locus-tag	class	description
BF89_RS00085	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS00085	PF00563	EAL domain
BF89_RS00085	PF13185	GAF domain
BF89_RS00185	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS00185	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS00185	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS00190	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS00190	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS00190	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS00605	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS00605	PF00149	Calcineurin-like phosphoesterase
BF89_RS00650	PF00294	pfkB family carbohydrate kinase
BF89_RS00695	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS00695	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS00850	PF02638	Glycosyl hydrolase-like 10
BF89_RS01015	PF01593	Flavin containing amine oxidoreductase
BF89_RS01135	PF12146	Serine aminopeptidase, S33
BF89_RS01180	PF01235	Sodium:alanine symporter family
BF89_RS01305	PF01039	Carboxyl transferase domain
BF89_RS01310	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS01315	PF00682	HMGL-like
BF89_RS01320	PF00364	Biotin-requiring enzyme
BF89_RS01325	PF00289	Biotin carboxylase, N-terminal domain
BF89_RS01325	PF02785	Biotin carboxylase C-terminal domain
BF89_RS01325	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF89_RS01330	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS01330	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS01330	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS01345	PF08359	YsiA-like protein, C-terminal region
BF89_RS01345	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS01355	PF00005	ABC transporter
BF89_RS01370	PF00581	Rhodanese-like domain
BF89_RS01385	PF13302	Acetyltransferase (GNAT) domain
BF89_RS01390	PF00563	EAL domain
BF89_RS01390	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS01390	PF03707	Bacterial signalling protein N terminal repeat
BF89_RS01400	PF16326	ABC transporter C-terminal domain
BF89_RS01400	PF00005	ABC transporter
BF89_RS01405	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS01415	PF00395	S-layer homology domain
BF89_RS01415	PF01520	N-acetylmuramoyl-L-alanine amidase
BF89_RS01425	PF02557	D-alanyl-D-alanine carboxypeptidase
BF89_RS01440	PF01381	Helix-turn-helix
BF89_RS01455	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS01455	PF00149	Calcineurin-like phosphoesterase
BF89_RS01475	PF01116	Fructose-bisphosphate aldolase class-II
BF89_RS01485	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS01485	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS01485	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS01490	PF00171	Aldehyde dehydrogenase family
BF89_RS01495	PF00294	pfkB family carbohydrate kinase
BF89_RS01500	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF89_RS01500	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF89_RS01505	PF07690	Major Facilitator Superfamily
BF89_RS01510	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS01515	PF01569	PAP2 superfamily
BF89_RS01525	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS01525	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS01530	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS01530	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS01540	PF08281	Sigma-70, region 4
BF89_RS01540	PF04542	Sigma-70 region 2 
BF89_RS01555	PF07687	Peptidase dimerisation domain
BF89_RS01555	PF01546	Peptidase family M20/M25/M40
BF89_RS01585	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
BF89_RS01590	PF00300	Histidine phosphatase superfamily (branch 1)
BF89_RS01595	PF12802	MarR family
BF89_RS01600	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS01600	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS01600	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS01605	PF08241	Methyltransferase domain
BF89_RS01615	PF03848	Tellurite resistance protein TehB
BF89_RS01615	PF09313	Domain of unknown function (DUF1971)
BF89_RS01620	PF00005	ABC transporter
BF89_RS01620	PF02687	FtsX-like permease family
BF89_RS01620	PF12704	MacB-like periplasmic core domain
BF89_RS01640	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS01640	PF17932	Tetracyclin repressor-like, C-terminal domain
BF89_RS01655	PF00271	Helicase conserved C-terminal domain
BF89_RS01655	PF00270	DEAD/DEAH box helicase
BF89_RS01670	PF16123	Hydroxyacylglutathione hydrolase C-terminus
BF89_RS01670	PF00753	Metallo-beta-lactamase superfamily
BF89_RS01685	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS01690	PF00266	Aminotransferase class-V
BF89_RS01695	PF02660	Glycerol-3-phosphate acyltransferase
BF89_RS01700	PF01869	BadF/BadG/BcrA/BcrD ATPase family
BF89_RS01705	PF03702	Anhydro-N-acetylmuramic acid kinase
BF89_RS01715	PF02378	Phosphotransferase system, EIIC 
BF89_RS01725	PF02638	Glycosyl hydrolase-like 10
BF89_RS01750	PF08281	Sigma-70, region 4
BF89_RS01750	PF12680	SnoaL-like domain
BF89_RS01750	PF04542	Sigma-70 region 2 
BF89_RS01755	PF00890	FAD binding domain
BF89_RS01780	PF01381	Helix-turn-helix
BF89_RS01780	PF07883	Cupin domain
BF89_RS01785	PF01810	LysE type translocator
BF89_RS01800	PF00005	ABC transporter
BF89_RS01800	PF00664	ABC transporter transmembrane region
BF89_RS01805	PF00664	ABC transporter transmembrane region
BF89_RS01805	PF00005	ABC transporter
BF89_RS01820	PF03473	MOSC domain
BF89_RS01820	PF03475	3-alpha domain
BF89_RS01825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS01825	PF03466	LysR substrate binding domain
BF89_RS01840	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF89_RS01840	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF89_RS01845	PF03466	LysR substrate binding domain
BF89_RS01845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS01910	PF00313	'Cold-shock' DNA-binding domain
BF89_RS01920	PF13302	Acetyltransferase (GNAT) domain
BF89_RS01930	PF01593	Flavin containing amine oxidoreductase
BF89_RS01960	PF00583	Acetyltransferase (GNAT) family
BF89_RS01975	PF00302	Chloramphenicol acetyltransferase
BF89_RS01985	PF03176	MMPL family
BF89_RS01995	PF16123	Hydroxyacylglutathione hydrolase C-terminus
BF89_RS01995	PF00753	Metallo-beta-lactamase superfamily
BF89_RS02040	PF13649	Methyltransferase domain
BF89_RS02060	PF07690	Major Facilitator Superfamily
BF89_RS02065	PF12146	Serine aminopeptidase, S33
BF89_RS02080	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS02080	PF02824	TGS domain
BF89_RS02080	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF89_RS02080	PF03129	Anticodon binding domain
BF89_RS02085	PF01479	S4 domain
BF89_RS02085	PF00849	RNA pseudouridylate synthase
BF89_RS02090	PF16291	Domain of unknown function (DUF4937
BF89_RS02115	PF00082	Subtilase family
BF89_RS02120	PF05163	DinB family
BF89_RS02130	PF00216	Bacterial DNA-binding protein
BF89_RS02145	PF07690	Major Facilitator Superfamily
BF89_RS02150	PF03621	MbtH-like protein
BF89_RS02160	PF00550	Phosphopantetheine attachment site
BF89_RS02160	PF00857	Isochorismatase family
BF89_RS02165	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS02165	PF00501	AMP-binding enzyme
BF89_RS02170	PF00425	chorismate binding enzyme
BF89_RS02175	PF00106	short chain dehydrogenase
BF89_RS02180	PF07690	Major Facilitator Superfamily
BF89_RS02195	PF01022	Bacterial regulatory protein, arsR family
BF89_RS02210	PF13476	AAA domain
BF89_RS02215	PF00149	Calcineurin-like phosphoesterase
BF89_RS02215	PF12320	Type 5 capsule protein repressor C-terminal domain
BF89_RS02220	PF10763	Protein of unknown function (DUF2584)
BF89_RS02230	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS02235	PF01810	LysE type translocator
BF89_RS02240	PF00171	Aldehyde dehydrogenase family
BF89_RS02245	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BF89_RS02245	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF89_RS02250	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS02250	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS02250	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS02260	PF03972	MmgE/PrpD family
BF89_RS02265	PF00285	Citrate synthase, C-terminal domain
BF89_RS02270	PF01521	Iron-sulphur cluster biosynthesis
BF89_RS02275	PF07690	Major Facilitator Superfamily
BF89_RS02280	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS02280	PF00912	Transglycosylase
BF89_RS02300	PF10676	Spore germination protein gerPA/gerPF
BF89_RS02410	PF04471	Restriction endonuclease
BF89_RS02420	PF03424	Carbohydrate binding domain (family 17/28)
BF89_RS02420	PF00150	Cellulase (glycosyl hydrolase family 5)
BF89_RS02420	PF00395	S-layer homology domain
BF89_RS02425	PF14436	Bacterial EndoU nuclease
BF89_RS02425	PF04740	LXG domain of WXG superfamily
BF89_RS02440	PF00085	Thioredoxin
BF89_RS02445	PF16916	Dimerisation domain of Zinc Transporter
BF89_RS02445	PF01545	Cation efflux family
BF89_RS02450	PF01569	PAP2 superfamily
BF89_RS02455	PF07070	SpoOM protein
BF89_RS02470	PF14162	YozD-like protein
BF89_RS02485	PF06855	YozE SAM-like fold
BF89_RS02490	PF14122	YokU-like protein, putative antitoxin
BF89_RS02495	PF12544	Lysine-2,3-aminomutase 
BF89_RS02500	PF13426	PAS domain
BF89_RS02500	PF02954	Bacterial regulatory protein, Fis family
BF89_RS02500	PF00158	Sigma-54 interaction domain
BF89_RS02505	PF00583	Acetyltransferase (GNAT) family
BF89_RS02510	PF01546	Peptidase family M20/M25/M40
BF89_RS02510	PF07687	Peptidase dimerisation domain
BF89_RS02515	PF01144	Coenzyme A transferase
BF89_RS02520	PF01144	Coenzyme A transferase
BF89_RS02525	PF00202	Aminotransferase class-III
BF89_RS02535	PF09385	Histidine kinase N terminal
BF89_RS02540	PF07997	Protein of unknown function (DUF1694)
BF89_RS02545	PF00171	Aldehyde dehydrogenase family
BF89_RS02550	PF01595	Cyclin M transmembrane N-terminal domain
BF89_RS02550	PF03471	Transporter associated domain
BF89_RS02550	PF00571	CBS domain
BF89_RS02580	PF13520	Amino acid permease
BF89_RS02585	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS02590	PF00571	CBS domain
BF89_RS02590	PF00005	ABC transporter
BF89_RS02605	PF03358	NADPH-dependent FMN reductase
BF89_RS02620	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS02620	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS02625	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS02625	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS02640	PF00144	Beta-lactamase
BF89_RS02655	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS02655	PF00107	Zinc-binding dehydrogenase
BF89_RS02660	PF01380	SIS domain
BF89_RS02660	PF01418	Helix-turn-helix domain, rpiR family
BF89_RS02670	PF00072	Response regulator receiver domain
BF89_RS02670	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS02675	PF13185	GAF domain
BF89_RS02675	PF07730	Histidine kinase
BF89_RS02680	PF00924	Mechanosensitive ion channel
BF89_RS02685	PF00011	Hsp20/alpha crystallin family
BF89_RS02710	PF00881	Nitroreductase family
BF89_RS02715	PF01063	Amino-transferase class IV
BF89_RS02720	PF01497	Periplasmic binding protein
BF89_RS02735	PF13537	Glutamine amidotransferase domain
BF89_RS02735	PF00733	Asparagine synthase
BF89_RS02740	PF00011	Hsp20/alpha crystallin family
BF89_RS02745	PF02630	SCO1/SenC
BF89_RS02755	PF02645	Uncharacterised protein, DegV family COG1307
BF89_RS02765	PF00902	Sec-independent protein translocase protein (TatC)
BF89_RS02770	PF02416	mttA/Hcf106 family
BF89_RS02775	PF03006	Haemolysin-III related
BF89_RS02780	PF01553	Acyltransferase
BF89_RS02785	PF02525	Flavodoxin-like fold
BF89_RS02790	PF05223	NTF2-like N-terminal transpeptidase domain
BF89_RS02790	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS02790	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS02795	PF00186	Dihydrofolate reductase
BF89_RS02800	PF00303	Thymidylate synthase
BF89_RS02805	PF07930	D-aminopeptidase, domain B
BF89_RS02805	PF00144	Beta-lactamase
BF89_RS02825	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS02830	PF14005	YpjP-like protein
BF89_RS02835	PF05975	Bacterial ABC transporter protein EcsB
BF89_RS02840	PF00005	ABC transporter
BF89_RS02855	PF00583	Acetyltransferase (GNAT) family
BF89_RS02860	PF01980	tRNA-methyltransferase O
BF89_RS02865	PF01177	Asp/Glu/Hydantoin racemase
BF89_RS02870	PF00465	Iron-containing alcohol dehydrogenase 
BF89_RS02880	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS02885	PF10997	Alternate to MurJ
BF89_RS02900	PF00209	Sodium:neurotransmitter symporter family
BF89_RS02915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS02915	PF00672	HAMP domain
BF89_RS02915	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS02920	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS02920	PF00072	Response regulator receiver domain
BF89_RS02925	PF00939	Sodium:sulfate symporter transmembrane region
BF89_RS02930	PF02595	Glycerate kinase family
BF89_RS03025	PF12538	DNA transporter 
BF89_RS03025	PF01580	FtsK/SpoIIIE family
BF89_RS03045	PF00152	tRNA synthetases class II (D, K and N) 
BF89_RS03045	PF01336	OB-fold nucleic acid binding domain
BF89_RS03050	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS03050	PF08245	Mur ligase middle domain
BF89_RS03050	PF01225	Mur ligase family, catalytic domain
BF89_RS03065	PF08264	Anticodon-binding domain of tRNA
BF89_RS03065	PF00133	tRNA synthetases class I (I, L, M and V)
BF89_RS03090	PF00750	tRNA synthetases class I (R)
BF89_RS03090	PF05746	DALR anticodon binding domain
BF89_RS03090	PF03485	Arginyl tRNA synthetase N terminal domain
BF89_RS03095	PF04445	Putative SAM-dependent methyltransferase
BF89_RS03100	PF06491	Disulphide isomerase
BF89_RS03110	PF13769	Virulence factor
BF89_RS03110	PF08712	Scaffold protein Nfu/NifU N terminal
BF89_RS03115	PF01494	FAD binding domain
BF89_RS03125	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS03130	PF00436	Single-strand binding protein family
BF89_RS03145	PF12848	ABC transporter
BF89_RS03145	PF00005	ABC transporter
BF89_RS03145	PF16326	ABC transporter C-terminal domain
BF89_RS03150	PF01966	HD domain
BF89_RS03165	PF01510	N-acetylmuramoyl-L-alanine amidase
BF89_RS03180	PF04232	Stage V sporulation protein S (SpoVS)
BF89_RS03215	PF01814	Hemerythrin HHE cation binding domain
BF89_RS03215	PF04405	Domain of Unknown function (DUF542)  
BF89_RS03220	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BF89_RS03220	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS03220	PF18267	Rubredoxin NAD+ reductase C-terminal domain
BF89_RS03220	PF04324	BFD-like [2Fe-2S] binding domain
BF89_RS03220	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BF89_RS03225	PF00355	Rieske [2Fe-2S] domain
BF89_RS03230	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF89_RS03235	PF01903	CbiX
BF89_RS03255	PF07690	Major Facilitator Superfamily
BF89_RS03265	PF02391	MoaE protein
BF89_RS03270	PF00994	Probable molybdopterin binding domain
BF89_RS03270	PF03454	MoeA C-terminal region (domain IV)
BF89_RS03270	PF03453	MoeA N-terminal region (domain I and II)
BF89_RS03275	PF00899	ThiF family
BF89_RS03280	PF04055	Radical SAM superfamily
BF89_RS03280	PF06463	Molybdenum Cofactor Synthesis C
BF89_RS03285	PF00325	Bacterial regulatory proteins, crp family
BF89_RS03285	PF00027	Cyclic nucleotide-binding domain
BF89_RS03295	PF00005	ABC transporter
BF89_RS03300	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS03300	PF00155	Aminotransferase class I and II
BF89_RS03305	PF02665	Nitrate reductase gamma subunit
BF89_RS03310	PF02613	Nitrate reductase delta subunit
BF89_RS03315	PF14711	Respiratory nitrate reductase beta C-terminal
BF89_RS03315	PF13247	4Fe-4S dicluster domain
BF89_RS03320	PF14710	Respiratory nitrate reductase alpha N-terminal
BF89_RS03320	PF01568	Molydopterin dinucleotide binding domain
BF89_RS03320	PF00384	Molybdopterin oxidoreductase
BF89_RS03335	PF17863	AAA lid domain
BF89_RS03335	PF07726	ATPase family associated with various cellular activities (AAA)
BF89_RS03340	PF01882	Protein of unknown function DUF58
BF89_RS03345	PF01841	Transglutaminase-like superfamily
BF89_RS03345	PF11992	Domain of unknown function (DUF3488)
BF89_RS03345	PF13559	Domain of unknown function (DUF4129)
BF89_RS03350	PF00255	Glutathione peroxidase
BF89_RS03375	PF08281	Sigma-70, region 4
BF89_RS03375	PF04542	Sigma-70 region 2 
BF89_RS03380	PF00107	Zinc-binding dehydrogenase
BF89_RS03380	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS03390	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS03395	PF01261	Xylose isomerase-like TIM barrel
BF89_RS03400	PF00270	DEAD/DEAH box helicase
BF89_RS03400	PF00271	Helicase conserved C-terminal domain
BF89_RS03410	PF01268	Formate--tetrahydrofolate ligase
BF89_RS03440	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF89_RS03490	PF00583	Acetyltransferase (GNAT) family
BF89_RS03515	PF00155	Aminotransferase class I and II
BF89_RS03515	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS03520	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS03520	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS03525	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BF89_RS03540	PF13847	Methyltransferase domain
BF89_RS03545	PF01168	Alanine racemase, N-terminal domain
BF89_RS03545	PF00842	Alanine racemase, C-terminal domain
BF89_RS03560	PF00300	Histidine phosphatase superfamily (branch 1)
BF89_RS03575	PF07690	Major Facilitator Superfamily
BF89_RS03580	PF01425	Amidase
BF89_RS03590	PF02557	D-alanyl-D-alanine carboxypeptidase
BF89_RS03600	PF07454	Stage II sporulation protein P (SpoIIP)
BF89_RS03620	PF01588	Putative tRNA binding domain
BF89_RS03625	PF05525	Branched-chain amino acid transport protein
BF89_RS03640	PF00571	CBS domain
BF89_RS03640	PF03471	Transporter associated domain
BF89_RS03640	PF01595	Cyclin M transmembrane N-terminal domain
BF89_RS03645	PF04306	Protein of unknown function (DUF456)
BF89_RS03650	PF13460	NAD(P)H-binding 
BF89_RS03665	PF13396	Phospholipase_D-nuclease N-terminal
BF89_RS03665	PF13091	PLD-like domain
BF89_RS03670	PF03061	Thioesterase superfamily
BF89_RS03675	PF09323	Domain of unknown function (DUF1980)
BF89_RS03680	PF03773	Predicted permease
BF89_RS03690	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS03690	PF01943	Polysaccharide biosynthesis protein
BF89_RS03695	PF09335	SNARE associated Golgi protein
BF89_RS03700	PF00293	NUDIX domain
BF89_RS03705	PF08757	CotH kinase protein
BF89_RS03715	PF00300	Histidine phosphatase superfamily (branch 1)
BF89_RS03725	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS03730	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS03740	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BF89_RS03740	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BF89_RS03745	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BF89_RS03750	PF13460	NAD(P)H-binding 
BF89_RS03760	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
BF89_RS03760	PF01297	Zinc-uptake complex component A periplasmic
BF89_RS03825	PF00583	Acetyltransferase (GNAT) family
BF89_RS03830	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF89_RS03830	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF89_RS03835	PF00248	Aldo/keto reductase family
BF89_RS03845	PF01593	Flavin containing amine oxidoreductase
BF89_RS03855	PF00296	Luciferase-like monooxygenase
BF89_RS03870	PF00210	Ferritin-like domain
BF89_RS03895	PF02743	Cache domain
BF89_RS03895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS03895	PF00672	HAMP domain
BF89_RS03900	PF03193	RsgA GTPase
BF89_RS03920	PF07690	Major Facilitator Superfamily
BF89_RS03925	PF00248	Aldo/keto reductase family
BF89_RS03930	PF01022	Bacterial regulatory protein, arsR family
BF89_RS03935	PF00082	Subtilase family
BF89_RS03940	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF89_RS03940	PF18277	AbrB C-terminal domain
BF89_RS03945	PF02687	FtsX-like permease family
BF89_RS03950	PF02540	NAD synthase
BF89_RS03955	PF00293	NUDIX domain
BF89_RS03955	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS03980	PF01734	Patatin-like phospholipase
BF89_RS03990	PF01810	LysE type translocator
BF89_RS03995	PF07690	Major Facilitator Superfamily
BF89_RS04000	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS04005	PF01261	Xylose isomerase-like TIM barrel
BF89_RS04020	PF00501	AMP-binding enzyme
BF89_RS04020	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS04025	PF06276	Ferric iron reductase FhuF-like transporter
BF89_RS04025	PF04183	IucA / IucC family
BF89_RS04030	PF06276	Ferric iron reductase FhuF-like transporter
BF89_RS04030	PF04183	IucA / IucC family
BF89_RS04035	PF00583	Acetyltransferase (GNAT) family
BF89_RS04040	PF02308	MgtC family
BF89_RS04050	PF01522	Polysaccharide deacetylase
BF89_RS04055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS04055	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS04055	PF00989	PAS fold
BF89_RS04055	PF16736	Single Cache-like 
BF89_RS04060	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS04060	PF00072	Response regulator receiver domain
BF89_RS04070	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS04085	PF00288	GHMP kinases N terminal domain
BF89_RS04085	PF08544	GHMP kinases C terminal 
BF89_RS04090	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS04095	PF00742	Homoserine dehydrogenase
BF89_RS04095	PF01842	ACT domain
BF89_RS04095	PF03447	Homoserine dehydrogenase, NAD binding domain
BF89_RS04115	PF01522	Polysaccharide deacetylase
BF89_RS04120	PF04439	Streptomycin adenylyltransferase
BF89_RS04130	PF00106	short chain dehydrogenase
BF89_RS04145	PF00072	Response regulator receiver domain
BF89_RS04145	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS04150	PF00005	ABC transporter
BF89_RS04150	PF00664	ABC transporter transmembrane region
BF89_RS04155	PF00664	ABC transporter transmembrane region
BF89_RS04155	PF00005	ABC transporter
BF89_RS04165	PF00877	NlpC/P60 family
BF89_RS04165	PF01476	LysM domain
BF89_RS04180	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS04180	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS04185	PF02016	LD-carboxypeptidase N-terminal domain
BF89_RS04185	PF17676	LD-carboxypeptidase C-terminal domain
BF89_RS04200	PF00005	ABC transporter
BF89_RS04200	PF00664	ABC transporter transmembrane region
BF89_RS04205	PF00005	ABC transporter
BF89_RS04205	PF00664	ABC transporter transmembrane region
BF89_RS04210	PF02322	Cytochrome bd terminal oxidase subunit II
BF89_RS04215	PF01654	Cytochrome bd terminal oxidase subunit I
BF89_RS04225	PF01047	MarR family
BF89_RS04235	PF14552	Tautomerase enzyme
BF89_RS04245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS04245	PF03466	LysR substrate binding domain
BF89_RS04255	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS04260	PF00005	ABC transporter
BF89_RS04265	PF00005	ABC transporter
BF89_RS04265	PF12399	Branched-chain amino acid ATP-binding cassette transporter
BF89_RS04275	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF89_RS04275	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF89_RS04280	PF01575	MaoC like domain
BF89_RS04285	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS04285	PF00501	AMP-binding enzyme
BF89_RS04300	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF89_RS04300	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF89_RS04305	PF01593	Flavin containing amine oxidoreductase
BF89_RS04310	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF89_RS04310	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF89_RS04315	PF01594	AI-2E family transporter
BF89_RS04320	PF01425	Amidase
BF89_RS04330	PF00881	Nitroreductase family
BF89_RS04335	PF01323	DSBA-like thioredoxin domain
BF89_RS04340	PF02082	Transcriptional regulator
BF89_RS04345	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS04345	PF03466	LysR substrate binding domain
BF89_RS04350	PF00892	EamA-like transporter family
BF89_RS04360	PF07987	Domain of unkown function (DUF1775)
BF89_RS04365	PF05425	Copper resistance protein D
BF89_RS04365	PF13115	YtkA-like
BF89_RS04365	PF04234	CopC domain
BF89_RS04380	PF02525	Flavodoxin-like fold
BF89_RS04395	PF01396	Topoisomerase DNA binding C4 zinc finger
BF89_RS04395	PF13342	C-terminal repeat of topoisomerase
BF89_RS04395	PF01751	Toprim domain
BF89_RS04395	PF01131	DNA topoisomerase
BF89_RS04405	PF01551	Peptidase family M23
BF89_RS04410	PF07731	Multicopper oxidase
BF89_RS04410	PF07732	Multicopper oxidase
BF89_RS04415	PF00557	Metallopeptidase family M24
BF89_RS04415	PF05195	Aminopeptidase P, N-terminal domain
BF89_RS04435	PF05979	Bacterial protein of unknown function (DUF896)
BF89_RS04445	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF89_RS04450	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BF89_RS04450	PF00591	Glycosyl transferase family, a/b domain
BF89_RS04450	PF02885	Glycosyl transferase family, helical bundle domain
BF89_RS04455	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS04455	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS04460	PF01791	DeoC/LacD family aldolase
BF89_RS04465	PF04198	Putative sugar-binding domain
BF89_RS04475	PF05791	Bacillus haemolytic enterotoxin (HBL)
BF89_RS04480	PF05791	Bacillus haemolytic enterotoxin (HBL)
BF89_RS04500	PF02558	Ketopantoate reductase PanE/ApbA
BF89_RS04500	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BF89_RS04510	PF12368	Rhodanase C-terminal
BF89_RS04510	PF17773	UPF0176 acylphosphatase like domain
BF89_RS04510	PF00581	Rhodanese-like domain
BF89_RS04515	PF01566	Natural resistance-associated macrophage protein
BF89_RS04530	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS04530	PF00072	Response regulator receiver domain
BF89_RS04535	PF13302	Acetyltransferase (GNAT) domain
BF89_RS04540	PF13186	Iron-sulfur cluster-binding domain
BF89_RS04540	PF04055	Radical SAM superfamily
BF89_RS04565	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS04570	PF12146	Serine aminopeptidase, S33
BF89_RS04570	PF13026	Protein of unknown function (DUF3887)
BF89_RS04575	PF01979	Amidohydrolase family
BF89_RS04590	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
BF89_RS04590	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
BF89_RS04595	PF00072	Response regulator receiver domain
BF89_RS04595	PF04397	LytTr DNA-binding domain
BF89_RS04605	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
BF89_RS04635	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS04635	PF00585	C-terminal regulatory domain of Threonine dehydratase
BF89_RS04640	PF00920	Dehydratase family
BF89_RS04645	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BF89_RS04645	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BF89_RS04650	PF10369	Small subunit of acetolactate synthase
BF89_RS04655	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS04655	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS04655	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS04660	PF01063	Amino-transferase class IV
BF89_RS04670	PF01625	Peptide methionine sulfoxide reductase
BF89_RS04685	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF89_RS04685	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BF89_RS04700	PF04239	Protein of unknown function (DUF421)
BF89_RS04710	PF01522	Polysaccharide deacetylase
BF89_RS04710	PF00457	Glycosyl hydrolases family 11
BF89_RS04710	PF03422	Carbohydrate binding module (family 6)
BF89_RS04715	PF00209	Sodium:neurotransmitter symporter family
BF89_RS04720	PF01943	Polysaccharide biosynthesis protein
BF89_RS04720	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS04750	PF13167	GTP-binding GTPase N-terminal
BF89_RS04750	PF01926	50S ribosome-binding GTPase
BF89_RS04750	PF16360	GTP-binding GTPase Middle Region
BF89_RS04760	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF89_RS04760	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF89_RS04765	PF07690	Major Facilitator Superfamily
BF89_RS04770	PF03976	Polyphosphate kinase 2 (PPK2)
BF89_RS04775	PF02554	Carbon starvation protein CstA
BF89_RS04790	PF07690	Major Facilitator Superfamily
BF89_RS04800	PF13205	Bacterial Ig-like domain
BF89_RS04800	PF02368	Bacterial Ig-like domain (group 2)
BF89_RS04800	PF00395	S-layer homology domain
BF89_RS04810	PF14158	YndJ-like protein
BF89_RS04815	PF13761	Domain of unknown function (DUF4166)
BF89_RS04830	PF00696	Amino acid kinase family
BF89_RS04830	PF13840	ACT domain 
BF89_RS04845	PF03590	Aspartate-ammonia ligase
BF89_RS04865	PF04434	SWIM zinc finger
BF89_RS04865	PF00176	SNF2 family N-terminal domain
BF89_RS04865	PF00271	Helicase conserved C-terminal domain
BF89_RS04870	PF08664	YcbB domain
BF89_RS04870	PF00072	Response regulator receiver domain
BF89_RS04875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS04880	PF03949	Malic enzyme, NAD binding domain
BF89_RS04880	PF00390	Malic enzyme, N-terminal domain
BF89_RS04885	PF00206	Lyase
BF89_RS04885	PF10415	Fumarase C C-terminus
BF89_RS04890	PF00375	Sodium:dicarboxylate symporter family
BF89_RS04895	PF00696	Amino acid kinase family
BF89_RS04900	PF13091	PLD-like domain
BF89_RS04915	PF00005	ABC transporter
BF89_RS04920	PF13492	GAF domain
BF89_RS04920	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS04920	PF07730	Histidine kinase
BF89_RS04920	PF13185	GAF domain
BF89_RS04925	PF00072	Response regulator receiver domain
BF89_RS04925	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS04950	PF04286	Protein of unknown function (DUF445)
BF89_RS04955	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS04980	PF00578	AhpC/TSA family
BF89_RS04985	PF02683	Cytochrome C biogenesis protein transmembrane region
BF89_RS05005	PF03575	Peptidase family S51
BF89_RS05035	PF10415	Fumarase C C-terminus
BF89_RS05035	PF00206	Lyase
BF89_RS05040	PF03553	Na+/H+ antiporter family
BF89_RS05045	PF00535	Glycosyl transferase family 2
BF89_RS05055	PF03773	Predicted permease
BF89_RS05060	PF07683	Cobalamin synthesis protein cobW C-terminal domain
BF89_RS05060	PF02492	CobW/HypB/UreG, nucleotide-binding domain
BF89_RS05065	PF00892	EamA-like transporter family
BF89_RS05070	PF07729	FCD domain
BF89_RS05070	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS05080	PF01545	Cation efflux family
BF89_RS05080	PF16916	Dimerisation domain of Zinc Transporter
BF89_RS05100	PF13537	Glutamine amidotransferase domain
BF89_RS05100	PF00733	Asparagine synthase
BF89_RS05140	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS05140	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS05155	PF10787	Uncharacterised protein from bacillus cereus group
BF89_RS05165	PF00753	Metallo-beta-lactamase superfamily
BF89_RS05165	PF12706	Beta-lactamase superfamily domain
BF89_RS05170	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS05180	PF08402	TOBE domain
BF89_RS05180	PF00005	ABC transporter
BF89_RS05205	PF08141	Small acid-soluble spore protein H family
BF89_RS05210	PF03992	Antibiotic biosynthesis monooxygenase
BF89_RS05225	PF17329	Family of unknown function (DUF5367)
BF89_RS05230	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS05230	PF17932	Tetracyclin repressor-like, C-terminal domain
BF89_RS05255	PF01411	tRNA synthetases class II (A)
BF89_RS05255	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF89_RS05255	PF02272	DHHA1 domain
BF89_RS05260	PF00460	Flagella basal body rod protein
BF89_RS05260	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF89_RS05265	PF00448	SRP54-type protein, GTPase domain
BF89_RS05270	PF00771	FHIPEP family
BF89_RS05275	PF01312	FlhB HrpN YscU SpaS Family
BF89_RS05285	PF01313	Bacterial export proteins, family 3
BF89_RS05290	PF00813	FliP family
BF89_RS05300	PF04509	CheC-like family
BF89_RS05300	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BF89_RS05315	PF01464	Transglycosylase SLT domain
BF89_RS05320	PF00700	Bacterial flagellin C-terminal helical region
BF89_RS05320	PF00669	Bacterial flagellin N-terminal helical region
BF89_RS05345	PF13181	Tetratricopeptide repeat
BF89_RS05345	PF00535	Glycosyl transferase family 2
BF89_RS05375	PF00535	Glycosyl transferase family 2
BF89_RS05380	PF12181	DNA binding domain of the motility gene repressor (MogR)
BF89_RS05385	PF01584	CheW-like domain
BF89_RS05385	PF00072	Response regulator receiver domain
BF89_RS05400	PF00460	Flagella basal body rod protein
BF89_RS05400	PF07559	Flagellar basal body protein FlaE
BF89_RS05400	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF89_RS05425	PF18269	T3SS EscN ATPase C-terminal domain
BF89_RS05425	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF89_RS05425	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF89_RS05435	PF01706	FliG C-terminal domain
BF89_RS05435	PF14842	FliG N-terminal domain
BF89_RS05435	PF14841	FliG middle domain
BF89_RS05445	PF01514	Secretory protein of YscJ/FliF family
BF89_RS05445	PF08345	Flagellar M-ring protein C-terminal
BF89_RS05450	PF02049	Flagellar hook-basal body complex protein FliE
BF89_RS05455	PF00460	Flagella basal body rod protein
BF89_RS05455	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF89_RS05460	PF00460	Flagella basal body rod protein
BF89_RS05485	PF00700	Bacterial flagellin C-terminal helical region
BF89_RS05485	PF00669	Bacterial flagellin N-terminal helical region
BF89_RS05490	PF00460	Flagella basal body rod protein
BF89_RS05490	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
BF89_RS05510	PF01739	CheR methyltransferase, SAM binding domain
BF89_RS05510	PF03705	CheR methyltransferase, all-alpha domain
BF89_RS05525	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
BF89_RS05525	PF04509	CheC-like family
BF89_RS05535	PF00072	Response regulator receiver domain
BF89_RS05540	PF00691	OmpA family
BF89_RS05540	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
BF89_RS05545	PF01618	MotA/TolQ/ExbB proton channel family
BF89_RS05555	PF17209	Hfq protein
BF89_RS05600	PF00881	Nitroreductase family
BF89_RS05610	PF02698	DUF218 domain
BF89_RS05615	PF04239	Protein of unknown function (DUF421)
BF89_RS05625	PF06445	GyrI-like small molecule binding domain
BF89_RS05625	PF13411	MerR HTH family regulatory protein
BF89_RS05630	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF89_RS05630	PF17770	Ribonuclease J C-terminal domain
BF89_RS05630	PF00753	Metallo-beta-lactamase superfamily
BF89_RS05635	PF00999	Sodium/hydrogen exchanger family
BF89_RS05645	PF00202	Aminotransferase class-III
BF89_RS05650	PF00474	Sodium:solute symporter family
BF89_RS05655	PF04341	Protein of unknown function, DUF485
BF89_RS05670	PF01810	LysE type translocator
BF89_RS05680	PF00313	'Cold-shock' DNA-binding domain
BF89_RS05705	PF01263	Aldose 1-epimerase
BF89_RS05710	PF13456	Reverse transcriptase-like
BF89_RS05735	PF13673	Acetyltransferase (GNAT) domain
BF89_RS05735	PF18014	Acetyltransferase (GNAT) domain
BF89_RS05755	PF00535	Glycosyl transferase family 2
BF89_RS05770	PF02397	Bacterial sugar transferase
BF89_RS05795	PF01367	5'-3' exonuclease, C-terminal SAM fold
BF89_RS05795	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BF89_RS05800	PF00690	Cation transporter/ATPase, N-terminus
BF89_RS05800	PF00689	Cation transporting ATPase, C-terminus
BF89_RS05810	PF03738	Glutathionylspermidine synthase preATP-grasp
BF89_RS05825	PF00581	Rhodanese-like domain
BF89_RS05830	PF10752	Protein of unknown function (DUF2533) 
BF89_RS05835	PF00583	Acetyltransferase (GNAT) family
BF89_RS05845	PF00350	Dynamin family
BF89_RS05850	PF04235	Protein of unknown function (DUF418)
BF89_RS05855	PF00860	Permease family
BF89_RS05860	PF00156	Phosphoribosyl transferase domain
BF89_RS05865	PF00557	Metallopeptidase family M24
BF89_RS05870	PF01636	Phosphotransferase enzyme family
BF89_RS05880	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
BF89_RS05885	PF13307	Helicase C-terminal domain
BF89_RS05895	PF01170	Putative RNA methylase family UPF0020
BF89_RS05895	PF02926	THUMP domain
BF89_RS05900	PF05103	DivIVA protein
BF89_RS05905	PF06908	YspA SLOG family
BF89_RS05935	PF10720	Protein of unknown function (DUF2515)
BF89_RS05940	PF03838	Recombination protein U
BF89_RS05945	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS05945	PF00912	Transglycosylase
BF89_RS05955	PF10576	Iron-sulfur binding domain of endonuclease III
BF89_RS05955	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF89_RS05955	PF00633	Helix-hairpin-helix motif
BF89_RS05960	PF07261	Replication initiation and membrane attachment
BF89_RS05965	PF00155	Aminotransferase class I and II
BF89_RS05975	PF14084	Protein of unknown function (DUF4264)
BF89_RS05985	PF02261	Aspartate decarboxylase
BF89_RS05990	PF02569	Pantoate-beta-alanine ligase
BF89_RS05995	PF02548	Ketopantoate hydroxymethyltransferase
BF89_RS06010	PF03099	Biotin/lipoate A/B protein ligase family
BF89_RS06010	PF02237	Biotin protein ligase C terminal domain
BF89_RS06010	PF08279	HTH domain
BF89_RS06015	PF01743	Poly A polymerase head domain
BF89_RS06015	PF12627	Probable RNA and SrmB- binding site of polymerase A
BF89_RS06015	PF13735	tRNA nucleotidyltransferase domain 2 putative
BF89_RS06020	PF13439	Glycosyltransferase Family 4
BF89_RS06020	PF00534	Glycosyl transferases group 1
BF89_RS06025	PF02585	GlcNAc-PI de-N-acetylase
BF89_RS06030	PF02142	MGS-like domain
BF89_RS06035	PF05173	Dihydrodipicolinate reductase, C-terminus
BF89_RS06035	PF01113	Dihydrodipicolinate reductase, N-terminus
BF89_RS06040	PF03819	MazG nucleotide pyrophosphohydrolase domain
BF89_RS06045	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS06045	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS06055	PF04298	Putative neutral zinc metallopeptidase
BF89_RS06060	PF09577	Sporulation protein YpjB (SpoYpjB)
BF89_RS06070	PF07187	Protein of unknown function (DUF1405)
BF89_RS06075	PF00032	Cytochrome b(C-terminal)/b6/petD
BF89_RS06075	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF89_RS06080	PF00033	Cytochrome b/b6/petB
BF89_RS06085	PF00355	Rieske [2Fe-2S] domain
BF89_RS06090	PF10673	Protein of unknown function (DUF2487)
BF89_RS06095	PF08858	IDEAL domain
BF89_RS06095	PF08864	UPF0302 domain
BF89_RS06105	PF00155	Aminotransferase class I and II
BF89_RS06110	PF01761	3-dehydroquinate synthase
BF89_RS06115	PF01264	Chorismate synthase
BF89_RS06120	PF00334	Nucleoside diphosphate kinase
BF89_RS06125	PF00348	Polyprenyl synthetase
BF89_RS06130	PF01209	ubiE/COQ5 methyltransferase family
BF89_RS06135	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
BF89_RS06140	PF01227	GTP cyclohydrolase I
BF89_RS06145	PF00216	Bacterial DNA-binding protein
BF89_RS06150	PF09547	Stage IV sporulation protein A (spore_IV_A)
BF89_RS06160	PF10966	Protein of unknown function (DUF2768)
BF89_RS06170	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
BF89_RS06170	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
BF89_RS06175	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
BF89_RS06175	PF01926	50S ribosome-binding GTPase
BF89_RS06185	PF14045	YIEGIA protein
BF89_RS06195	PF14140	YpzI-like protein
BF89_RS06200	PF01070	FMN-dependent dehydrogenase
BF89_RS06205	PF00575	S1 RNA binding domain
BF89_RS06210	PF02224	Cytidylate kinase
BF89_RS06220	PF17763	Glutaminase/Asparaginase C-terminal domain
BF89_RS06220	PF00710	Asparaginase, N-terminal
BF89_RS06245	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BF89_RS06245	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BF89_RS06250	PF05389	Negative regulator of genetic competence (MecA)
BF89_RS06255	PF13411	MerR HTH family regulatory protein
BF89_RS06255	PF02607	B12 binding domain
BF89_RS06255	PF02310	B12 binding domain
BF89_RS06270	PF02517	CPBP intramembrane metalloprotease
BF89_RS06275	PF00271	Helicase conserved C-terminal domain
BF89_RS06275	PF00270	DEAD/DEAH box helicase
BF89_RS06280	PF14493	Helix-turn-helix domain
BF89_RS06290	PF12822	ECF transporter, substrate-specific component
BF89_RS06305	PF01923	Cobalamin adenosyltransferase
BF89_RS06310	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS06310	PF00989	PAS fold
BF89_RS06310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS06310	PF00672	HAMP domain
BF89_RS06310	PF18698	Histidine kinase sensor domain
BF89_RS06315	PF00072	Response regulator receiver domain
BF89_RS06315	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS06320	PF01578	Cytochrome C assembly protein
BF89_RS06325	PF05140	ResB-like family 
BF89_RS06330	PF00578	AhpC/TSA family
BF89_RS06335	PF01479	S4 domain
BF89_RS06335	PF00849	RNA pseudouridylate synthase
BF89_RS06340	PF07670	Nucleoside recognition
BF89_RS06345	PF07670	Nucleoside recognition
BF89_RS06350	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS06350	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS06355	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF89_RS06355	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF89_RS06370	PF03706	Lysylphosphatidylglycerol synthase TM region
BF89_RS06370	PF09924	Uncharacterised conserved protein (DUF2156)
BF89_RS06385	PF01048	Phosphorylase superfamily
BF89_RS06390	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS06390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS06390	PF16736	Single Cache-like 
BF89_RS06390	PF00989	PAS fold
BF89_RS06395	PF00589	Phage integrase family
BF89_RS06405	PF01904	Protein of unknown function DUF72
BF89_RS06410	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS06410	PF00989	PAS fold
BF89_RS06410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS06425	PF00912	Transglycosylase
BF89_RS06425	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS06430	PF01865	Protein of unknown function DUF47
BF89_RS06435	PF01384	Phosphate transporter family
BF89_RS06440	PF01925	Sulfite exporter TauE/SafE
BF89_RS06460	PF00175	Oxidoreductase NAD-binding domain 
BF89_RS06460	PF00970	Oxidoreductase FAD-binding domain
BF89_RS06460	PF00042	Globin
BF89_RS06485	PF08241	Methyltransferase domain
BF89_RS06495	PF05525	Branched-chain amino acid transport protein
BF89_RS06505	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS06505	PF00072	Response regulator receiver domain
BF89_RS06510	PF07730	Histidine kinase
BF89_RS06510	PF00672	HAMP domain
BF89_RS06510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS06515	PF09922	Cell wall-active antibiotics response 4TMS YvqF
BF89_RS06530	PF03553	Na+/H+ antiporter family
BF89_RS06540	PF00375	Sodium:dicarboxylate symporter family
BF89_RS06550	PF00209	Sodium:neurotransmitter symporter family
BF89_RS06565	PF01903	CbiX
BF89_RS06570	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF89_RS06580	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
BF89_RS06580	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
BF89_RS06590	PF01747	ATP-sulfurylase
BF89_RS06590	PF14306	PUA-like domain
BF89_RS06595	PF01507	Phosphoadenosine phosphosulfate reductase family
BF89_RS06605	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
BF89_RS06605	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
BF89_RS06615	PF00884	Sulfatase
BF89_RS06620	PF01066	CDP-alcohol phosphatidyltransferase
BF89_RS06625	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF89_RS06625	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF89_RS06635	PF02811	PHP domain
BF89_RS06640	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
BF89_RS06645	PF01502	Phosphoribosyl-AMP cyclohydrolase
BF89_RS06650	PF00977	Histidine biosynthesis protein
BF89_RS06655	PF00977	Histidine biosynthesis protein
BF89_RS06660	PF00117	Glutamine amidotransferase class-I
BF89_RS06665	PF00475	Imidazoleglycerol-phosphate dehydratase
BF89_RS06670	PF00815	Histidinol dehydrogenase
BF89_RS06675	PF01634	ATP phosphoribosyltransferase
BF89_RS06680	PF13393	Histidyl-tRNA synthetase
BF89_RS06685	PF00694	Aconitase C-terminal domain
BF89_RS06690	PF00330	Aconitase family (aconitate hydratase)
BF89_RS06695	PF00180	Isocitrate/isopropylmalate dehydrogenase
BF89_RS06700	PF08502	LeuA allosteric (dimerisation) domain
BF89_RS06700	PF00682	HMGL-like
BF89_RS06705	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
BF89_RS06705	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
BF89_RS06710	PF10369	Small subunit of acetolactate synthase
BF89_RS06710	PF01842	ACT domain
BF89_RS06715	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS06715	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS06715	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS06720	PF01063	Amino-transferase class IV
BF89_RS06735	PF03698	Uncharacterised protein family (UPF0180)
BF89_RS06750	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF89_RS06760	PF02386	Cation transport protein
BF89_RS06765	PF00375	Sodium:dicarboxylate symporter family
BF89_RS06775	PF01047	MarR family
BF89_RS06790	PF02673	Bacitracin resistance protein BacA
BF89_RS06795	PF01554	MatE
BF89_RS06815	PF01636	Phosphotransferase enzyme family
BF89_RS06830	PF00258	Flavodoxin
BF89_RS06840	PF01546	Peptidase family M20/M25/M40
BF89_RS06840	PF07687	Peptidase dimerisation domain
BF89_RS06850	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS06850	PF00501	AMP-binding enzyme
BF89_RS06855	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF89_RS06860	PF00550	Phosphopantetheine attachment site
BF89_RS06865	PF04914	DltD protein
BF89_RS06870	PF03060	Nitronate monooxygenase
BF89_RS06875	PF02016	LD-carboxypeptidase N-terminal domain
BF89_RS06875	PF17676	LD-carboxypeptidase C-terminal domain
BF89_RS06885	PF00857	Isochorismatase family
BF89_RS06895	PF01037	Lrp/AsnC ligand binding domain
BF89_RS06915	PF00005	ABC transporter
BF89_RS06925	PF00005	ABC transporter
BF89_RS06930	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS06935	PF00268	Ribonucleotide reductase, small chain
BF89_RS06940	PF02867	Ribonucleotide reductase, barrel domain
BF89_RS06940	PF00317	Ribonucleotide reductase, all-alpha domain
BF89_RS06940	PF08343	Ribonucleotide reductase N-terminal
BF89_RS06955	PF07972	NrdI Flavodoxin like 
BF89_RS06990	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
BF89_RS06995	PF14489	QueF-like protein
BF89_RS07000	PF04055	Radical SAM superfamily
BF89_RS07005	PF01242	6-pyruvoyl tetrahydropterin synthase
BF89_RS07010	PF06508	Queuosine biosynthesis protein QueC
BF89_RS07015	PF00989	PAS fold
BF89_RS07015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS07015	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS07015	PF13188	PAS domain
BF89_RS07015	PF13426	PAS domain
BF89_RS07025	PF12867	DinB superfamily
BF89_RS07035	PF01047	MarR family
BF89_RS07040	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS07040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS07040	PF02743	Cache domain
BF89_RS07045	PF09388	Spo0E like sporulation regulatory protein
BF89_RS07050	PF04748	Divergent polysaccharide deacetylase
BF89_RS07075	PF08220	DeoR-like helix-turn-helix domain
BF89_RS07075	PF00455	DeoR C terminal sensor domain
BF89_RS07085	PF00266	Aminotransferase class-V
BF89_RS07090	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS07095	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS07120	PF02386	Cation transport protein
BF89_RS07125	PF01266	FAD dependent oxidoreductase
BF89_RS07130	PF00561	alpha/beta hydrolase fold
BF89_RS07155	PF01575	MaoC like domain
BF89_RS07160	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS07170	PF03741	Integral membrane protein TerC family
BF89_RS07175	PF01226	Formate/nitrite transporter
BF89_RS07185	PF01478	Type IV leader peptidase family
BF89_RS07185	PF06750	Bacterial Peptidase A24 N-terminal domain
BF89_RS07190	PF02589	LUD domain
BF89_RS07195	PF02589	LUD domain
BF89_RS07195	PF13183	4Fe-4S dicluster domain
BF89_RS07195	PF11870	Domain of unknown function (DUF3390)
BF89_RS07200	PF02754	Cysteine-rich domain
BF89_RS07205	PF07729	FCD domain
BF89_RS07205	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS07210	PF00672	HAMP domain
BF89_RS07210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS07210	PF18698	Histidine kinase sensor domain
BF89_RS07210	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS07210	PF00989	PAS fold
BF89_RS07215	PF00072	Response regulator receiver domain
BF89_RS07215	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS07225	PF05651	Putative sugar diacid recognition
BF89_RS07225	PF13556	PucR C-terminal helix-turn-helix domain
BF89_RS07225	PF17853	GGDEF-like domain
BF89_RS07230	PF01565	FAD binding domain 
BF89_RS07230	PF02913	FAD linked oxidases, C-terminal domain
BF89_RS07235	PF13183	4Fe-4S dicluster domain
BF89_RS07235	PF02754	Cysteine-rich domain
BF89_RS07240	PF00188	Cysteine-rich secretory protein family
BF89_RS07250	PF01479	S4 domain
BF89_RS07250	PF00849	RNA pseudouridylate synthase
BF89_RS07260	PF03176	MMPL family
BF89_RS07270	PF13416	Bacterial extracellular solute-binding protein
BF89_RS07275	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS07280	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS07285	PF00005	ABC transporter
BF89_RS07285	PF08402	TOBE domain
BF89_RS07290	PF00171	Aldehyde dehydrogenase family
BF89_RS07295	PF05547	Immune inhibitor A peptidase M6
BF89_RS07305	PF01381	Helix-turn-helix
BF89_RS07305	PF08671	Anti-repressor SinI
BF89_RS07310	PF12389	Camelysin metallo-endopeptidase
BF89_RS07320	PF12389	Camelysin metallo-endopeptidase
BF89_RS07330	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS07330	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS07340	PF13649	Methyltransferase domain
BF89_RS07400	PF01381	Helix-turn-helix
BF89_RS07405	PF16870	2-oxoglutarate dehydrogenase C-terminal
BF89_RS07405	PF00676	Dehydrogenase E1 component
BF89_RS07405	PF02779	Transketolase, pyrimidine binding domain
BF89_RS07410	PF02817	e3 binding domain
BF89_RS07410	PF00364	Biotin-requiring enzyme
BF89_RS07410	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF89_RS07440	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS07440	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS07460	PF10042	Uncharacterized conserved protein (DUF2278)
BF89_RS07465	PF02652	L-lactate permease
BF89_RS07475	PF00290	Tryptophan synthase alpha chain
BF89_RS07480	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS07485	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
BF89_RS07490	PF00218	Indole-3-glycerol phosphate synthase
BF89_RS07495	PF00591	Glycosyl transferase family, a/b domain
BF89_RS07495	PF02885	Glycosyl transferase family, helical bundle domain
BF89_RS07500	PF00117	Glutamine amidotransferase class-I
BF89_RS07500	PF02885	Glycosyl transferase family, helical bundle domain
BF89_RS07500	PF00591	Glycosyl transferase family, a/b domain
BF89_RS07505	PF00425	chorismate binding enzyme
BF89_RS07505	PF04715	Anthranilate synthase component I, N terminal region
BF89_RS07515	PF00474	Sodium:solute symporter family
BF89_RS07520	PF02368	Bacterial Ig-like domain (group 2)
BF89_RS07535	PF00756	Putative esterase
BF89_RS07545	PF13673	Acetyltransferase (GNAT) domain
BF89_RS07550	PF13361	UvrD-like helicase C-terminal domain
BF89_RS07550	PF00580	UvrD/REP helicase N-terminal domain
BF89_RS07570	PF07098	Protein of unknown function (DUF1360)
BF89_RS07590	PF04321	RmlD substrate binding domain
BF89_RS07595	PF16363	GDP-mannose 4,6 dehydratase
BF89_RS07600	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
BF89_RS07605	PF00483	Nucleotidyl transferase
BF89_RS07625	PF00535	Glycosyl transferase family 2
BF89_RS07625	PF13181	Tetratricopeptide repeat
BF89_RS07635	PF05711	Macrocin-O-methyltransferase (TylF)
BF89_RS07640	PF08241	Methyltransferase domain
BF89_RS07645	PF00535	Glycosyl transferase family 2
BF89_RS07650	PF01098	Cell cycle protein
BF89_RS07655	PF00149	Calcineurin-like phosphoesterase
BF89_RS07665	PF00849	RNA pseudouridylate synthase
BF89_RS07670	PF01513	ATP-NAD kinase
BF89_RS07675	PF04607	Region found in RelA / SpoT proteins
BF89_RS07685	PF01928	CYTH domain
BF89_RS07690	PF01152	Bacterial-like globin
BF89_RS07705	PF01432	Peptidase family M3
BF89_RS07705	PF08439	Oligopeptidase F
BF89_RS07715	PF13091	PLD-like domain
BF89_RS07715	PF13396	Phospholipase_D-nuclease N-terminal
BF89_RS07720	PF05389	Negative regulator of genetic competence (MecA)
BF89_RS07730	PF03960	ArsC family
BF89_RS07745	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS07750	PF01554	MatE
BF89_RS07755	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS07755	PF00005	ABC transporter
BF89_RS07760	PF00005	ABC transporter
BF89_RS07760	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS07765	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF89_RS07765	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS07770	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS07775	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS07785	PF00579	tRNA synthetases class I (W and Y)
BF89_RS07790	PF12227	Protein of unknown function (DUF3603)
BF89_RS07795	PF10026	Predicted Zn-dependent protease (DUF2268)
BF89_RS07800	PF02801	Beta-ketoacyl synthase, C-terminal domain
BF89_RS07800	PF00109	Beta-ketoacyl synthase, N-terminal domain
BF89_RS07805	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF89_RS07805	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF89_RS07810	PF10815	ComZ
BF89_RS07830	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS07830	PF17871	AAA lid domain
BF89_RS07830	PF02861	Clp amino terminal domain, pathogenicity island component
BF89_RS07830	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF89_RS07830	PF07724	AAA domain (Cdc48 subfamily)
BF89_RS07835	PF14168	YjzC-like protein
BF89_RS07855	PF12758	Protein of unknown function (DUF3813)
BF89_RS07870	PF00639	PPIC-type PPIASE domain
BF89_RS07880	PF13509	S1 domain
BF89_RS07880	PF17783	CvfB-like winged helix domain
BF89_RS07885	PF04461	Protein of unknown function (DUF520)
BF89_RS07895	PF00128	Alpha amylase, catalytic domain
BF89_RS07905	PF00909	Ammonium Transporter Family
BF89_RS07910	PF00199	Catalase
BF89_RS07910	PF06628	Catalase-related immune-responsive
BF89_RS07915	PF00762	Ferrochelatase
BF89_RS07920	PF13537	Glutamine amidotransferase domain
BF89_RS07920	PF00733	Asparagine synthase
BF89_RS07930	PF07457	Protein of unknown function (DUF1516)
BF89_RS07935	PF00202	Aminotransferase class-III
BF89_RS07945	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BF89_RS07950	PF09388	Spo0E like sporulation regulatory protein
BF89_RS07955	PF10676	Spore germination protein gerPA/gerPF
BF89_RS07960	PF10803	Spore germination GerPB
BF89_RS07965	PF10737	Spore germination protein GerPC
BF89_RS07975	PF10970	Spore germination protein GerPE 
BF89_RS07980	PF10676	Spore germination protein gerPA/gerPF
BF89_RS07990	PF00580	UvrD/REP helicase N-terminal domain
BF89_RS07990	PF13361	UvrD-like helicase C-terminal domain
BF89_RS07990	PF12705	PD-(D/E)XK nuclease superfamily
BF89_RS07995	PF12705	PD-(D/E)XK nuclease superfamily
BF89_RS07995	PF13361	UvrD-like helicase C-terminal domain
BF89_RS08000	PF10502	Signal peptidase, peptidase S26 
BF89_RS08005	PF09335	SNARE associated Golgi protein
BF89_RS08010	PF06338	ComK protein
BF89_RS08025	PF00313	'Cold-shock' DNA-binding domain
BF89_RS08035	PF00463	Isocitrate lyase family
BF89_RS08040	PF01274	Malate synthase
BF89_RS08045	PF00395	S-layer homology domain
BF89_RS08055	PF00150	Cellulase (glycosyl hydrolase family 5)
BF89_RS08055	PF00395	S-layer homology domain
BF89_RS08055	PF03424	Carbohydrate binding domain (family 17/28)
BF89_RS08060	PF00892	EamA-like transporter family
BF89_RS08065	PF02743	Cache domain
BF89_RS08065	PF00672	HAMP domain
BF89_RS08065	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS08070	PF16491	CAAX prenyl protease N-terminal, five membrane helices
BF89_RS08070	PF01435	Peptidase family M48
BF89_RS08095	PF00072	Response regulator receiver domain
BF89_RS08095	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS08100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS08100	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS08115	PF06445	GyrI-like small molecule binding domain
BF89_RS08115	PF12833	Helix-turn-helix domain
BF89_RS08120	PF08281	Sigma-70, region 4
BF89_RS08120	PF04542	Sigma-70 region 2 
BF89_RS08130	PF01966	HD domain
BF89_RS08135	PF00149	Calcineurin-like phosphoesterase
BF89_RS08145	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BF89_RS08180	PF05593	RHS Repeat
BF89_RS08195	PF05593	RHS Repeat
BF89_RS08200	PF01520	N-acetylmuramoyl-L-alanine amidase
BF89_RS08200	PF00395	S-layer homology domain
BF89_RS08210	PF00501	AMP-binding enzyme
BF89_RS08210	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS08220	PF03099	Biotin/lipoate A/B protein ligase family
BF89_RS08220	PF10437	Bacterial lipoate protein ligase C-terminus
BF89_RS08225	PF12706	Beta-lactamase superfamily domain
BF89_RS08230	PF14149	YhfH-like protein
BF89_RS08235	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS08265	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS08265	PF17932	Tetracyclin repressor-like, C-terminal domain
BF89_RS08275	PF03965	Penicillinase repressor
BF89_RS08300	PF01593	Flavin containing amine oxidoreductase
BF89_RS08305	PF00762	Ferrochelatase
BF89_RS08310	PF01208	Uroporphyrinogen decarboxylase (URO-D)
BF89_RS08315	PF00912	Transglycosylase
BF89_RS08315	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS08320	PF03992	Antibiotic biosynthesis monooxygenase
BF89_RS08325	PF03703	Bacterial PH domain
BF89_RS08330	PF03703	Bacterial PH domain
BF89_RS08375	PF03703	Bacterial PH domain
BF89_RS08385	PF03703	Bacterial PH domain
BF89_RS08395	PF17934	Tetracyclin repressor-like, C-terminal domain
BF89_RS08395	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS08400	PF12787	EcsC protein family
BF89_RS08405	PF05975	Bacterial ABC transporter protein EcsB
BF89_RS08410	PF00005	ABC transporter
BF89_RS08415	PF01230	HIT domain
BF89_RS08420	PF12732	YtxH-like protein
BF89_RS08425	PF01047	MarR family
BF89_RS08450	PF13538	UvrD-like helicase C-terminal domain
BF89_RS08460	PF07690	Major Facilitator Superfamily
BF89_RS08465	PF07690	Major Facilitator Superfamily
BF89_RS08490	PF04542	Sigma-70 region 2 
BF89_RS08490	PF08281	Sigma-70, region 4
BF89_RS08505	PF01266	FAD dependent oxidoreductase
BF89_RS08505	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
BF89_RS08510	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS08510	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS08515	PF00230	Major intrinsic protein
BF89_RS08520	PF04309	Glycerol-3-phosphate responsive antiterminator
BF89_RS08540	PF08386	TAP-like protein
BF89_RS08540	PF00561	alpha/beta hydrolase fold
BF89_RS08545	PF18801	response regulator aspartate phosphatase H, N terminal
BF89_RS08550	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS08555	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS08560	PF07690	Major Facilitator Superfamily
BF89_RS08565	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS08570	PF01336	OB-fold nucleic acid binding domain
BF89_RS08570	PF01966	HD domain
BF89_RS08580	PF12323	Helix-turn-helix domain
BF89_RS08580	PF01385	Probable transposase
BF89_RS08580	PF07282	Putative transposase DNA-binding domain
BF89_RS08585	PF13514	AAA domain
BF89_RS08590	PF00149	Calcineurin-like phosphoesterase
BF89_RS08605	PF11121	Protein of unknown function (DUF2639)
BF89_RS08610	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS08610	PF00107	Zinc-binding dehydrogenase
BF89_RS08625	PF01906	Putative heavy-metal-binding
BF89_RS08650	PF01627	Hpt domain
BF89_RS08650	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS08650	PF00072	Response regulator receiver domain
BF89_RS08650	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF89_RS08650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS08655	PF03705	CheR methyltransferase, all-alpha domain
BF89_RS08655	PF01739	CheR methyltransferase, SAM binding domain
BF89_RS08660	PF13426	PAS domain
BF89_RS08660	PF07228	Stage II sporulation protein E (SpoIIE)
BF89_RS08670	PF04542	Sigma-70 region 2 
BF89_RS08670	PF04545	Sigma-70, region 4
BF89_RS08670	PF04539	Sigma-70 region 3
BF89_RS08675	PF13581	Histidine kinase-like ATPase domain
BF89_RS08680	PF01740	STAS domain
BF89_RS08695	PF05532	CsbD-like
BF89_RS08700	PF11181	Heat induced stress protein YflT
BF89_RS08725	PF00395	S-layer homology domain
BF89_RS08745	PF00672	HAMP domain
BF89_RS08745	PF01966	HD domain
BF89_RS08770	PF02082	Transcriptional regulator
BF89_RS08775	PF02525	Flavodoxin-like fold
BF89_RS08790	PF02733	Dak1 domain
BF89_RS08810	PF01066	CDP-alcohol phosphatidyltransferase
BF89_RS08830	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS08830	PF18665	Tetracyclin repressor-like, C-terminal domain
BF89_RS08885	PF07690	Major Facilitator Superfamily
BF89_RS08900	PF01925	Sulfite exporter TauE/SafE
BF89_RS08925	PF00772	DnaB-like helicase N terminal domain
BF89_RS08925	PF03796	DnaB-like helicase C terminal domain
BF89_RS08940	PF06445	GyrI-like small molecule binding domain
BF89_RS08940	PF13411	MerR HTH family regulatory protein
BF89_RS08965	PF02342	TerD domain
BF89_RS08970	PF03401	Tripartite tricarboxylate transporter family receptor
BF89_RS08975	PF12431	Transcriptional regulator 
BF89_RS08975	PF08279	HTH domain
BF89_RS08975	PF00072	Response regulator receiver domain
BF89_RS08980	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF89_RS08980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS08985	PF00083	Sugar (and other) transporter
BF89_RS09015	PF00005	ABC transporter
BF89_RS09015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS09025	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS09025	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF89_RS09030	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS09035	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS09060	PF18593	CdiI immunity protein
BF89_RS09065	PF02423	Ornithine cyclodeaminase/mu-crystallin family
BF89_RS09070	PF05544	Proline racemase
BF89_RS09075	PF11121	Protein of unknown function (DUF2639)
BF89_RS09085	PF01520	N-acetylmuramoyl-L-alanine amidase
BF89_RS09085	PF00395	S-layer homology domain
BF89_RS09090	PF05343	M42 glutamyl aminopeptidase
BF89_RS09110	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS09125	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF89_RS09130	PF03062	MBOAT, membrane-bound O-acyltransferase family
BF89_RS09140	PF00395	S-layer homology domain
BF89_RS09145	PF00395	S-layer homology domain
BF89_RS09145	PF02368	Bacterial Ig-like domain (group 2)
BF89_RS09145	PF13205	Bacterial Ig-like domain
BF89_RS09155	PF01943	Polysaccharide biosynthesis protein
BF89_RS09155	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS09160	PF07516	SecA Wing and Scaffold domain
BF89_RS09160	PF07517	SecA DEAD-like domain
BF89_RS09160	PF01043	SecA preprotein cross-linking domain
BF89_RS09180	PF01740	STAS domain
BF89_RS09180	PF00916	Sulfate permease family
BF89_RS09190	PF00501	AMP-binding enzyme
BF89_RS09190	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS09195	PF04055	Radical SAM superfamily
BF89_RS09215	PF02245	Methylpurine-DNA glycosylase (MPG)
BF89_RS09225	PF03306	Alpha-acetolactate decarboxylase
BF89_RS09230	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS09230	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS09230	PF00205	Thiamine pyrophosphate enzyme, central domain
BF89_RS09245	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF89_RS09250	PF04286	Protein of unknown function (DUF445)
BF89_RS09260	PF14398	YheC/D like ATP-grasp
BF89_RS09270	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS09275	PF00005	ABC transporter
BF89_RS09280	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS09285	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF89_RS09300	PF00005	ABC transporter
BF89_RS09300	PF00664	ABC transporter transmembrane region
BF89_RS09310	PF00171	Aldehyde dehydrogenase family
BF89_RS09320	PF01177	Asp/Glu/Hydantoin racemase
BF89_RS09325	PF13520	Amino acid permease
BF89_RS09335	PF00199	Catalase
BF89_RS09335	PF06628	Catalase-related immune-responsive
BF89_RS09335	PF18011	C-terminal domain found in long catalases
BF89_RS09340	PF01965	DJ-1/PfpI family
BF89_RS09350	PF07690	Major Facilitator Superfamily
BF89_RS09355	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS09355	PF12793	Sugar transport-related sRNA regulator N-term
BF89_RS09360	PF02525	Flavodoxin-like fold
BF89_RS09370	PF01638	HxlR-like helix-turn-helix
BF89_RS09375	PF07690	Major Facilitator Superfamily
BF89_RS09380	PF17934	Tetracyclin repressor-like, C-terminal domain
BF89_RS09380	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS09385	PF00893	Small Multidrug Resistance protein
BF89_RS09390	PF00893	Small Multidrug Resistance protein
BF89_RS09400	PF01037	Lrp/AsnC ligand binding domain
BF89_RS09405	PF00892	EamA-like transporter family
BF89_RS09420	PF07681	DoxX
BF89_RS09430	PF00367	phosphotransferase system, EIIB
BF89_RS09430	PF02378	Phosphotransferase system, EIIC 
BF89_RS09435	PF01380	SIS domain
BF89_RS09440	PF01418	Helix-turn-helix domain, rpiR family
BF89_RS09440	PF01380	SIS domain
BF89_RS09450	PF00999	Sodium/hydrogen exchanger family
BF89_RS09455	PF13520	Amino acid permease
BF89_RS09495	PF09335	SNARE associated Golgi protein
BF89_RS09505	PF02735	Ku70/Ku80 beta-barrel domain
BF89_RS09520	PF11007	Spore coat associated protein JA (CotJA)
BF89_RS09525	PF12652	CotJB protein
BF89_RS09530	PF05067	Manganese containing catalase
BF89_RS09535	PF05525	Branched-chain amino acid transport protein
BF89_RS09550	PF09529	Integral membrane protein (intg_mem_TP0381)
BF89_RS09560	PF00005	ABC transporter
BF89_RS09565	PF02687	FtsX-like permease family
BF89_RS09565	PF12704	MacB-like periplasmic core domain
BF89_RS09570	PF06725	3D domain
BF89_RS09570	PF01476	LysM domain
BF89_RS09585	PF02378	Phosphotransferase system, EIIC 
BF89_RS09590	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF89_RS09595	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF89_RS09600	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BF89_RS09600	PF08279	HTH domain
BF89_RS09600	PF05043	Mga helix-turn-helix domain
BF89_RS09600	PF00874	PRD domain
BF89_RS09610	PF07690	Major Facilitator Superfamily
BF89_RS09615	PF02690	Na+/Pi-cotransporter
BF89_RS09620	PF00107	Zinc-binding dehydrogenase
BF89_RS09620	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS09625	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS09635	PF01925	Sulfite exporter TauE/SafE
BF89_RS09640	PF13686	DsrE/DsrF/DrsH-like family
BF89_RS09650	PF00581	Rhodanese-like domain
BF89_RS09655	PF01206	Sulfurtransferase TusA
BF89_RS09660	PF00581	Rhodanese-like domain
BF89_RS09660	PF00753	Metallo-beta-lactamase superfamily
BF89_RS09665	PF00581	Rhodanese-like domain
BF89_RS09665	PF01206	Sulfurtransferase TusA
BF89_RS09670	PF02583	Metal-sensitive transcriptional repressor
BF89_RS09675	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS09675	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS09700	PF04293	SpoVR like protein
BF89_RS09705	PF00881	Nitroreductase family
BF89_RS09715	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS09735	PF14148	YhdB-like protein
BF89_RS09740	PF02600	Disulfide bond formation protein DsbB
BF89_RS09745	PF00085	Thioredoxin
BF89_RS09755	PF13407	Periplasmic binding protein domain
BF89_RS09755	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS09760	PF02378	Phosphotransferase system, EIIC 
BF89_RS09760	PF00367	phosphotransferase system, EIIB
BF89_RS09765	PF00251	Glycosyl hydrolases family 32 N-terminal domain
BF89_RS09765	PF08244	Glycosyl hydrolases family 32 C terminal
BF89_RS09770	PF00294	pfkB family carbohydrate kinase
BF89_RS09780	PF03734	L,D-transpeptidase catalytic domain
BF89_RS09780	PF17969	L,D-transpeptidase C-terminal domain
BF89_RS09790	PF00860	Permease family
BF89_RS09805	PF01047	MarR family
BF89_RS09810	PF07690	Major Facilitator Superfamily
BF89_RS09815	PF02702	Osmosensitive K+ channel His kinase sensor domain
BF89_RS09820	PF02669	K+-transporting ATPase, c chain
BF89_RS09830	PF03814	Potassium-transporting ATPase A subunit
BF89_RS09860	PF08543	Phosphomethylpyrimidine kinase
BF89_RS09865	PF00899	ThiF family
BF89_RS09870	PF05690	Thiazole biosynthesis protein ThiG
BF89_RS09875	PF02597	ThiS family
BF89_RS09880	PF01266	FAD dependent oxidoreductase
BF89_RS09885	PF02581	Thiamine monophosphate synthase
BF89_RS09890	PF09084	NMT1/THI5 like
BF89_RS09895	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS09900	PF00005	ABC transporter
BF89_RS09905	PF03070	TENA/THI-4/PQQC family
BF89_RS09910	PF00246	Zinc carboxypeptidase
BF89_RS09910	PF08239	Bacterial SH3 domain
BF89_RS09930	PF00571	CBS domain
BF89_RS10050	PF00873	AcrB/AcrD/AcrF family
BF89_RS10060	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10065	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10070	PF12849	PBP superfamily domain
BF89_RS10075	PF02421	Ferrous iron transport protein B
BF89_RS10075	PF17910	FeoB cytosolic helical domain
BF89_RS10075	PF07670	Nucleoside recognition
BF89_RS10075	PF04023	FeoA domain
BF89_RS10075	PF07664	Ferrous iron transport protein B C terminus
BF89_RS10080	PF17910	FeoB cytosolic helical domain
BF89_RS10080	PF02421	Ferrous iron transport protein B
BF89_RS10080	PF07670	Nucleoside recognition
BF89_RS10080	PF07664	Ferrous iron transport protein B C terminus
BF89_RS10085	PF17910	FeoB cytosolic helical domain
BF89_RS10085	PF07664	Ferrous iron transport protein B C terminus
BF89_RS10085	PF02421	Ferrous iron transport protein B
BF89_RS10085	PF07670	Nucleoside recognition
BF89_RS10095	PF05504	Spore germination B3/ GerAC like, C-terminal 
BF89_RS10100	PF03845	Spore germination protein
BF89_RS10105	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS10110	PF00474	Sodium:solute symporter family
BF89_RS10115	PF11755	Protein of unknown function (DUF3311)
BF89_RS10120	PF01546	Peptidase family M20/M25/M40
BF89_RS10120	PF07687	Peptidase dimerisation domain
BF89_RS10125	PF13529	Peptidase_C39 like family
BF89_RS10130	PF00324	Amino acid permease
BF89_RS10135	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BF89_RS10140	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BF89_RS10145	PF00510	Cytochrome c oxidase subunit III
BF89_RS10155	PF00999	Sodium/hydrogen exchanger family
BF89_RS10155	PF02080	TrkA-C domain
BF89_RS10155	PF02254	TrkA-N domain
BF89_RS10180	PF00860	Permease family
BF89_RS10185	PF00324	Amino acid permease
BF89_RS10200	PF05525	Branched-chain amino acid transport protein
BF89_RS10205	PF00854	POT family
BF89_RS10210	PF04203	Sortase domain
BF89_RS10220	PF01381	Helix-turn-helix
BF89_RS10225	PF06725	3D domain
BF89_RS10225	PF01476	LysM domain
BF89_RS10230	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS10230	PF00672	HAMP domain
BF89_RS10230	PF02743	Cache domain
BF89_RS10235	PF02673	Bacitracin resistance protein BacA
BF89_RS10260	PF03372	Endonuclease/Exonuclease/phosphatase family
BF89_RS10265	PF00882	Zinc dependent phospholipase C
BF89_RS10275	PF00107	Zinc-binding dehydrogenase
BF89_RS10275	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS10290	PF05547	Immune inhibitor A peptidase M6
BF89_RS10295	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BF89_RS10300	PF13407	Periplasmic binding protein domain
BF89_RS10305	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS10310	PF00005	ABC transporter
BF89_RS10315	PF05025	RbsD / FucU transport protein family
BF89_RS10320	PF00294	pfkB family carbohydrate kinase
BF89_RS10325	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS10330	PF07690	Major Facilitator Superfamily
BF89_RS10335	PF07690	Major Facilitator Superfamily
BF89_RS10340	PF01047	MarR family
BF89_RS10345	PF07690	Major Facilitator Superfamily
BF89_RS10350	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS10350	PF00005	ABC transporter
BF89_RS10355	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS10355	PF00005	ABC transporter
BF89_RS10360	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10365	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10370	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS10380	PF00582	Universal stress protein family
BF89_RS10385	PF00916	Sulfate permease family
BF89_RS10385	PF01740	STAS domain
BF89_RS10395	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS10395	PF00072	Response regulator receiver domain
BF89_RS10400	PF00672	HAMP domain
BF89_RS10400	PF00989	PAS fold
BF89_RS10400	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS10400	PF18698	Histidine kinase sensor domain
BF89_RS10400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS10405	PF01872	RibD C-terminal domain
BF89_RS10410	PF08279	HTH domain
BF89_RS10410	PF13280	WYL domain
BF89_RS10435	PF00324	Amino acid permease
BF89_RS10440	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10445	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10450	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF89_RS10455	PF00005	ABC transporter
BF89_RS10460	PF01235	Sodium:alanine symporter family
BF89_RS10465	PF01636	Phosphotransferase enzyme family
BF89_RS10475	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS10490	PF00128	Alpha amylase, catalytic domain
BF89_RS10490	PF16657	Maltogenic Amylase, C-terminal domain
BF89_RS10495	PF02378	Phosphotransferase system, EIIC 
BF89_RS10495	PF00367	phosphotransferase system, EIIB
BF89_RS10500	PF07702	UTRA domain
BF89_RS10500	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS10505	PF13520	Amino acid permease
BF89_RS10510	PF03707	Bacterial signalling protein N terminal repeat
BF89_RS10510	PF00563	EAL domain
BF89_RS10510	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS10525	PF13396	Phospholipase_D-nuclease N-terminal
BF89_RS10525	PF13091	PLD-like domain
BF89_RS10530	PF07728	AAA domain (dynein-related subfamily)
BF89_RS10535	PF00092	von Willebrand factor type A domain
BF89_RS10540	PF00293	NUDIX domain
BF89_RS10540	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS10545	PF01370	NAD dependent epimerase/dehydratase family
BF89_RS10550	PF00155	Aminotransferase class I and II
BF89_RS10555	PF08241	Methyltransferase domain
BF89_RS10560	PF00005	ABC transporter
BF89_RS10565	PF01032	FecCD transport family
BF89_RS10570	PF01032	FecCD transport family
BF89_RS10575	PF01497	Periplasmic binding protein
BF89_RS10580	PF00854	POT family
BF89_RS10585	PF08141	Small acid-soluble spore protein H family
BF89_RS10590	PF01022	Bacterial regulatory protein, arsR family
BF89_RS10595	PF02652	L-lactate permease
BF89_RS10600	PF00206	Lyase
BF89_RS10600	PF10415	Fumarase C C-terminus
BF89_RS10605	PF00571	CBS domain
BF89_RS10605	PF03471	Transporter associated domain
BF89_RS10605	PF01595	Cyclin M transmembrane N-terminal domain
BF89_RS10610	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS10615	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS10615	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS10620	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS10625	PF04294	VanW like protein
BF89_RS10645	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF89_RS10645	PF01447	Thermolysin metallopeptidase, catalytic domain
BF89_RS10645	PF03413	Peptidase propeptide and YPEB domain
BF89_RS10645	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF89_RS10655	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
BF89_RS10655	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
BF89_RS10655	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
BF89_RS10660	PF00403	Heavy-metal-associated domain
BF89_RS10665	PF01022	Bacterial regulatory protein, arsR family
BF89_RS10670	PF13520	Amino acid permease
BF89_RS10675	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF89_RS10675	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BF89_RS10685	PF07849	Protein of unknown function (DUF1641)
BF89_RS10690	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
BF89_RS10690	PF00384	Molybdopterin oxidoreductase
BF89_RS10690	PF00037	4Fe-4S binding domain
BF89_RS10690	PF01568	Molydopterin dinucleotide binding domain
BF89_RS10690	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BF89_RS10695	PF02634	FdhD/NarQ family
BF89_RS10700	PF13508	Acetyltransferase (GNAT) domain
BF89_RS10700	PF00583	Acetyltransferase (GNAT) family
BF89_RS10710	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS10710	PF00072	Response regulator receiver domain
BF89_RS10715	PF00672	HAMP domain
BF89_RS10715	PF00989	PAS fold
BF89_RS10715	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS10715	PF18698	Histidine kinase sensor domain
BF89_RS10715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS10725	PF00155	Aminotransferase class I and II
BF89_RS10725	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS10730	PF00892	EamA-like transporter family
BF89_RS10740	PF00390	Malic enzyme, N-terminal domain
BF89_RS10740	PF03949	Malic enzyme, NAD binding domain
BF89_RS10745	PF03390	2-hydroxycarboxylate transporter family
BF89_RS10750	PF00072	Response regulator receiver domain
BF89_RS10755	PF17203	Single cache domain 3
BF89_RS10755	PF00989	PAS fold
BF89_RS10755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS10755	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF89_RS10760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS10760	PF02743	Cache domain
BF89_RS10760	PF00672	HAMP domain
BF89_RS10765	PF13529	Peptidase_C39 like family
BF89_RS10775	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS10775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS10780	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS10780	PF00072	Response regulator receiver domain
BF89_RS10785	PF00149	Calcineurin-like phosphoesterase
BF89_RS10795	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10800	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS10805	PF17912	MalK OB fold domain
BF89_RS10805	PF00005	ABC transporter
BF89_RS10810	PF04309	Glycerol-3-phosphate responsive antiterminator
BF89_RS10830	PF03600	Citrate transporter
BF89_RS10835	PF12431	Transcriptional regulator 
BF89_RS10835	PF00072	Response regulator receiver domain
BF89_RS10835	PF08279	HTH domain
BF89_RS10840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS10840	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF89_RS10840	PF00989	PAS fold
BF89_RS10840	PF17203	Single cache domain 3
BF89_RS10845	PF00672	HAMP domain
BF89_RS10845	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS10845	PF02743	Cache domain
BF89_RS10850	PF01145	SPFH domain / Band 7 family
BF89_RS10850	PF15975	Flotillin
BF89_RS10860	PF08453	Peptidase family M9 N-terminal
BF89_RS10860	PF01752	Collagenase
BF89_RS10860	PF18496	Collagenase G catalytic helper subdomain
BF89_RS10865	PF02028	BCCT, betaine/carnitine/choline family transporter
BF89_RS10880	PF04285	Protein of unknown function (DUF444)
BF89_RS10890	PF08298	PrkA AAA domain
BF89_RS10890	PF06798	PrkA serine protein kinase C-terminal domain
BF89_RS10900	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS10900	PF03707	Bacterial signalling protein N terminal repeat
BF89_RS10900	PF00563	EAL domain
BF89_RS10905	PF00588	SpoU rRNA Methylase family
BF89_RS10910	PF12671	Putative amidase domain
BF89_RS10915	PF08331	Domain of unknown function (DUF1730)
BF89_RS10925	PF13462	Thioredoxin
BF89_RS10930	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS10930	PF00912	Transglycosylase
BF89_RS10935	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS10935	PF00293	NUDIX domain
BF89_RS10940	PF01709	Transcriptional regulator
BF89_RS11040	PF11023	Zinc-ribbon containing domain
BF89_RS11045	PF01475	Ferric uptake regulator family
BF89_RS11050	PF00578	AhpC/TSA family
BF89_RS11055	PF07885	Ion channel
BF89_RS11070	PF00005	ABC transporter
BF89_RS11075	PF00202	Aminotransferase class-III
BF89_RS11080	PF00310	Glutamine amidotransferases class-II
BF89_RS11080	PF04898	Glutamate synthase central domain
BF89_RS11080	PF01645	Conserved region in glutamate synthase
BF89_RS11080	PF01493	GXGXG motif
BF89_RS11085	PF06081	Aromatic acid exporter family member 1
BF89_RS11090	PF00005	ABC transporter
BF89_RS11090	PF00664	ABC transporter transmembrane region
BF89_RS11095	PF04167	Protein of unknown function (DUF402)
BF89_RS11100	PF14182	YgaB-like protein
BF89_RS11105	PF04259	Small, acid-soluble spore protein, gamma-type 
BF89_RS11115	PF14815	NUDIX domain
BF89_RS11115	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF89_RS11120	PF04307	LexA-binding, inner membrane-associated putative hydrolase
BF89_RS11125	PF14043	WVELL protein
BF89_RS11130	PF08176	Small acid-soluble spore protein K family
BF89_RS11145	PF02631	RecX family
BF89_RS11150	PF01370	NAD dependent epimerase/dehydratase family
BF89_RS11150	PF08338	Domain of unknown function (DUF1731)
BF89_RS11155	PF01979	Amidohydrolase family
BF89_RS11170	PF04101	Glycosyltransferase family 28 C-terminal domain
BF89_RS11170	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
BF89_RS11175	PF04055	Radical SAM superfamily
BF89_RS11180	PF02901	Pyruvate formate lyase-like
BF89_RS11180	PF01228	Glycine radical
BF89_RS11190	PF00535	Glycosyl transferase family 2
BF89_RS11195	PF02911	Formyl transferase, C-terminal domain
BF89_RS11195	PF01370	NAD dependent epimerase/dehydratase family
BF89_RS11195	PF00551	Formyl transferase
BF89_RS11200	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF89_RS11200	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF89_RS11200	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF89_RS11205	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF89_RS11205	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF89_RS11205	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF89_RS11210	PF00535	Glycosyl transferase family 2
BF89_RS11225	PF00144	Beta-lactamase
BF89_RS11230	PF02378	Phosphotransferase system, EIIC 
BF89_RS11230	PF00367	phosphotransferase system, EIIB
BF89_RS11235	PF04960	Glutaminase
BF89_RS11265	PF07687	Peptidase dimerisation domain
BF89_RS11265	PF01546	Peptidase family M20/M25/M40
BF89_RS11270	PF00324	Amino acid permease
BF89_RS11280	PF00158	Sigma-54 interaction domain
BF89_RS11280	PF02954	Bacterial regulatory protein, Fis family
BF89_RS11280	PF13426	PAS domain
BF89_RS11290	PF01416	tRNA pseudouridine synthase
BF89_RS11300	PF01183	Glycosyl hydrolases family 25
BF89_RS11410	PF00589	Phage integrase family
BF89_RS11415	PF00589	Phage integrase family
BF89_RS11510	PF07319	Primosomal protein DnaI N-terminus
BF89_RS11510	PF01695	IstB-like ATP binding protein
BF89_RS11545	PF01381	Helix-turn-helix
BF89_RS11560	PF01381	Helix-turn-helix
BF89_RS11565	PF00589	Phage integrase family
BF89_RS11565	PF14659	Phage integrase, N-terminal SAM-like domain
BF89_RS11570	PF01938	TRAM domain
BF89_RS11570	PF05958	tRNA (Uracil-5-)-methyltransferase
BF89_RS11575	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF89_RS11585	PF01522	Polysaccharide deacetylase
BF89_RS11590	PF05683	Fumarase C-terminus
BF89_RS11590	PF05681	Fumarate hydratase (Fumerase)
BF89_RS11600	PF04055	Radical SAM superfamily
BF89_RS11600	PF08756	YfkB-like domain
BF89_RS11605	PF14167	YfkD-like protein
BF89_RS11610	PF01699	Sodium/calcium exchanger protein
BF89_RS11615	PF16242	Pyridoxamine 5'-phosphate oxidase like
BF89_RS11630	PF09335	SNARE associated Golgi protein
BF89_RS11650	PF00892	EamA-like transporter family
BF89_RS11660	PF03631	Virulence factor BrkB
BF89_RS11670	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF89_RS11675	PF06569	Protein of unknown function (DUF1128)
BF89_RS11680	PF00690	Cation transporter/ATPase, N-terminus
BF89_RS11680	PF00689	Cation transporting ATPase, C-terminus
BF89_RS11685	PF05816	Toxic anion resistance protein (TelA)
BF89_RS11690	PF14266	Putative component of 'biosynthetic module'
BF89_RS11695	PF03741	Integral membrane protein TerC family
BF89_RS11700	PF02342	TerD domain
BF89_RS11705	PF02342	TerD domain
BF89_RS11710	PF02342	TerD domain
BF89_RS11715	PF00480	ROK family
BF89_RS11725	PF09180	Prolyl-tRNA synthetase, C-terminal
BF89_RS11725	PF03129	Anticodon binding domain
BF89_RS11725	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS11740	PF11700	Vacuole effluxer Atg22 like
BF89_RS11760	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS11760	PF08360	QacR-like protein, C-terminal region
BF89_RS11785	PF12848	ABC transporter
BF89_RS11785	PF00005	ABC transporter
BF89_RS11790	PF00005	ABC transporter
BF89_RS11800	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS11805	PF01910	Thiamine-binding protein
BF89_RS11810	PF00672	HAMP domain
BF89_RS11810	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS11815	PF03605	Anaerobic c4-dicarboxylate membrane transporter
BF89_RS11820	PF02581	Thiamine monophosphate synthase
BF89_RS11825	PF02110	Hydroxyethylthiazole kinase family
BF89_RS11830	PF01751	Toprim domain
BF89_RS11830	PF01131	DNA topoisomerase
BF89_RS11835	PF01061	ABC-2 type transporter
BF89_RS11840	PF03372	Endonuclease/Exonuclease/phosphatase family
BF89_RS11845	PF00367	phosphotransferase system, EIIB
BF89_RS11845	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF89_RS11845	PF02378	Phosphotransferase system, EIIC 
BF89_RS11850	PF00128	Alpha amylase, catalytic domain
BF89_RS11850	PF16657	Maltogenic Amylase, C-terminal domain
BF89_RS11855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS11855	PF00672	HAMP domain
BF89_RS11855	PF12729	Four helix bundle sensory module for signal transduction
BF89_RS11860	PF12729	Four helix bundle sensory module for signal transduction
BF89_RS11860	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS11860	PF00672	HAMP domain
BF89_RS11865	PF00005	ABC transporter
BF89_RS11870	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF89_RS11875	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS11885	PF00355	Rieske [2Fe-2S] domain
BF89_RS11885	PF01266	FAD dependent oxidoreductase
BF89_RS11890	PF07690	Major Facilitator Superfamily
BF89_RS11895	PF10127	RNA repair pathway DNA polymerase beta family
BF89_RS11915	PF13426	PAS domain
BF89_RS11915	PF13188	PAS domain
BF89_RS11915	PF00989	PAS fold
BF89_RS11915	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS11915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS11950	PF12728	Helix-turn-helix domain
BF89_RS11965	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS11970	PF01497	Periplasmic binding protein
BF89_RS11975	PF01032	FecCD transport family
BF89_RS11980	PF01032	FecCD transport family
BF89_RS11985	PF00596	Class II Aldolase and Adducin N-terminal domain
BF89_RS11990	PF01008	Initiation factor 2 subunit family
BF89_RS11995	PF01636	Phosphotransferase enzyme family
BF89_RS12000	PF00578	AhpC/TSA family
BF89_RS12005	PF13192	Thioredoxin domain
BF89_RS12005	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS12015	PF07687	Peptidase dimerisation domain
BF89_RS12015	PF01546	Peptidase family M20/M25/M40
BF89_RS12020	PF03553	Na+/H+ antiporter family
BF89_RS12030	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF89_RS12030	PF13378	Enolase C-terminal domain-like
BF89_RS12045	PF07308	Protein of unknown function (DUF1456)
BF89_RS12055	PF01207	Dihydrouridine synthase (Dus)
BF89_RS12060	PF05958	tRNA (Uracil-5-)-methyltransferase
BF89_RS12060	PF01938	TRAM domain
BF89_RS12060	PF02475	Met-10+ like-protein
BF89_RS12065	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS12065	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS12065	PF07670	Nucleoside recognition
BF89_RS12080	PF02073	Thermophilic metalloprotease (M29)
BF89_RS12085	PF00893	Small Multidrug Resistance protein
BF89_RS12090	PF00171	Aldehyde dehydrogenase family
BF89_RS12095	PF00158	Sigma-54 interaction domain
BF89_RS12100	PF00202	Aminotransferase class-III
BF89_RS12105	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS12110	PF00781	Diacylglycerol kinase catalytic domain
BF89_RS12115	PF02934	GatB/GatE catalytic domain
BF89_RS12115	PF02637	GatB domain
BF89_RS12120	PF01425	Amidase
BF89_RS12125	PF02686	Glu-tRNAGln amidotransferase C subunit
BF89_RS12135	PF01047	MarR family
BF89_RS12155	PF03180	NLPA lipoprotein
BF89_RS12160	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12165	PF09383	NIL domain
BF89_RS12165	PF00005	ABC transporter
BF89_RS12170	PF00857	Isochorismatase family
BF89_RS12180	PF00171	Aldehyde dehydrogenase family
BF89_RS12185	PF01925	Sulfite exporter TauE/SafE
BF89_RS12190	PF07537	CamS sex pheromone cAM373 precursor
BF89_RS12195	PF01653	NAD-dependent DNA ligase adenylation domain
BF89_RS12195	PF03120	NAD-dependent DNA ligase OB-fold domain
BF89_RS12195	PF12826	Helix-hairpin-helix motif
BF89_RS12195	PF00533	BRCA1 C Terminus (BRCT) domain
BF89_RS12195	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
BF89_RS12200	PF13361	UvrD-like helicase C-terminal domain
BF89_RS12200	PF00580	UvrD/REP helicase N-terminal domain
BF89_RS12205	PF01884	PcrB family
BF89_RS12225	PF02844	Phosphoribosylglycinamide synthetase, N domain
BF89_RS12225	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
BF89_RS12225	PF02843	Phosphoribosylglycinamide synthetase, C domain
BF89_RS12230	PF01808	AICARFT/IMPCHase bienzyme
BF89_RS12230	PF02142	MGS-like domain
BF89_RS12235	PF00551	Formyl transferase
BF89_RS12240	PF00586	AIR synthase related protein, N-terminal domain
BF89_RS12240	PF02769	AIR synthase related protein, C-terminal domain
BF89_RS12245	PF00156	Phosphoribosyl transferase domain
BF89_RS12250	PF02769	AIR synthase related protein, C-terminal domain
BF89_RS12250	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
BF89_RS12250	PF00586	AIR synthase related protein, N-terminal domain
BF89_RS12260	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
BF89_RS12265	PF01259	SAICAR synthetase
BF89_RS12270	PF10397	Adenylosuccinate lyase C-terminus
BF89_RS12270	PF00206	Lyase
BF89_RS12275	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
BF89_RS12275	PF02222	ATP-grasp domain
BF89_RS12280	PF00731	AIR carboxylase
BF89_RS12305	PF00072	Response regulator receiver domain
BF89_RS12305	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS12310	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS12310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS12315	PF00005	ABC transporter
BF89_RS12325	PF02673	Bacitracin resistance protein BacA
BF89_RS12345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS12345	PF16736	Single Cache-like 
BF89_RS12345	PF00989	PAS fold
BF89_RS12345	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS12350	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS12350	PF00072	Response regulator receiver domain
BF89_RS12355	PF00860	Permease family
BF89_RS12360	PF00117	Glutamine amidotransferase class-I
BF89_RS12360	PF00958	GMP synthase C terminal domain
BF89_RS12360	PF02540	NAD synthase
BF89_RS12365	PF00118	TCP-1/cpn60 chaperonin family
BF89_RS12370	PF00166	Chaperonin 10 Kd subunit
BF89_RS12375	PF02517	CPBP intramembrane metalloprotease
BF89_RS12385	PF06971	Putative DNA-binding protein N-terminus
BF89_RS12385	PF02629	CoA binding domain
BF89_RS12390	PF00005	ABC transporter
BF89_RS12390	PF16326	ABC transporter C-terminal domain
BF89_RS12390	PF12848	ABC transporter
BF89_RS12395	PF00814	Glycoprotease family
BF89_RS12400	PF00583	Acetyltransferase (GNAT) family
BF89_RS12405	PF00814	Glycoprotease family
BF89_RS12410	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
BF89_RS12495	PF10263	SprT-like family
BF89_RS12495	PF17283	SprT-like zinc ribbon domain
BF89_RS12505	PF16921	Tex protein YqgF-like domain
BF89_RS12505	PF09371	Tex-like protein N-terminal domain
BF89_RS12505	PF17674	HHH domain
BF89_RS12505	PF00575	S1 RNA binding domain
BF89_RS12510	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BF89_RS12515	PF01402	Ribbon-helix-helix protein, copG family
BF89_RS12520	PF00842	Alanine racemase, C-terminal domain
BF89_RS12520	PF01168	Alanine racemase, N-terminal domain
BF89_RS12530	PF01648	4'-phosphopantetheinyl transferase superfamily
BF89_RS12535	PF01694	Rhomboid family
BF89_RS12540	PF03851	UV-endonuclease UvdE
BF89_RS12545	PF00270	DEAD/DEAH box helicase
BF89_RS12545	PF00271	Helicase conserved C-terminal domain
BF89_RS12550	PF01225	Mur ligase family, catalytic domain
BF89_RS12550	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS12550	PF08245	Mur ligase middle domain
BF89_RS12555	PF01820	D-ala D-ala ligase N-terminus
BF89_RS12555	PF07478	D-ala D-ala ligase C-terminus
BF89_RS12560	PF07478	D-ala D-ala ligase C-terminus
BF89_RS12560	PF01820	D-ala D-ala ligase N-terminus
BF89_RS12565	PF07690	Major Facilitator Superfamily
BF89_RS12575	PF01557	Fumarylacetoacetate (FAA) hydrolase family
BF89_RS12580	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS12610	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS12610	PF00005	ABC transporter
BF89_RS12615	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS12615	PF00005	ABC transporter
BF89_RS12620	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF89_RS12620	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12625	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12630	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS12645	PF00005	ABC transporter
BF89_RS12645	PF12848	ABC transporter
BF89_RS12645	PF16326	ABC transporter C-terminal domain
BF89_RS12670	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
BF89_RS12675	PF01026	TatD related DNase
BF89_RS12690	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS12690	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS12700	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF89_RS12700	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS12710	PF01553	Acyltransferase
BF89_RS12715	PF14142	YrzO-like protein
BF89_RS12720	PF00892	EamA-like transporter family
BF89_RS12725	PF03466	LysR substrate binding domain
BF89_RS12725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS12740	PF12728	Helix-turn-helix domain
BF89_RS12740	PF12727	PBP superfamily domain
BF89_RS12750	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12755	PF06800	Sugar transport protein
BF89_RS12760	PF04973	Nicotinamide mononucleotide transporter
BF89_RS12770	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF89_RS12770	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF89_RS12775	PF00248	Aldo/keto reductase family
BF89_RS12780	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS12785	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS12800	PF12833	Helix-turn-helix domain
BF89_RS12810	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS12815	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS12815	PF00005	ABC transporter
BF89_RS12820	PF00005	ABC transporter
BF89_RS12820	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS12825	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12825	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF89_RS12830	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12845	PF07690	Major Facilitator Superfamily
BF89_RS12855	PF07690	Major Facilitator Superfamily
BF89_RS12870	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS12870	PF00107	Zinc-binding dehydrogenase
BF89_RS12875	PF03180	NLPA lipoprotein
BF89_RS12880	PF09383	NIL domain
BF89_RS12880	PF00005	ABC transporter
BF89_RS12885	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS12920	PF07676	WD40-like Beta Propeller Repeat
BF89_RS12920	PF00326	Prolyl oligopeptidase family
BF89_RS12925	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BF89_RS12925	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF89_RS12930	PF02447	GntP family permease
BF89_RS12935	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS12935	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS12940	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS12940	PF07729	FCD domain
BF89_RS12945	PF00561	alpha/beta hydrolase fold
BF89_RS12950	PF01380	SIS domain
BF89_RS12960	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BF89_RS12960	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BF89_RS12960	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BF89_RS12960	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BF89_RS12965	PF07949	YbbR-like protein
BF89_RS12970	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF89_RS12975	PF00491	Arginase family
BF89_RS12980	PF02595	Glycerate kinase family
BF89_RS12985	PF02595	Glycerate kinase family
BF89_RS13055	PF01522	Polysaccharide deacetylase
BF89_RS13060	PF14089	KinB-signalling pathway activation in sporulation
BF89_RS13065	PF17898	Spore germination GerD central core domain
BF89_RS13070	PF10609	NUBPL iron-transfer P-loop NTPase
BF89_RS13075	PF01520	N-acetylmuramoyl-L-alanine amidase
BF89_RS13085	PF00380	Ribosomal protein S9/S16
BF89_RS13090	PF00572	Ribosomal protein L13
BF89_RS13095	PF01416	tRNA pseudouridine synthase
BF89_RS13100	PF02361	Cobalt transport protein
BF89_RS13105	PF00005	ABC transporter
BF89_RS13110	PF00005	ABC transporter
BF89_RS13115	PF01196	Ribosomal protein L17
BF89_RS13120	PF01000	RNA polymerase Rpb3/RpoA insert domain
BF89_RS13120	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
BF89_RS13120	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
BF89_RS13125	PF00411	Ribosomal protein S11
BF89_RS13130	PF00416	Ribosomal protein S13/S18
BF89_RS13135	PF00444	Ribosomal protein L36
BF89_RS13140	PF01176	Translation initiation factor 1A / IF-1
BF89_RS13145	PF00557	Metallopeptidase family M24
BF89_RS13150	PF05191	Adenylate kinase, active site lid
BF89_RS13155	PF00344	SecY translocase
BF89_RS13160	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
BF89_RS13165	PF00327	Ribosomal protein L30p/L7e
BF89_RS13170	PF03719	Ribosomal protein S5, C-terminal domain
BF89_RS13170	PF00333	Ribosomal protein S5, N-terminal domain
BF89_RS13175	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
BF89_RS13180	PF00347	Ribosomal protein L6
BF89_RS13185	PF00410	Ribosomal protein S8
BF89_RS13190	PF00253	Ribosomal protein S14p/S29e
BF89_RS13195	PF00673	ribosomal L5P family C-terminus
BF89_RS13195	PF00281	Ribosomal protein L5
BF89_RS13200	PF00467	KOW motif
BF89_RS13200	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
BF89_RS13205	PF00238	Ribosomal protein L14p/L23e
BF89_RS13210	PF00366	Ribosomal protein S17
BF89_RS13215	PF00831	Ribosomal L29 protein
BF89_RS13220	PF00252	Ribosomal protein L16p/L10e
BF89_RS13225	PF00189	Ribosomal protein S3, C-terminal domain
BF89_RS13225	PF07650	KH domain
BF89_RS13230	PF00237	Ribosomal protein L22p/L17e
BF89_RS13235	PF00203	Ribosomal protein S19
BF89_RS13240	PF00181	Ribosomal Proteins L2, RNA binding domain
BF89_RS13240	PF03947	Ribosomal Proteins L2, C-terminal domain
BF89_RS13245	PF00276	Ribosomal protein L23
BF89_RS13250	PF00573	Ribosomal protein L4/L1 family
BF89_RS13255	PF00297	Ribosomal protein L3
BF89_RS13260	PF00338	Ribosomal protein S10p/S20e
BF89_RS13265	PF03144	Elongation factor Tu domain 2
BF89_RS13265	PF03143	Elongation factor Tu C-terminal domain
BF89_RS13265	PF00009	Elongation factor Tu GTP binding domain
BF89_RS13270	PF00009	Elongation factor Tu GTP binding domain
BF89_RS13270	PF03144	Elongation factor Tu domain 2
BF89_RS13270	PF03764	Elongation factor G, domain IV
BF89_RS13270	PF14492	Elongation Factor G, domain II
BF89_RS13270	PF00679	Elongation factor G C-terminus
BF89_RS13275	PF00177	Ribosomal protein S7p/S5e
BF89_RS13280	PF00164	Ribosomal protein S12/S23
BF89_RS13285	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BF89_RS13290	PF04998	RNA polymerase Rpb1, domain 5
BF89_RS13290	PF05000	RNA polymerase Rpb1, domain 4
BF89_RS13290	PF04983	RNA polymerase Rpb1, domain 3
BF89_RS13290	PF00623	RNA polymerase Rpb1, domain 2
BF89_RS13290	PF04997	RNA polymerase Rpb1, domain 1
BF89_RS13295	PF10385	RNA polymerase beta subunit external 1 domain
BF89_RS13295	PF04561	RNA polymerase Rpb2, domain 2
BF89_RS13295	PF04563	RNA polymerase beta subunit
BF89_RS13295	PF00562	RNA polymerase Rpb2, domain 6
BF89_RS13295	PF04560	RNA polymerase Rpb2, domain 7
BF89_RS13295	PF04565	RNA polymerase Rpb2, domain 3
BF89_RS13300	PF05175	Methyltransferase small domain
BF89_RS13305	PF00542	Ribosomal protein L7/L12 C-terminal domain
BF89_RS13305	PF16320	Ribosomal protein L7/L12 dimerisation domain
BF89_RS13310	PF00466	Ribosomal protein L10
BF89_RS13315	PF00687	Ribosomal protein L1p/L10e family
BF89_RS13320	PF03946	Ribosomal protein L11, N-terminal domain
BF89_RS13320	PF00298	Ribosomal protein L11, RNA binding domain
BF89_RS13325	PF00467	KOW motif
BF89_RS13325	PF02357	Transcription termination factor nusG
BF89_RS13330	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
BF89_RS13335	PF00471	Ribosomal protein L33
BF89_RS13340	PF08281	Sigma-70, region 4
BF89_RS13340	PF04542	Sigma-70 region 2 
BF89_RS13345	PF05991	YacP-like NYN domain
BF89_RS13350	PF00588	SpoU rRNA Methylase family
BF89_RS13350	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BF89_RS13355	PF00636	Ribonuclease III domain
BF89_RS13360	PF01406	tRNA synthetases class I (C) catalytic domain
BF89_RS13360	PF09190	DALR domain
BF89_RS13365	PF06426	Serine acetyltransferase, N-terminal 
BF89_RS13365	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS13370	PF00749	tRNA synthetases class I (E and Q), catalytic domain
BF89_RS13375	PF02542	YgbB family
BF89_RS13380	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
BF89_RS13390	PF10635	DisA bacterial checkpoint controller linker region 
BF89_RS13390	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF89_RS13395	PF18073	Rubredoxin metal binding domain
BF89_RS13400	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF89_RS13400	PF02861	Clp amino terminal domain, pathogenicity island component
BF89_RS13400	PF17871	AAA lid domain
BF89_RS13400	PF07724	AAA domain (Cdc48 subfamily)
BF89_RS13400	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS13405	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
BF89_RS13410	PF02151	UvrB/uvrC motif
BF89_RS13415	PF05848	CtsR N-terminal HTH domain
BF89_RS13415	PF17727	CtsR C-terminal dimerization domain
BF89_RS13435	PF01336	OB-fold nucleic acid binding domain
BF89_RS13435	PF00152	tRNA synthetases class II (D, K and N) 
BF89_RS13440	PF01207	Dihydrouridine synthase (Dus)
BF89_RS13445	PF01381	Helix-turn-helix
BF89_RS13450	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BF89_RS13455	PF02152	Dihydroneopterin aldolase
BF89_RS13460	PF00809	Pterin binding enzyme
BF89_RS13465	PF01063	Amino-transferase class IV
BF89_RS13470	PF00117	Glutamine amidotransferase class-I
BF89_RS13475	PF00425	chorismate binding enzyme
BF89_RS13475	PF04715	Anthranilate synthase component I, N terminal region
BF89_RS13480	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS13485	PF01430	Hsp33 protein
BF89_RS13490	PF03309	Type III pantothenate kinase
BF89_RS13495	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS13495	PF06480	FtsH Extracellular
BF89_RS13495	PF01434	Peptidase family M41
BF89_RS13495	PF17862	AAA+ lid domain
BF89_RS13500	PF00156	Phosphoribosyl transferase domain
BF89_RS13505	PF11734	TilS substrate C-terminal domain
BF89_RS13505	PF01171	PP-loop family
BF89_RS13505	PF09179	TilS substrate binding domain
BF89_RS13510	PF07228	Stage II sporulation protein E (SpoIIE)
BF89_RS13525	PF00575	S1 RNA binding domain
BF89_RS13535	PF09578	Spore cortex protein YabQ (Spore_YabQ)
BF89_RS13540	PF07873	YabP family
BF89_RS13545	PF01479	S4 domain
BF89_RS13550	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF89_RS13550	PF03819	MazG nucleotide pyrophosphohydrolase domain
BF89_RS13555	PF01943	Polysaccharide biosynthesis protein
BF89_RS13555	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS13560	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF89_RS13560	PF15714	Stage V sporulation protein T C-terminal, transcription factor
BF89_RS13565	PF02559	CarD-like/TRCF domain
BF89_RS13565	PF00270	DEAD/DEAH box helicase
BF89_RS13565	PF03461	TRCF domain
BF89_RS13565	PF00271	Helicase conserved C-terminal domain
BF89_RS13565	PF17757	UvrB interaction domain
BF89_RS13575	PF01195	Peptidyl-tRNA hydrolase
BF89_RS13580	PF14572	Phosphoribosyl synthetase-associated domain
BF89_RS13580	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
BF89_RS13585	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS13585	PF00483	Nucleotidyl transferase
BF89_RS13590	PF04026	SpoVG
BF89_RS13595	PF01042	Endoribonuclease L-PSP
BF89_RS13600	PF09182	Bacterial purine repressor, N-terminal
BF89_RS13600	PF00156	Phosphoribosyl transferase domain
BF89_RS13605	PF08544	GHMP kinases C terminal 
BF89_RS13605	PF00288	GHMP kinases N terminal domain
BF89_RS13610	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS13615	PF06257	Biofilm formation stimulator VEG
BF89_RS13620	PF05582	YabG peptidase U57
BF89_RS13625	PF00398	Ribosomal RNA adenine dimethylase
BF89_RS13630	PF13662	Toprim domain
BF89_RS13630	PF13331	Domain of unknown function (DUF4093)
BF89_RS13635	PF01026	TatD related DNase
BF89_RS13640	PF01588	Putative tRNA binding domain
BF89_RS13640	PF08264	Anticodon-binding domain of tRNA
BF89_RS13640	PF09334	tRNA synthetases class I (M)
BF89_RS13645	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
BF89_RS13645	PF18277	AbrB C-terminal domain
BF89_RS13650	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
BF89_RS13655	PF01541	GIY-YIG catalytic domain
BF89_RS13660	PF05175	Methyltransferase small domain
BF89_RS13665	PF06156	Initiation control protein YabA
BF89_RS13670	PF04468	PSP1 C-terminal conserved region
BF89_RS13675	PF09115	DNA polymerase III, delta subunit, C terminal
BF89_RS13680	PF02223	Thymidylate kinase
BF89_RS13685	PF01276	Orn/Lys/Arg decarboxylase, major domain
BF89_RS13685	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BF89_RS13720	PF07441	SigmaK-factor processing regulatory protein BofA
BF89_RS13725	PF10704	Protein of unknown function (DUF2508)
BF89_RS13730	PF02132	RecR protein
BF89_RS13730	PF13662	Toprim domain
BF89_RS13735	PF02575	YbaB/EbfC DNA-binding family
BF89_RS13740	PF12169	DNA polymerase III subunits gamma and tau domain III
BF89_RS13745	PF14437	MafB19-like deaminase
BF89_RS13755	PF00857	Isochorismatase family
BF89_RS13760	PF01712	Deoxynucleoside kinase
BF89_RS13765	PF01712	Deoxynucleoside kinase
BF89_RS13780	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS13780	PF02403	Seryl-tRNA synthetase N-terminal domain
BF89_RS13785	PF01174	SNO glutamine amidotransferase family
BF89_RS13790	PF01680	SOR/SNZ family
BF89_RS13795	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS13795	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS13800	PF00571	CBS domain
BF89_RS13800	PF00478	IMP dehydrogenase / GMP reductase domain
BF89_RS13805	PF14175	YaaC-like Protein
BF89_RS13835	PF03989	DNA gyrase C-terminal domain, beta-propeller
BF89_RS13835	PF00521	DNA gyrase/topoisomerase IV, subunit A
BF89_RS13840	PF01751	Toprim domain
BF89_RS13840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS13840	PF00986	DNA gyrase B subunit, carboxyl terminus
BF89_RS13840	PF00204	DNA gyrase B
BF89_RS13845	PF02463	RecF/RecN/SMC N terminal domain
BF89_RS13855	PF02768	DNA polymerase III beta subunit, C-terminal domain
BF89_RS13855	PF02767	DNA polymerase III beta subunit, central domain
BF89_RS13855	PF00712	DNA polymerase III beta subunit, N-terminal domain
BF89_RS13860	PF00308	Bacterial dnaA  protein
BF89_RS13860	PF08299	Bacterial dnaA protein helix-turn-helix
BF89_RS13860	PF11638	DnaA N-terminal domain
BF89_RS13865	PF00468	Ribosomal protein L34
BF89_RS13870	PF00825	Ribonuclease P
BF89_RS13875	PF02096	60Kd inner membrane protein
BF89_RS13880	PF01424	R3H domain
BF89_RS13880	PF14804	Jag N-terminus
BF89_RS13885	PF10396	GTP-binding protein TrmE N-terminus
BF89_RS13885	PF12631	MnmE helical domain
BF89_RS13885	PF01926	50S ribosome-binding GTPase
BF89_RS13890	PF01134	Glucose inhibited division protein A
BF89_RS13890	PF13932	GidA associated domain
BF89_RS13895	PF02527	rRNA small subunit methyltransferase G
BF89_RS13900	PF17762	HTH domain found in ParB protein
BF89_RS13900	PF02195	ParB-like nuclease domain
BF89_RS13905	PF13614	AAA domain
BF89_RS13910	PF17762	HTH domain found in ParB protein
BF89_RS13910	PF02195	ParB-like nuclease domain
BF89_RS13915	PF06866	Protein of unknown function (DUF1256)
BF89_RS13920	PF00924	Mechanosensitive ion channel
BF89_RS13925	PF06107	Bacterial protein of unknown function (DUF951)
BF89_RS13930	PF06071	Protein of unknown function (DUF933)
BF89_RS13930	PF01926	50S ribosome-binding GTPase
BF89_RS13935	PF01250	Ribosomal protein S6
BF89_RS13940	PF00436	Single-strand binding protein family
BF89_RS13945	PF01084	Ribosomal protein S18
BF89_RS13950	PF09991	Predicted membrane protein (DUF2232)
BF89_RS13955	PF02272	DHHA1 domain
BF89_RS13955	PF01368	DHH family
BF89_RS13960	PF01281	Ribosomal protein L9, N-terminal domain
BF89_RS13960	PF03948	Ribosomal protein L9, C-terminal domain
BF89_RS13965	PF00772	DnaB-like helicase N terminal domain
BF89_RS13965	PF03796	DnaB-like helicase C terminal domain
BF89_RS13970	PF00709	Adenylosuccinate synthetase
BF89_RS13995	PF00072	Response regulator receiver domain
BF89_RS13995	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS14000	PF00672	HAMP domain
BF89_RS14000	PF13426	PAS domain
BF89_RS14000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS14000	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS14005	PF07435	YycH protein
BF89_RS14010	PF09648	YycH protein
BF89_RS14015	PF00753	Metallo-beta-lactamase superfamily
BF89_RS14020	PF13180	PDZ domain
BF89_RS14030	PF02590	Predicted SPOUT methyltransferase
BF89_RS14040	PF01432	Peptidase family M3
BF89_RS14040	PF08439	Oligopeptidase F
BF89_RS14045	PF00478	IMP dehydrogenase / GMP reductase domain
BF89_RS14055	PF00271	Helicase conserved C-terminal domain
BF89_RS14055	PF00270	DEAD/DEAH box helicase
BF89_RS14055	PF03880	DbpA RNA binding domain   
BF89_RS14065	PF03006	Haemolysin-III related
BF89_RS14070	PF16363	GDP-mannose 4,6 dehydratase
BF89_RS14080	PF02293	AmiS/UreI family transporter
BF89_RS14090	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF89_RS14090	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF89_RS14095	PF02898	Nitric oxide synthase, oxygenase domain
BF89_RS14100	PF02028	BCCT, betaine/carnitine/choline family transporter
BF89_RS14105	PF07690	Major Facilitator Superfamily
BF89_RS14110	PF07694	5TMR of 5TMR-LYT
BF89_RS14110	PF13492	GAF domain
BF89_RS14110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS14110	PF06580	Histidine kinase
BF89_RS14115	PF04397	LytTr DNA-binding domain
BF89_RS14115	PF00072	Response regulator receiver domain
BF89_RS14120	PF03788	LrgA family
BF89_RS14125	PF04172	LrgB-like family 
BF89_RS14130	PF01594	AI-2E family transporter
BF89_RS14135	PF01625	Peptide methionine sulfoxide reductase
BF89_RS14135	PF01641	SelR domain
BF89_RS14140	PF00873	AcrB/AcrD/AcrF family
BF89_RS14145	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS14150	PF00535	Glycosyl transferase family 2
BF89_RS14175	PF00005	ABC transporter
BF89_RS14175	PF12848	ABC transporter
BF89_RS14180	PF00535	Glycosyl transferase family 2
BF89_RS14190	PF03061	Thioesterase superfamily
BF89_RS14205	PF03458	UPF0126 domain
BF89_RS14220	PF03808	Glycosyl transferase WecB/TagA/CpsF family
BF89_RS14225	PF07690	Major Facilitator Superfamily
BF89_RS14230	PF00072	Response regulator receiver domain
BF89_RS14230	PF04397	LytTr DNA-binding domain
BF89_RS14235	PF13722	5TM C-terminal transporter carbon starvation CstA
BF89_RS14235	PF02554	Carbon starvation protein CstA
BF89_RS14240	PF04328	Selenoprotein, putative 
BF89_RS14245	PF07694	5TMR of 5TMR-LYT
BF89_RS14245	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS14250	PF08543	Phosphomethylpyrimidine kinase
BF89_RS14260	PF00072	Response regulator receiver domain
BF89_RS14260	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS14265	PF02525	Flavodoxin-like fold
BF89_RS14270	PF00027	Cyclic nucleotide-binding domain
BF89_RS14275	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS14285	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF89_RS14290	PF04204	Homoserine O-succinyltransferase 
BF89_RS14295	PF03447	Homoserine dehydrogenase, NAD binding domain
BF89_RS14295	PF01842	ACT domain
BF89_RS14295	PF00742	Homoserine dehydrogenase
BF89_RS14305	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS14305	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF89_RS14310	PF13472	GDSL-like Lipase/Acylhydrolase family
BF89_RS14315	PF00005	ABC transporter
BF89_RS14320	PF12679	ABC-2 family transporter protein
BF89_RS14325	PF03167	Uracil DNA glycosylase superfamily
BF89_RS14330	PF12823	Domain of unknown function (DUF3817)
BF89_RS14340	PF00860	Permease family
BF89_RS14345	PF02254	TrkA-N domain
BF89_RS14345	PF07885	Ion channel
BF89_RS14355	PF04241	Protein of unknown function (DUF423)
BF89_RS14360	PF09671	Spore coat protein (Spore_GerQ)
BF89_RS14365	PF07486	Cell Wall Hydrolase
BF89_RS14370	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS14370	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS14375	PF06778	Chlorite dismutase
BF89_RS14380	PF01515	Phosphate acetyl/butaryl transferase
BF89_RS14385	PF03099	Biotin/lipoate A/B protein ligase family
BF89_RS14400	PF07293	Protein of unknown function (DUF1450)
BF89_RS14405	PF01032	FecCD transport family
BF89_RS14410	PF01032	FecCD transport family
BF89_RS14415	PF00005	ABC transporter
BF89_RS14420	PF01497	Periplasmic binding protein
BF89_RS14425	PF01966	HD domain
BF89_RS14430	PF01361	Tautomerase enzyme
BF89_RS14435	PF02163	Peptidase family M50
BF89_RS14440	PF08741	YwhD family
BF89_RS14445	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS14445	PF00912	Transglycosylase
BF89_RS14450	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF89_RS14455	PF13411	MerR HTH family regulatory protein
BF89_RS14460	PF07690	Major Facilitator Superfamily
BF89_RS14465	PF17284	Spermidine synthase tetramerisation domain
BF89_RS14470	PF00491	Arginase family
BF89_RS14490	PF17676	LD-carboxypeptidase C-terminal domain
BF89_RS14490	PF02016	LD-carboxypeptidase N-terminal domain
BF89_RS14495	PF09148	Domain of unknown function (DUF1934)
BF89_RS14500	PF05746	DALR anticodon binding domain
BF89_RS14500	PF03485	Arginyl tRNA synthetase N terminal domain
BF89_RS14500	PF00750	tRNA synthetases class I (R)
BF89_RS14505	PF08281	Sigma-70, region 4
BF89_RS14505	PF04542	Sigma-70 region 2 
BF89_RS14525	PF04389	Peptidase family M28
BF89_RS14525	PF02225	PA domain
BF89_RS14530	PF02324	Glycosyl hydrolase family 70
BF89_RS14530	PF01473	Putative cell wall binding repeat
BF89_RS14540	PF00557	Metallopeptidase family M24
BF89_RS14545	PF00005	ABC transporter
BF89_RS14555	PF07730	Histidine kinase
BF89_RS14555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS14560	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS14560	PF00072	Response regulator receiver domain
BF89_RS14575	PF03707	Bacterial signalling protein N terminal repeat
BF89_RS14575	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS14575	PF00563	EAL domain
BF89_RS14580	PF03851	UV-endonuclease UvdE
BF89_RS14585	PF13091	PLD-like domain
BF89_RS14590	PF02754	Cysteine-rich domain
BF89_RS14590	PF13183	4Fe-4S dicluster domain
BF89_RS14595	PF02803	Thiolase, C-terminal domain
BF89_RS14595	PF00108	Thiolase, N-terminal domain
BF89_RS14600	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BF89_RS14600	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BF89_RS14605	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS14605	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS14605	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS14610	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS14610	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS14610	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS14620	PF05066	HB1, ASXL, restriction endonuclease HTH domain
BF89_RS14625	PF06418	CTP synthase N-terminus
BF89_RS14625	PF00117	Glutamine amidotransferase class-I
BF89_RS14630	PF10740	Domain of unknown function (DUF2529)
BF89_RS14635	PF00072	Response regulator receiver domain
BF89_RS14640	PF01116	Fructose-bisphosphate aldolase class-II
BF89_RS14645	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF89_RS14650	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BF89_RS14655	PF07498	Rho termination factor, N-terminal domain
BF89_RS14655	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF89_RS14655	PF07497	Rho termination factor, RNA-binding domain
BF89_RS14660	PF01197	Ribosomal protein L31
BF89_RS14665	PF00265	Thymidine kinase
BF89_RS14670	PF03462	PCRF domain
BF89_RS14670	PF00472	RF-1 domain
BF89_RS14675	PF13847	Methyltransferase domain
BF89_RS14675	PF17827	PrmC N-terminal domain
BF89_RS14680	PF09551	Stage II sporulation protein R (spore_II_R)
BF89_RS14690	PF03481	Putative GTP-binding controlling metal-binding
BF89_RS14690	PF01300	Telomere recombination
BF89_RS14695	PF02659	Putative manganese efflux pump
BF89_RS14705	PF01613	Flavin reductase like domain
BF89_RS14710	PF07681	DoxX
BF89_RS14715	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF89_RS14720	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF89_RS14725	PF02502	Ribose/Galactose Isomerase
BF89_RS14730	PF04260	Protein of unknown function (DUF436) 
BF89_RS14735	PF00464	Serine hydroxymethyltransferase
BF89_RS14755	PF03899	ATP synthase I chain
BF89_RS14760	PF00119	ATP synthase A chain
BF89_RS14765	PF00137	ATP synthase subunit C
BF89_RS14770	PF00430	ATP synthase B/B' CF(0)
BF89_RS14775	PF00213	ATP synthase delta (OSCP) subunit
BF89_RS14780	PF00306	ATP synthase alpha/beta chain, C terminal domain
BF89_RS14780	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF89_RS14780	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF89_RS14785	PF00231	ATP synthase
BF89_RS14790	PF02874	ATP synthase alpha/beta family, beta-barrel domain
BF89_RS14790	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
BF89_RS14795	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
BF89_RS14795	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
BF89_RS14810	PF03707	Bacterial signalling protein N terminal repeat
BF89_RS14810	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS14810	PF00563	EAL domain
BF89_RS14815	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
BF89_RS14820	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
BF89_RS14825	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
BF89_RS14830	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
BF89_RS14835	PF00146	NADH dehydrogenase
BF89_RS14845	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
BF89_RS14850	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
BF89_RS14855	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BF89_RS14855	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
BF89_RS14855	PF00361	Proton-conducting membrane transporter
BF89_RS14860	PF00361	Proton-conducting membrane transporter
BF89_RS14865	PF00361	Proton-conducting membrane transporter
BF89_RS14870	PF06612	Protein of unknown function (DUF1146)
BF89_RS14880	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF89_RS14885	PF08486	Stage II sporulation protein
BF89_RS14890	PF00005	ABC transporter
BF89_RS14895	PF04397	LytTr DNA-binding domain
BF89_RS14895	PF00072	Response regulator receiver domain
BF89_RS14900	PF00005	ABC transporter
BF89_RS14910	PF01551	Peptidase family M23
BF89_RS14925	PF12116	Stage III sporulation protein D
BF89_RS14970	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF89_RS14970	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF89_RS14970	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF89_RS14975	PF01061	ABC-2 type transporter
BF89_RS14980	PF00005	ABC transporter
BF89_RS14980	PF08239	Bacterial SH3 domain
BF89_RS14985	PF02350	UDP-N-acetylglucosamine 2-epimerase
BF89_RS14990	PF07977	FabA-like domain
BF89_RS14995	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS15000	PF16363	GDP-mannose 4,6 dehydratase
BF89_RS15005	PF00072	Response regulator receiver domain
BF89_RS15005	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS15010	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS15010	PF00989	PAS fold
BF89_RS15010	PF16736	Single Cache-like 
BF89_RS15010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS15025	PF07690	Major Facilitator Superfamily
BF89_RS15045	PF00005	ABC transporter
BF89_RS15050	PF12704	MacB-like periplasmic core domain
BF89_RS15050	PF02687	FtsX-like permease family
BF89_RS15055	PF04893	Yip1 domain
BF89_RS15060	PF04542	Sigma-70 region 2 
BF89_RS15060	PF04545	Sigma-70, region 4
BF89_RS15090	PF12419	SNF2 Helicase protein 
BF89_RS15090	PF00271	Helicase conserved C-terminal domain
BF89_RS15090	PF00176	SNF2 family N-terminal domain
BF89_RS15095	PF04434	SWIM zinc finger
BF89_RS15120	PF01476	LysM domain
BF89_RS15120	PF06725	3D domain
BF89_RS15125	PF02028	BCCT, betaine/carnitine/choline family transporter
BF89_RS15145	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS15145	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS15155	PF01063	Amino-transferase class IV
BF89_RS15160	PF00884	Sulfatase
BF89_RS15170	PF09988	Uncharacterized metal-binding protein (DUF2227)
BF89_RS15185	PF13667	ThiC-associated domain 
BF89_RS15185	PF01964	Radical SAM ThiC family
BF89_RS15190	PF02040	Arsenical pump membrane protein
BF89_RS15195	PF02322	Cytochrome bd terminal oxidase subunit II
BF89_RS15200	PF01654	Cytochrome bd terminal oxidase subunit I
BF89_RS15220	PF03466	LysR substrate binding domain
BF89_RS15220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS15230	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS15240	PF00375	Sodium:dicarboxylate symporter family
BF89_RS15245	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF89_RS15250	PF02378	Phosphotransferase system, EIIC 
BF89_RS15255	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF89_RS15260	PF02675	S-adenosylmethionine decarboxylase 
BF89_RS15270	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF89_RS15275	PF02378	Phosphotransferase system, EIIC 
BF89_RS15280	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
BF89_RS15285	PF11975	Family 4 glycosyl hydrolase C-terminal domain
BF89_RS15285	PF02056	Family 4 glycosyl hydrolase
BF89_RS15290	PF04794	YdjC-like protein
BF89_RS15295	PF02417	Chromate transporter
BF89_RS15305	PF00158	Sigma-54 interaction domain
BF89_RS15305	PF00874	PRD domain
BF89_RS15305	PF03610	PTS system fructose IIA component
BF89_RS15310	PF01522	Polysaccharide deacetylase
BF89_RS15315	PF00953	Glycosyl transferase family 4
BF89_RS15320	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
BF89_RS15320	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
BF89_RS15320	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
BF89_RS15325	PF02350	UDP-N-acetylglucosamine 2-epimerase
BF89_RS15330	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS15335	PF01205	Uncharacterized protein family UPF0029
BF89_RS15335	PF09186	Domain of unknown function (DUF1949)
BF89_RS15340	PF02645	Uncharacterised protein, DegV family COG1307
BF89_RS15350	PF01638	HxlR-like helix-turn-helix
BF89_RS15355	PF01476	LysM domain
BF89_RS15355	PF00877	NlpC/P60 family
BF89_RS15370	PF00313	'Cold-shock' DNA-binding domain
BF89_RS15375	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
BF89_RS15375	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
BF89_RS15380	PF07516	SecA Wing and Scaffold domain
BF89_RS15380	PF01043	SecA preprotein cross-linking domain
BF89_RS15380	PF07517	SecA DEAD-like domain
BF89_RS15380	PF02810	SEC-C motif
BF89_RS15385	PF00472	RF-1 domain
BF89_RS15385	PF03462	PCRF domain
BF89_RS15395	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF89_RS15400	PF00005	ABC transporter
BF89_RS15405	PF02687	FtsX-like permease family
BF89_RS15405	PF18075	FtsX extracellular domain
BF89_RS15410	PF03572	Peptidase family S41
BF89_RS15410	PF17820	PDZ domain
BF89_RS15410	PF01471	Putative peptidoglycan binding domain
BF89_RS15415	PF17820	PDZ domain
BF89_RS15420	PF00664	ABC transporter transmembrane region
BF89_RS15420	PF00005	ABC transporter
BF89_RS15425	PF01906	Putative heavy-metal-binding
BF89_RS15430	PF00005	ABC transporter
BF89_RS15430	PF12848	ABC transporter
BF89_RS15435	PF03358	NADPH-dependent FMN reductase
BF89_RS15440	PF13411	MerR HTH family regulatory protein
BF89_RS15445	PF03466	LysR substrate binding domain
BF89_RS15445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS15450	PF03601	Conserved hypothetical protein 698
BF89_RS15475	PF13411	MerR HTH family regulatory protein
BF89_RS15475	PF07739	TipAS antibiotic-recognition domain
BF89_RS15490	PF12323	Helix-turn-helix domain
BF89_RS15490	PF01385	Probable transposase
BF89_RS15490	PF07282	Putative transposase DNA-binding domain
BF89_RS15495	PF12344	Ultra-violet resistance protein B
BF89_RS15495	PF04851	Type III restriction enzyme, res subunit
BF89_RS15495	PF02151	UvrB/uvrC motif
BF89_RS15495	PF00271	Helicase conserved C-terminal domain
BF89_RS15495	PF17757	UvrB interaction domain
BF89_RS15500	PF17760	UvrA interaction domain
BF89_RS15500	PF17755	UvrA DNA-binding domain
BF89_RS15500	PF00005	ABC transporter
BF89_RS15510	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
BF89_RS15515	PF07475	HPr Serine kinase C-terminal domain
BF89_RS15515	PF02603	HPr Serine kinase N terminus
BF89_RS15520	PF01790	Prolipoprotein diacylglyceryl transferase
BF89_RS15525	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS15530	PF14602	Hexapeptide repeat of succinyl-transferase
BF89_RS15540	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS15550	PF00293	NUDIX domain
BF89_RS15555	PF03668	P-loop ATPase protein family
BF89_RS15560	PF01933	Uncharacterised protein family UPF0052
BF89_RS15565	PF02650	WhiA C-terminal HTH domain
BF89_RS15565	PF10298	WhiA N-terminal LAGLIDADG-like domain
BF89_RS15565	PF14527	WhiA LAGLIDADG-like domain
BF89_RS15570	PF00381	PTS HPr component phosphorylation site
BF89_RS15575	PF00574	Clp protease
BF89_RS15580	PF04239	Protein of unknown function (DUF421)
BF89_RS15590	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF89_RS15595	PF07451	Stage V sporulation protein AD (SpoVAD)
BF89_RS15600	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF89_RS15620	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
BF89_RS15620	PF04963	Sigma-54 factor, core binding domain
BF89_RS15620	PF04552	Sigma-54, DNA binding domain
BF89_RS15630	PF04198	Putative sugar-binding domain
BF89_RS15635	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BF89_RS15635	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BF89_RS15640	PF00162	Phosphoglycerate kinase
BF89_RS15645	PF00121	Triosephosphate isomerase
BF89_RS15650	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
BF89_RS15650	PF01676	Metalloenzyme superfamily
BF89_RS15655	PF03952	Enolase, N-terminal domain
BF89_RS15655	PF00113	Enolase, C-terminal TIM barrel domain
BF89_RS15660	PF00589	Phage integrase family
BF89_RS15660	PF02899	Phage integrase, N-terminal SAM-like domain
BF89_RS15685	PF04860	Phage portal protein
BF89_RS15775	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF89_RS15780	PF03788	LrgA family
BF89_RS15785	PF04172	LrgB-like family 
BF89_RS15790	PF03840	Preprotein translocase SecG subunit
BF89_RS15795	PF12146	Serine aminopeptidase, S33
BF89_RS15800	PF00575	S1 RNA binding domain
BF89_RS15800	PF17876	Cold shock domain
BF89_RS15800	PF08206	Ribonuclease B OB domain
BF89_RS15800	PF00773	RNB domain
BF89_RS15805	PF01668	SmpB protein
BF89_RS15810	PF00072	Response regulator receiver domain
BF89_RS15810	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS15820	PF01032	FecCD transport family
BF89_RS15825	PF01032	FecCD transport family
BF89_RS15830	PF00005	ABC transporter
BF89_RS15845	PF06146	Phosphate-starvation-inducible E
BF89_RS15850	PF13302	Acetyltransferase (GNAT) domain
BF89_RS15865	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BF89_RS15870	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
BF89_RS15880	PF00672	HAMP domain
BF89_RS15880	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS15880	PF17202	Single cache domain 3
BF89_RS15890	PF01565	FAD binding domain 
BF89_RS15890	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BF89_RS15895	PF01479	S4 domain
BF89_RS15895	PF00579	tRNA synthetases class I (W and Y)
BF89_RS15900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS15905	PF07849	Protein of unknown function (DUF1641)
BF89_RS15910	PF01638	HxlR-like helix-turn-helix
BF89_RS15915	PF07690	Major Facilitator Superfamily
BF89_RS15920	PF00248	Aldo/keto reductase family
BF89_RS15935	PF13460	NAD(P)H-binding 
BF89_RS15940	PF01235	Sodium:alanine symporter family
BF89_RS15945	PF01235	Sodium:alanine symporter family
BF89_RS15950	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS15950	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS15955	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS15955	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS15965	PF04235	Protein of unknown function (DUF418)
BF89_RS15970	PF00210	Ferritin-like domain
BF89_RS15980	PF03641	Possible lysine decarboxylase
BF89_RS15995	PF00210	Ferritin-like domain
BF89_RS16000	PF01235	Sodium:alanine symporter family
BF89_RS16010	PF02080	TrkA-C domain
BF89_RS16015	PF00999	Sodium/hydrogen exchanger family
BF89_RS16025	PF01047	MarR family
BF89_RS16030	PF02678	Pirin
BF89_RS16030	PF17954	Quercetinase C-terminal cupin domain
BF89_RS16035	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF89_RS16035	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF89_RS16035	PF01447	Thermolysin metallopeptidase, catalytic domain
BF89_RS16035	PF03413	Peptidase propeptide and YPEB domain
BF89_RS16040	PF01883	Iron-sulfur cluster assembly protein
BF89_RS16045	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS16045	PF00672	HAMP domain
BF89_RS16045	PF02743	Cache domain
BF89_RS16055	PF08264	Anticodon-binding domain of tRNA
BF89_RS16055	PF09334	tRNA synthetases class I (M)
BF89_RS16065	PF00989	PAS fold
BF89_RS16065	PF16736	Single Cache-like 
BF89_RS16065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS16065	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS16070	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS16070	PF00072	Response regulator receiver domain
BF89_RS16075	PF03734	L,D-transpeptidase catalytic domain
BF89_RS16075	PF17969	L,D-transpeptidase C-terminal domain
BF89_RS16085	PF09335	SNARE associated Golgi protein
BF89_RS16120	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS16120	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS16130	PF02096	60Kd inner membrane protein
BF89_RS16140	PF13520	Amino acid permease
BF89_RS16145	PF07690	Major Facilitator Superfamily
BF89_RS16165	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS16165	PF02743	Cache domain
BF89_RS16165	PF00672	HAMP domain
BF89_RS16170	PF01910	Thiamine-binding protein
BF89_RS16175	PF10835	Protein of unknown function (DUF2573)
BF89_RS16180	PF01619	Proline dehydrogenase
BF89_RS16185	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS16185	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS16190	PF14115	YuzL-like protein
BF89_RS16195	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS16195	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
BF89_RS16195	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
BF89_RS16200	PF02803	Thiolase, C-terminal domain
BF89_RS16200	PF00108	Thiolase, N-terminal domain
BF89_RS16210	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS16210	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS16210	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS16215	PF00753	Metallo-beta-lactamase superfamily
BF89_RS16220	PF13305	Tetracyclin repressor-like, C-terminal domain
BF89_RS16220	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS16245	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF89_RS16245	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF89_RS16295	PF03960	ArsC family
BF89_RS16300	PF01597	Glycine cleavage H-protein
BF89_RS16305	PF01751	Toprim domain
BF89_RS16310	PF00085	Thioredoxin
BF89_RS16325	PF00005	ABC transporter
BF89_RS16325	PF09383	NIL domain
BF89_RS16330	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS16335	PF03180	NLPA lipoprotein
BF89_RS16340	PF03180	NLPA lipoprotein
BF89_RS16345	PF00005	ABC transporter
BF89_RS16350	PF01458	Uncharacterized protein family (UPF0051)
BF89_RS16355	PF00266	Aminotransferase class-V
BF89_RS16360	PF01592	NifU-like N terminal domain
BF89_RS16365	PF01458	Uncharacterized protein family (UPF0051)
BF89_RS16375	PF04892	VanZ like family 
BF89_RS16380	PF03551	Transcriptional regulator PadR-like family
BF89_RS16390	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS16395	PF08827	Domain of unknown function (DUF1805)
BF89_RS16405	PF01551	Peptidase family M23
BF89_RS16410	PF04055	Radical SAM superfamily
BF89_RS16410	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
BF89_RS16430	PF10086	YhfC intramembrane metalloprotease
BF89_RS16435	PF13411	MerR HTH family regulatory protein
BF89_RS16435	PF07739	TipAS antibiotic-recognition domain
BF89_RS16440	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BF89_RS16445	PF06265	Protein of unknown function (DUF1027)
BF89_RS16465	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
BF89_RS16470	PF01934	Protein of unknown function DUF86
BF89_RS16480	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS16485	PF02525	Flavodoxin-like fold
BF89_RS16500	PF04608	Phosphatidylglycerophosphatase A
BF89_RS16515	PF01106	NifU-like domain
BF89_RS16520	PF07315	Protein of unknown function (DUF1462)
BF89_RS16525	PF13427	Domain of unknown function (DUF4111)
BF89_RS16525	PF01909	Nucleotidyltransferase domain
BF89_RS16560	PF08274	PhnA Zinc-Ribbon 
BF89_RS16560	PF03831	PhnA domain
BF89_RS16565	PF03649	Uncharacterised protein family (UPF0014)
BF89_RS16570	PF00664	ABC transporter transmembrane region
BF89_RS16570	PF00005	ABC transporter
BF89_RS16570	PF03412	Peptidase C39 family
BF89_RS16580	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS16585	PF07293	Protein of unknown function (DUF1450)
BF89_RS16590	PF01678	Diaminopimelate epimerase
BF89_RS16595	PF01521	Iron-sulphur cluster biosynthesis
BF89_RS16615	PF04463	Protein of unknown function (DUF523)
BF89_RS16630	PF06445	GyrI-like small molecule binding domain
BF89_RS16640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS16645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS16650	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS16650	PF00293	NUDIX domain
BF89_RS16660	PF06725	3D domain
BF89_RS16665	PF02789	Cytosol aminopeptidase family, N-terminal domain
BF89_RS16665	PF00883	Cytosol aminopeptidase family, catalytic domain
BF89_RS16670	PF02457	DisA bacterial checkpoint controller nucleotide-binding
BF89_RS16670	PF10372	Bacterial membrane-spanning protein N-terminus
BF89_RS16675	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
BF89_RS16675	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
BF89_RS16675	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
BF89_RS16675	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
BF89_RS16680	PF00483	Nucleotidyl transferase
BF89_RS16690	PF02632	BioY family
BF89_RS16700	PF03061	Thioesterase superfamily
BF89_RS16705	PF03129	Anticodon binding domain
BF89_RS16705	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS16720	PF03600	Citrate transporter
BF89_RS16725	PF00929	Exonuclease
BF89_RS16730	PF08810	Kinase associated protein B
BF89_RS16745	PF00155	Aminotransferase class I and II
BF89_RS16755	PF08386	TAP-like protein
BF89_RS16755	PF00561	alpha/beta hydrolase fold
BF89_RS16760	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF89_RS16760	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF89_RS16765	PF01037	Lrp/AsnC ligand binding domain
BF89_RS16770	PF00155	Aminotransferase class I and II
BF89_RS16775	PF00575	S1 RNA binding domain
BF89_RS16780	PF04070	Domain of unknown function (DUF378)
BF89_RS16790	PF00342	Phosphoglucose isomerase
BF89_RS16795	PF08868	YugN-like family
BF89_RS16800	PF02254	TrkA-N domain
BF89_RS16800	PF07885	Ion channel
BF89_RS16805	PF02308	MgtC family
BF89_RS16840	PF05697	Bacterial trigger factor protein (TF)
BF89_RS16840	PF05698	Bacterial trigger factor protein (TF) C-terminus
BF89_RS16935	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF89_RS16935	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF89_RS16940	PF00128	Alpha amylase, catalytic domain
BF89_RS16940	PF02806	Alpha amylase, C-terminal all-beta domain
BF89_RS16940	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BF89_RS16945	PF00483	Nucleotidyl transferase
BF89_RS16950	PF00483	Nucleotidyl transferase
BF89_RS16955	PF08323	Starch synthase catalytic domain
BF89_RS16955	PF00534	Glycosyl transferases group 1
BF89_RS16960	PF00343	Carbohydrate phosphorylase
BF89_RS16980	PF00313	'Cold-shock' DNA-binding domain
BF89_RS16985	PF01258	Prokaryotic dksA/traR C4-type zinc finger
BF89_RS16990	PF01040	UbiA prenyltransferase family
BF89_RS16995	PF00425	chorismate binding enzyme
BF89_RS17000	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS17000	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BF89_RS17000	PF16582	Middle domain of thiamine pyrophosphate
BF89_RS17005	PF00561	alpha/beta hydrolase fold
BF89_RS17010	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS17015	PF00501	AMP-binding enzyme
BF89_RS17015	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS17020	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF89_RS17020	PF13378	Enolase C-terminal domain-like
BF89_RS17025	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS17025	PF00072	Response regulator receiver domain
BF89_RS17030	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS17030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17035	PF02557	D-alanyl-D-alanine carboxypeptidase
BF89_RS17050	PF01979	Amidohydrolase family
BF89_RS17055	PF03841	L-seryl-tRNA selenium transferase
BF89_RS17060	PF07071	KDGP aldolase
BF89_RS17070	PF07702	UTRA domain
BF89_RS17070	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS17075	PF02447	GntP family permease
BF89_RS17090	PF00005	ABC transporter
BF89_RS17095	PF02687	FtsX-like permease family
BF89_RS17100	PF02687	FtsX-like permease family
BF89_RS17105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17110	PF00072	Response regulator receiver domain
BF89_RS17110	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS17120	PF00005	ABC transporter
BF89_RS17125	PF02687	FtsX-like permease family
BF89_RS17130	PF00398	Ribosomal RNA adenine dimethylase
BF89_RS17135	PF09335	SNARE associated Golgi protein
BF89_RS17150	PF00248	Aldo/keto reductase family
BF89_RS17170	PF00781	Diacylglycerol kinase catalytic domain
BF89_RS17175	PF00156	Phosphoribosyl transferase domain
BF89_RS17200	PF00072	Response regulator receiver domain
BF89_RS17200	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS17205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17205	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS17205	PF00672	HAMP domain
BF89_RS17210	PF09515	Thiamine transporter protein (Thia_YuaJ)
BF89_RS17220	PF07670	Nucleoside recognition
BF89_RS17220	PF02421	Ferrous iron transport protein B
BF89_RS17220	PF17910	FeoB cytosolic helical domain
BF89_RS17220	PF07664	Ferrous iron transport protein B C terminus
BF89_RS17240	PF04012	PspA/IM30 family
BF89_RS17265	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS17265	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS17280	PF10676	Spore germination protein gerPA/gerPF
BF89_RS17285	PF02322	Cytochrome bd terminal oxidase subunit II
BF89_RS17290	PF01654	Cytochrome bd terminal oxidase subunit I
BF89_RS17295	PF00484	Carbonic anhydrase
BF89_RS17300	PF01809	Putative membrane protein insertion efficiency factor
BF89_RS17305	PF02664	S-Ribosylhomocysteinase (LuxS)
BF89_RS17325	PF00293	NUDIX domain
BF89_RS17350	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS17355	PF00005	ABC transporter
BF89_RS17380	PF00561	alpha/beta hydrolase fold
BF89_RS17380	PF08386	TAP-like protein
BF89_RS17385	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS17385	PF00989	PAS fold
BF89_RS17385	PF08447	PAS fold
BF89_RS17385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17390	PF13426	PAS domain
BF89_RS17390	PF00989	PAS fold
BF89_RS17390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17390	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS17390	PF13188	PAS domain
BF89_RS17395	PF01784	NIF3 (NGG1p interacting factor 3)
BF89_RS17430	PF01293	Phosphoenolpyruvate carboxykinase
BF89_RS17435	PF00438	S-adenosylmethionine synthetase, N-terminal domain
BF89_RS17435	PF02772	S-adenosylmethionine synthetase, central domain
BF89_RS17435	PF02773	S-adenosylmethionine synthetase, C-terminal domain
BF89_RS17450	PF00994	Probable molybdopterin binding domain
BF89_RS17455	PF12804	MobA-like NTP transferase domain
BF89_RS17460	PF00534	Glycosyl transferases group 1
BF89_RS17460	PF13439	Glycosyltransferase Family 4
BF89_RS17465	PF01569	PAP2 superfamily
BF89_RS17470	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS17475	PF12146	Serine aminopeptidase, S33
BF89_RS17480	PF10776	Protein of unknown function (DUF2600)
BF89_RS17495	PF01177	Asp/Glu/Hydantoin racemase
BF89_RS17505	PF00005	ABC transporter
BF89_RS17505	PF13732	Domain of unknown function (DUF4162)
BF89_RS17510	PF06962	Putative rRNA methylase
BF89_RS17515	PF04055	Radical SAM superfamily
BF89_RS17515	PF16199	Radical_SAM C-terminal domain
BF89_RS17520	PF10732	Protein of unknown function (DUF2524)
BF89_RS17530	PF04235	Protein of unknown function (DUF418)
BF89_RS17530	PF07786	Protein of unknown function (DUF1624)
BF89_RS17535	PF00005	ABC transporter
BF89_RS17545	PF00589	Phage integrase family
BF89_RS17550	PF02080	TrkA-C domain
BF89_RS17555	PF00999	Sodium/hydrogen exchanger family
BF89_RS17560	PF07690	Major Facilitator Superfamily
BF89_RS17565	PF08264	Anticodon-binding domain of tRNA
BF89_RS17565	PF13603	Leucyl-tRNA synthetase, Domain 2
BF89_RS17565	PF00133	tRNA synthetases class I (I, L, M and V)
BF89_RS17565	PF09334	tRNA synthetases class I (M)
BF89_RS17595	PF03845	Spore germination protein
BF89_RS17600	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS17605	PF00561	alpha/beta hydrolase fold
BF89_RS17615	PF00581	Rhodanese-like domain
BF89_RS17635	PF04055	Radical SAM superfamily
BF89_RS17635	PF06463	Molybdenum Cofactor Synthesis C
BF89_RS17640	PF00899	ThiF family
BF89_RS17645	PF01967	MoaC family
BF89_RS17650	PF03453	MoeA N-terminal region (domain I and II)
BF89_RS17650	PF03454	MoeA C-terminal region (domain IV)
BF89_RS17650	PF00994	Probable molybdopterin binding domain
BF89_RS17655	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
BF89_RS17660	PF02391	MoaE protein
BF89_RS17675	PF06800	Sugar transport protein
BF89_RS17685	PF02559	CarD-like/TRCF domain
BF89_RS17695	PF10957	Sporulation protein Cse60 
BF89_RS17705	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
BF89_RS17710	PF01022	Bacterial regulatory protein, arsR family
BF89_RS17715	PF07690	Major Facilitator Superfamily
BF89_RS17725	PF01943	Polysaccharide biosynthesis protein
BF89_RS17725	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS17730	PF01479	S4 domain
BF89_RS17730	PF00849	RNA pseudouridylate synthase
BF89_RS17735	PF08220	DeoR-like helix-turn-helix domain
BF89_RS17740	PF01546	Peptidase family M20/M25/M40
BF89_RS17745	PF02834	LigT like Phosphoesterase
BF89_RS17755	PF17999	Pullulanase N1-terminal domain
BF89_RS17755	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BF89_RS17755	PF00128	Alpha amylase, catalytic domain
BF89_RS17760	PF01636	Phosphotransferase enzyme family
BF89_RS17765	PF14165	YtzH-like protein
BF89_RS17770	PF02390	Putative methyltransferase 
BF89_RS17775	PF00753	Metallo-beta-lactamase superfamily
BF89_RS17785	PF05343	M42 glutamyl aminopeptidase
BF89_RS17790	PF01931	Protein of unknown function DUF84
BF89_RS17795	PF00085	Thioredoxin
BF89_RS17800	PF07285	Protein of unknown function (DUF1444)
BF89_RS17805	PF14794	Domain of unknown function (DUF4479)
BF89_RS17805	PF01588	Putative tRNA binding domain
BF89_RS17815	PF09397	Ftsk gamma domain
BF89_RS17815	PF17854	FtsK alpha domain
BF89_RS17815	PF01580	FtsK/SpoIIIE family
BF89_RS17825	PF01225	Mur ligase family, catalytic domain
BF89_RS17825	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS17825	PF08245	Mur ligase middle domain
BF89_RS17830	PF13302	Acetyltransferase (GNAT) domain
BF89_RS17850	PF02073	Thermophilic metalloprotease (M29)
BF89_RS17860	PF11009	Protein of unknown function (DUF2847)
BF89_RS17865	PF07537	CamS sex pheromone cAM373 precursor
BF89_RS17875	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS17900	PF01741	Large-conductance mechanosensitive channel, MscL
BF89_RS17905	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF89_RS17910	PF12796	Ankyrin repeats (3 copies)
BF89_RS17915	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS17915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS17915	PF00672	HAMP domain
BF89_RS17915	PF13426	PAS domain
BF89_RS17920	PF00072	Response regulator receiver domain
BF89_RS17920	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS17930	PF00850	Histone deacetylase domain
BF89_RS17935	PF00571	CBS domain
BF89_RS17940	PF00583	Acetyltransferase (GNAT) family
BF89_RS17945	PF00501	AMP-binding enzyme
BF89_RS17945	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS17955	PF04542	Sigma-70 region 2 
BF89_RS17955	PF08281	Sigma-70, region 4
BF89_RS17965	PF00579	tRNA synthetases class I (W and Y)
BF89_RS17965	PF01479	S4 domain
BF89_RS17980	PF00163	Ribosomal protein S4/S9 N-terminal domain
BF89_RS17980	PF01479	S4 domain
BF89_RS17985	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF89_RS17990	PF13185	GAF domain
BF89_RS18000	PF00892	EamA-like transporter family
BF89_RS18005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS18005	PF03466	LysR substrate binding domain
BF89_RS18010	PF06160	Septation ring formation regulator, EzrA 
BF89_RS18015	PF00266	Aminotransferase class-V
BF89_RS18020	PF02926	THUMP domain
BF89_RS18020	PF02568	Thiamine biosynthesis protein (ThiI)
BF89_RS18025	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS18030	PF00501	AMP-binding enzyme
BF89_RS18030	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS18040	PF07969	Amidohydrolase family
BF89_RS18045	PF01513	ATP-NAD kinase
BF89_RS18055	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
BF89_RS18060	PF08534	Redoxin
BF89_RS18065	PF02384	N-6 DNA Methylase
BF89_RS18070	PF00871	Acetokinase family
BF89_RS18085	PF12787	EcsC protein family
BF89_RS18090	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS18090	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS18105	PF00764	Arginosuccinate synthase
BF89_RS18110	PF14698	Argininosuccinate lyase C-terminal
BF89_RS18110	PF00206	Lyase
BF89_RS18130	PF00582	Universal stress protein family
BF89_RS18140	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
BF89_RS18140	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF89_RS18150	PF01381	Helix-turn-helix
BF89_RS18160	PF07883	Cupin domain
BF89_RS18165	PF12746	GNAT acetyltransferase
BF89_RS18195	PF11518	Protein of unknown function (DUF3221)
BF89_RS18200	PF00557	Metallopeptidase family M24
BF89_RS18200	PF01321	Creatinase/Prolidase N-terminal domain
BF89_RS18215	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS18215	PF07085	DRTGG domain
BF89_RS18215	PF00571	CBS domain
BF89_RS18215	PF03061	Thioesterase superfamily
BF89_RS18230	PF14007	YtpI-like protein
BF89_RS18235	PF02272	DHHA1 domain
BF89_RS18235	PF01368	DHH family
BF89_RS18245	PF14034	Sporulation protein YtrH
BF89_RS18250	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF89_RS18250	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF89_RS18250	PF14579	Helix-hairpin-helix motif
BF89_RS18250	PF02811	PHP domain
BF89_RS18250	PF01336	OB-fold nucleic acid binding domain
BF89_RS18255	PF00390	Malic enzyme, N-terminal domain
BF89_RS18255	PF03949	Malic enzyme, NAD binding domain
BF89_RS18260	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS18265	PF01039	Carboxyl transferase domain
BF89_RS18265	PF17848	Acetyl-coA carboxylase zinc finger domain
BF89_RS18270	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
BF89_RS18275	PF00365	Phosphofructokinase
BF89_RS18280	PF00224	Pyruvate kinase, barrel domain
BF89_RS18280	PF02887	Pyruvate kinase, alpha/beta domain
BF89_RS18280	PF00391	PEP-utilising enzyme, mobile domain
BF89_RS18285	PF04186	FxsA cytoplasmic membrane protein 
BF89_RS18290	PF01594	AI-2E family transporter
BF89_RS18295	PF04284	Protein of unknown function (DUF441)
BF89_RS18305	PF00285	Citrate synthase, C-terminal domain
BF89_RS18310	PF00180	Isocitrate/isopropylmalate dehydrogenase
BF89_RS18315	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BF89_RS18315	PF00056	lactate/malate dehydrogenase, NAD binding domain
BF89_RS18330	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS18330	PF00072	Response regulator receiver domain
BF89_RS18335	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS18335	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS18335	PF16736	Single Cache-like 
BF89_RS18335	PF00989	PAS fold
BF89_RS18340	PF01367	5'-3' exonuclease, C-terminal SAM fold
BF89_RS18340	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
BF89_RS18340	PF00476	DNA polymerase family A
BF89_RS18345	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
BF89_RS18345	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
BF89_RS18345	PF06827	Zinc finger found in FPG and IleRS
BF89_RS18350	PF02659	Putative manganese efflux pump
BF89_RS18355	PF01121	Dephospho-CoA kinase
BF89_RS18360	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BF89_RS18360	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BF89_RS18365	PF02675	S-adenosylmethionine decarboxylase 
BF89_RS18370	PF03477	ATP cone domain
BF89_RS18375	PF07261	Replication initiation and membrane attachment
BF89_RS18380	PF07319	Primosomal protein DnaI N-terminus
BF89_RS18380	PF01695	IstB-like ATP binding protein
BF89_RS18385	PF08812	YtxC-like family
BF89_RS18390	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF89_RS18390	PF03129	Anticodon binding domain
BF89_RS18390	PF02824	TGS domain
BF89_RS18390	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS18395	PF00707	Translation initiation factor IF-3, C-terminal domain
BF89_RS18395	PF05198	Translation initiation factor IF-3, N-terminal domain
BF89_RS18400	PF01632	Ribosomal protein L35
BF89_RS18405	PF00453	Ribosomal protein L20
BF89_RS18415	PF05343	M42 glutamyl aminopeptidase
BF89_RS18420	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS18420	PF16859	Tetracyclin repressor-like, C-terminal domain
BF89_RS18430	PF07690	Major Facilitator Superfamily
BF89_RS18455	PF01966	HD domain
BF89_RS18460	PF14098	Small, acid-soluble spore protein I
BF89_RS18465	PF00588	SpoU rRNA Methylase family
BF89_RS18465	PF08032	RNA 2'-O ribose methyltransferase substrate binding
BF89_RS18470	PF01409	tRNA synthetases class II core domain (F)
BF89_RS18470	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
BF89_RS18475	PF01588	Putative tRNA binding domain
BF89_RS18475	PF03147	Ferredoxin-fold anticodon binding domain
BF89_RS18475	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
BF89_RS18475	PF03483	B3/4 domain
BF89_RS18475	PF03484	tRNA synthetase B5 domain
BF89_RS18480	PF01336	OB-fold nucleic acid binding domain
BF89_RS18480	PF00152	tRNA synthetases class II (D, K and N) 
BF89_RS18500	PF11858	Domain of unknown function (DUF3378)
BF89_RS18500	PF01351	Ribonuclease HII
BF89_RS18505	PF05164	Cell division protein ZapA
BF89_RS18510	PF02674	Colicin V production protein
BF89_RS18515	PF14716	Helix-hairpin-helix domain
BF89_RS18515	PF14791	DNA polymerase beta thumb 
BF89_RS18515	PF02811	PHP domain
BF89_RS18520	PF00488	MutS domain V
BF89_RS18520	PF01713	Smr domain
BF89_RS18530	PF00849	RNA pseudouridylate synthase
BF89_RS18530	PF01479	S4 domain
BF89_RS18535	PF05525	Branched-chain amino acid transport protein
BF89_RS18540	PF05031	Iron Transport-associated domain 
BF89_RS18550	PF05031	Iron Transport-associated domain 
BF89_RS18555	PF01497	Periplasmic binding protein
BF89_RS18560	PF01032	FecCD transport family
BF89_RS18565	PF00005	ABC transporter
BF89_RS18570	PF04203	Sortase domain
BF89_RS18575	PF03992	Antibiotic biosynthesis monooxygenase
BF89_RS18585	PF17785	PUA-like domain
BF89_RS18585	PF10672	S-adenosylmethionine-dependent methyltransferase
BF89_RS18590	PF09962	Uncharacterized conserved protein (DUF2196)
BF89_RS18600	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS18600	PF00072	Response regulator receiver domain
BF89_RS18605	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS18605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS18610	PF00005	ABC transporter
BF89_RS18640	PF05163	DinB family
BF89_RS18645	PF01032	FecCD transport family
BF89_RS18650	PF01497	Periplasmic binding protein
BF89_RS18660	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS18660	PF00501	AMP-binding enzyme
BF89_RS18665	PF08359	YsiA-like protein, C-terminal region
BF89_RS18665	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS18670	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS18675	PF01012	Electron transfer flavoprotein domain
BF89_RS18680	PF01012	Electron transfer flavoprotein domain
BF89_RS18680	PF00766	Electron transfer flavoprotein FAD-binding domain
BF89_RS18685	PF00085	Thioredoxin
BF89_RS18690	PF01541	GIY-YIG catalytic domain
BF89_RS18690	PF02151	UvrB/uvrC motif
BF89_RS18690	PF08459	UvrC Helix-hairpin-helix N-terminal
BF89_RS18695	PF10702	Protein of unknown function (DUF2507)
BF89_RS18700	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
BF89_RS18705	PF02910	Fumarate reductase flavoprotein C-term
BF89_RS18705	PF00890	FAD binding domain
BF89_RS18710	PF13085	2Fe-2S iron-sulfur cluster binding domain
BF89_RS18710	PF13183	4Fe-4S dicluster domain
BF89_RS18715	PF03061	Thioesterase superfamily
BF89_RS18720	PF02557	D-alanyl-D-alanine carboxypeptidase
BF89_RS18725	PF01618	MotA/TolQ/ExbB proton channel family
BF89_RS18735	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
BF89_RS18750	PF02082	Transcriptional regulator
BF89_RS18755	PF00230	Major intrinsic protein
BF89_RS18760	PF13536	Putative multidrug resistance efflux transporter
BF89_RS18765	PF01381	Helix-turn-helix
BF89_RS18765	PF07883	Cupin domain
BF89_RS18770	PF04024	PspC domain
BF89_RS18785	PF04397	LytTr DNA-binding domain
BF89_RS18785	PF00072	Response regulator receiver domain
BF89_RS18790	PF06580	Histidine kinase
BF89_RS18790	PF07694	5TMR of 5TMR-LYT
BF89_RS18790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS18795	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS18795	PF00005	ABC transporter
BF89_RS18800	PF00005	ABC transporter
BF89_RS18800	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
BF89_RS18805	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS18810	PF12911	N-terminal TM domain of oligopeptide transport permease C
BF89_RS18810	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS18815	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS18820	PF07969	Amidohydrolase family
BF89_RS18825	PF07969	Amidohydrolase family
BF89_RS18835	PF00860	Permease family
BF89_RS18840	PF00196	Bacterial regulatory proteins, luxR family
BF89_RS18855	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS18865	PF07690	Major Facilitator Superfamily
BF89_RS18870	PF01177	Asp/Glu/Hydantoin racemase
BF89_RS18875	PF10646	Sporulation and spore germination
BF89_RS18880	PF01138	3' exoribonuclease family, domain 1
BF89_RS18880	PF03725	3' exoribonuclease family, domain 2
BF89_RS18885	PF01725	Ham1 family
BF89_RS18890	PF12850	Calcineurin-like phosphoesterase superfamily domain
BF89_RS18910	PF11724	YvbH-like oligomerisation region
BF89_RS18910	PF08000	Bacterial PH domain
BF89_RS18930	PF05697	Bacterial trigger factor protein (TF)
BF89_RS18930	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
BF89_RS18930	PF05698	Bacterial trigger factor protein (TF) C-terminus
BF89_RS18935	PF07724	AAA domain (Cdc48 subfamily)
BF89_RS18935	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF89_RS18935	PF06689	ClpX C4-type zinc finger
BF89_RS18940	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF89_RS18940	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS18945	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
BF89_RS18945	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF89_RS18945	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS18950	PF01926	50S ribosome-binding GTPase
BF89_RS18955	PF02566	OsmC-like protein
BF89_RS18960	PF01047	MarR family
BF89_RS18965	PF01488	Shikimate / quinate 5-dehydrogenase
BF89_RS18965	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
BF89_RS18965	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
BF89_RS18970	PF01578	Cytochrome C assembly protein
BF89_RS18975	PF03900	Porphobilinogen deaminase, C-terminal domain
BF89_RS18975	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
BF89_RS18980	PF02602	Uroporphyrinogen-III synthase HemD
BF89_RS18985	PF00490	Delta-aminolevulinic acid dehydratase
BF89_RS18990	PF00202	Aminotransferase class-III
BF89_RS18995	PF01476	LysM domain
BF89_RS19005	PF10458	Valyl tRNA synthetase tRNA binding arm
BF89_RS19005	PF08264	Anticodon-binding domain of tRNA
BF89_RS19005	PF00133	tRNA synthetases class I (I, L, M and V)
BF89_RS19010	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS19010	PF08245	Mur ligase middle domain
BF89_RS19020	PF02545	Maf-like protein
BF89_RS19025	PF04002	RadC-like JAB domain
BF89_RS19035	PF04085	rod shape-determining protein MreC
BF89_RS19045	PF03775	Septum formation inhibitor MinC, C-terminal domain
BF89_RS19050	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
BF89_RS19055	PF01551	Peptidase family M23
BF89_RS19060	PF02163	Peptidase family M50
BF89_RS19065	PF10150	Ribonuclease E/G family
BF89_RS19065	PF00575	S1 RNA binding domain
BF89_RS19070	PF00829	Ribosomal prokaryotic L21 protein
BF89_RS19075	PF04327	Cysteine protease Prp
BF89_RS19080	PF01016	Ribosomal L27 protein
BF89_RS19085	PF14682	Sporulation initiation phospho-transferase B, C-terminal
BF89_RS19085	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
BF89_RS19090	PF01926	50S ribosome-binding GTPase
BF89_RS19090	PF09269	Domain of unknown function (DUF1967)
BF89_RS19090	PF01018	GTP1/OBG
BF89_RS19095	PF00072	Response regulator receiver domain
BF89_RS19095	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS19105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS19110	PF00005	ABC transporter
BF89_RS19115	PF02687	FtsX-like permease family
BF89_RS19120	PF02687	FtsX-like permease family
BF89_RS19125	PF00800	Prephenate dehydratase
BF89_RS19125	PF01842	ACT domain
BF89_RS19130	PF03475	3-alpha domain
BF89_RS19130	PF03473	MOSC domain
BF89_RS19135	PF08279	HTH domain
BF89_RS19135	PF02829	3H domain
BF89_RS19140	PF00266	Aminotransferase class-V
BF89_RS19145	PF02910	Fumarate reductase flavoprotein C-term
BF89_RS19145	PF00890	FAD binding domain
BF89_RS19150	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
BF89_RS19150	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
BF89_RS19155	PF02445	Quinolinate synthetase A protein
BF89_RS19160	PF01476	LysM domain
BF89_RS19175	PF01022	Bacterial regulatory protein, arsR family
BF89_RS19180	PF00892	EamA-like transporter family
BF89_RS19185	PF00892	EamA-like transporter family
BF89_RS19195	PF01497	Periplasmic binding protein
BF89_RS19200	PF07499	RuvA, C-terminal domain
BF89_RS19200	PF01330	RuvA N terminal domain
BF89_RS19205	PF17864	RuvB AAA lid domain
BF89_RS19205	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BF89_RS19205	PF05491	RuvB C-terminal winged helix domain
BF89_RS19210	PF11146	Protein of unknown function (DUF2905)
BF89_RS19215	PF02547	Queuosine biosynthesis protein
BF89_RS19220	PF01702	Queuine tRNA-ribosyltransferase
BF89_RS19225	PF02699	Preprotein translocase subunit
BF89_RS19235	PF04239	Protein of unknown function (DUF421)
BF89_RS19240	PF01943	Polysaccharide biosynthesis protein
BF89_RS19240	PF14667	Polysaccharide biosynthesis C-terminal domain
BF89_RS19245	PF13797	Post-transcriptional regulator
BF89_RS19250	PF07549	SecD/SecF GG Motif
BF89_RS19250	PF02355	Protein export membrane protein
BF89_RS19255	PF16916	Dimerisation domain of Zinc Transporter
BF89_RS19255	PF01545	Cation efflux family
BF89_RS19260	PF17768	RecJ OB domain
BF89_RS19260	PF01368	DHH family
BF89_RS19260	PF02272	DHHA1 domain
BF89_RS19260	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
BF89_RS19265	PF00156	Phosphoribosyl transferase domain
BF89_RS19270	PF13291	ACT domain
BF89_RS19270	PF02824	TGS domain
BF89_RS19270	PF04607	Region found in RelA / SpoT proteins
BF89_RS19275	PF02580	D-Tyr-tRNA(Tyr) deacylase
BF89_RS19285	PF13393	Histidyl-tRNA synthetase
BF89_RS19285	PF03129	Anticodon binding domain
BF89_RS19290	PF01336	OB-fold nucleic acid binding domain
BF89_RS19290	PF00152	tRNA synthetases class II (D, K and N) 
BF89_RS19290	PF02938	GAD domain
BF89_RS19295	PF00899	ThiF family
BF89_RS19305	PF05496	Holliday junction DNA helicase RuvB P-loop domain
BF89_RS19305	PF12002	MgsA AAA+ ATPase C terminal
BF89_RS19305	PF16193	AAA C-terminal domain
BF89_RS19310	PF02082	Transcriptional regulator
BF89_RS19315	PF00266	Aminotransferase class-V
BF89_RS19330	PF14490	Helix-hairpin-helix containing domain
BF89_RS19330	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
BF89_RS19330	PF13538	UvrD-like helicase C-terminal domain
BF89_RS19350	PF01594	AI-2E family transporter
BF89_RS19360	PF01411	tRNA synthetases class II (A)
BF89_RS19360	PF02272	DHHA1 domain
BF89_RS19360	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF89_RS19365	PF06135	IreB regulatory phosphoprotein
BF89_RS19370	PF03652	Holliday junction resolvase
BF89_RS19375	PF06949	Protein of unknown function (DUF1292)
BF89_RS19380	PF02618	YceG-like family
BF89_RS19385	PF01596	O-methyltransferase
BF89_RS19390	PF01136	Peptidase family U32
BF89_RS19395	PF01136	Peptidase family U32
BF89_RS19395	PF16325	Peptidase family U32 C-terminal domain
BF89_RS19400	PF00485	Phosphoribulokinase / Uridine kinase family
BF89_RS19405	PF03449	Transcription elongation factor, N-terminal
BF89_RS19405	PF01272	Transcription elongation factor, GreA/GreB, C-term
BF89_RS19410	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS19410	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS19425	PF08241	Methyltransferase domain
BF89_RS19430	PF01048	Phosphorylase superfamily
BF89_RS19435	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS19440	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF89_RS19445	PF00171	Aldehyde dehydrogenase family
BF89_RS19445	PF00465	Iron-containing alcohol dehydrogenase 
BF89_RS19450	PF14143	YrhC-like protein
BF89_RS19455	PF01497	Periplasmic binding protein
BF89_RS19460	PF01032	FecCD transport family
BF89_RS19465	PF00005	ABC transporter
BF89_RS19495	PF07681	DoxX
BF89_RS19500	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS19510	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
BF89_RS19515	PF05922	Peptidase inhibitor I9
BF89_RS19515	PF13860	FlgD Ig-like domain
BF89_RS19515	PF02225	PA domain
BF89_RS19515	PF00082	Subtilase family
BF89_RS19550	PF08386	TAP-like protein
BF89_RS19550	PF00561	alpha/beta hydrolase fold
BF89_RS19560	PF00245	Alkaline phosphatase
BF89_RS19570	PF04607	Region found in RelA / SpoT proteins
BF89_RS19575	PF00881	Nitroreductase family
BF89_RS19580	PF00471	Ribosomal protein L33
BF89_RS19585	PF16244	Domain of unknown function (DUF4901)
BF89_RS19595	PF04542	Sigma-70 region 2 
BF89_RS19595	PF04545	Sigma-70, region 4
BF89_RS19600	PF02666	Phosphatidylserine decarboxylase
BF89_RS19615	PF01926	50S ribosome-binding GTPase
BF89_RS19620	PF01488	Shikimate / quinate 5-dehydrogenase
BF89_RS19620	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
BF89_RS19620	PF08501	Shikimate dehydrogenase substrate binding domain
BF89_RS19625	PF01985	CRS1 / YhbY (CRM) domain
BF89_RS19630	PF01467	Cytidylyltransferase-like
BF89_RS19635	PF01966	HD domain
BF89_RS19645	PF13649	Methyltransferase domain
BF89_RS19650	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF89_RS19650	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF89_RS19655	PF10531	SLBB domain
BF89_RS19660	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF89_RS19670	PF14141	YqzM-like protein
BF89_RS19675	PF06144	DNA polymerase III, delta subunit
BF89_RS19680	PF01649	Ribosomal protein S20
BF89_RS19685	PF03418	Germination protease
BF89_RS19695	PF00009	Elongation factor Tu GTP binding domain
BF89_RS19695	PF03144	Elongation factor Tu domain 2
BF89_RS19695	PF06421	GTP-binding protein LepA C-terminus
BF89_RS19695	PF00679	Elongation factor G C-terminus
BF89_RS19700	PF01638	HxlR-like helix-turn-helix
BF89_RS19705	PF06969	HemN C-terminal domain
BF89_RS19705	PF04055	Radical SAM superfamily
BF89_RS19710	PF01628	HrcA protein C terminal domain
BF89_RS19715	PF01025	GrpE
BF89_RS19720	PF00012	Hsp70 protein
BF89_RS19725	PF01556	DnaJ C terminal domain
BF89_RS19725	PF00226	DnaJ domain
BF89_RS19725	PF00684	DnaJ central domain
BF89_RS19735	PF04452	RNA methyltransferase
BF89_RS19740	PF01938	TRAM domain
BF89_RS19740	PF00919	Uncharacterized protein family UPF0004
BF89_RS19740	PF04055	Radical SAM superfamily
BF89_RS19745	PF01165	Ribosomal protein S21
BF89_RS19750	PF09424	Yqey-like protein
BF89_RS19755	PF07873	YabP family
BF89_RS19765	PF06898	Putative stage IV sporulation protein YqfD
BF89_RS19770	PF02562	PhoH-like protein
BF89_RS19775	PF07698	7TM receptor with intracellular HD hydrolase
BF89_RS19775	PF07697	7TM-HD extracellular
BF89_RS19775	PF01966	HD domain
BF89_RS19780	PF02130	Uncharacterized protein family UPF0054
BF89_RS19785	PF01219	Prokaryotic diacylglycerol kinase
BF89_RS19790	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF89_RS19795	PF01926	50S ribosome-binding GTPase
BF89_RS19795	PF07650	KH domain
BF89_RS19805	PF11967	Recombination protein O N terminal
BF89_RS19805	PF02565	Recombination protein O C terminal
BF89_RS19810	PF00571	CBS domain
BF89_RS19810	PF08279	HTH domain
BF89_RS19815	PF03618	Kinase/pyrophosphorylase
BF89_RS19830	PF08275	DNA primase catalytic core, N-terminal domain
BF89_RS19830	PF10410	DnaB-helicase binding domain of primase
BF89_RS19830	PF01807	CHC2 zinc finger
BF89_RS19835	PF04545	Sigma-70, region 4
BF89_RS19835	PF04542	Sigma-70 region 2 
BF89_RS19835	PF04539	Sigma-70 region 3
BF89_RS19835	PF03979	Sigma-70 factor, region 1.1
BF89_RS19835	PF00140	Sigma-70 factor, region 1.2
BF89_RS19840	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
BF89_RS19845	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
BF89_RS19850	PF01784	NIF3 (NGG1p interacting factor 3)
BF89_RS19855	PF02401	LytB protein
BF89_RS19865	PF00270	DEAD/DEAH box helicase
BF89_RS19865	PF00271	Helicase conserved C-terminal domain
BF89_RS19870	PF01261	Xylose isomerase-like TIM barrel
BF89_RS19875	PF11116	Protein of unknown function (DUF2624)
BF89_RS19880	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS19880	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS19885	PF00005	ABC transporter
BF89_RS19890	PF00950	ABC 3 transport family
BF89_RS19895	PF01475	Ferric uptake regulator family
BF89_RS19900	PF04551	GcpE protein
BF89_RS19920	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
BF89_RS19920	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
BF89_RS19925	PF07690	Major Facilitator Superfamily
BF89_RS19930	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS19930	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS19935	PF12849	PBP superfamily domain
BF89_RS19940	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS19945	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS19950	PF00005	ABC transporter
BF89_RS19955	PF01895	PhoU domain
BF89_RS19960	PF00483	Nucleotidyl transferase
BF89_RS19965	PF00471	Ribosomal protein L33
BF89_RS19970	PF01812	5-formyltetrahydrofolate cyclo-ligase family
BF89_RS19975	PF06014	Bacterial protein of unknown function (DUF910)
BF89_RS19980	PF00480	ROK family
BF89_RS19985	PF10958	Protein of unknown function (DUF2759)
BF89_RS19990	PF00753	Metallo-beta-lactamase superfamily
BF89_RS20000	PF01022	Bacterial regulatory protein, arsR family
BF89_RS20015	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF89_RS20020	PF01053	Cys/Met metabolism PLP-dependent enzyme
BF89_RS20030	PF02574	Homocysteine S-methyltransferase
BF89_RS20030	PF02219	Methylenetetrahydrofolate reductase
BF89_RS20040	PF04101	Glycosyltransferase family 28 C-terminal domain
BF89_RS20040	PF03033	Glycosyltransferase family 28 N-terminal domain
BF89_RS20075	PF00375	Sodium:dicarboxylate symporter family
BF89_RS20080	PF11117	Protein of unknown function (DUF2626)
BF89_RS20090	PF00437	Type II/IV secretion system protein
BF89_RS20095	PF00482	Type II secretion system (T2SS), protein F
BF89_RS20100	PF07963	Prokaryotic N-terminal methylation motif
BF89_RS20105	PF07963	Prokaryotic N-terminal methylation motif
BF89_RS20130	PF01202	Shikimate kinase
BF89_RS20135	PF14038	YqzE-like protein
BF89_RS20155	PF11079	Bacterial protein YqhG of unknown function
BF89_RS20160	PF00271	Helicase conserved C-terminal domain
BF89_RS20160	PF00176	SNF2 family N-terminal domain
BF89_RS20165	PF01571	Aminomethyltransferase folate-binding domain
BF89_RS20165	PF08669	Glycine cleavage T-protein C-terminal barrel domain
BF89_RS20170	PF02347	Glycine cleavage system P-protein
BF89_RS20175	PF02347	Glycine cleavage system P-protein
BF89_RS20190	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS20195	PF00005	ABC transporter
BF89_RS20235	PF00893	Small Multidrug Resistance protein
BF89_RS20240	PF00893	Small Multidrug Resistance protein
BF89_RS20250	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS20250	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF89_RS20255	PF00581	Rhodanese-like domain
BF89_RS20260	PF03099	Biotin/lipoate A/B protein ligase family
BF89_RS20275	PF02742	Iron dependent repressor, metal binding and dimerisation domain
BF89_RS20275	PF01325	Iron dependent repressor, N-terminal DNA binding domain
BF89_RS20280	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS20290	PF07136	Protein of unknown function (DUF1385)
BF89_RS20295	PF11085	Conserved membrane protein YqhR
BF89_RS20300	PF01220	Dehydroquinase class II
BF89_RS20305	PF00557	Metallopeptidase family M24
BF89_RS20305	PF01321	Creatinase/Prolidase N-terminal domain
BF89_RS20310	PF01132	Elongation factor P (EF-P) OB domain
BF89_RS20310	PF09285	Elongation factor P, C-terminal
BF89_RS20310	PF08207	Elongation factor P (EF-P) KOW-like domain
BF89_RS20335	PF09548	Stage III sporulation protein AB (spore_III_AB)
BF89_RS20340	PF06686	Stage III sporulation protein AC/AD protein family
BF89_RS20345	PF06686	Stage III sporulation protein AC/AD protein family
BF89_RS20350	PF09546	Stage III sporulation protein AE (spore_III_AE)
BF89_RS20355	PF09581	Stage III sporulation protein AF (Spore_III_AF)
BF89_RS20365	PF12685	SpoIIIAH-like protein
BF89_RS20375	PF00364	Biotin-requiring enzyme
BF89_RS20380	PF02785	Biotin carboxylase C-terminal domain
BF89_RS20380	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF89_RS20380	PF00289	Biotin carboxylase, N-terminal domain
BF89_RS20385	PF03780	Asp23 family, cell envelope-related function
BF89_RS20390	PF01029	NusB family
BF89_RS20395	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
BF89_RS20395	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
BF89_RS20400	PF02601	Exonuclease VII, large subunit
BF89_RS20400	PF13742	OB-fold nucleic acid binding domain
BF89_RS20405	PF02609	Exonuclease VII small subunit
BF89_RS20410	PF00348	Polyprenyl synthetase
BF89_RS20415	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
BF89_RS20415	PF02780	Transketolase, C-terminal domain
BF89_RS20415	PF02779	Transketolase, pyrimidine binding domain
BF89_RS20420	PF01728	FtsJ-like methyltransferase
BF89_RS20420	PF01479	S4 domain
BF89_RS20425	PF02863	Arginine repressor, C-terminal domain
BF89_RS20425	PF01316	Arginine repressor, DNA binding domain
BF89_RS20430	PF13476	AAA domain
BF89_RS20435	PF05580	SpoIVB peptidase S55
BF89_RS20435	PF17820	PDZ domain
BF89_RS20440	PF00072	Response regulator receiver domain
BF89_RS20440	PF08769	Sporulation initiation factor Spo0A C terminal
BF89_RS20450	PF14174	YycC-like protein
BF89_RS20455	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF89_RS20465	PF00158	Sigma-54 interaction domain
BF89_RS20465	PF02954	Bacterial regulatory protein, Fis family
BF89_RS20465	PF00989	PAS fold
BF89_RS20475	PF01515	Phosphate acetyl/butaryl transferase
BF89_RS20480	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
BF89_RS20480	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BF89_RS20485	PF00871	Acetokinase family
BF89_RS20490	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS20490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS20495	PF00676	Dehydrogenase E1 component
BF89_RS20500	PF02779	Transketolase, pyrimidine binding domain
BF89_RS20500	PF02780	Transketolase, C-terminal domain
BF89_RS20505	PF02817	e3 binding domain
BF89_RS20505	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF89_RS20505	PF00364	Biotin-requiring enzyme
BF89_RS20515	PF01098	Cell cycle protein
BF89_RS20520	PF00293	NUDIX domain
BF89_RS20520	PF09297	NADH pyrophosphatase zinc ribbon domain
BF89_RS20525	PF11208	Protein of unknown function (DUF2992)
BF89_RS20530	PF06491	Disulphide isomerase
BF89_RS20540	PF00497	Bacterial extracellular solute-binding proteins, family 3
BF89_RS20545	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS20550	PF00005	ABC transporter
BF89_RS20555	PF11728	Putative aromatic acid exporter C-terminal domain
BF89_RS20555	PF06081	Aromatic acid exporter family member 1
BF89_RS20560	PF03734	L,D-transpeptidase catalytic domain
BF89_RS20575	PF13302	Acetyltransferase (GNAT) domain
BF89_RS20580	PF07687	Peptidase dimerisation domain
BF89_RS20580	PF01546	Peptidase family M20/M25/M40
BF89_RS20590	PF00817	impB/mucB/samB family
BF89_RS20590	PF11799	impB/mucB/samB family C-terminal domain
BF89_RS20590	PF11798	IMS family HHH motif
BF89_RS20600	PF00753	Metallo-beta-lactamase superfamily
BF89_RS20600	PF12706	Beta-lactamase superfamily domain
BF89_RS20610	PF03315	Serine dehydratase beta chain
BF89_RS20610	PF01842	ACT domain
BF89_RS20615	PF03313	Serine dehydratase alpha chain
BF89_RS20620	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF89_RS20620	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF89_RS20625	PF00753	Metallo-beta-lactamase superfamily
BF89_RS20630	PF00106	short chain dehydrogenase
BF89_RS20640	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF89_RS20640	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF89_RS20645	PF01960	ArgJ family
BF89_RS20650	PF00696	Amino acid kinase family
BF89_RS20655	PF00202	Aminotransferase class-III
BF89_RS20660	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BF89_RS20660	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BF89_RS20675	PF13404	AsnC-type helix-turn-helix domain
BF89_RS20675	PF01037	Lrp/AsnC ligand binding domain
BF89_RS20685	PF00149	Calcineurin-like phosphoesterase
BF89_RS20685	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS20690	PF03553	Na+/H+ antiporter family
BF89_RS20700	PF00202	Aminotransferase class-III
BF89_RS20710	PF00155	Aminotransferase class I and II
BF89_RS20715	PF08241	Methyltransferase domain
BF89_RS20715	PF12697	Alpha/beta hydrolase family
BF89_RS20720	PF13847	Methyltransferase domain
BF89_RS20725	PF04055	Radical SAM superfamily
BF89_RS20725	PF06968	Biotin and Thiamin Synthesis associated domain
BF89_RS20735	PF00885	6,7-dimethyl-8-ribityllumazine synthase
BF89_RS20740	PF00925	GTP cyclohydrolase II
BF89_RS20740	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
BF89_RS20745	PF00677	Lumazine binding domain
BF89_RS20750	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF89_RS20750	PF01872	RibD C-terminal domain
BF89_RS20760	PF10827	Protein of unknown function (DUF2552) 
BF89_RS20765	PF12146	Serine aminopeptidase, S33
BF89_RS20770	PF00583	Acetyltransferase (GNAT) family
BF89_RS20775	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS20780	PF13726	Na+-H+ antiporter family
BF89_RS20780	PF03553	Na+/H+ antiporter family
BF89_RS20785	PF12146	Serine aminopeptidase, S33
BF89_RS20795	PF00565	Staphylococcal nuclease homologue
BF89_RS20795	PF00149	Calcineurin-like phosphoesterase
BF89_RS20795	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS20795	PF00746	LPXTG cell wall anchor motif
BF89_RS20805	PF04229	GrpB protein
BF89_RS20805	PF13673	Acetyltransferase (GNAT) domain
BF89_RS20810	PF00248	Aldo/keto reductase family
BF89_RS20815	PF00248	Aldo/keto reductase family
BF89_RS20820	PF13072	Mother cell inhibitor of FtsZ
BF89_RS20825	PF00293	NUDIX domain
BF89_RS20835	PF01944	Stage II sporulation protein M
BF89_RS20840	PF01475	Ferric uptake regulator family
BF89_RS20845	PF14004	Protein of unknown function (DUF4227)
BF89_RS20850	PF00589	Phage integrase family
BF89_RS20850	PF02899	Phage integrase, N-terminal SAM-like domain
BF89_RS20860	PF01676	Metalloenzyme superfamily
BF89_RS20865	PF01048	Phosphorylase superfamily
BF89_RS20870	PF02885	Glycosyl transferase family, helical bundle domain
BF89_RS20870	PF00591	Glycosyl transferase family, a/b domain
BF89_RS20870	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
BF89_RS20875	PF01544	CorA-like Mg2+ transporter protein
BF89_RS20880	PF00860	Permease family
BF89_RS20890	PF01047	MarR family
BF89_RS20910	PF00005	ABC transporter
BF89_RS20915	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS20920	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS20920	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS20925	PF01740	STAS domain
BF89_RS20930	PF13581	Histidine kinase-like ATPase domain
BF89_RS20935	PF04542	Sigma-70 region 2 
BF89_RS20935	PF04545	Sigma-70, region 4
BF89_RS20935	PF04539	Sigma-70 region 3
BF89_RS20940	PF00209	Sodium:neurotransmitter symporter family
BF89_RS20950	PF12164	Stage V sporulation protein AA
BF89_RS20955	PF13782	Stage V sporulation protein AB
BF89_RS20960	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF89_RS20965	PF07451	Stage V sporulation protein AD (SpoVAD)
BF89_RS20970	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
BF89_RS20975	PF14097	Stage V sporulation protein AE1
BF89_RS20980	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS20990	PF06207	Protein of unknown function (DUF1002)
BF89_RS20995	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
BF89_RS21005	PF00583	Acetyltransferase (GNAT) family
BF89_RS21020	PF02616	Segregation and condensation protein ScpA
BF89_RS21030	PF04079	Segregation and condensation complex subunit ScpB
BF89_RS21040	PF01979	Amidohydrolase family
BF89_RS21045	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
BF89_RS21050	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS21050	PF07702	UTRA domain
BF89_RS21060	PF03123	CAT RNA binding domain
BF89_RS21060	PF00874	PRD domain
BF89_RS21065	PF02378	Phosphotransferase system, EIIC 
BF89_RS21065	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BF89_RS21065	PF00367	phosphotransferase system, EIIB
BF89_RS21070	PF00381	PTS HPr component phosphorylation site
BF89_RS21075	PF02896	PEP-utilising enzyme, TIM barrel domain
BF89_RS21075	PF00391	PEP-utilising enzyme, mobile domain
BF89_RS21075	PF05524	PEP-utilising enzyme, N-terminal
BF89_RS21090	PF00881	Nitroreductase family
BF89_RS21095	PF08448	PAS fold
BF89_RS21095	PF00990	Diguanylate cyclase, GGDEF domain
BF89_RS21115	PF03079	ARD/ARD' family
BF89_RS21120	PF00596	Class II Aldolase and Adducin N-terminal domain
BF89_RS21130	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
BF89_RS21130	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
BF89_RS21135	PF00155	Aminotransferase class I and II
BF89_RS21140	PF00795	Carbon-nitrogen hydrolase
BF89_RS21145	PF01636	Phosphotransferase enzyme family
BF89_RS21150	PF01008	Initiation factor 2 subunit family
BF89_RS21165	PF03551	Transcriptional regulator PadR-like family
BF89_RS21200	PF00293	NUDIX domain
BF89_RS21205	PF00108	Thiolase, N-terminal domain
BF89_RS21205	PF02803	Thiolase, C-terminal domain
BF89_RS21245	PF03459	TOBE domain
BF89_RS21245	PF17912	MalK OB fold domain
BF89_RS21245	PF00005	ABC transporter
BF89_RS21250	PF00128	Alpha amylase, catalytic domain
BF89_RS21250	PF16657	Maltogenic Amylase, C-terminal domain
BF89_RS21255	PF16657	Maltogenic Amylase, C-terminal domain
BF89_RS21255	PF02903	Alpha amylase, N-terminal ig-like domain
BF89_RS21255	PF00128	Alpha amylase, catalytic domain
BF89_RS21260	PF13416	Bacterial extracellular solute-binding protein
BF89_RS21265	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS21270	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS21275	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS21275	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
BF89_RS21280	PF00155	Aminotransferase class I and II
BF89_RS21290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS21290	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS21300	PF14040	Deoxyribonuclease NucA/NucB
BF89_RS21310	PF08267	Cobalamin-independent synthase, N-terminal domain
BF89_RS21310	PF01717	Cobalamin-independent synthase, Catalytic domain
BF89_RS21325	PF07690	Major Facilitator Superfamily
BF89_RS21355	PF14177	YkyB-like protein
BF89_RS21360	PF02541	Ppx/GppA phosphatase family
BF89_RS21375	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BF89_RS21375	PF00149	Calcineurin-like phosphoesterase
BF89_RS21385	PF10388	EAL-domain associated signalling protein domain
BF89_RS21385	PF00563	EAL domain
BF89_RS21400	PF08796	Protein of unknown function (DUF1797)
BF89_RS21410	PF04308	Ribonuclease H-like
BF89_RS21425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS21425	PF03466	LysR substrate binding domain
BF89_RS21430	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS21430	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
BF89_RS21430	PF14602	Hexapeptide repeat of succinyl-transferase
BF89_RS21435	PF01546	Peptidase family M20/M25/M40
BF89_RS21435	PF07687	Peptidase dimerisation domain
BF89_RS21445	PF02254	TrkA-N domain
BF89_RS21445	PF02080	TrkA-C domain
BF89_RS21450	PF17770	Ribonuclease J C-terminal domain
BF89_RS21450	PF00753	Metallo-beta-lactamase superfamily
BF89_RS21450	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF89_RS21455	PF07288	Protein of unknown function (DUF1447)
BF89_RS21465	PF01327	Polypeptide deformylase
BF89_RS21475	PF00676	Dehydrogenase E1 component
BF89_RS21480	PF02780	Transketolase, C-terminal domain
BF89_RS21480	PF02779	Transketolase, pyrimidine binding domain
BF89_RS21485	PF00364	Biotin-requiring enzyme
BF89_RS21485	PF02817	e3 binding domain
BF89_RS21485	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF89_RS21490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS21490	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS21530	PF01276	Orn/Lys/Arg decarboxylase, major domain
BF89_RS21530	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
BF89_RS21535	PF05256	Uncharacterised protein family (UPF0223)
BF89_RS21540	PF06335	Protein of unknown function (DUF1054)
BF89_RS21550	PF00459	Inositol monophosphatase family
BF89_RS21560	PF14492	Elongation Factor G, domain II
BF89_RS21560	PF00679	Elongation factor G C-terminus
BF89_RS21560	PF03144	Elongation factor Tu domain 2
BF89_RS21560	PF00009	Elongation factor Tu GTP binding domain
BF89_RS21565	PF14036	YlaH-like protein
BF89_RS21575	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
BF89_RS21585	PF02562	PhoH-like protein
BF89_RS21585	PF13638	PIN domain
BF89_RS21595	PF07408	Protein of unknown function (DUF1507)
BF89_RS21600	PF01098	Cell cycle protein
BF89_RS21605	PF00682	HMGL-like
BF89_RS21605	PF00364	Biotin-requiring enzyme
BF89_RS21605	PF02785	Biotin carboxylase C-terminal domain
BF89_RS21605	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF89_RS21605	PF00289	Biotin carboxylase, N-terminal domain
BF89_RS21605	PF02436	Conserved carboxylase domain
BF89_RS21610	PF02628	Cytochrome oxidase assembly protein
BF89_RS21615	PF01040	UbiA prenyltransferase family
BF89_RS21620	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
BF89_RS21620	PF00034	Cytochrome c
BF89_RS21620	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
BF89_RS21625	PF00115	Cytochrome C and Quinol oxidase polypeptide I
BF89_RS21630	PF00510	Cytochrome c oxidase subunit III
BF89_RS21635	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
BF89_RS21640	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
BF89_RS21645	PF00795	Carbon-nitrogen hydrolase
BF89_RS21650	PF08868	YugN-like family
BF89_RS21655	PF14504	CAP-associated N-terminal
BF89_RS21655	PF00188	Cysteine-rich secretory protein family
BF89_RS21660	PF14071	Putative coat protein
BF89_RS21665	PF14003	YlbE-like protein
BF89_RS21670	PF00300	Histidine phosphatase superfamily (branch 1)
BF89_RS21675	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF89_RS21680	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
BF89_RS21695	PF01467	Cytidylyltransferase-like
BF89_RS21700	PF07670	Nucleoside recognition
BF89_RS21705	PF01734	Patatin-like phospholipase
BF89_RS21710	PF05362	Lon protease (S16) C-terminal proteolytic domain
BF89_RS21710	PF13180	PDZ domain
BF89_RS21715	PF05636	HIGH Nucleotidyl Transferase
BF89_RS21720	PF00589	Phage integrase family
BF89_RS21720	PF14659	Phage integrase, N-terminal SAM-like domain
BF89_RS21735	PF01381	Helix-turn-helix
BF89_RS21745	PF01381	Helix-turn-helix
BF89_RS21775	PF01695	IstB-like ATP binding protein
BF89_RS21775	PF07319	Primosomal protein DnaI N-terminus
BF89_RS21810	PF00692	dUTPase
BF89_RS21825	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS21880	PF00589	Phage integrase family
BF89_RS21885	PF10137	Predicted nucleotide-binding protein containing TIR-like domain
BF89_RS21905	PF03354	Phage Terminase 
BF89_RS21915	PF00574	Clp protease
BF89_RS22000	PF05105	Bacteriophage holin family 
BF89_RS22005	PF12123	N-acetylmuramoyl-l-alanine amidase
BF89_RS22005	PF01510	N-acetylmuramoyl-L-alanine amidase
BF89_RS22050	PF02620	Large ribosomal RNA subunit accumulation protein YceD
BF89_RS22055	PF01783	Ribosomal L32p protein family
BF89_RS22065	PF00583	Acetyltransferase (GNAT) family
BF89_RS22070	PF02558	Ketopantoate reductase PanE/ApbA
BF89_RS22070	PF08546	Ketopantoate reductase PanE/ApbA C terminal
BF89_RS22075	PF10079	Bacillithiol biosynthesis BshC 
BF89_RS22080	PF01795	MraW methylase family
BF89_RS22085	PF04977	Septum formation initiator
BF89_RS22090	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS22090	PF03793	PASTA domain
BF89_RS22090	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS22095	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS22095	PF03793	PASTA domain
BF89_RS22095	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS22100	PF08245	Mur ligase middle domain
BF89_RS22100	PF01225	Mur ligase family, catalytic domain
BF89_RS22100	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS22105	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
BF89_RS22105	PF00953	Glycosyl transferase family 4
BF89_RS22110	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS22110	PF08245	Mur ligase middle domain
BF89_RS22115	PF01098	Cell cycle protein
BF89_RS22120	PF03033	Glycosyltransferase family 28 N-terminal domain
BF89_RS22120	PF04101	Glycosyltransferase family 28 C-terminal domain
BF89_RS22125	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
BF89_RS22125	PF01565	FAD binding domain 
BF89_RS22130	PF08478	POTRA domain, FtsQ-type
BF89_RS22130	PF03799	Cell division protein FtsQ
BF89_RS22135	PF02491	SHS2 domain inserted in FTSA
BF89_RS22140	PF00091	Tubulin/FtsZ family, GTPase domain
BF89_RS22140	PF12327	FtsZ family, C-terminal domain
BF89_RS22145	PF03419	Sporulation factor SpoIIGA 
BF89_RS22150	PF04545	Sigma-70, region 4
BF89_RS22150	PF04542	Sigma-70 region 2 
BF89_RS22155	PF04545	Sigma-70, region 4
BF89_RS22155	PF04542	Sigma-70 region 2 
BF89_RS22155	PF04539	Sigma-70 region 3
BF89_RS22160	PF05239	PRC-barrel domain
BF89_RS22165	PF02578	Multi-copper polyphenol oxidoreductase laccase
BF89_RS22170	PF01168	Alanine racemase, N-terminal domain
BF89_RS22175	PF04472	Cell division protein SepF
BF89_RS22180	PF02325	YGGT family
BF89_RS22185	PF01479	S4 domain
BF89_RS22185	PF17774	Putative RNA-binding domain in YlmH
BF89_RS22190	PF05103	DivIVA protein
BF89_RS22195	PF06827	Zinc finger found in FPG and IleRS
BF89_RS22195	PF08264	Anticodon-binding domain of tRNA
BF89_RS22195	PF00133	tRNA synthetases class I (I, L, M and V)
BF89_RS22205	PF01252	Signal peptidase (SPase) II
BF89_RS22210	PF00849	RNA pseudouridylate synthase
BF89_RS22210	PF01479	S4 domain
BF89_RS22215	PF00156	Phosphoribosyl transferase domain
BF89_RS22220	PF00860	Permease family
BF89_RS22225	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
BF89_RS22225	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
BF89_RS22230	PF01979	Amidohydrolase family
BF89_RS22235	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
BF89_RS22235	PF00117	Glutamine amidotransferase class-I
BF89_RS22240	PF02142	MGS-like domain
BF89_RS22240	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BF89_RS22240	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
BF89_RS22245	PF00175	Oxidoreductase NAD-binding domain 
BF89_RS22245	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
BF89_RS22250	PF01180	Dihydroorotate dehydrogenase
BF89_RS22255	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
BF89_RS22260	PF00156	Phosphoribosyl transferase domain
BF89_RS22290	PF00557	Metallopeptidase family M24
BF89_RS22290	PF01321	Creatinase/Prolidase N-terminal domain
BF89_RS22295	PF05670	NFACT protein RNA binding domain
BF89_RS22300	PF00690	Cation transporter/ATPase, N-terminus
BF89_RS22300	PF00689	Cation transporting ATPase, C-terminus
BF89_RS22305	PF03755	YicC-like family, N-terminal region 
BF89_RS22305	PF08340	Domain of unknown function (DUF1732)
BF89_RS22310	PF04025	Domain of unknown function (DUF370)
BF89_RS22315	PF00625	Guanylate kinase
BF89_RS22320	PF01192	RNA polymerase Rpb6 
BF89_RS22325	PF02441	Flavoprotein
BF89_RS22325	PF04127	DNA / pantothenate metabolism flavoprotein
BF89_RS22330	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
BF89_RS22330	PF04851	Type III restriction enzyme, res subunit
BF89_RS22330	PF18074	Primosomal protein N C-terminal domain
BF89_RS22330	PF17764	3′ DNA-binding domain (3′BD)
BF89_RS22330	PF00271	Helicase conserved C-terminal domain
BF89_RS22335	PF01327	Polypeptide deformylase
BF89_RS22340	PF02911	Formyl transferase, C-terminal domain
BF89_RS22340	PF00551	Formyl transferase
BF89_RS22345	PF01189	16S rRNA methyltransferase RsmB/F
BF89_RS22345	PF01029	NusB family
BF89_RS22350	PF04055	Radical SAM superfamily
BF89_RS22360	PF03793	PASTA domain
BF89_RS22360	PF00069	Protein kinase domain
BF89_RS22365	PF03193	RsgA GTPase
BF89_RS22365	PF16745	RsgA N-terminal domain
BF89_RS22370	PF00834	Ribulose-phosphate 3 epimerase family
BF89_RS22375	PF04263	Thiamin pyrophosphokinase, catalytic domain
BF89_RS22375	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
BF89_RS22380	PF08183	Stage V sporulation protein family
BF89_RS22385	PF00830	Ribosomal L28 family
BF89_RS22390	PF03780	Asp23 family, cell envelope-related function
BF89_RS22395	PF02734	DAK2 domain
BF89_RS22395	PF13684	Dihydroxyacetone kinase family
BF89_RS22400	PF00271	Helicase conserved C-terminal domain
BF89_RS22400	PF00270	DEAD/DEAH box helicase
BF89_RS22400	PF17191	RecG wedge domain
BF89_RS22405	PF03061	Thioesterase superfamily
BF89_RS22410	PF02504	Fatty acid synthesis protein
BF89_RS22415	PF00698	Acyl transferase domain
BF89_RS22425	PF00550	Phosphopantetheine attachment site
BF89_RS22430	PF00035	Double-stranded RNA binding motif
BF89_RS22430	PF14622	Ribonuclease-III-like
BF89_RS22435	PF06470	SMC proteins Flexible Hinge Domain
BF89_RS22435	PF02463	RecF/RecN/SMC N terminal domain
BF89_RS22440	PF02881	SRP54-type protein, helical bundle domain
BF89_RS22440	PF00448	SRP54-type protein, GTPase domain
BF89_RS22445	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
BF89_RS22450	PF02978	Signal peptide binding domain
BF89_RS22450	PF02881	SRP54-type protein, helical bundle domain
BF89_RS22450	PF00448	SRP54-type protein, GTPase domain
BF89_RS22455	PF00886	Ribosomal protein S16
BF89_RS22465	PF05239	PRC-barrel domain
BF89_RS22465	PF01782	RimM N-terminal domain
BF89_RS22470	PF01746	tRNA (Guanine-1)-methyltransferase
BF89_RS22475	PF01245	Ribosomal protein L19
BF89_RS22480	PF10502	Signal peptidase, peptidase S26 
BF89_RS22485	PF01926	50S ribosome-binding GTPase
BF89_RS22490	PF01351	Ribonuclease HII
BF89_RS22495	PF08442	ATP-grasp domain
BF89_RS22495	PF00549	CoA-ligase
BF89_RS22500	PF02629	CoA binding domain
BF89_RS22500	PF00549	CoA-ligase
BF89_RS22510	PF01751	Toprim domain
BF89_RS22510	PF01131	DNA topoisomerase
BF89_RS22510	PF01396	Topoisomerase DNA binding C4 zinc finger
BF89_RS22515	PF01134	Glucose inhibited division protein A
BF89_RS22520	PF00589	Phage integrase family
BF89_RS22520	PF02899	Phage integrase, N-terminal SAM-like domain
BF89_RS22525	PF00227	Proteasome subunit
BF89_RS22530	PF10431	C-terminal, D2-small domain, of ClpB protein 
BF89_RS22530	PF07724	AAA domain (Cdc48 subfamily)
BF89_RS22530	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS22535	PF06018	CodY GAF-like domain
BF89_RS22535	PF08222	CodY helix-turn-helix domain
BF89_RS22540	PF00318	Ribosomal protein S2
BF89_RS22545	PF00889	Elongation factor TS
BF89_RS22550	PF00696	Amino acid kinase family
BF89_RS22555	PF01765	Ribosome recycling factor
BF89_RS22560	PF01255	Putative undecaprenyl diphosphate synthase
BF89_RS22570	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BF89_RS22570	PF13288	DXP reductoisomerase C-terminal domain
BF89_RS22570	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BF89_RS22575	PF17820	PDZ domain
BF89_RS22575	PF02163	Peptidase family M50
BF89_RS22580	PF04073	Aminoacyl-tRNA editing domain
BF89_RS22580	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
BF89_RS22580	PF03129	Anticodon binding domain
BF89_RS22585	PF02811	PHP domain
BF89_RS22585	PF11490	DNA polymerase III polC-type N-terminus II
BF89_RS22585	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF89_RS22585	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF89_RS22585	PF14579	Helix-hairpin-helix motif
BF89_RS22585	PF00929	Exonuclease
BF89_RS22585	PF14480	DNA polymerase III polC-type N-terminus I
BF89_RS22590	PF17384	RimP C-terminal SH3 domain
BF89_RS22590	PF02576	RimP N-terminal domain
BF89_RS22595	PF13184	NusA-like KH domain
BF89_RS22595	PF08529	NusA N-terminal domain
BF89_RS22595	PF00575	S1 RNA binding domain
BF89_RS22600	PF04296	Protein of unknown function (DUF448)
BF89_RS22605	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
BF89_RS22610	PF04760	Translation initiation factor IF-2, N-terminal region
BF89_RS22610	PF11987	Translation-initiation factor 2
BF89_RS22610	PF00009	Elongation factor Tu GTP binding domain
BF89_RS22615	PF04456	Protein of unknown function (DUF503)
BF89_RS22620	PF02033	Ribosome-binding factor A
BF89_RS22625	PF16198	tRNA pseudouridylate synthase B C-terminal domain
BF89_RS22625	PF01509	TruB family pseudouridylate synthase (N terminal domain)
BF89_RS22630	PF01687	Riboflavin kinase
BF89_RS22630	PF06574	FAD synthetase
BF89_RS22635	PF00312	Ribosomal protein S15
BF89_RS22640	PF01138	3' exoribonuclease family, domain 1
BF89_RS22640	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
BF89_RS22640	PF03725	3' exoribonuclease family, domain 2
BF89_RS22640	PF00575	S1 RNA binding domain
BF89_RS22640	PF00013	KH domain
BF89_RS22645	PF01522	Polysaccharide deacetylase
BF89_RS22650	PF05193	Peptidase M16 inactive domain
BF89_RS22650	PF00675	Insulinase (Peptidase family M16)
BF89_RS22655	PF05239	PRC-barrel domain
BF89_RS22660	PF16924	Dipicolinate synthase subunit A N-terminal domain
BF89_RS22660	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
BF89_RS22665	PF02441	Flavoprotein
BF89_RS22670	PF01118	Semialdehyde dehydrogenase, NAD binding domain
BF89_RS22670	PF02774	Semialdehyde dehydrogenase, dimerisation domain
BF89_RS22675	PF00696	Amino acid kinase family
BF89_RS22675	PF13840	ACT domain 
BF89_RS22680	PF00701	Dihydrodipicolinate synthetase family
BF89_RS22690	PF17770	Ribonuclease J C-terminal domain
BF89_RS22690	PF00753	Metallo-beta-lactamase superfamily
BF89_RS22690	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
BF89_RS22695	PF00574	Clp protease
BF89_RS22700	PF14035	YlzJ-like protein
BF89_RS22705	PF17854	FtsK alpha domain
BF89_RS22705	PF01580	FtsK/SpoIIIE family
BF89_RS22705	PF09397	Ftsk gamma domain
BF89_RS22710	PF07702	UTRA domain
BF89_RS22710	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS22715	PF02608	ABC transporter substrate-binding protein PnrA-like
BF89_RS22720	PF00005	ABC transporter
BF89_RS22725	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS22730	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS22735	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS22740	PF05193	Peptidase M16 inactive domain
BF89_RS22745	PF05193	Peptidase M16 inactive domain
BF89_RS22745	PF00675	Insulinase (Peptidase family M16)
BF89_RS22755	PF11588	Protein of unknown function (DUF3243)
BF89_RS22760	PF11868	Protein of unknown function (DUF3388)
BF89_RS22765	PF13464	Domain of unknown function (DUF4115)
BF89_RS22770	PF01066	CDP-alcohol phosphatidyltransferase
BF89_RS22775	PF00994	Probable molybdopterin binding domain
BF89_RS22775	PF02464	Competence-damaged protein
BF89_RS22775	PF18146	Damage-inducible protein CinA KH domain
BF89_RS22780	PF00154	recA bacterial DNA recombination protein
BF89_RS22790	PF01966	HD domain
BF89_RS22790	PF00013	KH domain
BF89_RS22790	PF12072	Domain of unknown function (DUF3552)
BF89_RS22795	PF13277	YmdB-like protein
BF89_RS22800	PF04232	Stage V sporulation protein S (SpoVS)
BF89_RS22805	PF01244	Membrane dipeptidase (Peptidase family M19)
BF89_RS22810	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
BF89_RS22810	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
BF89_RS22810	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
BF89_RS22815	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
BF89_RS22820	PF04055	Radical SAM superfamily
BF89_RS22820	PF01938	TRAM domain
BF89_RS22820	PF00919	Uncharacterized protein family UPF0004
BF89_RS22825	PF06133	Control of competence regulator ComK, YlbF/YmcA
BF89_RS22830	PF10628	Outer spore coat protein E (CotE)
BF89_RS22835	PF05192	MutS domain III
BF89_RS22835	PF05190	MutS family domain IV
BF89_RS22835	PF05188	MutS domain II
BF89_RS22835	PF00488	MutS domain V
BF89_RS22835	PF01624	MutS domain I
BF89_RS22840	PF01119	DNA mismatch repair protein, C-terminal domain
BF89_RS22840	PF08676	MutL C terminal dimerisation domain
BF89_RS22845	PF00005	ABC transporter
BF89_RS22860	PF00072	Response regulator receiver domain
BF89_RS22860	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS22865	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS22865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS22870	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
BF89_RS22880	PF00350	Dynamin family
BF89_RS22885	PF00884	Sulfatase
BF89_RS22890	PF03275	UDP-galactopyranose mutase
BF89_RS22895	PF07486	Cell Wall Hydrolase
BF89_RS22900	PF00082	Subtilase family
BF89_RS22905	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
BF89_RS22915	PF02585	GlcNAc-PI de-N-acetylase
BF89_RS22920	PF00364	Biotin-requiring enzyme
BF89_RS22920	PF00561	alpha/beta hydrolase fold
BF89_RS22925	PF00155	Aminotransferase class I and II
BF89_RS22925	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS22930	PF03788	LrgA family
BF89_RS22935	PF04172	LrgB-like family 
BF89_RS22940	PF10787	Uncharacterised protein from bacillus cereus group
BF89_RS22960	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS22965	PF00561	alpha/beta hydrolase fold
BF89_RS22985	PF07687	Peptidase dimerisation domain
BF89_RS22985	PF01546	Peptidase family M20/M25/M40
BF89_RS22990	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
BF89_RS22990	PF00730	HhH-GPD superfamily base excision DNA repair protein
BF89_RS22995	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
BF89_RS22995	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
BF89_RS23000	PF12833	Helix-turn-helix domain
BF89_RS23000	PF02805	Metal binding domain of Ada
BF89_RS23015	PF01497	Periplasmic binding protein
BF89_RS23020	PF01032	FecCD transport family
BF89_RS23025	PF01032	FecCD transport family
BF89_RS23030	PF00005	ABC transporter
BF89_RS23035	PF00756	Putative esterase
BF89_RS23045	PF02583	Metal-sensitive transcriptional repressor
BF89_RS23050	PF00403	Heavy-metal-associated domain
BF89_RS23055	PF00403	Heavy-metal-associated domain
BF89_RS23060	PF00216	Bacterial DNA-binding protein
BF89_RS23065	PF01226	Formate/nitrite transporter
BF89_RS23070	PF10518	TAT (twin-arginine translocation) pathway signal sequence
BF89_RS23070	PF00149	Calcineurin-like phosphoesterase
BF89_RS23075	PF00041	Fibronectin type III domain
BF89_RS23075	PF00704	Glycosyl hydrolases family 18
BF89_RS23080	PF00324	Amino acid permease
BF89_RS23095	PF04238	Protein of unknown function (DUF420)
BF89_RS23105	PF08220	DeoR-like helix-turn-helix domain
BF89_RS23105	PF00455	DeoR C terminal sensor domain
BF89_RS23110	PF00294	pfkB family carbohydrate kinase
BF89_RS23115	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
BF89_RS23115	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BF89_RS23120	PF06725	3D domain
BF89_RS23120	PF01476	LysM domain
BF89_RS23135	PF17209	Hfq protein
BF89_RS23150	PF17866	AAA lid domain
BF89_RS23150	PF00004	ATPase family associated with various cellular activities (AAA)
BF89_RS23155	PF03458	UPF0126 domain
BF89_RS23160	PF01926	50S ribosome-binding GTPase
BF89_RS23160	PF16360	GTP-binding GTPase Middle Region
BF89_RS23160	PF13167	GTP-binding GTPase N-terminal
BF89_RS23165	PF06838	Methionine gamma-lyase 
BF89_RS23170	PF13411	MerR HTH family regulatory protein
BF89_RS23175	PF00120	Glutamine synthetase, catalytic domain
BF89_RS23175	PF03951	Glutamine synthetase, beta-Grasp domain
BF89_RS23180	PF00589	Phage integrase family
BF89_RS23180	PF02899	Phage integrase, N-terminal SAM-like domain
BF89_RS23200	PF01381	Helix-turn-helix
BF89_RS23275	PF00145	C-5 cytosine-specific DNA methylase
BF89_RS23280	PF02511	Thymidylate synthase complementing protein
BF89_RS23325	PF08281	Sigma-70, region 4
BF89_RS23485	PF05105	Bacteriophage holin family 
BF89_RS23490	PF01471	Putative peptidoglycan binding domain
BF89_RS23490	PF01476	LysM domain
BF89_RS23490	PF01510	N-acetylmuramoyl-L-alanine amidase
BF89_RS23525	PF03551	Transcriptional regulator PadR-like family
BF89_RS23540	PF00717	Peptidase S24-like
BF89_RS23540	PF01726	LexA DNA binding domain
BF89_RS23545	PF00239	Resolvase, N terminal domain
BF89_RS23550	PF05979	Bacterial protein of unknown function (DUF896)
BF89_RS23555	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS23555	PF00149	Calcineurin-like phosphoesterase
BF89_RS23570	PF00005	ABC transporter
BF89_RS23575	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS23580	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS23590	PF07282	Putative transposase DNA-binding domain
BF89_RS23590	PF01385	Probable transposase
BF89_RS23590	PF12323	Helix-turn-helix domain
BF89_RS23595	PF02780	Transketolase, C-terminal domain
BF89_RS23595	PF02779	Transketolase, pyrimidine binding domain
BF89_RS23595	PF00456	Transketolase, thiamine diphosphate binding domain
BF89_RS23600	PF10747	Sporulation inhibitor of replication protein SirA 
BF89_RS23605	PF03672	Uncharacterised protein family (UPF0154)
BF89_RS23610	PF00664	ABC transporter transmembrane region
BF89_RS23610	PF00005	ABC transporter
BF89_RS23615	PF00005	ABC transporter
BF89_RS23615	PF00664	ABC transporter transmembrane region
BF89_RS23630	PF01471	Putative peptidoglycan binding domain
BF89_RS23630	PF01510	N-acetylmuramoyl-L-alanine amidase
BF89_RS23640	PF01925	Sulfite exporter TauE/SafE
BF89_RS23655	PF04172	LrgB-like family 
BF89_RS23660	PF03788	LrgA family
BF89_RS23665	PF03466	LysR substrate binding domain
BF89_RS23665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS23675	PF02683	Cytochrome C biogenesis protein transmembrane region
BF89_RS23680	PF07301	Protein of unknown function (DUF1453)
BF89_RS23710	PF11084	Protein of unknown function (DUF2621)
BF89_RS23735	PF01209	ubiE/COQ5 methyltransferase family
BF89_RS23740	PF09021	HutP
BF89_RS23745	PF00221	Aromatic amino acid lyase
BF89_RS23750	PF17392	Urocanase C-terminal domain
BF89_RS23750	PF17391	Urocanase N-terminal domain
BF89_RS23750	PF01175	Urocanase Rossmann-like domain
BF89_RS23755	PF01979	Amidohydrolase family
BF89_RS23760	PF00491	Arginase family
BF89_RS23765	PF02559	CarD-like/TRCF domain
BF89_RS23770	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
BF89_RS23775	PF01645	Conserved region in glutamate synthase
BF89_RS23780	PF00474	Sodium:solute symporter family
BF89_RS23785	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS23790	PF01738	Dienelactone hydrolase family
BF89_RS23795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS23795	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS23795	PF00989	PAS fold
BF89_RS23795	PF13426	PAS domain
BF89_RS23795	PF13188	PAS domain
BF89_RS23805	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS23805	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS23835	PF05532	CsbD-like
BF89_RS23850	PF00501	AMP-binding enzyme
BF89_RS23850	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS23855	PF02632	BioY family
BF89_RS23860	PF00501	AMP-binding enzyme
BF89_RS23860	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS23865	PF02803	Thiolase, C-terminal domain
BF89_RS23865	PF00108	Thiolase, N-terminal domain
BF89_RS23875	PF00293	NUDIX domain
BF89_RS23875	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS23880	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
BF89_RS23880	PF02272	DHHA1 domain
BF89_RS23880	PF01411	tRNA synthetases class II (A)
BF89_RS23890	PF07690	Major Facilitator Superfamily
BF89_RS23910	PF01522	Polysaccharide deacetylase
BF89_RS23920	PF00330	Aconitase family (aconitate hydratase)
BF89_RS23920	PF00694	Aconitase C-terminal domain
BF89_RS23925	PF03412	Peptidase C39 family
BF89_RS23925	PF00005	ABC transporter
BF89_RS23925	PF00664	ABC transporter transmembrane region
BF89_RS23935	PF00578	AhpC/TSA family
BF89_RS23940	PF14579	Helix-hairpin-helix motif
BF89_RS23940	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
BF89_RS23940	PF07733	Bacterial DNA polymerase III alpha NTPase domain
BF89_RS23940	PF02811	PHP domain
BF89_RS23940	PF01336	OB-fold nucleic acid binding domain
BF89_RS23940	PF00929	Exonuclease
BF89_RS23940	PF11490	DNA polymerase III polC-type N-terminus II
BF89_RS23945	PF13040	Fur-regulated basic protein B
BF89_RS23950	PF08177	Small acid-soluble spore protein N family
BF89_RS23960	PF00704	Glycosyl hydrolases family 18
BF89_RS23960	PF01476	LysM domain
BF89_RS23965	PF03061	Thioesterase superfamily
BF89_RS23970	PF01521	Iron-sulphur cluster biosynthesis
BF89_RS23975	PF02660	Glycerol-3-phosphate acyltransferase
BF89_RS23980	PF03477	ATP cone domain
BF89_RS23980	PF13597	Anaerobic ribonucleoside-triphosphate reductase
BF89_RS23985	PF04055	Radical SAM superfamily
BF89_RS23990	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS23990	PF00072	Response regulator receiver domain
BF89_RS23995	PF13180	PDZ domain
BF89_RS24000	PF13380	CoA binding domain
BF89_RS24010	PF00204	DNA gyrase B
BF89_RS24010	PF00986	DNA gyrase B subunit, carboxyl terminus
BF89_RS24010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS24010	PF01751	Toprim domain
BF89_RS24015	PF00521	DNA gyrase/topoisomerase IV, subunit A
BF89_RS24015	PF03989	DNA gyrase C-terminal domain, beta-propeller
BF89_RS24020	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF89_RS24020	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF89_RS24030	PF13732	Domain of unknown function (DUF4162)
BF89_RS24030	PF00005	ABC transporter
BF89_RS24055	PF08281	Sigma-70, region 4
BF89_RS24055	PF04542	Sigma-70 region 2 
BF89_RS24065	PF03816	Cell envelope-related transcriptional attenuator domain
BF89_RS24070	PF00375	Sodium:dicarboxylate symporter family
BF89_RS24075	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS24080	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS24085	PF08241	Methyltransferase domain
BF89_RS24125	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS24140	PF07849	Protein of unknown function (DUF1641)
BF89_RS24145	PF10057	Uncharacterized conserved protein (DUF2294)
BF89_RS24150	PF02634	FdhD/NarQ family
BF89_RS24155	PF06463	Molybdenum Cofactor Synthesis C
BF89_RS24155	PF04055	Radical SAM superfamily
BF89_RS24160	PF01226	Formate/nitrite transporter
BF89_RS24165	PF00899	ThiF family
BF89_RS24170	PF03453	MoeA N-terminal region (domain I and II)
BF89_RS24170	PF03454	MoeA C-terminal region (domain IV)
BF89_RS24170	PF00994	Probable molybdopterin binding domain
BF89_RS24175	PF02391	MoaE protein
BF89_RS24185	PF10609	NUBPL iron-transfer P-loop NTPase
BF89_RS24200	PF06961	Protein of unknown function (DUF1294)
BF89_RS24205	PF00892	EamA-like transporter family
BF89_RS24210	PF02681	Divergent PAP2 family
BF89_RS24215	PF13243	Squalene-hopene cyclase C-terminal domain
BF89_RS24215	PF13249	Squalene-hopene cyclase N-terminal domain
BF89_RS24220	PF14151	YfhD-like protein
BF89_RS24230	PF00171	Aldehyde dehydrogenase family
BF89_RS24240	PF00474	Sodium:solute symporter family
BF89_RS24245	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF89_RS24265	PF00106	short chain dehydrogenase
BF89_RS24275	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS24285	PF00293	NUDIX domain
BF89_RS24295	PF00258	Flavodoxin
BF89_RS24305	PF00313	'Cold-shock' DNA-binding domain
BF89_RS24325	PF13039	Protein of unknown function (DUF3900)
BF89_RS24325	PF13037	Domain of unknown function (DUF3898)
BF89_RS24335	PF04294	VanW like protein
BF89_RS24340	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS24350	PF02308	MgtC family
BF89_RS24355	PF08453	Peptidase family M9 N-terminal
BF89_RS24355	PF01752	Collagenase
BF89_RS24355	PF18496	Collagenase G catalytic helper subdomain
BF89_RS24360	PF00378	Enoyl-CoA hydratase/isomerase
BF89_RS24365	PF00535	Glycosyl transferase family 2
BF89_RS24370	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
BF89_RS24375	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS24395	PF01565	FAD binding domain 
BF89_RS24395	PF02913	FAD linked oxidases, C-terminal domain
BF89_RS24400	PF01758	Sodium Bile acid symporter family
BF89_RS24415	PF04299	Putative FMN-binding domain
BF89_RS24430	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
BF89_RS24435	PF00107	Zinc-binding dehydrogenase
BF89_RS24435	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS24440	PF01022	Bacterial regulatory protein, arsR family
BF89_RS24445	PF01494	FAD binding domain
BF89_RS24465	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF89_RS24480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS24480	PF03466	LysR substrate binding domain
BF89_RS24485	PF07690	Major Facilitator Superfamily
BF89_RS24495	PF00144	Beta-lactamase
BF89_RS24500	PF08439	Oligopeptidase F
BF89_RS24500	PF01432	Peptidase family M3
BF89_RS24505	PF00797	N-acetyltransferase
BF89_RS24520	PF00488	MutS domain V
BF89_RS24520	PF01713	Smr domain
BF89_RS24535	PF00107	Zinc-binding dehydrogenase
BF89_RS24535	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS24540	PF03466	LysR substrate binding domain
BF89_RS24540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS24550	PF10901	Protein of unknown function (DUF2690)
BF89_RS24565	PF13170	Protein of unknown function (DUF4003)
BF89_RS24570	PF02567	Phenazine biosynthesis-like protein
BF89_RS24575	PF05675	Protein of unknown function (DUF817)
BF89_RS24580	PF01032	FecCD transport family
BF89_RS24585	PF01032	FecCD transport family
BF89_RS24595	PF01497	Periplasmic binding protein
BF89_RS24615	PF03600	Citrate transporter
BF89_RS24620	PF08830	Protein of unknown function (DUF1806)
BF89_RS24625	PF02585	GlcNAc-PI de-N-acetylase
BF89_RS24655	PF07690	Major Facilitator Superfamily
BF89_RS24660	PF00324	Amino acid permease
BF89_RS24665	PF00107	Zinc-binding dehydrogenase
BF89_RS24665	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS24670	PF00753	Metallo-beta-lactamase superfamily
BF89_RS24710	PF00144	Beta-lactamase
BF89_RS24735	PF01471	Putative peptidoglycan binding domain
BF89_RS24735	PF01183	Glycosyl hydrolases family 25
BF89_RS24740	PF00753	Metallo-beta-lactamase superfamily
BF89_RS24750	PF03063	Prismane/CO dehydrogenase family
BF89_RS24765	PF00005	ABC transporter
BF89_RS24765	PF13732	Domain of unknown function (DUF4162)
BF89_RS24770	PF01061	ABC-2 type transporter
BF89_RS24775	PF05656	Protein of unknown function (DUF805)
BF89_RS24795	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS24810	PF04542	Sigma-70 region 2 
BF89_RS24815	PF12791	Anti-sigma factor N-terminus
BF89_RS24825	PF01022	Bacterial regulatory protein, arsR family
BF89_RS24840	PF01638	HxlR-like helix-turn-helix
BF89_RS24850	PF00501	AMP-binding enzyme
BF89_RS24850	PF13193	AMP-binding enzyme C-terminal domain
BF89_RS24870	PF02567	Phenazine biosynthesis-like protein
BF89_RS24900	PF00248	Aldo/keto reductase family
BF89_RS24905	PF01638	HxlR-like helix-turn-helix
BF89_RS24910	PF01638	HxlR-like helix-turn-helix
BF89_RS24920	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF89_RS24920	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF89_RS24925	PF07702	UTRA domain
BF89_RS24925	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS24930	PF01638	HxlR-like helix-turn-helix
BF89_RS24940	PF03960	ArsC family
BF89_RS24970	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS24975	PF03928	Haem-degrading
BF89_RS24985	PF07690	Major Facilitator Superfamily
BF89_RS24990	PF00248	Aldo/keto reductase family
BF89_RS25010	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF89_RS25010	PF01447	Thermolysin metallopeptidase, catalytic domain
BF89_RS25010	PF03413	Peptidase propeptide and YPEB domain
BF89_RS25010	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF89_RS25015	PF00106	short chain dehydrogenase
BF89_RS25025	PF16197	Ketoacyl-synthetase C-terminal extension
BF89_RS25025	PF08659	KR domain
BF89_RS25025	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS25025	PF00698	Acyl transferase domain
BF89_RS25025	PF00550	Phosphopantetheine attachment site
BF89_RS25025	PF14765	Polyketide synthase dehydratase
BF89_RS25025	PF02801	Beta-ketoacyl synthase, C-terminal domain
BF89_RS25025	PF00109	Beta-ketoacyl synthase, N-terminal domain
BF89_RS25035	PF00296	Luciferase-like monooxygenase
BF89_RS25040	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS25040	PF00107	Zinc-binding dehydrogenase
BF89_RS25045	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
BF89_RS25045	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
BF89_RS25055	PF02780	Transketolase, C-terminal domain
BF89_RS25055	PF00456	Transketolase, thiamine diphosphate binding domain
BF89_RS25055	PF02779	Transketolase, pyrimidine binding domain
BF89_RS25060	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
BF89_RS25060	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
BF89_RS25065	PF00923	Transaldolase/Fructose-6-phosphate aldolase
BF89_RS25070	PF02447	GntP family permease
BF89_RS25075	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS25075	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS25080	PF10282	Lactonase, 7-bladed beta-propeller
BF89_RS25085	PF06906	Protein of unknown function (DUF1272)
BF89_RS25090	PF00805	Pentapeptide repeats (8 copies)
BF89_RS25095	PF00892	EamA-like transporter family
BF89_RS25100	PF13411	MerR HTH family regulatory protein
BF89_RS25105	PF03471	Transporter associated domain
BF89_RS25105	PF00571	CBS domain
BF89_RS25105	PF01595	Cyclin M transmembrane N-terminal domain
BF89_RS25115	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS25135	PF07690	Major Facilitator Superfamily
BF89_RS25145	PF08241	Methyltransferase domain
BF89_RS25165	PF01594	AI-2E family transporter
BF89_RS25170	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
BF89_RS25170	PF13288	DXP reductoisomerase C-terminal domain
BF89_RS25170	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
BF89_RS25175	PF00579	tRNA synthetases class I (W and Y)
BF89_RS25180	PF02687	FtsX-like permease family
BF89_RS25180	PF00005	ABC transporter
BF89_RS25180	PF12704	MacB-like periplasmic core domain
BF89_RS25190	PF12464	Maltose acetyltransferase 
BF89_RS25190	PF14602	Hexapeptide repeat of succinyl-transferase
BF89_RS25195	PF07690	Major Facilitator Superfamily
BF89_RS25200	PF00480	ROK family
BF89_RS25205	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS25215	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS25215	PF00293	NUDIX domain
BF89_RS25230	PF13350	Tyrosine phosphatase family
BF89_RS25240	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS25265	PF00005	ABC transporter
BF89_RS25285	PF00391	PEP-utilising enzyme, mobile domain
BF89_RS25285	PF02887	Pyruvate kinase, alpha/beta domain
BF89_RS25285	PF00224	Pyruvate kinase, barrel domain
BF89_RS25295	PF00881	Nitroreductase family
BF89_RS25300	PF01638	HxlR-like helix-turn-helix
BF89_RS25315	PF03129	Anticodon binding domain
BF89_RS25315	PF13393	Histidyl-tRNA synthetase
BF89_RS25320	PF04073	Aminoacyl-tRNA editing domain
BF89_RS25325	PF02660	Glycerol-3-phosphate acyltransferase
BF89_RS25330	PF01381	Helix-turn-helix
BF89_RS25345	PF04231	Endonuclease I
BF89_RS25350	PF03606	C4-dicarboxylate anaerobic carrier
BF89_RS25355	PF03737	Aldolase/RraA
BF89_RS25370	PF02361	Cobalt transport protein
BF89_RS25375	PF00005	ABC transporter
BF89_RS25405	PF02525	Flavodoxin-like fold
BF89_RS25415	PF02667	Short chain fatty acid transporter
BF89_RS25425	PF17440	Thiol-activated cytolysin beta sandwich domain
BF89_RS25425	PF01289	Thiol-activated cytolysin
BF89_RS25430	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS25435	PF00893	Small Multidrug Resistance protein
BF89_RS25440	PF17314	Family of unknown function (DUF5360)
BF89_RS25450	PF13396	Phospholipase_D-nuclease N-terminal
BF89_RS25455	PF13732	Domain of unknown function (DUF4162)
BF89_RS25455	PF00005	ABC transporter
BF89_RS25460	PF12679	ABC-2 family transporter protein
BF89_RS25475	PF07690	Major Facilitator Superfamily
BF89_RS25480	PF01047	MarR family
BF89_RS25485	PF12697	Alpha/beta hydrolase family
BF89_RS25490	PF07690	Major Facilitator Superfamily
BF89_RS25495	PF14044	NETI protein
BF89_RS25530	PF00395	S-layer homology domain
BF89_RS25540	PF01804	Penicillin amidase
BF89_RS25545	PF01497	Periplasmic binding protein
BF89_RS25545	PF12833	Helix-turn-helix domain
BF89_RS25555	PF07883	Cupin domain
BF89_RS25570	PF04542	Sigma-70 region 2 
BF89_RS25570	PF08281	Sigma-70, region 4
BF89_RS25585	PF00266	Aminotransferase class-V
BF89_RS25590	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BF89_RS25590	PF01842	ACT domain
BF89_RS25590	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BF89_RS25605	PF13520	Amino acid permease
BF89_RS25610	PF01037	Lrp/AsnC ligand binding domain
BF89_RS25620	PF00586	AIR synthase related protein, N-terminal domain
BF89_RS25620	PF02769	AIR synthase related protein, C-terminal domain
BF89_RS25625	PF01300	Telomere recombination
BF89_RS25625	PF17788	HypF Kae1-like domain
BF89_RS25625	PF00708	Acylphosphatase
BF89_RS25625	PF07503	HypF finger
BF89_RS25630	PF00202	Aminotransferase class-III
BF89_RS25640	PF03315	Serine dehydratase beta chain
BF89_RS25640	PF01842	ACT domain
BF89_RS25645	PF03313	Serine dehydratase alpha chain
BF89_RS25655	PF01022	Bacterial regulatory protein, arsR family
BF89_RS25665	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS25665	PF16859	Tetracyclin repressor-like, C-terminal domain
BF89_RS25670	PF07690	Major Facilitator Superfamily
BF89_RS25680	PF08453	Peptidase family M9 N-terminal
BF89_RS25680	PF01752	Collagenase
BF89_RS25680	PF18496	Collagenase G catalytic helper subdomain
BF89_RS25685	PF01554	MatE
BF89_RS25700	PF02743	Cache domain
BF89_RS25700	PF00672	HAMP domain
BF89_RS25700	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
BF89_RS25715	PF00817	impB/mucB/samB family
BF89_RS25715	PF11799	impB/mucB/samB family C-terminal domain
BF89_RS25715	PF11798	IMS family HHH motif
BF89_RS25735	PF18801	response regulator aspartate phosphatase H, N terminal
BF89_RS25740	PF00356	Bacterial regulatory proteins, lacI family
BF89_RS25750	PF05116	Sucrose-6F-phosphate phosphohydrolase
BF89_RS25755	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
BF89_RS25755	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
BF89_RS25785	PF17676	LD-carboxypeptidase C-terminal domain
BF89_RS25785	PF02016	LD-carboxypeptidase N-terminal domain
BF89_RS25795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS25795	PF03466	LysR substrate binding domain
BF89_RS25800	PF02754	Cysteine-rich domain
BF89_RS25805	PF13183	4Fe-4S dicluster domain
BF89_RS25805	PF11870	Domain of unknown function (DUF3390)
BF89_RS25805	PF02589	LUD domain
BF89_RS25810	PF02589	LUD domain
BF89_RS25815	PF07690	Major Facilitator Superfamily
BF89_RS25820	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BF89_RS25820	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
BF89_RS25825	PF04299	Putative FMN-binding domain
BF89_RS25835	PF01047	MarR family
BF89_RS25845	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS25845	PF00072	Response regulator receiver domain
BF89_RS25850	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS25850	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS25850	PF00672	HAMP domain
BF89_RS25870	PF02687	FtsX-like permease family
BF89_RS25875	PF00005	ABC transporter
BF89_RS25890	PF04072	Leucine carboxyl methyltransferase
BF89_RS25895	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
BF89_RS25895	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
BF89_RS25905	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
BF89_RS25910	PF00753	Metallo-beta-lactamase superfamily
BF89_RS25925	PF01381	Helix-turn-helix
BF89_RS25950	PF00291	Pyridoxal-phosphate dependent enzyme
BF89_RS25980	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS25980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS25980	PF00672	HAMP domain
BF89_RS25985	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS25985	PF00072	Response regulator receiver domain
BF89_RS26010	PF07690	Major Facilitator Superfamily
BF89_RS26020	PF00667	FAD binding domain
BF89_RS26020	PF00258	Flavodoxin
BF89_RS26020	PF00175	Oxidoreductase NAD-binding domain 
BF89_RS26020	PF00067	Cytochrome P450
BF89_RS26025	PF12802	MarR family
BF89_RS26040	PF01609	Transposase DDE domain
BF89_RS26045	PF00144	Beta-lactamase
BF89_RS26055	PF12833	Helix-turn-helix domain
BF89_RS26055	PF02805	Metal binding domain of Ada
BF89_RS26065	PF01609	Transposase DDE domain
BF89_RS26075	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS26090	PF01037	Lrp/AsnC ligand binding domain
BF89_RS26105	PF00012	Hsp70 protein
BF89_RS26120	PF01022	Bacterial regulatory protein, arsR family
BF89_RS26125	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BF89_RS26130	PF01758	Sodium Bile acid symporter family
BF89_RS26135	PF01451	Low molecular weight phosphotyrosine protein phosphatase
BF89_RS26160	PF00005	ABC transporter
BF89_RS26165	PF00950	ABC 3 transport family
BF89_RS26170	PF01297	Zinc-uptake complex component A periplasmic
BF89_RS26175	PF00561	alpha/beta hydrolase fold
BF89_RS26180	PF01040	UbiA prenyltransferase family
BF89_RS26190	PF10057	Uncharacterized conserved protein (DUF2294)
BF89_RS26195	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
BF89_RS26195	PF00361	Proton-conducting membrane transporter
BF89_RS26200	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
BF89_RS26210	PF00875	DNA photolyase
BF89_RS26210	PF03441	FAD binding domain of DNA photolyase
BF89_RS26215	PF03073	TspO/MBR family
BF89_RS26230	PF11181	Heat induced stress protein YflT
BF89_RS26245	PF01544	CorA-like Mg2+ transporter protein
BF89_RS26255	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
BF89_RS26255	PF03466	LysR substrate binding domain
BF89_RS26275	PF00857	Isochorismatase family
BF89_RS26280	PF00561	alpha/beta hydrolase fold
BF89_RS26285	PF06628	Catalase-related immune-responsive
BF89_RS26285	PF00199	Catalase
BF89_RS26290	PF17936	Bacterial Ig domain
BF89_RS26290	PF00149	Calcineurin-like phosphoesterase
BF89_RS26290	PF02872	5'-nucleotidase, C-terminal domain
BF89_RS26315	PF01235	Sodium:alanine symporter family
BF89_RS26320	PF04960	Glutaminase
BF89_RS26330	PF08664	YcbB domain
BF89_RS26330	PF00072	Response regulator receiver domain
BF89_RS26335	PF03323	Bacillus/Clostridium GerA spore germination protein
BF89_RS26340	PF03845	Spore germination protein
BF89_RS26345	PF05504	Spore germination B3/ GerAC like, C-terminal 
BF89_RS26355	PF00390	Malic enzyme, N-terminal domain
BF89_RS26355	PF03949	Malic enzyme, NAD binding domain
BF89_RS26360	PF13564	DoxX-like family
BF89_RS26365	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF89_RS26365	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF89_RS26370	PF05525	Branched-chain amino acid transport protein
BF89_RS26375	PF13520	Amino acid permease
BF89_RS26380	PF08459	UvrC Helix-hairpin-helix N-terminal
BF89_RS26380	PF02151	UvrB/uvrC motif
BF89_RS26380	PF12826	Helix-hairpin-helix motif
BF89_RS26380	PF01541	GIY-YIG catalytic domain
BF89_RS26390	PF01381	Helix-turn-helix
BF89_RS26395	PF17763	Glutaminase/Asparaginase C-terminal domain
BF89_RS26395	PF00710	Asparaginase, N-terminal
BF89_RS26400	PF10415	Fumarase C C-terminus
BF89_RS26400	PF00206	Lyase
BF89_RS26415	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS26415	PF13823	Alcohol dehydrogenase GroES-associated
BF89_RS26415	PF00107	Zinc-binding dehydrogenase
BF89_RS26420	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS26425	PF11553	Protein of unknown function (DUF3231)
BF89_RS26430	PF10710	Protein of unknown function (DUF2512)
BF89_RS26435	PF00269	Small, acid-soluble spore proteins, alpha/beta type
BF89_RS26450	PF01810	LysE type translocator
BF89_RS26455	PF08892	YqcI/YcgG family
BF89_RS26460	PF07875	Coat F domain
BF89_RS26475	PF00753	Metallo-beta-lactamase superfamily
BF89_RS26480	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
BF89_RS26480	PF00391	PEP-utilising enzyme, mobile domain
BF89_RS26485	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS26495	PF02915	Rubrerythrin
BF89_RS26510	PF07670	Nucleoside recognition
BF89_RS26530	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
BF89_RS26530	PF02770	Acyl-CoA dehydrogenase, middle domain
BF89_RS26530	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
BF89_RS26545	PF07454	Stage II sporulation protein P (SpoIIP)
BF89_RS26550	PF03932	CutC family
BF89_RS26555	PF10502	Signal peptidase, peptidase S26 
BF89_RS26560	PF01614	Bacterial transcriptional regulator
BF89_RS26560	PF09339	IclR helix-turn-helix domain
BF89_RS26565	PF02682	Carboxyltransferase domain, subdomain C and D
BF89_RS26575	PF03746	LamB/YcsF family
BF89_RS26600	PF02146	Sir2 family
BF89_RS26610	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS26610	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS26615	PF10502	Signal peptidase, peptidase S26 
BF89_RS26625	PF00293	NUDIX domain
BF89_RS26645	PF10898	Protein of unknown function (DUF2716)
BF89_RS26650	PF08713	DNA alkylation repair enzyme
BF89_RS26660	PF00324	Amino acid permease
BF89_RS26665	PF13302	Acetyltransferase (GNAT) domain
BF89_RS26670	PF01925	Sulfite exporter TauE/SafE
BF89_RS26700	PF00561	alpha/beta hydrolase fold
BF89_RS26705	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS26705	PF00072	Response regulator receiver domain
BF89_RS26710	PF00672	HAMP domain
BF89_RS26710	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS26720	PF13031	Protein of unknown function (DUF3892)
BF89_RS26725	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
BF89_RS26730	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS26730	PF00155	Aminotransferase class I and II
BF89_RS26735	PF00892	EamA-like transporter family
BF89_RS26750	PF00583	Acetyltransferase (GNAT) family
BF89_RS26755	PF12833	Helix-turn-helix domain
BF89_RS26780	PF12704	MacB-like periplasmic core domain
BF89_RS26780	PF00005	ABC transporter
BF89_RS26780	PF02687	FtsX-like permease family
BF89_RS26790	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS26795	PF00005	ABC transporter
BF89_RS26810	PF00293	NUDIX domain
BF89_RS26820	PF00679	Elongation factor G C-terminus
BF89_RS26820	PF03764	Elongation factor G, domain IV
BF89_RS26820	PF00009	Elongation factor Tu GTP binding domain
BF89_RS26820	PF14492	Elongation Factor G, domain II
BF89_RS26825	PF01047	MarR family
BF89_RS26830	PF00881	Nitroreductase family
BF89_RS26840	PF07726	ATPase family associated with various cellular activities (AAA)
BF89_RS26840	PF17863	AAA lid domain
BF89_RS26860	PF00144	Beta-lactamase
BF89_RS26865	PF13382	Adenine deaminase C-terminal domain
BF89_RS26865	PF01979	Amidohydrolase family
BF89_RS26875	PF00199	Catalase
BF89_RS26875	PF06628	Catalase-related immune-responsive
BF89_RS26880	PF00202	Aminotransferase class-III
BF89_RS26890	PF00535	Glycosyl transferase family 2
BF89_RS26900	PF00535	Glycosyl transferase family 2
BF89_RS26925	PF07690	Major Facilitator Superfamily
BF89_RS26940	PF17863	AAA lid domain
BF89_RS26940	PF07726	ATPase family associated with various cellular activities (AAA)
BF89_RS26960	PF12681	Glyoxalase-like domain
BF89_RS26965	PF13302	Acetyltransferase (GNAT) domain
BF89_RS26975	PF04397	LytTr DNA-binding domain
BF89_RS26975	PF00072	Response regulator receiver domain
BF89_RS26985	PF10086	YhfC intramembrane metalloprotease
BF89_RS27000	PF13443	Cro/C1-type HTH DNA-binding domain
BF89_RS27005	PF11188	Protein of unknown function (DUF2975)
BF89_RS27010	PF00245	Alkaline phosphatase
BF89_RS27015	PF00487	Fatty acid desaturase
BF89_RS27020	PF01139	tRNA-splicing ligase RtcB
BF89_RS27025	PF00324	Amino acid permease
BF89_RS27030	PF09339	IclR helix-turn-helix domain
BF89_RS27030	PF01614	Bacterial transcriptional regulator
BF89_RS27035	PF01546	Peptidase family M20/M25/M40
BF89_RS27040	PF03807	NADP oxidoreductase coenzyme F420-dependent
BF89_RS27040	PF14748	Pyrroline-5-carboxylate reductase dimerisation
BF89_RS27045	PF00696	Amino acid kinase family
BF89_RS27045	PF01472	PUA domain
BF89_RS27050	PF00171	Aldehyde dehydrogenase family
BF89_RS27055	PF01773	Na+ dependent nucleoside transporter N-terminus
BF89_RS27055	PF07662	Na+ dependent nucleoside transporter C-terminus
BF89_RS27075	PF03992	Antibiotic biosynthesis monooxygenase
BF89_RS27095	PF01791	DeoC/LacD family aldolase
BF89_RS27105	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
BF89_RS27105	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
BF89_RS27110	PF00325	Bacterial regulatory proteins, crp family
BF89_RS27110	PF04198	Putative sugar-binding domain
BF89_RS27115	PF00005	ABC transporter
BF89_RS27120	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS27125	PF02653	Branched-chain amino acid transport system / permease component
BF89_RS27130	PF13407	Periplasmic binding protein domain
BF89_RS27135	PF06039	Malate:quinone oxidoreductase (Mqo)
BF89_RS27155	PF04542	Sigma-70 region 2 
BF89_RS27155	PF08281	Sigma-70, region 4
BF89_RS27165	PF06725	3D domain
BF89_RS27165	PF01476	LysM domain
BF89_RS27180	PF01636	Phosphotransferase enzyme family
BF89_RS27200	PF00793	DAHP synthetase I family
BF89_RS27200	PF01817	Chorismate mutase type II
BF89_RS27205	PF01264	Chorismate synthase
BF89_RS27210	PF00155	Aminotransferase class I and II
BF89_RS27215	PF02153	Prephenate dehydrogenase
BF89_RS27215	PF01842	ACT domain
BF89_RS27220	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
BF89_RS27230	PF16295	Tetracyclin repressor-like, C-terminal domain
BF89_RS27230	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS27235	PF03176	MMPL family
BF89_RS27240	PF03176	MMPL family
BF89_RS27250	PF00005	ABC transporter
BF89_RS27250	PF12848	ABC transporter
BF89_RS27255	PF00884	Sulfatase
BF89_RS27260	PF03741	Integral membrane protein TerC family
BF89_RS27270	PF01522	Polysaccharide deacetylase
BF89_RS27300	PF12867	DinB superfamily
BF89_RS27305	PF13536	Putative multidrug resistance efflux transporter
BF89_RS27330	PF02522	Aminoglycoside 3-N-acetyltransferase
BF89_RS27350	PF00293	NUDIX domain
BF89_RS27350	PF09297	NADH pyrophosphatase zinc ribbon domain
BF89_RS27370	PF00005	ABC transporter
BF89_RS27375	PF09084	NMT1/THI5 like
BF89_RS27380	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS27385	PF00296	Luciferase-like monooxygenase
BF89_RS27400	PF01594	AI-2E family transporter
BF89_RS27450	PF00005	ABC transporter
BF89_RS27470	PF03630	Fumble 
BF89_RS27475	PF07977	FabA-like domain
BF89_RS27480	PF00155	Aminotransferase class I and II
BF89_RS27515	PF08241	Methyltransferase domain
BF89_RS27525	PF01156	Inosine-uridine preferring nucleoside hydrolase
BF89_RS27530	PF04226	Transglycosylase associated protein
BF89_RS27550	PF07690	Major Facilitator Superfamily
BF89_RS27555	PF12793	Sugar transport-related sRNA regulator N-term
BF89_RS27555	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS27560	PF13171	Protein of unknown function (DUF4004)
BF89_RS27565	PF04519	Polymer-forming cytoskeletal
BF89_RS27575	PF07690	Major Facilitator Superfamily
BF89_RS27595	PF02645	Uncharacterised protein, DegV family COG1307
BF89_RS27605	PF03808	Glycosyl transferase WecB/TagA/CpsF family
BF89_RS27615	PF01048	Phosphorylase superfamily
BF89_RS27635	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS27635	PF00072	Response regulator receiver domain
BF89_RS27640	PF16736	Single Cache-like 
BF89_RS27640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS27640	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS27640	PF00989	PAS fold
BF89_RS27645	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BF89_RS27645	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
BF89_RS27670	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
BF89_RS27685	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
BF89_RS27685	PF13378	Enolase C-terminal domain-like
BF89_RS27690	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
BF89_RS27690	PF00877	NlpC/P60 family
BF89_RS27695	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
BF89_RS27700	PF00117	Glutamine amidotransferase class-I
BF89_RS27700	PF00958	GMP synthase C terminal domain
BF89_RS27700	PF03352	Methyladenine glycosylase
BF89_RS27700	PF13302	Acetyltransferase (GNAT) domain
BF89_RS27700	PF13673	Acetyltransferase (GNAT) domain
BF89_RS27705	PF04914	DltD protein
BF89_RS27720	PF09335	SNARE associated Golgi protein
BF89_RS27725	PF08876	Domain of unknown function (DUF1836)
BF89_RS27740	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS27740	PF04324	BFD-like [2Fe-2S] binding domain
BF89_RS27755	PF00158	Sigma-54 interaction domain
BF89_RS27755	PF13188	PAS domain
BF89_RS27755	PF02954	Bacterial regulatory protein, Fis family
BF89_RS27760	PF01266	FAD dependent oxidoreductase
BF89_RS27765	PF05544	Proline racemase
BF89_RS27770	PF05544	Proline racemase
BF89_RS27775	PF00701	Dihydrodipicolinate synthetase family
BF89_RS27780	PF00171	Aldehyde dehydrogenase family
BF89_RS27785	PF01235	Sodium:alanine symporter family
BF89_RS27790	PF02627	Carboxymuconolactone decarboxylase family
BF89_RS27800	PF18416	N-acetylglucosamine binding protein domain 2
BF89_RS27800	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
BF89_RS27805	PF02833	DHHA2 domain
BF89_RS27805	PF01368	DHH family
BF89_RS27855	PF00570	HRDC domain
BF89_RS27855	PF00270	DEAD/DEAH box helicase
BF89_RS27855	PF00271	Helicase conserved C-terminal domain
BF89_RS27855	PF09382	RQC domain
BF89_RS27855	PF16124	RecQ zinc-binding
BF89_RS27860	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
BF89_RS27875	PF13538	UvrD-like helicase C-terminal domain
BF89_RS27925	PF03772	Competence protein
BF89_RS27925	PF13567	Domain of unknown function (DUF4131)
BF89_RS27925	PF00753	Metallo-beta-lactamase superfamily
BF89_RS27955	PF10990	Protein of unknown function (DUF2809)
BF89_RS27970	PF18416	N-acetylglucosamine binding protein domain 2
BF89_RS27970	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
BF89_RS27975	PF13673	Acetyltransferase (GNAT) domain
BF89_RS27980	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BF89_RS27995	PF00574	Clp protease
BF89_RS28000	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
BF89_RS28005	PF00005	ABC transporter
BF89_RS28005	PF00571	CBS domain
BF89_RS28010	PF00528	Binding-protein-dependent transport system inner membrane component
BF89_RS28045	PF04229	GrpB protein
BF89_RS28045	PF13673	Acetyltransferase (GNAT) domain
BF89_RS28050	PF00106	short chain dehydrogenase
BF89_RS28060	PF00676	Dehydrogenase E1 component
BF89_RS28065	PF02780	Transketolase, C-terminal domain
BF89_RS28065	PF02779	Transketolase, pyrimidine binding domain
BF89_RS28070	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
BF89_RS28070	PF00364	Biotin-requiring enzyme
BF89_RS28070	PF02817	e3 binding domain
BF89_RS28075	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS28075	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS28090	PF02082	Transcriptional regulator
BF89_RS28095	PF00403	Heavy-metal-associated domain
BF89_RS28095	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BF89_RS28095	PF07992	Pyridine nucleotide-disulphide oxidoreductase
BF89_RS28110	PF08220	DeoR-like helix-turn-helix domain
BF89_RS28110	PF00455	DeoR C terminal sensor domain
BF89_RS28130	PF01590	GAF domain
BF89_RS28130	PF00158	Sigma-54 interaction domain
BF89_RS28130	PF02954	Bacterial regulatory protein, Fis family
BF89_RS28155	PF00293	NUDIX domain
BF89_RS28155	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS28160	PF08359	YsiA-like protein, C-terminal region
BF89_RS28160	PF00440	Bacterial regulatory proteins, tetR family
BF89_RS28165	PF00266	Aminotransferase class-V
BF89_RS28170	PF04199	Putative cyclase
BF89_RS28175	PF03301	Tryptophan 2,3-dioxygenase
BF89_RS28190	PF01471	Putative peptidoglycan binding domain
BF89_RS28190	PF07486	Cell Wall Hydrolase
BF89_RS28195	PF03413	Peptidase propeptide and YPEB domain
BF89_RS28195	PF14620	YpeB sporulation
BF89_RS28200	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
BF89_RS28215	PF06081	Aromatic acid exporter family member 1
BF89_RS28240	PF00561	alpha/beta hydrolase fold
BF89_RS28245	PF00155	Aminotransferase class I and II
BF89_RS28245	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS28250	PF00892	EamA-like transporter family
BF89_RS28255	PF08299	Bacterial dnaA protein helix-turn-helix
BF89_RS28255	PF00308	Bacterial dnaA  protein
BF89_RS28255	PF11638	DnaA N-terminal domain
BF89_RS28260	PF00344	SecY translocase
BF89_RS28280	PF02868	Thermolysin metallopeptidase, alpha-helical domain
BF89_RS28280	PF03413	Peptidase propeptide and YPEB domain
BF89_RS28280	PF07504	Fungalysin/Thermolysin Propeptide Motif
BF89_RS28280	PF01447	Thermolysin metallopeptidase, catalytic domain
BF89_RS28285	PF00128	Alpha amylase, catalytic domain
BF89_RS28285	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
BF89_RS28285	PF03714	Bacterial pullanase-associated domain
BF89_RS28300	PF00282	Pyridoxal-dependent decarboxylase conserved domain
BF89_RS28305	PF07859	alpha/beta hydrolase fold
BF89_RS28320	PF13419	Haloacid dehalogenase-like hydrolase
BF89_RS28345	PF01266	FAD dependent oxidoreductase
BF89_RS28385	PF01541	GIY-YIG catalytic domain
BF89_RS28395	PF02673	Bacitracin resistance protein BacA
BF89_RS28410	PF12867	DinB superfamily
BF89_RS28420	PF08000	Bacterial PH domain
BF89_RS28425	PF01734	Patatin-like phospholipase
BF89_RS28455	PF09234	Domain of unknown function (DUF1963)
BF89_RS28475	PF12706	Beta-lactamase superfamily domain
BF89_RS28490	PF00293	NUDIX domain
BF89_RS28495	PF02768	DNA polymerase III beta subunit, C-terminal domain
BF89_RS28495	PF02767	DNA polymerase III beta subunit, central domain
BF89_RS28495	PF00712	DNA polymerase III beta subunit, N-terminal domain
BF89_RS28500	PF00293	NUDIX domain
BF89_RS28500	PF09297	NADH pyrophosphatase zinc ribbon domain
BF89_RS28515	PF07690	Major Facilitator Superfamily
BF89_RS28525	PF00144	Beta-lactamase
BF89_RS28535	PF00293	NUDIX domain
BF89_RS28535	PF13344	Haloacid dehalogenase-like hydrolase
BF89_RS28545	PF01270	Glycosyl hydrolases family 8
BF89_RS28550	PF00892	EamA-like transporter family
BF89_RS28570	PF03009	Glycerophosphoryl diester phosphodiesterase family
BF89_RS28585	PF07690	Major Facilitator Superfamily
BF89_RS28595	PF01609	Transposase DDE domain
BF89_RS28600	PF00144	Beta-lactamase
BF89_RS28615	PF01965	DJ-1/PfpI family
BF89_RS28650	PF00144	Beta-lactamase
BF89_RS28650	PF11954	Domain of unknown function (DUF3471)
BF89_RS28660	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS28660	PF03793	PASTA domain
BF89_RS28660	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS28665	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS28665	PF00107	Zinc-binding dehydrogenase
BF89_RS28670	PF04229	GrpB protein
BF89_RS28680	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS28680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS28690	PF00005	ABC transporter
BF89_RS28690	PF12558	ATP-binding cassette cobalt transporter
BF89_RS28695	PF07155	ECF-type riboflavin transporter, S component
BF89_RS28700	PF01177	Asp/Glu/Hydantoin racemase
BF89_RS28705	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
BF89_RS28710	PF00905	Penicillin binding protein transpeptidase domain
BF89_RS28710	PF03717	Penicillin-binding Protein dimerisation domain
BF89_RS28715	PF13426	PAS domain
BF89_RS28715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS28715	PF00989	PAS fold
BF89_RS28715	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS28715	PF13188	PAS domain
BF89_RS28735	PF00067	Cytochrome P450
BF89_RS28750	PF07561	Domain of Unknown Function (DUF1540)
BF89_RS28755	PF00132	Bacterial transferase hexapeptide (six repeats)
BF89_RS28765	PF00067	Cytochrome P450
BF89_RS28840	PF03070	TENA/THI-4/PQQC family
BF89_RS28845	PF01820	D-ala D-ala ligase N-terminus
BF89_RS28845	PF07478	D-ala D-ala ligase C-terminus
BF89_RS28850	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS28850	PF00155	Aminotransferase class I and II
BF89_RS28855	PF03447	Homoserine dehydrogenase, NAD binding domain
BF89_RS28855	PF00742	Homoserine dehydrogenase
BF89_RS28855	PF01842	ACT domain
BF89_RS28880	PF00005	ABC transporter
BF89_RS28895	PF00005	ABC transporter
BF89_RS28895	PF12848	ABC transporter
BF89_RS28910	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS28910	PF00072	Response regulator receiver domain
BF89_RS28920	PF07486	Cell Wall Hydrolase
BF89_RS28935	PF01225	Mur ligase family, catalytic domain
BF89_RS28935	PF08245	Mur ligase middle domain
BF89_RS28935	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS28940	PF01225	Mur ligase family, catalytic domain
BF89_RS28940	PF08245	Mur ligase middle domain
BF89_RS28940	PF02875	Mur ligase family, glutamate ligase domain
BF89_RS28955	PF08240	Alcohol dehydrogenase GroES-like domain
BF89_RS28955	PF00107	Zinc-binding dehydrogenase
BF89_RS28970	PF00392	Bacterial regulatory proteins, gntR family
BF89_RS28970	PF00155	Aminotransferase class I and II
BF89_RS28985	PF12833	Helix-turn-helix domain
BF89_RS28990	PF01636	Phosphotransferase enzyme family
BF89_RS29010	PF07690	Major Facilitator Superfamily
BF89_RS29015	PF09278	MerR, DNA binding
BF89_RS29015	PF00376	MerR family regulatory protein
BF89_RS29020	PF00144	Beta-lactamase
BF89_RS29035	PF17755	UvrA DNA-binding domain
BF89_RS29035	PF17760	UvrA interaction domain
BF89_RS29035	PF17755	UvrA DNA-binding domain
BF89_RS29035	PF17760	UvrA interaction domain
BF89_RS29075	PF01048	Phosphorylase superfamily
BF89_RS29080	PF13021	Domain of unknown function (DUF3885)
BF89_RS29085	PF01966	HD domain
BF89_RS29090	PF00072	Response regulator receiver domain
BF89_RS29090	PF00486	Transcriptional regulatory protein, C terminal
BF89_RS29095	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
BF89_RS29095	PF00512	His Kinase A (phospho-acceptor) domain
BF89_RS29100	PF07943	Penicillin-binding protein 5, C-terminal domain
BF89_RS29100	PF00768	D-alanyl-D-alanine carboxypeptidase
BF89_RS29105	PF05163	DinB family
BF89_RS29115	PF00485	Phosphoribulokinase / Uridine kinase family
BF89_RS29120	PF00583	Acetyltransferase (GNAT) family
BF89_RS29170	PF02733	Dak1 domain
