COG0583	DNA-binding transcription factor activity
CJF63_RS26720	COG1959	2 iron, 2 sulfur cluster binding
CJF63_RS26725	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CJF63_RS26730	COG0778	Nitroreductase
CJF63_RS26745	COG0628	permease
CJF63_RS26755	COG1231	oxidoreductase activity
CJF63_RS26760	COG0523	cobalamin synthesis protein
CJF63_RS26775	COG0318	PFAM AMP-dependent synthetase and ligase
CJF63_RS26780	COG2030	dehydratase
CJF63_RS26785	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJF63_RS26800	COG0411	ABC transporter
CJF63_RS26820	COG0583	DNA-binding transcription factor activity
CJF63_RS26830	COG1942	4-Oxalocrotonate Tautomerase
CJF63_RS26840	COG1846	Transcriptional regulator
CJF63_RS26850	COG1271	oxidase subunit
CJF63_RS26855	COG1294	oxidase, subunit
CJF63_RS26860	COG4988	ABC transporter
CJF63_RS26865	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CJF63_RS26890	COG1686	Belongs to the peptidase S11 family
CJF63_RS26905	COG1388	LysM domain
CJF63_RS26905	COG0791	NLP P60 protein
CJF63_RS26920	COG0745	RESPONSE REGULATOR receiver
CJF63_RS26925	COG5002	protein histidine kinase activity
CJF63_RS26935	COG0300	oxidoreductase activity
CJF63_RS26975	COG0460	homoserine dehydrogenase
CJF63_RS27000	COG1316	TRANSCRIPTIONal
CJF63_RS27010	COG0745	RESPONSE REGULATOR receiver
CJF63_RS27015	COG5002	protein histidine kinase activity
CJF63_RS27030	COG1285	pathogenesis
CJF63_RS27035	COG1247	-acetyltransferase
CJF63_RS27055	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJF63_RS27065	COG1082	Xylose isomerase domain protein TIM barrel
CJF63_RS27080	COG1279	arginine transmembrane transporter activity
CJF63_RS27095	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJF63_RS27135	COG2002	toxin-antitoxin pair type II binding
CJF63_RS27140	COG1404	Belongs to the peptidase S8 family
CJF63_RS27145	COG0640	Transcriptional regulator
CJF63_RS27150	COG0667	Aldo Keto reductase
CJF63_RS27155	COG2814	Major facilitator Superfamily
CJF63_RS27180	COG0840	transmembrane signaling receptor activity
CJF63_RS27200	COG3949	Membrane
CJF63_RS27205	COG0783	Belongs to the Dps family
CJF63_RS27220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJF63_RS27240	COG4989	oxidoreductase activity
CJF63_RS27245	COG0523	cobalamin synthesis protein
CJF63_RS27250	COG0456	acetyltransferase
CJF63_RS27330	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJF63_RS27330	COG3443	Belongs to the bacterial solute-binding protein 9 family
CJF63_RS27340	COG0702	epimerase
CJF63_RS27350	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJF63_RS27360	COG4166	transmembrane transport
CJF63_RS27375	COG0406	alpha-ribazole phosphatase activity
CJF63_RS27385	COG5337	Spore coat protein CotH
CJF63_RS27390	COG1051	belongs to the nudix hydrolase family
CJF63_RS27395	COG0586	Pfam SNARE associated Golgi protein
CJF63_RS27400	COG2244	polysaccharide biosynthetic process
CJF63_RS27410	COG0701	Predicted permease
CJF63_RS27415	COG3689	TIGRFAM TIGR03943 family protein
CJF63_RS27420	COG1607	acyl-coa hydrolase
CJF63_RS27435	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJF63_RS27450	COG0702	epimerase
CJF63_RS27455	COG2839	Protein conserved in bacteria
CJF63_RS27460	COG1253	flavin adenine dinucleotide binding
CJF63_RS27475	COG1114	Component of the transport system for branched-chain amino acids
CJF63_RS27480	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJF63_RS27500	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS27510	COG1876	peptidase activity
CJF63_RS27520	COG0154	amidase activity
CJF63_RS27525	COG2211	Major facilitator Superfamily
CJF63_RS27545	COG0561	phosphatase activity
CJF63_RS27555	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJF63_RS27560	COG4106	trans-aconitate 2-methyltransferase activity
CJF63_RS27575	COG1819	glycosyl
CJF63_RS27580	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJF63_RS27585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJF63_RS27615	COG0456	acetyltransferase
CJF63_RS27670	COG3874	Sporulation protein YtfJ
CJF63_RS27695	COG2226	methyltransferase
CJF63_RS27715	COG1082	Xylose isomerase domain protein TIM barrel
CJF63_RS27720	COG0346	lactoylglutathione lyase activity
CJF63_RS27730	COG0604	alcohol dehydrogenase
CJF63_RS27735	COG1595	DNA-templated transcription, initiation
CJF63_RS27760	COG0386	Belongs to the glutathione peroxidase family
CJF63_RS27765	COG1305	Transglutaminase-like
CJF63_RS27770	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CJF63_RS27775	COG0714	Associated with various cellular activities
CJF63_RS27790	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CJF63_RS27795	COG1140	nitrate reductase beta subunit
CJF63_RS27800	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CJF63_RS27805	COG2181	nitrate reductase activity
CJF63_RS27825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJF63_RS27830	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CJF63_RS27835	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJF63_RS27840	COG0303	'Molybdopterin
CJF63_RS27845	COG0314	molybdopterin synthase activity
CJF63_RS27855	COG2223	nitrite transmembrane transporter activity
CJF63_RS27875	COG1648	precorrin-2 dehydrogenase activity
CJF63_RS27885	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CJF63_RS27885	COG1587	Uroporphyrinogen-III synthase
CJF63_RS27890	COG2146	nitrite reductase [NAD(P)H] activity
CJF63_RS27895	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJF63_RS27900	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CJF63_RS27935	COG2359	stage V sporulation protein S
CJF63_RS27955	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJF63_RS27970	COG1418	mRNA catabolic process
CJF63_RS27975	COG0488	(ABC) transporter
CJF63_RS27990	COG0629	single-stranded DNA binding
CJF63_RS28005	COG1413	lyase activity
CJF63_RS28020	COG2136	Putative SAM-dependent methyltransferase
CJF63_RS28020	COG2521	methyltransferase
CJF63_RS28025	COG0018	arginyl-trna synthetase
CJF63_RS28060	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CJF63_RS28080	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CJF63_RS28105	COG1674	ftsk spoiiie
CJF63_RS28205	COG1929	Belongs to the glycerate kinase type-1 family
CJF63_RS28210	COG0471	metal ion transport
CJF63_RS28215	COG0745	RESPONSE REGULATOR receiver
CJF63_RS28220	COG3850	Histidine kinase
CJF63_RS28220	COG5002	protein histidine kinase activity
CJF63_RS28235	COG0733	neurotransmitter:sodium symporter activity
CJF63_RS28260	COG2610	gluconate transmembrane transporter activity
CJF63_RS28265	COG1454	alcohol dehydrogenase
CJF63_RS28270	COG1794	racemase activity, acting on amino acids and derivatives
CJF63_RS28280	COG0456	acetyltransferase
CJF63_RS28295	COG1131	(ABC) transporter
CJF63_RS28310	COG0546	phosphoglycolate phosphatase activity
CJF63_RS28330	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJF63_RS28345	COG0768	penicillin binding
CJF63_RS28350	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CJF63_RS28355	COG0204	Acyl-transferase
CJF63_RS28360	COG1272	protein, Hemolysin III
CJF63_RS28370	COG0805	protein transport
CJF63_RS28385	COG1307	EDD domain protein, DegV family
CJF63_RS28390	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CJF63_RS28395	COG1999	signal sequence binding
CJF63_RS28400	COG0071	Belongs to the small heat shock protein (HSP20) family
CJF63_RS28405	COG0367	asparagine synthase
CJF63_RS28425	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJF63_RS28430	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJF63_RS28455	COG1051	belongs to the nudix hydrolase family
CJF63_RS28465	COG0668	transmembrane transport
CJF63_RS28470	COG2203	Gaf domain
CJF63_RS28470	COG4585	Histidine kinase
CJF63_RS28475	COG2197	response regulator
CJF63_RS28485	COG1064	alcohol dehydrogenase
CJF63_RS28510	COG1070	Carbohydrate kinase
CJF63_RS28515	COG1070	Carbohydrate kinase
CJF63_RS28545	COG1125	glycine betaine transport
CJF63_RS28545	COG0517	IMP dehydrogenase activity
CJF63_RS28550	COG1174	glycine betaine transport
CJF63_RS28585	COG1253	flavin adenine dinucleotide binding
CJF63_RS28590	COG1012	belongs to the aldehyde dehydrogenase family
CJF63_RS28595	COG5506	Protein of unknown function (DUF1694)
CJF63_RS28615	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJF63_RS28620	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CJF63_RS28625	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CJF63_RS28630	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJF63_RS28635	COG0456	acetyltransferase
CJF63_RS28640	COG3829	transcription factor binding
CJF63_RS28650	COG1509	lysine 2,3-aminomutase activity
CJF63_RS28690	COG4326	sporulation control protein
CJF63_RS28695	COG0671	phosphoesterase, PA-phosphatase related
CJF63_RS28700	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CJF63_RS28705	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJF63_RS28735	COG1787	Restriction endonuclease
CJF63_RS28735	COG1715	Restriction endonuclease
CJF63_RS28845	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJF63_RS28885	COG4499	WXG100 protein secretion system (Wss), protein YukC
CJF63_RS28885	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJF63_RS28890	COG2814	Major facilitator Superfamily
CJF63_RS28895	COG4841	protein insertion into membrane
CJF63_RS28900	COG0372	Belongs to the citrate synthase family
CJF63_RS28905	COG2079	MmgE PrpD family protein
CJF63_RS28910	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CJF63_RS28915	COG1960	acyl-CoA dehydrogenase activity
CJF63_RS28920	COG2084	Dehydrogenase
CJF63_RS28930	COG1280	lysine exporter protein (LysE YggA)
CJF63_RS28935	COG1024	Enoyl-CoA hydratase
CJF63_RS28950	COG0420	3'-5' exonuclease activity
CJF63_RS28955	COG0419	ATPase involved in DNA repair
CJF63_RS28990	COG2223	nitrite transmembrane transporter activity
CJF63_RS29000	COG1028	Short-chain dehydrogenase reductase Sdr
CJF63_RS29005	COG1169	isochorismate synthase
CJF63_RS29010	COG1021	2,3-dihydroxybenzoate-AMP ligase
CJF63_RS29015	COG3433	isochorismatase activity
CJF63_RS29015	COG1535	isochorismatase
CJF63_RS29020	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJF63_RS29025	COG3251	PFAM MbtH domain protein
CJF63_RS29030	COG2814	Major facilitator Superfamily
CJF63_RS29045	COG0776	regulation of translation
CJF63_RS29055	COG2318	DinB family
CJF63_RS29065	COG1115	amino acid carrier protein
CJF63_RS29080	COG2329	Antibiotic biosynthesis monooxygenase
CJF63_RS29085	COG1187	pseudouridine synthase activity
CJF63_RS29090	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJF63_RS29110	COG0596	Alpha beta hydrolase
CJF63_RS29115	COG2814	Major facilitator Superfamily
CJF63_RS29135	COG2226	methyltransferase
CJF63_RS29180	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJF63_RS29235	COG3344	reverse transcriptase
CJF63_RS29295	COG3344	reverse transcriptase
CJF63_RS29395	COG0457	Tetratricopeptide repeat
CJF63_RS29420	COG4974	Belongs to the 'phage' integrase family
CJF63_RS29435	COG3443	Belongs to the bacterial solute-binding protein 9 family
CJF63_RS29490	COG4974	Belongs to the 'phage' integrase family
CJF63_RS29505	COG2002	toxin-antitoxin pair type II binding
CJF63_RS29690	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CJF63_RS29695	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CJF63_RS29700	COG1215	transferase activity, transferring glycosyl groups
CJF63_RS29725	COG0671	phosphoesterase, PA-phosphatase related
CJF63_RS29730	COG4196	transglutaminase domain protein
CJF63_RS29750	COG2311	Membrane
CJF63_RS29885	COG4962	Type ii secretion system protein e
CJF63_RS30105	COG3344	reverse transcriptase
CJF63_RS30250	COG4166	transmembrane transport
CJF63_RS30265	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJF63_RS30390	COG0791	NLP P60 protein
CJF63_RS30390	COG0741	lytic transglycosylase activity
CJF63_RS30560	COG1192	Involved in chromosome partitioning
CJF63_RS30615	COG1683	Conserved Protein
CJF63_RS30620	COG1309	transcriptional regulator
CJF63_RS30700	COG0681	Belongs to the peptidase S26 family
CJF63_RS30730	COG1280	lysine exporter protein (LysE YggA)