locus-tag class description KD35_RS00020 PF01654 Cytochrome bd terminal oxidase subunit I KD35_RS00025 PF02322 Cytochrome bd terminal oxidase subunit II KD35_RS00030 PF02040 Arsenical pump membrane protein KD35_RS00035 PF13667 ThiC-associated domain KD35_RS00035 PF01964 Radical SAM ThiC family KD35_RS00040 PF02652 L-lactate permease KD35_RS00050 PF09988 Uncharacterized metal-binding protein (DUF2227) KD35_RS00060 PF00884 Sulfatase KD35_RS00065 PF01063 Amino-transferase class IV KD35_RS00075 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS00075 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS00095 PF02028 BCCT, betaine/carnitine/choline family transporter KD35_RS00100 PF06725 3D domain KD35_RS00100 PF01476 LysM domain KD35_RS00125 PF04434 SWIM zinc finger KD35_RS00130 PF00176 SNF2 family N-terminal domain KD35_RS00130 PF12419 SNF2 Helicase protein KD35_RS00130 PF00271 Helicase conserved C-terminal domain KD35_RS00160 PF04545 Sigma-70, region 4 KD35_RS00160 PF04542 Sigma-70 region 2 KD35_RS00165 PF04893 Yip1 domain KD35_RS00170 PF02687 FtsX-like permease family KD35_RS00170 PF12704 MacB-like periplasmic core domain KD35_RS00175 PF00005 ABC transporter KD35_RS00195 PF07690 Major Facilitator Superfamily KD35_RS00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS00210 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS00210 PF16736 Single Cache-like KD35_RS00210 PF00989 PAS fold KD35_RS00215 PF00486 Transcriptional regulatory protein, C terminal KD35_RS00215 PF00072 Response regulator receiver domain KD35_RS00220 PF16363 GDP-mannose 4,6 dehydratase KD35_RS00225 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS00230 PF07977 FabA-like domain KD35_RS00235 PF02350 UDP-N-acetylglucosamine 2-epimerase KD35_RS00240 PF08239 Bacterial SH3 domain KD35_RS00240 PF00005 ABC transporter KD35_RS00245 PF01061 ABC-2 type transporter KD35_RS00250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS00250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS00250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS00295 PF12116 Stage III sporulation protein D KD35_RS00310 PF01551 Peptidase family M23 KD35_RS00320 PF00005 ABC transporter KD35_RS00325 PF00072 Response regulator receiver domain KD35_RS00325 PF04397 LytTr DNA-binding domain KD35_RS00330 PF00005 ABC transporter KD35_RS00335 PF08486 Stage II sporulation protein KD35_RS00340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KD35_RS00350 PF06612 Protein of unknown function (DUF1146) KD35_RS00355 PF00361 Proton-conducting membrane transporter KD35_RS00360 PF00361 Proton-conducting membrane transporter KD35_RS00365 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KD35_RS00365 PF00361 Proton-conducting membrane transporter KD35_RS00365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KD35_RS00370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KD35_RS00375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KD35_RS00385 PF00146 NADH dehydrogenase KD35_RS00390 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KD35_RS00395 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KD35_RS00400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KD35_RS00405 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KD35_RS00410 PF00563 EAL domain KD35_RS00410 PF03707 Bacterial signalling protein N terminal repeat KD35_RS00410 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS00425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KD35_RS00425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KD35_RS00430 PF02874 ATP synthase alpha/beta family, beta-barrel domain KD35_RS00430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KD35_RS00435 PF00231 ATP synthase KD35_RS00440 PF00306 ATP synthase alpha/beta chain, C terminal domain KD35_RS00440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KD35_RS00440 PF02874 ATP synthase alpha/beta family, beta-barrel domain KD35_RS00445 PF00213 ATP synthase delta (OSCP) subunit KD35_RS00450 PF00430 ATP synthase B/B' CF(0) KD35_RS00455 PF00137 ATP synthase subunit C KD35_RS00460 PF00119 ATP synthase A chain KD35_RS00465 PF03899 ATP synthase I chain KD35_RS00485 PF00464 Serine hydroxymethyltransferase KD35_RS00490 PF04260 Protein of unknown function (DUF436) KD35_RS00495 PF02502 Ribose/Galactose Isomerase KD35_RS00500 PF01451 Low molecular weight phosphotyrosine protein phosphatase KD35_RS00505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KD35_RS00510 PF07681 DoxX KD35_RS00515 PF01613 Flavin reductase like domain KD35_RS00525 PF02659 Putative manganese efflux pump KD35_RS00530 PF01300 Telomere recombination KD35_RS00530 PF03481 Putative GTP-binding controlling metal-binding KD35_RS00540 PF09551 Stage II sporulation protein R (spore_II_R) KD35_RS00545 PF17827 PrmC N-terminal domain KD35_RS00545 PF13847 Methyltransferase domain KD35_RS00550 PF00472 RF-1 domain KD35_RS00550 PF03462 PCRF domain KD35_RS00555 PF00265 Thymidine kinase KD35_RS00560 PF01197 Ribosomal protein L31 KD35_RS00565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KD35_RS00565 PF07497 Rho termination factor, RNA-binding domain KD35_RS00565 PF07498 Rho termination factor, N-terminal domain KD35_RS00570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KD35_RS00575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KD35_RS00580 PF01116 Fructose-bisphosphate aldolase class-II KD35_RS00585 PF00072 Response regulator receiver domain KD35_RS00590 PF10740 Domain of unknown function (DUF2529) KD35_RS00595 PF00117 Glutamine amidotransferase class-I KD35_RS00595 PF06418 CTP synthase N-terminus KD35_RS00600 PF05066 HB1, ASXL, restriction endonuclease HTH domain KD35_RS00610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS00610 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS00610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS00615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS00615 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS00615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS00620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KD35_RS00620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KD35_RS00625 PF00108 Thiolase, N-terminal domain KD35_RS00625 PF02803 Thiolase, C-terminal domain KD35_RS00630 PF02754 Cysteine-rich domain KD35_RS00630 PF13183 4Fe-4S dicluster domain KD35_RS00635 PF13091 PLD-like domain KD35_RS00640 PF03851 UV-endonuclease UvdE KD35_RS00645 PF00563 EAL domain KD35_RS00645 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS00645 PF03707 Bacterial signalling protein N terminal repeat KD35_RS00660 PF00072 Response regulator receiver domain KD35_RS00660 PF00196 Bacterial regulatory proteins, luxR family KD35_RS00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS00665 PF07730 Histidine kinase KD35_RS00675 PF00005 ABC transporter KD35_RS00680 PF00557 Metallopeptidase family M24 KD35_RS00695 PF01473 Putative cell wall binding repeat KD35_RS00695 PF02324 Glycosyl hydrolase family 70 KD35_RS00700 PF02225 PA domain KD35_RS00700 PF04389 Peptidase family M28 KD35_RS00720 PF04542 Sigma-70 region 2 KD35_RS00720 PF08281 Sigma-70, region 4 KD35_RS00725 PF00750 tRNA synthetases class I (R) KD35_RS00725 PF05746 DALR anticodon binding domain KD35_RS00725 PF03485 Arginyl tRNA synthetase N terminal domain KD35_RS00730 PF09148 Domain of unknown function (DUF1934) KD35_RS00735 PF02016 LD-carboxypeptidase N-terminal domain KD35_RS00735 PF17676 LD-carboxypeptidase C-terminal domain KD35_RS00755 PF00491 Arginase family KD35_RS00760 PF17284 Spermidine synthase tetramerisation domain KD35_RS00765 PF07690 Major Facilitator Superfamily KD35_RS00770 PF13411 MerR HTH family regulatory protein KD35_RS00775 PF03009 Glycerophosphoryl diester phosphodiesterase family KD35_RS00780 PF00912 Transglycosylase KD35_RS00780 PF00905 Penicillin binding protein transpeptidase domain KD35_RS00785 PF08741 YwhD family KD35_RS00790 PF02163 Peptidase family M50 KD35_RS00795 PF01361 Tautomerase enzyme KD35_RS00800 PF01966 HD domain KD35_RS00805 PF01497 Periplasmic binding protein KD35_RS00810 PF00005 ABC transporter KD35_RS00815 PF01032 FecCD transport family KD35_RS00820 PF01032 FecCD transport family KD35_RS00825 PF01032 FecCD transport family KD35_RS00830 PF07293 Protein of unknown function (DUF1450) KD35_RS00845 PF03099 Biotin/lipoate A/B protein ligase family KD35_RS00850 PF01515 Phosphate acetyl/butaryl transferase KD35_RS00855 PF06778 Chlorite dismutase KD35_RS00860 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS00860 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS00865 PF07486 Cell Wall Hydrolase KD35_RS00870 PF09671 Spore coat protein (Spore_GerQ) KD35_RS00875 PF04241 Protein of unknown function (DUF423) KD35_RS00885 PF02254 TrkA-N domain KD35_RS00885 PF07885 Ion channel KD35_RS00890 PF00860 Permease family KD35_RS00900 PF12823 Domain of unknown function (DUF3817) KD35_RS00905 PF03167 Uracil DNA glycosylase superfamily KD35_RS00910 PF12679 ABC-2 family transporter protein KD35_RS00915 PF00005 ABC transporter KD35_RS00920 PF13472 GDSL-like Lipase/Acylhydrolase family KD35_RS00925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KD35_RS00925 PF00356 Bacterial regulatory proteins, lacI family KD35_RS00935 PF03447 Homoserine dehydrogenase, NAD binding domain KD35_RS00935 PF00742 Homoserine dehydrogenase KD35_RS00935 PF01842 ACT domain KD35_RS00940 PF04204 Homoserine O-succinyltransferase KD35_RS00945 PF01053 Cys/Met metabolism PLP-dependent enzyme KD35_RS00955 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS00960 PF00027 Cyclic nucleotide-binding domain KD35_RS00965 PF02525 Flavodoxin-like fold KD35_RS00970 PF00196 Bacterial regulatory proteins, luxR family KD35_RS00970 PF00072 Response regulator receiver domain KD35_RS00980 PF08543 Phosphomethylpyrimidine kinase KD35_RS00985 PF07694 5TMR of 5TMR-LYT KD35_RS00985 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS00990 PF04328 Selenoprotein, putative KD35_RS00995 PF13722 5TM C-terminal transporter carbon starvation CstA KD35_RS00995 PF02554 Carbon starvation protein CstA KD35_RS01000 PF00072 Response regulator receiver domain KD35_RS01000 PF04397 LytTr DNA-binding domain KD35_RS01005 PF07690 Major Facilitator Superfamily KD35_RS01010 PF03808 Glycosyl transferase WecB/TagA/CpsF family KD35_RS01025 PF03458 UPF0126 domain KD35_RS01030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS01040 PF03061 Thioesterase superfamily KD35_RS01050 PF00535 Glycosyl transferase family 2 KD35_RS01055 PF00005 ABC transporter KD35_RS01055 PF12848 ABC transporter KD35_RS01080 PF00535 Glycosyl transferase family 2 KD35_RS01085 PF00440 Bacterial regulatory proteins, tetR family KD35_RS01090 PF00873 AcrB/AcrD/AcrF family KD35_RS01095 PF01625 Peptide methionine sulfoxide reductase KD35_RS01095 PF01641 SelR domain KD35_RS01100 PF01594 AI-2E family transporter KD35_RS01105 PF04172 LrgB-like family KD35_RS01110 PF03788 LrgA family KD35_RS01115 PF04397 LytTr DNA-binding domain KD35_RS01115 PF00072 Response regulator receiver domain KD35_RS01120 PF13492 GAF domain KD35_RS01120 PF06580 Histidine kinase KD35_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS01120 PF07694 5TMR of 5TMR-LYT KD35_RS01125 PF07690 Major Facilitator Superfamily KD35_RS01130 PF02028 BCCT, betaine/carnitine/choline family transporter KD35_RS01135 PF02898 Nitric oxide synthase, oxygenase domain KD35_RS01140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KD35_RS01140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KD35_RS01150 PF02293 AmiS/UreI family transporter KD35_RS01160 PF16363 GDP-mannose 4,6 dehydratase KD35_RS01165 PF03006 Haemolysin-III related KD35_RS01175 PF00271 Helicase conserved C-terminal domain KD35_RS01175 PF00270 DEAD/DEAH box helicase KD35_RS01175 PF03880 DbpA RNA binding domain KD35_RS01185 PF00478 IMP dehydrogenase / GMP reductase domain KD35_RS01190 PF01432 Peptidase family M3 KD35_RS01190 PF08439 Oligopeptidase F KD35_RS01200 PF02590 Predicted SPOUT methyltransferase KD35_RS01210 PF13180 PDZ domain KD35_RS01215 PF00753 Metallo-beta-lactamase superfamily KD35_RS01220 PF09648 YycH protein KD35_RS01225 PF07435 YycH protein KD35_RS01230 PF00672 HAMP domain KD35_RS01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS01230 PF13426 PAS domain KD35_RS01230 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS01235 PF00072 Response regulator receiver domain KD35_RS01235 PF00486 Transcriptional regulatory protein, C terminal KD35_RS01260 PF00709 Adenylosuccinate synthetase KD35_RS01265 PF00772 DnaB-like helicase N terminal domain KD35_RS01265 PF03796 DnaB-like helicase C terminal domain KD35_RS01270 PF01281 Ribosomal protein L9, N-terminal domain KD35_RS01270 PF03948 Ribosomal protein L9, C-terminal domain KD35_RS01275 PF02272 DHHA1 domain KD35_RS01275 PF01368 DHH family KD35_RS01280 PF09991 Predicted membrane protein (DUF2232) KD35_RS01285 PF01084 Ribosomal protein S18 KD35_RS01290 PF00436 Single-strand binding protein family KD35_RS01295 PF01250 Ribosomal protein S6 KD35_RS01300 PF06071 Protein of unknown function (DUF933) KD35_RS01300 PF01926 50S ribosome-binding GTPase KD35_RS01305 PF06107 Bacterial protein of unknown function (DUF951) KD35_RS01310 PF00924 Mechanosensitive ion channel KD35_RS01315 PF06866 Protein of unknown function (DUF1256) KD35_RS01320 PF17762 HTH domain found in ParB protein KD35_RS01320 PF02195 ParB-like nuclease domain KD35_RS01325 PF13614 AAA domain KD35_RS01330 PF17762 HTH domain found in ParB protein KD35_RS01330 PF02195 ParB-like nuclease domain KD35_RS01335 PF02527 rRNA small subunit methyltransferase G KD35_RS01340 PF13932 GidA associated domain KD35_RS01340 PF01134 Glucose inhibited division protein A KD35_RS01345 PF01926 50S ribosome-binding GTPase KD35_RS01345 PF10396 GTP-binding protein TrmE N-terminus KD35_RS01345 PF12631 MnmE helical domain KD35_RS01350 PF14804 Jag N-terminus KD35_RS01350 PF01424 R3H domain KD35_RS01355 PF02096 60Kd inner membrane protein KD35_RS01360 PF00825 Ribonuclease P KD35_RS01365 PF00468 Ribosomal protein L34 KD35_RS01370 PF00308 Bacterial dnaA protein KD35_RS01370 PF11638 DnaA N-terminal domain KD35_RS01370 PF08299 Bacterial dnaA protein helix-turn-helix KD35_RS01375 PF02768 DNA polymerase III beta subunit, C-terminal domain KD35_RS01375 PF02767 DNA polymerase III beta subunit, central domain KD35_RS01375 PF00712 DNA polymerase III beta subunit, N-terminal domain KD35_RS01385 PF02463 RecF/RecN/SMC N terminal domain KD35_RS01390 PF00204 DNA gyrase B KD35_RS01390 PF00986 DNA gyrase B subunit, carboxyl terminus KD35_RS01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS01390 PF01751 Toprim domain KD35_RS01395 PF03989 DNA gyrase C-terminal domain, beta-propeller KD35_RS01395 PF00521 DNA gyrase/topoisomerase IV, subunit A KD35_RS01425 PF14175 YaaC-like Protein KD35_RS01430 PF00571 CBS domain KD35_RS01430 PF00478 IMP dehydrogenase / GMP reductase domain KD35_RS01435 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS01435 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS01440 PF01680 SOR/SNZ family KD35_RS01445 PF01174 SNO glutamine amidotransferase family KD35_RS01450 PF02403 Seryl-tRNA synthetase N-terminal domain KD35_RS01450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS01465 PF01712 Deoxynucleoside kinase KD35_RS01470 PF01712 Deoxynucleoside kinase KD35_RS01475 PF00857 Isochorismatase family KD35_RS01485 PF14437 MafB19-like deaminase KD35_RS01490 PF12169 DNA polymerase III subunits gamma and tau domain III KD35_RS01495 PF02575 YbaB/EbfC DNA-binding family KD35_RS01500 PF02132 RecR protein KD35_RS01500 PF13662 Toprim domain KD35_RS01505 PF10704 Protein of unknown function (DUF2508) KD35_RS01510 PF07441 SigmaK-factor processing regulatory protein BofA KD35_RS01545 PF01276 Orn/Lys/Arg decarboxylase, major domain KD35_RS01545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KD35_RS01550 PF02223 Thymidylate kinase KD35_RS01555 PF09115 DNA polymerase III, delta subunit, C terminal KD35_RS01560 PF04468 PSP1 C-terminal conserved region KD35_RS01565 PF06156 Initiation control protein YabA KD35_RS01570 PF05175 Methyltransferase small domain KD35_RS01575 PF01541 GIY-YIG catalytic domain KD35_RS01580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KD35_RS01585 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KD35_RS01585 PF18277 AbrB C-terminal domain KD35_RS01590 PF08264 Anticodon-binding domain of tRNA KD35_RS01590 PF01588 Putative tRNA binding domain KD35_RS01590 PF09334 tRNA synthetases class I (M) KD35_RS01595 PF01026 TatD related DNase KD35_RS01600 PF13662 Toprim domain KD35_RS01600 PF13331 Domain of unknown function (DUF4093) KD35_RS01605 PF00398 Ribosomal RNA adenine dimethylase KD35_RS01610 PF05582 YabG peptidase U57 KD35_RS01615 PF06257 Biofilm formation stimulator VEG KD35_RS01620 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS01625 PF00288 GHMP kinases N terminal domain KD35_RS01625 PF08544 GHMP kinases C terminal KD35_RS01630 PF09182 Bacterial purine repressor, N-terminal KD35_RS01630 PF00156 Phosphoribosyl transferase domain KD35_RS01635 PF01042 Endoribonuclease L-PSP KD35_RS01640 PF04026 SpoVG KD35_RS01645 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS01645 PF00483 Nucleotidyl transferase KD35_RS01650 PF14572 Phosphoribosyl synthetase-associated domain KD35_RS01650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KD35_RS01655 PF01195 Peptidyl-tRNA hydrolase KD35_RS01665 PF17757 UvrB interaction domain KD35_RS01665 PF00271 Helicase conserved C-terminal domain KD35_RS01665 PF00270 DEAD/DEAH box helicase KD35_RS01665 PF02559 CarD-like/TRCF domain KD35_RS01665 PF03461 TRCF domain KD35_RS01670 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KD35_RS01670 PF15714 Stage V sporulation protein T C-terminal, transcription factor KD35_RS01675 PF01943 Polysaccharide biosynthesis protein KD35_RS01675 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS01680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KD35_RS01680 PF03819 MazG nucleotide pyrophosphohydrolase domain KD35_RS01685 PF01479 S4 domain KD35_RS01690 PF07873 YabP family KD35_RS01695 PF09578 Spore cortex protein YabQ (Spore_YabQ) KD35_RS01705 PF00575 S1 RNA binding domain KD35_RS01720 PF07228 Stage II sporulation protein E (SpoIIE) KD35_RS01725 PF01171 PP-loop family KD35_RS01725 PF11734 TilS substrate C-terminal domain KD35_RS01725 PF09179 TilS substrate binding domain KD35_RS01730 PF00156 Phosphoribosyl transferase domain KD35_RS01735 PF01434 Peptidase family M41 KD35_RS01735 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS01735 PF06480 FtsH Extracellular KD35_RS01735 PF17862 AAA+ lid domain KD35_RS01740 PF03309 Type III pantothenate kinase KD35_RS01745 PF01430 Hsp33 protein KD35_RS01750 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS01755 PF00425 chorismate binding enzyme KD35_RS01755 PF04715 Anthranilate synthase component I, N terminal region KD35_RS01760 PF00117 Glutamine amidotransferase class-I KD35_RS01765 PF01063 Amino-transferase class IV KD35_RS01770 PF00809 Pterin binding enzyme KD35_RS01775 PF02152 Dihydroneopterin aldolase KD35_RS01780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KD35_RS01785 PF01381 Helix-turn-helix KD35_RS01790 PF01207 Dihydrouridine synthase (Dus) KD35_RS01795 PF01336 OB-fold nucleic acid binding domain KD35_RS01795 PF00152 tRNA synthetases class II (D, K and N) KD35_RS01815 PF17727 CtsR C-terminal dimerization domain KD35_RS01815 PF05848 CtsR N-terminal HTH domain KD35_RS01820 PF02151 UvrB/uvrC motif KD35_RS01825 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KD35_RS01830 PF02861 Clp amino terminal domain, pathogenicity island component KD35_RS01830 PF17871 AAA lid domain KD35_RS01830 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS01830 PF07724 AAA domain (Cdc48 subfamily) KD35_RS01830 PF10431 C-terminal, D2-small domain, of ClpB protein KD35_RS01835 PF18073 Rubredoxin metal binding domain KD35_RS01840 PF10635 DisA bacterial checkpoint controller linker region KD35_RS01840 PF02457 DisA bacterial checkpoint controller nucleotide-binding KD35_RS01850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KD35_RS01855 PF02542 YgbB family KD35_RS01860 PF00749 tRNA synthetases class I (E and Q), catalytic domain KD35_RS01865 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS01865 PF06426 Serine acetyltransferase, N-terminal KD35_RS01870 PF01406 tRNA synthetases class I (C) catalytic domain KD35_RS01870 PF09190 DALR domain KD35_RS01875 PF00636 Ribonuclease III domain KD35_RS01880 PF00588 SpoU rRNA Methylase family KD35_RS01880 PF08032 RNA 2'-O ribose methyltransferase substrate binding KD35_RS01885 PF05991 YacP-like NYN domain KD35_RS01890 PF08281 Sigma-70, region 4 KD35_RS01890 PF04542 Sigma-70 region 2 KD35_RS01895 PF00471 Ribosomal protein L33 KD35_RS01900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KD35_RS01905 PF00467 KOW motif KD35_RS01905 PF02357 Transcription termination factor nusG KD35_RS01910 PF00298 Ribosomal protein L11, RNA binding domain KD35_RS01910 PF03946 Ribosomal protein L11, N-terminal domain KD35_RS01915 PF00687 Ribosomal protein L1p/L10e family KD35_RS01920 PF00466 Ribosomal protein L10 KD35_RS01925 PF00542 Ribosomal protein L7/L12 C-terminal domain KD35_RS01925 PF16320 Ribosomal protein L7/L12 dimerisation domain KD35_RS01930 PF05175 Methyltransferase small domain KD35_RS01935 PF00562 RNA polymerase Rpb2, domain 6 KD35_RS01935 PF10385 RNA polymerase beta subunit external 1 domain KD35_RS01935 PF04563 RNA polymerase beta subunit KD35_RS01935 PF04561 RNA polymerase Rpb2, domain 2 KD35_RS01935 PF04565 RNA polymerase Rpb2, domain 3 KD35_RS01935 PF04560 RNA polymerase Rpb2, domain 7 KD35_RS01940 PF04983 RNA polymerase Rpb1, domain 3 KD35_RS01940 PF05000 RNA polymerase Rpb1, domain 4 KD35_RS01940 PF00623 RNA polymerase Rpb1, domain 2 KD35_RS01940 PF04998 RNA polymerase Rpb1, domain 5 KD35_RS01940 PF04997 RNA polymerase Rpb1, domain 1 KD35_RS01945 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KD35_RS01950 PF00164 Ribosomal protein S12/S23 KD35_RS01955 PF00177 Ribosomal protein S7p/S5e KD35_RS01960 PF00679 Elongation factor G C-terminus KD35_RS01960 PF14492 Elongation Factor G, domain II KD35_RS01960 PF03764 Elongation factor G, domain IV KD35_RS01960 PF00009 Elongation factor Tu GTP binding domain KD35_RS01960 PF03144 Elongation factor Tu domain 2 KD35_RS01965 PF00009 Elongation factor Tu GTP binding domain KD35_RS01965 PF03144 Elongation factor Tu domain 2 KD35_RS01965 PF03143 Elongation factor Tu C-terminal domain KD35_RS01970 PF00338 Ribosomal protein S10p/S20e KD35_RS01975 PF00297 Ribosomal protein L3 KD35_RS01980 PF00573 Ribosomal protein L4/L1 family KD35_RS01985 PF00276 Ribosomal protein L23 KD35_RS01990 PF03947 Ribosomal Proteins L2, C-terminal domain KD35_RS01990 PF00181 Ribosomal Proteins L2, RNA binding domain KD35_RS01995 PF00203 Ribosomal protein S19 KD35_RS02000 PF00237 Ribosomal protein L22p/L17e KD35_RS02005 PF07650 KH domain KD35_RS02005 PF00189 Ribosomal protein S3, C-terminal domain KD35_RS02010 PF00252 Ribosomal protein L16p/L10e KD35_RS02015 PF00831 Ribosomal L29 protein KD35_RS02020 PF00366 Ribosomal protein S17 KD35_RS02025 PF00238 Ribosomal protein L14p/L23e KD35_RS02030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KD35_RS02030 PF00467 KOW motif KD35_RS02035 PF00673 ribosomal L5P family C-terminus KD35_RS02035 PF00281 Ribosomal protein L5 KD35_RS02040 PF00253 Ribosomal protein S14p/S29e KD35_RS02045 PF00410 Ribosomal protein S8 KD35_RS02050 PF00347 Ribosomal protein L6 KD35_RS02055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KD35_RS02060 PF03719 Ribosomal protein S5, C-terminal domain KD35_RS02060 PF00333 Ribosomal protein S5, N-terminal domain KD35_RS02065 PF00327 Ribosomal protein L30p/L7e KD35_RS02070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KD35_RS02075 PF00344 SecY translocase KD35_RS02080 PF05191 Adenylate kinase, active site lid KD35_RS02085 PF00557 Metallopeptidase family M24 KD35_RS02090 PF01176 Translation initiation factor 1A / IF-1 KD35_RS02095 PF00444 Ribosomal protein L36 KD35_RS02100 PF00416 Ribosomal protein S13/S18 KD35_RS02105 PF00411 Ribosomal protein S11 KD35_RS02110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KD35_RS02110 PF01000 RNA polymerase Rpb3/RpoA insert domain KD35_RS02110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KD35_RS02115 PF01196 Ribosomal protein L17 KD35_RS02120 PF00005 ABC transporter KD35_RS02125 PF00005 ABC transporter KD35_RS02130 PF02361 Cobalt transport protein KD35_RS02135 PF01416 tRNA pseudouridine synthase KD35_RS02140 PF00572 Ribosomal protein L13 KD35_RS02145 PF00380 Ribosomal protein S9/S16 KD35_RS02155 PF01520 N-acetylmuramoyl-L-alanine amidase KD35_RS02160 PF10609 NUBPL iron-transfer P-loop NTPase KD35_RS02165 PF17898 Spore germination GerD central core domain KD35_RS02170 PF14089 KinB-signalling pathway activation in sporulation KD35_RS02175 PF01522 Polysaccharide deacetylase KD35_RS02245 PF02595 Glycerate kinase family KD35_RS02250 PF02595 Glycerate kinase family KD35_RS02255 PF00491 Arginase family KD35_RS02260 PF02457 DisA bacterial checkpoint controller nucleotide-binding KD35_RS02265 PF07949 YbbR-like protein KD35_RS02270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KD35_RS02270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KD35_RS02270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KD35_RS02270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KD35_RS02280 PF01380 SIS domain KD35_RS02285 PF00561 alpha/beta hydrolase fold KD35_RS02290 PF00392 Bacterial regulatory proteins, gntR family KD35_RS02290 PF07729 FCD domain KD35_RS02300 PF02447 GntP family permease KD35_RS02305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KD35_RS02305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KD35_RS02310 PF07676 WD40-like Beta Propeller Repeat KD35_RS02310 PF00326 Prolyl oligopeptidase family KD35_RS02350 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02355 PF09383 NIL domain KD35_RS02355 PF00005 ABC transporter KD35_RS02360 PF03180 NLPA lipoprotein KD35_RS02365 PF00107 Zinc-binding dehydrogenase KD35_RS02365 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS02375 PF01565 FAD binding domain KD35_RS02380 PF07690 Major Facilitator Superfamily KD35_RS02390 PF07690 Major Facilitator Superfamily KD35_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02410 PF12911 N-terminal TM domain of oligopeptide transport permease C KD35_RS02410 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS02415 PF00005 ABC transporter KD35_RS02420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS02420 PF00005 ABC transporter KD35_RS02425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS02435 PF12833 Helix-turn-helix domain KD35_RS02450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS02455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS02460 PF00248 Aldo/keto reductase family KD35_RS02465 PF14748 Pyrroline-5-carboxylate reductase dimerisation KD35_RS02465 PF03807 NADP oxidoreductase coenzyme F420-dependent KD35_RS02475 PF04973 Nicotinamide mononucleotide transporter KD35_RS02480 PF06800 Sugar transport protein KD35_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02500 PF12727 PBP superfamily domain KD35_RS02500 PF12728 Helix-turn-helix domain KD35_RS02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS02515 PF03466 LysR substrate binding domain KD35_RS02520 PF00892 EamA-like transporter family KD35_RS02525 PF14142 YrzO-like protein KD35_RS02530 PF01553 Acyltransferase KD35_RS02540 PF00356 Bacterial regulatory proteins, lacI family KD35_RS02540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KD35_RS02550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS02550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS02565 PF01026 TatD related DNase KD35_RS02570 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KD35_RS02595 PF12848 ABC transporter KD35_RS02595 PF16326 ABC transporter C-terminal domain KD35_RS02595 PF00005 ABC transporter KD35_RS02610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS02615 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02620 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS02620 PF12911 N-terminal TM domain of oligopeptide transport permease C KD35_RS02625 PF00005 ABC transporter KD35_RS02625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS02630 PF00005 ABC transporter KD35_RS02630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS02670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS02675 PF01557 Fumarylacetoacetate (FAA) hydrolase family KD35_RS02685 PF07690 Major Facilitator Superfamily KD35_RS02690 PF01820 D-ala D-ala ligase N-terminus KD35_RS02690 PF07478 D-ala D-ala ligase C-terminus KD35_RS02695 PF01820 D-ala D-ala ligase N-terminus KD35_RS02695 PF07478 D-ala D-ala ligase C-terminus KD35_RS02700 PF01225 Mur ligase family, catalytic domain KD35_RS02700 PF08245 Mur ligase middle domain KD35_RS02700 PF02875 Mur ligase family, glutamate ligase domain KD35_RS02705 PF00271 Helicase conserved C-terminal domain KD35_RS02705 PF00270 DEAD/DEAH box helicase KD35_RS02710 PF03851 UV-endonuclease UvdE KD35_RS02715 PF01694 Rhomboid family KD35_RS02720 PF01648 4'-phosphopantetheinyl transferase superfamily KD35_RS02730 PF00842 Alanine racemase, C-terminal domain KD35_RS02730 PF01168 Alanine racemase, N-terminal domain KD35_RS02735 PF01402 Ribbon-helix-helix protein, copG family KD35_RS02740 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KD35_RS02745 PF00575 S1 RNA binding domain KD35_RS02745 PF09371 Tex-like protein N-terminal domain KD35_RS02745 PF16921 Tex protein YqgF-like domain KD35_RS02745 PF17674 HHH domain KD35_RS02755 PF10263 SprT-like family KD35_RS02755 PF17283 SprT-like zinc ribbon domain KD35_RS02840 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KD35_RS02845 PF00814 Glycoprotease family KD35_RS02850 PF00583 Acetyltransferase (GNAT) family KD35_RS02855 PF00814 Glycoprotease family KD35_RS02860 PF12848 ABC transporter KD35_RS02860 PF00005 ABC transporter KD35_RS02860 PF16326 ABC transporter C-terminal domain KD35_RS02865 PF06971 Putative DNA-binding protein N-terminus KD35_RS02865 PF02629 CoA binding domain KD35_RS02875 PF02517 CPBP intramembrane metalloprotease KD35_RS02880 PF00166 Chaperonin 10 Kd subunit KD35_RS02885 PF00118 TCP-1/cpn60 chaperonin family KD35_RS02890 PF02540 NAD synthase KD35_RS02890 PF00958 GMP synthase C terminal domain KD35_RS02890 PF00117 Glutamine amidotransferase class-I KD35_RS02895 PF00860 Permease family KD35_RS02900 PF00486 Transcriptional regulatory protein, C terminal KD35_RS02900 PF00072 Response regulator receiver domain KD35_RS02905 PF00989 PAS fold KD35_RS02905 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS02905 PF16736 Single Cache-like KD35_RS02925 PF05045 Rhamnan synthesis protein F KD35_RS02925 PF14307 Glycosyltransferase WbsX KD35_RS02935 PF08241 Methyltransferase domain KD35_RS02975 PF02673 Bacitracin resistance protein BacA KD35_RS02985 PF00005 ABC transporter KD35_RS02990 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS02995 PF00072 Response regulator receiver domain KD35_RS02995 PF00486 Transcriptional regulatory protein, C terminal KD35_RS03015 PF00731 AIR carboxylase KD35_RS03020 PF02222 ATP-grasp domain KD35_RS03020 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KD35_RS03025 PF00206 Lyase KD35_RS03025 PF10397 Adenylosuccinate lyase C-terminus KD35_RS03030 PF01259 SAICAR synthetase KD35_RS03035 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KD35_RS03045 PF02769 AIR synthase related protein, C-terminal domain KD35_RS03045 PF00586 AIR synthase related protein, N-terminal domain KD35_RS03045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KD35_RS03050 PF00156 Phosphoribosyl transferase domain KD35_RS03055 PF02769 AIR synthase related protein, C-terminal domain KD35_RS03055 PF00586 AIR synthase related protein, N-terminal domain KD35_RS03060 PF00551 Formyl transferase KD35_RS03065 PF02142 MGS-like domain KD35_RS03065 PF01808 AICARFT/IMPCHase bienzyme KD35_RS03070 PF02843 Phosphoribosylglycinamide synthetase, C domain KD35_RS03070 PF02844 Phosphoribosylglycinamide synthetase, N domain KD35_RS03070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KD35_RS03090 PF01884 PcrB family KD35_RS03095 PF13361 UvrD-like helicase C-terminal domain KD35_RS03095 PF00580 UvrD/REP helicase N-terminal domain KD35_RS03100 PF12826 Helix-hairpin-helix motif KD35_RS03100 PF01653 NAD-dependent DNA ligase adenylation domain KD35_RS03100 PF03120 NAD-dependent DNA ligase OB-fold domain KD35_RS03100 PF00533 BRCA1 C Terminus (BRCT) domain KD35_RS03100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KD35_RS03105 PF07537 CamS sex pheromone cAM373 precursor KD35_RS03110 PF01925 Sulfite exporter TauE/SafE KD35_RS03115 PF00171 Aldehyde dehydrogenase family KD35_RS03125 PF00857 Isochorismatase family KD35_RS03130 PF09383 NIL domain KD35_RS03130 PF00005 ABC transporter KD35_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS03140 PF03180 NLPA lipoprotein KD35_RS03160 PF01047 MarR family KD35_RS03170 PF02686 Glu-tRNAGln amidotransferase C subunit KD35_RS03175 PF01425 Amidase KD35_RS03180 PF02637 GatB domain KD35_RS03180 PF02934 GatB/GatE catalytic domain KD35_RS03185 PF00781 Diacylglycerol kinase catalytic domain KD35_RS03190 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS03195 PF00202 Aminotransferase class-III KD35_RS03200 PF00158 Sigma-54 interaction domain KD35_RS03205 PF00171 Aldehyde dehydrogenase family KD35_RS03210 PF00893 Small Multidrug Resistance protein KD35_RS03215 PF02073 Thermophilic metalloprotease (M29) KD35_RS03230 PF07670 Nucleoside recognition KD35_RS03230 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS03230 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS03235 PF05958 tRNA (Uracil-5-)-methyltransferase KD35_RS03235 PF01938 TRAM domain KD35_RS03235 PF02475 Met-10+ like-protein KD35_RS03240 PF01207 Dihydrouridine synthase (Dus) KD35_RS03250 PF07308 Protein of unknown function (DUF1456) KD35_RS03265 PF13378 Enolase C-terminal domain-like KD35_RS03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KD35_RS03275 PF03553 Na+/H+ antiporter family KD35_RS03280 PF07687 Peptidase dimerisation domain KD35_RS03280 PF01546 Peptidase family M20/M25/M40 KD35_RS03290 PF13192 Thioredoxin domain KD35_RS03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS03295 PF00578 AhpC/TSA family KD35_RS03300 PF01636 Phosphotransferase enzyme family KD35_RS03305 PF01008 Initiation factor 2 subunit family KD35_RS03310 PF00596 Class II Aldolase and Adducin N-terminal domain KD35_RS03315 PF01032 FecCD transport family KD35_RS03320 PF01032 FecCD transport family KD35_RS03325 PF01497 Periplasmic binding protein KD35_RS03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS03345 PF12728 Helix-turn-helix domain KD35_RS03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS03380 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS03380 PF00989 PAS fold KD35_RS03380 PF13188 PAS domain KD35_RS03380 PF13426 PAS domain KD35_RS03400 PF10127 RNA repair pathway DNA polymerase beta family KD35_RS03405 PF07690 Major Facilitator Superfamily KD35_RS03410 PF01266 FAD dependent oxidoreductase KD35_RS03410 PF00355 Rieske [2Fe-2S] domain KD35_RS03420 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KD35_RS03430 PF00005 ABC transporter KD35_RS03440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS03440 PF00672 HAMP domain KD35_RS03440 PF12729 Four helix bundle sensory module for signal transduction KD35_RS03445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS03445 PF00672 HAMP domain KD35_RS03445 PF12729 Four helix bundle sensory module for signal transduction KD35_RS03450 PF00128 Alpha amylase, catalytic domain KD35_RS03450 PF16657 Maltogenic Amylase, C-terminal domain KD35_RS03455 PF00367 phosphotransferase system, EIIB KD35_RS03455 PF02378 Phosphotransferase system, EIIC KD35_RS03455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KD35_RS03460 PF03372 Endonuclease/Exonuclease/phosphatase family KD35_RS03465 PF01061 ABC-2 type transporter KD35_RS03470 PF01751 Toprim domain KD35_RS03470 PF01131 DNA topoisomerase KD35_RS03475 PF02110 Hydroxyethylthiazole kinase family KD35_RS03480 PF02581 Thiamine monophosphate synthase KD35_RS03485 PF03605 Anaerobic c4-dicarboxylate membrane transporter KD35_RS03490 PF00672 HAMP domain KD35_RS03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS03495 PF01910 Thiamine-binding protein KD35_RS03500 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS03510 PF00005 ABC transporter KD35_RS03515 PF12848 ABC transporter KD35_RS03515 PF00005 ABC transporter KD35_RS03520 PF00704 Glycosyl hydrolases family 18 KD35_RS03520 PF00041 Fibronectin type III domain KD35_RS03540 PF08360 QacR-like protein, C-terminal region KD35_RS03540 PF00440 Bacterial regulatory proteins, tetR family KD35_RS03560 PF11700 Vacuole effluxer Atg22 like KD35_RS03575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS03575 PF09180 Prolyl-tRNA synthetase, C-terminal KD35_RS03575 PF03129 Anticodon binding domain KD35_RS03585 PF00480 ROK family KD35_RS03590 PF02342 TerD domain KD35_RS03595 PF02342 TerD domain KD35_RS03600 PF02342 TerD domain KD35_RS03605 PF03741 Integral membrane protein TerC family KD35_RS03610 PF14266 Putative component of 'biosynthetic module' KD35_RS03615 PF05816 Toxic anion resistance protein (TelA) KD35_RS03620 PF00690 Cation transporter/ATPase, N-terminus KD35_RS03620 PF00689 Cation transporting ATPase, C-terminus KD35_RS03625 PF06569 Protein of unknown function (DUF1128) KD35_RS03630 PF01451 Low molecular weight phosphotyrosine protein phosphatase KD35_RS03640 PF03631 Virulence factor BrkB KD35_RS03650 PF00892 EamA-like transporter family KD35_RS03670 PF09335 SNARE associated Golgi protein KD35_RS03685 PF16242 Pyridoxamine 5'-phosphate oxidase like KD35_RS03690 PF01699 Sodium/calcium exchanger protein KD35_RS03695 PF14167 YfkD-like protein KD35_RS03700 PF08756 YfkB-like domain KD35_RS03700 PF04055 Radical SAM superfamily KD35_RS03710 PF05683 Fumarase C-terminus KD35_RS03710 PF05681 Fumarate hydratase (Fumerase) KD35_RS03715 PF01522 Polysaccharide deacetylase KD35_RS03725 PF00730 HhH-GPD superfamily base excision DNA repair protein KD35_RS03730 PF05958 tRNA (Uracil-5-)-methyltransferase KD35_RS03730 PF01938 TRAM domain KD35_RS03735 PF14659 Phage integrase, N-terminal SAM-like domain KD35_RS03735 PF00589 Phage integrase family KD35_RS03740 PF01381 Helix-turn-helix KD35_RS03755 PF01381 Helix-turn-helix KD35_RS03790 PF07319 Primosomal protein DnaI N-terminus KD35_RS03790 PF01695 IstB-like ATP binding protein KD35_RS03885 PF00589 Phage integrase family KD35_RS03890 PF00589 Phage integrase family KD35_RS04005 PF01183 Glycosyl hydrolases family 25 KD35_RS04015 PF01416 tRNA pseudouridine synthase KD35_RS04025 PF00158 Sigma-54 interaction domain KD35_RS04025 PF02954 Bacterial regulatory protein, Fis family KD35_RS04025 PF13426 PAS domain KD35_RS04035 PF00324 Amino acid permease KD35_RS04040 PF07687 Peptidase dimerisation domain KD35_RS04040 PF01546 Peptidase family M20/M25/M40 KD35_RS04070 PF04960 Glutaminase KD35_RS04075 PF02378 Phosphotransferase system, EIIC KD35_RS04075 PF00367 phosphotransferase system, EIIB KD35_RS04080 PF00144 Beta-lactamase KD35_RS04095 PF00535 Glycosyl transferase family 2 KD35_RS04100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS04100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS04100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS04105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS04105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS04105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS04110 PF00551 Formyl transferase KD35_RS04110 PF01370 NAD dependent epimerase/dehydratase family KD35_RS04110 PF02911 Formyl transferase, C-terminal domain KD35_RS04115 PF00535 Glycosyl transferase family 2 KD35_RS04125 PF02901 Pyruvate formate lyase-like KD35_RS04125 PF01228 Glycine radical KD35_RS04130 PF04055 Radical SAM superfamily KD35_RS04135 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KD35_RS04135 PF04101 Glycosyltransferase family 28 C-terminal domain KD35_RS04150 PF01979 Amidohydrolase family KD35_RS04155 PF01370 NAD dependent epimerase/dehydratase family KD35_RS04155 PF08338 Domain of unknown function (DUF1731) KD35_RS04160 PF02631 RecX family KD35_RS04175 PF08176 Small acid-soluble spore protein K family KD35_RS04180 PF14043 WVELL protein KD35_RS04185 PF04307 LexA-binding, inner membrane-associated putative hydrolase KD35_RS04190 PF14815 NUDIX domain KD35_RS04190 PF00730 HhH-GPD superfamily base excision DNA repair protein KD35_RS04200 PF04259 Small, acid-soluble spore protein, gamma-type KD35_RS04205 PF14182 YgaB-like protein KD35_RS04210 PF04167 Protein of unknown function (DUF402) KD35_RS04215 PF00664 ABC transporter transmembrane region KD35_RS04215 PF00005 ABC transporter KD35_RS04220 PF06081 Aromatic acid exporter family member 1 KD35_RS04225 PF01645 Conserved region in glutamate synthase KD35_RS04225 PF01493 GXGXG motif KD35_RS04225 PF00310 Glutamine amidotransferases class-II KD35_RS04225 PF04898 Glutamate synthase central domain KD35_RS04230 PF00202 Aminotransferase class-III KD35_RS04235 PF00005 ABC transporter KD35_RS04250 PF07885 Ion channel KD35_RS04255 PF00578 AhpC/TSA family KD35_RS04260 PF01475 Ferric uptake regulator family KD35_RS04265 PF11023 Zinc-ribbon containing domain KD35_RS04365 PF01709 Transcriptional regulator KD35_RS04370 PF00293 NUDIX domain KD35_RS04370 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS04375 PF00912 Transglycosylase KD35_RS04375 PF00905 Penicillin binding protein transpeptidase domain KD35_RS04380 PF13462 Thioredoxin KD35_RS04390 PF08331 Domain of unknown function (DUF1730) KD35_RS04395 PF12671 Putative amidase domain KD35_RS04400 PF00588 SpoU rRNA Methylase family KD35_RS04405 PF00563 EAL domain KD35_RS04405 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS04405 PF03707 Bacterial signalling protein N terminal repeat KD35_RS04415 PF08298 PrkA AAA domain KD35_RS04415 PF06798 PrkA serine protein kinase C-terminal domain KD35_RS04425 PF04285 Protein of unknown function (DUF444) KD35_RS04440 PF02028 BCCT, betaine/carnitine/choline family transporter KD35_RS04445 PF18496 Collagenase G catalytic helper subdomain KD35_RS04445 PF08453 Peptidase family M9 N-terminal KD35_RS04445 PF01752 Collagenase KD35_RS04455 PF15975 Flotillin KD35_RS04455 PF01145 SPFH domain / Band 7 family KD35_RS04460 PF00672 HAMP domain KD35_RS04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS04460 PF02743 Cache domain KD35_RS04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS04465 PF17203 Single cache domain 3 KD35_RS04465 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KD35_RS04465 PF00989 PAS fold KD35_RS04470 PF00072 Response regulator receiver domain KD35_RS04470 PF08279 HTH domain KD35_RS04470 PF12431 Transcriptional regulator KD35_RS04475 PF03600 Citrate transporter KD35_RS04495 PF04309 Glycerol-3-phosphate responsive antiterminator KD35_RS04500 PF17912 MalK OB fold domain KD35_RS04500 PF00005 ABC transporter KD35_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04515 PF13416 Bacterial extracellular solute-binding protein KD35_RS04520 PF00149 Calcineurin-like phosphoesterase KD35_RS04525 PF00072 Response regulator receiver domain KD35_RS04525 PF00486 Transcriptional regulatory protein, C terminal KD35_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS04530 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS04540 PF13529 Peptidase_C39 like family KD35_RS04545 PF00672 HAMP domain KD35_RS04545 PF02743 Cache domain KD35_RS04545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS04550 PF17203 Single cache domain 3 KD35_RS04550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KD35_RS04550 PF00989 PAS fold KD35_RS04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS04555 PF00072 Response regulator receiver domain KD35_RS04560 PF03390 2-hydroxycarboxylate transporter family KD35_RS04565 PF00390 Malic enzyme, N-terminal domain KD35_RS04565 PF03949 Malic enzyme, NAD binding domain KD35_RS04575 PF00892 EamA-like transporter family KD35_RS04580 PF00392 Bacterial regulatory proteins, gntR family KD35_RS04580 PF00155 Aminotransferase class I and II KD35_RS04590 PF00672 HAMP domain KD35_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS04590 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS04590 PF00989 PAS fold KD35_RS04590 PF18698 Histidine kinase sensor domain KD35_RS04595 PF00072 Response regulator receiver domain KD35_RS04595 PF00486 Transcriptional regulatory protein, C terminal KD35_RS04605 PF13508 Acetyltransferase (GNAT) domain KD35_RS04605 PF00583 Acetyltransferase (GNAT) family KD35_RS04610 PF02634 FdhD/NarQ family KD35_RS04615 PF00384 Molybdopterin oxidoreductase KD35_RS04615 PF00037 4Fe-4S binding domain KD35_RS04615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KD35_RS04615 PF01568 Molydopterin dinucleotide binding domain KD35_RS04615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KD35_RS04620 PF07849 Protein of unknown function (DUF1641) KD35_RS04630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KD35_RS04630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KD35_RS04635 PF13520 Amino acid permease KD35_RS04640 PF01022 Bacterial regulatory protein, arsR family KD35_RS04645 PF00403 Heavy-metal-associated domain KD35_RS04650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KD35_RS04650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KD35_RS04650 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KD35_RS04660 PF01447 Thermolysin metallopeptidase, catalytic domain KD35_RS04660 PF07504 Fungalysin/Thermolysin Propeptide Motif KD35_RS04660 PF03413 Peptidase propeptide and YPEB domain KD35_RS04660 PF02868 Thermolysin metallopeptidase, alpha-helical domain KD35_RS04680 PF04294 VanW like protein KD35_RS04685 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS04690 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS04690 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS04695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS04700 PF03471 Transporter associated domain KD35_RS04700 PF01595 Cyclin M transmembrane N-terminal domain KD35_RS04700 PF00571 CBS domain KD35_RS04705 PF00206 Lyase KD35_RS04705 PF10415 Fumarase C C-terminus KD35_RS04710 PF02652 L-lactate permease KD35_RS04715 PF01022 Bacterial regulatory protein, arsR family KD35_RS04720 PF08141 Small acid-soluble spore protein H family KD35_RS04725 PF00854 POT family KD35_RS04730 PF01497 Periplasmic binding protein KD35_RS04735 PF01032 FecCD transport family KD35_RS04740 PF01032 FecCD transport family KD35_RS04745 PF00005 ABC transporter KD35_RS04750 PF08241 Methyltransferase domain KD35_RS04755 PF00155 Aminotransferase class I and II KD35_RS04760 PF01370 NAD dependent epimerase/dehydratase family KD35_RS04765 PF00293 NUDIX domain KD35_RS04765 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS04770 PF00092 von Willebrand factor type A domain KD35_RS04775 PF07728 AAA domain (dynein-related subfamily) KD35_RS04780 PF13396 Phospholipase_D-nuclease N-terminal KD35_RS04780 PF13091 PLD-like domain KD35_RS04795 PF00563 EAL domain KD35_RS04795 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS04795 PF03707 Bacterial signalling protein N terminal repeat KD35_RS04800 PF13520 Amino acid permease KD35_RS04805 PF07702 UTRA domain KD35_RS04805 PF00392 Bacterial regulatory proteins, gntR family KD35_RS04810 PF00367 phosphotransferase system, EIIB KD35_RS04810 PF02378 Phosphotransferase system, EIIC KD35_RS04815 PF16657 Maltogenic Amylase, C-terminal domain KD35_RS04815 PF00128 Alpha amylase, catalytic domain KD35_RS04830 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS04840 PF01636 Phosphotransferase enzyme family KD35_RS04845 PF01235 Sodium:alanine symporter family KD35_RS04850 PF00005 ABC transporter KD35_RS04855 PF00497 Bacterial extracellular solute-binding proteins, family 3 KD35_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04865 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04870 PF00324 Amino acid permease KD35_RS04895 PF08279 HTH domain KD35_RS04895 PF13280 WYL domain KD35_RS04900 PF01872 RibD C-terminal domain KD35_RS04905 PF00672 HAMP domain KD35_RS04905 PF00989 PAS fold KD35_RS04905 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS04905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS04905 PF18698 Histidine kinase sensor domain KD35_RS04910 PF00486 Transcriptional regulatory protein, C terminal KD35_RS04910 PF00072 Response regulator receiver domain KD35_RS04920 PF00916 Sulfate permease family KD35_RS04920 PF01740 STAS domain KD35_RS04925 PF00582 Universal stress protein family KD35_RS04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS04950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS04950 PF00005 ABC transporter KD35_RS04955 PF00005 ABC transporter KD35_RS04955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS04960 PF07690 Major Facilitator Superfamily KD35_RS04965 PF01047 MarR family KD35_RS04970 PF07690 Major Facilitator Superfamily KD35_RS04975 PF07690 Major Facilitator Superfamily KD35_RS04980 PF00356 Bacterial regulatory proteins, lacI family KD35_RS04985 PF00294 pfkB family carbohydrate kinase KD35_RS04990 PF05025 RbsD / FucU transport protein family KD35_RS04995 PF00005 ABC transporter KD35_RS05000 PF02653 Branched-chain amino acid transport system / permease component KD35_RS05005 PF13407 Periplasmic binding protein domain KD35_RS05010 PF00923 Transaldolase/Fructose-6-phosphate aldolase KD35_RS05015 PF05547 Immune inhibitor A peptidase M6 KD35_RS05030 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS05030 PF00107 Zinc-binding dehydrogenase KD35_RS05040 PF00882 Zinc dependent phospholipase C KD35_RS05045 PF03372 Endonuclease/Exonuclease/phosphatase family KD35_RS05070 PF02673 Bacitracin resistance protein BacA KD35_RS05075 PF00672 HAMP domain KD35_RS05075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS05075 PF02743 Cache domain KD35_RS05080 PF06725 3D domain KD35_RS05080 PF01476 LysM domain KD35_RS05085 PF01381 Helix-turn-helix KD35_RS05095 PF04203 Sortase domain KD35_RS05100 PF00854 POT family KD35_RS05105 PF05525 Branched-chain amino acid transport protein KD35_RS05120 PF00324 Amino acid permease KD35_RS05125 PF00860 Permease family KD35_RS05150 PF02080 TrkA-C domain KD35_RS05150 PF00999 Sodium/hydrogen exchanger family KD35_RS05150 PF02254 TrkA-N domain KD35_RS05160 PF00510 Cytochrome c oxidase subunit III KD35_RS05165 PF00115 Cytochrome C and Quinol oxidase polypeptide I KD35_RS05170 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KD35_RS05175 PF00324 Amino acid permease KD35_RS05180 PF13529 Peptidase_C39 like family KD35_RS05185 PF07687 Peptidase dimerisation domain KD35_RS05185 PF01546 Peptidase family M20/M25/M40 KD35_RS05190 PF11755 Protein of unknown function (DUF3311) KD35_RS05195 PF00474 Sodium:solute symporter family KD35_RS05200 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS05205 PF03845 Spore germination protein KD35_RS05210 PF05504 Spore germination B3/ GerAC like, C-terminal KD35_RS05220 PF02421 Ferrous iron transport protein B KD35_RS05220 PF17910 FeoB cytosolic helical domain KD35_RS05220 PF07664 Ferrous iron transport protein B C terminus KD35_RS05220 PF07670 Nucleoside recognition KD35_RS05225 PF07670 Nucleoside recognition KD35_RS05225 PF07664 Ferrous iron transport protein B C terminus KD35_RS05225 PF17910 FeoB cytosolic helical domain KD35_RS05225 PF02421 Ferrous iron transport protein B KD35_RS05230 PF04023 FeoA domain KD35_RS05230 PF07664 Ferrous iron transport protein B C terminus KD35_RS05230 PF17910 FeoB cytosolic helical domain KD35_RS05230 PF02421 Ferrous iron transport protein B KD35_RS05230 PF07670 Nucleoside recognition KD35_RS05235 PF12849 PBP superfamily domain KD35_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS05255 PF00873 AcrB/AcrD/AcrF family KD35_RS05375 PF00571 CBS domain KD35_RS05395 PF08239 Bacterial SH3 domain KD35_RS05395 PF00246 Zinc carboxypeptidase KD35_RS05400 PF03070 TENA/THI-4/PQQC family KD35_RS05405 PF00005 ABC transporter KD35_RS05410 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS05415 PF09084 NMT1/THI5 like KD35_RS05420 PF02581 Thiamine monophosphate synthase KD35_RS05425 PF01266 FAD dependent oxidoreductase KD35_RS05430 PF02597 ThiS family KD35_RS05435 PF05690 Thiazole biosynthesis protein ThiG KD35_RS05440 PF00899 ThiF family KD35_RS05445 PF08543 Phosphomethylpyrimidine kinase KD35_RS05475 PF03814 Potassium-transporting ATPase A subunit KD35_RS05485 PF02669 K+-transporting ATPase, c chain KD35_RS05490 PF02702 Osmosensitive K+ channel His kinase sensor domain KD35_RS05495 PF07690 Major Facilitator Superfamily KD35_RS05500 PF01047 MarR family KD35_RS05515 PF00860 Permease family KD35_RS05535 PF00294 pfkB family carbohydrate kinase KD35_RS05545 PF00367 phosphotransferase system, EIIB KD35_RS05545 PF02378 Phosphotransferase system, EIIC KD35_RS05550 PF13407 Periplasmic binding protein domain KD35_RS05550 PF00356 Bacterial regulatory proteins, lacI family KD35_RS05560 PF00085 Thioredoxin KD35_RS05565 PF02600 Disulfide bond formation protein DsbB KD35_RS05570 PF14148 YhdB-like protein KD35_RS05590 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS05605 PF00881 Nitroreductase family KD35_RS05610 PF04293 SpoVR like protein KD35_RS05635 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS05635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS05640 PF02583 Metal-sensitive transcriptional repressor KD35_RS05645 PF01206 Sulfurtransferase TusA KD35_RS05645 PF00581 Rhodanese-like domain KD35_RS05650 PF00753 Metallo-beta-lactamase superfamily KD35_RS05650 PF00581 Rhodanese-like domain KD35_RS05655 PF01206 Sulfurtransferase TusA KD35_RS05660 PF00581 Rhodanese-like domain KD35_RS05670 PF13686 DsrE/DsrF/DrsH-like family KD35_RS05675 PF01925 Sulfite exporter TauE/SafE KD35_RS05685 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS05690 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS05690 PF00107 Zinc-binding dehydrogenase KD35_RS05695 PF02690 Na+/Pi-cotransporter KD35_RS05700 PF07690 Major Facilitator Superfamily KD35_RS05710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KD35_RS05710 PF00874 PRD domain KD35_RS05710 PF05043 Mga helix-turn-helix domain KD35_RS05710 PF08279 HTH domain KD35_RS05715 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KD35_RS05720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KD35_RS05725 PF02378 Phosphotransferase system, EIIC KD35_RS05740 PF01476 LysM domain KD35_RS05740 PF06725 3D domain KD35_RS05745 PF12704 MacB-like periplasmic core domain KD35_RS05745 PF02687 FtsX-like permease family KD35_RS05750 PF00005 ABC transporter KD35_RS05760 PF09529 Integral membrane protein (intg_mem_TP0381) KD35_RS05775 PF05525 Branched-chain amino acid transport protein KD35_RS05780 PF05067 Manganese containing catalase KD35_RS05785 PF12652 CotJB protein KD35_RS05790 PF11007 Spore coat associated protein JA (CotJA) KD35_RS05805 PF02735 Ku70/Ku80 beta-barrel domain KD35_RS05815 PF09335 SNARE associated Golgi protein KD35_RS05850 PF13520 Amino acid permease KD35_RS05855 PF00999 Sodium/hydrogen exchanger family KD35_RS05865 PF01380 SIS domain KD35_RS05865 PF01418 Helix-turn-helix domain, rpiR family KD35_RS05870 PF01380 SIS domain KD35_RS05875 PF02378 Phosphotransferase system, EIIC KD35_RS05875 PF00367 phosphotransferase system, EIIB KD35_RS05885 PF07681 DoxX KD35_RS05900 PF00892 EamA-like transporter family KD35_RS05905 PF01037 Lrp/AsnC ligand binding domain KD35_RS05915 PF00893 Small Multidrug Resistance protein KD35_RS05920 PF00893 Small Multidrug Resistance protein KD35_RS05925 PF00440 Bacterial regulatory proteins, tetR family KD35_RS05925 PF17934 Tetracyclin repressor-like, C-terminal domain KD35_RS05930 PF07690 Major Facilitator Superfamily KD35_RS05935 PF01638 HxlR-like helix-turn-helix KD35_RS05945 PF02525 Flavodoxin-like fold KD35_RS05950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS05950 PF12793 Sugar transport-related sRNA regulator N-term KD35_RS05955 PF07690 Major Facilitator Superfamily KD35_RS05965 PF01965 DJ-1/PfpI family KD35_RS05970 PF18011 C-terminal domain found in long catalases KD35_RS05970 PF00199 Catalase KD35_RS05970 PF06628 Catalase-related immune-responsive KD35_RS05980 PF13520 Amino acid permease KD35_RS05985 PF01177 Asp/Glu/Hydantoin racemase KD35_RS05995 PF00171 Aldehyde dehydrogenase family KD35_RS06005 PF00005 ABC transporter KD35_RS06005 PF00664 ABC transporter transmembrane region KD35_RS06015 PF00497 Bacterial extracellular solute-binding proteins, family 3 KD35_RS06020 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS06025 PF00005 ABC transporter KD35_RS06030 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS06040 PF14398 YheC/D like ATP-grasp KD35_RS06050 PF04286 Protein of unknown function (DUF445) KD35_RS06055 PF06133 Control of competence regulator ComK, YlbF/YmcA KD35_RS06070 PF00205 Thiamine pyrophosphate enzyme, central domain KD35_RS06070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS06070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS06075 PF03306 Alpha-acetolactate decarboxylase KD35_RS06085 PF02245 Methylpurine-DNA glycosylase (MPG) KD35_RS06105 PF04055 Radical SAM superfamily KD35_RS06110 PF00501 AMP-binding enzyme KD35_RS06110 PF13193 AMP-binding enzyme C-terminal domain KD35_RS06120 PF00916 Sulfate permease family KD35_RS06120 PF01740 STAS domain KD35_RS06140 PF07516 SecA Wing and Scaffold domain KD35_RS06140 PF01043 SecA preprotein cross-linking domain KD35_RS06140 PF07517 SecA DEAD-like domain KD35_RS06145 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS06145 PF01943 Polysaccharide biosynthesis protein KD35_RS06155 PF02368 Bacterial Ig-like domain (group 2) KD35_RS06155 PF13205 Bacterial Ig-like domain KD35_RS06155 PF00395 S-layer homology domain KD35_RS06160 PF00395 S-layer homology domain KD35_RS06170 PF03062 MBOAT, membrane-bound O-acyltransferase family KD35_RS06175 PF03062 MBOAT, membrane-bound O-acyltransferase family KD35_RS06190 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS06210 PF05343 M42 glutamyl aminopeptidase KD35_RS06215 PF01520 N-acetylmuramoyl-L-alanine amidase KD35_RS06215 PF00395 S-layer homology domain KD35_RS06225 PF11121 Protein of unknown function (DUF2639) KD35_RS06230 PF05544 Proline racemase KD35_RS06235 PF02423 Ornithine cyclodeaminase/mu-crystallin family KD35_RS06240 PF18593 CdiI immunity protein KD35_RS06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS06275 PF12911 N-terminal TM domain of oligopeptide transport permease C KD35_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS06285 PF00005 ABC transporter KD35_RS06285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS06315 PF00083 Sugar (and other) transporter KD35_RS06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS06320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KD35_RS06325 PF00072 Response regulator receiver domain KD35_RS06325 PF08279 HTH domain KD35_RS06325 PF12431 Transcriptional regulator KD35_RS06330 PF03401 Tripartite tricarboxylate transporter family receptor KD35_RS06335 PF02342 TerD domain KD35_RS06360 PF13411 MerR HTH family regulatory protein KD35_RS06360 PF06445 GyrI-like small molecule binding domain KD35_RS06375 PF00772 DnaB-like helicase N terminal domain KD35_RS06375 PF03796 DnaB-like helicase C terminal domain KD35_RS06400 PF01925 Sulfite exporter TauE/SafE KD35_RS06415 PF07690 Major Facilitator Superfamily KD35_RS06465 PF00550 Phosphopantetheine attachment site KD35_RS06465 PF07993 Male sterility protein KD35_RS06470 PF00440 Bacterial regulatory proteins, tetR family KD35_RS06470 PF18665 Tetracyclin repressor-like, C-terminal domain KD35_RS06490 PF01066 CDP-alcohol phosphatidyltransferase KD35_RS06510 PF02733 Dak1 domain KD35_RS06525 PF02525 Flavodoxin-like fold KD35_RS06530 PF02082 Transcriptional regulator KD35_RS06555 PF01966 HD domain KD35_RS06555 PF00672 HAMP domain KD35_RS06575 PF00395 S-layer homology domain KD35_RS06600 PF11181 Heat induced stress protein YflT KD35_RS06605 PF05532 CsbD-like KD35_RS06620 PF01740 STAS domain KD35_RS06625 PF13581 Histidine kinase-like ATPase domain KD35_RS06630 PF04545 Sigma-70, region 4 KD35_RS06630 PF04539 Sigma-70 region 3 KD35_RS06630 PF04542 Sigma-70 region 2 KD35_RS06640 PF13426 PAS domain KD35_RS06640 PF07228 Stage II sporulation protein E (SpoIIE) KD35_RS06645 PF03705 CheR methyltransferase, all-alpha domain KD35_RS06645 PF01739 CheR methyltransferase, SAM binding domain KD35_RS06650 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS06650 PF01627 Hpt domain KD35_RS06650 PF00072 Response regulator receiver domain KD35_RS06650 PF00497 Bacterial extracellular solute-binding proteins, family 3 KD35_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS06675 PF01906 Putative heavy-metal-binding KD35_RS06690 PF00107 Zinc-binding dehydrogenase KD35_RS06690 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS06695 PF11121 Protein of unknown function (DUF2639) KD35_RS06710 PF00149 Calcineurin-like phosphoesterase KD35_RS06715 PF13514 AAA domain KD35_RS06720 PF07282 Putative transposase DNA-binding domain KD35_RS06720 PF01385 Probable transposase KD35_RS06720 PF12323 Helix-turn-helix domain KD35_RS06730 PF01336 OB-fold nucleic acid binding domain KD35_RS06730 PF01966 HD domain KD35_RS06735 PF00440 Bacterial regulatory proteins, tetR family KD35_RS06740 PF07690 Major Facilitator Superfamily KD35_RS06745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS06750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS06755 PF18801 response regulator aspartate phosphatase H, N terminal KD35_RS06760 PF08386 TAP-like protein KD35_RS06760 PF00561 alpha/beta hydrolase fold KD35_RS06780 PF04309 Glycerol-3-phosphate responsive antiterminator KD35_RS06785 PF00230 Major intrinsic protein KD35_RS06790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KD35_RS06790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KD35_RS06795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KD35_RS06795 PF01266 FAD dependent oxidoreductase KD35_RS06810 PF04542 Sigma-70 region 2 KD35_RS06810 PF08281 Sigma-70, region 4 KD35_RS06835 PF07690 Major Facilitator Superfamily KD35_RS06840 PF07690 Major Facilitator Superfamily KD35_RS06850 PF13538 UvrD-like helicase C-terminal domain KD35_RS06875 PF01047 MarR family KD35_RS06880 PF12732 YtxH-like protein KD35_RS06885 PF01230 HIT domain KD35_RS06890 PF00005 ABC transporter KD35_RS06895 PF05975 Bacterial ABC transporter protein EcsB KD35_RS06900 PF12787 EcsC protein family KD35_RS06905 PF17934 Tetracyclin repressor-like, C-terminal domain KD35_RS06905 PF00440 Bacterial regulatory proteins, tetR family KD35_RS06915 PF03703 Bacterial PH domain KD35_RS06925 PF03703 Bacterial PH domain KD35_RS06965 PF03703 Bacterial PH domain KD35_RS06970 PF03703 Bacterial PH domain KD35_RS06975 PF03992 Antibiotic biosynthesis monooxygenase KD35_RS06980 PF00905 Penicillin binding protein transpeptidase domain KD35_RS06980 PF00912 Transglycosylase KD35_RS06985 PF01208 Uroporphyrinogen decarboxylase (URO-D) KD35_RS06990 PF00762 Ferrochelatase KD35_RS06995 PF01593 Flavin containing amine oxidoreductase KD35_RS07020 PF03965 Penicillinase repressor KD35_RS07030 PF17932 Tetracyclin repressor-like, C-terminal domain KD35_RS07030 PF00440 Bacterial regulatory proteins, tetR family KD35_RS07060 PF00356 Bacterial regulatory proteins, lacI family KD35_RS07065 PF14149 YhfH-like protein KD35_RS07070 PF12706 Beta-lactamase superfamily domain KD35_RS07075 PF03099 Biotin/lipoate A/B protein ligase family KD35_RS07075 PF10437 Bacterial lipoate protein ligase C-terminus KD35_RS07085 PF00501 AMP-binding enzyme KD35_RS07085 PF13193 AMP-binding enzyme C-terminal domain KD35_RS07095 PF01520 N-acetylmuramoyl-L-alanine amidase KD35_RS07095 PF00395 S-layer homology domain KD35_RS07100 PF05593 RHS Repeat KD35_RS07115 PF05593 RHS Repeat KD35_RS07150 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KD35_RS07160 PF00149 Calcineurin-like phosphoesterase KD35_RS07165 PF01966 HD domain KD35_RS07175 PF08281 Sigma-70, region 4 KD35_RS07175 PF04542 Sigma-70 region 2 KD35_RS07180 PF12833 Helix-turn-helix domain KD35_RS07180 PF06445 GyrI-like small molecule binding domain KD35_RS07195 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS07200 PF00072 Response regulator receiver domain KD35_RS07200 PF00486 Transcriptional regulatory protein, C terminal KD35_RS07225 PF01435 Peptidase family M48 KD35_RS07225 PF16491 CAAX prenyl protease N-terminal, five membrane helices KD35_RS07230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS07230 PF00672 HAMP domain KD35_RS07230 PF02743 Cache domain KD35_RS07235 PF00892 EamA-like transporter family KD35_RS07240 PF00395 S-layer homology domain KD35_RS07240 PF03424 Carbohydrate binding domain (family 17/28) KD35_RS07240 PF00150 Cellulase (glycosyl hydrolase family 5) KD35_RS07250 PF00395 S-layer homology domain KD35_RS07255 PF01274 Malate synthase KD35_RS07260 PF00463 Isocitrate lyase family KD35_RS07270 PF00313 'Cold-shock' DNA-binding domain KD35_RS07285 PF06338 ComK protein KD35_RS07290 PF09335 SNARE associated Golgi protein KD35_RS07295 PF10502 Signal peptidase, peptidase S26 KD35_RS07300 PF13361 UvrD-like helicase C-terminal domain KD35_RS07300 PF12705 PD-(D/E)XK nuclease superfamily KD35_RS07305 PF13361 UvrD-like helicase C-terminal domain KD35_RS07305 PF12705 PD-(D/E)XK nuclease superfamily KD35_RS07305 PF00580 UvrD/REP helicase N-terminal domain KD35_RS07315 PF10676 Spore germination protein gerPA/gerPF KD35_RS07320 PF10970 Spore germination protein GerPE KD35_RS07330 PF10737 Spore germination protein GerPC KD35_RS07335 PF10803 Spore germination GerPB KD35_RS07340 PF10676 Spore germination protein gerPA/gerPF KD35_RS07345 PF09388 Spo0E like sporulation regulatory protein KD35_RS07350 PF01557 Fumarylacetoacetate (FAA) hydrolase family KD35_RS07360 PF00202 Aminotransferase class-III KD35_RS07365 PF07457 Protein of unknown function (DUF1516) KD35_RS07375 PF00733 Asparagine synthase KD35_RS07375 PF13537 Glutamine amidotransferase domain KD35_RS07380 PF00762 Ferrochelatase KD35_RS07385 PF06628 Catalase-related immune-responsive KD35_RS07385 PF00199 Catalase KD35_RS07390 PF00909 Ammonium Transporter Family KD35_RS07400 PF00128 Alpha amylase, catalytic domain KD35_RS07410 PF04461 Protein of unknown function (DUF520) KD35_RS07415 PF17783 CvfB-like winged helix domain KD35_RS07415 PF13509 S1 domain KD35_RS07425 PF00639 PPIC-type PPIASE domain KD35_RS07435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS07435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS07440 PF12758 Protein of unknown function (DUF3813) KD35_RS07460 PF14168 YjzC-like protein KD35_RS07465 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS07465 PF10431 C-terminal, D2-small domain, of ClpB protein KD35_RS07465 PF07724 AAA domain (Cdc48 subfamily) KD35_RS07465 PF02861 Clp amino terminal domain, pathogenicity island component KD35_RS07465 PF17871 AAA lid domain KD35_RS07485 PF10815 ComZ KD35_RS07490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KD35_RS07490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KD35_RS07495 PF00109 Beta-ketoacyl synthase, N-terminal domain KD35_RS07495 PF02801 Beta-ketoacyl synthase, C-terminal domain KD35_RS07500 PF10026 Predicted Zn-dependent protease (DUF2268) KD35_RS07505 PF12227 Protein of unknown function (DUF3603) KD35_RS07510 PF00579 tRNA synthetases class I (W and Y) KD35_RS07520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS07530 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS07530 PF12911 N-terminal TM domain of oligopeptide transport permease C KD35_RS07535 PF00005 ABC transporter KD35_RS07535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS07540 PF00005 ABC transporter KD35_RS07540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS07545 PF01554 MatE KD35_RS07550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS07565 PF03960 ArsC family KD35_RS07570 PF03741 Integral membrane protein TerC family KD35_RS07575 PF05389 Negative regulator of genetic competence (MecA) KD35_RS07580 PF13091 PLD-like domain KD35_RS07580 PF13396 Phospholipase_D-nuclease N-terminal KD35_RS07590 PF01432 Peptidase family M3 KD35_RS07590 PF08439 Oligopeptidase F KD35_RS07605 PF01152 Bacterial-like globin KD35_RS07610 PF01928 CYTH domain KD35_RS07620 PF04607 Region found in RelA / SpoT proteins KD35_RS07625 PF01513 ATP-NAD kinase KD35_RS07630 PF00849 RNA pseudouridylate synthase KD35_RS07640 PF00149 Calcineurin-like phosphoesterase KD35_RS07645 PF01098 Cell cycle protein KD35_RS07650 PF00535 Glycosyl transferase family 2 KD35_RS07655 PF08241 Methyltransferase domain KD35_RS07660 PF05711 Macrocin-O-methyltransferase (TylF) KD35_RS07670 PF00535 Glycosyl transferase family 2 KD35_RS07670 PF13181 Tetratricopeptide repeat KD35_RS07690 PF00483 Nucleotidyl transferase KD35_RS07695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KD35_RS07700 PF16363 GDP-mannose 4,6 dehydratase KD35_RS07705 PF04321 RmlD substrate binding domain KD35_RS07725 PF07098 Protein of unknown function (DUF1360) KD35_RS07745 PF13361 UvrD-like helicase C-terminal domain KD35_RS07745 PF00580 UvrD/REP helicase N-terminal domain KD35_RS07750 PF13673 Acetyltransferase (GNAT) domain KD35_RS07760 PF00756 Putative esterase KD35_RS07775 PF02368 Bacterial Ig-like domain (group 2) KD35_RS07780 PF00474 Sodium:solute symporter family KD35_RS07790 PF00425 chorismate binding enzyme KD35_RS07790 PF04715 Anthranilate synthase component I, N terminal region KD35_RS07795 PF00117 Glutamine amidotransferase class-I KD35_RS07795 PF02885 Glycosyl transferase family, helical bundle domain KD35_RS07795 PF00591 Glycosyl transferase family, a/b domain KD35_RS07800 PF02885 Glycosyl transferase family, helical bundle domain KD35_RS07800 PF00591 Glycosyl transferase family, a/b domain KD35_RS07805 PF00218 Indole-3-glycerol phosphate synthase KD35_RS07810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KD35_RS07815 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS07820 PF00290 Tryptophan synthase alpha chain KD35_RS07830 PF02652 L-lactate permease KD35_RS07835 PF10042 Uncharacterized conserved protein (DUF2278) KD35_RS07855 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS07855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS07885 PF00364 Biotin-requiring enzyme KD35_RS07885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KD35_RS07885 PF02817 e3 binding domain KD35_RS07890 PF16870 2-oxoglutarate dehydrogenase C-terminal KD35_RS07890 PF00676 Dehydrogenase E1 component KD35_RS07890 PF02779 Transketolase, pyrimidine binding domain KD35_RS07895 PF01381 Helix-turn-helix KD35_RS07955 PF13649 Methyltransferase domain KD35_RS07965 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS07965 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS07975 PF01381 Helix-turn-helix KD35_RS07975 PF08671 Anti-repressor SinI KD35_RS07985 PF05547 Immune inhibitor A peptidase M6 KD35_RS07990 PF00171 Aldehyde dehydrogenase family KD35_RS07995 PF08402 TOBE domain KD35_RS07995 PF00005 ABC transporter KD35_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS08010 PF13416 Bacterial extracellular solute-binding protein KD35_RS08020 PF03176 MMPL family KD35_RS08030 PF01479 S4 domain KD35_RS08030 PF00849 RNA pseudouridylate synthase KD35_RS08040 PF00188 Cysteine-rich secretory protein family KD35_RS08045 PF02754 Cysteine-rich domain KD35_RS08045 PF13183 4Fe-4S dicluster domain KD35_RS08050 PF01565 FAD binding domain KD35_RS08050 PF02913 FAD linked oxidases, C-terminal domain KD35_RS08055 PF05651 Putative sugar diacid recognition KD35_RS08055 PF17853 GGDEF-like domain KD35_RS08055 PF13556 PucR C-terminal helix-turn-helix domain KD35_RS08065 PF00486 Transcriptional regulatory protein, C terminal KD35_RS08065 PF00072 Response regulator receiver domain KD35_RS08070 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08070 PF00672 HAMP domain KD35_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08070 PF18698 Histidine kinase sensor domain KD35_RS08070 PF00989 PAS fold KD35_RS08075 PF07729 FCD domain KD35_RS08075 PF00392 Bacterial regulatory proteins, gntR family KD35_RS08080 PF02754 Cysteine-rich domain KD35_RS08085 PF02589 LUD domain KD35_RS08085 PF13183 4Fe-4S dicluster domain KD35_RS08085 PF11870 Domain of unknown function (DUF3390) KD35_RS08090 PF02589 LUD domain KD35_RS08095 PF01478 Type IV leader peptidase family KD35_RS08095 PF06750 Bacterial Peptidase A24 N-terminal domain KD35_RS08105 PF01226 Formate/nitrite transporter KD35_RS08110 PF03741 Integral membrane protein TerC family KD35_RS08115 PF02386 Cation transport protein KD35_RS08120 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS08125 PF01575 MaoC like domain KD35_RS08150 PF00561 alpha/beta hydrolase fold KD35_RS08155 PF01266 FAD dependent oxidoreductase KD35_RS08160 PF02386 Cation transport protein KD35_RS08185 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS08190 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS08195 PF00266 Aminotransferase class-V KD35_RS08205 PF08220 DeoR-like helix-turn-helix domain KD35_RS08205 PF00455 DeoR C terminal sensor domain KD35_RS08230 PF04748 Divergent polysaccharide deacetylase KD35_RS08235 PF09388 Spo0E like sporulation regulatory protein KD35_RS08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08240 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08240 PF02743 Cache domain KD35_RS08245 PF01047 MarR family KD35_RS08255 PF12867 DinB superfamily KD35_RS08265 PF00989 PAS fold KD35_RS08265 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08265 PF13426 PAS domain KD35_RS08265 PF13188 PAS domain KD35_RS08270 PF06508 Queuosine biosynthesis protein QueC KD35_RS08275 PF01242 6-pyruvoyl tetrahydropterin synthase KD35_RS08280 PF04055 Radical SAM superfamily KD35_RS08285 PF14489 QueF-like protein KD35_RS08290 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KD35_RS08325 PF07972 NrdI Flavodoxin like KD35_RS08340 PF02867 Ribonucleotide reductase, barrel domain KD35_RS08340 PF08343 Ribonucleotide reductase N-terminal KD35_RS08340 PF00317 Ribonucleotide reductase, all-alpha domain KD35_RS08345 PF00268 Ribonucleotide reductase, small chain KD35_RS08350 PF00392 Bacterial regulatory proteins, gntR family KD35_RS08355 PF00005 ABC transporter KD35_RS08365 PF00005 ABC transporter KD35_RS08385 PF01037 Lrp/AsnC ligand binding domain KD35_RS08395 PF00857 Isochorismatase family KD35_RS08405 PF02016 LD-carboxypeptidase N-terminal domain KD35_RS08405 PF17676 LD-carboxypeptidase C-terminal domain KD35_RS08410 PF03060 Nitronate monooxygenase KD35_RS08415 PF04914 DltD protein KD35_RS08420 PF00550 Phosphopantetheine attachment site KD35_RS08425 PF03062 MBOAT, membrane-bound O-acyltransferase family KD35_RS08430 PF13193 AMP-binding enzyme C-terminal domain KD35_RS08430 PF00501 AMP-binding enzyme KD35_RS08440 PF01546 Peptidase family M20/M25/M40 KD35_RS08440 PF07687 Peptidase dimerisation domain KD35_RS08450 PF00258 Flavodoxin KD35_RS08465 PF01636 Phosphotransferase enzyme family KD35_RS08485 PF01554 MatE KD35_RS08490 PF02673 Bacitracin resistance protein BacA KD35_RS08505 PF01047 MarR family KD35_RS08515 PF00375 Sodium:dicarboxylate symporter family KD35_RS08520 PF02386 Cation transport protein KD35_RS08530 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KD35_RS08545 PF03698 Uncharacterised protein family (UPF0180) KD35_RS08560 PF01063 Amino-transferase class IV KD35_RS08565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS08565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS08565 PF00205 Thiamine pyrophosphate enzyme, central domain KD35_RS08570 PF10369 Small subunit of acetolactate synthase KD35_RS08570 PF01842 ACT domain KD35_RS08575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KD35_RS08575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KD35_RS08580 PF00682 HMGL-like KD35_RS08580 PF08502 LeuA allosteric (dimerisation) domain KD35_RS08585 PF00180 Isocitrate/isopropylmalate dehydrogenase KD35_RS08590 PF00330 Aconitase family (aconitate hydratase) KD35_RS08595 PF00694 Aconitase C-terminal domain KD35_RS08600 PF13393 Histidyl-tRNA synthetase KD35_RS08605 PF01634 ATP phosphoribosyltransferase KD35_RS08610 PF00815 Histidinol dehydrogenase KD35_RS08615 PF00475 Imidazoleglycerol-phosphate dehydratase KD35_RS08620 PF00117 Glutamine amidotransferase class-I KD35_RS08625 PF00977 Histidine biosynthesis protein KD35_RS08630 PF00977 Histidine biosynthesis protein KD35_RS08635 PF01502 Phosphoribosyl-AMP cyclohydrolase KD35_RS08640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KD35_RS08645 PF02811 PHP domain KD35_RS08655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KD35_RS08655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KD35_RS08660 PF01066 CDP-alcohol phosphatidyltransferase KD35_RS08665 PF00884 Sulfatase KD35_RS08675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KD35_RS08675 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KD35_RS08685 PF01507 Phosphoadenosine phosphosulfate reductase family KD35_RS08690 PF01747 ATP-sulfurylase KD35_RS08690 PF14306 PUA-like domain KD35_RS08700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KD35_RS08700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KD35_RS08710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KD35_RS08715 PF01903 CbiX KD35_RS08730 PF00209 Sodium:neurotransmitter symporter family KD35_RS08740 PF00375 Sodium:dicarboxylate symporter family KD35_RS08750 PF03553 Na+/H+ antiporter family KD35_RS08765 PF09922 Cell wall-active antibiotics response 4TMS YvqF KD35_RS08770 PF07730 Histidine kinase KD35_RS08770 PF00672 HAMP domain KD35_RS08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08775 PF00196 Bacterial regulatory proteins, luxR family KD35_RS08775 PF00072 Response regulator receiver domain KD35_RS08785 PF05525 Branched-chain amino acid transport protein KD35_RS08795 PF08241 Methyltransferase domain KD35_RS08820 PF00175 Oxidoreductase NAD-binding domain KD35_RS08820 PF00042 Globin KD35_RS08820 PF00970 Oxidoreductase FAD-binding domain KD35_RS08840 PF01925 Sulfite exporter TauE/SafE KD35_RS08845 PF01384 Phosphate transporter family KD35_RS08850 PF01865 Protein of unknown function DUF47 KD35_RS08855 PF00912 Transglycosylase KD35_RS08855 PF00905 Penicillin binding protein transpeptidase domain KD35_RS08870 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08870 PF00989 PAS fold KD35_RS08875 PF01904 Protein of unknown function DUF72 KD35_RS08885 PF00589 Phage integrase family KD35_RS08890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08890 PF16736 Single Cache-like KD35_RS08890 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08890 PF00989 PAS fold KD35_RS08895 PF01048 Phosphorylase superfamily KD35_RS08910 PF03706 Lysylphosphatidylglycerol synthase TM region KD35_RS08910 PF09924 Uncharacterised conserved protein (DUF2156) KD35_RS08925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KD35_RS08925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KD35_RS08930 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS08930 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS08935 PF07670 Nucleoside recognition KD35_RS08940 PF07670 Nucleoside recognition KD35_RS08945 PF01479 S4 domain KD35_RS08945 PF00849 RNA pseudouridylate synthase KD35_RS08950 PF00578 AhpC/TSA family KD35_RS08955 PF05140 ResB-like family KD35_RS08960 PF01578 Cytochrome C assembly protein KD35_RS08965 PF00486 Transcriptional regulatory protein, C terminal KD35_RS08965 PF00072 Response regulator receiver domain KD35_RS08970 PF18698 Histidine kinase sensor domain KD35_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS08970 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS08970 PF00672 HAMP domain KD35_RS08970 PF00989 PAS fold KD35_RS08975 PF01923 Cobalamin adenosyltransferase KD35_RS08990 PF12822 ECF transporter, substrate-specific component KD35_RS09000 PF14493 Helix-turn-helix domain KD35_RS09005 PF00271 Helicase conserved C-terminal domain KD35_RS09005 PF00270 DEAD/DEAH box helicase KD35_RS09010 PF02517 CPBP intramembrane metalloprotease KD35_RS09025 PF02607 B12 binding domain KD35_RS09025 PF02310 B12 binding domain KD35_RS09025 PF13411 MerR HTH family regulatory protein KD35_RS09030 PF05389 Negative regulator of genetic competence (MecA) KD35_RS09035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KD35_RS09035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KD35_RS09060 PF00710 Asparaginase, N-terminal KD35_RS09060 PF17763 Glutaminase/Asparaginase C-terminal domain KD35_RS09070 PF02224 Cytidylate kinase KD35_RS09075 PF00575 S1 RNA binding domain KD35_RS09080 PF01070 FMN-dependent dehydrogenase KD35_RS09085 PF14140 YpzI-like protein KD35_RS09095 PF14045 YIEGIA protein KD35_RS09105 PF01926 50S ribosome-binding GTPase KD35_RS09105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KD35_RS09110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KD35_RS09110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KD35_RS09120 PF10966 Protein of unknown function (DUF2768) KD35_RS09130 PF09547 Stage IV sporulation protein A (spore_IV_A) KD35_RS09135 PF00216 Bacterial DNA-binding protein KD35_RS09140 PF01227 GTP cyclohydrolase I KD35_RS09145 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KD35_RS09150 PF01209 ubiE/COQ5 methyltransferase family KD35_RS09155 PF00348 Polyprenyl synthetase KD35_RS09160 PF00334 Nucleoside diphosphate kinase KD35_RS09165 PF01264 Chorismate synthase KD35_RS09170 PF01761 3-dehydroquinate synthase KD35_RS09175 PF00155 Aminotransferase class I and II KD35_RS09185 PF08864 UPF0302 domain KD35_RS09185 PF08858 IDEAL domain KD35_RS09190 PF10673 Protein of unknown function (DUF2487) KD35_RS09195 PF00355 Rieske [2Fe-2S] domain KD35_RS09200 PF00033 Cytochrome b/b6/petB KD35_RS09205 PF00032 Cytochrome b(C-terminal)/b6/petD KD35_RS09205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KD35_RS09210 PF07187 Protein of unknown function (DUF1405) KD35_RS09220 PF09577 Sporulation protein YpjB (SpoYpjB) KD35_RS09225 PF04298 Putative neutral zinc metallopeptidase KD35_RS09235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS09235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS09240 PF03819 MazG nucleotide pyrophosphohydrolase domain KD35_RS09245 PF01113 Dihydrodipicolinate reductase, N-terminus KD35_RS09245 PF05173 Dihydrodipicolinate reductase, C-terminus KD35_RS09250 PF02142 MGS-like domain KD35_RS09255 PF02585 GlcNAc-PI de-N-acetylase KD35_RS09260 PF13439 Glycosyltransferase Family 4 KD35_RS09260 PF00534 Glycosyl transferases group 1 KD35_RS09265 PF13735 tRNA nucleotidyltransferase domain 2 putative KD35_RS09265 PF01743 Poly A polymerase head domain KD35_RS09265 PF12627 Probable RNA and SrmB- binding site of polymerase A KD35_RS09270 PF02237 Biotin protein ligase C terminal domain KD35_RS09270 PF03099 Biotin/lipoate A/B protein ligase family KD35_RS09270 PF08279 HTH domain KD35_RS09285 PF02548 Ketopantoate hydroxymethyltransferase KD35_RS09290 PF02569 Pantoate-beta-alanine ligase KD35_RS09295 PF02261 Aspartate decarboxylase KD35_RS09300 PF00929 Exonuclease KD35_RS09300 PF13307 Helicase C-terminal domain KD35_RS09300 PF04851 Type III restriction enzyme, res subunit KD35_RS09305 PF14084 Protein of unknown function (DUF4264) KD35_RS09315 PF00155 Aminotransferase class I and II KD35_RS09320 PF07261 Replication initiation and membrane attachment KD35_RS09325 PF10576 Iron-sulfur binding domain of endonuclease III KD35_RS09325 PF00633 Helix-hairpin-helix motif KD35_RS09325 PF00730 HhH-GPD superfamily base excision DNA repair protein KD35_RS09340 PF03838 Recombination protein U KD35_RS09345 PF10720 Protein of unknown function (DUF2515) KD35_RS09375 PF06908 YspA SLOG family KD35_RS09380 PF05103 DivIVA protein KD35_RS09385 PF01170 Putative RNA methylase family UPF0020 KD35_RS09385 PF02926 THUMP domain KD35_RS09395 PF13307 Helicase C-terminal domain KD35_RS09400 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KD35_RS09410 PF01636 Phosphotransferase enzyme family KD35_RS09415 PF00557 Metallopeptidase family M24 KD35_RS09420 PF00156 Phosphoribosyl transferase domain KD35_RS09425 PF00860 Permease family KD35_RS09430 PF04235 Protein of unknown function (DUF418) KD35_RS09435 PF00350 Dynamin family KD35_RS09445 PF00583 Acetyltransferase (GNAT) family KD35_RS09450 PF10752 Protein of unknown function (DUF2533) KD35_RS09455 PF00581 Rhodanese-like domain KD35_RS09470 PF03738 Glutathionylspermidine synthase preATP-grasp KD35_RS09480 PF00690 Cation transporter/ATPase, N-terminus KD35_RS09480 PF00689 Cation transporting ATPase, C-terminus KD35_RS09485 PF01367 5'-3' exonuclease, C-terminal SAM fold KD35_RS09485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KD35_RS09510 PF02397 Bacterial sugar transferase KD35_RS09525 PF00535 Glycosyl transferase family 2 KD35_RS09530 PF00534 Glycosyl transferases group 1 KD35_RS09530 PF13439 Glycosyltransferase Family 4 KD35_RS09545 PF18014 Acetyltransferase (GNAT) domain KD35_RS09545 PF13673 Acetyltransferase (GNAT) domain KD35_RS09565 PF13456 Reverse transcriptase-like KD35_RS09570 PF01263 Aldose 1-epimerase KD35_RS09595 PF00313 'Cold-shock' DNA-binding domain KD35_RS09605 PF01810 LysE type translocator KD35_RS09620 PF04341 Protein of unknown function, DUF485 KD35_RS09630 PF00202 Aminotransferase class-III KD35_RS09640 PF00999 Sodium/hydrogen exchanger family KD35_RS09645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KD35_RS09645 PF00753 Metallo-beta-lactamase superfamily KD35_RS09645 PF17770 Ribonuclease J C-terminal domain KD35_RS09650 PF13411 MerR HTH family regulatory protein KD35_RS09650 PF06445 GyrI-like small molecule binding domain KD35_RS09660 PF04239 Protein of unknown function (DUF421) KD35_RS09665 PF02698 DUF218 domain KD35_RS09675 PF00881 Nitroreductase family KD35_RS09720 PF17209 Hfq protein KD35_RS09730 PF01618 MotA/TolQ/ExbB proton channel family KD35_RS09735 PF00691 OmpA family KD35_RS09735 PF13677 Membrane MotB of proton-channel complex MotA/MotB KD35_RS09740 PF00072 Response regulator receiver domain KD35_RS09750 PF04509 CheC-like family KD35_RS09750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KD35_RS09765 PF03705 CheR methyltransferase, all-alpha domain KD35_RS09765 PF01739 CheR methyltransferase, SAM binding domain KD35_RS09785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KD35_RS09785 PF00460 Flagella basal body rod protein KD35_RS09790 PF00669 Bacterial flagellin N-terminal helical region KD35_RS09790 PF00700 Bacterial flagellin C-terminal helical region KD35_RS09815 PF00460 Flagella basal body rod protein KD35_RS09820 PF00460 Flagella basal body rod protein KD35_RS09820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KD35_RS09825 PF02049 Flagellar hook-basal body complex protein FliE KD35_RS09830 PF01514 Secretory protein of YscJ/FliF family KD35_RS09830 PF08345 Flagellar M-ring protein C-terminal KD35_RS09840 PF14842 FliG N-terminal domain KD35_RS09840 PF01706 FliG C-terminal domain KD35_RS09840 PF14841 FliG middle domain KD35_RS09850 PF02874 ATP synthase alpha/beta family, beta-barrel domain KD35_RS09850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KD35_RS09850 PF18269 T3SS EscN ATPase C-terminal domain KD35_RS09875 PF00460 Flagella basal body rod protein KD35_RS09875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KD35_RS09875 PF07559 Flagellar basal body protein FlaE KD35_RS09890 PF00072 Response regulator receiver domain KD35_RS09890 PF01584 CheW-like domain KD35_RS09895 PF12181 DNA binding domain of the motility gene repressor (MogR) KD35_RS09900 PF00535 Glycosyl transferase family 2 KD35_RS09930 PF13181 Tetratricopeptide repeat KD35_RS09930 PF00535 Glycosyl transferase family 2 KD35_RS09955 PF00669 Bacterial flagellin N-terminal helical region KD35_RS09955 PF00700 Bacterial flagellin C-terminal helical region KD35_RS09960 PF01464 Transglycosylase SLT domain KD35_RS09975 PF04509 CheC-like family KD35_RS09975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KD35_RS09985 PF00813 FliP family KD35_RS09990 PF01313 Bacterial export proteins, family 3 KD35_RS10000 PF01312 FlhB HrpN YscU SpaS Family KD35_RS10005 PF00771 FHIPEP family KD35_RS10010 PF00448 SRP54-type protein, GTPase domain KD35_RS10015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KD35_RS10015 PF00460 Flagella basal body rod protein KD35_RS10020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KD35_RS10020 PF01411 tRNA synthetases class II (A) KD35_RS10020 PF02272 DHHA1 domain KD35_RS10045 PF00440 Bacterial regulatory proteins, tetR family KD35_RS10045 PF17932 Tetracyclin repressor-like, C-terminal domain KD35_RS10050 PF17329 Family of unknown function (DUF5367) KD35_RS10065 PF03992 Antibiotic biosynthesis monooxygenase KD35_RS10070 PF08141 Small acid-soluble spore protein H family KD35_RS10090 PF03466 LysR substrate binding domain KD35_RS10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS10095 PF08402 TOBE domain KD35_RS10095 PF00005 ABC transporter KD35_RS10105 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS10110 PF00753 Metallo-beta-lactamase superfamily KD35_RS10110 PF12706 Beta-lactamase superfamily domain KD35_RS10120 PF10787 Uncharacterised protein from bacillus cereus group KD35_RS10135 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS10135 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS10145 PF00300 Histidine phosphatase superfamily (branch 1) KD35_RS10185 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS10190 PF04286 Protein of unknown function (DUF445) KD35_RS10215 PF00072 Response regulator receiver domain KD35_RS10215 PF00196 Bacterial regulatory proteins, luxR family KD35_RS10220 PF07730 Histidine kinase KD35_RS10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS10220 PF13492 GAF domain KD35_RS10220 PF13185 GAF domain KD35_RS10225 PF00005 ABC transporter KD35_RS10240 PF13091 PLD-like domain KD35_RS10245 PF00696 Amino acid kinase family KD35_RS10250 PF00375 Sodium:dicarboxylate symporter family KD35_RS10255 PF00206 Lyase KD35_RS10255 PF10415 Fumarase C C-terminus KD35_RS10260 PF00390 Malic enzyme, N-terminal domain KD35_RS10260 PF03949 Malic enzyme, NAD binding domain KD35_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS10270 PF08664 YcbB domain KD35_RS10270 PF00072 Response regulator receiver domain KD35_RS10275 PF04434 SWIM zinc finger KD35_RS10275 PF00176 SNF2 family N-terminal domain KD35_RS10275 PF00271 Helicase conserved C-terminal domain KD35_RS10295 PF03590 Aspartate-ammonia ligase KD35_RS10310 PF00696 Amino acid kinase family KD35_RS10310 PF13840 ACT domain KD35_RS10325 PF13761 Domain of unknown function (DUF4166) KD35_RS10330 PF14158 YndJ-like protein KD35_RS10335 PF00293 NUDIX domain KD35_RS10340 PF02368 Bacterial Ig-like domain (group 2) KD35_RS10340 PF00395 S-layer homology domain KD35_RS10340 PF13205 Bacterial Ig-like domain KD35_RS10350 PF07690 Major Facilitator Superfamily KD35_RS10365 PF02554 Carbon starvation protein CstA KD35_RS10370 PF03976 Polyphosphate kinase 2 (PPK2) KD35_RS10380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KD35_RS10380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KD35_RS10390 PF13167 GTP-binding GTPase N-terminal KD35_RS10390 PF01926 50S ribosome-binding GTPase KD35_RS10390 PF16360 GTP-binding GTPase Middle Region KD35_RS10400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS10405 PF07690 Major Facilitator Superfamily KD35_RS10410 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS10425 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS10425 PF01943 Polysaccharide biosynthesis protein KD35_RS10430 PF00209 Sodium:neurotransmitter symporter family KD35_RS10435 PF00457 Glycosyl hydrolases family 11 KD35_RS10435 PF03422 Carbohydrate binding module (family 6) KD35_RS10435 PF01522 Polysaccharide deacetylase KD35_RS10445 PF04239 Protein of unknown function (DUF421) KD35_RS10460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KD35_RS10460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KD35_RS10475 PF01625 Peptide methionine sulfoxide reductase KD35_RS10485 PF01063 Amino-transferase class IV KD35_RS10490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS10490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS10490 PF00205 Thiamine pyrophosphate enzyme, central domain KD35_RS10495 PF10369 Small subunit of acetolactate synthase KD35_RS10500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KD35_RS10500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KD35_RS10505 PF00920 Dehydratase family KD35_RS10510 PF00585 C-terminal regulatory domain of Threonine dehydratase KD35_RS10510 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS10520 PF09587 Bacterial capsule synthesis protein PGA_cap KD35_RS10535 PF07690 Major Facilitator Superfamily KD35_RS10540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KD35_RS10550 PF04397 LytTr DNA-binding domain KD35_RS10550 PF00072 Response regulator receiver domain KD35_RS10555 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KD35_RS10555 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KD35_RS10570 PF01979 Amidohydrolase family KD35_RS10575 PF12146 Serine aminopeptidase, S33 KD35_RS10575 PF13026 Protein of unknown function (DUF3887) KD35_RS10580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS10605 PF04055 Radical SAM superfamily KD35_RS10605 PF13186 Iron-sulfur cluster-binding domain KD35_RS10610 PF13302 Acetyltransferase (GNAT) domain KD35_RS10615 PF00072 Response regulator receiver domain KD35_RS10615 PF00486 Transcriptional regulatory protein, C terminal KD35_RS10630 PF01566 Natural resistance-associated macrophage protein KD35_RS10635 PF00581 Rhodanese-like domain KD35_RS10635 PF12368 Rhodanase C-terminal KD35_RS10635 PF17773 UPF0176 acylphosphatase like domain KD35_RS10645 PF02558 Ketopantoate reductase PanE/ApbA KD35_RS10645 PF08546 Ketopantoate reductase PanE/ApbA C terminal KD35_RS10665 PF05791 Bacillus haemolytic enterotoxin (HBL) KD35_RS10670 PF05791 Bacillus haemolytic enterotoxin (HBL) KD35_RS10680 PF04198 Putative sugar-binding domain KD35_RS10685 PF01791 DeoC/LacD family aldolase KD35_RS10690 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS10690 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS10695 PF00591 Glycosyl transferase family, a/b domain KD35_RS10695 PF02885 Glycosyl transferase family, helical bundle domain KD35_RS10695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KD35_RS10700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KD35_RS10710 PF05979 Bacterial protein of unknown function (DUF896) KD35_RS10730 PF00557 Metallopeptidase family M24 KD35_RS10730 PF05195 Aminopeptidase P, N-terminal domain KD35_RS10735 PF07731 Multicopper oxidase KD35_RS10735 PF07732 Multicopper oxidase KD35_RS10740 PF01551 Peptidase family M23 KD35_RS10750 PF01396 Topoisomerase DNA binding C4 zinc finger KD35_RS10750 PF13342 C-terminal repeat of topoisomerase KD35_RS10750 PF01131 DNA topoisomerase KD35_RS10750 PF01751 Toprim domain KD35_RS10765 PF02525 Flavodoxin-like fold KD35_RS10780 PF13115 YtkA-like KD35_RS10780 PF05425 Copper resistance protein D KD35_RS10780 PF04234 CopC domain KD35_RS10785 PF07987 Domain of unkown function (DUF1775) KD35_RS10795 PF00892 EamA-like transporter family KD35_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS10800 PF03466 LysR substrate binding domain KD35_RS10805 PF02082 Transcriptional regulator KD35_RS10810 PF01323 DSBA-like thioredoxin domain KD35_RS10815 PF00881 Nitroreductase family KD35_RS10825 PF01425 Amidase KD35_RS10830 PF01594 AI-2E family transporter KD35_RS10835 PF00056 lactate/malate dehydrogenase, NAD binding domain KD35_RS10835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KD35_RS10840 PF01593 Flavin containing amine oxidoreductase KD35_RS10845 PF02492 CobW/HypB/UreG, nucleotide-binding domain KD35_RS10845 PF07683 Cobalamin synthesis protein cobW C-terminal domain KD35_RS10860 PF13193 AMP-binding enzyme C-terminal domain KD35_RS10860 PF00501 AMP-binding enzyme KD35_RS10865 PF01575 MaoC like domain KD35_RS10870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KD35_RS10870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KD35_RS10880 PF00005 ABC transporter KD35_RS10880 PF12399 Branched-chain amino acid ATP-binding cassette transporter KD35_RS10885 PF00005 ABC transporter KD35_RS10890 PF02653 Branched-chain amino acid transport system / permease component KD35_RS10900 PF03466 LysR substrate binding domain KD35_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS10920 PF01047 MarR family KD35_RS10930 PF01654 Cytochrome bd terminal oxidase subunit I KD35_RS10935 PF02322 Cytochrome bd terminal oxidase subunit II KD35_RS10940 PF00005 ABC transporter KD35_RS10940 PF00664 ABC transporter transmembrane region KD35_RS10945 PF00005 ABC transporter KD35_RS10945 PF00664 ABC transporter transmembrane region KD35_RS10960 PF17676 LD-carboxypeptidase C-terminal domain KD35_RS10960 PF02016 LD-carboxypeptidase N-terminal domain KD35_RS10965 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS10965 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS10980 PF01476 LysM domain KD35_RS10980 PF00877 NlpC/P60 family KD35_RS10990 PF00664 ABC transporter transmembrane region KD35_RS10990 PF00005 ABC transporter KD35_RS10995 PF00005 ABC transporter KD35_RS10995 PF00664 ABC transporter transmembrane region KD35_RS11000 PF00072 Response regulator receiver domain KD35_RS11000 PF00486 Transcriptional regulatory protein, C terminal KD35_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS11005 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS11005 PF00989 PAS fold KD35_RS11005 PF16736 Single Cache-like KD35_RS11015 PF00106 short chain dehydrogenase KD35_RS11025 PF04439 Streptomycin adenylyltransferase KD35_RS11030 PF01522 Polysaccharide deacetylase KD35_RS11050 PF01842 ACT domain KD35_RS11050 PF03447 Homoserine dehydrogenase, NAD binding domain KD35_RS11050 PF00742 Homoserine dehydrogenase KD35_RS11055 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS11060 PF08544 GHMP kinases C terminal KD35_RS11060 PF00288 GHMP kinases N terminal domain KD35_RS11075 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS11085 PF00072 Response regulator receiver domain KD35_RS11085 PF00486 Transcriptional regulatory protein, C terminal KD35_RS11090 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS11090 PF16736 Single Cache-like KD35_RS11090 PF00989 PAS fold KD35_RS11090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS11095 PF01522 Polysaccharide deacetylase KD35_RS11105 PF02308 MgtC family KD35_RS11110 PF00583 Acetyltransferase (GNAT) family KD35_RS11115 PF06276 Ferric iron reductase FhuF-like transporter KD35_RS11115 PF04183 IucA / IucC family KD35_RS11120 PF04183 IucA / IucC family KD35_RS11120 PF06276 Ferric iron reductase FhuF-like transporter KD35_RS11125 PF13193 AMP-binding enzyme C-terminal domain KD35_RS11125 PF00501 AMP-binding enzyme KD35_RS11140 PF01261 Xylose isomerase-like TIM barrel KD35_RS11145 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS11155 PF01810 LysE type translocator KD35_RS11165 PF01734 Patatin-like phospholipase KD35_RS11190 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS11190 PF00293 NUDIX domain KD35_RS11195 PF02540 NAD synthase KD35_RS11205 PF18277 AbrB C-terminal domain KD35_RS11205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KD35_RS11210 PF00082 Subtilase family KD35_RS11215 PF01022 Bacterial regulatory protein, arsR family KD35_RS11220 PF00248 Aldo/keto reductase family KD35_RS11225 PF07690 Major Facilitator Superfamily KD35_RS11245 PF03193 RsgA GTPase KD35_RS11250 PF00672 HAMP domain KD35_RS11250 PF02743 Cache domain KD35_RS11250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS11275 PF00210 Ferritin-like domain KD35_RS11290 PF00296 Luciferase-like monooxygenase KD35_RS11300 PF01593 Flavin containing amine oxidoreductase KD35_RS11310 PF00248 Aldo/keto reductase family KD35_RS11315 PF02492 CobW/HypB/UreG, nucleotide-binding domain KD35_RS11315 PF07683 Cobalamin synthesis protein cobW C-terminal domain KD35_RS11320 PF00583 Acetyltransferase (GNAT) family KD35_RS11380 PF01297 Zinc-uptake complex component A periplasmic KD35_RS11380 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KD35_RS11390 PF13460 NAD(P)H-binding KD35_RS11395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KD35_RS11400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KD35_RS11400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KD35_RS11410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS11415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS11425 PF00300 Histidine phosphatase superfamily (branch 1) KD35_RS11435 PF08757 CotH kinase protein KD35_RS11440 PF00293 NUDIX domain KD35_RS11445 PF09335 SNARE associated Golgi protein KD35_RS11450 PF01943 Polysaccharide biosynthesis protein KD35_RS11450 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS11460 PF03773 Predicted permease KD35_RS11465 PF09323 Domain of unknown function (DUF1980) KD35_RS11470 PF03061 Thioesterase superfamily KD35_RS11475 PF13396 Phospholipase_D-nuclease N-terminal KD35_RS11475 PF13091 PLD-like domain KD35_RS11490 PF13460 NAD(P)H-binding KD35_RS11495 PF04306 Protein of unknown function (DUF456) KD35_RS11500 PF01595 Cyclin M transmembrane N-terminal domain KD35_RS11500 PF00571 CBS domain KD35_RS11500 PF03471 Transporter associated domain KD35_RS11515 PF05525 Branched-chain amino acid transport protein KD35_RS11520 PF01588 Putative tRNA binding domain KD35_RS11540 PF07454 Stage II sporulation protein P (SpoIIP) KD35_RS11550 PF02557 D-alanyl-D-alanine carboxypeptidase KD35_RS11560 PF01425 Amidase KD35_RS11565 PF07690 Major Facilitator Superfamily KD35_RS11575 PF01145 SPFH domain / Band 7 family KD35_RS11580 PF00300 Histidine phosphatase superfamily (branch 1) KD35_RS11595 PF01168 Alanine racemase, N-terminal domain KD35_RS11595 PF00842 Alanine racemase, C-terminal domain KD35_RS11600 PF13847 Methyltransferase domain KD35_RS11615 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KD35_RS11620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS11620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS11625 PF00155 Aminotransferase class I and II KD35_RS11625 PF00392 Bacterial regulatory proteins, gntR family KD35_RS11650 PF00583 Acetyltransferase (GNAT) family KD35_RS11700 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KD35_RS11725 PF01209 ubiE/COQ5 methyltransferase family KD35_RS11730 PF01268 Formate--tetrahydrofolate ligase KD35_RS11740 PF00270 DEAD/DEAH box helicase KD35_RS11740 PF00271 Helicase conserved C-terminal domain KD35_RS11745 PF01261 Xylose isomerase-like TIM barrel KD35_RS11750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS11760 PF00107 Zinc-binding dehydrogenase KD35_RS11760 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS11765 PF08281 Sigma-70, region 4 KD35_RS11765 PF04542 Sigma-70 region 2 KD35_RS11790 PF00255 Glutathione peroxidase KD35_RS11795 PF11992 Domain of unknown function (DUF3488) KD35_RS11795 PF01841 Transglutaminase-like superfamily KD35_RS11795 PF13559 Domain of unknown function (DUF4129) KD35_RS11800 PF01882 Protein of unknown function DUF58 KD35_RS11805 PF07726 ATPase family associated with various cellular activities (AAA) KD35_RS11805 PF17863 AAA lid domain KD35_RS11820 PF14710 Respiratory nitrate reductase alpha N-terminal KD35_RS11820 PF00384 Molybdopterin oxidoreductase KD35_RS11820 PF01568 Molydopterin dinucleotide binding domain KD35_RS11825 PF14711 Respiratory nitrate reductase beta C-terminal KD35_RS11825 PF13247 4Fe-4S dicluster domain KD35_RS11830 PF02613 Nitrate reductase delta subunit KD35_RS11835 PF02665 Nitrate reductase gamma subunit KD35_RS11840 PF00392 Bacterial regulatory proteins, gntR family KD35_RS11840 PF00155 Aminotransferase class I and II KD35_RS11845 PF00005 ABC transporter KD35_RS11855 PF00027 Cyclic nucleotide-binding domain KD35_RS11855 PF00325 Bacterial regulatory proteins, crp family KD35_RS11860 PF04055 Radical SAM superfamily KD35_RS11860 PF06463 Molybdenum Cofactor Synthesis C KD35_RS11865 PF00899 ThiF family KD35_RS11870 PF03453 MoeA N-terminal region (domain I and II) KD35_RS11870 PF00994 Probable molybdopterin binding domain KD35_RS11870 PF03454 MoeA C-terminal region (domain IV) KD35_RS11875 PF02391 MoaE protein KD35_RS11885 PF07690 Major Facilitator Superfamily KD35_RS11905 PF01903 CbiX KD35_RS11910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KD35_RS11915 PF00355 Rieske [2Fe-2S] domain KD35_RS11920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS11920 PF04324 BFD-like [2Fe-2S] binding domain KD35_RS11920 PF18267 Rubredoxin NAD+ reductase C-terminal domain KD35_RS11920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KD35_RS11920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KD35_RS11925 PF04405 Domain of Unknown function (DUF542) KD35_RS11925 PF01814 Hemerythrin HHE cation binding domain KD35_RS11960 PF04232 Stage V sporulation protein S (SpoVS) KD35_RS11975 PF01510 N-acetylmuramoyl-L-alanine amidase KD35_RS11990 PF01966 HD domain KD35_RS11995 PF00005 ABC transporter KD35_RS11995 PF16326 ABC transporter C-terminal domain KD35_RS11995 PF12848 ABC transporter KD35_RS12010 PF00436 Single-strand binding protein family KD35_RS12015 PF00440 Bacterial regulatory proteins, tetR family KD35_RS12020 PF01494 FAD binding domain KD35_RS12025 PF01494 FAD binding domain KD35_RS12030 PF13769 Virulence factor KD35_RS12030 PF08712 Scaffold protein Nfu/NifU N terminal KD35_RS12040 PF06491 Disulphide isomerase KD35_RS12045 PF04445 Putative SAM-dependent methyltransferase KD35_RS12050 PF05746 DALR anticodon binding domain KD35_RS12050 PF03485 Arginyl tRNA synthetase N terminal domain KD35_RS12050 PF00750 tRNA synthetases class I (R) KD35_RS12075 PF00133 tRNA synthetases class I (I, L, M and V) KD35_RS12075 PF08264 Anticodon-binding domain of tRNA KD35_RS12090 PF01225 Mur ligase family, catalytic domain KD35_RS12090 PF08245 Mur ligase middle domain KD35_RS12090 PF02875 Mur ligase family, glutamate ligase domain KD35_RS12095 PF01336 OB-fold nucleic acid binding domain KD35_RS12095 PF00152 tRNA synthetases class II (D, K and N) KD35_RS12115 PF01580 FtsK/SpoIIIE family KD35_RS12115 PF12538 DNA transporter KD35_RS12210 PF02595 Glycerate kinase family KD35_RS12215 PF00939 Sodium:sulfate symporter transmembrane region KD35_RS12220 PF00072 Response regulator receiver domain KD35_RS12220 PF00486 Transcriptional regulatory protein, C terminal KD35_RS12225 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS12225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS12225 PF00672 HAMP domain KD35_RS12240 PF00209 Sodium:neurotransmitter symporter family KD35_RS12255 PF10997 Alternate to MurJ KD35_RS12260 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS12270 PF00465 Iron-containing alcohol dehydrogenase KD35_RS12275 PF01177 Asp/Glu/Hydantoin racemase KD35_RS12280 PF01980 tRNA-methyltransferase O KD35_RS12285 PF00583 Acetyltransferase (GNAT) family KD35_RS12300 PF00005 ABC transporter KD35_RS12305 PF05975 Bacterial ABC transporter protein EcsB KD35_RS12310 PF14005 YpjP-like protein KD35_RS12315 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS12335 PF07930 D-aminopeptidase, domain B KD35_RS12335 PF00144 Beta-lactamase KD35_RS12340 PF00303 Thymidylate synthase KD35_RS12345 PF00186 Dihydrofolate reductase KD35_RS12350 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS12350 PF05223 NTF2-like N-terminal transpeptidase domain KD35_RS12350 PF00905 Penicillin binding protein transpeptidase domain KD35_RS12355 PF02525 Flavodoxin-like fold KD35_RS12360 PF01553 Acyltransferase KD35_RS12365 PF03006 Haemolysin-III related KD35_RS12370 PF02416 mttA/Hcf106 family KD35_RS12375 PF00902 Sec-independent protein translocase protein (TatC) KD35_RS12385 PF02645 Uncharacterised protein, DegV family COG1307 KD35_RS12395 PF02630 SCO1/SenC KD35_RS12400 PF00011 Hsp20/alpha crystallin family KD35_RS12405 PF13537 Glutamine amidotransferase domain KD35_RS12405 PF00733 Asparagine synthase KD35_RS12425 PF01497 Periplasmic binding protein KD35_RS12430 PF01063 Amino-transferase class IV KD35_RS12435 PF00881 Nitroreductase family KD35_RS12460 PF00011 Hsp20/alpha crystallin family KD35_RS12465 PF00924 Mechanosensitive ion channel KD35_RS12470 PF07730 Histidine kinase KD35_RS12470 PF13185 GAF domain KD35_RS12475 PF00072 Response regulator receiver domain KD35_RS12475 PF00196 Bacterial regulatory proteins, luxR family KD35_RS12485 PF01418 Helix-turn-helix domain, rpiR family KD35_RS12485 PF01380 SIS domain KD35_RS12490 PF00107 Zinc-binding dehydrogenase KD35_RS12490 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS12520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KD35_RS12520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KD35_RS12525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KD35_RS12525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KD35_RS12540 PF03358 NADPH-dependent FMN reductase KD35_RS12555 PF00571 CBS domain KD35_RS12555 PF00005 ABC transporter KD35_RS12560 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS12565 PF13520 Amino acid permease KD35_RS12595 PF00571 CBS domain KD35_RS12595 PF03471 Transporter associated domain KD35_RS12595 PF01595 Cyclin M transmembrane N-terminal domain KD35_RS12600 PF00171 Aldehyde dehydrogenase family KD35_RS12605 PF07997 Protein of unknown function (DUF1694) KD35_RS12610 PF09385 Histidine kinase N terminal KD35_RS12620 PF00202 Aminotransferase class-III KD35_RS12625 PF01144 Coenzyme A transferase KD35_RS12630 PF01144 Coenzyme A transferase KD35_RS12635 PF07687 Peptidase dimerisation domain KD35_RS12635 PF01546 Peptidase family M20/M25/M40 KD35_RS12640 PF00583 Acetyltransferase (GNAT) family KD35_RS12645 PF13426 PAS domain KD35_RS12645 PF00158 Sigma-54 interaction domain KD35_RS12645 PF02954 Bacterial regulatory protein, Fis family KD35_RS12650 PF12544 Lysine-2,3-aminomutase KD35_RS12655 PF14122 YokU-like protein, putative antitoxin KD35_RS12660 PF06855 YozE SAM-like fold KD35_RS12675 PF14162 YozD-like protein KD35_RS12690 PF07070 SpoOM protein KD35_RS12695 PF01569 PAP2 superfamily KD35_RS12700 PF01545 Cation efflux family KD35_RS12700 PF16916 Dimerisation domain of Zinc Transporter KD35_RS12705 PF00085 Thioredoxin KD35_RS12720 PF04740 LXG domain of WXG superfamily KD35_RS12720 PF14436 Bacterial EndoU nuclease KD35_RS12725 PF03424 Carbohydrate binding domain (family 17/28) KD35_RS12725 PF00150 Cellulase (glycosyl hydrolase family 5) KD35_RS12725 PF00395 S-layer homology domain KD35_RS12735 PF04471 Restriction endonuclease KD35_RS12845 PF10676 Spore germination protein gerPA/gerPF KD35_RS12865 PF00905 Penicillin binding protein transpeptidase domain KD35_RS12865 PF00912 Transglycosylase KD35_RS12870 PF07690 Major Facilitator Superfamily KD35_RS12875 PF01521 Iron-sulphur cluster biosynthesis KD35_RS12880 PF00285 Citrate synthase, C-terminal domain KD35_RS12885 PF03972 MmgE/PrpD family KD35_RS12895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS12895 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS12895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS12900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KD35_RS12900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KD35_RS12905 PF00171 Aldehyde dehydrogenase family KD35_RS12910 PF01810 LysE type translocator KD35_RS12915 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS12925 PF10763 Protein of unknown function (DUF2584) KD35_RS12930 PF12320 Type 5 capsule protein repressor C-terminal domain KD35_RS12930 PF00149 Calcineurin-like phosphoesterase KD35_RS12935 PF13476 AAA domain KD35_RS12950 PF01022 Bacterial regulatory protein, arsR family KD35_RS12965 PF07690 Major Facilitator Superfamily KD35_RS12970 PF00106 short chain dehydrogenase KD35_RS12975 PF00425 chorismate binding enzyme KD35_RS12980 PF00501 AMP-binding enzyme KD35_RS12980 PF13193 AMP-binding enzyme C-terminal domain KD35_RS12985 PF00550 Phosphopantetheine attachment site KD35_RS12985 PF00857 Isochorismatase family KD35_RS12990 PF13193 AMP-binding enzyme C-terminal domain KD35_RS12990 PF00668 Condensation domain KD35_RS12990 PF00550 Phosphopantetheine attachment site KD35_RS12990 PF00975 Thioesterase domain KD35_RS12990 PF00501 AMP-binding enzyme KD35_RS12995 PF03621 MbtH-like protein KD35_RS13000 PF07690 Major Facilitator Superfamily KD35_RS13015 PF00216 Bacterial DNA-binding protein KD35_RS13025 PF05163 DinB family KD35_RS13030 PF00082 Subtilase family KD35_RS13035 PF01235 Sodium:alanine symporter family KD35_RS13055 PF16291 Domain of unknown function (DUF4937 KD35_RS13060 PF01479 S4 domain KD35_RS13060 PF00849 RNA pseudouridylate synthase KD35_RS13065 PF02824 TGS domain KD35_RS13065 PF03129 Anticodon binding domain KD35_RS13065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS13065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KD35_RS13080 PF12146 Serine aminopeptidase, S33 KD35_RS13085 PF07690 Major Facilitator Superfamily KD35_RS13105 PF13649 Methyltransferase domain KD35_RS13150 PF00753 Metallo-beta-lactamase superfamily KD35_RS13150 PF16123 Hydroxyacylglutathione hydrolase C-terminus KD35_RS13160 PF03176 MMPL family KD35_RS13170 PF00302 Chloramphenicol acetyltransferase KD35_RS13185 PF00583 Acetyltransferase (GNAT) family KD35_RS13215 PF01593 Flavin containing amine oxidoreductase KD35_RS13225 PF13302 Acetyltransferase (GNAT) domain KD35_RS13235 PF00313 'Cold-shock' DNA-binding domain KD35_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS13300 PF03466 LysR substrate binding domain KD35_RS13305 PF02774 Semialdehyde dehydrogenase, dimerisation domain KD35_RS13305 PF01118 Semialdehyde dehydrogenase, NAD binding domain KD35_RS13320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS13320 PF03466 LysR substrate binding domain KD35_RS13325 PF03473 MOSC domain KD35_RS13325 PF03475 3-alpha domain KD35_RS13340 PF00664 ABC transporter transmembrane region KD35_RS13340 PF00005 ABC transporter KD35_RS13345 PF00664 ABC transporter transmembrane region KD35_RS13345 PF00005 ABC transporter KD35_RS13360 PF01810 LysE type translocator KD35_RS13365 PF07883 Cupin domain KD35_RS13365 PF01381 Helix-turn-helix KD35_RS13390 PF00890 FAD binding domain KD35_RS13395 PF08281 Sigma-70, region 4 KD35_RS13395 PF12680 SnoaL-like domain KD35_RS13395 PF04542 Sigma-70 region 2 KD35_RS13420 PF02638 Glycosyl hydrolase-like 10 KD35_RS13430 PF02378 Phosphotransferase system, EIIC KD35_RS13440 PF03702 Anhydro-N-acetylmuramic acid kinase KD35_RS13445 PF01869 BadF/BadG/BcrA/BcrD ATPase family KD35_RS13450 PF02660 Glycerol-3-phosphate acyltransferase KD35_RS13455 PF00266 Aminotransferase class-V KD35_RS13460 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS13475 PF16123 Hydroxyacylglutathione hydrolase C-terminus KD35_RS13475 PF00753 Metallo-beta-lactamase superfamily KD35_RS13490 PF00270 DEAD/DEAH box helicase KD35_RS13490 PF00271 Helicase conserved C-terminal domain KD35_RS13505 PF17932 Tetracyclin repressor-like, C-terminal domain KD35_RS13505 PF00440 Bacterial regulatory proteins, tetR family KD35_RS13520 PF02687 FtsX-like permease family KD35_RS13520 PF12704 MacB-like periplasmic core domain KD35_RS13520 PF00005 ABC transporter KD35_RS13525 PF03848 Tellurite resistance protein TehB KD35_RS13525 PF09313 Domain of unknown function (DUF1971) KD35_RS13535 PF08241 Methyltransferase domain KD35_RS13540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS13540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS13540 PF00205 Thiamine pyrophosphate enzyme, central domain KD35_RS13545 PF12802 MarR family KD35_RS13550 PF00300 Histidine phosphatase superfamily (branch 1) KD35_RS13555 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KD35_RS13585 PF01546 Peptidase family M20/M25/M40 KD35_RS13585 PF07687 Peptidase dimerisation domain KD35_RS13600 PF08281 Sigma-70, region 4 KD35_RS13600 PF04542 Sigma-70 region 2 KD35_RS13610 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS13610 PF00905 Penicillin binding protein transpeptidase domain KD35_RS13625 PF01569 PAP2 superfamily KD35_RS13630 PF00356 Bacterial regulatory proteins, lacI family KD35_RS13635 PF07690 Major Facilitator Superfamily KD35_RS13640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KD35_RS13640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KD35_RS13645 PF00294 pfkB family carbohydrate kinase KD35_RS13650 PF00171 Aldehyde dehydrogenase family KD35_RS13655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS13655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS13655 PF00205 Thiamine pyrophosphate enzyme, central domain KD35_RS13660 PF01261 Xylose isomerase-like TIM barrel KD35_RS13665 PF01116 Fructose-bisphosphate aldolase class-II KD35_RS13670 PF04962 KduI/IolB family KD35_RS13700 PF18801 response regulator aspartate phosphatase H, N terminal KD35_RS13705 PF01381 Helix-turn-helix KD35_RS13720 PF02557 D-alanyl-D-alanine carboxypeptidase KD35_RS13730 PF01520 N-acetylmuramoyl-L-alanine amidase KD35_RS13730 PF00395 S-layer homology domain KD35_RS13740 PF00440 Bacterial regulatory proteins, tetR family KD35_RS13745 PF16326 ABC transporter C-terminal domain KD35_RS13745 PF00005 ABC transporter KD35_RS13755 PF00563 EAL domain KD35_RS13755 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS13755 PF03707 Bacterial signalling protein N terminal repeat KD35_RS13760 PF13302 Acetyltransferase (GNAT) domain KD35_RS13770 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS13775 PF00581 Rhodanese-like domain KD35_RS13790 PF00005 ABC transporter KD35_RS13800 PF00440 Bacterial regulatory proteins, tetR family KD35_RS13800 PF08359 YsiA-like protein, C-terminal region KD35_RS13815 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS13815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS13815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS13820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KD35_RS13820 PF00289 Biotin carboxylase, N-terminal domain KD35_RS13820 PF02785 Biotin carboxylase C-terminal domain KD35_RS13825 PF00364 Biotin-requiring enzyme KD35_RS13830 PF00682 HMGL-like KD35_RS13835 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS13840 PF01039 Carboxyl transferase domain KD35_RS13845 PF00501 AMP-binding enzyme KD35_RS13845 PF16177 Acetyl-coenzyme A synthetase N-terminus KD35_RS13845 PF13193 AMP-binding enzyme C-terminal domain KD35_RS13855 PF00583 Acetyltransferase (GNAT) family KD35_RS13860 PF00485 Phosphoribulokinase / Uridine kinase family KD35_RS13870 PF05163 DinB family KD35_RS13875 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS13875 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS13880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS13880 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS13885 PF00072 Response regulator receiver domain KD35_RS13885 PF00486 Transcriptional regulatory protein, C terminal KD35_RS13890 PF01966 HD domain KD35_RS13895 PF13021 Domain of unknown function (DUF3885) KD35_RS13900 PF01048 Phosphorylase superfamily KD35_RS13940 PF17755 UvrA DNA-binding domain KD35_RS13940 PF17760 UvrA interaction domain KD35_RS13940 PF17755 UvrA DNA-binding domain KD35_RS13940 PF17760 UvrA interaction domain KD35_RS13955 PF00144 Beta-lactamase KD35_RS13960 PF00376 MerR family regulatory protein KD35_RS13960 PF09278 MerR, DNA binding KD35_RS13965 PF07690 Major Facilitator Superfamily KD35_RS13985 PF01636 Phosphotransferase enzyme family KD35_RS13990 PF12833 Helix-turn-helix domain KD35_RS14005 PF00155 Aminotransferase class I and II KD35_RS14005 PF00392 Bacterial regulatory proteins, gntR family KD35_RS14020 PF00107 Zinc-binding dehydrogenase KD35_RS14020 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS14035 PF08245 Mur ligase middle domain KD35_RS14035 PF02875 Mur ligase family, glutamate ligase domain KD35_RS14035 PF01225 Mur ligase family, catalytic domain KD35_RS14040 PF08245 Mur ligase middle domain KD35_RS14040 PF02875 Mur ligase family, glutamate ligase domain KD35_RS14040 PF01225 Mur ligase family, catalytic domain KD35_RS14055 PF07486 Cell Wall Hydrolase KD35_RS14065 PF00072 Response regulator receiver domain KD35_RS14065 PF00486 Transcriptional regulatory protein, C terminal KD35_RS14080 PF12848 ABC transporter KD35_RS14080 PF00005 ABC transporter KD35_RS14095 PF00005 ABC transporter KD35_RS14120 PF03447 Homoserine dehydrogenase, NAD binding domain KD35_RS14120 PF01842 ACT domain KD35_RS14120 PF00742 Homoserine dehydrogenase KD35_RS14125 PF00392 Bacterial regulatory proteins, gntR family KD35_RS14125 PF00155 Aminotransferase class I and II KD35_RS14130 PF01820 D-ala D-ala ligase N-terminus KD35_RS14130 PF07478 D-ala D-ala ligase C-terminus KD35_RS14135 PF03070 TENA/THI-4/PQQC family KD35_RS14210 PF00067 Cytochrome P450 KD35_RS14220 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS14225 PF07561 Domain of Unknown Function (DUF1540) KD35_RS14235 PF00067 Cytochrome P450 KD35_RS14255 PF13426 PAS domain KD35_RS14255 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS14255 PF13188 PAS domain KD35_RS14255 PF00989 PAS fold KD35_RS14260 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS14260 PF00905 Penicillin binding protein transpeptidase domain KD35_RS14265 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KD35_RS14270 PF01177 Asp/Glu/Hydantoin racemase KD35_RS14275 PF07155 ECF-type riboflavin transporter, S component KD35_RS14280 PF12558 ATP-binding cassette cobalt transporter KD35_RS14280 PF00005 ABC transporter KD35_RS14290 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS14300 PF04229 GrpB protein KD35_RS14305 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS14305 PF00107 Zinc-binding dehydrogenase KD35_RS14310 PF00905 Penicillin binding protein transpeptidase domain KD35_RS14310 PF03793 PASTA domain KD35_RS14310 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS14320 PF00144 Beta-lactamase KD35_RS14320 PF11954 Domain of unknown function (DUF3471) KD35_RS14355 PF01965 DJ-1/PfpI family KD35_RS14370 PF00144 Beta-lactamase KD35_RS14375 PF01609 Transposase DDE domain KD35_RS14385 PF07690 Major Facilitator Superfamily KD35_RS14400 PF03009 Glycerophosphoryl diester phosphodiesterase family KD35_RS14420 PF00892 EamA-like transporter family KD35_RS14425 PF01270 Glycosyl hydrolases family 8 KD35_RS14435 PF00293 NUDIX domain KD35_RS14445 PF00144 Beta-lactamase KD35_RS14455 PF07690 Major Facilitator Superfamily KD35_RS14470 PF00293 NUDIX domain KD35_RS14470 PF09297 NADH pyrophosphatase zinc ribbon domain KD35_RS14475 PF02767 DNA polymerase III beta subunit, central domain KD35_RS14475 PF02768 DNA polymerase III beta subunit, C-terminal domain KD35_RS14475 PF00712 DNA polymerase III beta subunit, N-terminal domain KD35_RS14480 PF00293 NUDIX domain KD35_RS14495 PF12706 Beta-lactamase superfamily domain KD35_RS14515 PF09234 Domain of unknown function (DUF1963) KD35_RS14545 PF01734 Patatin-like phospholipase KD35_RS14550 PF08000 Bacterial PH domain KD35_RS14560 PF12867 DinB superfamily KD35_RS14575 PF02673 Bacitracin resistance protein BacA KD35_RS14585 PF01541 GIY-YIG catalytic domain KD35_RS14625 PF01266 FAD dependent oxidoreductase KD35_RS14650 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS14670 PF00282 Pyridoxal-dependent decarboxylase conserved domain KD35_RS14675 PF00501 AMP-binding enzyme KD35_RS14675 PF00668 Condensation domain KD35_RS14675 PF13193 AMP-binding enzyme C-terminal domain KD35_RS14675 PF00550 Phosphopantetheine attachment site KD35_RS14685 PF00128 Alpha amylase, catalytic domain KD35_RS14685 PF03714 Bacterial pullanase-associated domain KD35_RS14685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KD35_RS14690 PF02868 Thermolysin metallopeptidase, alpha-helical domain KD35_RS14690 PF01447 Thermolysin metallopeptidase, catalytic domain KD35_RS14690 PF03413 Peptidase propeptide and YPEB domain KD35_RS14690 PF07504 Fungalysin/Thermolysin Propeptide Motif KD35_RS14710 PF00344 SecY translocase KD35_RS14715 PF08299 Bacterial dnaA protein helix-turn-helix KD35_RS14715 PF00308 Bacterial dnaA protein KD35_RS14715 PF11638 DnaA N-terminal domain KD35_RS14720 PF00892 EamA-like transporter family KD35_RS14725 PF00392 Bacterial regulatory proteins, gntR family KD35_RS14725 PF00155 Aminotransferase class I and II KD35_RS14730 PF00561 alpha/beta hydrolase fold KD35_RS14755 PF06081 Aromatic acid exporter family member 1 KD35_RS14770 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KD35_RS14775 PF03413 Peptidase propeptide and YPEB domain KD35_RS14775 PF14620 YpeB sporulation KD35_RS14780 PF01471 Putative peptidoglycan binding domain KD35_RS14780 PF07486 Cell Wall Hydrolase KD35_RS14795 PF03301 Tryptophan 2,3-dioxygenase KD35_RS14800 PF04199 Putative cyclase KD35_RS14805 PF00266 Aminotransferase class-V KD35_RS14810 PF08359 YsiA-like protein, C-terminal region KD35_RS14810 PF00440 Bacterial regulatory proteins, tetR family KD35_RS14815 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS14815 PF00293 NUDIX domain KD35_RS14840 PF02954 Bacterial regulatory protein, Fis family KD35_RS14840 PF01590 GAF domain KD35_RS14840 PF00158 Sigma-54 interaction domain KD35_RS14860 PF00455 DeoR C terminal sensor domain KD35_RS14860 PF08220 DeoR-like helix-turn-helix domain KD35_RS14875 PF00403 Heavy-metal-associated domain KD35_RS14875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS14875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS14880 PF02082 Transcriptional regulator KD35_RS14895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS14895 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS14900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KD35_RS14900 PF00364 Biotin-requiring enzyme KD35_RS14900 PF02817 e3 binding domain KD35_RS14905 PF02779 Transketolase, pyrimidine binding domain KD35_RS14905 PF02780 Transketolase, C-terminal domain KD35_RS14910 PF00676 Dehydrogenase E1 component KD35_RS14920 PF00106 short chain dehydrogenase KD35_RS14925 PF13673 Acetyltransferase (GNAT) domain KD35_RS14925 PF04229 GrpB protein KD35_RS14960 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS14965 PF00571 CBS domain KD35_RS14965 PF00005 ABC transporter KD35_RS14970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KD35_RS14975 PF00574 Clp protease KD35_RS14990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KD35_RS14995 PF13673 Acetyltransferase (GNAT) domain KD35_RS15000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KD35_RS15000 PF18416 N-acetylglucosamine binding protein domain 2 KD35_RS15015 PF10990 Protein of unknown function (DUF2809) KD35_RS15045 PF13567 Domain of unknown function (DUF4131) KD35_RS15045 PF00753 Metallo-beta-lactamase superfamily KD35_RS15045 PF03772 Competence protein KD35_RS15095 PF13538 UvrD-like helicase C-terminal domain KD35_RS15110 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KD35_RS15115 PF16124 RecQ zinc-binding KD35_RS15115 PF00270 DEAD/DEAH box helicase KD35_RS15115 PF00271 Helicase conserved C-terminal domain KD35_RS15115 PF00570 HRDC domain KD35_RS15115 PF09382 RQC domain KD35_RS15165 PF02833 DHHA2 domain KD35_RS15165 PF01368 DHH family KD35_RS15170 PF18416 N-acetylglucosamine binding protein domain 2 KD35_RS15170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KD35_RS15180 PF02627 Carboxymuconolactone decarboxylase family KD35_RS15185 PF01235 Sodium:alanine symporter family KD35_RS15190 PF00171 Aldehyde dehydrogenase family KD35_RS15195 PF00701 Dihydrodipicolinate synthetase family KD35_RS15200 PF05544 Proline racemase KD35_RS15205 PF05544 Proline racemase KD35_RS15210 PF01266 FAD dependent oxidoreductase KD35_RS15215 PF13188 PAS domain KD35_RS15215 PF02954 Bacterial regulatory protein, Fis family KD35_RS15215 PF00158 Sigma-54 interaction domain KD35_RS15230 PF04324 BFD-like [2Fe-2S] binding domain KD35_RS15230 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS15245 PF08876 Domain of unknown function (DUF1836) KD35_RS15250 PF09335 SNARE associated Golgi protein KD35_RS15265 PF04914 DltD protein KD35_RS15270 PF13673 Acetyltransferase (GNAT) domain KD35_RS15270 PF00117 Glutamine amidotransferase class-I KD35_RS15270 PF03352 Methyladenine glycosylase KD35_RS15270 PF00958 GMP synthase C terminal domain KD35_RS15270 PF13302 Acetyltransferase (GNAT) domain KD35_RS15275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS15280 PF00877 NlpC/P60 family KD35_RS15280 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KD35_RS15285 PF13378 Enolase C-terminal domain-like KD35_RS15285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KD35_RS15300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KD35_RS15325 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KD35_RS15325 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KD35_RS15330 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS15330 PF00989 PAS fold KD35_RS15330 PF16736 Single Cache-like KD35_RS15335 PF00486 Transcriptional regulatory protein, C terminal KD35_RS15335 PF00072 Response regulator receiver domain KD35_RS15355 PF01048 Phosphorylase superfamily KD35_RS15365 PF03808 Glycosyl transferase WecB/TagA/CpsF family KD35_RS15375 PF02645 Uncharacterised protein, DegV family COG1307 KD35_RS15395 PF07690 Major Facilitator Superfamily KD35_RS15405 PF04519 Polymer-forming cytoskeletal KD35_RS15410 PF13171 Protein of unknown function (DUF4004) KD35_RS15415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS15415 PF12793 Sugar transport-related sRNA regulator N-term KD35_RS15420 PF07690 Major Facilitator Superfamily KD35_RS15440 PF04226 Transglycosylase associated protein KD35_RS15445 PF01156 Inosine-uridine preferring nucleoside hydrolase KD35_RS15455 PF08241 Methyltransferase domain KD35_RS15490 PF00155 Aminotransferase class I and II KD35_RS15495 PF07977 FabA-like domain KD35_RS15500 PF03630 Fumble KD35_RS15520 PF00005 ABC transporter KD35_RS15570 PF01594 AI-2E family transporter KD35_RS15585 PF00296 Luciferase-like monooxygenase KD35_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS15595 PF09084 NMT1/THI5 like KD35_RS15600 PF00005 ABC transporter KD35_RS15620 PF00293 NUDIX domain KD35_RS15620 PF09297 NADH pyrophosphatase zinc ribbon domain KD35_RS15640 PF02522 Aminoglycoside 3-N-acetyltransferase KD35_RS15665 PF13536 Putative multidrug resistance efflux transporter KD35_RS15670 PF12867 DinB superfamily KD35_RS15690 PF08713 DNA alkylation repair enzyme KD35_RS15700 PF01522 Polysaccharide deacetylase KD35_RS15710 PF03741 Integral membrane protein TerC family KD35_RS15715 PF00884 Sulfatase KD35_RS15720 PF00005 ABC transporter KD35_RS15720 PF12848 ABC transporter KD35_RS15730 PF03176 MMPL family KD35_RS15735 PF03176 MMPL family KD35_RS15740 PF03176 MMPL family KD35_RS15745 PF16295 Tetracyclin repressor-like, C-terminal domain KD35_RS15745 PF00440 Bacterial regulatory proteins, tetR family KD35_RS15755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KD35_RS15760 PF01842 ACT domain KD35_RS15760 PF02153 Prephenate dehydrogenase KD35_RS15765 PF00155 Aminotransferase class I and II KD35_RS15770 PF01264 Chorismate synthase KD35_RS15775 PF01817 Chorismate mutase type II KD35_RS15775 PF00793 DAHP synthetase I family KD35_RS15795 PF01636 Phosphotransferase enzyme family KD35_RS15810 PF01476 LysM domain KD35_RS15810 PF06725 3D domain KD35_RS15820 PF08281 Sigma-70, region 4 KD35_RS15820 PF04542 Sigma-70 region 2 KD35_RS15840 PF06039 Malate:quinone oxidoreductase (Mqo) KD35_RS15845 PF13407 Periplasmic binding protein domain KD35_RS15850 PF02653 Branched-chain amino acid transport system / permease component KD35_RS15855 PF02653 Branched-chain amino acid transport system / permease component KD35_RS15860 PF00005 ABC transporter KD35_RS15865 PF00325 Bacterial regulatory proteins, crp family KD35_RS15865 PF04198 Putative sugar-binding domain KD35_RS15880 PF01791 DeoC/LacD family aldolase KD35_RS15900 PF03992 Antibiotic biosynthesis monooxygenase KD35_RS15920 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS15920 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS15925 PF00171 Aldehyde dehydrogenase family KD35_RS15930 PF00696 Amino acid kinase family KD35_RS15930 PF01472 PUA domain KD35_RS15935 PF14748 Pyrroline-5-carboxylate reductase dimerisation KD35_RS15935 PF03807 NADP oxidoreductase coenzyme F420-dependent KD35_RS15940 PF01546 Peptidase family M20/M25/M40 KD35_RS15945 PF01614 Bacterial transcriptional regulator KD35_RS15945 PF09339 IclR helix-turn-helix domain KD35_RS15950 PF00324 Amino acid permease KD35_RS15955 PF01139 tRNA-splicing ligase RtcB KD35_RS15960 PF00487 Fatty acid desaturase KD35_RS15965 PF00245 Alkaline phosphatase KD35_RS15970 PF11188 Protein of unknown function (DUF2975) KD35_RS15975 PF13443 Cro/C1-type HTH DNA-binding domain KD35_RS15990 PF10086 YhfC intramembrane metalloprotease KD35_RS16000 PF00072 Response regulator receiver domain KD35_RS16000 PF04397 LytTr DNA-binding domain KD35_RS16010 PF13302 Acetyltransferase (GNAT) domain KD35_RS16015 PF12681 Glyoxalase-like domain KD35_RS16035 PF07726 ATPase family associated with various cellular activities (AAA) KD35_RS16035 PF17863 AAA lid domain KD35_RS16050 PF07690 Major Facilitator Superfamily KD35_RS16075 PF00535 Glycosyl transferase family 2 KD35_RS16085 PF00535 Glycosyl transferase family 2 KD35_RS16095 PF00202 Aminotransferase class-III KD35_RS16100 PF06628 Catalase-related immune-responsive KD35_RS16100 PF00199 Catalase KD35_RS16110 PF13382 Adenine deaminase C-terminal domain KD35_RS16110 PF01979 Amidohydrolase family KD35_RS16115 PF00144 Beta-lactamase KD35_RS16135 PF17863 AAA lid domain KD35_RS16135 PF07726 ATPase family associated with various cellular activities (AAA) KD35_RS16145 PF00881 Nitroreductase family KD35_RS16150 PF01047 MarR family KD35_RS16155 PF00679 Elongation factor G C-terminus KD35_RS16155 PF03764 Elongation factor G, domain IV KD35_RS16155 PF14492 Elongation Factor G, domain II KD35_RS16155 PF00009 Elongation factor Tu GTP binding domain KD35_RS16165 PF00293 NUDIX domain KD35_RS16180 PF00005 ABC transporter KD35_RS16185 PF00392 Bacterial regulatory proteins, gntR family KD35_RS16195 PF12704 MacB-like periplasmic core domain KD35_RS16195 PF00005 ABC transporter KD35_RS16195 PF02687 FtsX-like permease family KD35_RS16220 PF12833 Helix-turn-helix domain KD35_RS16225 PF00583 Acetyltransferase (GNAT) family KD35_RS16240 PF00892 EamA-like transporter family KD35_RS16245 PF00155 Aminotransferase class I and II KD35_RS16245 PF00392 Bacterial regulatory proteins, gntR family KD35_RS16250 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KD35_RS16255 PF13031 Protein of unknown function (DUF3892) KD35_RS16265 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS16265 PF00672 HAMP domain KD35_RS16270 PF00486 Transcriptional regulatory protein, C terminal KD35_RS16270 PF00072 Response regulator receiver domain KD35_RS16275 PF00561 alpha/beta hydrolase fold KD35_RS16305 PF01925 Sulfite exporter TauE/SafE KD35_RS16310 PF13302 Acetyltransferase (GNAT) domain KD35_RS16315 PF00324 Amino acid permease KD35_RS16325 PF08713 DNA alkylation repair enzyme KD35_RS16330 PF10898 Protein of unknown function (DUF2716) KD35_RS16350 PF00293 NUDIX domain KD35_RS16360 PF10502 Signal peptidase, peptidase S26 KD35_RS16365 PF00905 Penicillin binding protein transpeptidase domain KD35_RS16365 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS16375 PF02146 Sir2 family KD35_RS16380 PF01470 Pyroglutamyl peptidase KD35_RS16400 PF03746 LamB/YcsF family KD35_RS16410 PF02682 Carboxyltransferase domain, subdomain C and D KD35_RS16415 PF09339 IclR helix-turn-helix domain KD35_RS16415 PF01614 Bacterial transcriptional regulator KD35_RS16420 PF10502 Signal peptidase, peptidase S26 KD35_RS16425 PF03932 CutC family KD35_RS16430 PF07454 Stage II sporulation protein P (SpoIIP) KD35_RS16445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS16445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS16445 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS16465 PF07670 Nucleoside recognition KD35_RS16480 PF02915 Rubrerythrin KD35_RS16490 PF00440 Bacterial regulatory proteins, tetR family KD35_RS16495 PF00391 PEP-utilising enzyme, mobile domain KD35_RS16495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KD35_RS16500 PF00753 Metallo-beta-lactamase superfamily KD35_RS16515 PF07875 Coat F domain KD35_RS16520 PF08892 YqcI/YcgG family KD35_RS16525 PF01810 LysE type translocator KD35_RS16540 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS16545 PF10710 Protein of unknown function (DUF2512) KD35_RS16550 PF11553 Protein of unknown function (DUF3231) KD35_RS16555 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS16560 PF13823 Alcohol dehydrogenase GroES-associated KD35_RS16560 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS16560 PF00107 Zinc-binding dehydrogenase KD35_RS16575 PF10415 Fumarase C C-terminus KD35_RS16575 PF00206 Lyase KD35_RS16580 PF17763 Glutaminase/Asparaginase C-terminal domain KD35_RS16580 PF00710 Asparaginase, N-terminal KD35_RS16585 PF01381 Helix-turn-helix KD35_RS16595 PF01541 GIY-YIG catalytic domain KD35_RS16595 PF08459 UvrC Helix-hairpin-helix N-terminal KD35_RS16595 PF02151 UvrB/uvrC motif KD35_RS16595 PF12826 Helix-hairpin-helix motif KD35_RS16600 PF13520 Amino acid permease KD35_RS16605 PF05525 Branched-chain amino acid transport protein KD35_RS16610 PF14748 Pyrroline-5-carboxylate reductase dimerisation KD35_RS16610 PF03807 NADP oxidoreductase coenzyme F420-dependent KD35_RS16615 PF13564 DoxX-like family KD35_RS16620 PF00390 Malic enzyme, N-terminal domain KD35_RS16620 PF03949 Malic enzyme, NAD binding domain KD35_RS16630 PF05504 Spore germination B3/ GerAC like, C-terminal KD35_RS16635 PF05504 Spore germination B3/ GerAC like, C-terminal KD35_RS16640 PF03845 Spore germination protein KD35_RS16645 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS16650 PF08664 YcbB domain KD35_RS16650 PF00072 Response regulator receiver domain KD35_RS16660 PF04960 Glutaminase KD35_RS16665 PF01235 Sodium:alanine symporter family KD35_RS16690 PF00149 Calcineurin-like phosphoesterase KD35_RS16690 PF17936 Bacterial Ig domain KD35_RS16690 PF02872 5'-nucleotidase, C-terminal domain KD35_RS16695 PF06628 Catalase-related immune-responsive KD35_RS16695 PF00199 Catalase KD35_RS16700 PF00561 alpha/beta hydrolase fold KD35_RS16705 PF00857 Isochorismatase family KD35_RS16720 PF01979 Amidohydrolase family KD35_RS16730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS16730 PF03466 LysR substrate binding domain KD35_RS16755 PF11181 Heat induced stress protein YflT KD35_RS16770 PF03073 TspO/MBR family KD35_RS16775 PF00875 DNA photolyase KD35_RS16775 PF03441 FAD binding domain of DNA photolyase KD35_RS16785 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KD35_RS16790 PF00361 Proton-conducting membrane transporter KD35_RS16790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KD35_RS16795 PF10057 Uncharacterized conserved protein (DUF2294) KD35_RS16805 PF01040 UbiA prenyltransferase family KD35_RS16810 PF00561 alpha/beta hydrolase fold KD35_RS16815 PF01297 Zinc-uptake complex component A periplasmic KD35_RS16820 PF00950 ABC 3 transport family KD35_RS16825 PF00005 ABC transporter KD35_RS16850 PF01451 Low molecular weight phosphotyrosine protein phosphatase KD35_RS16855 PF01758 Sodium Bile acid symporter family KD35_RS16860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS16865 PF01022 Bacterial regulatory protein, arsR family KD35_RS16880 PF00012 Hsp70 protein KD35_RS16895 PF01037 Lrp/AsnC ligand binding domain KD35_RS16910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS16920 PF01609 Transposase DDE domain KD35_RS16935 PF02805 Metal binding domain of Ada KD35_RS16935 PF12833 Helix-turn-helix domain KD35_RS16945 PF00144 Beta-lactamase KD35_RS16950 PF01609 Transposase DDE domain KD35_RS16965 PF12802 MarR family KD35_RS16970 PF00175 Oxidoreductase NAD-binding domain KD35_RS16970 PF00258 Flavodoxin KD35_RS16970 PF00667 FAD binding domain KD35_RS16970 PF00067 Cytochrome P450 KD35_RS16980 PF07690 Major Facilitator Superfamily KD35_RS17005 PF00486 Transcriptional regulatory protein, C terminal KD35_RS17005 PF00072 Response regulator receiver domain KD35_RS17010 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS17010 PF00672 HAMP domain KD35_RS17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS17040 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS17065 PF01381 Helix-turn-helix KD35_RS17080 PF00753 Metallo-beta-lactamase superfamily KD35_RS17085 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KD35_RS17095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KD35_RS17095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KD35_RS17100 PF04072 Leucine carboxyl methyltransferase KD35_RS17115 PF00005 ABC transporter KD35_RS17120 PF02687 FtsX-like permease family KD35_RS17140 PF00672 HAMP domain KD35_RS17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS17140 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS17145 PF00072 Response regulator receiver domain KD35_RS17145 PF00486 Transcriptional regulatory protein, C terminal KD35_RS17155 PF01047 MarR family KD35_RS17165 PF04299 Putative FMN-binding domain KD35_RS17170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS17170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS17175 PF07690 Major Facilitator Superfamily KD35_RS17180 PF02589 LUD domain KD35_RS17185 PF11870 Domain of unknown function (DUF3390) KD35_RS17185 PF13183 4Fe-4S dicluster domain KD35_RS17185 PF02589 LUD domain KD35_RS17190 PF02754 Cysteine-rich domain KD35_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS17195 PF03466 LysR substrate binding domain KD35_RS17205 PF17676 LD-carboxypeptidase C-terminal domain KD35_RS17205 PF02016 LD-carboxypeptidase N-terminal domain KD35_RS17230 PF07690 Major Facilitator Superfamily KD35_RS17235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KD35_RS17235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KD35_RS17240 PF05116 Sucrose-6F-phosphate phosphohydrolase KD35_RS17250 PF00356 Bacterial regulatory proteins, lacI family KD35_RS17255 PF18801 response regulator aspartate phosphatase H, N terminal KD35_RS17275 PF00817 impB/mucB/samB family KD35_RS17275 PF11798 IMS family HHH motif KD35_RS17275 PF11799 impB/mucB/samB family C-terminal domain KD35_RS17290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS17290 PF00672 HAMP domain KD35_RS17290 PF02743 Cache domain KD35_RS17305 PF01554 MatE KD35_RS17310 PF01752 Collagenase KD35_RS17310 PF18496 Collagenase G catalytic helper subdomain KD35_RS17310 PF08453 Peptidase family M9 N-terminal KD35_RS17320 PF07690 Major Facilitator Superfamily KD35_RS17325 PF00440 Bacterial regulatory proteins, tetR family KD35_RS17325 PF16859 Tetracyclin repressor-like, C-terminal domain KD35_RS17335 PF01022 Bacterial regulatory protein, arsR family KD35_RS17345 PF03313 Serine dehydratase alpha chain KD35_RS17350 PF03315 Serine dehydratase beta chain KD35_RS17350 PF01842 ACT domain KD35_RS17360 PF00202 Aminotransferase class-III KD35_RS17365 PF07503 HypF finger KD35_RS17365 PF01300 Telomere recombination KD35_RS17365 PF17788 HypF Kae1-like domain KD35_RS17365 PF00708 Acylphosphatase KD35_RS17370 PF00586 AIR synthase related protein, N-terminal domain KD35_RS17370 PF02769 AIR synthase related protein, C-terminal domain KD35_RS17375 PF00857 Isochorismatase family KD35_RS17380 PF01037 Lrp/AsnC ligand binding domain KD35_RS17385 PF13520 Amino acid permease KD35_RS17400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KD35_RS17400 PF01842 ACT domain KD35_RS17400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KD35_RS17405 PF00266 Aminotransferase class-V KD35_RS17420 PF04542 Sigma-70 region 2 KD35_RS17420 PF08281 Sigma-70, region 4 KD35_RS17435 PF07883 Cupin domain KD35_RS17445 PF12833 Helix-turn-helix domain KD35_RS17445 PF01497 Periplasmic binding protein KD35_RS17450 PF01804 Penicillin amidase KD35_RS17460 PF00395 S-layer homology domain KD35_RS17495 PF14044 NETI protein KD35_RS17500 PF07690 Major Facilitator Superfamily KD35_RS17505 PF12697 Alpha/beta hydrolase family KD35_RS17510 PF01047 MarR family KD35_RS17515 PF07690 Major Facilitator Superfamily KD35_RS17530 PF12679 ABC-2 family transporter protein KD35_RS17535 PF00005 ABC transporter KD35_RS17535 PF13732 Domain of unknown function (DUF4162) KD35_RS17540 PF13396 Phospholipase_D-nuclease N-terminal KD35_RS17550 PF17314 Family of unknown function (DUF5360) KD35_RS17555 PF00893 Small Multidrug Resistance protein KD35_RS17560 PF00440 Bacterial regulatory proteins, tetR family KD35_RS17565 PF17440 Thiol-activated cytolysin beta sandwich domain KD35_RS17565 PF01289 Thiol-activated cytolysin KD35_RS17575 PF02667 Short chain fatty acid transporter KD35_RS17585 PF02525 Flavodoxin-like fold KD35_RS17605 PF14256 YwiC-like protein KD35_RS17615 PF00005 ABC transporter KD35_RS17620 PF02361 Cobalt transport protein KD35_RS17635 PF03737 Aldolase/RraA KD35_RS17640 PF03606 C4-dicarboxylate anaerobic carrier KD35_RS17645 PF04231 Endonuclease I KD35_RS17660 PF01381 Helix-turn-helix KD35_RS17665 PF02660 Glycerol-3-phosphate acyltransferase KD35_RS17670 PF04073 Aminoacyl-tRNA editing domain KD35_RS17675 PF13393 Histidyl-tRNA synthetase KD35_RS17675 PF03129 Anticodon binding domain KD35_RS17690 PF01638 HxlR-like helix-turn-helix KD35_RS17695 PF00881 Nitroreductase family KD35_RS17705 PF00391 PEP-utilising enzyme, mobile domain KD35_RS17705 PF02887 Pyruvate kinase, alpha/beta domain KD35_RS17705 PF00224 Pyruvate kinase, barrel domain KD35_RS17725 PF00005 ABC transporter KD35_RS17750 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS17760 PF13350 Tyrosine phosphatase family KD35_RS17775 PF00293 NUDIX domain KD35_RS17775 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS17785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS17790 PF00480 ROK family KD35_RS17795 PF07690 Major Facilitator Superfamily KD35_RS17800 PF12464 Maltose acetyltransferase KD35_RS17800 PF14602 Hexapeptide repeat of succinyl-transferase KD35_RS17810 PF12704 MacB-like periplasmic core domain KD35_RS17810 PF00005 ABC transporter KD35_RS17810 PF02687 FtsX-like permease family KD35_RS17815 PF00579 tRNA synthetases class I (W and Y) KD35_RS17820 PF13288 DXP reductoisomerase C-terminal domain KD35_RS17820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KD35_RS17820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KD35_RS17825 PF01594 AI-2E family transporter KD35_RS17845 PF08241 Methyltransferase domain KD35_RS17855 PF07690 Major Facilitator Superfamily KD35_RS17875 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS17885 PF01595 Cyclin M transmembrane N-terminal domain KD35_RS17885 PF03471 Transporter associated domain KD35_RS17885 PF00571 CBS domain KD35_RS17890 PF13411 MerR HTH family regulatory protein KD35_RS17895 PF00892 EamA-like transporter family KD35_RS17900 PF00805 Pentapeptide repeats (8 copies) KD35_RS17905 PF06906 Protein of unknown function (DUF1272) KD35_RS17910 PF10282 Lactonase, 7-bladed beta-propeller KD35_RS17915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KD35_RS17915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KD35_RS17920 PF02447 GntP family permease KD35_RS17925 PF00923 Transaldolase/Fructose-6-phosphate aldolase KD35_RS17930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KD35_RS17930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KD35_RS17935 PF00456 Transketolase, thiamine diphosphate binding domain KD35_RS17935 PF02780 Transketolase, C-terminal domain KD35_RS17935 PF02779 Transketolase, pyrimidine binding domain KD35_RS17940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KD35_RS17940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KD35_RS17945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KD35_RS17945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KD35_RS17950 PF00107 Zinc-binding dehydrogenase KD35_RS17950 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS17955 PF00296 Luciferase-like monooxygenase KD35_RS17965 PF00109 Beta-ketoacyl synthase, N-terminal domain KD35_RS17965 PF16197 Ketoacyl-synthetase C-terminal extension KD35_RS17965 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS17965 PF00550 Phosphopantetheine attachment site KD35_RS17965 PF08659 KR domain KD35_RS17965 PF14765 Polyketide synthase dehydratase KD35_RS17965 PF00698 Acyl transferase domain KD35_RS17965 PF02801 Beta-ketoacyl synthase, C-terminal domain KD35_RS17975 PF00106 short chain dehydrogenase KD35_RS17980 PF07504 Fungalysin/Thermolysin Propeptide Motif KD35_RS17980 PF03413 Peptidase propeptide and YPEB domain KD35_RS17980 PF01447 Thermolysin metallopeptidase, catalytic domain KD35_RS17980 PF02868 Thermolysin metallopeptidase, alpha-helical domain KD35_RS18000 PF00248 Aldo/keto reductase family KD35_RS18005 PF07690 Major Facilitator Superfamily KD35_RS18015 PF03928 Haem-degrading KD35_RS18020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS18050 PF03960 ArsC family KD35_RS18060 PF01638 HxlR-like helix-turn-helix KD35_RS18065 PF07702 UTRA domain KD35_RS18065 PF00392 Bacterial regulatory proteins, gntR family KD35_RS18080 PF01638 HxlR-like helix-turn-helix KD35_RS18085 PF01638 HxlR-like helix-turn-helix KD35_RS18090 PF00248 Aldo/keto reductase family KD35_RS18120 PF02567 Phenazine biosynthesis-like protein KD35_RS18140 PF13193 AMP-binding enzyme C-terminal domain KD35_RS18140 PF00501 AMP-binding enzyme KD35_RS18150 PF01638 HxlR-like helix-turn-helix KD35_RS18170 PF01022 Bacterial regulatory protein, arsR family KD35_RS18180 PF12791 Anti-sigma factor N-terminus KD35_RS18185 PF04542 Sigma-70 region 2 KD35_RS18200 PF00440 Bacterial regulatory proteins, tetR family KD35_RS18220 PF05656 Protein of unknown function (DUF805) KD35_RS18225 PF01061 ABC-2 type transporter KD35_RS18230 PF00005 ABC transporter KD35_RS18230 PF13732 Domain of unknown function (DUF4162) KD35_RS18245 PF03063 Prismane/CO dehydrogenase family KD35_RS18255 PF00753 Metallo-beta-lactamase superfamily KD35_RS18260 PF01471 Putative peptidoglycan binding domain KD35_RS18260 PF01183 Glycosyl hydrolases family 25 KD35_RS18285 PF00144 Beta-lactamase KD35_RS18325 PF00753 Metallo-beta-lactamase superfamily KD35_RS18330 PF00107 Zinc-binding dehydrogenase KD35_RS18330 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS18335 PF00324 Amino acid permease KD35_RS18340 PF07690 Major Facilitator Superfamily KD35_RS18370 PF02585 GlcNAc-PI de-N-acetylase KD35_RS18375 PF08830 Protein of unknown function (DUF1806) KD35_RS18380 PF03600 Citrate transporter KD35_RS18400 PF01497 Periplasmic binding protein KD35_RS18410 PF01032 FecCD transport family KD35_RS18415 PF01032 FecCD transport family KD35_RS18420 PF05675 Protein of unknown function (DUF817) KD35_RS18425 PF02567 Phenazine biosynthesis-like protein KD35_RS18430 PF13170 Protein of unknown function (DUF4003) KD35_RS18445 PF10901 Protein of unknown function (DUF2690) KD35_RS18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS18455 PF03466 LysR substrate binding domain KD35_RS18460 PF00107 Zinc-binding dehydrogenase KD35_RS18460 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS18475 PF00488 MutS domain V KD35_RS18475 PF01713 Smr domain KD35_RS18485 PF09154 Domain of unknown function (DUF1939) KD35_RS18485 PF00128 Alpha amylase, catalytic domain KD35_RS18490 PF00797 N-acetyltransferase KD35_RS18500 PF00144 Beta-lactamase KD35_RS18510 PF07690 Major Facilitator Superfamily KD35_RS18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS18515 PF03466 LysR substrate binding domain KD35_RS18530 PF03009 Glycerophosphoryl diester phosphodiesterase family KD35_RS18550 PF01494 FAD binding domain KD35_RS18555 PF01022 Bacterial regulatory protein, arsR family KD35_RS18560 PF08240 Alcohol dehydrogenase GroES-like domain KD35_RS18560 PF00107 Zinc-binding dehydrogenase KD35_RS18565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KD35_RS18580 PF04299 Putative FMN-binding domain KD35_RS18585 PF04229 GrpB protein KD35_RS18595 PF01758 Sodium Bile acid symporter family KD35_RS18600 PF02913 FAD linked oxidases, C-terminal domain KD35_RS18600 PF01565 FAD binding domain KD35_RS18625 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS18630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KD35_RS18635 PF00535 Glycosyl transferase family 2 KD35_RS18640 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS18645 PF18496 Collagenase G catalytic helper subdomain KD35_RS18645 PF01752 Collagenase KD35_RS18645 PF08453 Peptidase family M9 N-terminal KD35_RS18650 PF02308 MgtC family KD35_RS18660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS18665 PF04294 VanW like protein KD35_RS18675 PF13037 Domain of unknown function (DUF3898) KD35_RS18675 PF13039 Protein of unknown function (DUF3900) KD35_RS18695 PF00313 'Cold-shock' DNA-binding domain KD35_RS18705 PF00258 Flavodoxin KD35_RS18715 PF00293 NUDIX domain KD35_RS18725 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS18735 PF00106 short chain dehydrogenase KD35_RS18745 PF00206 Lyase KD35_RS18745 PF14698 Argininosuccinate lyase C-terminal KD35_RS18755 PF01156 Inosine-uridine preferring nucleoside hydrolase KD35_RS18760 PF00474 Sodium:solute symporter family KD35_RS18770 PF00171 Aldehyde dehydrogenase family KD35_RS18780 PF14151 YfhD-like protein KD35_RS18785 PF13249 Squalene-hopene cyclase N-terminal domain KD35_RS18785 PF13243 Squalene-hopene cyclase C-terminal domain KD35_RS18790 PF02681 Divergent PAP2 family KD35_RS18795 PF00892 EamA-like transporter family KD35_RS18800 PF06961 Protein of unknown function (DUF1294) KD35_RS18815 PF10609 NUBPL iron-transfer P-loop NTPase KD35_RS18825 PF02391 MoaE protein KD35_RS18830 PF03453 MoeA N-terminal region (domain I and II) KD35_RS18830 PF03454 MoeA C-terminal region (domain IV) KD35_RS18830 PF00994 Probable molybdopterin binding domain KD35_RS18835 PF00899 ThiF family KD35_RS18840 PF01226 Formate/nitrite transporter KD35_RS18845 PF04055 Radical SAM superfamily KD35_RS18845 PF06463 Molybdenum Cofactor Synthesis C KD35_RS18850 PF02634 FdhD/NarQ family KD35_RS18855 PF10057 Uncharacterized conserved protein (DUF2294) KD35_RS18860 PF07849 Protein of unknown function (DUF1641) KD35_RS18865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KD35_RS18865 PF01568 Molydopterin dinucleotide binding domain KD35_RS18865 PF00384 Molybdopterin oxidoreductase KD35_RS18865 PF00037 4Fe-4S binding domain KD35_RS18865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KD35_RS18875 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS18915 PF08241 Methyltransferase domain KD35_RS18920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS18925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS18930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS18935 PF00375 Sodium:dicarboxylate symporter family KD35_RS18940 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS18950 PF08281 Sigma-70, region 4 KD35_RS18950 PF04542 Sigma-70 region 2 KD35_RS18975 PF00005 ABC transporter KD35_RS18975 PF13732 Domain of unknown function (DUF4162) KD35_RS18985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KD35_RS18985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KD35_RS18990 PF03989 DNA gyrase C-terminal domain, beta-propeller KD35_RS18990 PF00521 DNA gyrase/topoisomerase IV, subunit A KD35_RS18995 PF00204 DNA gyrase B KD35_RS18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS18995 PF01751 Toprim domain KD35_RS18995 PF00986 DNA gyrase B subunit, carboxyl terminus KD35_RS19005 PF13380 CoA binding domain KD35_RS19010 PF13180 PDZ domain KD35_RS19015 PF00072 Response regulator receiver domain KD35_RS19015 PF00486 Transcriptional regulatory protein, C terminal KD35_RS19020 PF04055 Radical SAM superfamily KD35_RS19025 PF13597 Anaerobic ribonucleoside-triphosphate reductase KD35_RS19025 PF03477 ATP cone domain KD35_RS19030 PF02660 Glycerol-3-phosphate acyltransferase KD35_RS19035 PF01521 Iron-sulphur cluster biosynthesis KD35_RS19040 PF03061 Thioesterase superfamily KD35_RS19045 PF00704 Glycosyl hydrolases family 18 KD35_RS19045 PF01476 LysM domain KD35_RS19055 PF08177 Small acid-soluble spore protein N family KD35_RS19060 PF13040 Fur-regulated basic protein B KD35_RS19065 PF00929 Exonuclease KD35_RS19065 PF01336 OB-fold nucleic acid binding domain KD35_RS19065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KD35_RS19065 PF14579 Helix-hairpin-helix motif KD35_RS19065 PF07733 Bacterial DNA polymerase III alpha NTPase domain KD35_RS19065 PF11490 DNA polymerase III polC-type N-terminus II KD35_RS19065 PF02811 PHP domain KD35_RS19070 PF00578 AhpC/TSA family KD35_RS19080 PF03412 Peptidase C39 family KD35_RS19080 PF00664 ABC transporter transmembrane region KD35_RS19080 PF00005 ABC transporter KD35_RS19085 PF00694 Aconitase C-terminal domain KD35_RS19085 PF00330 Aconitase family (aconitate hydratase) KD35_RS19095 PF01522 Polysaccharide deacetylase KD35_RS19115 PF07690 Major Facilitator Superfamily KD35_RS19125 PF01411 tRNA synthetases class II (A) KD35_RS19125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KD35_RS19125 PF02272 DHHA1 domain KD35_RS19130 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS19130 PF00293 NUDIX domain KD35_RS19140 PF00108 Thiolase, N-terminal domain KD35_RS19140 PF02803 Thiolase, C-terminal domain KD35_RS19145 PF00501 AMP-binding enzyme KD35_RS19145 PF13193 AMP-binding enzyme C-terminal domain KD35_RS19150 PF02632 BioY family KD35_RS19155 PF13193 AMP-binding enzyme C-terminal domain KD35_RS19155 PF00501 AMP-binding enzyme KD35_RS19170 PF05532 CsbD-like KD35_RS19200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS19200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS19210 PF00989 PAS fold KD35_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS19210 PF13188 PAS domain KD35_RS19210 PF13426 PAS domain KD35_RS19210 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS19215 PF01738 Dienelactone hydrolase family KD35_RS19220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS19225 PF00474 Sodium:solute symporter family KD35_RS19230 PF01645 Conserved region in glutamate synthase KD35_RS19235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KD35_RS19240 PF02559 CarD-like/TRCF domain KD35_RS19245 PF00491 Arginase family KD35_RS19250 PF01979 Amidohydrolase family KD35_RS19255 PF17392 Urocanase C-terminal domain KD35_RS19255 PF01175 Urocanase Rossmann-like domain KD35_RS19255 PF17391 Urocanase N-terminal domain KD35_RS19260 PF00221 Aromatic amino acid lyase KD35_RS19265 PF09021 HutP KD35_RS19270 PF01209 ubiE/COQ5 methyltransferase family KD35_RS19295 PF11084 Protein of unknown function (DUF2621) KD35_RS19325 PF07301 Protein of unknown function (DUF1453) KD35_RS19330 PF02683 Cytochrome C biogenesis protein transmembrane region KD35_RS19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS19340 PF03466 LysR substrate binding domain KD35_RS19345 PF03788 LrgA family KD35_RS19350 PF04172 LrgB-like family KD35_RS19355 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS19355 PF00293 NUDIX domain KD35_RS19365 PF01925 Sulfite exporter TauE/SafE KD35_RS19375 PF01510 N-acetylmuramoyl-L-alanine amidase KD35_RS19375 PF01471 Putative peptidoglycan binding domain KD35_RS19390 PF00005 ABC transporter KD35_RS19390 PF00664 ABC transporter transmembrane region KD35_RS19395 PF00005 ABC transporter KD35_RS19395 PF00664 ABC transporter transmembrane region KD35_RS19400 PF03672 Uncharacterised protein family (UPF0154) KD35_RS19405 PF10747 Sporulation inhibitor of replication protein SirA KD35_RS19410 PF00456 Transketolase, thiamine diphosphate binding domain KD35_RS19410 PF02780 Transketolase, C-terminal domain KD35_RS19410 PF02779 Transketolase, pyrimidine binding domain KD35_RS19415 PF01385 Probable transposase KD35_RS19415 PF07282 Putative transposase DNA-binding domain KD35_RS19415 PF12323 Helix-turn-helix domain KD35_RS19425 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS19430 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS19435 PF00005 ABC transporter KD35_RS19450 PF02872 5'-nucleotidase, C-terminal domain KD35_RS19450 PF00149 Calcineurin-like phosphoesterase KD35_RS19455 PF05979 Bacterial protein of unknown function (DUF896) KD35_RS19460 PF00239 Resolvase, N terminal domain KD35_RS19465 PF00717 Peptidase S24-like KD35_RS19465 PF01726 LexA DNA binding domain KD35_RS19480 PF03551 Transcriptional regulator PadR-like family KD35_RS19515 PF01510 N-acetylmuramoyl-L-alanine amidase KD35_RS19515 PF01476 LysM domain KD35_RS19515 PF01471 Putative peptidoglycan binding domain KD35_RS19520 PF05105 Bacteriophage holin family KD35_RS19680 PF08281 Sigma-70, region 4 KD35_RS19725 PF02511 Thymidylate synthase complementing protein KD35_RS19730 PF00145 C-5 cytosine-specific DNA methylase KD35_RS19805 PF01381 Helix-turn-helix KD35_RS19825 PF02899 Phage integrase, N-terminal SAM-like domain KD35_RS19825 PF00589 Phage integrase family KD35_RS19830 PF00120 Glutamine synthetase, catalytic domain KD35_RS19830 PF03951 Glutamine synthetase, beta-Grasp domain KD35_RS19835 PF13411 MerR HTH family regulatory protein KD35_RS19840 PF06838 Methionine gamma-lyase KD35_RS19850 PF03458 UPF0126 domain KD35_RS19855 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS19855 PF17866 AAA lid domain KD35_RS19870 PF17209 Hfq protein KD35_RS19885 PF06725 3D domain KD35_RS19885 PF01476 LysM domain KD35_RS19890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KD35_RS19890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KD35_RS19895 PF00294 pfkB family carbohydrate kinase KD35_RS19900 PF08220 DeoR-like helix-turn-helix domain KD35_RS19900 PF00455 DeoR C terminal sensor domain KD35_RS19910 PF04238 Protein of unknown function (DUF420) KD35_RS19925 PF00324 Amino acid permease KD35_RS19930 PF00704 Glycosyl hydrolases family 18 KD35_RS19930 PF00041 Fibronectin type III domain KD35_RS19935 PF10518 TAT (twin-arginine translocation) pathway signal sequence KD35_RS19935 PF00149 Calcineurin-like phosphoesterase KD35_RS19940 PF01226 Formate/nitrite transporter KD35_RS19945 PF00216 Bacterial DNA-binding protein KD35_RS19950 PF00403 Heavy-metal-associated domain KD35_RS19955 PF00403 Heavy-metal-associated domain KD35_RS19960 PF02583 Metal-sensitive transcriptional repressor KD35_RS19970 PF00756 Putative esterase KD35_RS19975 PF00005 ABC transporter KD35_RS19980 PF01032 FecCD transport family KD35_RS19985 PF01032 FecCD transport family KD35_RS19990 PF01497 Periplasmic binding protein KD35_RS20000 PF03372 Endonuclease/Exonuclease/phosphatase family KD35_RS20005 PF12833 Helix-turn-helix domain KD35_RS20005 PF02805 Metal binding domain of Ada KD35_RS20010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KD35_RS20010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KD35_RS20015 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KD35_RS20015 PF00730 HhH-GPD superfamily base excision DNA repair protein KD35_RS20020 PF07687 Peptidase dimerisation domain KD35_RS20020 PF01546 Peptidase family M20/M25/M40 KD35_RS20040 PF00561 alpha/beta hydrolase fold KD35_RS20045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS20050 PF03707 Bacterial signalling protein N terminal repeat KD35_RS20050 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS20050 PF00563 EAL domain KD35_RS20065 PF10787 Uncharacterised protein from bacillus cereus group KD35_RS20070 PF04172 LrgB-like family KD35_RS20075 PF03788 LrgA family KD35_RS20080 PF00155 Aminotransferase class I and II KD35_RS20080 PF00392 Bacterial regulatory proteins, gntR family KD35_RS20085 PF00561 alpha/beta hydrolase fold KD35_RS20085 PF00364 Biotin-requiring enzyme KD35_RS20090 PF02585 GlcNAc-PI de-N-acetylase KD35_RS20100 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KD35_RS20105 PF00082 Subtilase family KD35_RS20110 PF07486 Cell Wall Hydrolase KD35_RS20115 PF03275 UDP-galactopyranose mutase KD35_RS20120 PF00884 Sulfatase KD35_RS20125 PF00350 Dynamin family KD35_RS20135 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KD35_RS20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS20140 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS20145 PF00072 Response regulator receiver domain KD35_RS20145 PF00486 Transcriptional regulatory protein, C terminal KD35_RS20160 PF00005 ABC transporter KD35_RS20165 PF08676 MutL C terminal dimerisation domain KD35_RS20165 PF01119 DNA mismatch repair protein, C-terminal domain KD35_RS20170 PF01624 MutS domain I KD35_RS20170 PF05188 MutS domain II KD35_RS20170 PF05192 MutS domain III KD35_RS20170 PF05190 MutS family domain IV KD35_RS20170 PF00488 MutS domain V KD35_RS20175 PF10628 Outer spore coat protein E (CotE) KD35_RS20180 PF06133 Control of competence regulator ComK, YlbF/YmcA KD35_RS20185 PF04055 Radical SAM superfamily KD35_RS20185 PF01938 TRAM domain KD35_RS20185 PF00919 Uncharacterized protein family UPF0004 KD35_RS20190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS20195 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KD35_RS20195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KD35_RS20195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KD35_RS20200 PF01244 Membrane dipeptidase (Peptidase family M19) KD35_RS20205 PF04232 Stage V sporulation protein S (SpoVS) KD35_RS20210 PF13277 YmdB-like protein KD35_RS20215 PF12072 Domain of unknown function (DUF3552) KD35_RS20215 PF00013 KH domain KD35_RS20215 PF01966 HD domain KD35_RS20225 PF00154 recA bacterial DNA recombination protein KD35_RS20230 PF00994 Probable molybdopterin binding domain KD35_RS20230 PF18146 Damage-inducible protein CinA KH domain KD35_RS20230 PF02464 Competence-damaged protein KD35_RS20235 PF01066 CDP-alcohol phosphatidyltransferase KD35_RS20240 PF13464 Domain of unknown function (DUF4115) KD35_RS20245 PF11868 Protein of unknown function (DUF3388) KD35_RS20250 PF11588 Protein of unknown function (DUF3243) KD35_RS20260 PF05193 Peptidase M16 inactive domain KD35_RS20260 PF00675 Insulinase (Peptidase family M16) KD35_RS20265 PF05193 Peptidase M16 inactive domain KD35_RS20270 PF02653 Branched-chain amino acid transport system / permease component KD35_RS20275 PF02653 Branched-chain amino acid transport system / permease component KD35_RS20280 PF02653 Branched-chain amino acid transport system / permease component KD35_RS20285 PF00005 ABC transporter KD35_RS20290 PF02608 ABC transporter substrate-binding protein PnrA-like KD35_RS20295 PF00392 Bacterial regulatory proteins, gntR family KD35_RS20295 PF07702 UTRA domain KD35_RS20300 PF17854 FtsK alpha domain KD35_RS20300 PF09397 Ftsk gamma domain KD35_RS20300 PF01580 FtsK/SpoIIIE family KD35_RS20305 PF14035 YlzJ-like protein KD35_RS20310 PF00574 Clp protease KD35_RS20315 PF00753 Metallo-beta-lactamase superfamily KD35_RS20315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KD35_RS20315 PF17770 Ribonuclease J C-terminal domain KD35_RS20325 PF00701 Dihydrodipicolinate synthetase family KD35_RS20330 PF00696 Amino acid kinase family KD35_RS20330 PF13840 ACT domain KD35_RS20335 PF02774 Semialdehyde dehydrogenase, dimerisation domain KD35_RS20335 PF01118 Semialdehyde dehydrogenase, NAD binding domain KD35_RS20340 PF02441 Flavoprotein KD35_RS20345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KD35_RS20345 PF16924 Dipicolinate synthase subunit A N-terminal domain KD35_RS20350 PF05239 PRC-barrel domain KD35_RS20355 PF05193 Peptidase M16 inactive domain KD35_RS20355 PF00675 Insulinase (Peptidase family M16) KD35_RS20360 PF01522 Polysaccharide deacetylase KD35_RS20365 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KD35_RS20365 PF00013 KH domain KD35_RS20365 PF03725 3' exoribonuclease family, domain 2 KD35_RS20365 PF00575 S1 RNA binding domain KD35_RS20365 PF01138 3' exoribonuclease family, domain 1 KD35_RS20370 PF00312 Ribosomal protein S15 KD35_RS20375 PF01687 Riboflavin kinase KD35_RS20375 PF06574 FAD synthetase KD35_RS20380 PF01509 TruB family pseudouridylate synthase (N terminal domain) KD35_RS20380 PF16198 tRNA pseudouridylate synthase B C-terminal domain KD35_RS20385 PF02033 Ribosome-binding factor A KD35_RS20390 PF04456 Protein of unknown function (DUF503) KD35_RS20395 PF04760 Translation initiation factor IF-2, N-terminal region KD35_RS20395 PF11987 Translation-initiation factor 2 KD35_RS20395 PF00009 Elongation factor Tu GTP binding domain KD35_RS20400 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KD35_RS20405 PF04296 Protein of unknown function (DUF448) KD35_RS20410 PF13184 NusA-like KH domain KD35_RS20410 PF00575 S1 RNA binding domain KD35_RS20410 PF08529 NusA N-terminal domain KD35_RS20415 PF02576 RimP N-terminal domain KD35_RS20415 PF17384 RimP C-terminal SH3 domain KD35_RS20420 PF02811 PHP domain KD35_RS20420 PF14579 Helix-hairpin-helix motif KD35_RS20420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KD35_RS20420 PF07733 Bacterial DNA polymerase III alpha NTPase domain KD35_RS20420 PF11490 DNA polymerase III polC-type N-terminus II KD35_RS20420 PF00929 Exonuclease KD35_RS20420 PF14480 DNA polymerase III polC-type N-terminus I KD35_RS20425 PF04073 Aminoacyl-tRNA editing domain KD35_RS20425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS20425 PF03129 Anticodon binding domain KD35_RS20430 PF02163 Peptidase family M50 KD35_RS20430 PF17820 PDZ domain KD35_RS20435 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KD35_RS20435 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KD35_RS20435 PF13288 DXP reductoisomerase C-terminal domain KD35_RS20445 PF01255 Putative undecaprenyl diphosphate synthase KD35_RS20450 PF01765 Ribosome recycling factor KD35_RS20455 PF00696 Amino acid kinase family KD35_RS20460 PF00889 Elongation factor TS KD35_RS20465 PF00318 Ribosomal protein S2 KD35_RS20470 PF08222 CodY helix-turn-helix domain KD35_RS20470 PF06018 CodY GAF-like domain KD35_RS20475 PF10431 C-terminal, D2-small domain, of ClpB protein KD35_RS20475 PF07724 AAA domain (Cdc48 subfamily) KD35_RS20475 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS20480 PF00227 Proteasome subunit KD35_RS20485 PF02899 Phage integrase, N-terminal SAM-like domain KD35_RS20485 PF00589 Phage integrase family KD35_RS20490 PF01134 Glucose inhibited division protein A KD35_RS20495 PF01131 DNA topoisomerase KD35_RS20495 PF01396 Topoisomerase DNA binding C4 zinc finger KD35_RS20495 PF01751 Toprim domain KD35_RS20505 PF02629 CoA binding domain KD35_RS20505 PF00549 CoA-ligase KD35_RS20510 PF08442 ATP-grasp domain KD35_RS20510 PF00549 CoA-ligase KD35_RS20515 PF01351 Ribonuclease HII KD35_RS20520 PF01926 50S ribosome-binding GTPase KD35_RS20525 PF10502 Signal peptidase, peptidase S26 KD35_RS20530 PF01245 Ribosomal protein L19 KD35_RS20535 PF01746 tRNA (Guanine-1)-methyltransferase KD35_RS20540 PF01782 RimM N-terminal domain KD35_RS20540 PF05239 PRC-barrel domain KD35_RS20550 PF00886 Ribosomal protein S16 KD35_RS20555 PF00448 SRP54-type protein, GTPase domain KD35_RS20555 PF02881 SRP54-type protein, helical bundle domain KD35_RS20555 PF02978 Signal peptide binding domain KD35_RS20560 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KD35_RS20565 PF00448 SRP54-type protein, GTPase domain KD35_RS20565 PF02881 SRP54-type protein, helical bundle domain KD35_RS20570 PF02463 RecF/RecN/SMC N terminal domain KD35_RS20570 PF06470 SMC proteins Flexible Hinge Domain KD35_RS20575 PF14622 Ribonuclease-III-like KD35_RS20575 PF00035 Double-stranded RNA binding motif KD35_RS20580 PF00550 Phosphopantetheine attachment site KD35_RS20590 PF00698 Acyl transferase domain KD35_RS20595 PF02504 Fatty acid synthesis protein KD35_RS20600 PF03061 Thioesterase superfamily KD35_RS20605 PF17191 RecG wedge domain KD35_RS20605 PF00270 DEAD/DEAH box helicase KD35_RS20605 PF00271 Helicase conserved C-terminal domain KD35_RS20610 PF02734 DAK2 domain KD35_RS20610 PF13684 Dihydroxyacetone kinase family KD35_RS20615 PF03780 Asp23 family, cell envelope-related function KD35_RS20620 PF00830 Ribosomal L28 family KD35_RS20625 PF08183 Stage V sporulation protein family KD35_RS20630 PF04263 Thiamin pyrophosphokinase, catalytic domain KD35_RS20630 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KD35_RS20635 PF00834 Ribulose-phosphate 3 epimerase family KD35_RS20640 PF03193 RsgA GTPase KD35_RS20640 PF16745 RsgA N-terminal domain KD35_RS20645 PF00069 Protein kinase domain KD35_RS20645 PF03793 PASTA domain KD35_RS20655 PF04055 Radical SAM superfamily KD35_RS20660 PF01189 16S rRNA methyltransferase RsmB/F KD35_RS20660 PF01029 NusB family KD35_RS20665 PF02911 Formyl transferase, C-terminal domain KD35_RS20665 PF00551 Formyl transferase KD35_RS20670 PF01327 Polypeptide deformylase KD35_RS20675 PF00271 Helicase conserved C-terminal domain KD35_RS20675 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KD35_RS20675 PF18074 Primosomal protein N C-terminal domain KD35_RS20675 PF17764 3′ DNA-binding domain (3′BD) KD35_RS20675 PF04851 Type III restriction enzyme, res subunit KD35_RS20680 PF02441 Flavoprotein KD35_RS20680 PF04127 DNA / pantothenate metabolism flavoprotein KD35_RS20685 PF01192 RNA polymerase Rpb6 KD35_RS20690 PF00625 Guanylate kinase KD35_RS20695 PF04025 Domain of unknown function (DUF370) KD35_RS20700 PF08340 Domain of unknown function (DUF1732) KD35_RS20700 PF03755 YicC-like family, N-terminal region KD35_RS20705 PF00690 Cation transporter/ATPase, N-terminus KD35_RS20705 PF00689 Cation transporting ATPase, C-terminus KD35_RS20710 PF05670 NFACT protein RNA binding domain KD35_RS20715 PF01321 Creatinase/Prolidase N-terminal domain KD35_RS20715 PF00557 Metallopeptidase family M24 KD35_RS20745 PF00156 Phosphoribosyl transferase domain KD35_RS20750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KD35_RS20755 PF01180 Dihydroorotate dehydrogenase KD35_RS20760 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KD35_RS20760 PF00175 Oxidoreductase NAD-binding domain KD35_RS20765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KD35_RS20765 PF02142 MGS-like domain KD35_RS20765 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KD35_RS20770 PF00117 Glutamine amidotransferase class-I KD35_RS20770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KD35_RS20775 PF01979 Amidohydrolase family KD35_RS20780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KD35_RS20780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KD35_RS20785 PF00860 Permease family KD35_RS20790 PF00156 Phosphoribosyl transferase domain KD35_RS20795 PF00849 RNA pseudouridylate synthase KD35_RS20795 PF01479 S4 domain KD35_RS20800 PF01252 Signal peptidase (SPase) II KD35_RS20810 PF00133 tRNA synthetases class I (I, L, M and V) KD35_RS20810 PF06827 Zinc finger found in FPG and IleRS KD35_RS20810 PF08264 Anticodon-binding domain of tRNA KD35_RS20815 PF05103 DivIVA protein KD35_RS20820 PF01479 S4 domain KD35_RS20820 PF17774 Putative RNA-binding domain in YlmH KD35_RS20825 PF02325 YGGT family KD35_RS20830 PF04472 Cell division protein SepF KD35_RS20835 PF01168 Alanine racemase, N-terminal domain KD35_RS20840 PF02578 Multi-copper polyphenol oxidoreductase laccase KD35_RS20845 PF05239 PRC-barrel domain KD35_RS20850 PF04542 Sigma-70 region 2 KD35_RS20850 PF04545 Sigma-70, region 4 KD35_RS20850 PF04539 Sigma-70 region 3 KD35_RS20855 PF04545 Sigma-70, region 4 KD35_RS20855 PF04542 Sigma-70 region 2 KD35_RS20860 PF03419 Sporulation factor SpoIIGA KD35_RS20865 PF12327 FtsZ family, C-terminal domain KD35_RS20865 PF00091 Tubulin/FtsZ family, GTPase domain KD35_RS20870 PF02491 SHS2 domain inserted in FTSA KD35_RS20875 PF03799 Cell division protein FtsQ KD35_RS20875 PF08478 POTRA domain, FtsQ-type KD35_RS20880 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KD35_RS20880 PF01565 FAD binding domain KD35_RS20885 PF03033 Glycosyltransferase family 28 N-terminal domain KD35_RS20885 PF04101 Glycosyltransferase family 28 C-terminal domain KD35_RS20890 PF01098 Cell cycle protein KD35_RS20895 PF02875 Mur ligase family, glutamate ligase domain KD35_RS20895 PF08245 Mur ligase middle domain KD35_RS20900 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KD35_RS20900 PF00953 Glycosyl transferase family 4 KD35_RS20905 PF02875 Mur ligase family, glutamate ligase domain KD35_RS20905 PF01225 Mur ligase family, catalytic domain KD35_RS20905 PF08245 Mur ligase middle domain KD35_RS20910 PF00905 Penicillin binding protein transpeptidase domain KD35_RS20910 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS20910 PF03793 PASTA domain KD35_RS20915 PF00905 Penicillin binding protein transpeptidase domain KD35_RS20915 PF03793 PASTA domain KD35_RS20915 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS20920 PF04977 Septum formation initiator KD35_RS20925 PF01795 MraW methylase family KD35_RS20930 PF10079 Bacillithiol biosynthesis BshC KD35_RS20935 PF02558 Ketopantoate reductase PanE/ApbA KD35_RS20935 PF08546 Ketopantoate reductase PanE/ApbA C terminal KD35_RS20940 PF00583 Acetyltransferase (GNAT) family KD35_RS20950 PF01783 Ribosomal L32p protein family KD35_RS20955 PF02620 Large ribosomal RNA subunit accumulation protein YceD KD35_RS21000 PF12123 N-acetylmuramoyl-l-alanine amidase KD35_RS21000 PF01510 N-acetylmuramoyl-L-alanine amidase KD35_RS21005 PF05105 Bacteriophage holin family KD35_RS21090 PF00574 Clp protease KD35_RS21100 PF03354 Phage Terminase KD35_RS21120 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KD35_RS21125 PF00589 Phage integrase family KD35_RS21180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS21195 PF00692 dUTPase KD35_RS21205 PF04545 Sigma-70, region 4 KD35_RS21205 PF04539 Sigma-70 region 3 KD35_RS21205 PF04542 Sigma-70 region 2 KD35_RS21230 PF01695 IstB-like ATP binding protein KD35_RS21230 PF07319 Primosomal protein DnaI N-terminus KD35_RS21260 PF01381 Helix-turn-helix KD35_RS21270 PF01381 Helix-turn-helix KD35_RS21285 PF14659 Phage integrase, N-terminal SAM-like domain KD35_RS21285 PF00589 Phage integrase family KD35_RS21290 PF05636 HIGH Nucleotidyl Transferase KD35_RS21295 PF05362 Lon protease (S16) C-terminal proteolytic domain KD35_RS21295 PF13180 PDZ domain KD35_RS21300 PF01734 Patatin-like phospholipase KD35_RS21305 PF07670 Nucleoside recognition KD35_RS21310 PF01467 Cytidylyltransferase-like KD35_RS21325 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KD35_RS21330 PF06133 Control of competence regulator ComK, YlbF/YmcA KD35_RS21335 PF00300 Histidine phosphatase superfamily (branch 1) KD35_RS21340 PF14003 YlbE-like protein KD35_RS21345 PF14071 Putative coat protein KD35_RS21350 PF00188 Cysteine-rich secretory protein family KD35_RS21350 PF14504 CAP-associated N-terminal KD35_RS21355 PF08868 YugN-like family KD35_RS21360 PF00795 Carbon-nitrogen hydrolase KD35_RS21365 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KD35_RS21370 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KD35_RS21375 PF00510 Cytochrome c oxidase subunit III KD35_RS21380 PF00115 Cytochrome C and Quinol oxidase polypeptide I KD35_RS21385 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KD35_RS21385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KD35_RS21385 PF00034 Cytochrome c KD35_RS21390 PF01040 UbiA prenyltransferase family KD35_RS21395 PF02628 Cytochrome oxidase assembly protein KD35_RS21400 PF02436 Conserved carboxylase domain KD35_RS21400 PF00682 HMGL-like KD35_RS21400 PF00364 Biotin-requiring enzyme KD35_RS21400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KD35_RS21400 PF02785 Biotin carboxylase C-terminal domain KD35_RS21400 PF00289 Biotin carboxylase, N-terminal domain KD35_RS21405 PF01098 Cell cycle protein KD35_RS21410 PF07408 Protein of unknown function (DUF1507) KD35_RS21420 PF02562 PhoH-like protein KD35_RS21420 PF13638 PIN domain KD35_RS21430 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KD35_RS21440 PF14036 YlaH-like protein KD35_RS21445 PF14492 Elongation Factor G, domain II KD35_RS21445 PF03144 Elongation factor Tu domain 2 KD35_RS21445 PF00679 Elongation factor G C-terminus KD35_RS21445 PF00009 Elongation factor Tu GTP binding domain KD35_RS21455 PF00459 Inositol monophosphatase family KD35_RS21465 PF06335 Protein of unknown function (DUF1054) KD35_RS21470 PF05256 Uncharacterised protein family (UPF0223) KD35_RS21475 PF01276 Orn/Lys/Arg decarboxylase, major domain KD35_RS21475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KD35_RS21515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS21515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS21520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KD35_RS21520 PF00364 Biotin-requiring enzyme KD35_RS21520 PF02817 e3 binding domain KD35_RS21525 PF02779 Transketolase, pyrimidine binding domain KD35_RS21525 PF02780 Transketolase, C-terminal domain KD35_RS21530 PF00676 Dehydrogenase E1 component KD35_RS21540 PF01327 Polypeptide deformylase KD35_RS21550 PF07288 Protein of unknown function (DUF1447) KD35_RS21555 PF17770 Ribonuclease J C-terminal domain KD35_RS21555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KD35_RS21555 PF00753 Metallo-beta-lactamase superfamily KD35_RS21560 PF02080 TrkA-C domain KD35_RS21560 PF02254 TrkA-N domain KD35_RS21570 PF07687 Peptidase dimerisation domain KD35_RS21570 PF01546 Peptidase family M20/M25/M40 KD35_RS21575 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KD35_RS21575 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS21575 PF14602 Hexapeptide repeat of succinyl-transferase KD35_RS21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS21580 PF03466 LysR substrate binding domain KD35_RS21595 PF04308 Ribonuclease H-like KD35_RS21605 PF08796 Protein of unknown function (DUF1797) KD35_RS21620 PF00563 EAL domain KD35_RS21620 PF10388 EAL-domain associated signalling protein domain KD35_RS21630 PF00149 Calcineurin-like phosphoesterase KD35_RS21630 PF10518 TAT (twin-arginine translocation) pathway signal sequence KD35_RS21640 PF13089 Polyphosphate kinase N-terminal domain KD35_RS21640 PF17941 Polyphosphate kinase C-terminal domain 1 KD35_RS21640 PF02503 Polyphosphate kinase middle domain KD35_RS21640 PF13090 Polyphosphate kinase C-terminal domain 2 KD35_RS21645 PF02541 Ppx/GppA phosphatase family KD35_RS21650 PF14177 YkyB-like protein KD35_RS21680 PF07690 Major Facilitator Superfamily KD35_RS21695 PF08267 Cobalamin-independent synthase, N-terminal domain KD35_RS21695 PF01717 Cobalamin-independent synthase, Catalytic domain KD35_RS21705 PF14040 Deoxyribonuclease NucA/NucB KD35_RS21715 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS21715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS21725 PF00155 Aminotransferase class I and II KD35_RS21730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KD35_RS21730 PF00356 Bacterial regulatory proteins, lacI family KD35_RS21735 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS21740 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS21745 PF13416 Bacterial extracellular solute-binding protein KD35_RS21750 PF16657 Maltogenic Amylase, C-terminal domain KD35_RS21750 PF02903 Alpha amylase, N-terminal ig-like domain KD35_RS21750 PF00128 Alpha amylase, catalytic domain KD35_RS21755 PF00128 Alpha amylase, catalytic domain KD35_RS21755 PF16657 Maltogenic Amylase, C-terminal domain KD35_RS21760 PF03459 TOBE domain KD35_RS21760 PF00005 ABC transporter KD35_RS21760 PF17912 MalK OB fold domain KD35_RS21800 PF02803 Thiolase, C-terminal domain KD35_RS21800 PF00108 Thiolase, N-terminal domain KD35_RS21805 PF00293 NUDIX domain KD35_RS21840 PF03551 Transcriptional regulator PadR-like family KD35_RS21855 PF01008 Initiation factor 2 subunit family KD35_RS21860 PF01636 Phosphotransferase enzyme family KD35_RS21865 PF00795 Carbon-nitrogen hydrolase KD35_RS21870 PF00155 Aminotransferase class I and II KD35_RS21875 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KD35_RS21875 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KD35_RS21885 PF00596 Class II Aldolase and Adducin N-terminal domain KD35_RS21890 PF03079 ARD/ARD' family KD35_RS21910 PF00990 Diguanylate cyclase, GGDEF domain KD35_RS21910 PF08448 PAS fold KD35_RS21915 PF00881 Nitroreductase family KD35_RS21930 PF02896 PEP-utilising enzyme, TIM barrel domain KD35_RS21930 PF05524 PEP-utilising enzyme, N-terminal KD35_RS21930 PF00391 PEP-utilising enzyme, mobile domain KD35_RS21935 PF00381 PTS HPr component phosphorylation site KD35_RS21940 PF02378 Phosphotransferase system, EIIC KD35_RS21940 PF00367 phosphotransferase system, EIIB KD35_RS21940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KD35_RS21945 PF03123 CAT RNA binding domain KD35_RS21945 PF00874 PRD domain KD35_RS21955 PF00392 Bacterial regulatory proteins, gntR family KD35_RS21955 PF07702 UTRA domain KD35_RS21960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KD35_RS21965 PF01979 Amidohydrolase family KD35_RS21975 PF04079 Segregation and condensation complex subunit ScpB KD35_RS21985 PF02616 Segregation and condensation protein ScpA KD35_RS21995 PF03745 Domain of unknown function (DUF309) KD35_RS22000 PF00583 Acetyltransferase (GNAT) family KD35_RS22010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KD35_RS22015 PF06207 Protein of unknown function (DUF1002) KD35_RS22025 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS22030 PF14097 Stage V sporulation protein AE1 KD35_RS22035 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KD35_RS22040 PF07451 Stage V sporulation protein AD (SpoVAD) KD35_RS22045 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KD35_RS22050 PF13782 Stage V sporulation protein AB KD35_RS22055 PF12164 Stage V sporulation protein AA KD35_RS22065 PF00209 Sodium:neurotransmitter symporter family KD35_RS22070 PF04539 Sigma-70 region 3 KD35_RS22070 PF04542 Sigma-70 region 2 KD35_RS22070 PF04545 Sigma-70, region 4 KD35_RS22075 PF13581 Histidine kinase-like ATPase domain KD35_RS22080 PF01740 STAS domain KD35_RS22085 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS22085 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS22090 PF00392 Bacterial regulatory proteins, gntR family KD35_RS22095 PF00005 ABC transporter KD35_RS22115 PF01047 MarR family KD35_RS22125 PF00860 Permease family KD35_RS22130 PF01544 CorA-like Mg2+ transporter protein KD35_RS22135 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KD35_RS22135 PF00591 Glycosyl transferase family, a/b domain KD35_RS22135 PF02885 Glycosyl transferase family, helical bundle domain KD35_RS22140 PF01048 Phosphorylase superfamily KD35_RS22145 PF01676 Metalloenzyme superfamily KD35_RS22155 PF02899 Phage integrase, N-terminal SAM-like domain KD35_RS22155 PF00589 Phage integrase family KD35_RS22160 PF14004 Protein of unknown function (DUF4227) KD35_RS22165 PF01475 Ferric uptake regulator family KD35_RS22170 PF01944 Stage II sporulation protein M KD35_RS22180 PF00293 NUDIX domain KD35_RS22185 PF13072 Mother cell inhibitor of FtsZ KD35_RS22190 PF00248 Aldo/keto reductase family KD35_RS22195 PF00248 Aldo/keto reductase family KD35_RS22200 PF13673 Acetyltransferase (GNAT) domain KD35_RS22200 PF04229 GrpB protein KD35_RS22210 PF02872 5'-nucleotidase, C-terminal domain KD35_RS22210 PF00746 LPXTG cell wall anchor motif KD35_RS22210 PF00149 Calcineurin-like phosphoesterase KD35_RS22210 PF00565 Staphylococcal nuclease homologue KD35_RS22220 PF12146 Serine aminopeptidase, S33 KD35_RS22225 PF03553 Na+/H+ antiporter family KD35_RS22225 PF13726 Na+-H+ antiporter family KD35_RS22230 PF00356 Bacterial regulatory proteins, lacI family KD35_RS22235 PF00583 Acetyltransferase (GNAT) family KD35_RS22240 PF12146 Serine aminopeptidase, S33 KD35_RS22245 PF10827 Protein of unknown function (DUF2552) KD35_RS22255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KD35_RS22255 PF01872 RibD C-terminal domain KD35_RS22260 PF00677 Lumazine binding domain KD35_RS22265 PF00925 GTP cyclohydrolase II KD35_RS22265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KD35_RS22270 PF00885 6,7-dimethyl-8-ribityllumazine synthase KD35_RS22280 PF06968 Biotin and Thiamin Synthesis associated domain KD35_RS22280 PF04055 Radical SAM superfamily KD35_RS22285 PF13847 Methyltransferase domain KD35_RS22290 PF12697 Alpha/beta hydrolase family KD35_RS22290 PF08241 Methyltransferase domain KD35_RS22295 PF00155 Aminotransferase class I and II KD35_RS22305 PF00202 Aminotransferase class-III KD35_RS22315 PF03553 Na+/H+ antiporter family KD35_RS22320 PF02872 5'-nucleotidase, C-terminal domain KD35_RS22320 PF00149 Calcineurin-like phosphoesterase KD35_RS22330 PF01037 Lrp/AsnC ligand binding domain KD35_RS22330 PF13404 AsnC-type helix-turn-helix domain KD35_RS22345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KD35_RS22345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KD35_RS22350 PF00202 Aminotransferase class-III KD35_RS22355 PF00696 Amino acid kinase family KD35_RS22360 PF01960 ArgJ family KD35_RS22365 PF01118 Semialdehyde dehydrogenase, NAD binding domain KD35_RS22365 PF02774 Semialdehyde dehydrogenase, dimerisation domain KD35_RS22375 PF00106 short chain dehydrogenase KD35_RS22380 PF00753 Metallo-beta-lactamase superfamily KD35_RS22390 PF03807 NADP oxidoreductase coenzyme F420-dependent KD35_RS22390 PF14748 Pyrroline-5-carboxylate reductase dimerisation KD35_RS22395 PF03313 Serine dehydratase alpha chain KD35_RS22400 PF01842 ACT domain KD35_RS22400 PF03315 Serine dehydratase beta chain KD35_RS22410 PF00753 Metallo-beta-lactamase superfamily KD35_RS22410 PF12706 Beta-lactamase superfamily domain KD35_RS22420 PF00817 impB/mucB/samB family KD35_RS22420 PF11799 impB/mucB/samB family C-terminal domain KD35_RS22420 PF11798 IMS family HHH motif KD35_RS22430 PF01546 Peptidase family M20/M25/M40 KD35_RS22430 PF07687 Peptidase dimerisation domain KD35_RS22435 PF13302 Acetyltransferase (GNAT) domain KD35_RS22450 PF03734 L,D-transpeptidase catalytic domain KD35_RS22455 PF11728 Putative aromatic acid exporter C-terminal domain KD35_RS22455 PF06081 Aromatic acid exporter family member 1 KD35_RS22460 PF00005 ABC transporter KD35_RS22465 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS22470 PF00497 Bacterial extracellular solute-binding proteins, family 3 KD35_RS22475 PF06491 Disulphide isomerase KD35_RS22480 PF11208 Protein of unknown function (DUF2992) KD35_RS22490 PF01098 Cell cycle protein KD35_RS22500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KD35_RS22500 PF02817 e3 binding domain KD35_RS22500 PF00364 Biotin-requiring enzyme KD35_RS22505 PF02780 Transketolase, C-terminal domain KD35_RS22505 PF02779 Transketolase, pyrimidine binding domain KD35_RS22510 PF00676 Dehydrogenase E1 component KD35_RS22515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS22515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KD35_RS22520 PF00871 Acetokinase family KD35_RS22525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KD35_RS22525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KD35_RS22530 PF01515 Phosphate acetyl/butaryl transferase KD35_RS22540 PF02954 Bacterial regulatory protein, Fis family KD35_RS22540 PF00989 PAS fold KD35_RS22540 PF00158 Sigma-54 interaction domain KD35_RS22550 PF03009 Glycerophosphoryl diester phosphodiesterase family KD35_RS22555 PF14174 YycC-like protein KD35_RS22565 PF00072 Response regulator receiver domain KD35_RS22565 PF08769 Sporulation initiation factor Spo0A C terminal KD35_RS22575 PF05580 SpoIVB peptidase S55 KD35_RS22575 PF17820 PDZ domain KD35_RS22580 PF13476 AAA domain KD35_RS22585 PF01316 Arginine repressor, DNA binding domain KD35_RS22585 PF02863 Arginine repressor, C-terminal domain KD35_RS22590 PF01479 S4 domain KD35_RS22590 PF01728 FtsJ-like methyltransferase KD35_RS22595 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KD35_RS22595 PF02779 Transketolase, pyrimidine binding domain KD35_RS22595 PF02780 Transketolase, C-terminal domain KD35_RS22600 PF00348 Polyprenyl synthetase KD35_RS22605 PF02609 Exonuclease VII small subunit KD35_RS22610 PF02601 Exonuclease VII, large subunit KD35_RS22610 PF13742 OB-fold nucleic acid binding domain KD35_RS22615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KD35_RS22615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KD35_RS22620 PF01029 NusB family KD35_RS22625 PF03780 Asp23 family, cell envelope-related function KD35_RS22630 PF00289 Biotin carboxylase, N-terminal domain KD35_RS22630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KD35_RS22630 PF02785 Biotin carboxylase C-terminal domain KD35_RS22635 PF00364 Biotin-requiring enzyme KD35_RS22645 PF12685 SpoIIIAH-like protein KD35_RS22655 PF09581 Stage III sporulation protein AF (Spore_III_AF) KD35_RS22660 PF09546 Stage III sporulation protein AE (spore_III_AE) KD35_RS22665 PF06686 Stage III sporulation protein AC/AD protein family KD35_RS22670 PF06686 Stage III sporulation protein AC/AD protein family KD35_RS22675 PF09548 Stage III sporulation protein AB (spore_III_AB) KD35_RS22700 PF08207 Elongation factor P (EF-P) KOW-like domain KD35_RS22700 PF09285 Elongation factor P, C-terminal KD35_RS22700 PF01132 Elongation factor P (EF-P) OB domain KD35_RS22705 PF01321 Creatinase/Prolidase N-terminal domain KD35_RS22705 PF00557 Metallopeptidase family M24 KD35_RS22710 PF01220 Dehydroquinase class II KD35_RS22715 PF11085 Conserved membrane protein YqhR KD35_RS22720 PF07136 Protein of unknown function (DUF1385) KD35_RS22730 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS22735 PF01325 Iron dependent repressor, N-terminal DNA binding domain KD35_RS22735 PF02742 Iron dependent repressor, metal binding and dimerisation domain KD35_RS22750 PF03099 Biotin/lipoate A/B protein ligase family KD35_RS22755 PF00581 Rhodanese-like domain KD35_RS22760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KD35_RS22760 PF00356 Bacterial regulatory proteins, lacI family KD35_RS22770 PF00893 Small Multidrug Resistance protein KD35_RS22775 PF00893 Small Multidrug Resistance protein KD35_RS22815 PF00005 ABC transporter KD35_RS22820 PF00392 Bacterial regulatory proteins, gntR family KD35_RS22835 PF02347 Glycine cleavage system P-protein KD35_RS22840 PF02347 Glycine cleavage system P-protein KD35_RS22845 PF08669 Glycine cleavage T-protein C-terminal barrel domain KD35_RS22845 PF01571 Aminomethyltransferase folate-binding domain KD35_RS22850 PF00176 SNF2 family N-terminal domain KD35_RS22850 PF00271 Helicase conserved C-terminal domain KD35_RS22855 PF11079 Bacterial protein YqhG of unknown function KD35_RS22875 PF14038 YqzE-like protein KD35_RS22880 PF01202 Shikimate kinase KD35_RS22905 PF07963 Prokaryotic N-terminal methylation motif KD35_RS22915 PF00482 Type II secretion system (T2SS), protein F KD35_RS22920 PF00437 Type II/IV secretion system protein KD35_RS22930 PF11117 Protein of unknown function (DUF2626) KD35_RS22935 PF00375 Sodium:dicarboxylate symporter family KD35_RS22970 PF04101 Glycosyltransferase family 28 C-terminal domain KD35_RS22970 PF03033 Glycosyltransferase family 28 N-terminal domain KD35_RS22975 PF00809 Pterin binding enzyme KD35_RS22975 PF02310 B12 binding domain KD35_RS22975 PF02574 Homocysteine S-methyltransferase KD35_RS22975 PF02607 B12 binding domain KD35_RS22975 PF02965 Vitamin B12 dependent methionine synthase, activation domain KD35_RS22980 PF02574 Homocysteine S-methyltransferase KD35_RS22980 PF02219 Methylenetetrahydrofolate reductase KD35_RS22990 PF01053 Cys/Met metabolism PLP-dependent enzyme KD35_RS22995 PF01053 Cys/Met metabolism PLP-dependent enzyme KD35_RS23010 PF01022 Bacterial regulatory protein, arsR family KD35_RS23020 PF00753 Metallo-beta-lactamase superfamily KD35_RS23025 PF10958 Protein of unknown function (DUF2759) KD35_RS23030 PF00480 ROK family KD35_RS23035 PF06014 Bacterial protein of unknown function (DUF910) KD35_RS23040 PF01812 5-formyltetrahydrofolate cyclo-ligase family KD35_RS23045 PF00471 Ribosomal protein L33 KD35_RS23050 PF00483 Nucleotidyl transferase KD35_RS23055 PF01895 PhoU domain KD35_RS23060 PF00005 ABC transporter KD35_RS23065 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS23070 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS23075 PF12849 PBP superfamily domain KD35_RS23080 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS23080 PF00905 Penicillin binding protein transpeptidase domain KD35_RS23085 PF07690 Major Facilitator Superfamily KD35_RS23090 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KD35_RS23090 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KD35_RS23110 PF04551 GcpE protein KD35_RS23115 PF01475 Ferric uptake regulator family KD35_RS23120 PF00950 ABC 3 transport family KD35_RS23125 PF00005 ABC transporter KD35_RS23130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS23130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS23135 PF11116 Protein of unknown function (DUF2624) KD35_RS23140 PF01261 Xylose isomerase-like TIM barrel KD35_RS23145 PF00271 Helicase conserved C-terminal domain KD35_RS23145 PF00270 DEAD/DEAH box helicase KD35_RS23155 PF02401 LytB protein KD35_RS23160 PF01784 NIF3 (NGG1p interacting factor 3) KD35_RS23165 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KD35_RS23170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KD35_RS23175 PF04545 Sigma-70, region 4 KD35_RS23175 PF04539 Sigma-70 region 3 KD35_RS23175 PF03979 Sigma-70 factor, region 1.1 KD35_RS23175 PF04542 Sigma-70 region 2 KD35_RS23175 PF00140 Sigma-70 factor, region 1.2 KD35_RS23180 PF01807 CHC2 zinc finger KD35_RS23180 PF08275 DNA primase catalytic core, N-terminal domain KD35_RS23180 PF10410 DnaB-helicase binding domain of primase KD35_RS23195 PF03618 Kinase/pyrophosphorylase KD35_RS23200 PF00571 CBS domain KD35_RS23200 PF08279 HTH domain KD35_RS23205 PF11967 Recombination protein O N terminal KD35_RS23205 PF02565 Recombination protein O C terminal KD35_RS23215 PF01926 50S ribosome-binding GTPase KD35_RS23215 PF07650 KH domain KD35_RS23220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KD35_RS23225 PF01219 Prokaryotic diacylglycerol kinase KD35_RS23230 PF02130 Uncharacterized protein family UPF0054 KD35_RS23235 PF07698 7TM receptor with intracellular HD hydrolase KD35_RS23235 PF07697 7TM-HD extracellular KD35_RS23235 PF01966 HD domain KD35_RS23240 PF02562 PhoH-like protein KD35_RS23245 PF06898 Putative stage IV sporulation protein YqfD KD35_RS23255 PF07873 YabP family KD35_RS23260 PF09424 Yqey-like protein KD35_RS23265 PF01165 Ribosomal protein S21 KD35_RS23270 PF04055 Radical SAM superfamily KD35_RS23270 PF01938 TRAM domain KD35_RS23270 PF00919 Uncharacterized protein family UPF0004 KD35_RS23275 PF04452 RNA methyltransferase KD35_RS23285 PF00684 DnaJ central domain KD35_RS23285 PF01556 DnaJ C terminal domain KD35_RS23285 PF00226 DnaJ domain KD35_RS23290 PF00012 Hsp70 protein KD35_RS23295 PF01025 GrpE KD35_RS23300 PF01628 HrcA protein C terminal domain KD35_RS23305 PF06969 HemN C-terminal domain KD35_RS23305 PF04055 Radical SAM superfamily KD35_RS23310 PF01638 HxlR-like helix-turn-helix KD35_RS23315 PF06421 GTP-binding protein LepA C-terminus KD35_RS23315 PF03144 Elongation factor Tu domain 2 KD35_RS23315 PF00679 Elongation factor G C-terminus KD35_RS23315 PF00009 Elongation factor Tu GTP binding domain KD35_RS23325 PF03418 Germination protease KD35_RS23330 PF01649 Ribosomal protein S20 KD35_RS23335 PF06144 DNA polymerase III, delta subunit KD35_RS23340 PF14141 YqzM-like protein KD35_RS23345 PF13567 Domain of unknown function (DUF4131) KD35_RS23345 PF00753 Metallo-beta-lactamase superfamily KD35_RS23345 PF03772 Competence protein KD35_RS23350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KD35_RS23355 PF10531 SLBB domain KD35_RS23360 PF14748 Pyrroline-5-carboxylate reductase dimerisation KD35_RS23360 PF03807 NADP oxidoreductase coenzyme F420-dependent KD35_RS23365 PF13649 Methyltransferase domain KD35_RS23375 PF01966 HD domain KD35_RS23380 PF01467 Cytidylyltransferase-like KD35_RS23385 PF01985 CRS1 / YhbY (CRM) domain KD35_RS23390 PF08501 Shikimate dehydrogenase substrate binding domain KD35_RS23390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KD35_RS23390 PF01488 Shikimate / quinate 5-dehydrogenase KD35_RS23395 PF01926 50S ribosome-binding GTPase KD35_RS23410 PF02666 Phosphatidylserine decarboxylase KD35_RS23415 PF04545 Sigma-70, region 4 KD35_RS23415 PF04542 Sigma-70 region 2 KD35_RS23425 PF16244 Domain of unknown function (DUF4901) KD35_RS23430 PF00471 Ribosomal protein L33 KD35_RS23435 PF00881 Nitroreductase family KD35_RS23440 PF04607 Region found in RelA / SpoT proteins KD35_RS23450 PF00245 Alkaline phosphatase KD35_RS23460 PF08386 TAP-like protein KD35_RS23460 PF00561 alpha/beta hydrolase fold KD35_RS23495 PF13860 FlgD Ig-like domain KD35_RS23495 PF02225 PA domain KD35_RS23495 PF00082 Subtilase family KD35_RS23495 PF05922 Peptidase inhibitor I9 KD35_RS23500 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KD35_RS23510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS23515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS23520 PF07681 DoxX KD35_RS23550 PF00005 ABC transporter KD35_RS23555 PF01032 FecCD transport family KD35_RS23560 PF01497 Periplasmic binding protein KD35_RS23565 PF14143 YrhC-like protein KD35_RS23570 PF00171 Aldehyde dehydrogenase family KD35_RS23570 PF00465 Iron-containing alcohol dehydrogenase KD35_RS23575 PF01053 Cys/Met metabolism PLP-dependent enzyme KD35_RS23580 PF00291 Pyridoxal-phosphate dependent enzyme KD35_RS23585 PF01048 Phosphorylase superfamily KD35_RS23590 PF08241 Methyltransferase domain KD35_RS23605 PF03717 Penicillin-binding Protein dimerisation domain KD35_RS23605 PF00905 Penicillin binding protein transpeptidase domain KD35_RS23610 PF01272 Transcription elongation factor, GreA/GreB, C-term KD35_RS23610 PF03449 Transcription elongation factor, N-terminal KD35_RS23615 PF00485 Phosphoribulokinase / Uridine kinase family KD35_RS23620 PF01136 Peptidase family U32 KD35_RS23620 PF16325 Peptidase family U32 C-terminal domain KD35_RS23625 PF01136 Peptidase family U32 KD35_RS23630 PF01596 O-methyltransferase KD35_RS23635 PF02618 YceG-like family KD35_RS23640 PF06949 Protein of unknown function (DUF1292) KD35_RS23645 PF03652 Holliday junction resolvase KD35_RS23650 PF06135 IreB regulatory phosphoprotein KD35_RS23655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KD35_RS23655 PF01411 tRNA synthetases class II (A) KD35_RS23655 PF02272 DHHA1 domain KD35_RS23665 PF01594 AI-2E family transporter KD35_RS23685 PF14490 Helix-hairpin-helix containing domain KD35_RS23685 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KD35_RS23685 PF13538 UvrD-like helicase C-terminal domain KD35_RS23700 PF00266 Aminotransferase class-V KD35_RS23705 PF02082 Transcriptional regulator KD35_RS23710 PF05496 Holliday junction DNA helicase RuvB P-loop domain KD35_RS23710 PF12002 MgsA AAA+ ATPase C terminal KD35_RS23710 PF16193 AAA C-terminal domain KD35_RS23720 PF00899 ThiF family KD35_RS23725 PF01336 OB-fold nucleic acid binding domain KD35_RS23725 PF00152 tRNA synthetases class II (D, K and N) KD35_RS23725 PF02938 GAD domain KD35_RS23730 PF03129 Anticodon binding domain KD35_RS23730 PF13393 Histidyl-tRNA synthetase KD35_RS23740 PF02580 D-Tyr-tRNA(Tyr) deacylase KD35_RS23745 PF04607 Region found in RelA / SpoT proteins KD35_RS23745 PF13291 ACT domain KD35_RS23745 PF02824 TGS domain KD35_RS23750 PF00156 Phosphoribosyl transferase domain KD35_RS23755 PF17768 RecJ OB domain KD35_RS23755 PF02272 DHHA1 domain KD35_RS23755 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KD35_RS23755 PF01368 DHH family KD35_RS23760 PF16916 Dimerisation domain of Zinc Transporter KD35_RS23760 PF01545 Cation efflux family KD35_RS23765 PF02355 Protein export membrane protein KD35_RS23765 PF07549 SecD/SecF GG Motif KD35_RS23770 PF13797 Post-transcriptional regulator KD35_RS23775 PF01943 Polysaccharide biosynthesis protein KD35_RS23775 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS23780 PF04239 Protein of unknown function (DUF421) KD35_RS23790 PF02699 Preprotein translocase subunit KD35_RS23795 PF01702 Queuine tRNA-ribosyltransferase KD35_RS23800 PF02547 Queuosine biosynthesis protein KD35_RS23805 PF11146 Protein of unknown function (DUF2905) KD35_RS23810 PF05496 Holliday junction DNA helicase RuvB P-loop domain KD35_RS23810 PF17864 RuvB AAA lid domain KD35_RS23810 PF05491 RuvB C-terminal winged helix domain KD35_RS23815 PF01330 RuvA N terminal domain KD35_RS23815 PF07499 RuvA, C-terminal domain KD35_RS23820 PF01497 Periplasmic binding protein KD35_RS23830 PF00892 EamA-like transporter family KD35_RS23835 PF00892 EamA-like transporter family KD35_RS23840 PF01022 Bacterial regulatory protein, arsR family KD35_RS23855 PF01476 LysM domain KD35_RS23860 PF02445 Quinolinate synthetase A protein KD35_RS23865 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KD35_RS23865 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KD35_RS23870 PF02910 Fumarate reductase flavoprotein C-term KD35_RS23870 PF00890 FAD binding domain KD35_RS23875 PF00266 Aminotransferase class-V KD35_RS23880 PF02829 3H domain KD35_RS23880 PF08279 HTH domain KD35_RS23885 PF03473 MOSC domain KD35_RS23885 PF03475 3-alpha domain KD35_RS23890 PF01842 ACT domain KD35_RS23890 PF00800 Prephenate dehydratase KD35_RS23895 PF02687 FtsX-like permease family KD35_RS23900 PF02687 FtsX-like permease family KD35_RS23905 PF00005 ABC transporter KD35_RS23910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS23920 PF00486 Transcriptional regulatory protein, C terminal KD35_RS23920 PF00072 Response regulator receiver domain KD35_RS23925 PF01018 GTP1/OBG KD35_RS23925 PF01926 50S ribosome-binding GTPase KD35_RS23925 PF09269 Domain of unknown function (DUF1967) KD35_RS23930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KD35_RS23930 PF14682 Sporulation initiation phospho-transferase B, C-terminal KD35_RS23935 PF01016 Ribosomal L27 protein KD35_RS23940 PF04327 Cysteine protease Prp KD35_RS23945 PF00829 Ribosomal prokaryotic L21 protein KD35_RS23950 PF00575 S1 RNA binding domain KD35_RS23950 PF10150 Ribonuclease E/G family KD35_RS23955 PF02163 Peptidase family M50 KD35_RS23960 PF01551 Peptidase family M23 KD35_RS23965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KD35_RS23970 PF03775 Septum formation inhibitor MinC, C-terminal domain KD35_RS23980 PF04085 rod shape-determining protein MreC KD35_RS23990 PF04002 RadC-like JAB domain KD35_RS23995 PF02545 Maf-like protein KD35_RS24005 PF02875 Mur ligase family, glutamate ligase domain KD35_RS24005 PF08245 Mur ligase middle domain KD35_RS24010 PF10458 Valyl tRNA synthetase tRNA binding arm KD35_RS24010 PF08264 Anticodon-binding domain of tRNA KD35_RS24010 PF00133 tRNA synthetases class I (I, L, M and V) KD35_RS24020 PF01476 LysM domain KD35_RS24025 PF00202 Aminotransferase class-III KD35_RS24030 PF00490 Delta-aminolevulinic acid dehydratase KD35_RS24035 PF02602 Uroporphyrinogen-III synthase HemD KD35_RS24040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KD35_RS24040 PF03900 Porphobilinogen deaminase, C-terminal domain KD35_RS24045 PF01578 Cytochrome C assembly protein KD35_RS24050 PF01488 Shikimate / quinate 5-dehydrogenase KD35_RS24050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KD35_RS24050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KD35_RS24055 PF01047 MarR family KD35_RS24060 PF02566 OsmC-like protein KD35_RS24065 PF01926 50S ribosome-binding GTPase KD35_RS24070 PF02190 ATP-dependent protease La (LON) substrate-binding domain KD35_RS24070 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS24070 PF05362 Lon protease (S16) C-terminal proteolytic domain KD35_RS24075 PF05362 Lon protease (S16) C-terminal proteolytic domain KD35_RS24075 PF00004 ATPase family associated with various cellular activities (AAA) KD35_RS24080 PF06689 ClpX C4-type zinc finger KD35_RS24080 PF10431 C-terminal, D2-small domain, of ClpB protein KD35_RS24080 PF07724 AAA domain (Cdc48 subfamily) KD35_RS24085 PF05697 Bacterial trigger factor protein (TF) KD35_RS24085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KD35_RS24085 PF05698 Bacterial trigger factor protein (TF) C-terminus KD35_RS24105 PF08000 Bacterial PH domain KD35_RS24105 PF11724 YvbH-like oligomerisation region KD35_RS24125 PF12850 Calcineurin-like phosphoesterase superfamily domain KD35_RS24130 PF01725 Ham1 family KD35_RS24135 PF03725 3' exoribonuclease family, domain 2 KD35_RS24135 PF01138 3' exoribonuclease family, domain 1 KD35_RS24140 PF10646 Sporulation and spore germination KD35_RS24145 PF01177 Asp/Glu/Hydantoin racemase KD35_RS24150 PF07690 Major Facilitator Superfamily KD35_RS24160 PF00440 Bacterial regulatory proteins, tetR family KD35_RS24175 PF00196 Bacterial regulatory proteins, luxR family KD35_RS24180 PF00860 Permease family KD35_RS24190 PF07969 Amidohydrolase family KD35_RS24195 PF07969 Amidohydrolase family KD35_RS24200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KD35_RS24205 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS24205 PF12911 N-terminal TM domain of oligopeptide transport permease C KD35_RS24210 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS24215 PF00005 ABC transporter KD35_RS24215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS24220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KD35_RS24220 PF00005 ABC transporter KD35_RS24225 PF07694 5TMR of 5TMR-LYT KD35_RS24225 PF06580 Histidine kinase KD35_RS24225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS24230 PF00072 Response regulator receiver domain KD35_RS24230 PF04397 LytTr DNA-binding domain KD35_RS24245 PF04024 PspC domain KD35_RS24250 PF07883 Cupin domain KD35_RS24250 PF01381 Helix-turn-helix KD35_RS24255 PF13536 Putative multidrug resistance efflux transporter KD35_RS24260 PF00230 Major intrinsic protein KD35_RS24265 PF02082 Transcriptional regulator KD35_RS24275 PF13732 Domain of unknown function (DUF4162) KD35_RS24275 PF00005 ABC transporter KD35_RS24280 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KD35_RS24290 PF01618 MotA/TolQ/ExbB proton channel family KD35_RS24295 PF02557 D-alanyl-D-alanine carboxypeptidase KD35_RS24300 PF03061 Thioesterase superfamily KD35_RS24305 PF13085 2Fe-2S iron-sulfur cluster binding domain KD35_RS24305 PF13183 4Fe-4S dicluster domain KD35_RS24310 PF00890 FAD binding domain KD35_RS24310 PF02910 Fumarate reductase flavoprotein C-term KD35_RS24315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KD35_RS24320 PF10702 Protein of unknown function (DUF2507) KD35_RS24325 PF08459 UvrC Helix-hairpin-helix N-terminal KD35_RS24325 PF02151 UvrB/uvrC motif KD35_RS24325 PF01541 GIY-YIG catalytic domain KD35_RS24330 PF00085 Thioredoxin KD35_RS24335 PF00766 Electron transfer flavoprotein FAD-binding domain KD35_RS24335 PF01012 Electron transfer flavoprotein domain KD35_RS24340 PF01012 Electron transfer flavoprotein domain KD35_RS24345 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS24350 PF00440 Bacterial regulatory proteins, tetR family KD35_RS24350 PF08359 YsiA-like protein, C-terminal region KD35_RS24355 PF00501 AMP-binding enzyme KD35_RS24355 PF13193 AMP-binding enzyme C-terminal domain KD35_RS24365 PF01497 Periplasmic binding protein KD35_RS24370 PF01032 FecCD transport family KD35_RS24375 PF05163 DinB family KD35_RS24405 PF00005 ABC transporter KD35_RS24410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS24410 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS24415 PF00486 Transcriptional regulatory protein, C terminal KD35_RS24415 PF00072 Response regulator receiver domain KD35_RS24425 PF09962 Uncharacterized conserved protein (DUF2196) KD35_RS24430 PF10672 S-adenosylmethionine-dependent methyltransferase KD35_RS24430 PF17785 PUA-like domain KD35_RS24440 PF03992 Antibiotic biosynthesis monooxygenase KD35_RS24445 PF04203 Sortase domain KD35_RS24450 PF00005 ABC transporter KD35_RS24455 PF01032 FecCD transport family KD35_RS24460 PF01497 Periplasmic binding protein KD35_RS24465 PF05031 Iron Transport-associated domain KD35_RS24475 PF05031 Iron Transport-associated domain KD35_RS24480 PF05525 Branched-chain amino acid transport protein KD35_RS24485 PF00849 RNA pseudouridylate synthase KD35_RS24485 PF01479 S4 domain KD35_RS24495 PF00488 MutS domain V KD35_RS24495 PF01713 Smr domain KD35_RS24500 PF14716 Helix-hairpin-helix domain KD35_RS24500 PF14791 DNA polymerase beta thumb KD35_RS24500 PF02811 PHP domain KD35_RS24505 PF02674 Colicin V production protein KD35_RS24510 PF05164 Cell division protein ZapA KD35_RS24515 PF11858 Domain of unknown function (DUF3378) KD35_RS24515 PF01351 Ribonuclease HII KD35_RS24535 PF00152 tRNA synthetases class II (D, K and N) KD35_RS24535 PF01336 OB-fold nucleic acid binding domain KD35_RS24540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KD35_RS24540 PF03147 Ferredoxin-fold anticodon binding domain KD35_RS24540 PF03484 tRNA synthetase B5 domain KD35_RS24540 PF03483 B3/4 domain KD35_RS24540 PF01588 Putative tRNA binding domain KD35_RS24545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KD35_RS24545 PF01409 tRNA synthetases class II core domain (F) KD35_RS24550 PF00588 SpoU rRNA Methylase family KD35_RS24550 PF08032 RNA 2'-O ribose methyltransferase substrate binding KD35_RS24555 PF14098 Small, acid-soluble spore protein I KD35_RS24560 PF01966 HD domain KD35_RS24585 PF07690 Major Facilitator Superfamily KD35_RS24595 PF16859 Tetracyclin repressor-like, C-terminal domain KD35_RS24595 PF00440 Bacterial regulatory proteins, tetR family KD35_RS24600 PF05343 M42 glutamyl aminopeptidase KD35_RS24610 PF00453 Ribosomal protein L20 KD35_RS24615 PF01632 Ribosomal protein L35 KD35_RS24620 PF05198 Translation initiation factor IF-3, N-terminal domain KD35_RS24620 PF00707 Translation initiation factor IF-3, C-terminal domain KD35_RS24625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KD35_RS24625 PF02824 TGS domain KD35_RS24625 PF03129 Anticodon binding domain KD35_RS24625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS24630 PF08812 YtxC-like family KD35_RS24635 PF01695 IstB-like ATP binding protein KD35_RS24635 PF07319 Primosomal protein DnaI N-terminus KD35_RS24640 PF07261 Replication initiation and membrane attachment KD35_RS24645 PF03477 ATP cone domain KD35_RS24650 PF02675 S-adenosylmethionine decarboxylase KD35_RS24655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KD35_RS24655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KD35_RS24660 PF01121 Dephospho-CoA kinase KD35_RS24665 PF02659 Putative manganese efflux pump KD35_RS24670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KD35_RS24670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KD35_RS24670 PF06827 Zinc finger found in FPG and IleRS KD35_RS24675 PF00476 DNA polymerase family A KD35_RS24675 PF01367 5'-3' exonuclease, C-terminal SAM fold KD35_RS24675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KD35_RS24680 PF00989 PAS fold KD35_RS24680 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS24680 PF16736 Single Cache-like KD35_RS24680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS24685 PF00486 Transcriptional regulatory protein, C terminal KD35_RS24685 PF00072 Response regulator receiver domain KD35_RS24700 PF00056 lactate/malate dehydrogenase, NAD binding domain KD35_RS24700 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KD35_RS24705 PF00180 Isocitrate/isopropylmalate dehydrogenase KD35_RS24710 PF00285 Citrate synthase, C-terminal domain KD35_RS24720 PF04284 Protein of unknown function (DUF441) KD35_RS24725 PF01594 AI-2E family transporter KD35_RS24730 PF04186 FxsA cytoplasmic membrane protein KD35_RS24735 PF00224 Pyruvate kinase, barrel domain KD35_RS24735 PF00391 PEP-utilising enzyme, mobile domain KD35_RS24735 PF02887 Pyruvate kinase, alpha/beta domain KD35_RS24740 PF00365 Phosphofructokinase KD35_RS24745 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KD35_RS24750 PF17848 Acetyl-coA carboxylase zinc finger domain KD35_RS24750 PF01039 Carboxyl transferase domain KD35_RS24755 PF00392 Bacterial regulatory proteins, gntR family KD35_RS24760 PF00390 Malic enzyme, N-terminal domain KD35_RS24760 PF03949 Malic enzyme, NAD binding domain KD35_RS24765 PF01336 OB-fold nucleic acid binding domain KD35_RS24765 PF07733 Bacterial DNA polymerase III alpha NTPase domain KD35_RS24765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KD35_RS24765 PF14579 Helix-hairpin-helix motif KD35_RS24765 PF02811 PHP domain KD35_RS24770 PF14034 Sporulation protein YtrH KD35_RS24780 PF02272 DHHA1 domain KD35_RS24780 PF01368 DHH family KD35_RS24785 PF14007 YtpI-like protein KD35_RS24800 PF03061 Thioesterase superfamily KD35_RS24800 PF07085 DRTGG domain KD35_RS24800 PF00571 CBS domain KD35_RS24800 PF00392 Bacterial regulatory proteins, gntR family KD35_RS24815 PF00557 Metallopeptidase family M24 KD35_RS24815 PF01321 Creatinase/Prolidase N-terminal domain KD35_RS24820 PF11518 Protein of unknown function (DUF3221) KD35_RS24850 PF12746 GNAT acetyltransferase KD35_RS24855 PF07883 Cupin domain KD35_RS24865 PF01381 Helix-turn-helix KD35_RS24875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KD35_RS24875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KD35_RS24885 PF00582 Universal stress protein family KD35_RS24905 PF14698 Argininosuccinate lyase C-terminal KD35_RS24905 PF00206 Lyase KD35_RS24910 PF00764 Arginosuccinate synthase KD35_RS24925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS24925 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS24930 PF12787 EcsC protein family KD35_RS24945 PF00871 Acetokinase family KD35_RS24950 PF02384 N-6 DNA Methylase KD35_RS24955 PF08534 Redoxin KD35_RS24960 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KD35_RS24970 PF01513 ATP-NAD kinase KD35_RS24975 PF07969 Amidohydrolase family KD35_RS24985 PF00501 AMP-binding enzyme KD35_RS24985 PF13193 AMP-binding enzyme C-terminal domain KD35_RS24990 PF00269 Small, acid-soluble spore proteins, alpha/beta type KD35_RS24995 PF02926 THUMP domain KD35_RS24995 PF02568 Thiamine biosynthesis protein (ThiI) KD35_RS25000 PF00266 Aminotransferase class-V KD35_RS25005 PF06160 Septation ring formation regulator, EzrA KD35_RS25010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS25010 PF03466 LysR substrate binding domain KD35_RS25015 PF00892 EamA-like transporter family KD35_RS25025 PF13185 GAF domain KD35_RS25030 PF01053 Cys/Met metabolism PLP-dependent enzyme KD35_RS25035 PF00163 Ribosomal protein S4/S9 N-terminal domain KD35_RS25035 PF01479 S4 domain KD35_RS25050 PF01479 S4 domain KD35_RS25050 PF00579 tRNA synthetases class I (W and Y) KD35_RS25060 PF08281 Sigma-70, region 4 KD35_RS25060 PF04542 Sigma-70 region 2 KD35_RS25070 PF00501 AMP-binding enzyme KD35_RS25070 PF13193 AMP-binding enzyme C-terminal domain KD35_RS25075 PF00583 Acetyltransferase (GNAT) family KD35_RS25080 PF00571 CBS domain KD35_RS25085 PF00850 Histone deacetylase domain KD35_RS25095 PF00486 Transcriptional regulatory protein, C terminal KD35_RS25095 PF00072 Response regulator receiver domain KD35_RS25100 PF13426 PAS domain KD35_RS25100 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS25100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS25100 PF00672 HAMP domain KD35_RS25105 PF12796 Ankyrin repeats (3 copies) KD35_RS25110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KD35_RS25115 PF01741 Large-conductance mechanosensitive channel, MscL KD35_RS25140 PF00356 Bacterial regulatory proteins, lacI family KD35_RS25150 PF07537 CamS sex pheromone cAM373 precursor KD35_RS25155 PF11009 Protein of unknown function (DUF2847) KD35_RS25165 PF02073 Thermophilic metalloprotease (M29) KD35_RS25185 PF13302 Acetyltransferase (GNAT) domain KD35_RS25190 PF02875 Mur ligase family, glutamate ligase domain KD35_RS25190 PF08245 Mur ligase middle domain KD35_RS25190 PF01225 Mur ligase family, catalytic domain KD35_RS25200 PF01580 FtsK/SpoIIIE family KD35_RS25200 PF09397 Ftsk gamma domain KD35_RS25200 PF17854 FtsK alpha domain KD35_RS25210 PF01588 Putative tRNA binding domain KD35_RS25210 PF14794 Domain of unknown function (DUF4479) KD35_RS25215 PF07285 Protein of unknown function (DUF1444) KD35_RS25220 PF00085 Thioredoxin KD35_RS25225 PF01931 Protein of unknown function DUF84 KD35_RS25230 PF05343 M42 glutamyl aminopeptidase KD35_RS25240 PF00753 Metallo-beta-lactamase superfamily KD35_RS25245 PF02390 Putative methyltransferase KD35_RS25250 PF14165 YtzH-like protein KD35_RS25255 PF01636 Phosphotransferase enzyme family KD35_RS25260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KD35_RS25260 PF00128 Alpha amylase, catalytic domain KD35_RS25260 PF17999 Pullulanase N1-terminal domain KD35_RS25270 PF02834 LigT like Phosphoesterase KD35_RS25275 PF01546 Peptidase family M20/M25/M40 KD35_RS25280 PF01546 Peptidase family M20/M25/M40 KD35_RS25285 PF08220 DeoR-like helix-turn-helix domain KD35_RS25290 PF00849 RNA pseudouridylate synthase KD35_RS25290 PF01479 S4 domain KD35_RS25295 PF01943 Polysaccharide biosynthesis protein KD35_RS25295 PF14667 Polysaccharide biosynthesis C-terminal domain KD35_RS25305 PF07690 Major Facilitator Superfamily KD35_RS25310 PF01022 Bacterial regulatory protein, arsR family KD35_RS25315 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KD35_RS25325 PF10957 Sporulation protein Cse60 KD35_RS25335 PF02559 CarD-like/TRCF domain KD35_RS25345 PF06800 Sugar transport protein KD35_RS25360 PF02391 MoaE protein KD35_RS25365 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KD35_RS25370 PF03453 MoeA N-terminal region (domain I and II) KD35_RS25370 PF03454 MoeA C-terminal region (domain IV) KD35_RS25370 PF00994 Probable molybdopterin binding domain KD35_RS25375 PF01967 MoaC family KD35_RS25380 PF00899 ThiF family KD35_RS25405 PF00581 Rhodanese-like domain KD35_RS25415 PF00561 alpha/beta hydrolase fold KD35_RS25420 PF03323 Bacillus/Clostridium GerA spore germination protein KD35_RS25425 PF03845 Spore germination protein KD35_RS25455 PF13603 Leucyl-tRNA synthetase, Domain 2 KD35_RS25455 PF00133 tRNA synthetases class I (I, L, M and V) KD35_RS25455 PF08264 Anticodon-binding domain of tRNA KD35_RS25455 PF09334 tRNA synthetases class I (M) KD35_RS25460 PF07690 Major Facilitator Superfamily KD35_RS25465 PF00999 Sodium/hydrogen exchanger family KD35_RS25470 PF02080 TrkA-C domain KD35_RS25475 PF00589 Phage integrase family KD35_RS25485 PF00005 ABC transporter KD35_RS25490 PF07786 Protein of unknown function (DUF1624) KD35_RS25490 PF04235 Protein of unknown function (DUF418) KD35_RS25500 PF10732 Protein of unknown function (DUF2524) KD35_RS25505 PF16199 Radical_SAM C-terminal domain KD35_RS25505 PF04055 Radical SAM superfamily KD35_RS25510 PF06962 Putative rRNA methylase KD35_RS25515 PF13732 Domain of unknown function (DUF4162) KD35_RS25515 PF00005 ABC transporter KD35_RS25525 PF01177 Asp/Glu/Hydantoin racemase KD35_RS25540 PF10776 Protein of unknown function (DUF2600) KD35_RS25545 PF12146 Serine aminopeptidase, S33 KD35_RS25550 PF00132 Bacterial transferase hexapeptide (six repeats) KD35_RS25555 PF01569 PAP2 superfamily KD35_RS25560 PF13439 Glycosyltransferase Family 4 KD35_RS25560 PF00534 Glycosyl transferases group 1 KD35_RS25565 PF12804 MobA-like NTP transferase domain KD35_RS25570 PF00994 Probable molybdopterin binding domain KD35_RS25585 PF02773 S-adenosylmethionine synthetase, C-terminal domain KD35_RS25585 PF02772 S-adenosylmethionine synthetase, central domain KD35_RS25585 PF00438 S-adenosylmethionine synthetase, N-terminal domain KD35_RS25590 PF01293 Phosphoenolpyruvate carboxykinase KD35_RS25625 PF01784 NIF3 (NGG1p interacting factor 3) KD35_RS25630 PF13188 PAS domain KD35_RS25630 PF13426 PAS domain KD35_RS25630 PF00989 PAS fold KD35_RS25630 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS25630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS25635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS25635 PF08447 PAS fold KD35_RS25635 PF00989 PAS fold KD35_RS25635 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS25640 PF08386 TAP-like protein KD35_RS25640 PF00561 alpha/beta hydrolase fold KD35_RS25665 PF00005 ABC transporter KD35_RS25670 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS25695 PF00293 NUDIX domain KD35_RS25715 PF02664 S-Ribosylhomocysteinase (LuxS) KD35_RS25720 PF01809 Putative membrane protein insertion efficiency factor KD35_RS25725 PF00484 Carbonic anhydrase KD35_RS25730 PF01654 Cytochrome bd terminal oxidase subunit I KD35_RS25735 PF02322 Cytochrome bd terminal oxidase subunit II KD35_RS25740 PF10676 Spore germination protein gerPA/gerPF KD35_RS25755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS25755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS25780 PF04012 PspA/IM30 family KD35_RS25800 PF07670 Nucleoside recognition KD35_RS25800 PF02421 Ferrous iron transport protein B KD35_RS25800 PF07664 Ferrous iron transport protein B C terminus KD35_RS25800 PF17910 FeoB cytosolic helical domain KD35_RS25810 PF09515 Thiamine transporter protein (Thia_YuaJ) KD35_RS25815 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS25815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS25815 PF00672 HAMP domain KD35_RS25820 PF00486 Transcriptional regulatory protein, C terminal KD35_RS25820 PF00072 Response regulator receiver domain KD35_RS25845 PF00156 Phosphoribosyl transferase domain KD35_RS25850 PF00781 Diacylglycerol kinase catalytic domain KD35_RS25870 PF00248 Aldo/keto reductase family KD35_RS25885 PF09335 SNARE associated Golgi protein KD35_RS25890 PF00398 Ribosomal RNA adenine dimethylase KD35_RS25895 PF02687 FtsX-like permease family KD35_RS25900 PF00005 ABC transporter KD35_RS25905 PF06445 GyrI-like small molecule binding domain KD35_RS25905 PF12833 Helix-turn-helix domain KD35_RS25910 PF00486 Transcriptional regulatory protein, C terminal KD35_RS25910 PF00072 Response regulator receiver domain KD35_RS25920 PF02687 FtsX-like permease family KD35_RS25930 PF02687 FtsX-like permease family KD35_RS25935 PF02687 FtsX-like permease family KD35_RS25940 PF00005 ABC transporter KD35_RS25955 PF02447 GntP family permease KD35_RS25960 PF00392 Bacterial regulatory proteins, gntR family KD35_RS25960 PF07702 UTRA domain KD35_RS25970 PF07071 KDGP aldolase KD35_RS25975 PF03841 L-seryl-tRNA selenium transferase KD35_RS25980 PF01979 Amidohydrolase family KD35_RS25995 PF02557 D-alanyl-D-alanine carboxypeptidase KD35_RS26000 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS26000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS26005 PF00072 Response regulator receiver domain KD35_RS26005 PF00486 Transcriptional regulatory protein, C terminal KD35_RS26010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KD35_RS26010 PF13378 Enolase C-terminal domain-like KD35_RS26015 PF00501 AMP-binding enzyme KD35_RS26015 PF13193 AMP-binding enzyme C-terminal domain KD35_RS26020 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS26025 PF00561 alpha/beta hydrolase fold KD35_RS26030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KD35_RS26030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KD35_RS26030 PF16582 Middle domain of thiamine pyrophosphate KD35_RS26035 PF00425 chorismate binding enzyme KD35_RS26040 PF01040 UbiA prenyltransferase family KD35_RS26045 PF01258 Prokaryotic dksA/traR C4-type zinc finger KD35_RS26050 PF00313 'Cold-shock' DNA-binding domain KD35_RS26070 PF00343 Carbohydrate phosphorylase KD35_RS26075 PF00534 Glycosyl transferases group 1 KD35_RS26075 PF08323 Starch synthase catalytic domain KD35_RS26080 PF00483 Nucleotidyl transferase KD35_RS26085 PF00483 Nucleotidyl transferase KD35_RS26090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KD35_RS26090 PF02806 Alpha amylase, C-terminal all-beta domain KD35_RS26090 PF00128 Alpha amylase, catalytic domain KD35_RS26095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KD35_RS26095 PF00056 lactate/malate dehydrogenase, NAD binding domain KD35_RS26190 PF05697 Bacterial trigger factor protein (TF) KD35_RS26190 PF05698 Bacterial trigger factor protein (TF) C-terminus KD35_RS26225 PF02308 MgtC family KD35_RS26230 PF02254 TrkA-N domain KD35_RS26230 PF07885 Ion channel KD35_RS26235 PF08868 YugN-like family KD35_RS26240 PF00342 Phosphoglucose isomerase KD35_RS26250 PF04070 Domain of unknown function (DUF378) KD35_RS26255 PF00575 S1 RNA binding domain KD35_RS26260 PF00155 Aminotransferase class I and II KD35_RS26265 PF01037 Lrp/AsnC ligand binding domain KD35_RS26270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KD35_RS26270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KD35_RS26275 PF08386 TAP-like protein KD35_RS26275 PF00561 alpha/beta hydrolase fold KD35_RS26285 PF00155 Aminotransferase class I and II KD35_RS26300 PF08810 Kinase associated protein B KD35_RS26305 PF00929 Exonuclease KD35_RS26310 PF03600 Citrate transporter KD35_RS26325 PF03129 Anticodon binding domain KD35_RS26325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KD35_RS26330 PF03061 Thioesterase superfamily KD35_RS26340 PF02632 BioY family KD35_RS26350 PF00483 Nucleotidyl transferase KD35_RS26355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KD35_RS26355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KD35_RS26355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KD35_RS26355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KD35_RS26360 PF02457 DisA bacterial checkpoint controller nucleotide-binding KD35_RS26360 PF10372 Bacterial membrane-spanning protein N-terminus KD35_RS26365 PF00883 Cytosol aminopeptidase family, catalytic domain KD35_RS26365 PF02789 Cytosol aminopeptidase family, N-terminal domain KD35_RS26370 PF06725 3D domain KD35_RS26380 PF00293 NUDIX domain KD35_RS26380 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS26385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS26390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS26400 PF06445 GyrI-like small molecule binding domain KD35_RS26415 PF04463 Protein of unknown function (DUF523) KD35_RS26435 PF01521 Iron-sulphur cluster biosynthesis KD35_RS26440 PF01678 Diaminopimelate epimerase KD35_RS26445 PF07293 Protein of unknown function (DUF1450) KD35_RS26450 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS26460 PF09383 NIL domain KD35_RS26460 PF00005 ABC transporter KD35_RS26465 PF03649 Uncharacterised protein family (UPF0014) KD35_RS26470 PF03831 PhnA domain KD35_RS26470 PF08274 PhnA Zinc-Ribbon KD35_RS26505 PF13427 Domain of unknown function (DUF4111) KD35_RS26505 PF01909 Nucleotidyltransferase domain KD35_RS26510 PF07315 Protein of unknown function (DUF1462) KD35_RS26515 PF01106 NifU-like domain KD35_RS26530 PF04608 Phosphatidylglycerophosphatase A KD35_RS26545 PF02525 Flavodoxin-like fold KD35_RS26550 PF13344 Haloacid dehalogenase-like hydrolase KD35_RS26560 PF01934 Protein of unknown function DUF86 KD35_RS26565 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KD35_RS26585 PF06265 Protein of unknown function (DUF1027) KD35_RS26590 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KD35_RS26595 PF07739 TipAS antibiotic-recognition domain KD35_RS26595 PF13411 MerR HTH family regulatory protein KD35_RS26600 PF10086 YhfC intramembrane metalloprotease KD35_RS26620 PF04055 Radical SAM superfamily KD35_RS26620 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KD35_RS26625 PF01551 Peptidase family M23 KD35_RS26635 PF08827 Domain of unknown function (DUF1805) KD35_RS26640 PF02872 5'-nucleotidase, C-terminal domain KD35_RS26650 PF03551 Transcriptional regulator PadR-like family KD35_RS26655 PF04892 VanZ like family KD35_RS26665 PF01458 Uncharacterized protein family (UPF0051) KD35_RS26670 PF01592 NifU-like N terminal domain KD35_RS26675 PF00266 Aminotransferase class-V KD35_RS26680 PF01458 Uncharacterized protein family (UPF0051) KD35_RS26685 PF00005 ABC transporter KD35_RS26690 PF03180 NLPA lipoprotein KD35_RS26695 PF03180 NLPA lipoprotein KD35_RS26700 PF00528 Binding-protein-dependent transport system inner membrane component KD35_RS26705 PF00005 ABC transporter KD35_RS26705 PF09383 NIL domain KD35_RS26720 PF00085 Thioredoxin KD35_RS26725 PF01751 Toprim domain KD35_RS26730 PF01597 Glycine cleavage H-protein KD35_RS26735 PF03960 ArsC family KD35_RS26785 PF00056 lactate/malate dehydrogenase, NAD binding domain KD35_RS26785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KD35_RS26805 PF13305 Tetracyclin repressor-like, C-terminal domain KD35_RS26805 PF00440 Bacterial regulatory proteins, tetR family KD35_RS26810 PF00753 Metallo-beta-lactamase superfamily KD35_RS26815 PF02770 Acyl-CoA dehydrogenase, middle domain KD35_RS26815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KD35_RS26815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KD35_RS26825 PF02803 Thiolase, C-terminal domain KD35_RS26825 PF00108 Thiolase, N-terminal domain KD35_RS26830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KD35_RS26830 PF00378 Enoyl-CoA hydratase/isomerase KD35_RS26830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KD35_RS26835 PF14115 YuzL-like protein KD35_RS26840 PF07943 Penicillin-binding protein 5, C-terminal domain KD35_RS26840 PF00768 D-alanyl-D-alanine carboxypeptidase KD35_RS26845 PF01619 Proline dehydrogenase KD35_RS26850 PF10835 Protein of unknown function (DUF2573) KD35_RS26855 PF01910 Thiamine-binding protein KD35_RS26860 PF02743 Cache domain KD35_RS26860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS26860 PF00672 HAMP domain KD35_RS26880 PF07690 Major Facilitator Superfamily KD35_RS26885 PF13520 Amino acid permease KD35_RS26895 PF02096 60Kd inner membrane protein KD35_RS26905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KD35_RS26905 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KD35_RS26940 PF09335 SNARE associated Golgi protein KD35_RS26950 PF03734 L,D-transpeptidase catalytic domain KD35_RS26950 PF17969 L,D-transpeptidase C-terminal domain KD35_RS26955 PF00072 Response regulator receiver domain KD35_RS26955 PF00486 Transcriptional regulatory protein, C terminal KD35_RS26960 PF16736 Single Cache-like KD35_RS26960 PF00512 His Kinase A (phospho-acceptor) domain KD35_RS26960 PF00989 PAS fold KD35_RS26960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KD35_RS26970 PF08264 Anticodon-binding domain of tRNA KD35_RS26970 PF09334 tRNA synthetases class I (M) KD35_RS26980 PF00672 HAMP domain KD35_RS26980 PF02743 Cache domain KD35_RS26980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS26985 PF01883 Iron-sulfur cluster assembly protein KD35_RS26990 PF02868 Thermolysin metallopeptidase, alpha-helical domain KD35_RS26990 PF01447 Thermolysin metallopeptidase, catalytic domain KD35_RS26990 PF03413 Peptidase propeptide and YPEB domain KD35_RS26990 PF07504 Fungalysin/Thermolysin Propeptide Motif KD35_RS26995 PF17954 Quercetinase C-terminal cupin domain KD35_RS26995 PF02678 Pirin KD35_RS27000 PF01047 MarR family KD35_RS27010 PF00999 Sodium/hydrogen exchanger family KD35_RS27015 PF02080 TrkA-C domain KD35_RS27025 PF01235 Sodium:alanine symporter family KD35_RS27030 PF00210 Ferritin-like domain KD35_RS27045 PF03641 Possible lysine decarboxylase KD35_RS27055 PF00210 Ferritin-like domain KD35_RS27060 PF04235 Protein of unknown function (DUF418) KD35_RS27070 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS27070 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS27075 PF07662 Na+ dependent nucleoside transporter C-terminus KD35_RS27075 PF01773 Na+ dependent nucleoside transporter N-terminus KD35_RS27080 PF01235 Sodium:alanine symporter family KD35_RS27085 PF01235 Sodium:alanine symporter family KD35_RS27090 PF13460 NAD(P)H-binding KD35_RS27105 PF00248 Aldo/keto reductase family KD35_RS27110 PF07690 Major Facilitator Superfamily KD35_RS27115 PF01638 HxlR-like helix-turn-helix KD35_RS27120 PF07849 Protein of unknown function (DUF1641) KD35_RS27125 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS27130 PF01479 S4 domain KD35_RS27130 PF00579 tRNA synthetases class I (W and Y) KD35_RS27135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KD35_RS27135 PF01565 FAD binding domain KD35_RS27145 PF00672 HAMP domain KD35_RS27145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KD35_RS27145 PF17202 Single cache domain 3 KD35_RS27155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KD35_RS27160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KD35_RS27175 PF13302 Acetyltransferase (GNAT) domain KD35_RS27180 PF06146 Phosphate-starvation-inducible E KD35_RS27195 PF00005 ABC transporter KD35_RS27200 PF01032 FecCD transport family KD35_RS27205 PF01032 FecCD transport family KD35_RS27215 PF00072 Response regulator receiver domain KD35_RS27215 PF00486 Transcriptional regulatory protein, C terminal KD35_RS27220 PF01668 SmpB protein KD35_RS27225 PF08206 Ribonuclease B OB domain KD35_RS27225 PF00773 RNB domain KD35_RS27225 PF00575 S1 RNA binding domain KD35_RS27225 PF17876 Cold shock domain KD35_RS27230 PF12146 Serine aminopeptidase, S33 KD35_RS27235 PF03840 Preprotein translocase SecG subunit KD35_RS27240 PF04172 LrgB-like family KD35_RS27245 PF03788 LrgA family KD35_RS27250 PF01156 Inosine-uridine preferring nucleoside hydrolase KD35_RS27340 PF04860 Phage portal protein KD35_RS27365 PF00589 Phage integrase family KD35_RS27365 PF02899 Phage integrase, N-terminal SAM-like domain KD35_RS27370 PF03952 Enolase, N-terminal domain KD35_RS27370 PF00113 Enolase, C-terminal TIM barrel domain KD35_RS27375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KD35_RS27375 PF01676 Metalloenzyme superfamily KD35_RS27380 PF00121 Triosephosphate isomerase KD35_RS27385 PF00162 Phosphoglycerate kinase KD35_RS27390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KD35_RS27390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KD35_RS27395 PF04198 Putative sugar-binding domain KD35_RS27405 PF04963 Sigma-54 factor, core binding domain KD35_RS27405 PF00309 Sigma-54 factor, Activator interacting domain (AID) KD35_RS27405 PF04552 Sigma-54, DNA binding domain KD35_RS27425 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KD35_RS27430 PF07451 Stage V sporulation protein AD (SpoVAD) KD35_RS27435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KD35_RS27445 PF04239 Protein of unknown function (DUF421) KD35_RS27450 PF00574 Clp protease KD35_RS27455 PF00381 PTS HPr component phosphorylation site KD35_RS27460 PF02650 WhiA C-terminal HTH domain KD35_RS27460 PF10298 WhiA N-terminal LAGLIDADG-like domain KD35_RS27460 PF14527 WhiA LAGLIDADG-like domain KD35_RS27465 PF01933 Uncharacterised protein family UPF0052 KD35_RS27470 PF03668 P-loop ATPase protein family KD35_RS27475 PF00293 NUDIX domain KD35_RS27485 PF07992 Pyridine nucleotide-disulphide oxidoreductase KD35_RS27495 PF14602 Hexapeptide repeat of succinyl-transferase KD35_RS27500 PF13419 Haloacid dehalogenase-like hydrolase KD35_RS27505 PF01790 Prolipoprotein diacylglyceryl transferase KD35_RS27510 PF07475 HPr Serine kinase C-terminal domain KD35_RS27510 PF02603 HPr Serine kinase N terminus KD35_RS27515 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KD35_RS27525 PF00005 ABC transporter KD35_RS27525 PF17760 UvrA interaction domain KD35_RS27525 PF17755 UvrA DNA-binding domain KD35_RS27530 PF02151 UvrB/uvrC motif KD35_RS27530 PF00271 Helicase conserved C-terminal domain KD35_RS27530 PF17757 UvrB interaction domain KD35_RS27530 PF12344 Ultra-violet resistance protein B KD35_RS27530 PF04851 Type III restriction enzyme, res subunit KD35_RS27535 PF12323 Helix-turn-helix domain KD35_RS27535 PF01385 Probable transposase KD35_RS27535 PF07282 Putative transposase DNA-binding domain KD35_RS27550 PF07739 TipAS antibiotic-recognition domain KD35_RS27550 PF13411 MerR HTH family regulatory protein KD35_RS27575 PF03601 Conserved hypothetical protein 698 KD35_RS27580 PF03466 LysR substrate binding domain KD35_RS27580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS27585 PF13411 MerR HTH family regulatory protein KD35_RS27590 PF03358 NADPH-dependent FMN reductase KD35_RS27600 PF01906 Putative heavy-metal-binding KD35_RS27605 PF00005 ABC transporter KD35_RS27605 PF00664 ABC transporter transmembrane region KD35_RS27610 PF17820 PDZ domain KD35_RS27615 PF01471 Putative peptidoglycan binding domain KD35_RS27615 PF03572 Peptidase family S41 KD35_RS27615 PF17820 PDZ domain KD35_RS27620 PF02687 FtsX-like permease family KD35_RS27620 PF18075 FtsX extracellular domain KD35_RS27625 PF00005 ABC transporter KD35_RS27630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KD35_RS27640 PF00472 RF-1 domain KD35_RS27640 PF03462 PCRF domain KD35_RS27645 PF07516 SecA Wing and Scaffold domain KD35_RS27645 PF01043 SecA preprotein cross-linking domain KD35_RS27645 PF07517 SecA DEAD-like domain KD35_RS27645 PF02810 SEC-C motif KD35_RS27650 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KD35_RS27650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KD35_RS27655 PF00313 'Cold-shock' DNA-binding domain KD35_RS27665 PF00271 Helicase conserved C-terminal domain KD35_RS27665 PF04851 Type III restriction enzyme, res subunit KD35_RS27670 PF01476 LysM domain KD35_RS27670 PF00877 NlpC/P60 family KD35_RS27675 PF01638 HxlR-like helix-turn-helix KD35_RS27685 PF02645 Uncharacterised protein, DegV family COG1307 KD35_RS27690 PF09186 Domain of unknown function (DUF1949) KD35_RS27690 PF01205 Uncharacterized protein family UPF0029 KD35_RS27695 PF03816 Cell envelope-related transcriptional attenuator domain KD35_RS27700 PF02350 UDP-N-acetylglucosamine 2-epimerase KD35_RS27705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS27705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS27705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS27710 PF00953 Glycosyl transferase family 4 KD35_RS27715 PF01522 Polysaccharide deacetylase KD35_RS27720 PF03610 PTS system fructose IIA component KD35_RS27720 PF00874 PRD domain KD35_RS27720 PF00158 Sigma-54 interaction domain KD35_RS27730 PF02417 Chromate transporter KD35_RS27735 PF04794 YdjC-like protein KD35_RS27740 PF11975 Family 4 glycosyl hydrolase C-terminal domain KD35_RS27740 PF02056 Family 4 glycosyl hydrolase KD35_RS27745 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KD35_RS27750 PF02378 Phosphotransferase system, EIIC KD35_RS27755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KD35_RS27765 PF02675 S-adenosylmethionine decarboxylase KD35_RS27770 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KD35_RS27775 PF02378 Phosphotransferase system, EIIC KD35_RS27780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KD35_RS27785 PF00375 Sodium:dicarboxylate symporter family KD35_RS27795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KD35_RS27805 PF03466 LysR substrate binding domain KD35_RS27805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KD35_RS28055 PF02350 UDP-N-acetylglucosamine 2-epimerase KD35_RS28065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS28065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS28065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS28565 PF07690 Major Facilitator Superfamily KD35_RS28585 PF00912 Transglycosylase KD35_RS28585 PF00905 Penicillin binding protein transpeptidase domain KD35_RS28940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KD35_RS28940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KD35_RS28940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KD35_RS29095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KD35_RS29155 PF02733 Dak1 domain